BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012577
(460 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224089975|ref|XP_002308888.1| predicted protein [Populus trichocarpa]
gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/460 (72%), Positives = 399/460 (86%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ A D+S+ S L K+ EG DL R EI+ AM NLR RRM+G+ALQLSEW E NK +F+E
Sbjct: 96 VSASDVSVQSVLDKWVAEGKDLDRLEISNAMINLRKRRMFGRALQLSEWFEANKPQEFVE 155
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS LDLIAK+RGL KAE YI KIP+SF+GEV+YRTLLANCV +NVKKAEEVFN+M+
Sbjct: 156 RDYASRLDLIAKVRGLHKAEVYIDKIPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMR 215
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D FP+T FACNQLL+LYKRLDKKK+ADVLLLMEKENVK + F+YKILID KGQSND+TG
Sbjct: 216 DLEFPITPFACNQLLLLYKRLDKKKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTG 275
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
MDQ+VE MK+EGIEPD TQAI+A+HYVSGG KEKAEA+LKEMEG NL+EHRW CR +LP
Sbjct: 276 MDQIVETMKAEGIEPDIRTQAIMARHYVSGGLKEKAEAILKEMEGGNLEEHRWACRFMLP 335
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LY LGKAD+V+R+WK CE +P LD CMAAIEAWG+L K++EAEAVF+ MSKTWKKLS++
Sbjct: 336 LYGALGKADEVSRVWKFCEKSPRLDECMAAIEAWGRLKKIDEAEAVFELMSKTWKKLSSR 395
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
HY+ LLKVYA+HKMLSKGKDL+K+M +SGC IGPL WDALVKL+VE GEVEKADSIL KA
Sbjct: 396 HYSTLLKVYANHKMLSKGKDLIKRMGDSGCRIGPLTWDALVKLYVEAGEVEKADSILNKA 455
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
QQNK KPM+SS+++IM++YA +GDIH+ EK+FHRMRQ GY AR +QFQTL+QAYI AK
Sbjct: 456 VQQNKIKPMYSSFLIIMERYATKGDIHNAEKMFHRMRQAGYQARIRQFQTLIQAYIIAKA 515
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
P YG+R+R++AD +FPNK+LAAQ+AQVDAFR+TAVS+LLD
Sbjct: 516 PCYGMRERLKADGIFPNKSLAAQLAQVDAFRRTAVSDLLD 555
>gi|225441211|ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/460 (72%), Positives = 398/460 (86%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
M A D IHS L K+ +EG D+SRAEIA M NLR RM+ KALQ SEW+E +KKLD +E
Sbjct: 128 MAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVE 187
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS +DLIAK+RGLQKAE YI+KIP+SFRGE+VYRTLLANCV+ N KKAEEVFN+MK
Sbjct: 188 RDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMK 247
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFP+T+FACNQLL+LYKR+DKKK+ADVLLLMEKE+VK + F+Y +LID KGQSND+TG
Sbjct: 248 DLGFPITTFACNQLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITG 307
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M+Q+VE MK+EGIEP+ Q+IL +HYV GG KEKAEA+LKEMEG NLKE+RW CR+LLP
Sbjct: 308 MEQIVETMKAEGIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVCRVLLP 367
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
YA LGKAD V RIWK+CESNP L +AAIEA+GKL KVEEAEA+F +MSKT+K+LS+K
Sbjct: 368 PYAALGKADDVERIWKVCESNPRLPEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSK 427
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
HY+ALLKVYADHKML KGKDLVKQM++SGC IGPL WDALVKL+VE GEVEKAD IL KA
Sbjct: 428 HYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKA 487
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
QQ+ KPMFS+YM IMDQYAKRGDIH++EK+FH+MRQ GYV+R +QFQ L+QAY+NAK
Sbjct: 488 MQQSPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAKA 547
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
PAYGI++RM+ADN+FPN+ +A Q+AQVDAFRK+AVS+LLD
Sbjct: 548 PAYGIKERMKADNIFPNRVVAGQLAQVDAFRKSAVSDLLD 587
>gi|297739953|emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/460 (72%), Positives = 398/460 (86%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
M A D IHS L K+ +EG D+SRAEIA M NLR RM+ KALQ SEW+E +KKLD +E
Sbjct: 165 MAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVE 224
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS +DLIAK+RGLQKAE YI+KIP+SFRGE+VYRTLLANCV+ N KKAEEVFN+MK
Sbjct: 225 RDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMK 284
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFP+T+FACNQLL+LYKR+DKKK+ADVLLLMEKE+VK + F+Y +LID KGQSND+TG
Sbjct: 285 DLGFPITTFACNQLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITG 344
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M+Q+VE MK+EGIEP+ Q+IL +HYV GG KEKAEA+LKEMEG NLKE+RW CR+LLP
Sbjct: 345 MEQIVETMKAEGIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVCRVLLP 404
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
YA LGKAD V RIWK+CESNP L +AAIEA+GKL KVEEAEA+F +MSKT+K+LS+K
Sbjct: 405 PYAALGKADDVERIWKVCESNPRLPEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSK 464
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
HY+ALLKVYADHKML KGKDLVKQM++SGC IGPL WDALVKL+VE GEVEKAD IL KA
Sbjct: 465 HYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKA 524
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
QQ+ KPMFS+YM IMDQYAKRGDIH++EK+FH+MRQ GYV+R +QFQ L+QAY+NAK
Sbjct: 525 MQQSPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAKA 584
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
PAYGI++RM+ADN+FPN+ +A Q+AQVDAFRK+AVS+LLD
Sbjct: 585 PAYGIKERMKADNIFPNRVVAGQLAQVDAFRKSAVSDLLD 624
>gi|224137686|ref|XP_002322619.1| predicted protein [Populus trichocarpa]
gi|222867249|gb|EEF04380.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/460 (70%), Positives = 393/460 (85%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ AP +S+HS L K+ EG DL + EI+ AM NLR RR++G+ALQLSEW+E NK+ DF E
Sbjct: 13 ISAPGVSVHSVLDKWVAEGRDLDQLEISNAMFNLRKRRLFGRALQLSEWVEANKRKDFDE 72
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS LDLIAK+RGLQKAE YI+KIP+S +GEV+YRTLLANCV+ NN KKA EVFN+MK
Sbjct: 73 RDYASRLDLIAKVRGLQKAEVYIEKIPKSLKGEVIYRTLLANCVSANNAKKAVEVFNKMK 132
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D P+T F+ NQLL+LYKR DKKK+ADVLL MEKENVK + F+Y +LID KGQSND+ G
Sbjct: 133 DLELPITLFSYNQLLLLYKRHDKKKIADVLLSMEKENVKPSLFTYILLIDTKGQSNDIAG 192
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M+Q+ E MK+EGIEPD TQAI+A+HYVSGG KEKAE +LKEMEG NL+EHRW C+ +LP
Sbjct: 193 MEQIAETMKAEGIEPDIKTQAIMARHYVSGGLKEKAEIVLKEMEGGNLEEHRWACQFMLP 252
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LY LGKAD+V+R+WK C+ +P LD CMAAIEAWG+L K+ EAEAVF+ MSKTWKKLS+K
Sbjct: 253 LYGTLGKADEVSRLWKFCKKSPRLDECMAAIEAWGQLKKIPEAEAVFELMSKTWKKLSSK 312
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
HY+ALLKVYA++KMLSKGKDL+KQM +SGC IGPL WDAL+KL+VE GEVEKADSIL KA
Sbjct: 313 HYSALLKVYANNKMLSKGKDLIKQMGDSGCRIGPLTWDALIKLYVEAGEVEKADSILNKA 372
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
QQN+ KPMFSSYM+IM++YAK+GDIH+ EK+FHRMRQ GY AR KQFQTL+QAYINAK
Sbjct: 373 VQQNQMKPMFSSYMIIMEKYAKKGDIHNAEKMFHRMRQAGYQARSKQFQTLIQAYINAKA 432
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
P YG+R+R++AD +F NKA+AAQ++QVDAF++T VS+LLD
Sbjct: 433 PCYGMRERLKADGLFANKAMAAQLSQVDAFKRTVVSDLLD 472
>gi|357509403|ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/460 (64%), Positives = 385/460 (83%), Gaps = 1/460 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
M+ +I++ L K+ E+G +LSR EI+L M NLR R++Y KALQLSEWLE+ K L+F+E
Sbjct: 165 MNGTGPTIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVE 224
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS LDLIAKL GL KAE YI+KIPESFRGE++YRTLLANCV NN+KKAEE+FN+MK
Sbjct: 225 RDYASQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMK 284
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D FP+T FACNQLL+LYKR DKKK+ADVLLLME+ENVK + ++KILID+KGQSND+ G
Sbjct: 285 DLEFPLTPFACNQLLLLYKRTDKKKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDG 344
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
MDQ+V+ M++EGIEPD+ T+A+L HY+SGG +KA+ +LKEMEG+NLKE+RW CRLLL
Sbjct: 345 MDQIVDQMRAEGIEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRLLLA 404
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA+LG AD+V R+WK+CE+ P ++ C+AAIEAWGKL K++EAEAVF+ M++ W KL++K
Sbjct: 405 LYAKLGMADEVGRVWKVCETRPSVEDCVAAIEAWGKLKKIDEAEAVFEVMARKW-KLTSK 463
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+ + LL VYA++KML+KGKDL+K+MA GC IGPL W+ALVKL+V+ GEVEKADS+L KA
Sbjct: 464 NCSVLLNVYANNKMLTKGKDLIKRMAHKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKA 523
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
QQ+ +P+FSSY ++++Y+KRGDIH++EKIF+RM+Q GY++R KQ+Q L++AY A
Sbjct: 524 IQQSPVRPIFSSYNTLLEEYSKRGDIHNSEKIFYRMKQAGYISRLKQYQILIEAYRRANV 583
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
PAYGIRDR++ADNVFPNK LA + QVD F+KT S+LLD
Sbjct: 584 PAYGIRDRLKADNVFPNKTLANLLVQVDGFKKTQASDLLD 623
>gi|356498381|ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 609
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 307/459 (66%), Positives = 385/459 (83%), Gaps = 1/459 (0%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+AP +S+ S L K+ E G +LSR EI LA+ LR R+MYG+A QL +WLE+NKKL+F+E
Sbjct: 152 NAPGLSVDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLFQWLESNKKLEFMES 211
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
DYAS LDLIAKLRGL KAE YI+ +PESFRGE++YRTLLANC + NN+ E++FN+MKD
Sbjct: 212 DYASQLDLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLIATEKIFNKMKD 271
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
P+T+FACNQLL+LYK+LDKKK+ADVLLLMEKENVK + F+Y+ILID KGQSND+ GM
Sbjct: 272 LDLPLTAFACNQLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRILIDSKGQSNDIAGM 331
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+QV E MK EG EPD QA+LA+HY S G KEKAEAMLKEMEG+NLKE++W C LL L
Sbjct: 332 EQVFETMKEEGFEPDIQIQALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVCATLLRL 391
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
YA LGKAD+V RIWK+CES P ++ C+AA+EAWGKLNK+EEAEAVF+ +SK W KL++K+
Sbjct: 392 YANLGKADEVERIWKVCESKPRVEDCLAAVEAWGKLNKIEEAEAVFEMVSKKW-KLNSKN 450
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y+ LLK+YA++KML+KGK+LVK MA+SG IGPL WDALVKL+++ GEVEKADSIL KA
Sbjct: 451 YSVLLKIYANNKMLTKGKELVKLMADSGVRIGPLTWDALVKLYIQAGEVEKADSILHKAI 510
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
QQN+ +PMF++Y+ I++QYAKRGD+H++EKIF +MRQ GY +R QFQ L+QAY+NAK P
Sbjct: 511 QQNQLQPMFTTYLAILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQFQVLIQAYVNAKVP 570
Query: 422 AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
AYGIR+R++ADN+FPNK LA Q+A VDAFRK AVS+LLD
Sbjct: 571 AYGIRERIKADNLFPNKTLANQLALVDAFRKNAVSDLLD 609
>gi|297842839|ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
gi|297335142|gb|EFH65560.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 289/460 (62%), Positives = 378/460 (82%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ AP +SI S L K+ EEGN+++R E+A AM LR RRMYG+ALQLSEWLE NKK++ E
Sbjct: 138 VSAPGLSIGSALDKWVEEGNEITRVEVAKAMLQLRRRRMYGRALQLSEWLEANKKIEMNE 197
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDY+S LDL K+RGL+ E+Y+QKIP+SF+GEV+YRTLLANCVA NVKK+E VFNRMK
Sbjct: 198 RDYSSRLDLTVKIRGLENGEAYMQKIPKSFKGEVIYRTLLANCVAAGNVKKSELVFNRMK 257
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFP++ F C+Q+L+LYKR+D+KK+ADVLLLMEKENVK + +YKILID+KG +ND++G
Sbjct: 258 DLGFPLSGFTCDQMLLLYKRIDRKKIADVLLLMEKENVKPSLLTYKILIDVKGATNDISG 317
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M+Q++E MK EG++PD TQA+ AKHY G KEKAE +LKEMEG++L+ +R + LL
Sbjct: 318 MEQILETMKDEGVQPDFQTQALTAKHYSGAGLKEKAEKVLKEMEGESLEANRRAFKDLLS 377
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
+YA LG+ D+V RIWK+CES P+ D +AAI A+GKLNKV+EAEA+F+++ ++ S+
Sbjct: 378 IYASLGREDEVTRIWKICESKPYFDESLAAIHAFGKLNKVQEAEAIFEKIVTMGRRASSN 437
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y+ LL+VY DHKMLSKGKDLVK+MAESGC I WDAL+KL+VE GEVEKADS+L KA
Sbjct: 438 TYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSMLDKA 497
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
+Q+ K M +S+M IMD+Y+KRGD+H+TEKIF +MR+VGY +R +QFQ L+QAYINAK
Sbjct: 498 SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREVGYTSRLRQFQALLQAYINAKA 557
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
PAYG+RDRM+ADN+FPNK++AAQ+AQ D F+KTA+S++LD
Sbjct: 558 PAYGMRDRMKADNIFPNKSMAAQLAQGDPFKKTAISDILD 597
>gi|15220095|ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis thaliana]
gi|20259918|gb|AAM13306.1| unknown protein [Arabidopsis thaliana]
gi|332198258|gb|AEE36379.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198259|gb|AEE36380.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 283/460 (61%), Positives = 379/460 (82%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ AP +SI S L K+ EEGN+++R EIA AM LR RRMYG+ALQ+SEWLE NKK++ E
Sbjct: 137 VSAPGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTE 196
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS LDL K+RGL+K E+ +QKIP+SF+GEV+YRTLLANCVA NVKK+E VFN+MK
Sbjct: 197 RDYASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVAAGNVKKSELVFNKMK 256
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFP++ F C+Q+L+L+KR+D+KK+ADVLLLMEKEN+K + +YKILID+KG +ND++G
Sbjct: 257 DLGFPLSGFTCDQMLLLHKRIDRKKIADVLLLMEKENIKPSLLTYKILIDVKGATNDISG 316
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M+Q++E MK EG+E D TQA+ A+HY G K+KAE +LKEMEG++L+ +R + LL
Sbjct: 317 MEQILETMKDEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGESLEANRRAFKDLLS 376
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
+YA LG+ D+V RIWK+CES P+ + +AAI+A+GKLNKV+EAEA+F+++ K ++ S+
Sbjct: 377 IYASLGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSS 436
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y+ LL+VY DHKMLSKGKDLVK+MAESGC I WDAL+KL+VE GEVEKADS+L KA
Sbjct: 437 TYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKA 496
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
+Q+ K M +S+M IMD+Y+KRGD+H+TEKIF +MR+ GY +R +QFQ L+QAYINAK+
Sbjct: 497 SKQSHTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINAKS 556
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
PAYG+RDR++ADN+FPNK++AAQ+AQ D F+KTA+S++LD
Sbjct: 557 PAYGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596
>gi|449506011|ref|XP_004162628.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 613
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 294/459 (64%), Positives = 371/459 (80%), Gaps = 1/459 (0%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
AP +++ S L K+ EG +LSR +I+ AM NLR RMYGKALQ SEWLE N KLDF+E+D
Sbjct: 155 APGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKD 214
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
YAS LDLI KLRGL+ AE+YI KIP+SF+GEVVYRTLLANCV NV+KAEEVFN+MKD
Sbjct: 215 YASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYRTLLANCVIACNVQKAEEVFNKMKDL 274
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
FP+T+FACNQLL+LYKR DK+KVAD+LLLMEKENVK ++F+Y+ILID KG SND+TGM+
Sbjct: 275 EFPITAFACNQLLLLYKRTDKRKVADILLLMEKENVKPSRFTYRILIDTKGLSNDITGME 334
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
QVV+ MK+EGIE D ST ++LAKHY+SGG K+KA+A+LKEME N + RW CR+LLPLY
Sbjct: 335 QVVDTMKAEGIELDVSTLSVLAKHYISGGLKDKAKAILKEMEEINSEGSRWPCRILLPLY 394
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
EL D+V R+W++C SNP ++ CMAAI AWGKL ++EAE +F R+ KT +KLS +HY
Sbjct: 395 GELQMEDEVRRLWEICGSNPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKLSARHY 454
Query: 303 TALLKVY-ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+ +L VY D KML+KGK++VKQMAESG + P+ DA+VKL+VE GEVEKADS L+K
Sbjct: 455 STMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKLYVEAGEVEKADSFLVKTV 514
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
Q K KPMF++Y+ +MD+YA RGD+ + EKIF MR+ GYV R QFQTL+QAY+NAK P
Sbjct: 515 LQYKKKPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQFQTLIQAYVNAKAP 574
Query: 422 AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
AYG+R+RM+AD+VFPNKALA ++AQVD+ + VS+LLD
Sbjct: 575 AYGMRERMKADSVFPNKALAGKLAQVDSLKMREVSDLLD 613
>gi|356534606|ref|XP_003535844.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Glycine max]
Length = 600
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 297/460 (64%), Positives = 383/460 (83%), Gaps = 1/460 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
++AP +S+ S L+K+A +G +LSR EI LA+ LR R+MYG+A QL +WLE+NKKL+F+E
Sbjct: 142 LNAPGLSVDSALSKWAGQGKELSRKEIFLAVRELRRRKMYGRAFQLFQWLESNKKLEFME 201
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
DYAS LDLIAKLRGL +AE YI+ +PESFRGE++YRTLLANC + NN+ +E++FN+MK
Sbjct: 202 SDYASQLDLIAKLRGLPQAEKYIESVPESFRGELLYRTLLANCASQNNLIASEKIFNKMK 261
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D P+T FACNQLL+LYK+LDKKK+ADVLLLMEKENVK + F+Y+ILID KG SND+ G
Sbjct: 262 DLDLPLTVFACNQLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRILIDSKGHSNDIAG 321
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M+QV E MK EG EPD QA+LA+HY S G KEKAEA+LKE+EG+NL+E +W C LL
Sbjct: 322 MEQVFETMKEEGFEPDIQLQALLARHYTSAGLKEKAEAILKEIEGENLEEKQWVCATLLR 381
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA LGKAD+V RIWK+CES P +D C+AA+EAWGKL K+EEAEAVF+ SK W KL++K
Sbjct: 382 LYANLGKADEVERIWKVCESKPRVDDCLAAVEAWGKLEKIEEAEAVFEMASKKW-KLNSK 440
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+Y+ LLK+YA++KML+KGKDL+K+MA+SG IGPL W+ALVKL+++ GEVEKADS+L KA
Sbjct: 441 NYSILLKIYANNKMLAKGKDLIKRMADSGLRIGPLTWNALVKLYIQAGEVEKADSVLQKA 500
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
QQ++ +PMF++Y+ I++QYAKRGD+H++EKIF +MRQ GY +R QF+ L+QAY+NAK
Sbjct: 501 IQQSQLQPMFTTYLDILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQFKVLMQAYVNAKV 560
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
PAYGIR+RM+ADN+FPNK LA Q+ VDAFRK VS+LLD
Sbjct: 561 PAYGIRERMKADNLFPNKTLANQLFLVDAFRKNPVSDLLD 600
>gi|449506017|ref|XP_004162629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 608
Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust.
Identities = 293/455 (64%), Positives = 369/455 (81%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+S+ S L K+ EG DLSRAEI+LAM +LR RRM+GKALQ SEWLE N +L+F +RDYAS
Sbjct: 154 LSVPSALDKWVSEGKDLSRAEISLAMLHLRKRRMFGKALQFSEWLEANGQLEFNQRDYAS 213
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
LDLIAK++GL KAESYI KIP+SF+GEV++RTLLAN VA NNVKKAEEVFN+MKD FP
Sbjct: 214 RLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFP 273
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+T FA +Q+LILYKR+DK+K+AD+L LMEKENVK + F+YKILID KG ND++GM+QVV
Sbjct: 274 MTPFAHDQMLILYKRIDKRKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQVV 333
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
++MK+EGI+PD ST ++LAKHYVS G K+KA+ +LK+ME +N K R CR+LLPLY L
Sbjct: 334 DSMKAEGIKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLYGAL 393
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
D+V R+WK+CE+NP ++ MAAI AWGKL V+EAE +F R KTWKK ST+HY +
Sbjct: 394 QMEDEVRRLWKICEANPHMEESMAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTRHYNTM 453
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ VY KML+KGK+LV QMAESGC + L WDA+VKL+VE GEVEKADS L+KA Q+
Sbjct: 454 MNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVEKADSFLVKAVQKYG 513
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
KP+F+SY +MD YA+RGD+H+ EKIF +M Q G+V R QF TL+QAY+N+KTPAYG+
Sbjct: 514 MKPLFTSYKTLMDHYARRGDVHNAEKIFDKMIQSGFVPRLGQFGTLLQAYVNSKTPAYGM 573
Query: 426 RDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
+DRM A N++PNKALA Q+AQV+AFRKTAVS+LLD
Sbjct: 574 KDRMMAYNIYPNKALAGQLAQVNAFRKTAVSDLLD 608
>gi|307136025|gb|ADN33879.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 608
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/459 (62%), Positives = 364/459 (79%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+AP +S+ S L K+ EG++LSR +I+ M LR RRM+GKALQ SEWLE + +L+F E
Sbjct: 150 NAPALSVTSALDKWVSEGHELSRDDISSTMFGLRKRRMFGKALQFSEWLEASGQLEFNEA 209
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
DYAS LDLIAK++GL KAE+YI KIP SFRGE VYRTLLAN V N+VKKAEEVFNRMKD
Sbjct: 210 DYASHLDLIAKVQGLHKAETYIAKIPNSFRGEAVYRTLLANYVLANDVKKAEEVFNRMKD 269
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
FP+T+FA +Q+LILYKR+D++++AD+L LMEKENVK F+YKILID KG SND++GM
Sbjct: 270 LEFPMTTFAYDQMLILYKRIDRRRIADILSLMEKENVKPRPFTYKILIDAKGLSNDISGM 329
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+QVV+ MK+EGI+ D T +LAKHYV GG K+KA +LK E N K RW CR LLPL
Sbjct: 330 EQVVDTMKAEGIKLDVDTLLLLAKHYVLGGLKDKAMPILKATEEVNSKGSRWPCRYLLPL 389
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
Y EL D+V R+W++CE NP ++ CMAAI AWGKL ++EAE +F R+ KTWK+LSTKH
Sbjct: 390 YGELQMEDEVRRLWEICEPNPNVEECMAAIVAWGKLKNIQEAEKIFDRVVKTWKRLSTKH 449
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y+ ++KVY D KML+KGK+LV QMA+SGC I P+ WDA+VKL+VE GEVEKADS L KA
Sbjct: 450 YSTMIKVYGDSKMLTKGKELVNQMAKSGCRIDPMIWDAVVKLYVEAGEVEKADSFLFKAV 509
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+Q KP+F SY +M YA++GD+H++EKIFH++RQ GY F QF TLVQAY+NAKTP
Sbjct: 510 KQYGMKPLFDSYRTLMVHYARKGDVHNSEKIFHKIRQSGYPTHFGQFVTLVQAYLNAKTP 569
Query: 422 AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
AYG+R+RM ADNVFPNKALA ++AQ+D+FR+T VS+LLD
Sbjct: 570 AYGMRERMMADNVFPNKALAGKLAQLDSFRQTTVSDLLD 608
>gi|357439973|ref|XP_003590264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479312|gb|AES60515.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 557
Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/455 (63%), Positives = 371/455 (81%), Gaps = 1/455 (0%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+S+ S L K+ E+G +LSR EI LA+ +LR R+MYG+ALQ +WLE+NKKL+F E++YAS
Sbjct: 104 LSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTEKEYAS 163
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
LDLIAKLRGL KAE Y++ +P SFRGE++YRTLLANC + N++K EE FN+M++ GFP
Sbjct: 164 KLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFP 223
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
VT+FACNQLL++YK++DKKK+ADVLL+MEKENVK + ++YKILID+KG SND+ GM Q+V
Sbjct: 224 VTAFACNQLLLIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDGMSQIV 283
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E MK+EG E D T+A LA+HY + G EK EA+LKE+EG+NLKE+ W C LL LYA L
Sbjct: 284 ETMKAEGCELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLLRLYAIL 343
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
G+AD+V RIWK+CES P ++ C+AAIEAWG+L K+EEAEAVF+ MS W KL+ ++Y +L
Sbjct: 344 GRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKW-KLTARNYESL 402
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
LK+Y HKML+KGKDL+K M +SGC IGP WDALV L+V+ GEVEKAD++L KA QQNK
Sbjct: 403 LKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKALQQNK 462
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
KPMF+++M IM+QYAKRGD+H+ EKIF+R+RQ Y++R F L QAY NAK PAYGI
Sbjct: 463 MKPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPFHALAQAYKNAKLPAYGI 522
Query: 426 RDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
R+RM+ADN+FPNKALA Q+ QVD FRKT VS+LLD
Sbjct: 523 RERMKADNLFPNKALADQLVQVDPFRKTPVSDLLD 557
>gi|356503391|ref|XP_003520493.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80270, mitochondrial-like [Glycine max]
Length = 580
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 283/460 (61%), Positives = 366/460 (79%), Gaps = 10/460 (2%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
M+A S+H L K+ EEGN+L+R R R+++G+AL LSEWLE+ K+ +FIE
Sbjct: 131 MNAQCTSLHLVLEKWLEEGNELTRX---------RKRKLFGRALLLSEWLESKKEFEFIE 181
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS LDLIAKLRGL KAE YI+ IPES E++YRTLLANCV+ NNVKKAEEVF++MK
Sbjct: 182 RDYASRLDLIAKLRGLHKAEVYIETIPESCSREIMYRTLLANCVSQNNVKKAEEVFSKMK 241
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D P+T F CN+LL LYKR DKKK+AD+LLLME E +K ++ SY ILID KGQS D+ G
Sbjct: 242 DLDLPITVFTCNELLFLYKRNDKKKIADLLLLMENEKIKPSRHSYSILIDTKGQSKDIGG 301
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
MDQ+V+ MK++GIEPD +TQA+LA+HY+S G ++K E +LK+MEG+NLK++RW CR+LLP
Sbjct: 302 MDQIVDRMKAQGIEPDINTQAVLARHYISAGLQDKVETLLKQMEGENLKQNRWLCRILLP 361
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA LGK D+V RIWK+CE+NP D C+ AIEAWGKLNK++EAE VF+ M K W KLS+K
Sbjct: 362 LYANLGKVDEVGRIWKVCETNPRYDECLGAIEAWGKLNKIDEAEKVFEMMVKKW-KLSSK 420
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+ LLKVYA+++ML KGKDL+K++ + GC IGPL WD +VKL+V+ GEVEKADS+L KA
Sbjct: 421 TCSILLKVYANNEMLMKGKDLMKRIGDGGCRIGPLTWDTIVKLYVQTGEVEKADSVLQKA 480
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
QQ++ KPMFS+Y+ I++QYAKRGDIH++EKIF RM+Q Y ++ K +Q L+ AYINAK
Sbjct: 481 AQQSQMKPMFSTYLTILEQYAKRGDIHNSEKIFLRMKQADYTSKAKMYQVLMNAYINAKV 540
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
PAYGIRDR++AD+++PN+ L Q+ QVD FRK V +LLD
Sbjct: 541 PAYGIRDRLKADSIYPNRNLVNQLVQVDGFRKNPVCDLLD 580
>gi|449437710|ref|XP_004136634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
gi|449506005|ref|XP_004162626.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 606
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/461 (62%), Positives = 369/461 (80%), Gaps = 2/461 (0%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+A +S+ S L K+ EGN+LS +I+ M +LR RRM+GKALQ SEWLE + +L+F E
Sbjct: 146 NASGLSVSSALDKWVSEGNELSWDDISSTMMSLRRRRMFGKALQFSEWLEASGQLEFNEN 205
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
DYAS LDLIAK++GL KAESYI KIP+SF+GEV+YRTLLAN VA NNV KAEEVFN+MKD
Sbjct: 206 DYASRLDLIAKVQGLHKAESYIAKIPKSFQGEVMYRTLLANYVAANNVNKAEEVFNKMKD 265
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
FP+T+FA NQ+L+LYKR D++K+ADVLLLMEKENVK + F+YKILID KG S D++GM
Sbjct: 266 LEFPMTTFAYNQVLVLYKRNDRRKIADVLLLMEKENVKPSPFTYKILIDAKGLSKDISGM 325
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+QVV+ MK+EGIE D +LAKHYVS G K+KA+A LKEME N K RW CRLLLPL
Sbjct: 326 EQVVDTMKAEGIELDVFALCLLAKHYVSCGLKDKAKATLKEMEEINSKGSRWPCRLLLPL 385
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW--KKLST 299
Y EL D+V R+W++CE+NP ++ CMAAI AWGKL + EAE +F ++ KTW KK+ST
Sbjct: 386 YGELEMEDEVRRLWEICEANPHIEECMAAIVAWGKLKNIHEAEKIFDKVVKTWPKKKIST 445
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
KHY ++KVY D KML+KGK+LV QMAESG I PLAWDA+VKL+VE GEVEKAD+ L+K
Sbjct: 446 KHYCTMIKVYGDCKMLTKGKELVNQMAESGYSIDPLAWDAVVKLYVEAGEVEKADTFLVK 505
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
A ++ + +P++ SY +M+ YA+RGD+H+ EKIF++MRQ GY F QF+TL+QAY+N+K
Sbjct: 506 AVKKYEMRPLYCSYRTLMNHYARRGDVHNAEKIFYKMRQSGYGPWFNQFETLIQAYVNSK 565
Query: 420 TPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
TPAYG+R+RM AD +FPNKALA ++AQVD+FRKTA+ +LLD
Sbjct: 566 TPAYGMRERMMADKLFPNKALAGKLAQVDSFRKTALPDLLD 606
>gi|449506007|ref|XP_004162627.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/459 (61%), Positives = 367/459 (79%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+APD S+ S L K+ +GN LSR +I+ M +LR R+M+ KALQ SEWLE N +L+F ER
Sbjct: 152 NAPDFSVASALVKWVSQGNKLSRDDISSTMISLRRRQMFRKALQFSEWLEANGQLEFNER 211
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
DYAS + LIAK++GL KAESYI KIP+SF+GEVV+R LLAN V NNV+KAEEVFN++KD
Sbjct: 212 DYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVVANNVEKAEEVFNKIKD 271
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
FP++ FA NQ+L+LYK++D++K+ADVLLLMEKEN+K F+YKILID KG SND++GM
Sbjct: 272 LEFPMSIFAYNQMLVLYKKIDRRKIADVLLLMEKENIKPCPFTYKILIDGKGLSNDISGM 331
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+QVV++MK+EGIE D ST ++LAKHYVS G K KA+A+LKE+E N +W CR+LLP
Sbjct: 332 EQVVDSMKAEGIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEETNSNGPQWLCRILLPF 391
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
Y +L D+V R+W++CE+NP ++ CMAAI AWG+L V+EAE +F R+ KTWKKLS +H
Sbjct: 392 YGKLQMEDEVRRLWEICEANPHIEECMAAIVAWGQLKNVQEAEKIFDRVVKTWKKLSARH 451
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y+ ++ VY D KML+KGK++V QMAESGCHI L +A+VKL+VE GEVEKADS L+KA
Sbjct: 452 YSIMMNVYRDSKMLTKGKEVVNQMAESGCHIDLLTCNAIVKLYVEAGEVEKADSFLVKAV 511
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
++ KP+F+SY +MD YA+RGD+H+ EKIF +MRQ Y+ R QF TL+QAY+NAKTP
Sbjct: 512 KKYGMKPLFTSYKTLMDHYARRGDVHNAEKIFDKMRQSSYIPRLGQFGTLIQAYVNAKTP 571
Query: 422 AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
AYG+R+RM AD VFPNK LA Q+AQVD+FRKTAVS+LLD
Sbjct: 572 AYGMRERMMADKVFPNKTLAGQLAQVDSFRKTAVSDLLD 610
>gi|449437712|ref|XP_004136635.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 284/459 (61%), Positives = 366/459 (79%), Gaps = 1/459 (0%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
AP +++ S L K+ EG +LSR +I+ AM NLR RMYGKALQ SEWLE N KLDF+E+D
Sbjct: 147 APGLTVSSALDKWVSEGKELSRDDISSAMLNLRKCRMYGKALQFSEWLEANGKLDFVEKD 206
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
YAS LDLI KLRGL+ AE+YI KIP+SF+GEVVY+TLL NCV +NV KAE+VFN+MK+
Sbjct: 207 YASRLDLIGKLRGLRMAENYIAKIPKSFQGEVVYQTLLVNCVIASNVHKAEKVFNKMKNL 266
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
FP+T+FACNQLL+LYKR DK+K+ADVLLLM+KENVK + +Y+ILID+ G SND+TGM+
Sbjct: 267 EFPITAFACNQLLLLYKRTDKRKIADVLLLMKKENVKYSTSTYRILIDVNGLSNDITGME 326
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+VV++MK+EGI+ D T + L KHYVSGG K+KA+A+LKEME N + RW CR+LLPLY
Sbjct: 327 EVVDSMKAEGIKLDVETLSRLVKHYVSGGLKDKAKAILKEMEEINSEGSRWPCRILLPLY 386
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
EL D+V R+W++C SNP ++ CMAAI AWGKL ++EAE +F R+ KT +KLS +HY
Sbjct: 387 GELQMEDEVRRLWEICGSNPHIEECMAAIVAWGKLKNIQEAEKIFDRVVKTGEKLSARHY 446
Query: 303 TALLKVY-ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+ +L VY D KML+KGK++VKQMAESG + P+ DA+VKL+VE GEVEKADS L+K
Sbjct: 447 STMLNVYREDSKMLTKGKEVVKQMAESGSRMDPVTLDAVVKLYVEAGEVEKADSFLVKTV 506
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
Q K KPMF++Y+ +MD+YA RGD+ + EKIF MR+ GYV R QFQTL+QAY+NAK P
Sbjct: 507 LQYKKKPMFTTYITLMDRYASRGDVPNAEKIFGMMRKYGYVGRLSQFQTLIQAYVNAKAP 566
Query: 422 AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
AYG+R+RM+AD+VFPNKALA ++AQVD+ + VS+LLD
Sbjct: 567 AYGMRERMKADSVFPNKALAGKLAQVDSLKMREVSDLLD 605
>gi|297844450|ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 273/455 (60%), Positives = 364/455 (80%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+S+ S L K+ E+G D SR E A AM LR RRMYG+ALQ++EWL+ NK+ + ERDYAS
Sbjct: 140 LSVGSALDKWVEQGKDTSRTEFASAMLQLRKRRMYGRALQMTEWLDDNKQFEMKERDYAS 199
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
LDLI+K+RGL K E+YI+ IPESFRGE+VYRTLL+N VA +NV+ AE VFN+MKD GFP
Sbjct: 200 RLDLISKVRGLYKGEAYIETIPESFRGELVYRTLLSNYVATSNVRTAEAVFNKMKDLGFP 259
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+++F CNQ+LILYKR+DKKK+ADVLLLMEKEN+K +YKILID KG SND+TGM+Q+V
Sbjct: 260 LSTFTCNQMLILYKRVDKKKIADVLLLMEKENLKPNLNTYKILIDTKGLSNDITGMEQIV 319
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E MKSEG+EPD +A++A++Y S G KEKAE +LKEMEG++L+E+R + LL +Y L
Sbjct: 320 ETMKSEGVEPDLRARALIARNYASAGLKEKAEKVLKEMEGESLEENRHVYKDLLSVYGFL 379
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
+AD+V RIWK+CE P + +AAI A+GK++KV+EAEAVF++M K ++S+ Y+ L
Sbjct: 380 QRADEVTRIWKICEEKPRYNESLAAILAFGKIDKVKEAEAVFEKMLKMSHRVSSNVYSVL 439
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
L+VY DHKM+S+GKDLVKQM +SGC+IG L DA++KL++E GEVEKA+S L KA Q +
Sbjct: 440 LRVYVDHKMVSEGKDLVKQMLDSGCNIGALTLDAVIKLYLEAGEVEKAESSLSKAIQSKQ 499
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
KP+ SS+M +M +Y +RGD+H+TEKIF RM+Q GY +RF+ +Q L+QAY+NAK PAYG+
Sbjct: 500 IKPLMSSFMYVMGEYVRRGDVHNTEKIFQRMKQFGYQSRFRTYQALIQAYVNAKAPAYGM 559
Query: 426 RDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
+DRM+ADN+FPNK LAAQ+ + D F+K +S+LLD
Sbjct: 560 KDRMKADNIFPNKGLAAQLTKTDPFKKAPLSDLLD 594
>gi|357439923|ref|XP_003590239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479287|gb|AES60490.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 272/432 (62%), Positives = 352/432 (81%), Gaps = 1/432 (0%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+S+ S L K+ E+G +LSR EI LA+ +LR R+MYG+ALQ +WLE+NKKL+F E++YAS
Sbjct: 153 LSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDWLESNKKLEFTEKEYAS 212
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
LDLIAKLRGL KAE Y++ +P SFRGE++YRTLLANC + N++K EE FN+M++ GFP
Sbjct: 213 KLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENLRKTEETFNKMRELGFP 272
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
VT+FACNQLL++YK++DKKK+ADVLL+MEKENVK + ++YKILID+KG SND+ GM Q+V
Sbjct: 273 VTAFACNQLLLIYKKIDKKKIADVLLMMEKENVKPSSYTYKILIDVKGLSNDIDGMSQIV 332
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E MK+EG E D T+A LA+HY + G EK EA+LKE+EG+NLKE+ W C LL LYA L
Sbjct: 333 ETMKAEGCELDHLTRASLARHYAAAGLTEKTEAILKEIEGENLKENMWVCPTLLRLYAIL 392
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
G+AD+V RIWK+CES P ++ C+AAIEAWG+L K+EEAEAVF+ MS W KL+ ++Y +L
Sbjct: 393 GRADEVERIWKVCESKPRVEDCLAAIEAWGRLKKIEEAEAVFEMMSNKW-KLTARNYESL 451
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
LK+Y HKML+KGKDL+K M +SGC IGP WDALV L+V+ GEVEKAD++L KA QQNK
Sbjct: 452 LKIYIRHKMLNKGKDLIKTMGDSGCTIGPTTWDALVSLYVQAGEVEKADTVLQKALQQNK 511
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
KPMF+++M IM+QYAKRGD+H+ EKIF+R+RQ Y++R F L QAY NAK PAYGI
Sbjct: 512 MKPMFTTFMTIMEQYAKRGDVHNAEKIFYRLRQANYISRISPFHALAQAYKNAKLPAYGI 571
Query: 426 RDRMRADNVFPN 437
R+RM+ADN+FPN
Sbjct: 572 RERMKADNLFPN 583
>gi|449437992|ref|XP_004136774.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Cucumis sativus]
Length = 604
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 276/455 (60%), Positives = 351/455 (77%), Gaps = 4/455 (0%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+S+ S L K+ EG DL+ I +L + Q SEWLE N +L+F +RDYAS
Sbjct: 154 LSVPSALDKWVSEGKDLN---ICFLFYHL-IACISVWVSQFSEWLEANGQLEFNQRDYAS 209
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
LDLIAK++GL KAESYI KIP+SF+GEV++RTLLAN VA NNVKKAEEVFN+MKD FP
Sbjct: 210 RLDLIAKVQGLPKAESYIAKIPQSFQGEVIHRTLLANYVAANNVKKAEEVFNKMKDLEFP 269
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+T FA +Q+LILYKR+DK+K+AD+L LMEKENVK + F+YKILID KG ND++GM+QVV
Sbjct: 270 MTPFAHDQMLILYKRIDKRKLADILSLMEKENVKPSPFTYKILIDAKGLCNDISGMEQVV 329
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
++MK+EGI+PD ST ++LAKHYVS G K+KA+ +LK+ME +N K R CR+LLPLY L
Sbjct: 330 DSMKAEGIKPDVSTLSLLAKHYVSNGLKDKAKVILKDMEENNSKGSRLPCRILLPLYGAL 389
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
D+V R+WK+CE+NP ++ MAAI AWGKL V+EAE +F R KTWKK ST+HY +
Sbjct: 390 QMEDEVRRLWKICEANPHMEESMAAIVAWGKLKNVQEAEKIFDRFVKTWKKPSTRHYNTM 449
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ VY KML+KGK+LV QMAESGC + L WDA+VKL+VE GEVEKADS L+KA QNK
Sbjct: 450 MNVYGGSKMLTKGKELVNQMAESGCRMDELTWDAVVKLYVEAGEVEKADSFLVKAVLQNK 509
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
KPMF++Y+ +MD+YA RGD+ + EK F MR++GYV R QFQTL+QAY+NAK PAYG+
Sbjct: 510 KKPMFTTYITLMDRYASRGDVPNVEKNFAMMRRLGYVGRLSQFQTLIQAYVNAKAPAYGM 569
Query: 426 RDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
R+RM+ADNVFPNK LA ++AQVD + VS+LLD
Sbjct: 570 RERMKADNVFPNKDLAGKLAQVDCLKMRKVSDLLD 604
>gi|255562320|ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538605|gb|EEF40208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 342
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 259/342 (75%), Positives = 304/342 (88%)
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
MKD FPVT+FACNQLL+LYKRLDKKK+ADVLLLMEKEN+K + F+YK+LID KGQSNDL
Sbjct: 1 MKDLEFPVTTFACNQLLLLYKRLDKKKIADVLLLMEKENIKPSLFTYKLLIDTKGQSNDL 60
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
TGMDQ+VE MK++GIEPD + +AILAKHY SGG KEKAEA+LKEMEG NL+EHRW CRLL
Sbjct: 61 TGMDQIVETMKADGIEPDINIRAILAKHYASGGLKEKAEAILKEMEGGNLEEHRWACRLL 120
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LPLYA LGKAD+V R+WK+CES+P L+ C+A IEAWGKL K+++AE VF RM TWKKLS
Sbjct: 121 LPLYAALGKADEVERVWKVCESSPQLEECVAVIEAWGKLKKIDKAEEVFNRMLTTWKKLS 180
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
++HY+ALLKVYA HKML+ GKDL+K+MA+SGC IGPL WD+LVKL+VE GEVEKADS+L
Sbjct: 181 SRHYSALLKVYASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAGEVEKADSVLH 240
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
KA QQN KPMFSSY++IMDQYAKRGD+H+ EK+FHRMRQ GYVAR +QFQ LVQ YINA
Sbjct: 241 KAAQQNHMKPMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGYVARLRQFQALVQTYINA 300
Query: 419 KTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
K PAYGIR+RM+ADN+FPNKALAAQ+A VDAFRKTAV++LLD
Sbjct: 301 KAPAYGIRERMKADNIFPNKALAAQLALVDAFRKTAVTDLLD 342
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 11/238 (4%)
Query: 88 ESFRGEVVYRTLLANCVAGNNVK-KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
+ ++ R +LA A +K KAE + M+ +AC LL LY L K
Sbjct: 73 DGIEPDINIRAILAKHYASGGLKEKAEAILKEMEGGNLEEHRWACRLLLPLYAALGKADE 132
Query: 147 ADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
+ + + + + +L + +I+ G+ + ++V M + + S + L K
Sbjct: 133 VERVWKVCESSPQLEECV--AVIEAWGKLKKIDKAEEVFNRMLTTWKKLSSRHYSALLKV 190
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESN-- 261
Y S + ++K+M + T L+ LY E G KAD V + K + N
Sbjct: 191 YASHKMLANGKDLIKKMADSGCRIGPLTWDSLVKLYVEAGEVEKADSV--LHKAAQQNHM 248
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P + ++ + K V AE +F RM + + + AL++ Y + K + G
Sbjct: 249 KPMFSSYIVIMDQYAKRGDVHNAEKMFHRMRQAGYVARLRQFQALVQTYINAKAPAYG 306
>gi|145335742|ref|NP_173001.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806396|sp|Q9XI21.2|PPR44_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15480, mitochondrial; Flags: Precursor
gi|332191207|gb|AEE29328.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 594
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 270/455 (59%), Positives = 365/455 (80%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+S+ S L K+ E+G D +R E AM LR RRM+G+ALQ++EWL+ NK+ + ERDYA
Sbjct: 140 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYAC 199
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
LDLI+K+RG K E+YI+ IPESFRGE+VYRTLLAN VA +NV+ AE VFN+MKD GFP
Sbjct: 200 RLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFP 259
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+++F CNQ+LILYKR+DKKK+ADVLLL+EKEN+K +YKILID KG SND+TGM+Q+V
Sbjct: 260 LSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIV 319
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E MKSEG+E D +A++A+HY S G KEKAE +LKEMEG++L+E+R C+ LL +Y L
Sbjct: 320 ETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYL 379
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
+ D+V R+WK+CE NP + +AAI A+GK++KV++AEAVF+++ K ++S+ Y+ L
Sbjct: 380 QREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVL 439
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
L+VY DHKM+S+GKDLVKQM++SGC+IG L WDA++KL+VE GEVEKA+S L KA Q +
Sbjct: 440 LRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQSKQ 499
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
KP+ SS+M +M +Y +RGD+H+TEKIF RM+Q GY +RF +QTL+QAY+NAK PAYG+
Sbjct: 500 IKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGM 559
Query: 426 RDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
++RM+ADN+FPNK LAAQ+A+ D F+KT +S+LLD
Sbjct: 560 KERMKADNIFPNKRLAAQLAKADPFKKTPLSDLLD 594
>gi|5103846|gb|AAD39676.1|AC007591_41 F9L1.43 [Arabidopsis thaliana]
Length = 623
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/455 (59%), Positives = 365/455 (80%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+S+ S L K+ E+G D +R E AM LR RRM+G+ALQ++EWL+ NK+ + ERDYA
Sbjct: 169 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYAC 228
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
LDLI+K+RG K E+YI+ IPESFRGE+VYRTLLAN VA +NV+ AE VFN+MKD GFP
Sbjct: 229 RLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGFP 288
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+++F CNQ+LILYKR+DKKK+ADVLLL+EKEN+K +YKILID KG SND+TGM+Q+V
Sbjct: 289 LSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQIV 348
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E MKSEG+E D +A++A+HY S G KEKAE +LKEMEG++L+E+R C+ LL +Y L
Sbjct: 349 ETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVYGYL 408
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
+ D+V R+WK+CE NP + +AAI A+GK++KV++AEAVF+++ K ++S+ Y+ L
Sbjct: 409 QREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHRVSSNVYSVL 468
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
L+VY DHKM+S+GKDLVKQM++SGC+IG L WDA++KL+VE GEVEKA+S L KA Q +
Sbjct: 469 LRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESSLSKAIQSKQ 528
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
KP+ SS+M +M +Y +RGD+H+TEKIF RM+Q GY +RF +QTL+QAY+NAK PAYG+
Sbjct: 529 IKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFWAYQTLIQAYVNAKAPAYGM 588
Query: 426 RDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
++RM+ADN+FPNK LAAQ+A+ D F+KT +S+LLD
Sbjct: 589 KERMKADNIFPNKRLAAQLAKADPFKKTPLSDLLD 623
>gi|125535921|gb|EAY82409.1| hypothetical protein OsI_37623 [Oryza sativa Indica Group]
Length = 611
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 254/461 (55%), Positives = 360/461 (78%), Gaps = 1/461 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+++P + + L K+ +GN L R+E+ + +LR R++Y KALQL E++E +K +D E
Sbjct: 151 LESPRVDVAGALKKWLNDGNTLDRSELFYVLLSLRRRKLYIKALQLLEYVEESKLIDLGE 210
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS +DL+AK + KAE YI+ +P S RGE+VYRTLLANCVA NVKKAE+VFN+MK
Sbjct: 211 RDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMK 270
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFPV+ F+CNQLL+LYKR+DKKK+ DVL +MEKENVK + F+YK+L+D KG + D+
Sbjct: 271 DLGFPVSVFSCNQLLLLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIED 330
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M++V++AM+++GIEPD QA +A+HY+ GG +EKAEA+L++M GD++ E+R C+ +LP
Sbjct: 331 MEKVIQAMQADGIEPDLLFQATIARHYIFGGYREKAEAILEQMVGDDINENRSACKFVLP 390
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA LGK D V RIWK+CE+N LD CM+AIEA+GKL VE+AE +F M KTWK LS+K
Sbjct: 391 LYAFLGKNDDVERIWKVCEANARLDECMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLSSK 450
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+Y A+LKVYA+ K+ KGK+L K+M + GC +GP D+LVKL+ + GEVEKADSIL K
Sbjct: 451 YYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVKLYSDAGEVEKADSILHKL 510
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
+NK KPM+++Y++++D Y+K+GD+H+ EK+F ++RQ+GY R +Q+Q L++AY+NAKT
Sbjct: 511 SYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKT 570
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
P YG ++RM+AD++FPN+A+A+ +A D F RK A+S+LLD
Sbjct: 571 PPYGFKERMKADDIFPNRAVASLLAATDPFNRKNAMSKLLD 611
>gi|115487560|ref|NP_001066267.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|77553759|gb|ABA96555.1| DNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113648774|dbj|BAF29286.1| Os12g0170100 [Oryza sativa Japonica Group]
gi|125578643|gb|EAZ19789.1| hypothetical protein OsJ_35368 [Oryza sativa Japonica Group]
gi|215767656|dbj|BAG99884.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 611
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 254/461 (55%), Positives = 359/461 (77%), Gaps = 1/461 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+++P + + L K+ +GN L R+E+ + LR R++Y KALQL E++E +K +D E
Sbjct: 151 LESPRVDVAGALKKWLNDGNTLDRSELFYVLLILRRRKLYIKALQLLEYVEESKLIDLGE 210
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS +DL+AK + KAE YI+ +P S RGE+VYRTLLANCVA NVKKAE+VFN+MK
Sbjct: 211 RDYASRVDLVAKTHSIYKAEKYIENVPASHRGEIVYRTLLANCVAIANVKKAEQVFNKMK 270
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFPV+ F+CNQLL+LYKR+DKKK+ DVL +MEKENVK + F+YK+L+D KG + D+
Sbjct: 271 DLGFPVSVFSCNQLLLLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIED 330
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M++V++AM+++GIEPD QA +A+HY+ GG +EK+EA+L++M GD++ E+R C+ +LP
Sbjct: 331 MEKVIQAMQADGIEPDLLFQATIARHYIFGGYREKSEAILEQMVGDDINENRSACKFVLP 390
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA LGK D V RIWK+CE+N LD CM+AIEA+GKL VE+AE +F M KTWK LS+K
Sbjct: 391 LYAFLGKNDDVERIWKVCEANARLDECMSAIEAFGKLGDVEKAEEIFDNMFKTWKTLSSK 450
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+Y A+LKVYA+ K+ KGK+L K+M + GC +GP D+LVKL+ + GEVEKADSIL K
Sbjct: 451 YYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPYTLDSLVKLYSDAGEVEKADSILHKL 510
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
+NK KPM+++Y++++D Y+K+GD+H+ EK+F ++RQ+GY R +Q+Q L++AY+NAKT
Sbjct: 511 SYKNKIKPMYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKT 570
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
P YG ++RM+AD++FPN+A+A+ +A D F RK A+SELLD
Sbjct: 571 PPYGFKERMKADDIFPNRAVASLLAATDPFNRKNAMSELLD 611
>gi|11138066|dbj|BAB17739.1| putative DNA-binding protein [Oryza sativa Japonica Group]
Length = 591
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/459 (55%), Positives = 356/459 (77%), Gaps = 1/459 (0%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
+P + + K+ +GN L R+E+ + +LR R++Y KALQL E++E +K D ERD
Sbjct: 133 SPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERD 192
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
YAS +DL+AK+ G+ KAE YI+ +P S RGEVVYRTLLANCVA NVKK E+VFN+MKD
Sbjct: 193 YASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDL 252
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
GFPVT F+CNQLL+LYKR+DKKK+ DVL +MEKENVK + F+YK+L+D KG + D+ M+
Sbjct: 253 GFPVTVFSCNQLLLLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDME 312
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V++AM+++GIEPD QA +A+HY+ GG +EKAEA+L+++EGD++ E+R C+ +LPLY
Sbjct: 313 KVIQAMQADGIEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLY 372
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
A LGK V RIWK+CE N LD CM+AIEA+GKL VE+AE +F+ M KTWK LS ++Y
Sbjct: 373 AFLGKKADVERIWKVCEVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYY 432
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
A+LKVYA+ K+ KGK+L K+M + GC +GP D+LVKL+ + GEVEKADSIL K
Sbjct: 433 NAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHKLSY 492
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPA 422
+NK KP++++Y++++D Y+K+GD+H+ EK+F ++RQ+GY R +Q+Q L++AY+NAKTP
Sbjct: 493 KNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPP 552
Query: 423 YGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
YG ++RM+AD++FPN+A+A+ +A D F RK A+SELLD
Sbjct: 553 YGFKERMKADDIFPNRAVASLLAATDPFNRKNAMSELLD 591
>gi|56783681|dbj|BAD81093.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|56784204|dbj|BAD81589.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|125569936|gb|EAZ11451.1| hypothetical protein OsJ_01319 [Oryza sativa Japonica Group]
Length = 611
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/459 (55%), Positives = 356/459 (77%), Gaps = 1/459 (0%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
+P + + K+ +GN L R+E+ + +LR R++Y KALQL E++E +K D ERD
Sbjct: 153 SPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERD 212
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
YAS +DL+AK+ G+ KAE YI+ +P S RGEVVYRTLLANCVA NVKK E+VFN+MKD
Sbjct: 213 YASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDL 272
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
GFPVT F+CNQLL+LYKR+DKKK+ DVL +MEKENVK + F+YK+L+D KG + D+ M+
Sbjct: 273 GFPVTVFSCNQLLLLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGAARDIEDME 332
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V++AM+++GIEPD QA +A+HY+ GG +EKAEA+L+++EGD++ E+R C+ +LPLY
Sbjct: 333 KVIQAMQADGIEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLY 392
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
A LGK V RIWK+CE N LD CM+AIEA+GKL VE+AE +F+ M KTWK LS ++Y
Sbjct: 393 AFLGKKADVERIWKVCEVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYY 452
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
A+LKVYA+ K+ KGK+L K+M + GC +GP D+LVKL+ + GEVEKADSIL K
Sbjct: 453 NAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHKLSY 512
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPA 422
+NK KP++++Y++++D Y+K+GD+H+ EK+F ++RQ+GY R +Q+Q L++AY+NAKTP
Sbjct: 513 KNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPP 572
Query: 423 YGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
YG ++RM+AD++FPN+A+A+ +A D F RK A+SELLD
Sbjct: 573 YGFKERMKADDIFPNRAVASLLAATDPFNRKNAMSELLD 611
>gi|125525413|gb|EAY73527.1| hypothetical protein OsI_01409 [Oryza sativa Indica Group]
Length = 611
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 253/459 (55%), Positives = 356/459 (77%), Gaps = 1/459 (0%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
+P + + K+ +GN L R+E+ + +LR R++Y KALQL E++E +K D ERD
Sbjct: 153 SPRVDVAGATKKWLNDGNTLERSELFYVLLSLRKRKLYTKALQLLEYVEESKLFDLGERD 212
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
YAS +DL+AK+ G+ KAE YI+ +P S RGEVVYRTLLANCVA NVKK E+VFN+MKD
Sbjct: 213 YASRVDLVAKVHGIYKAEKYIENVPASHRGEVVYRTLLANCVAIANVKKTEQVFNKMKDL 272
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
GFPVT F+CNQLL+LYKR+DKKK+ DVL +MEKENVK + F+YK+L+D KG + D+ M+
Sbjct: 273 GFPVTVFSCNQLLLLYKRVDKKKLGDVLTMMEKENVKPSLFTYKLLVDTKGATRDIEDME 332
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V++AM+++GIEPD QA +A+HY+ GG +EKAEA+L+++EGD++ E+R C+ +LPLY
Sbjct: 333 KVIQAMQADGIEPDLLIQATIARHYIFGGYREKAEAILEQIEGDDINENRSACKFVLPLY 392
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
A LGK V RIWK+CE N LD CM+AIEA+GKL VE+AE +F+ M KTWK LS ++Y
Sbjct: 393 AFLGKKADVERIWKVCEVNARLDECMSAIEAFGKLGDVEKAEEIFENMFKTWKTLSFEYY 452
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
A+LKVYA+ K+ KGK+L K+M + GC +GP D+LVKL+ + GEVEKADSIL K
Sbjct: 453 NAMLKVYANKKLFDKGKELAKRMGDDGCRLGPSTLDSLVKLYSDAGEVEKADSILHKLSY 512
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPA 422
+NK KP++++Y++++D Y+K+GD+H+ EK+F ++RQ+GY R +Q+Q L++AY+NAKTP
Sbjct: 513 KNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKVRQMGYTGRIRQYQLLLEAYLNAKTPP 572
Query: 423 YGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
YG ++RM+AD++FPN+A+A+ +A D F RK A+SELLD
Sbjct: 573 YGFKERMKADDIFPNRAVASLLAATDPFNRKNAMSELLD 611
>gi|6958202|gb|AAF32491.1|AF091837_1 DNA-binding protein [Triticum aestivum]
Length = 612
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 258/460 (56%), Positives = 349/460 (75%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
++AP + TL K+ + GN R++I + NLR R+ Y KALQL EWLE +K +D E
Sbjct: 153 LEAPRNGVSGTLKKWLDGGNTFDRSDIFYVIMNLRKRKFYFKALQLLEWLEDSKVIDLGE 212
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS LDL+AK+ G+ KAE YI IP S RGE+VYRTLLANCV+ NVKK+EEVFN+MK
Sbjct: 213 RDYASRLDLVAKVHGVYKAEKYIDSIPISHRGEIVYRTLLANCVSEANVKKSEEVFNKMK 272
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFPVT FA NQLL+LYKR+DKKK+ADVL MEKENVK + F+YK+L+D KG D+ G
Sbjct: 273 DLGFPVTVFAINQLLLLYKRVDKKKIADVLAKMEKENVKPSLFTYKLLVDTKGAIRDIAG 332
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M++VVE+M++EG+EPD QA +AKHY+ G +EKAEA+L+ MEG ++K +R C++LLP
Sbjct: 333 MEKVVESMQAEGVEPDLLFQATIAKHYIFAGHREKAEAILESMEGGDIKGNRNACKILLP 392
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA LGK D V R+W++CE+NP LD C++AIE++G+L VE AE VF+ M TWK LS+K
Sbjct: 393 LYAFLGKKDDVERMWQVCEANPRLDECLSAIESFGRLGDVERAEKVFEDMFATWKTLSSK 452
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y AL+KVYAD + KGK+L K+M E GC +G D+LVKL+V GEV+KA+SIL K
Sbjct: 453 FYNALMKVYADQNLFKKGKELAKRMDEDGCRLGISTIDSLVKLYVGAGEVDKAESILHKL 512
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
+ NK KP +SSY++++D Y+K+GDIH++EK+F ++RQ+GY R +Q+Q L+ AY++AKT
Sbjct: 513 SKSNKMKPQYSSYLMLLDTYSKKGDIHNSEKVFDQLRQMGYNGRVRQYQLLLNAYVHAKT 572
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
P YG R+RM+ADN+FPN +A+ +A D F K +S++L+
Sbjct: 573 PVYGFRERMKADNIFPNSVIASLLAATDPFNKKTLSDMLE 612
>gi|357131430|ref|XP_003567340.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 612
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/461 (55%), Positives = 358/461 (77%), Gaps = 2/461 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
++AP + TL K+ +GN + R+++ A+ NLR RR + KALQL EWLE +K ++ +E
Sbjct: 153 LEAPWNDVSGTLKKWVNDGNTVDRSDVFFAVLNLRRRRFFSKALQLLEWLEESKLIELVE 212
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS LDL+AK+ G+ KAE +I IP S RGE+VYRTLLANCVA NVKKAEEVFN+MK
Sbjct: 213 RDYASRLDLMAKVHGIYKAEKFIDNIPASLRGEIVYRTLLANCVAEVNVKKAEEVFNKMK 272
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFPVT FA NQLL+LYKR+DKKK++DVL +MEKE+VK + F+YK+L+D KG S D+ G
Sbjct: 273 DLGFPVTVFAINQLLLLYKRVDKKKISDVLTMMEKEDVKPSLFTYKLLVDTKGASRDIEG 332
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M++VV++M++EGI PD QA +AKHY+ GG +EKAEA+L+ MEGD +KE+R C++++P
Sbjct: 333 MEKVVQSMEAEGITPDLLLQATIAKHYIFGGHREKAEAILESMEGD-MKENRNACKMVMP 391
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA LGK D V RIWK+C+SN LD C++AIEA+G+L VE+AE VF M KTWK LS+K
Sbjct: 392 LYAFLGKKDDVERIWKVCQSNTRLDECLSAIEAFGRLGDVEKAEEVFGNMFKTWKTLSSK 451
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+Y A+++VYA+ ++ KGK+L K+M E GC +G D+LVKL+V+ GEVEKA+S+L K
Sbjct: 452 YYNAMMRVYANQNLMDKGKELAKRMEEDGCRLGISTLDSLVKLYVDAGEVEKAESLLHKL 511
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
+NK KP +SSY++++D Y+K GD+H++EK+F ++RQ+GY R +Q+Q L+ AY++AK
Sbjct: 512 SVKNKMKPQYSSYLMLLDSYSKIGDVHNSEKVFSKLRQMGYNGRIRQYQLLLHAYLHAKA 571
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
P YG R+RM+ADN+FPN +A+ +A D F +K ++S++L+
Sbjct: 572 PVYGFRERMKADNIFPNSVIASLLAATDPFNKKKSISDILE 612
>gi|297596551|ref|NP_001042753.2| Os01g0280400 [Oryza sativa Japonica Group]
gi|255673117|dbj|BAF04667.2| Os01g0280400, partial [Oryza sativa Japonica Group]
Length = 426
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/425 (56%), Positives = 334/425 (78%), Gaps = 1/425 (0%)
Query: 37 RRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVY 96
RR LQL E++E +K D ERDYAS +DL+AK+ G+ KAE YI+ +P S RGEVVY
Sbjct: 2 RRYLLHFLQLLEYVEESKLFDLGERDYASRVDLVAKVHGIYKAEKYIENVPASHRGEVVY 61
Query: 97 RTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKE 156
RTLLANCVA NVKK E+VFN+MKD GFPVT F+CNQLL+LYKR+DKKK+ DVL +MEKE
Sbjct: 62 RTLLANCVAIANVKKTEQVFNKMKDLGFPVTVFSCNQLLLLYKRVDKKKLGDVLTMMEKE 121
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
NVK + F+YK+L+D KG + D+ M++V++AM+++GIEPD QA +A+HY+ GG +EKA
Sbjct: 122 NVKPSLFTYKLLVDTKGAARDIEDMEKVIQAMQADGIEPDLLIQATIARHYIFGGYREKA 181
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGK 276
EA+L+++EGD++ E+R C+ +LPLYA LGK V RIWK+CE N LD CM+AIEA+GK
Sbjct: 182 EAILEQIEGDDINENRSACKFVLPLYAFLGKKADVERIWKVCEVNARLDECMSAIEAFGK 241
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
L VE+AE +F+ M KTWK LS ++Y A+LKVYA+ K+ KGK+L K+M + GC +GP
Sbjct: 242 LGDVEKAEEIFENMFKTWKTLSFEYYNAMLKVYANKKLFDKGKELAKRMGDDGCRLGPST 301
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
D+LVKL+ + GEVEKADSIL K +NK KP++++Y++++D Y+K+GD+H+ EK+F ++
Sbjct: 302 LDSLVKLYSDAGEVEKADSILHKLSYKNKIKPLYTTYLMLLDSYSKKGDVHNAEKLFSKV 361
Query: 397 RQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAV 455
RQ+GY R +Q+Q L++AY+NAKTP YG ++RM+AD++FPN+A+A+ +A D F RK A+
Sbjct: 362 RQMGYTGRIRQYQLLLEAYLNAKTPPYGFKERMKADDIFPNRAVASLLAATDPFNRKNAM 421
Query: 456 SELLD 460
SELLD
Sbjct: 422 SELLD 426
>gi|414877074|tpg|DAA54205.1| TPA: hypothetical protein ZEAMMB73_351899 [Zea mays]
Length = 613
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/461 (53%), Positives = 348/461 (75%), Gaps = 1/461 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
++AP + S L K+A++GN L R E+ + NLR R+ Y KAL+L E+++ ++ L+ E
Sbjct: 153 LEAPRHQVTSALEKWAKDGNALDRGELYYVLLNLRKRKWYHKALELVEYVQNSQLLELGE 212
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYA+ +DL AK+ GL KAE YI+KIP S R EVVYRTLLANCVA NVKK+E+VFNRMK
Sbjct: 213 RDYAARVDLTAKVYGLHKAEQYIEKIPASHRSEVVYRTLLANCVAEGNVKKSEQVFNRMK 272
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFPVT+F+ NQLL+LYKRLDKKK+ADVL +MEKE+VK + F+YK+L+D KG D+
Sbjct: 273 DLGFPVTTFSSNQLLLLYKRLDKKKIADVLTMMEKEDVKPSIFTYKVLVDAKGMVGDVEA 332
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M++VVE+M +GIEPD + A +A+ Y+ G+++KAE +L+ MEGD+++++R C+ LLP
Sbjct: 333 MEKVVESMVKDGIEPDLTFNATIARQYIFNGQRDKAETLLESMEGDDIQKNRAACKFLLP 392
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA LG D V RIWK+CE N +D C++AI+A+GKL VE+AE VF+ M WK LS+K
Sbjct: 393 LYAFLGNGDAVERIWKVCEDNTRIDECLSAIDAFGKLGNVEKAEKVFEDMFVKWKNLSSK 452
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+YTALLKVYA+ +L KG++L K+M E G G +ALVKL+ + GEVEKA+S+L K
Sbjct: 453 YYTALLKVYANQNLLDKGEELAKRMDEEGAKFGTPTLNALVKLYADAGEVEKAESLLHKL 512
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
+N KP +SSYM ++D Y+K+GD+H++EK+F+++RQ+GY R + +Q L+ +Y++AK
Sbjct: 513 SLKNNVKPSYSSYMTLLDSYSKKGDVHNSEKVFNKLRQIGYTGRIRMYQFLLHSYLHAKA 572
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
PAYG ++RM+ADN+FPN A+A +A D F +K +VS+LLD
Sbjct: 573 PAYGFKERMKADNIFPNSAVATLIAATDPFVKKKSVSDLLD 613
>gi|226530081|ref|NP_001147602.1| DNA-binding protein [Zea mays]
gi|195612448|gb|ACG28054.1| DNA-binding protein [Zea mays]
Length = 622
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/461 (53%), Positives = 347/461 (75%), Gaps = 1/461 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
++AP + S L K+A++GN R E+ + NLR R Y KAL+L EW++ ++ +F+E
Sbjct: 162 LEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVE 221
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYA+ LDL AK+ GL KAE I+KIP S RGE+VYRTLLANCV+ +N+KK+E+VFNRMK
Sbjct: 222 RDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMK 281
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFPVT F+ NQLL+LYKRLD+KK+ADVL +MEKE+VK + F+YKIL+D KG D+
Sbjct: 282 DLGFPVTQFSFNQLLLLYKRLDRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEA 341
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M++V+E+M+ + IEPD + A +A+HY+ G++EKAEA+LK MEGD+++++R C+ LLP
Sbjct: 342 MEKVIESMEKDSIEPDLTFNATIARHYIFYGQREKAEALLKAMEGDDIQKNRAACKTLLP 401
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
L+A LG +D V RIWK CE N + ++AIEA+GKL VE+AE VF+ M WK LS+K
Sbjct: 402 LHAFLGNSDAVERIWKACEDNTRVAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLSSK 461
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y ALLKVYADH +L KGK+L K+M E+ G DALVKL+VE GEVEKA+S++ K
Sbjct: 462 FYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEKAESLVHKL 521
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
QN KP++++YM ++D Y+K+GD+ ++EK+F+++RQ GY R + +Q+L+ AY++AK
Sbjct: 522 SIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQSLLHAYVHAKA 581
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
PAYG R+RM+ADN+FPN A++ +A D F +K ++S+LLD
Sbjct: 582 PAYGFRERMKADNIFPNSAVSTLIAATDPFVKKKSISDLLD 622
>gi|413946863|gb|AFW79512.1| DNA-binding protein [Zea mays]
Length = 622
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 245/461 (53%), Positives = 344/461 (74%), Gaps = 1/461 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
++AP + S L K+A++GN R E+ + NLR R Y KAL+L EW++ ++ +F+E
Sbjct: 162 LEAPRHQVTSALEKWAKDGNAFDRGELYYVLLNLRKRHWYSKALELVEWVQKSQLFEFVE 221
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYA+ LDL AK+ GL KAE I+KIP S RGE+VYRTLLANCV+ +N+KK+E+VFNRMK
Sbjct: 222 RDYAAHLDLTAKVYGLHKAEQTIEKIPASCRGEIVYRTLLANCVSASNIKKSEQVFNRMK 281
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D GFPVT F+ NQLL+LYKRLD+KK+ADVL +MEKE+VK + F+YKIL+D KG D+
Sbjct: 282 DLGFPVTQFSFNQLLLLYKRLDRKKIADVLAMMEKEDVKPSLFTYKILVDAKGSVGDIEA 341
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M++V+E+M+ + IEPD + A +A+HY+ G++EKAEA+LK MEGD+++++R C+ LLP
Sbjct: 342 MEKVIESMEKDSIEPDLTFNATIARHYIFYGQREKAEALLKAMEGDDIQKNRAACKTLLP 401
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
L+A LG +D V RIWK CE N + ++AIEA+GKL VE+AE VF+ M WK LS+K
Sbjct: 402 LHAFLGNSDAVERIWKACEDNTRVAESVSAIEAFGKLGDVEKAEKVFEDMLVHWKTLSSK 461
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y ALLKVYADH +L KGK+L K+M E+ G DALVKL+VE GEVEKA+S++ K
Sbjct: 462 FYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEKAESLVHKL 521
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
QN KP++++YM ++D Y+K+GD+ ++EK+F+++RQ GY R + +Q L+ AY+ AK
Sbjct: 522 SIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQVLLHAYVRAKA 581
Query: 421 PAYGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
PAYG R+RM+ADN+FPN ++ +A D F +K ++S+LLD
Sbjct: 582 PAYGFRERMKADNIFPNSVVSTLIAATDPFVKKKSISDLLD 622
>gi|22331104|ref|NP_188178.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273796|sp|Q9LRP6.1|PP234_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g15590, mitochondrial; Flags: Precursor
gi|11994226|dbj|BAB01348.1| DNA-binding protein [Arabidopsis thaliana]
gi|20856658|gb|AAM26678.1| AT3g15590/MQD17_5 [Arabidopsis thaliana]
gi|27363266|gb|AAO11552.1| At3g15590/MQD17_5 [Arabidopsis thaliana]
gi|332642175|gb|AEE75696.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 610
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/454 (53%), Positives = 347/454 (76%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ L K+ +EG DLS+AE+ LA+ NLR R+ Y LQL EWL N + +F E +YAS
Sbjct: 156 SVKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQ 215
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDL+AK+ LQKAE +++ IPES RGEVVYRTLLANCV ++V KAE++FN+MK+ FP
Sbjct: 216 LDLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPT 275
Query: 127 TSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVE 186
+ FACNQLL+LY D+KK++DVLLLME+EN+K ++ +Y LI+ KG + D+TGM+++VE
Sbjct: 276 SVFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVE 335
Query: 187 AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
+K EGIE D Q+ILAK+Y+ G KE+A+ ++KE+EG L++ W CR LLPLYA++G
Sbjct: 336 TIKEEGIELDPELQSILAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIG 395
Query: 247 KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+D V R+ + + NP D C++AI+AWGKL +VEEAEAVF+R+ + +K Y AL+
Sbjct: 396 DSDNVRRLSRFVDQNPRYDNCISAIKAWGKLKEVEEAEAVFERLVEKYKIFPMMPYFALM 455
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
++Y ++KML+KG+DLVK+M +G IGP W ALVKL+++ GEV KA+ IL +A + NK
Sbjct: 456 EIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELILNRATKDNKM 515
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+PMF++YM I+++YAKRGD+H+TEK+F +M++ Y A+ Q++T++ AYINAKTPAYG+
Sbjct: 516 RPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYINAKTPAYGMI 575
Query: 427 DRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
+RM+ADNVFPNK+LAA++AQV+ F+K VS LLD
Sbjct: 576 ERMKADNVFPNKSLAAKLAQVNPFKKCPVSVLLD 609
>gi|297834428|ref|XP_002885096.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
gi|297330936|gb|EFH61355.1| hypothetical protein ARALYDRAFT_479008 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/454 (54%), Positives = 345/454 (75%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ L K+ +EG DLS+AE++LA+ +LR R+ Y LQL EWL N + +F E +YAS
Sbjct: 151 SVKHVLEKWVKEGKDLSQAEVSLAIFHLRKRKYYAMCLQLWEWLGANTQFEFTEANYASQ 210
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDL+AK+ LQKAE++++ IPESFRGEVVYRTLLANCV ++V KAE++FN+MK+ FP
Sbjct: 211 LDLVAKVHSLQKAENFLKDIPESFRGEVVYRTLLANCVLKHHVNKAEDLFNKMKELKFPT 270
Query: 127 TSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVE 186
+ FACNQLL+LY D+KK++DVLLLME+EN+K ++ +Y+ LI+ KG + D+TGM+++VE
Sbjct: 271 SVFACNQLLLLYSMHDRKKISDVLLLMERENIKPSRGTYQFLINSKGLAGDITGMEKIVE 330
Query: 187 AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
MK EGIE D QA LAK+Y+ G KE+A+ ++KE+EG L++ W CR LLPLYA++G
Sbjct: 331 TMKEEGIEVDPELQATLAKYYIRAGLKERAQDLMKEIEGKGLQQTPWVCRSLLPLYADIG 390
Query: 247 KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+D V R+ + N D C++AI AWGKL +VEEAEAVF+R+ + +K Y AL+
Sbjct: 391 DSDNVRRLSTFVDQNLRYDNCISAIRAWGKLKEVEEAEAVFERLVEKYKIFPMLPYFALM 450
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
++Y ++KML+KGKDLVK+M +G IGP W ALVKL+++ GEV KA+ IL +A + NK
Sbjct: 451 EIYTENKMLAKGKDLVKRMGNAGVTIGPSTWHALVKLYIKAGEVGKAELILNRATKDNKM 510
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+PMF SYM I+++YAKRGD+H+TEK+F +M++ Y A+ Q++T++ AYI AKTPAYG+
Sbjct: 511 RPMFISYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVLLAYIKAKTPAYGMF 570
Query: 427 DRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
+RM+ADNVFPNK+LAA++AQV+ F+K VS LLD
Sbjct: 571 ERMKADNVFPNKSLAAKLAQVNPFKKCPVSVLLD 604
>gi|224072985|ref|XP_002303946.1| predicted protein [Populus trichocarpa]
gi|222841378|gb|EEE78925.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/423 (54%), Positives = 317/423 (74%), Gaps = 9/423 (2%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN 102
+LQ SEWLE +K+ DF ERDYA LD IAK+ GL KAE +I+KIPESFRG++VY+TLLA+
Sbjct: 33 SLQFSEWLERSKQTDFTERDYACHLDCIAKVLGLWKAEKFIEKIPESFRGKLVYQTLLAS 92
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ 162
CV+ N+KKAE VF +M+D G P+T AC Q++I+YKRL+KKK+ ++LL+M+ +N+K +
Sbjct: 93 CVSVLNIKKAESVFRKMRDLGLPITVEACEQMIIIYKRLEKKKIPNILLMMKDQNIKPSF 152
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+YK+LID K Q ND TGM+++VEAM++EG+E D A++A+HY+S G K+KA+ +LK+
Sbjct: 153 LTYKLLIDAKCQFNDTTGMEKLVEAMRNEGMELDVFALAVIARHYISVGLKDKADLILKQ 212
Query: 223 ME-----GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKL 277
+E G L R LL LYA LG AD+V RIWK C+++P C+AAI AWGKL
Sbjct: 213 IEKRKQKGGGLGARR----SLLSLYASLGNADEVGRIWKECKADPKQSECIAAIRAWGKL 268
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
KVEEAEAV + M +TWK + +YT+LL VY D+ + SKGKDLV+QM + G GPL W
Sbjct: 269 GKVEEAEAVSEMMLQTWKNPTFGYYTSLLNVYIDNNLTSKGKDLVEQMGDIGSWAGPLTW 328
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
DALV+L+++ G+VEKA SILLK + + +P++++ + +M+ YAKRGDIH+TEK+F MR
Sbjct: 329 DALVRLYIKSGDVEKAHSILLKVARMKRKRPLYTTCIAVMEHYAKRGDIHNTEKLFQSMR 388
Query: 398 QVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
++GY ARFK F+ LV AYINAKTP YG+R RM+ADN++P K A ++A VD FR+ +S
Sbjct: 389 ELGYTARFKPFEILVDAYINAKTPIYGLRARMKADNLYPKKEFAGKMALVDCFRRAELSN 448
Query: 458 LLD 460
LLD
Sbjct: 449 LLD 451
>gi|148906608|gb|ABR16456.1| unknown [Picea sitchensis]
Length = 600
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/457 (50%), Positives = 317/457 (69%), Gaps = 2/457 (0%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
I + S+L ++ +GN L+R E+ + +LR RRM+ + L++S+WLE K ERDYAS
Sbjct: 144 IDLPSSLEQWLADGNVLTRREVVITFVHLRNRRMFKRLLKVSDWLEGKKPFKKTERDYAS 203
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
LD+I K+ G+ K E Y IP RG+ Y TLLAN + NV+KAEE+F +MK +GF
Sbjct: 204 RLDVITKILGIFKGEKYFASIPSDMRGQRAYGTLLANYSSTCNVEKAEEIFKKMKAEGFS 263
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+T+F NQLL+LYKRLDKKK+ DVL +ME E VK T F+YKILID+KG D+ GM+QV
Sbjct: 264 LTAFEYNQLLLLYKRLDKKKIQDVLKMMEDEGVKPTIFTYKILIDVKGWMGDIGGMEQVA 323
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E MKSE IE DS T +LA+HY+ G EKAE +LKE+E +LK+ R ++LLPLYAEL
Sbjct: 324 ENMKSEDIEMDSGTLELLARHYIRAGLAEKAEVVLKELENVSLKDKRSRLKMLLPLYAEL 383
Query: 246 GKADQVARIWKLCESNPW--LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
GK +V RIWK E+ P LD + AWGKL ++E+AE F+++ + KKLS KHY
Sbjct: 384 GKPTEVERIWKDFEAFPALRLDEYATGVVAWGKLGQIEKAEITFEKLLNSGKKLSAKHYN 443
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
ALL VYADH +L KGK+LVK+M+++GC I P WDAL++LHV GE+EKADSIL KA Q
Sbjct: 444 ALLNVYADHHLLLKGKELVKRMSDNGCTIEPPIWDALIRLHVNAGELEKADSILFKACNQ 503
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY 423
+ +P + + + I+++YA+RGD+ + EKIF RMRQ GY F +L+++Y NA+ PAY
Sbjct: 504 KQLRPKYWTMVTILEKYAERGDVANAEKIFDRMRQAGYTGSAGAFASLLKSYANARVPAY 563
Query: 424 GIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
G R+RM+AD ++ N L + + QVDAF+ + +LD
Sbjct: 564 GFRERMKADKIYLNGRLNSLMEQVDAFKSDTLEGILD 600
>gi|125557709|gb|EAZ03245.1| hypothetical protein OsI_25393 [Oryza sativa Indica Group]
Length = 610
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/461 (49%), Positives = 319/461 (69%), Gaps = 7/461 (1%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+DAP S+ L K+ E+GN L R + L + +L+ + MY KALQ EW+E K L+F +
Sbjct: 153 LDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWMERGKLLNFEK 212
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYA LDLIA+ G++ A+ YI+++P FR EV+Y TL+ NCV +++KAEEVF +K
Sbjct: 213 RDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKEIK 272
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D +T CNQ+++LYKR+ KVA VL+LMEKENVK + F+Y++LID+KG+SNDL G
Sbjct: 273 DLCLRLTVTLCNQMILLYKRIAPGKVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAG 332
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG--DNLKEHRWTCRLL 238
++ V+ MK+ GIEP +STQ ++A+ Y+ GG EKAEA++KEME N K+ R + L
Sbjct: 333 IEVVINEMKAYGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSL 392
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
L LYA L K + VARIW++C + P L+ ++AI+AWG+L +E+AE F+ M+ +KLS
Sbjct: 393 LHLYAALNKPNDVARIWEMC-TEPMLEDFLSAIKAWGELGLIEKAEETFEAMANAPEKLS 451
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
+K+Y A+L VYA +K+LSKGK V++M GC GPL WDAL+ L+V GEVEKADS LL
Sbjct: 452 SKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKADSFLL 511
Query: 359 KAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
++N KP+F+SY +M YAKRGDIH+TEKIF R++ VGY R + L++AY+N
Sbjct: 512 NVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYVN 571
Query: 418 AKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSEL 458
AK PA+G +RMR DNV P K + V +D +K ++ L
Sbjct: 572 AKVPAHGFLERMRGDNVRPTKKI---VTSLDTLQKGWIAGL 609
>gi|125599572|gb|EAZ39148.1| hypothetical protein OsJ_23575 [Oryza sativa Japonica Group]
Length = 610
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/461 (49%), Positives = 319/461 (69%), Gaps = 7/461 (1%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+DAP S+ L K+ E+GN L R + L + +L+ + MY KALQ EW+E K L+F +
Sbjct: 153 LDAPSNSLRHVLDKWIEDGNQLERNDAMLVLFHLKKQHMYRKALQFVEWMERGKLLNFEK 212
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYA LDLIA+ G++ A+ YI+++P FR EV+Y TL+ NCV +++KAEEVF +K
Sbjct: 213 RDYACHLDLIARSHGIETAQKYIKRVPLPFRNEVLYETLIVNCVLAGDIQKAEEVFKEIK 272
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D +T CNQ+++LYKR+ KVA VL+LMEKENVK + F+Y++LID+KG+SNDL G
Sbjct: 273 DLCLRLTVTLCNQMILLYKRIAPGKVASVLMLMEKENVKPSAFTYRLLIDLKGRSNDLAG 332
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG--DNLKEHRWTCRLL 238
++ V+ MK+ GIEP +STQ ++A+ Y+ GG EKAEA++KEME N K+ R + L
Sbjct: 333 IEVVLNEMKAYGIEPSTSTQTMVARFYIHGGLTEKAEAVVKEMEAQLSNSKDGRHVIKSL 392
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
L LYA L K + VARIW++C + P L+ ++AI+AWG+L +E+AE F+ M+ +KLS
Sbjct: 393 LHLYAALNKPNDVARIWEMC-TEPMLEDFLSAIKAWGELGLIEKAEETFEAMANAPEKLS 451
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
+K+Y A+L VYA +K+LSKGK V++M GC GPL WDAL+ L+V GEVEKADS LL
Sbjct: 452 SKYYNAMLNVYAQNKLLSKGKQFVERMCRDGCPNGPLTWDALINLYVNSGEVEKADSFLL 511
Query: 359 KAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
++N KP+F+SY +M YAKRGDIH+TEKIF R++ VGY R + L++AY+N
Sbjct: 512 NVAEENPDRKPLFTSYFFLMKGYAKRGDIHNTEKIFDRLKNVGYAPRPLHYAVLLEAYVN 571
Query: 418 AKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSEL 458
AK PA+G +RMR DNV P K + V +D +K ++ L
Sbjct: 572 AKVPAHGFLERMRGDNVRPTKKI---VTSLDTLQKGWIAGL 609
>gi|357119107|ref|XP_003561287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Brachypodium distachyon]
Length = 576
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/460 (47%), Positives = 317/460 (68%), Gaps = 2/460 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+DA +S+ S L K+ E+GN L R E+ L + +L+ +R+Y KA Q EW+E L+F E
Sbjct: 117 LDAHSLSVKSVLDKWIEDGNQLERNEVLLVLFHLKKQRLYWKAFQFMEWIERGHLLNFEE 176
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYA LDLIA+ G++ A YI ++P+ FR EV+Y TLL NCV +++KAEEVF ++
Sbjct: 177 RDYACHLDLIARNTGIEDARKYIDRVPKPFRNEVLYETLLVNCVRARDIQKAEEVFREIR 236
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
D P+T ACNQ+++LYKR+ + KVAD+++LMEKEN+K + F+YK++ID+KG+SND++G
Sbjct: 237 DLSLPLTVSACNQMILLYKRVARTKVADIIMLMEKENIKPSPFTYKLIIDLKGRSNDISG 296
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
++ + MK+ G+EPD TQ ++AK Y+SGG EKA+A++ E+E + +K+ R R LL
Sbjct: 297 VEVTLNEMKAAGVEPDFVTQTMVAKFYISGGLIEKAKAVVSEIEMEYMKDKRHAVRSLLH 356
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA L K D+VARIWKLC + P LD MAAIEAWGKL +E+AE F+ M + +KLS+K
Sbjct: 357 LYAALSKPDEVARIWKLC-TEPKLDDFMAAIEAWGKLGCIEQAEETFEAMLEATQKLSSK 415
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+Y +L VYA++K++ KGK V++M+ GC GPL WDALVKL+V GEV KADS L A
Sbjct: 416 YYNGMLNVYAENKLMDKGKKFVERMSFDGCPNGPLTWDALVKLYVNSGEVAKADSFLQNA 475
Query: 361 QQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+QN +P + SY+ ++ YAK GDI++ EK+F R++ + Y R + L++AY+NAK
Sbjct: 476 TEQNPDRRPTYGSYIYLLMAYAKMGDIYNAEKMFDRLKNIRYPGRKPPYPVLLEAYVNAK 535
Query: 420 TPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
+G +RMRAD V P K + + + + V +L+
Sbjct: 536 VRPHGFIERMRADGVRPIKKVMEHLKFLGKLPRGGVPQLI 575
>gi|307136024|gb|ADN33878.1| DNA-binding protein [Cucumis melo subsp. melo]
Length = 470
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/332 (64%), Positives = 261/332 (78%), Gaps = 1/332 (0%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
AP +S+ S L K+ EG +LSRA+I+L M LR RRM+GKAL+ SEWLE N KL +RD
Sbjct: 140 APGLSVPSALDKWVSEGKELSRADISLTMLYLRRRRMFGKALKFSEWLEANGKL-VTDRD 198
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
YAS LDLI KLRGL+ AE+YI KIP+SF+GEVVYRTLLANCV NV+KAEEVFN+MKD
Sbjct: 199 YASQLDLIGKLRGLRMAENYISKIPKSFQGEVVYRTLLANCVMSTNVRKAEEVFNKMKDL 258
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
FP+T+FACNQLL+LYKR DKKK+ADVLLLMEKENVK + F+YKILID KG SND++GM+
Sbjct: 259 EFPITAFACNQLLLLYKRTDKKKIADVLLLMEKENVKPSPFTYKILIDAKGLSNDISGME 318
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
QVV+ MK+EGI+ T +LAKHYVS G K+KA+A LKE E N K R CR LLPLY
Sbjct: 319 QVVDTMKAEGIKLGVGTLLLLAKHYVSAGLKDKAKATLKETEEINSKGSRRPCRFLLPLY 378
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
EL D+V R+W++CESNP ++ CMAAI AWGKL V+EAE +F R+ KT KKLST+HY
Sbjct: 379 GELQMEDEVRRLWEICESNPHVEECMAAIVAWGKLKNVQEAEKIFDRVVKTGKKLSTRHY 438
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
+ ++ VY D KML+KGK+LV QMAESGC + P
Sbjct: 439 STMMNVYRDSKMLTKGKELVNQMAESGCSMDP 470
>gi|414884017|tpg|DAA60031.1| TPA: hypothetical protein ZEAMMB73_016344 [Zea mays]
Length = 703
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/451 (45%), Positives = 312/451 (69%), Gaps = 3/451 (0%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+D S+ L + + GN L R ++ + + +LR +RMY KAL+ EW+E K L+F E
Sbjct: 255 LDTSMSSLMPVLDGWVKIGNRLERDKVNMVLFHLRKQRMYNKALKFVEWIERRKLLNFEE 314
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
RDYAS LDLIA+ G++ A+ YI+++PE+FR EV+Y TLL NCV ++ +KAE+VFN ++
Sbjct: 315 RDYASHLDLIARNYGVEAAQKYIERVPEAFRSEVLYETLLVNCVCRDDAQKAEQVFNEIR 374
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
+ P+T ACNQ+L+LYKR+ + KV D+L LMEKEN+K + F+YK++ID+K +SND+ G
Sbjct: 375 ELSLPLTISACNQMLLLYKRVSRNKVVDILTLMEKENIKYSIFTYKLMIDLKVRSNDILG 434
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M+QV+ +MK G+EP+ + Q ++AK Y+SG EKAE ++ ME ++K +R R LL
Sbjct: 435 MEQVLNSMKENGLEPNFTIQTMVAKFYISGCFTEKAEEVINAMEV-HVKANRHAVRSLLD 493
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LYA LG+ V R+W LC + P L+ +AAI+AW KL +E AE +F + KT+ KL++K
Sbjct: 494 LYAILGRPVDVERVWNLC-AEPKLEDFLAAIKAWSKLGHIERAEEIFDVLVKTFPKLTSK 552
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
++ A+L+VYA++K+L K K +++M GC IGPL WDA+VKL+V GE+ KADS L+
Sbjct: 553 YFNAMLEVYAENKLLDKSKKFIERMCLDGCTIGPLTWDAVVKLYVNLGELSKADSFLMNV 612
Query: 361 QQQNKFK-PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ N + P+FSSY++++ YA++GDIH+ EKIF R++Q + AR + L+ AY +A+
Sbjct: 613 TEDNPDRHPLFSSYVILLKAYAEKGDIHNAEKIFDRVKQTNFPARTLPYNLLLAAYASAQ 672
Query: 420 TPAYGIRDRMRADNVFPNKALAAQVAQVDAF 450
YG R+RM+AD P K+ Q+ Q+D+
Sbjct: 673 VTPYGFRERMKADKFSPGKSQIEQLKQLDSL 703
>gi|242043362|ref|XP_002459552.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
gi|241922929|gb|EER96073.1| hypothetical protein SORBIDRAFT_02g006520 [Sorghum bicolor]
Length = 421
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/423 (46%), Positives = 291/423 (68%), Gaps = 3/423 (0%)
Query: 29 LAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPE 88
+A+ +LR +RMY KAL+ EW++ K L+F ERDYAS LDL+A+ G++ AE YI+++PE
Sbjct: 1 MALFHLRKQRMYNKALKFMEWIDRRKLLNFEERDYASHLDLVARNHGIEAAEKYIERVPE 60
Query: 89 SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD 148
+FR EV+Y TLL NCV ++ +KAE+VFN +++ P+T ACNQ+L+LYKR+ + KV D
Sbjct: 61 AFRSEVLYETLLVNCVCRDDAQKAEQVFNEIRELSLPLTVSACNQMLLLYKRVSRNKVVD 120
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
+L LME EN+K + F+YK++ID+KG+SND GM+ V+ MK G EPD Q ++AK Y+
Sbjct: 121 ILKLMENENIKPSLFTYKLMIDLKGRSNDTLGMESVLNLMKENGFEPDFGIQTMVAKFYI 180
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM 268
SG EKAE + ME + +R R LL LYA LG+ D V RIW LC + P L+ +
Sbjct: 181 SGDLAEKAEEVTNAMEV-YVNANRHAIRSLLDLYAILGRPDDVERIWNLC-TEPKLEDFL 238
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
AAI+AWGKL +E AE F + KT KL++K++ A+L VYA++++L KGK +++M+
Sbjct: 239 AAIKAWGKLGHIERAEETFDALVKTSPKLTSKYFNAMLYVYAENELLDKGKKFIERMSLD 298
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK-PMFSSYMLIMDQYAKRGDIH 387
GC PL WDA+VKL+V GE+ KADS L + N + P+F SY++++ +A++GDIH
Sbjct: 299 GCPSSPLTWDAVVKLYVNSGELAKADSFLANVTEDNPDRYPLFRSYVILLKAFAEKGDIH 358
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQV 447
+ EKIF+R++Q Y AR + L+ AY NA+ YG R+RM+AD P+K+ ++ ++
Sbjct: 359 NAEKIFNRLKQTSYPARTLPYNLLLAAYANAQVTPYGFRERMKADKYSPSKSQIERLNRL 418
Query: 448 DAF 450
D+
Sbjct: 419 DSL 421
>gi|115471209|ref|NP_001059203.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|34394024|dbj|BAC84055.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113610739|dbj|BAF21117.1| Os07g0222700 [Oryza sativa Japonica Group]
gi|117380751|gb|ABK34463.1| DNA-binding protein [Oryza sativa Japonica Group]
Length = 411
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/371 (50%), Positives = 260/371 (70%), Gaps = 7/371 (1%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL 150
R EV+Y TL+ NCV +++KAEEVF +KD +T CNQ+++LYKR+ KVA VL
Sbjct: 44 RNEVLYETLIVNCVLAGDIQKAEEVFKEIKDLCLRLTVTLCNQMILLYKRIAPGKVASVL 103
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
+LMEKENVK + F+Y++LID+KG+SNDL G++ V+ MK+ GIEP +STQ ++A+ Y+ G
Sbjct: 104 MLMEKENVKPSAFTYRLLIDLKGRSNDLAGIEVVLNEMKAYGIEPSTSTQTMVARFYIHG 163
Query: 211 GRKEKAEAMLKEMEG--DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM 268
G EKAEA++KEME N K+ R + LL LYA L K + VARIW++C + P L+ +
Sbjct: 164 GLTEKAEAVVKEMEAQLSNSKDGRHVIKSLLHLYAALNKPNDVARIWEMC-TEPMLEDFL 222
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+AI+AWG+L +E+AE F+ M+ +KLS+K+Y A+L VYA +K+LSKGK V++M
Sbjct: 223 SAIKAWGELGLIEKAEETFEAMANAPEKLSSKYYNAMLNVYAQNKLLSKGKQFVERMCRD 282
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIH 387
GC GPL WDAL+ L+V GEVEKADS LL ++N KP+F+SY +M YAKRGDIH
Sbjct: 283 GCPNGPLTWDALINLYVNSGEVEKADSFLLNVAEENPDRKPLFTSYFFLMKGYAKRGDIH 342
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQV 447
+TEKIF R++ VGY R + L++AY+NAK PA+G +RMR DNV P K + V +
Sbjct: 343 NTEKIFDRLKNVGYAPRPLHYAVLLEAYVNAKVPAHGFLERMRGDNVRPTKKI---VTSL 399
Query: 448 DAFRKTAVSEL 458
D +K ++ L
Sbjct: 400 DTLQKGWIAGL 410
>gi|62319738|dbj|BAD95295.1| hypothetical protein [Arabidopsis thaliana]
Length = 216
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 181/216 (83%)
Query: 245 LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
LG+ D+V RIWK+CES P+ + +AAI+A+GKLNKV+EAEA+F+++ K ++ S+ Y+
Sbjct: 1 LGREDEVKRIWKICESKPYFEESLAAIQAFGKLNKVQEAEAIFEKIVKMDRRASSSTYSV 60
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
LL+VY DHKMLSKGKDLVK+MAESGC I WDAL+KL+VE GEVEKADS+L KA +Q+
Sbjct: 61 LLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKADSLLDKASKQS 120
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG 424
K M +S+M IMD+Y+KRGD+H+TEKIF +MR+ GY +R +QFQ L+QAYIN K+PAYG
Sbjct: 121 HTKLMMNSFMYIMDEYSKRGDVHNTEKIFLKMREAGYTSRLRQFQALMQAYINTKSPAYG 180
Query: 425 IRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
+RDR++ADN+FPNK++AAQ+AQ D F+KTA+S++LD
Sbjct: 181 MRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 216
>gi|449474117|ref|XP_004154078.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like, partial [Cucumis sativus]
Length = 263
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 172/212 (81%)
Query: 46 LSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVA 105
SEWLE N +L+F ERDYAS + LIAK++GL KAESYI KIP+SF+GEVV+R LLAN V
Sbjct: 52 FSEWLEANGQLEFNERDYASRVHLIAKVQGLHKAESYIAKIPKSFQGEVVHRALLANYVV 111
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSY 165
NNV+KAEEVFN++KD FP++ FA NQ+L+LYK++D++K+ADVLLLMEKEN+K F+Y
Sbjct: 112 ANNVEKAEEVFNKIKDLEFPMSIFAYNQMLVLYKKIDRRKIADVLLLMEKENIKPCPFTY 171
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
KILID KG SND++GM+QVV++MK+EGIE D ST ++LAKHYVS G K KA+A+LKE+E
Sbjct: 172 KILIDGKGLSNDISGMEQVVDSMKAEGIELDVSTLSLLAKHYVSCGLKVKAKAILKEIEE 231
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
N +W CR+LLP Y +L D+V R+W++
Sbjct: 232 TNSNGPQWLCRILLPFYGKLQMEDEVRRLWEI 263
>gi|351723913|ref|NP_001238319.1| uncharacterized protein LOC100500196 [Glycine max]
gi|255629651|gb|ACU15173.1| unknown [Glycine max]
Length = 147
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/147 (63%), Positives = 121/147 (82%)
Query: 314 MLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSY 373
ML KGKDL+K+M + GC IGPL WDA+VKL+V+ GEVEKADS+L KA QQ++ KP+FS+Y
Sbjct: 1 MLMKGKDLIKRMGDGGCRIGPLTWDAIVKLYVQAGEVEKADSVLQKAAQQSQMKPIFSTY 60
Query: 374 MLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADN 433
+ I++QYA RGDIH++EKIF RM+Q Y ++ K +Q L+ AYINAK PAYGIRDR+RAD+
Sbjct: 61 LTILEQYANRGDIHNSEKIFFRMKQADYPSKAKMYQVLMNAYINAKVPAYGIRDRLRADS 120
Query: 434 VFPNKALAAQVAQVDAFRKTAVSELLD 460
++PN+ LA Q+ QVD FRK VS+LLD
Sbjct: 121 IYPNRNLANQLVQVDGFRKNPVSDLLD 147
>gi|168063926|ref|XP_001783918.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664548|gb|EDQ51263.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 240/442 (54%), Gaps = 7/442 (1%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S+ + ++ EG L + + + LR R+ Y +A+++S+W+ K + + D
Sbjct: 1 PQKSVVPLIKEWLNEGYALDKRVLVSILIRLRRRQRYKQAMEISDWMSEEKNIKWEMADN 60
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
+DL AK++ AE ++ P F+ E+ Y TLL N +KA+ + ++K G
Sbjct: 61 IVRIDLKAKMKQFAVAEQLLEDSPPEFKTELAYHTLLRNYADYQMAQKADALLEKLKGTG 120
Query: 124 FPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
FA NQ+++LYKR KV ++L M+ V ++Y IL+D+K +S D+ GM+
Sbjct: 121 ILTLPFAFNQMMLLYKRKGMMNKVTEILADMKTHGVPKDVYTYNILMDVKARSGDIEGME 180
Query: 183 QVVEAMKS-EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
++ E + + E ++ D++T LA V G +KA + LKEME ++ +R +L+
Sbjct: 181 KIFEELSADENVKADAATFGTLATFCVHAGLLDKARSYLKEMEEGDVFRNRSAYDILISQ 240
Query: 242 YAELGKADQVARIWKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
Y +G + V R+W+ +S P + + IEA+GKL VE+AE ++ MSK+ + +
Sbjct: 241 YGAVGDQEGVERVWEKVKSGPVVSNRSYITVIEAFGKLGMVEKAEELYGIMSKSKGLILS 300
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ + +LL YA ++ K + LV+ M + G + + LV +++ +++KA +++ +
Sbjct: 301 RQFNSLLSAYARQGLMEKAEKLVEDMVKLGRKKNAVTYHHLVTGYLKTDQLDKALAVMKE 360
Query: 360 AQ---QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
AQ +Q + + + + ++D YA+RGD+ S EK F +++ + + L++AYI
Sbjct: 361 AQGDSKQGRSRLWVETLISVLDAYAERGDVISAEKQFQDIKKAYPRPNIQVYNILLKAYI 420
Query: 417 NAKTPAYGIRDRMRADNVFPNK 438
++ PA G RM AD + PN+
Sbjct: 421 KSRVPALGFLQRMLADKLVPNE 442
>gi|168006155|ref|XP_001755775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693094|gb|EDQ79448.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 429
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 220/401 (54%), Gaps = 7/401 (1%)
Query: 44 LQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANC 103
+++S+W+ K + D +DL +K++ AE ++ P F+ E+ Y TLL N
Sbjct: 1 MEISDWMALEKGTKWELADNIVRIDLKSKMKQFTVAEQLLENSPPEFKTELAYHTLLKNY 60
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQ 162
V +KA + ++K G F+ NQ+++LYKR + K+ ++L M+ V
Sbjct: 61 VDHQMAQKAGALLEKLKSTGLLTLPFSFNQMMLLYKRKGMENKLPEILEDMKAHGVPKDV 120
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKS-EGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
++Y IL+D+K +S D+ GM+++ E +K+ E ++ D++T LA V G EKA+ LK
Sbjct: 121 YTYNILMDVKSRSGDIEGMEKIFEELKADENVKADAATFGTLATACVHAGLLEKAKVYLK 180
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD--VCMAAIEAWGKLNK 279
EME ++ +R +L+ Y +G D V R+W+ +S P + + IEA+GKL
Sbjct: 181 EMEEGDIFRNRSAYDILISQYGAVGDVDGVERVWEKVKSGPIVSNRSYITVIEAFGKLGM 240
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
VE+AE +++ MS++ + ++ + +LL Y ++ K + L+ M + G + +
Sbjct: 241 VEKAEELYEVMSQSKGLILSRQFNSLLSAYTRQGLMDKAEKLMDDMEKLGRKKNAITYHH 300
Query: 340 LVKLHVEGGEVEKADSILLKA---QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
LV +++ +++KA + + +A +Q + KP F + + ++D +A+RG++ + E+ F +
Sbjct: 301 LVTGYLKTDQLDKAVAAMKEALVDPKQGRSKPWFETLVAVLDAFAERGNVVNAEQQFQEI 360
Query: 397 RQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPN 437
++ + + L++AYIN++ PA G RM D + PN
Sbjct: 361 KKAYPRLNIQVYNILLKAYINSRVPALGFLHRMSTDKLVPN 401
>gi|194697044|gb|ACF82606.1| unknown [Zea mays]
Length = 172
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 124/168 (73%), Gaps = 1/168 (0%)
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
WK LS+K Y ALLKVYADH +L KGK+L K+M E+ G DALVKL+VE GEVEKA
Sbjct: 5 WKTLSSKFYNALLKVYADHNLLDKGKELAKRMDENRVRFGAPTLDALVKLYVEAGEVEKA 64
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+S++ K QN KP++++YM ++D Y+K+GD+ ++EK+F+++RQ GY R + +Q L+
Sbjct: 65 ESLVHKLSIQNHIKPIYNTYMTLLDSYSKKGDVRNSEKVFNKLRQSGYTGRIRMYQVLLH 124
Query: 414 AYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAF-RKTAVSELLD 460
AY+ AK PAYG R+RM+ADN+FPN ++ +A D F +K ++S+LLD
Sbjct: 125 AYVRAKAPAYGFRERMKADNIFPNSVVSTLIAATDPFVKKKSISDLLD 172
>gi|302801860|ref|XP_002982686.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
gi|300149785|gb|EFJ16439.1| hypothetical protein SELMODRAFT_53462 [Selaginella moellendorffii]
Length = 463
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 224/434 (51%), Gaps = 11/434 (2%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
L ++ EG + S EI AM L+ + +A ++S+W+ + L+ + + + L+L
Sbjct: 26 LHQWIAEGRE-SHGEIIAAMKRLKWLGRFKQAYEISDWVIKERSLELQKFHFINHLELTG 84
Query: 72 KLRGLQKAESYI-QKIPESF-RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSF 129
++ + A++++ K+P + + E T+ N V + + KA V MK+K T+
Sbjct: 85 RVVNMNAAKNFLLTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMKEKNLLTTAT 144
Query: 130 ACNQLLILYKRLDKKKVADVLLLMEKENVKLTQF--SYKILIDIKGQSNDLTGMDQVVEA 187
A N+L LY KK+ ++L E +++++ +Y ILI IK + D GM+++
Sbjct: 145 AFNKLFHLYAN-KKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTEGMERLFSK 203
Query: 188 MKSEGI-EPDSSTQAILAKHYVSGGRKEKAEAMLKE-MEGDNLKEHRWTCRLLLPLYAEL 245
MK +G P+ LA YV+ G EKA A LKE + D +E R ++ LYA +
Sbjct: 204 MKCDGDGTPNGEILCTLASGYVNAGDHEKAMAYLKEAVASDEFRESRRVHDKVIALYAAM 263
Query: 246 GKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
G+AD + RIW+ P + + +A I A+ K+ +++ AE VF +++ L HY
Sbjct: 264 GRADMIDRIWRFTRRFPVVSANSYVATIAAYEKVGRIDRAEKVFAELTEKRTLLRPAHYV 323
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
L + Y + + K + L++++ HI L++ LV +++ G + A L + ++
Sbjct: 324 PLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPKMAAETLTRMFEE 383
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY 423
+ P F + MLI+ ++AK D++S E +F MR+ Y + +L++AY+NA AY
Sbjct: 384 -RVPPCFDTVMLILKEHAKNADVNSAELLFQDMRRESYNKNVAAYNSLLEAYVNAGKHAY 442
Query: 424 GIRDRMRADNVFPN 437
RM D V PN
Sbjct: 443 RFLQRMATDKVAPN 456
>gi|302798913|ref|XP_002981216.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
gi|300151270|gb|EFJ17917.1| hypothetical protein SELMODRAFT_53460 [Selaginella moellendorffii]
Length = 463
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 223/434 (51%), Gaps = 11/434 (2%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
L ++ EG + S EI AM L+ + +A ++S+W+ + L+ + + + LDL
Sbjct: 26 LHQWIAEGRE-SHGEIIAAMKRLKWLGRFKQAYEISDWVIKERSLELQKFHFINHLDLTG 84
Query: 72 KLRGLQKAESYI-QKIPESF-RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSF 129
++ + A++++ K+P + + E T+ N V + + KA V MK+K T+
Sbjct: 85 RVVNMNAAKNFLLTKMPRVYAKSEAALITMFENYVIHSLLSKARLVLKLMKEKNLLTTAT 144
Query: 130 ACNQLLILYKRLDKKKVADVLLLMEKENVKLTQF--SYKILIDIKGQSNDLTGMDQVVEA 187
A N+L LY KK+ ++L E +++++ +Y ILI IK + D GM+++
Sbjct: 145 AFNKLFHLYAN-KKKEDGIPVILREMRDMRISPNVETYNILIGIKAKKGDTEGMERLFSK 203
Query: 188 MKSEGI-EPDSSTQAILAKHYVSGGRKEKAEAMLKE-MEGDNLKEHRWTCRLLLPLYAEL 245
MK +G P+ LA YV+ G EKA A LKE + + +E R ++ LYA +
Sbjct: 204 MKCDGDGTPNCEILCTLASGYVNAGDHEKAMAYLKEAVASEEFQESRRVHDKVIALYAAM 263
Query: 246 GKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
G+AD + RIW+ P + + +A I A+ K+ +++ AE VF +++ L HY
Sbjct: 264 GRADMIDRIWRFTRRFPVVSANSYVATIAAYEKVGRIDRAEKVFAELTEKRTLLRPAHYV 323
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
L + Y + + K + L++++ HI L++ LV +++ G + A L + ++
Sbjct: 324 PLFRAYCEGGEMGKAEKLLERIRHGNGHINNLSYHHLVAGYMKSGNPKMAAETLNRMFEE 383
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY 423
+ P F + MLI+ ++AK D+ S E +F MR+ Y + +L++AY+NA AY
Sbjct: 384 -RVPPCFDTVMLILKEHAKNADVSSAELLFQDMRRESYNKNVAAYNSLLEAYVNAGKHAY 442
Query: 424 GIRDRMRADNVFPN 437
RM D V PN
Sbjct: 443 RFLQRMATDKVAPN 456
>gi|224106481|ref|XP_002314181.1| predicted protein [Populus trichocarpa]
gi|222850589|gb|EEE88136.1| predicted protein [Populus trichocarpa]
Length = 525
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 218/459 (47%), Gaps = 19/459 (4%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ + EG + R ++ + LR R+ +AL++ EW+ + E DY+
Sbjct: 71 SVGYAFQSWMGEGFPIHRGDVFHTINRLRKLRLNKRALEVMEWVVRERPYRLKELDYSYL 130
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
L+ K G+ E +P F+ E++Y L+ +C+ ++ + + +M+++G P+
Sbjct: 131 LEFTTKHHGISHGEKLFLHVPSEFQNELLYNNLVISCLEKGVIRLSLDYMKKMREQGHPI 190
Query: 127 TSFACNQLLILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N+L+IL+ +K + +L M + V +Y IL+ I+ +++ G+ +V
Sbjct: 191 SYLIFNRLIILHSSPGSRKMIPKILAQMRADKVVPHVSTYNILMKIEANEHNIDGLVKVF 250
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME----GDNLKEHRW-TCRLLLP 240
MK +EP+ + ILA + + AEA ++ +E GDN W T +L+
Sbjct: 251 NDMKRFKVEPNEVSFCILATAHAAARLYTVAEAYVEAVEKSCSGDN-----WSTLDVLII 305
Query: 241 LYAELGKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LY LGK ++ R W + P + M AIEA+GK+ ++ AE ++ M S
Sbjct: 306 LYGHLGKEKELERTWGIVLELPHVRSKSYMLAIEAYGKIGQLSRAEELWLEMKSIHGLRS 365
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T+ + ++L VY H ++ K ++M +GC + + L ++ VE+A L
Sbjct: 366 TEQFNSMLSVYCKHGLIKKATGNFREMEINGCKANSITFRHLALGCLKANLVEEALKTLE 425
Query: 359 KAQQ---QNKFK---PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+ N+ K P + + I++ +A++GD+ + EK+F + + Y+ F L+
Sbjct: 426 MGKNLTTSNRVKNSTPWLETTLSIIELFAEKGDVVNVEKLFEELAKAKYIRHTFVFNILI 485
Query: 413 QAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFR 451
+AY+ AK + + RM P+ + + + FR
Sbjct: 486 KAYVKAKIYSPNLLRRMILGGARPDAETYSLIKLAEQFR 524
>gi|356557435|ref|XP_003547021.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 212/445 (47%), Gaps = 19/445 (4%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ S + +G + +I A+ LR M +ALQ+ EW+ + E DY+
Sbjct: 53 SVGSAFRSWMRDGLPVHGGDIFHAINRLRKLNMNKRALQVMEWVIRERPYRPRELDYSYL 112
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
++ KL G+ E +IP F+ E++Y L+ C+ +K + E +M++ GFP+
Sbjct: 113 VEFTTKLHGISHGEKLFSRIPVEFQSELLYNNLVIACLDKGVIKLSLEYMKKMRELGFPI 172
Query: 127 TSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N+L+IL+ ++K+ LL M+ + V +Y IL+ I+ ++L + +V
Sbjct: 173 SHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVKVF 232
Query: 186 EAMKSEGIEPDSSTQAILA-KHYVS---GGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
MK +EP+ + ILA H V+ + EA+ K + G+N W T +LL
Sbjct: 233 GRMKVAQVEPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNN-----WSTLDVLLM 287
Query: 241 LYAELGKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LY LG ++ R+W + P + M AIEA+G++ ++ AE ++ M T S
Sbjct: 288 LYGYLGNQKELERVWATIQELPSIRSKSYMLAIEAFGRIGQLNRAEEIWLEMKSTKGLKS 347
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL- 357
+ + +++ VY H + + L K M SGC + + L ++ G E+A L
Sbjct: 348 VEQFNSMMSVYCKHGFIDRAAKLYKNMKASGCKPNAITYHQLALGCLKSGMAEQALKTLD 407
Query: 358 --LKAQQQNKFK---PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L+ + + P + + I++ +A++GD+ + E++F + Y + TL+
Sbjct: 408 LGLRLTISKRVRNSTPWLETTLSIVEIFAEKGDVGNVERLFEEFHKAKYCRYTFVYNTLI 467
Query: 413 QAYINAKTPAYGIRDRMRADNVFPN 437
+AY+ AK + RM P+
Sbjct: 468 KAYVKAKIYNPNLLKRMILGGARPD 492
>gi|413917311|gb|AFW57243.1| hypothetical protein ZEAMMB73_018964 [Zea mays]
Length = 514
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 221/429 (51%), Gaps = 21/429 (4%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ + + + +G + R + A+ LR R++ ALQ+ EW+ + E DY+
Sbjct: 60 SVGAAMRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYL 119
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
L+ AK+ G+ +AES ++P+ R E++Y L+ + N++K + +M++ P+
Sbjct: 120 LEFTAKVHGISEAESLFLRVPQECRKELLYNNLVMAALDLNHIKHSYAYMRKMRELSLPI 179
Query: 127 TSFACNQLLILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ + N+L+IL+ ++K ++ +L M+ + V +Y IL+ I+ +++ G+ +V
Sbjct: 180 SPYVYNRLIILHSSPGRRKTISKILSQMKADRVVPHTSTYNILLKIQANEHNIDGLARVF 239
Query: 186 EAMKSEGIEPDSSTQAILA-KHYVS---GGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
MK IEP+ T ILA H V+ EA+ M G N W T +LL
Sbjct: 240 NGMKRAKIEPNEITYGILAIAHAVARLYTVCHTYVEAIENSMTGTN-----WSTLEILLI 294
Query: 241 LYAELGKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LY LGK ++ R W++ + P + AIEA+GK+ +++AE ++ + T KKLS
Sbjct: 295 LYGYLGKEKELKRTWEIMQDLPHIRSKSFTLAIEAFGKVGSIDQAEKIWIHIKST-KKLS 353
Query: 299 -TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
T+ + ++L VY H ++ K + K+M +GC + + L ++ G V++A + +
Sbjct: 354 LTEQFNSMLSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTI 413
Query: 358 LKAQQQNKFK------PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+++ K P + L+++ +A+ GD+ + ++++ + + Y + TL
Sbjct: 414 DMGKKEVVTKKVRSSTPWLETTHLLLENFAEIGDLENAKRLYSELNESKYSLNSFVYNTL 473
Query: 412 VQAYINAKT 420
++AY+ AK
Sbjct: 474 LKAYVKAKV 482
>gi|225434953|ref|XP_002281058.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial [Vitis vinifera]
Length = 550
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 210/430 (48%), Gaps = 11/430 (2%)
Query: 18 EGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQ 77
EG + R I A+ LR + +AL++ EW+ + E DY+ L+ KL G+
Sbjct: 107 EGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYSYLLEFTTKLHGIS 166
Query: 78 KAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLIL 137
+ E +P F+ E++Y L+ C+ ++ + +M++ G P++ N+L+IL
Sbjct: 167 QGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLVFNRLIIL 226
Query: 138 YKRLDKKKVAD-VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD 196
+ ++K+ +L M+ + V +Y IL+ I+ +++ G+ +V MK + +EP+
Sbjct: 227 HSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMKQQQVEPN 286
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLPLYAELGKADQVARIW 255
+ +LA + AEA ++ +E ++ + W T +L+ LY LGK + R W
Sbjct: 287 EVSYCLLATAHAVAKLYTVAEAYVEAVE-KSITGNNWSTLDVLIILYGYLGKPTDLERTW 345
Query: 256 KLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
+ + P + M AIEA+G++ ++ AE ++ + + ST+ + +++ VY+ H
Sbjct: 346 GIVQELPHVRSKSYMLAIEAFGRIGQLNRAEELWLEIKSKKELKSTEQFNSMISVYSKHG 405
Query: 314 MLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI------LLKAQQQNKFK 367
+ K L ++M +GC + + L ++ G +E+A L + + K
Sbjct: 406 FIDKASGLFREMEMNGCKANAITYRNLALGCLKAGLLEEALKTLELGKGLTISTRIRKSI 465
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRD 427
P + + I++ +++ GD+ + EK+F ++ Y + TL++AY+ AK +
Sbjct: 466 PWLETTLSIVEIFSENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYVKAKVYDPNLLR 525
Query: 428 RMRADNVFPN 437
RM P+
Sbjct: 526 RMILGGARPD 535
>gi|359483464|ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 211/442 (47%), Gaps = 14/442 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P+ S+ L + + GN + AE+ + +LR R+ + +AL++SEW+ F ++
Sbjct: 51 PNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEH 110
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI ++RG AESY + + + Y LL V K+ +MK+ G
Sbjct: 111 AVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMG 170
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F + N ++ LY + + +KV DVL M++ NV FSY+I I+ G +D+ GM+
Sbjct: 171 FASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGME 230
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
V++ M+ + I D +T A+ A Y+ G +KA LK+ E K L+ L
Sbjct: 231 NVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISL 290
Query: 242 YAELGKADQVARIWKL----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
YA LG +V R+W L C+ N D + +E+ +L ++EEAE V + +
Sbjct: 291 YASLGNKAEVLRLWSLEKSACKRNINRDY-ITMLESLVRLGELEEAEKVLREWESSGNCY 349
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA---- 353
+ ++ Y++ + K + ++K++ E G P +W + +++ GE+EKA
Sbjct: 350 DFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPNSWGTVASGYMDEGEMEKAVECM 409
Query: 354 -DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+I L + + KP I+ +G + E +R V + R + + TL+
Sbjct: 410 KAAISLHVNNKGR-KPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNR-RMYHTLI 467
Query: 413 QAYINAKTPAYGIRDRMRADNV 434
A I A G+ M+AD +
Sbjct: 468 MANIRAGKEVDGLLASMKADKI 489
>gi|242078281|ref|XP_002443909.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
gi|241940259|gb|EES13404.1| hypothetical protein SORBIDRAFT_07g004200 [Sorghum bicolor]
Length = 521
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 222/428 (51%), Gaps = 21/428 (4%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ + + + +G + R + A+ LR R++ ALQ+ EW+ + E DY+
Sbjct: 67 SVGAAMRGWMADGRAVHRGHVFHAINRLRRHRLHRTALQVMEWIVRERPYKLSELDYSYL 126
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
L+ AK+ G+ +AES ++P+ ++ E++Y L+ + + +K + +M++ P+
Sbjct: 127 LEFTAKVHGISEAESLFLRVPQEYQKELLYNNLVMAALDLDLIKHSYAYMRKMRELSLPI 186
Query: 127 TSFACNQLLILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ + N+L+IL+ ++K ++ +L M+ + V +Y IL+ I+ +++ G+ +V
Sbjct: 187 SPYVYNRLIILHSSPSRRKTISKILYQMKADRVTPHTSTYNILLKIQANEHNIDGLARVF 246
Query: 186 EAMKSEGIEPDSSTQAILA-KHYVS---GGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
MK IEP+ T ILA H V+ EA+ M G N W T +LL
Sbjct: 247 SDMKRAKIEPNEITYGILAISHAVARLYTVCHTYVEAIENSMTGTN-----WSTLEILLI 301
Query: 241 LYAELGKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LY LGK ++ R W++ + P + AIEA+GK+ +++AE ++ ++ T KKLS
Sbjct: 302 LYGYLGKEKELKRTWEIMQDLPHVRSKSFTVAIEAFGKVGSIDQAEKIWVQIKST-KKLS 360
Query: 299 -TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
T+ + ++L VY H ++ K + K+M +GC + + L ++ G V++A + +
Sbjct: 361 LTEQFNSILSVYCRHGVVDKASSVFKEMRANGCQPNAITYRHLALGCLKSGLVKEALNTI 420
Query: 358 LKAQQQNKFK------PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+++ K P + L+++ +A+ GD+ + ++++ + + Y + TL
Sbjct: 421 DMGKKEVVTKKVRSSTPWLETTHLLLENFAEIGDLENAKRLYSELNESKYSRNSFVYNTL 480
Query: 412 VQAYINAK 419
++AY+ AK
Sbjct: 481 LKAYVKAK 488
>gi|297837423|ref|XP_002886593.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332434|gb|EFH62852.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 222/458 (48%), Gaps = 16/458 (3%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
++ + L ++ + + + E+ + LR R +Y AL+LSE +E + ++ D
Sbjct: 34 GTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVME-ERGMNKTVSD 92
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKD 121
A LDL+AK RG+ E+Y +PE+ + E+ Y +LL NC + +KAE + N+MK+
Sbjct: 93 QAIHLDLVAKARGITAGENYFVDLPETSKTELTYGSLL-NCYCKELLTEKAEGLLNKMKE 151
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
+S + N L+ LY + + +KV ++ ++ ENV ++Y + + +ND++G
Sbjct: 152 LNITPSSMSYNSLMTLYTKTGQTEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISG 211
Query: 181 MDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+++V+E M +G + PD +T + +A YV G +KAE L+E+E N + + L+
Sbjct: 212 VERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLI 271
Query: 240 PLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LY LGK +V RIW +L + I+ KLN + AE +FK
Sbjct: 272 TLYGRLGKLTEVYRIWRSLRLAMPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCST 331
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ L+ YA ++ K K+L ++ G W+ + +V+ G++ A
Sbjct: 332 YDIRIVNVLIGAYAKEGLIEKAKELKEKAPRRGGKANAKTWEIFMDYYVKSGDMAHALEC 391
Query: 357 LLKA-----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+ KA K+ P + +M + ++ D++ E + ++ + F++L
Sbjct: 392 MSKAVSIGKGDGGKWIPSQETVRTLMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFESL 451
Query: 412 VQAYINAKTPAYGIRDRMRADNVFPN---KALAAQVAQ 446
++ Y A +R R++ +NV N K L +V+Q
Sbjct: 452 IRTYAAAGKSHPAMRRRLKMENVEVNEVTKKLLDEVSQ 489
>gi|302788498|ref|XP_002976018.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
gi|300156294|gb|EFJ22923.1| hypothetical protein SELMODRAFT_415910 [Selaginella moellendorffii]
Length = 603
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 226/445 (50%), Gaps = 27/445 (6%)
Query: 5 DISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL--ETNKKLDF-IER 61
D S+ S L K+ EEG DL+ + I + L+ AL++ EW+ E + K DF + R
Sbjct: 162 DESMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWVVDEPDYK-DFKLAR 220
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
+ L++ A+ +G+ AE +++ + VY LL V +NVKKAE +F M
Sbjct: 221 SFQ--LEITARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDK 278
Query: 122 KGFPVTS-FACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
GF S FA N ++ LYK + D K ++L + V+ F+Y +++D+K ++ D+
Sbjct: 279 AGFLSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVE 338
Query: 180 GMDQVVEAMK-SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
GM+++ E MK + +PD ++ L K Y+ G +KAE L ME + + T +
Sbjct: 339 GMEKIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEYM 398
Query: 239 LPLYAELGKADQVARIWKLCESNP--WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ Y +LG V R+W+ C+ P + +A A +V+ +++FK M K WK+
Sbjct: 399 MLAYGQLGLISDVERMWQKCKMVPGDGFNSFLAFQRAMALAGEVQRVDSMFKHMDK-WKR 457
Query: 297 LST---KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
T K + LL Y M + K+L K+M E + + W+ E ++ KA
Sbjct: 458 SKTVDLKRHNNLLLAYYKKGMKCEIKELEKKMNEMDLRVTLVDWEK------EPIKMSKA 511
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+++ ++K K M + L ++ ++ D+ + E F + + G +A+ + L++
Sbjct: 512 AKAVVR---KDKEKEMAARKGL--EEAVEKADVKAAESAFEKCK-AGNMAKVGVWNKLLK 565
Query: 414 AYINAKTPAYGIRDRMRADNVFPNK 438
AY+NA+ PAYG RM+A+ V N+
Sbjct: 566 AYVNAQVPAYGFLQRMKAEGVEANE 590
>gi|255584236|ref|XP_002532856.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527393|gb|EEF29534.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 218/446 (48%), Gaps = 11/446 (2%)
Query: 15 YAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLR 74
+ EG + R ++ A+ LR ++ +AL++ EW+ + E DY+ L+ KL
Sbjct: 75 WMREGFPIHRGDVFHAINRLRKLKLNKRALEVMEWVIRERPYRPKELDYSYLLEFTTKLH 134
Query: 75 GLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL 134
G+ E +IP F+ E++Y L+ C+ ++ + E +M++ G P++ N+L
Sbjct: 135 GISHGEKLFTRIPTEFQNELLYNNLVIACLEKGVIRLSLEYMKKMRELGHPISHLIFNRL 194
Query: 135 LILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
+IL+ ++K + +L M+ + V +Y IL+ I+ +++ G+ +V MK +
Sbjct: 195 IILHSSPGRRKMIPKILTQMKADKVVRHVSTYNILMKIEANEHNVEGLIKVFGEMKRLEV 254
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR 253
EP+ + ILA + AEA ++ +E ++ T +L+ LY L K ++ R
Sbjct: 255 EPNEVSFCILAIAHAVARLYTVAEAYVEAVEKSYTGDNWSTLDVLIILYGYLRKGKKLDR 314
Query: 254 IWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL-STKHYTALLKVYA 310
IW + P + + AIEA+G++ ++ AE ++ M K+ K L ST+ + ++L +Y
Sbjct: 315 IWGTVKELPHVRSKSYILAIEAFGRIGQLGRAEELWLEM-KSLKGLKSTEQFNSMLSIYC 373
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL---LKAQQQNKFK 367
++ K D+ ++M +GC + + L ++ VE+A L + NK K
Sbjct: 374 KCGLVKKATDIFREMDRNGCKPNAITFRHLALGCLKAELVEEALKTLEMGMDFTTSNKIK 433
Query: 368 ---PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG 424
P + I++ +A++GD+ + EK F + + Y + TL++AY+ AK
Sbjct: 434 NSIPWLETTFSIVEIFAEKGDVANAEKFFEELHKAKYARYTFVYNTLIKAYVKAKVYVPY 493
Query: 425 IRDRMRADNVFPNKALAAQVAQVDAF 450
+ RM P+ + + ++ F
Sbjct: 494 LLRRMILGGARPDAETYSLIKLIEQF 519
>gi|357139769|ref|XP_003571450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Brachypodium distachyon]
Length = 517
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 209/416 (50%), Gaps = 19/416 (4%)
Query: 19 GNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQK 78
G + R + A+ LR RR++ LQ+ EW+ + E DY+ L+ AK+ G+ +
Sbjct: 75 GRAVHRGHVFHAINRLRRRRLHRTGLQVMEWVIRERPYKLSELDYSYLLEFTAKVHGISE 134
Query: 79 AESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY 138
AES +IP+ +R E++Y L+ C+ + +K + +M++ P++ + N+L+IL+
Sbjct: 135 AESLFLRIPQEYRNELLYNNLVMACLELSLIKLSYGYMRKMRELSLPISPYVYNRLIILH 194
Query: 139 KRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
++K + +L M+ V +Y IL+ I+ +++ G+ +V MK +EP+
Sbjct: 195 SSEGRRKTIPKILAQMKASKVTPHTSTYNILLKIQANEHNIDGVARVFNDMKRAKVEPNE 254
Query: 198 STQAILA-KHYVS---GGRKEKAEAMLKEMEGDNLKEHRWTCR-LLLPLYAELGKADQVA 252
T ILA H V+ + EA+ M G N W+ + +LL LY LGK ++
Sbjct: 255 ITYGILAISHAVARLYTVSQTYIEAIKNSMTGTN-----WSTQEILLILYGYLGKEKELK 309
Query: 253 RIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
WKL + P + AIEA+GK+ +E+AE ++ + K T+ + ++L VY
Sbjct: 310 MTWKLMQVLPHIRSKSFTLAIEAFGKIGSIEQAEEIWGEIKSARKLRLTEQFNSMLSVYC 369
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL------LKAQQQN 364
H ++ K + K+M SGC + + L ++ G V++A + + + ++
Sbjct: 370 RHGVVDKASAVFKEMRASGCQPNAITYRHLALGCLKAGLVKQALNTMDMGKKEVVTRKVR 429
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
P + ++++ +A+ GD+ + + ++ + + Y + TL++AY+ AK
Sbjct: 430 NSTPWLETTHMLLENFAEIGDLENAKIVYAELNESKYCRNSFVYNTLLKAYVKAKV 485
>gi|15219808|ref|NP_176276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097554|sp|O22714.1|PPR86_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g60770
gi|2462744|gb|AAB71963.1| Hypothetical protein [Arabidopsis thaliana]
gi|27754491|gb|AAO22693.1| unknown protein [Arabidopsis thaliana]
gi|28393975|gb|AAO42395.1| unknown protein [Arabidopsis thaliana]
gi|332195609|gb|AEE33730.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 217/446 (48%), Gaps = 13/446 (2%)
Query: 5 DISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYA 64
++ + L ++ + + + E+ + LR R +Y AL+LSE +E + ++ D A
Sbjct: 36 EVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVME-ERGMNKTVSDQA 94
Query: 65 SCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDKG 123
LDL+AK R + E+Y +PE+ + E+ Y +LL NC + +KAE + N+MK+
Sbjct: 95 IHLDLVAKAREITAGENYFVDLPETSKTELTYGSLL-NCYCKELLTEKAEGLLNKMKELN 153
Query: 124 FPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+S + N L+ LY + + +KV ++ ++ ENV ++Y + + +ND++G++
Sbjct: 154 ITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVE 213
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+V+E M +G + PD +T + +A YV G +KAE L+E+E N + + L+ L
Sbjct: 214 RVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITL 273
Query: 242 YAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
Y LGK +V RIW +L + I+ KLN + AE +FK
Sbjct: 274 YGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYD 333
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
+ L+ YA ++ K +L ++ G + W+ + +V+ G++ +A +
Sbjct: 334 IRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMS 393
Query: 359 KA-----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
KA K+ P + +M + ++ D++ E + ++ + F+ L++
Sbjct: 394 KAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIR 453
Query: 414 AYINAKTPAYGIRDRMRADNVFPNKA 439
Y A +R R++ +NV N+A
Sbjct: 454 TYAAAGKSHPAMRRRLKMENVEVNEA 479
>gi|147807263|emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 211/442 (47%), Gaps = 14/442 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P+ S+ L + + GN + AE+ + +LR R+ + +AL++SEW+ F ++
Sbjct: 51 PNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEH 110
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI ++RG AESY + + + Y LL V K+ +MK+ G
Sbjct: 111 AVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMG 170
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F + N ++ LY + + +KV DVL M++ +V FSY+I I+ +D+ GM+
Sbjct: 171 FASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSYAAQSDIQGME 230
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+V++ M+ + I D +T A+ A Y+ G +KA LK+ E K L+ L
Sbjct: 231 KVLKEMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISL 290
Query: 242 YAELGKADQVARIWKL----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
YA LG +V R+W L C+ N D + +E+ +L ++EEAE V + +
Sbjct: 291 YASLGNKAEVLRLWSLEKSACKRNINRDY-ITMLESLVRLGELEEAEKVLREWESSGNCY 349
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA---- 353
+ ++ Y++ + K + ++K++ E G P +W + +++ GE+EKA
Sbjct: 350 DFRVPNIVIIGYSEKGLFEKAEAMLKELMEKGKITTPDSWGTVASGYMDEGEMEKAVECM 409
Query: 354 -DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+I L + + KP I+ +G + E +R V + R + + TL+
Sbjct: 410 KAAISLHVNNKGR-KPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNR-RMYHTLI 467
Query: 413 QAYINAKTPAYGIRDRMRADNV 434
A I A G+ M+AD +
Sbjct: 468 MANIRAGKEVDGLLASMKADKI 489
>gi|449462348|ref|XP_004148903.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
gi|449491586|ref|XP_004158945.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Cucumis sativus]
Length = 531
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 214/444 (48%), Gaps = 17/444 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + + K+ EEG + + E+ + LR + Y AL++ EW+ K + + DY
Sbjct: 60 PKRSAVTAIRKWQEEGRTVRKYELNRNVRELRKLKRYKHALEVCEWMTLQKDMRLVPGDY 119
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI K+RGL +AE + + +P+ R + V +LL V N +KAE + +M + G
Sbjct: 120 AVHLDLICKIRGLNRAEKFFEDLPDKIREQSVCTSLLHAYVQNNLSEKAEALMEKMSECG 179
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLLLME--KENVKLTQFSYKILIDIKGQSNDLTGM 181
F + + N +L L+ + K++ V L+E K+N K +Y +L+++ ND
Sbjct: 180 FLKSPLSFNHMLSLH--ISNKQLEKVPALIEGLKKNTKPDVVTYNLLLNVCTLQNDTEAA 237
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+ + MK I+PD + + LA Y EKA A LKEME K +R + LL L
Sbjct: 238 ENIFLEMKKTKIQPDWVSFSTLANLYCKNQLTEKAAATLKEMEKMAFKSNRLSLSSLLSL 297
Query: 242 YAELGKADQVARIWKLCESN--PWLD---VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
Y LG ++V RIWK +S+ D +CM I + KLN++EEAE ++
Sbjct: 298 YTNLGDKNEVYRIWKKLKSSFRKMSDREYMCM--ISSLVKLNELEEAEKLYTEWESVSGT 355
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
T+ +L Y + + + +M + G W+ L +++ ++EK
Sbjct: 356 RDTRVSNVMLGAYIKKNQIEQAESFYNRMLQKGTVPSYTTWELLTWGYLKENQMEKVLHF 415
Query: 357 LLKAQQQNKFKPMFSSYML---IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
KA N+ K + L + + ++G+I+ E++ +R G+V + + +L++
Sbjct: 416 FRKA--VNRVKKWNADERLVKGVCKKLEEQGNINGVEQLLLILRNAGHVDT-EIYNSLLR 472
Query: 414 AYINAKTPAYGIRDRMRADNVFPN 437
Y A + +RM DNV N
Sbjct: 473 TYAKAGKMPLIVAERMERDNVQLN 496
>gi|125602283|gb|EAZ41608.1| hypothetical protein OsJ_26140 [Oryza sativa Japonica Group]
Length = 524
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 217/428 (50%), Gaps = 19/428 (4%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ + + + +G + R + A+ LR RR++ ALQ+ EW+ + E DY+
Sbjct: 63 SVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYL 122
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
L+ AK+ G+ +AES +IP+ ++ E++Y L+ C+ +K A +M++ P+
Sbjct: 123 LEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPI 182
Query: 127 TSFACNQLLILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ + N+L+IL+ ++K ++ +L M+ + V +Y IL+ IK +++ G+ +V
Sbjct: 183 SPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVF 242
Query: 186 EAMKSEGIEPDSSTQAILA-KHYVS---GGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
MK +EP+ T ILA H V+ EA+ M G N W T +LL
Sbjct: 243 NDMKRAKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTN-----WSTLEILLI 297
Query: 241 LYAELGKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LY GKA ++ W L + P + + AIEA+GK+ +++AE ++ + T K
Sbjct: 298 LYGYHGKAKELKMTWDLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKL 357
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T+ + ++L VY H ++ K + K+M +GC + + L ++ G V++A +
Sbjct: 358 TEQFNSILSVYCRHGLVDKASAVFKEMRANGCQPNAITYRHLTLGCLKAGIVKEALKTMD 417
Query: 359 KAQQQNKF------KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
A+++ P + +I++ +A+ GD+ + +++F + + Y + TL+
Sbjct: 418 IAKKEVVTKKVKSSTPWLETTHMILESFAENGDLVNAKRVFDELNESKYCRNSFVYNTLL 477
Query: 413 QAYINAKT 420
+A++ AK
Sbjct: 478 KAHVKAKV 485
>gi|255573349|ref|XP_002527601.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533018|gb|EEF34782.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 502
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 210/440 (47%), Gaps = 11/440 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
PDIS+ L + +EG + E+ + +LR R Y +ALQ+SEW+ + F D+
Sbjct: 47 PDISLVPVLDNWVQEGKKIRGFELQKIIRDLRCHRRYTQALQVSEWMNGKGQSGFSPADH 106
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI ++RGL+ AESY Q + R + Y LL V V K+ +MK+ G
Sbjct: 107 AVQLDLIGRVRGLESAESYFQNLVNQDRNDKTYGALLNCYVREGLVDKSLYHMQKMKELG 166
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F + N L+ LY R + +KV DVL M++ + FSY+I + +DL G++
Sbjct: 167 FASSPLNYNDLMCLYTRTGQLEKVTDVLSEMKENGITPDLFSYRICMSSCAARSDLKGVE 226
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+++E M+++ I D T + +A YV KEKA LK+ E + L+ L
Sbjct: 227 EILEEMENQSHISIDWVTYSTVASIYVKASLKEKALIYLKKCE-QKVNRDALGYNHLISL 285
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWG---KLNKVEEAEAVFKRMSKTWKKLS 298
A LG D+V R+W L ++ V I G KL ++EEA+ + + + +
Sbjct: 286 NASLGIKDEVMRLWGLVKTKCKKQVNRDYITMLGALVKLEELEEADKLLQEWESSCQCYD 345
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL- 357
+ LL Y ++ K + ++K + + + P +W + +V +EKA + +
Sbjct: 346 FRVPNVLLIGYCQQGLIEKAEAMLKDIVKKQKNPTPNSWAIIAAGYVNKQNMEKAFNCMK 405
Query: 358 --LKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L Q +NK ++P + I+ + GD+ E F + + + + TL++A
Sbjct: 406 EALTVQAENKGWRPKANLISSILSWLGENGDVEDVEA-FVNLLETKVPKDREIYHTLIKA 464
Query: 415 YINAKTPAYGIRDRMRADNV 434
YI G+ + M A+ +
Sbjct: 465 YIRGGKQVDGVLENMTANKI 484
>gi|449450908|ref|XP_004143204.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
gi|449517541|ref|XP_004165804.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Cucumis sativus]
Length = 527
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 214/445 (48%), Gaps = 12/445 (2%)
Query: 18 EGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQ 77
+G + R +I A+ LR +AL++ EW+ K E DY+ L+ K G+
Sbjct: 83 DGFPIHRGDIFHAINRLRKLERNKRALEVMEWVIREKPYRINELDYSYLLEFTIKHHGIS 142
Query: 78 KAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLIL 137
+ E IP F+GE+++ L+ C+ ++ + +M++ G ++ N+L+IL
Sbjct: 143 QGEKLFSNIPVEFQGELLFNNLVIACLDKGAIRLSLAYMRKMREVGHSISHLVFNRLIIL 202
Query: 138 YKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD 196
+ ++K + +L M+ + V L +Y IL+ I+ +++ G+ +V M+ +EP+
Sbjct: 203 HSSFRRRKIIPKILSQMKADKVPLHVSTYNILMKIEANEHNIEGLMRVFSDMRRAKVEPN 262
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLPLYAELGKADQVARIW 255
+ I+A + EA ++ +E ++ + W T +L+ LY L K ++ R W
Sbjct: 263 EVSYCIVATAHAVAKLYTVVEAYVEALE-KSIAGNNWSTYDVLIILYGYLNKEKELERTW 321
Query: 256 KLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
+ + P + + AIEA+G++ + AE ++ M +T + ++L VY H
Sbjct: 322 GIIQGFPHIPSKSFILAIEAFGRIGLLSRAEELWLEMKTKRGIKATDQFNSILSVYCRHG 381
Query: 314 MLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL-LKAQQQNKFK----- 367
++ K ++ +++ +GC + + L ++ G VE+A L L + + K
Sbjct: 382 LIKKATEIFRKIEANGCKPNAITFRHLAFGCLKAGLVEEALKTLDLGSNTTSSTKIVRKS 441
Query: 368 -PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
P + + +++ A+RGDI +TEK+F +++ Y + TL++AY+ AK +
Sbjct: 442 TPWLETTLSMIEILAERGDIENTEKLFKELKEAKYTRYTFVYNTLIKAYVKAKIHNPNLL 501
Query: 427 DRMRADNVFPNKALAAQVAQVDAFR 451
RM P+ + + + F+
Sbjct: 502 RRMIVGGARPDSETYSLIKLSEQFQ 526
>gi|225446335|ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial [Vitis vinifera]
Length = 499
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 214/425 (50%), Gaps = 12/425 (2%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+SI L ++ +EG + + ++ + LRT + Y AL++ EW+ D D A
Sbjct: 49 VSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAI 108
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVA-GNNVKKAEEVFNRMKDKGF 124
LDLI+K+ GL++AE Y + P S R VY LL NC + +++KAE + M+D GF
Sbjct: 109 QLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALL-NCYSQKKSLEKAEAIMQEMRDMGF 167
Query: 125 PVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
V + + N +L LY RL K +K+ +++ ME+ + L F+Y I ++ ++D+ GM++
Sbjct: 168 -VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEK 226
Query: 184 VVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLLPL 241
++ ++++ + D + + A Y+ KEKA MLK+ E + + R+ +LL L
Sbjct: 227 LLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTL 286
Query: 242 YAELGKADQVARIWKLCES-NPWLDVC-MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
YA +G +V RIW L ++ + + +A + + KL+ ++ AE F+ K
Sbjct: 287 YATMGNKTEVYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDF 346
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ L++ Y +L K + LV + E G + WDAL + E ++EKA L K
Sbjct: 347 RVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKK 406
Query: 360 A--QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
A +KP + ++ +GD+ E + +R+ V+ + LV YI
Sbjct: 407 ALLATSQGWKPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLVSAYDS-DRLVN-YIR 464
Query: 418 AKTPA 422
++ P
Sbjct: 465 SEEPG 469
>gi|356547249|ref|XP_003542028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07590,
mitochondrial-like [Glycine max]
Length = 507
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 213/459 (46%), Gaps = 19/459 (4%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ + + +G + ++ A+ LR M +ALQ+ EW+ + E DY+
Sbjct: 53 SVGAAFCSWMRDGLPVHGVDVFHAVNRLRKLNMNKRALQVMEWVIRERPYRPKELDYSYL 112
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
++ KL G+ E +IP F+ E++Y L+ C+ +K + E +M++ GF +
Sbjct: 113 VEFTTKLHGISHGEKLFSRIPVEFQNELLYNNLVIACLDKGVIKLSLEYMKKMRELGFLI 172
Query: 127 TSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N+L+IL+ ++K+ LL M+ + V +Y IL+ I+ ++L + +
Sbjct: 173 SHLVFNRLIILHSSPGRRKMIPKLLTQMKADKVTPHVSTYNILMKIEANEHNLENLVKFF 232
Query: 186 EAMKSEGIEPDSSTQAILA-KHYVS---GGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
MK + P+ + ILA H V+ + EA+ K + G+N W T +LL
Sbjct: 233 SRMKVAQVAPNEISYCILAIAHAVARLYTATEAYVEAVEKSITGNN-----WSTLDVLLM 287
Query: 241 LYAELGKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LY LG ++ R+W P + M AIEA+G++ ++ +AE ++ M T S
Sbjct: 288 LYGYLGNQKELERVWATIRELPSVRSKSYMLAIEAFGRIGQLNQAEELWLEMESTKGLKS 347
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL- 357
+ + +++ VY H + K L K M SGC + + L ++ G E+ L
Sbjct: 348 VEQFNSMMSVYCKHGFIGKAAKLYKNMKASGCKPNAITYRQLALGCLKSGMAEQGLKTLD 407
Query: 358 --LKAQQQNKFK---PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L+ + + P + + I++ +A++GD+ + E++F + Y + TL+
Sbjct: 408 LGLRLTISKRVRNSIPWLETTLSIVEIFAEKGDMGNVERLFEEFHKSKYCRYTFVYNTLI 467
Query: 413 QAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFR 451
+AY+ AK + RM P+ + + + FR
Sbjct: 468 KAYVKAKIYDPNLLKRMILGGARPDAETYSLLKIAEQFR 506
>gi|302764000|ref|XP_002965421.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
gi|300166235|gb|EFJ32841.1| hypothetical protein SELMODRAFT_406783 [Selaginella moellendorffii]
Length = 584
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 214/442 (48%), Gaps = 40/442 (9%)
Query: 5 DISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYA 64
D S+ S L K+ EEG DL+ + I + L+ AL++ EW+
Sbjct: 162 DESMSSVLDKWKEEGKDLTVSMIVTVINRLKNSNRMAHALEMIEWI-------------- 207
Query: 65 SCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF 124
A+ +G+ AE +++ + VY LL V +NVKKAE +F M GF
Sbjct: 208 -----TARSKGIAAAEKLFEELSAEEKTRPVYNALLTRYVFLHNVKKAEGLFEEMDKAGF 262
Query: 125 PVTS-FACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
S FA N ++ LYK + D K ++L + V+ F+Y +++D+K ++ D+ GM+
Sbjct: 263 LSQSPFALNLMMKLYKHKGDNAKFQEMLEKAKDVAVEPNIFTYNVMLDLKAKAGDVEGME 322
Query: 183 QVVEAMK-SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
++ E MK + +PD ++ L K Y+ G +KAE L ME + + T ++
Sbjct: 323 KIFEEMKLNPNAKPDGTSYFTLCKGYLKAGLTDKAEVSLLRMEVGPFRRTKATFEYMMLA 382
Query: 242 YAELGKADQVARIWKLCESNP--WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
Y +LG V R+W+ C+ P + +A A +V+ +++FK M K WK+ T
Sbjct: 383 YGQLGLISDVERMWQKCKMVPGDGFNSFLAFQRAMALAGEVQRVDSMFKHMDK-WKRSKT 441
Query: 300 ---KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
K + LL Y M + K+L K+M E + + W+ E ++ KA
Sbjct: 442 VDLKRHNNLLLAYYKKGMKCEIKELEKKMNEMDLRVTLVDWEK------EPIKMSKAAKA 495
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+++ ++ + ++ +++ ++ D+ + E F + + G +A+ + L++AY+
Sbjct: 496 VVRKDKEKE-----TAARKGLEEAVEKADVKAAESAFEKCK-AGNMAKVGVWNKLLKAYV 549
Query: 417 NAKTPAYGIRDRMRADNVFPNK 438
NA+ PAYG RM+A+ V N+
Sbjct: 550 NAQVPAYGFLQRMKAEGVEANE 571
>gi|297848282|ref|XP_002892022.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337864|gb|EFH68281.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 523
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 203/425 (47%), Gaps = 18/425 (4%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLET-NKKLDFI 59
M+ P++ S L ++ + G L++ E+ + LR + +AL++ +W+ ++
Sbjct: 75 MEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNNRGERFRLS 134
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
D A LDLI K+RG+ AE + +PE+F+ VY +LL V + +KAE + + M
Sbjct: 135 ASDAAIQLDLIGKVRGISDAEQFFLTLPENFKDRRVYGSLLNAYVRAKSREKAEALLHTM 194
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
+DKG+ + N ++ LY L + D ++ M++++++L +SY I + G +
Sbjct: 195 RDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSV 254
Query: 179 TGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
M+ V + MKS+ I P+ +T + +A Y+ G EKAE L+++E +R
Sbjct: 255 EKMELVYQQMKSDVSINPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHY 314
Query: 238 LLPLYAELGKADQVARIWK----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL LY +G ++ R+W + S P L A + + ++ +E AE V++
Sbjct: 315 LLSLYGSVGNKKELYRVWNVYKSVVPSIPNLGY-HALVSSLARMGDIEGAEKVYEEWLPV 373
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ L+ VY + L K + L M E G W+ L H + +A
Sbjct: 374 KSSYDPRIPNLLMNVYVKNDQLEKAEGLFDHMVEMGGKPSSSTWEILADGHTRKRCIPEA 433
Query: 354 DSILLK---AQQQNKFKP---MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+ L K A+ + ++P M S + + ++ D+ S E + +RQ G++ K
Sbjct: 434 LTCLRKAFSAEGSSNWRPKVLMLSGFFKLCEE---ESDVTSKEAVLELLRQSGHLED-KA 489
Query: 408 FQTLV 412
+Q L+
Sbjct: 490 YQALI 494
>gi|218200516|gb|EEC82943.1| hypothetical protein OsI_27919 [Oryza sativa Indica Group]
Length = 500
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 224/453 (49%), Gaps = 25/453 (5%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ + + + +G + R + A+ LR RR++ ALQ+ EW+ + E DY+
Sbjct: 64 SVCAAIRGWMGDGRAVHRGHVFHAVNRLRRRRLHRAALQVMEWIMRERPYKLSELDYSYL 123
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
L+ AK+ G+ +AES +IP+ ++ E++Y L+ C+ +K A +M++ P+
Sbjct: 124 LEFTAKVHGISEAESLFLRIPQEYQNELLYNNLVMACLDLGLIKLAYGYKRKMRELSLPI 183
Query: 127 TSFACNQLLILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ + N+L+IL+ ++K ++ +L M+ + V +Y IL+ IK +++ G+ +V
Sbjct: 184 SPYVYNRLIILHSSPGRQKTISKILAQMKGDRVTPHTSTYNILLKIKANEHNIDGVARVF 243
Query: 186 EAMKSEGIEPDSSTQAILA-KHYVS---GGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
MK +EP+ T ILA H V+ EA+ M G N W T +LL
Sbjct: 244 NDMKRAKVEPNEITYGILAIAHAVARLYTVSHTYVEAIENSMTGTN-----WSTLEILLI 298
Query: 241 LYAELGKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LY GKA ++ W L + P + + AIEA+GK+ +++AE ++ + T K
Sbjct: 299 LYGYHGKAKELKMTWDLMQGLPHIRPKSFILAIEAFGKVGSIDQAEEIWGKFESTRKPKL 358
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T+ + ++L VY H ++ K + K+M +GC +VK ++ ++ K + +
Sbjct: 359 TEQFNSILSVYCRHGLVDKASAVFKEMRANGC---------IVKEALKTMDIAKKEVVTK 409
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
K + P + +I++ +A+ GD+ + +++F + + Y + TL++A++ A
Sbjct: 410 KVKSST---PWLETTHMILESFAENGDLVNAKRVFDELNESKYCRNSFVYNTLLKAHVKA 466
Query: 419 KTPAYGIRDRMRADNVFPNKALAAQVAQVDAFR 451
K + M P+ + + ++ F+
Sbjct: 467 KVYEPDLLRAMILRGAMPDAETYSLLGLIEQFK 499
>gi|225461407|ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 211/443 (47%), Gaps = 11/443 (2%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ P++S+ L ++ EEG + E+ + +LR+R+ Y +AL++SEW+ + + F
Sbjct: 46 LGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKELCPFSP 105
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
A LDLI ++RGL+ AE+Y + + + +Y LL V + K+ +MK
Sbjct: 106 SARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMK 165
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+ GF T N L+ LY D+ +K+ DVL M++ + FSY++ I+ G +DL
Sbjct: 166 ELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLN 225
Query: 180 GMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
M++++E M+S+ I D T +++A Y+ G EKA LK+ E L + L
Sbjct: 226 SMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAE-TKLHKDPLGYNHL 284
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG---KLNKVEEAEAVFKRMSKTWK 295
+ LYA LG ++ R+W+ ++ + I G KL ++E+ EA+ K +
Sbjct: 285 ISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGN 344
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ LL + ++ K + +++ + E G P +W + ++E +EKA
Sbjct: 345 CYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFE 404
Query: 356 ILLKA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+ +A + ++P I+ D+ E ++ V + R + +
Sbjct: 405 CMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDR-EMYHAQ 463
Query: 412 VQAYINAKTPAYGIRDRMRADNV 434
++A I A GI D M+AD +
Sbjct: 464 IRASIRAGKEVDGILDSMKADKI 486
>gi|255553771|ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542908|gb|EEF44444.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 192/405 (47%), Gaps = 23/405 (5%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P ISI L K+ EEGND+ + E+ + LR R + ALQ+SEW+ K + D
Sbjct: 51 PSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRFTHALQVSEWMTDKKGCSLLPGDV 110
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI+K+ GL KAE Y IP++ R VY LL C + KAE +MKD G
Sbjct: 111 AVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALLNCCAHSKLLGKAEATMQKMKDLG 170
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F S + N +L LY + + D L+ ME+ + + +Y I ++ S+D+ GM+
Sbjct: 171 FVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRLNACVNSSDIEGME 230
Query: 183 QVVEAMKSEGIEPDSSTQ----AILAKHYVSGGRKEKAEAMLKEME----GDNLKEHRWT 234
+++ M+ ++P+ S I A Y+ G +K MLK E G+ R+
Sbjct: 231 KLLMKME---VDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLISGNT---RRFA 284
Query: 235 CRLLLPLYAELGKADQVARIW-KLCESNPWLD---VCMAAIEAWGKLNKVEEAEAVFKRM 290
LL LY G +V RIW K E + + +CM I + KL+ ++ AE +F+
Sbjct: 285 YEFLLTLYTASGNKAEVYRIWNKYKEIGRFFNSGYICM--ISSLLKLDDIDGAERIFEEW 342
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
+ +++ VY+ L K + + ++ SG +W+ L + G++
Sbjct: 343 DSKKVLFDIRIPNSMVNVYSRKGHLEKAETYINKIVASGEEPDATSWNHLAAGYHSSGQM 402
Query: 351 EKADSILLKAQQQNK--FKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
KA + KA +K +KP + ++ +GD + E++
Sbjct: 403 TKAVETIRKAISVSKPGWKPSLLTLSACLEFLKGQGDAETLEELL 447
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 5/170 (2%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+AEA ++M ++ Y +L +Y+ K LV++M E+G + + +
Sbjct: 158 KAEATMQKMKDLGFVKNSLSYNVMLSLYSHMGNYEKLDPLVQEMEENGISCDRITYCIRL 217
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV-- 399
V ++E + +L+K + F +Y++ + Y K G + T + R Q+
Sbjct: 218 NACVNSSDIEGMEKLLMKMEVDPNISVGFHAYVIAANGYLKAGLVDKTLIMLKRSEQLIS 277
Query: 400 GYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNKALAAQVAQV 447
G RF ++ L+ Y + K Y I ++ + F N ++ +
Sbjct: 278 GNTRRF-AYEFLLTLYTASGNKAEVYRIWNKYKEIGRFFNSGYICMISSL 326
>gi|147775992|emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
Length = 499
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 212/425 (49%), Gaps = 12/425 (2%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+SI L ++ +EG + + ++ + LRT + Y AL++ EW+ D D A
Sbjct: 49 VSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAI 108
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVA-GNNVKKAEEVFNRMKDKGF 124
LDLI+K+ GL++AE Y + P S R VY LL NC + +++KAE + M+D GF
Sbjct: 109 QLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALL-NCYSQKKSLEKAEAIMQEMRDMGF 167
Query: 125 PVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
V + + N +L LY RL K +K+ +++ ME+ + L F+Y I ++ ++D+ GM++
Sbjct: 168 -VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEK 226
Query: 184 VVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLLPL 241
++ ++++ + D + + A Y+ KEKA MLK+ E + + R+ +LL L
Sbjct: 227 LLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLKKSEQFISGRSRRFGYEILLTL 286
Query: 242 YAELGKADQVARIWKLCES-NPWLDVC-MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
YA +G + RIW L ++ + + +A + + KL+ ++ AE F+ K
Sbjct: 287 YATMGNKTEXYRIWNLYKTIGKFFNTGYVAMVSSLLKLDDMDGAEKTFEEWLSGNKFFDF 346
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ L++ Y +L K + LV + E G + WDAL + E ++EKA L K
Sbjct: 347 RVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKK 406
Query: 360 A--QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
A +KP + ++ + D+ E + +R+ V+ + LV YI
Sbjct: 407 ALLATSQGWKPNPVTLSACLEYLKGKXDVEEAENLIRLLREQSLVSAYDS-DRLVN-YIR 464
Query: 418 AKTPA 422
++ P
Sbjct: 465 SEEPG 469
>gi|224137116|ref|XP_002327026.1| predicted protein [Populus trichocarpa]
gi|222835341|gb|EEE73776.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 192/412 (46%), Gaps = 11/412 (2%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNK-KLDFI 59
M+ P++ S L ++ EG L++ E+ + LR + Y +AL++ +W++ + +
Sbjct: 78 MENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQALEVYDWMKNRQERFRLS 137
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
D A LDLIAK+RG+ AE + +P +F+ VY LL V +KAE +F+ M
Sbjct: 138 PSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLNAYVQNRMREKAETLFDEM 197
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
+DKG+ + N + LY + + D+++ M ++N+KL +SY I + G
Sbjct: 198 RDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKLDIYSYNIWLSSCGSQGSA 257
Query: 179 TGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
M+QV E MKS+ I P+ +T + +A Y+ G+ EKAE L+ +E R
Sbjct: 258 DKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDCLRRVESRITGRDRIPYHY 317
Query: 238 LLPLYAELGKADQVARIWKLCE----SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL LY +G ++V R+W + + S P L A I + +L+ +E AE +++
Sbjct: 318 LLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGY-HAIISSLVRLDDIEGAEKIYEEWLSI 376
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ + Y L + K M E G W+ L + H+ +A
Sbjct: 377 KTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLEDGGKPNSNTWEILAQGHISERRTSEA 436
Query: 354 DSILLKA---QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
S L +A +KP ++ + D+ + E + +RQ G++
Sbjct: 437 LSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMANKEALEGFLRQSGHL 488
>gi|302143027|emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 211/443 (47%), Gaps = 11/443 (2%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ P++S+ L ++ EEG + E+ + +LR+R+ Y +AL++SEW+ + + F
Sbjct: 46 LGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKELCPFSP 105
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
A LDLI ++RGL+ AE+Y + + + +Y LL V + K+ +MK
Sbjct: 106 SARAVQLDLIGQVRGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMK 165
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+ GF T N L+ LY D+ +K+ DVL M++ + FSY++ I+ G +DL
Sbjct: 166 ELGFASTPLPYNGLMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLN 225
Query: 180 GMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
M++++E M+S+ I D T +++A Y+ G EKA LK+ E L + L
Sbjct: 226 SMEKILEEMESKSHIHIDWMTYSMVANFYIKAGLNEKALFFLKKAE-TKLHKDPLGYNHL 284
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG---KLNKVEEAEAVFKRMSKTWK 295
+ LYA LG ++ R+W+ ++ + I G KL ++E+ EA+ K +
Sbjct: 285 ISLYASLGSKAEMMRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGN 344
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ LL + ++ K + +++ + E G P +W + ++E +EKA
Sbjct: 345 CYDFRVPNTLLIGFCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFE 404
Query: 356 ILLKA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+ +A + ++P I+ D+ E ++ V + R + +
Sbjct: 405 CMKEAIAVLAENKGWRPKPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDR-EMYHAQ 463
Query: 412 VQAYINAKTPAYGIRDRMRADNV 434
++A I A GI D M+AD +
Sbjct: 464 IRASIRAGKEVDGILDSMKADKI 486
>gi|449434959|ref|XP_004135263.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Cucumis sativus]
gi|449478594|ref|XP_004155363.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Cucumis sativus]
Length = 489
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 205/436 (47%), Gaps = 10/436 (2%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ L K+ + + + E+ + LR R++Y AL+LSE + + ++ D A
Sbjct: 40 SVRLQLNKFIKSHKRVFKWEVGDTLRKLRDRKLYYPALKLSE-IMAKRGMNKTVSDQAIH 98
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDKGFP 125
LDL+AK RG+ AE+Y +PES + + Y +LL NC + +KAE +F ++K+ P
Sbjct: 99 LDLVAKARGIDAAENYFVSLPESSKNHLSYSSLL-NCYCKELLTEKAEALFEKIKELNLP 157
Query: 126 VTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
VT N L+ LY ++ + KV ++ M+ NV ++Y + + ND++G+++V
Sbjct: 158 VTPVPYNSLMTLYSKIGRPDKVCTIIQEMKAANVTFDPYTYIVWMRALAALNDISGVERV 217
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
++ MK +G++ D +T + LA YV+ EKA LK++E N + + L+ LY +
Sbjct: 218 IDEMKRDGVKGDWTTYSNLASIYVNANMFEKAAKALKDLEKINTRRDLIGFQFLITLYGQ 277
Query: 245 LGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
+G +V R+W +L + I+ KL + AE FK +
Sbjct: 278 IGDLTEVYRVWRSLRLAFPRTANISYLNMIQTLTKLKDLPGAEKCFKEWESGSPTYDIRI 337
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA- 360
AL+ Y +L K L ++ G W+ + +++ G+ + A + KA
Sbjct: 338 PNALIGAYTKGGLLEKAMALKERALRRGARPNAKTWEFFLNYYLKNGDFKLAGDCVAKAI 397
Query: 361 --QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ K+ P M + + D+ E +++ + F++L++ Y A
Sbjct: 398 GKGDRGKWIPSPEIIKSFMSHFEQEKDVDGAESFLEIVKKTVDSLESEVFESLIRTYSAA 457
Query: 419 KTPAYGIRDRMRADNV 434
+ + R++ +NV
Sbjct: 458 GRTSSSMSRRLKMENV 473
>gi|326531954|dbj|BAK01353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 518
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 202/417 (48%), Gaps = 10/417 (2%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
+ ++A+E +SR ++ A++ LR R YG AL++ W++++K++ + D+A+ LDLIA
Sbjct: 67 IDRWAQERGRVSRPDLQRAVSQLRRARRYGHALEILSWMDSHKEIKLLPLDHAARLDLIA 126
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
K+ G +AE Y K+P S E LL VA NV+KAE ++ G PV +
Sbjct: 127 KVHGTSQAEEYYNKLPNSASREAASFPLLHCYVAERNVQKAESFMASLQSIGLPVDPHSF 186
Query: 132 NQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
N+++ LY + +KV V+ LM++ N+ SY + ++ S D+T + V + M +
Sbjct: 187 NEMMKLYVATCEYEKVFSVIDLMKRNNIPRNALSYNLWMNACSVS-DVTSVQSVFKEMVN 245
Query: 191 EG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD 249
+G IE ST LA ++ G KA A L+ E R ++ YA LG +D
Sbjct: 246 DGTIEVGWSTYCTLANIFMKHGLNSKAFACLRTAETKLSTAQRLGYSFVMTCYAALGDSD 305
Query: 250 QVARIWKLCESNPWLDVC---MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
V R+W+ + P M+AI K+ ++ AE +F +K + LL
Sbjct: 306 GVMRLWEASKCVPGRIPSANYMSAILCLIKVGDIDRAEWIFGSWEVECRKHDVRVSNVLL 365
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK- 365
Y + + K + L M E G W+ L++ V+ +++KA + + KA K
Sbjct: 366 GAYVRNGWIEKAEKLHLHMLEKGGRPNYKTWEILMEGFVQSRQMDKAVNAMKKALSLMKG 425
Query: 366 --FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
++P I + ++G+ + +++ + ++++++AYI A T
Sbjct: 426 CHWRPPLRLVEAIATFFEEQGNTDDANRYIKVLQKFNLTS-LPLYKSVLRAYIKADT 481
>gi|356522970|ref|XP_003530115.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 546
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 192/407 (47%), Gaps = 14/407 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETN-KKLDFIERD 62
P + L ++ EG L++ E++ + LR + + +AL++ +W+ ++ E D
Sbjct: 93 PQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFRRALEVYDWMNNRPERFRVSESD 152
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
A LDLIAK+RGL AE++ + + + + Y LL V + +KAE +F+ M+ K
Sbjct: 153 AAIQLDLIAKVRGLSSAEAFFLSLEDKLKDKKTYGALLNVYVHSRSKEKAESLFDTMRSK 212
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G+ + + N ++ LY L++ D+L +MEK N++L ++Y I + G +
Sbjct: 213 GYVIHALPFNVMMTLYMNLNEYAKVDILASEMMEK-NIQLDIYTYNIWLSSCGSQGSVEK 271
Query: 181 MDQVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
M+QV E M K I P+ ST + +A Y+ + EKAE L+++EG R LL
Sbjct: 272 MEQVFEQMEKDPSIIPNWSTFSTMASMYIRMDQNEKAEECLRKVEGRIKGRDRIPFHYLL 331
Query: 240 PLYAELGKADQVARIWK----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
LY +GK D+V R+W + S P L A I + KL+ +E AE +++
Sbjct: 332 SLYGSVGKKDEVCRVWNTYKSIFPSIPNLGY-HAIISSLVKLDDIEVAEKLYEEWISVKS 390
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ L+ Y K +QM GC W+ L + H+ + +A S
Sbjct: 391 SYDPRIGNLLIGWYVKKGDTDKALSFFEQMLNDGCIPNSNTWEILSEGHIADKRISEAMS 450
Query: 356 IL----LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L + A ++P S ++ ++ D+ S E + +RQ
Sbjct: 451 CLKEAFMAAGGSKSWRPKPSYLSAFLELCQEQDDMESAEVLIGLLRQ 497
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 148/372 (39%), Gaps = 58/372 (15%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL---LILYKRLDKKKVADVLL 151
VYR + N N + EV N+ +++G +T + +++ L YKR ++ +V
Sbjct: 83 VYRRISLN---PNPQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRF--RRALEVYD 137
Query: 152 LMEK--ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M E ++++ I +D+ + L+ + ++ E D T L YV
Sbjct: 138 WMNNRPERFRVSESDAAIQLDLIAKVRGLSSAEAFFLSL--EDKLKDKKTYGALLNVYVH 195
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDV 266
KEKAE++ M H +++ LY E K D +A ++ E N LD+
Sbjct: 196 SRSKEKAESLFDTMRSKGYVIHALPFNVMMTLYMNLNEYAKVDILAS--EMMEKNIQLDI 253
Query: 267 CMAAI--EAWGKLNKVEEAEAVFKRMSK------TWKKLST------------KHYTALL 306
I + G VE+ E VF++M K W ST K L
Sbjct: 254 YTYNIWLSSCGSQGSVEKMEQVFEQMEKDPSIIPNWSTFSTMASMYIRMDQNEKAEECLR 313
Query: 307 KVYAD---------HKMLS-----KGKDLVKQMAESGCHIGP----LAWDALVKLHVEGG 348
KV H +LS KD V ++ + I P L + A++ V+
Sbjct: 314 KVEGRIKGRDRIPFHYLLSLYGSVGKKDEVCRVWNTYKSIFPSIPNLGYHAIISSLVKLD 373
Query: 349 EVEKADSILLK-AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
++E A+ + + ++ + P + L++ Y K+GD F +M G +
Sbjct: 374 DIEVAEKLYEEWISVKSSYDPRIGN--LLIGWYVKKGDTDKALSFFEQMLNDGCIPNSNT 431
Query: 408 FQTLVQAYINAK 419
++ L + +I K
Sbjct: 432 WEILSEGHIADK 443
>gi|22329290|ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g02150
gi|2317908|gb|AAC24372.1| Unknown protein [Arabidopsis thaliana]
gi|332189272|gb|AEE27393.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 524
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 194/413 (46%), Gaps = 17/413 (4%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLET-NKKLDFI 59
M+ P++ S L ++ + G L++ E+ + LR + +AL++ +W+ ++
Sbjct: 76 MEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLS 135
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
D A LDLI K+RG+ AE + ++PE+F+ VY +LL V + +KAE + N M
Sbjct: 136 ASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTM 195
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
+DKG+ + N ++ LY L + D ++ M++++++L +SY I + G +
Sbjct: 196 RDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSV 255
Query: 179 TGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
M+ V + MKS+ I P+ +T + +A Y+ G EKAE L+++E +R
Sbjct: 256 EKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHY 315
Query: 238 LLPLYAELGKADQVARIW----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL LY LG ++ R+W + S P L A + + ++ +E AE V++
Sbjct: 316 LLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGY-HALVSSLVRMGDIEGAEKVYEEWLPV 374
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ L+ Y + L + L M E G W+ L H + +A
Sbjct: 375 KSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEA 434
Query: 354 DSIL---LKAQQQNKFKP---MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ L A+ + ++P M S + + ++ D+ S E + +RQ G
Sbjct: 435 LTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEE---ESDVTSKEAVLELLRQSG 484
>gi|20453085|gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
gi|29028736|gb|AAO64747.1| At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 194/413 (46%), Gaps = 17/413 (4%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLET-NKKLDFI 59
M+ P++ S L ++ + G L++ E+ + LR + +A+++ +W+ ++
Sbjct: 76 MEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQAIEVYDWMNNRGERFRLS 135
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
D A LDLI K+RG+ AE + ++PE+F+ VY +LL V + +KAE + N M
Sbjct: 136 ASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTM 195
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
+DKG+ + N ++ LY L + D ++ M++++++L +SY I + G +
Sbjct: 196 RDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSV 255
Query: 179 TGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
M+ V + MKS+ I P+ +T + +A Y+ G EKAE L+++E +R
Sbjct: 256 EKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHY 315
Query: 238 LLPLYAELGKADQVARIW----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL LY LG ++ R+W + S P L A + + ++ +E AE V++
Sbjct: 316 LLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGY-HALVSSLVRMGDIEGAEKVYEEWLPV 374
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ L+ Y + L + L M E G W+ L H + +A
Sbjct: 375 KSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEA 434
Query: 354 DSIL---LKAQQQNKFKP---MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ L A+ + ++P M S + + ++ D+ S E + +RQ G
Sbjct: 435 LTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEE---ESDVTSKEAVLELLRQSG 484
>gi|356503236|ref|XP_003520417.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Glycine max]
Length = 555
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 201/421 (47%), Gaps = 15/421 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETN-KKLDFIERD 62
P + L ++ EG L++ E++ + LR + + +AL++ +W+ ++ E D
Sbjct: 92 PQVGSAEVLNQWENEGRHLTKWELSRVVKELRKYKRFPRALEVYDWMNNRPERFRVSESD 151
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
A LDLIAK+RG+ AE++ + + + + Y LL V + +KAE +F+ M+ K
Sbjct: 152 AAIQLDLIAKVRGVSSAEAFFLSLEDKLKDKRTYGALLNVYVHSRSKEKAESLFDTMRSK 211
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G+ + + N ++ LY L++ D+L +MEK N++L ++Y I + G +
Sbjct: 212 GYVIHALPINVMMTLYMNLNEYAKVDMLASEMMEK-NIQLDIYTYNIWLSSCGSQGSVEK 270
Query: 181 MDQVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
M+QV E M + I P+ ST + LA Y+ + EKAE L+++EG R LL
Sbjct: 271 MEQVFEQMERDPTIVPNWSTFSTLASMYIRMNQNEKAEKCLRKVEGRIKGRDRIPFHYLL 330
Query: 240 PLYAELGKADQVARIWKLCES----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
LY +GK D+V R+W +S P L A I + KL+ +E AE +++
Sbjct: 331 SLYGSVGKKDEVYRVWNTYKSIFPRIPNLGY-HAIISSLVKLDDIEGAEKLYEEWISVKS 389
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ L+ Y K +Q++ GC W+ L + H+ + +A S
Sbjct: 390 SYDPRIGNLLMGWYVKKDDTDKALSFFEQISNDGCIPNSNTWEILSEGHIADKRISEALS 449
Query: 356 IL----LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
L + A ++P S ++ ++ D+ S E + +RQ + ++ K + ++
Sbjct: 450 CLKEAFMVAGGSKSWRPKPSYLSAFLELCQEQNDMESAEVLIGLLRQSKF-SKIKVYASI 508
Query: 412 V 412
+
Sbjct: 509 I 509
>gi|147819856|emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 214/437 (48%), Gaps = 13/437 (2%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
+ TL K+ +EG + R ++ + LR + Y A Q+ EW+E +K D D A +
Sbjct: 45 VAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWMEKSKN-DLNNADRAIRI 103
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNN-VKKAEEVFNRMKDKGFPV 126
DL+AK G+ +AE+Y + ES + Y LL NC N V KA E+F ++K+ F
Sbjct: 104 DLLAKTEGIAQAENYFNSLQESAKTNKTYGALL-NCYCKENMVDKAVELFKKLKELNFVS 162
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
++ + N ++ LY R+ + +KV ++ ME++++ ++Y +L++ D ++QV+
Sbjct: 163 SALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVL 222
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E MK G+E D T LA YV G +KA L+++E + R+L+ LYA
Sbjct: 223 EKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAFRMLINLYART 282
Query: 246 GKADQVARIWK-LCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
+ V R W+ L ++P ++ + + A KL V E FK +
Sbjct: 283 SNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLS 342
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA----DSILL 358
+L+ Y + +M+ + L + +A+ G + D +K +++ +++ A D
Sbjct: 343 NVMLESYLNREMIEEANLLSESIAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGAS 402
Query: 359 KAQ-QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
KA + NK+ P + + ++ + + D+ S EK MR++ + K + +L++ YI
Sbjct: 403 KADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRKISRLDS-KIYDSLLRTYIA 461
Query: 418 AKTPAYGIRDRMRADNV 434
A + +RM+ D +
Sbjct: 462 AGKEEPLMSERMKDDGI 478
>gi|115473169|ref|NP_001060183.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|34393591|dbj|BAC83218.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113611719|dbj|BAF22097.1| Os07g0598500 [Oryza sativa Japonica Group]
gi|215706491|dbj|BAG93347.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 183/388 (47%), Gaps = 17/388 (4%)
Query: 16 AEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRG 75
A+ GN L E+ + LR RR + +AL++SEW+ + F+ +D+A LDLI ++ G
Sbjct: 88 AKPGNRLRHVELERIVKELRKRRRHRQALEVSEWMNAKGHVKFLPKDHAVHLDLIGEIHG 147
Query: 76 LQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQL 134
AE+Y +P+ + E Y LL NC V+K+ F +MK+ GF ++ N +
Sbjct: 148 SSAAETYFNNLPDKDKTEKPYGALL-NCYTRELLVEKSLAHFQKMKELGFVFSTLPYNNI 206
Query: 135 LILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG- 192
+ LY L + +KV V+ M+ + FSY+I I+ G D GM+ +E M+ E
Sbjct: 207 MGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTRADFFGMENTLEEMECEPK 266
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRWTCRLLLPLYAELGKADQV 251
I D +T A++A +Y+ G +EKA + LK+ E N+K+ + L+ LY LG +V
Sbjct: 267 IVVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSD-SYNHLISLYGHLGDKSEV 325
Query: 252 ARIWKLCESNPWLDV-----CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
R+W L SN + M A+ KLN++EEAE + K + + LL
Sbjct: 326 NRLWALQMSNCNRHINKDYTTMLAVLV--KLNEIEEAEVLLKEWESSGNAFDFQVPNVLL 383
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA----QQ 362
Y +L K + L+ + G +W + + E G+ KA + A
Sbjct: 384 TGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKGDAAKAYELTKNALCVYAP 443
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ P +I+ GD+ E
Sbjct: 444 NTGWIPRPGMIEMILKYLGDEGDVEEVE 471
>gi|224063635|ref|XP_002301239.1| predicted protein [Populus trichocarpa]
gi|222842965|gb|EEE80512.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 193/412 (46%), Gaps = 11/412 (2%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNK-KLDFI 59
M+ P++ S L ++ +G L++ E+ + LR + Y +AL++ +W+ + +
Sbjct: 78 MENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQALEVYDWMNNRQERFGLS 137
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
D A LDLIAK+RG+ AE + ++P +F+ +Y LL V +KAE + + M
Sbjct: 138 PSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLNAYVRNRMREKAESLIDEM 197
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
+ K + + N ++ LY +++ D+++ M ++N+KL +SY I + G
Sbjct: 198 RGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKLDIYSYNIWLSSCGLQGSA 257
Query: 179 TGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
M+QV E MKS+G I P+ +T + +A Y+ G+ EKAE L+ +E R
Sbjct: 258 DKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDCLRRVESRITGRDRIPYHY 317
Query: 238 LLPLYAELGKADQVARIWKLCE----SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL LY +G ++V R+W + + S P L A I + +++ +E AE +++
Sbjct: 318 LLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGY-HAMISSLVRMDDIEGAEKIYEEWLSI 376
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ + + L K + M E G +W+ L + H+ +A
Sbjct: 377 KTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLEEGGKPNSHSWEILAQGHISERRTSEA 436
Query: 354 DSILLKA---QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
S L +A +KP ++ + D+ S E + +RQ G++
Sbjct: 437 LSCLKEAFATPGSKSWKPNPANVSSFFKLCEEEVDMASKEALASFLRQSGHL 488
>gi|356555227|ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 486
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 203/448 (45%), Gaps = 18/448 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P+ S+ L + +GN L AE+ + +LR R + +ALQ+SEW+ F +Y
Sbjct: 33 PNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKRSRFSQALQISEWMHNKGVCIFSPTEY 92
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI K+ G AE+Y + + + Y LL V KA +MKD G
Sbjct: 93 AVHLDLIGKVHGFSSAETYFDALKDQHKTNKTYGALLNCYVRQRQTDKALSHLQKMKDLG 152
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F + N ++ LY + + +KV DVL M++ V FSY+I I+ G +D G++
Sbjct: 153 FASSPLTYNDIMCLYTNIGQHEKVPDVLREMKQNQVLPDNFSYRICINSYGVRSDFGGVE 212
Query: 183 QVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG--DNLKEHRWTCRLLL 239
+V++ M+++ I D +T +I A Y+ G A L++ E DN + L+
Sbjct: 213 RVLKEMETQPNIVMDWNTYSIAANFYIKAGLTRDAVCALRKSEERLDNKDGQGYN--HLI 270
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCM-----AAIEAWGKLNKVEEAEAVFKRMSKTW 294
LYA+LG ++V RIW L E N C+ +E+ KL +++EAE + K +
Sbjct: 271 SLYAQLGLKNEVMRIWDL-EKNA-CKRCINRDFTTLLESLVKLGELDEAEKILKEWESSD 328
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ ++ Y+ + K +++++ P W + ++ GE+EKA
Sbjct: 329 NCYDFGIPSIVIIGYSQKGLHEKALAMLEELQNKEKVTTPNCWSIVAGGYIHKGEMEKAF 388
Query: 355 SIL---LKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
L +NK +KP ++ G + E + +R V R + + T
Sbjct: 389 KCFKTALSLYVENKGWKPNAKVIAELLRWIGDNGSVEDAEVLVSLLRNAVPVNR-QMYHT 447
Query: 411 LVQAYINAKTPAYGIRDRMRADNVFPNK 438
L++ YI + RM D + NK
Sbjct: 448 LIKTYIRGGKEVDDLLGRMEKDGIDENK 475
>gi|449432307|ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
gi|449525818|ref|XP_004169913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 189/412 (45%), Gaps = 11/412 (2%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLET-NKKLDFI 59
M+ P++ S L ++ EG ++++ E++ + LR + + +AL++ +W+ ++
Sbjct: 79 MENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFERALEIYDWMSNREERFRLT 138
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
D A LDLI+K+RG++ AE Y ++P + +Y LL G +KAE + +M
Sbjct: 139 TSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLNAYAKGRQREKAENLLEKM 198
Query: 120 KDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
+ KGF N ++ LY + + +KV ++ M + +++L +SY I + G
Sbjct: 199 RTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQLDIYSYNIWLSSCGLQGST 258
Query: 179 TGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
M++V E MK + I + +T + +A Y+ G EKAE L+ +E + R
Sbjct: 259 EKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEECLRRVESRIVGRDRIPYHY 318
Query: 238 LLPLYAELGKADQVARIWKLCE----SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
L+ LY +G +++ R+W + + + P L A I A ++ VE AE +++
Sbjct: 319 LISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGY-HAIISALIRVGDVEGAEKIYEEWLTV 377
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ + Y SK + M E G W+ LV H + G V A
Sbjct: 378 KSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSSTWEILVDRHTKEGRVSDA 437
Query: 354 DSIL---LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+ A+ ++P + + D K GDI S E + +RQ Y+
Sbjct: 438 LASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLVGLLRQPKYL 489
>gi|326530906|dbj|BAK01251.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 511
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 191/400 (47%), Gaps = 16/400 (4%)
Query: 4 PDISIHSTLTKYAEE-GNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
PD + + ++A++ GN L E+ + LR RR + +AL++SEW+ + F+ +D
Sbjct: 69 PDTLLVPEIERWADKPGNRLRPVELERIVKELRKRRRHRQALEVSEWMSAKGHVRFLPKD 128
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKD 121
YA LDLI ++ G+ AE+Y +P+ + E Y LL NC V + F +MK+
Sbjct: 129 YAVHLDLIGQVHGIGAAEAYFNTLPDKDKTEKPYGALL-NCYTRELMVDGSLAHFQKMKE 187
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
GF +S N L+ LY + + +KV V+ M+ + FSY+I I+ G D G
Sbjct: 188 LGFVFSSLPYNNLMGLYTNIGQHEKVPSVIAEMKGSGIMPDNFSYRICINSYGTRADFFG 247
Query: 181 MDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
M+ +E M+ E I D +T A++A +Y+ G +EKA + LK+ E + T L+
Sbjct: 248 MENTLEDMECEPQIVVDWNTYAVVASNYIKGNLREKAISALKKAEAKIDIKDSDTYNHLI 307
Query: 240 PLYAELGKADQVARIWKLCESNPWLDV-----CMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
LY +LG ++ R+W L SN + M A+ +L+++EEAEA+ K +
Sbjct: 308 SLYGQLGDKSEMRRLWGLQMSNCKRHINKDYTTMLAMLV--RLDEIEEAEALLKEWESSE 365
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
LL Y ML K + L+ + G +W + + E G+ KA
Sbjct: 366 NAFDFHVPNVLLTGYRHKDMLDKAEALLDDFLKKGKMPPSTSWAIVAIGYAEKGDCAKAY 425
Query: 355 SILLKA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
++ A ++ + P + +I+ GD+ E
Sbjct: 426 ELIKNALCVYVPRSGWIPRPAMIEMILKYLGDEGDLKDVE 465
>gi|22328859|ref|NP_680735.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75146702|sp|Q84JR3.1|PP334_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g21705, mitochondrial; Flags: Precursor
gi|28393142|gb|AAO42004.1| unknown protein [Arabidopsis thaliana]
gi|28827500|gb|AAO50594.1| unknown protein [Arabidopsis thaliana]
gi|332659092|gb|AEE84492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 492
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 199/427 (46%), Gaps = 20/427 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S++ L + + G +S AE+ + +LR R+ + AL++S+W+ F ++
Sbjct: 37 PKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEH 96
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI ++ G AE Y + + E ++ + Y LL V NV+K+ F +MK+ G
Sbjct: 97 AVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMG 156
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F +S N ++ LY + + +KV VL M++ENV +SY+I I+ G DL +
Sbjct: 157 FVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIG 216
Query: 183 QVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+ M + + I D +T A+ AK Y+ GG ++A +LK E K+ L+ L
Sbjct: 217 GTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLITL 276
Query: 242 YAELGKADQVARIWKLCESNPWLDVC--------MAAIEAWGKLNKVEEAEAVFKRMSKT 293
YA LGK +V R+W L + DVC + +++ K++ + EAE V +
Sbjct: 277 YARLGKKIEVLRLWDLEK-----DVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSS 331
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ +++ Y M K + +++ +A G P +W+ + + E G +E A
Sbjct: 332 GNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENA 391
Query: 354 DSILLKA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+ A K++P + ++ G + E +R V + + +
Sbjct: 392 FKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNK-QMYH 450
Query: 410 TLVQAYI 416
LV+A I
Sbjct: 451 ALVKADI 457
>gi|293332912|ref|NP_001168310.1| hypothetical protein [Zea mays]
gi|223947377|gb|ACN27772.1| unknown [Zea mays]
gi|414586053|tpg|DAA36624.1| TPA: hypothetical protein ZEAMMB73_688721 [Zea mays]
Length = 513
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 192/430 (44%), Gaps = 26/430 (6%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL-ETNKKLDFIERDYASC 66
+ TL + E L + E+ LR R + ALQ+ +W+ E + D A
Sbjct: 93 VGRTLGAWDEGERRLDKWELCRIAKELRKFRRFNLALQVYDWMTERRDRFPLSSSDMAIQ 152
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLIAK+RG+ AE Y ++P++ + + Y +LL +K EE F +M+ KGF
Sbjct: 153 LDLIAKVRGVPHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKTEETFEQMRKKGFAS 212
Query: 127 TSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
+ CN L+ Y +D + +VL + M++ NV +Y I I D M+Q
Sbjct: 213 DTLPCNVLMNFY--VDSGEPDEVLAIIDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMEQ 270
Query: 184 VVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
V M E + + +T LA Y+ G EKAE LK+ E + L+ LY
Sbjct: 271 VFSQMIADESVVANWTTYTTLASMYLKLGNSEKAEECLKDAEKRTTGREKKCFHYLMTLY 330
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWG---------KLNKVEEAEAVFKRMSKT 293
+ LGK ++V RIW W I G ++ +E AE +++ +
Sbjct: 331 SHLGKKEEVYRIWN------WYKATFPMIHNLGYQELLSALIRIGDIEGAELLYEEWASK 384
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K LL YA +++K + V + E G + P W+ L ++ ++ +A
Sbjct: 385 SYSFDPKTMNILLAWYAKEGLITKAEQTVNRFVEKGGNPKPNTWEILATAYMNDDKISEA 444
Query: 354 DSILLKA---QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
S + KA + +K+KP ++ ++ + ++ D +++ + G A +++++
Sbjct: 445 LSCMEKATAVKSASKWKPRPTNVETLLASFKEKNDAEGADRLVSVLTSRG-CAEDEEYKS 503
Query: 411 LVQAYINAKT 420
L+ Y A T
Sbjct: 504 LIDTYAFAGT 513
>gi|255556039|ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541717|gb|EEF43265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 485
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 207/447 (46%), Gaps = 24/447 (5%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P+ S+ L + ++GN + E+ + +LR R + +AL++SEW+ F ++
Sbjct: 26 PNTSLVPELDNWVQDGNKVRVGELQRIIRDLRKRNRFTQALEVSEWMNKKGICIFSSTEH 85
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI K+RG AE+Y + + + + Y LL V ++ + +MK+ G
Sbjct: 86 AVQLDLIGKVRGFLSAENYFNNLMDHDKTDKTYGALLNCYVRQRQTDRSISHWQKMKEMG 145
Query: 124 FPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ A N ++ LY L +KV VL M++ + FSY+I I+ G +D+ GM+
Sbjct: 146 LASSPLAYNDIMCLYINLGLYEKVLHVLTEMKENKISPDNFSYRICINSYGARSDIQGME 205
Query: 183 QVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+V+ M+ G D +T A++A Y+ G +KA L++ E K+ L+ L
Sbjct: 206 KVLNEMECRLGNAMDWNTYAVVANFYIKAGLADKAVDALRKSEEKLDKKDGIGYNHLISL 265
Query: 242 YAELGKADQVARIWKLCESNPWLDVC--------MAAIEAWGKLNKVEEAEAVFKRMSKT 293
YA LG +V RIW L +S VC + +E+ KL +EEAE V K +
Sbjct: 266 YATLGIKSEVLRIWDLQKS-----VCKRRINRDFVTMLESLVKLGDLEEAEKVLKEWESS 320
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ ++ Y+ + + K + ++ + E G P +W + ++E GE KA
Sbjct: 321 GNFYDVRIPNIVVVGYSKNGLHEKAEASLEALMEKGRATTPNSWAMIASGYLEKGEKAKA 380
Query: 354 DSILLKAQQQN----KFKPMFSSYMLIMDQYAKRGDIHSTEKI--FHRMRQVGYVARFKQ 407
+ A N +KP + ++MD GD S E + F V +
Sbjct: 381 FECMKAAFSLNVEKKGWKP---NPRVVMDILIWLGDEGSPEDVEAFVASLSVAIPLNRQI 437
Query: 408 FQTLVQAYINAKTPAYGIRDRMRADNV 434
+ L++A I + A+ I DRM+ D +
Sbjct: 438 YHALLKAKIRSGRDAHEILDRMKTDKI 464
>gi|242076656|ref|XP_002448264.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
gi|241939447|gb|EES12592.1| hypothetical protein SORBIDRAFT_06g024190 [Sorghum bicolor]
Length = 515
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 193/430 (44%), Gaps = 26/430 (6%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL-ETNKKLDFIERDYASC 66
+ TL + E L + E+ LR R + ALQ+ +W+ E + D A
Sbjct: 95 VGRTLGAWDEGERRLDKWELCRIAKELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQ 154
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLIAK+RG+ AE Y ++P++ + + Y +LL +K E+ F +M+ KGF
Sbjct: 155 LDLIAKVRGVSHAEKYFDELPDAMKDKRTYGSLLNVYAQAMMKEKTEDTFEQMRKKGFAS 214
Query: 127 TSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
+ CN L+ Y +D + +VL + M++ NV +Y I I D M++
Sbjct: 215 DTLPCNVLMNFY--VDSGEPNEVLAIIDEMKERNVSFDVCTYNIWIKSCAAKQDAEEMER 272
Query: 184 VVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
V M E + + +T LA Y+ G EKAE LK+ E + L+ LY
Sbjct: 273 VFSQMIADESVVANWTTYTTLASMYIKLGNSEKAEECLKDAEKRTTGREKKCFHYLMTLY 332
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWG---------KLNKVEEAEAVFKRMSKT 293
+ LGK ++V RIW W I G ++ +E AE +++ +
Sbjct: 333 SHLGKKEEVYRIWN------WYKATFPMIHNLGYQELLSALVRIGDIEGAELLYEEWASK 386
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K LL YA +++K + + + E G + P W+ L +++ ++ +A
Sbjct: 387 SSSFDPKTMNILLAWYAKEGLITKAEQTLNRFVEKGGNPKPNTWEILATAYMKDDKISEA 446
Query: 354 DSILLKA---QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
S + KA + NK+KP ++ ++ + ++ D +++ + G A +++++
Sbjct: 447 LSCMEKATAIKSANKWKPRPTNVESLLASFKEKNDAEGADRLVSVLTSRG-CAEDEEYKS 505
Query: 411 LVQAYINAKT 420
L+ Y A T
Sbjct: 506 LINTYAFAGT 515
>gi|224114960|ref|XP_002316903.1| predicted protein [Populus trichocarpa]
gi|222859968|gb|EEE97515.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 205/422 (48%), Gaps = 11/422 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P IS+ L ++ EEG + E+ + LR R+ + +AL++S+W+ +N+ +F D
Sbjct: 12 PRISLAPVLDQWVEEGKKVKDYELRTIVKGLRERKRFKQALEVSQWMSSNRLCNFSPSDD 71
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI K+ GL+ AESY + + E + Y LL V G V+K+ +MK+ G
Sbjct: 72 AVRLDLIGKVHGLESAESYFKNLDEKDKIHKTYGALLNCYVRGGLVEKSLSHVQKMKELG 131
Query: 124 FPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F T+ N L+ LY +KV DVL M++ + FSY+I + G+ +D ++
Sbjct: 132 FFSTALNYNDLMCLYVNTGLLEKVPDVLSDMKENGISPDLFSYRICLKSYGERSDFDNVE 191
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+++ M+S+ I D T A +A Y+ G KEKA LK+ E + + ++ L+ L
Sbjct: 192 KILREMESQSHISMDWRTFATVANIYLEAGLKEKALVYLKKCE-EKVNKNALGYNHLISL 250
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWG---KLNKVEEAEAVFKRMSKTWKKLS 298
YA LG D++ R+W+L ++N + I G KL +EEAE + + + +
Sbjct: 251 YASLGNKDEMMRLWELAKANCKKQLNRDYITILGSLVKLGHLEEAEKLLQDWESSCQYYD 310
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
+ +L Y+ + K + +++ + E P +W + +++ +EKA +
Sbjct: 311 FRVPNVVLIGYSRKGLPEKAEAMLQDIIEKQKMKNPSSWSIISAGYMDKQNMEKAFECMK 370
Query: 359 KA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+A + N ++P + I++ D E F + + + + L+++
Sbjct: 371 EALAAETENNGWRPKPAMISNILNWLGDNRDAQEVEA-FVGLLETKVPKSREMYHALIKS 429
Query: 415 YI 416
YI
Sbjct: 430 YI 431
>gi|224077120|ref|XP_002305141.1| predicted protein [Populus trichocarpa]
gi|222848105|gb|EEE85652.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 203/438 (46%), Gaps = 12/438 (2%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ L + GN + AE+ + +LR R+ + ALQ+SEW+ F ++A
Sbjct: 44 SLEPELDSWVRSGNKVRVAELQRIIHDLRKRKRFSHALQVSEWMHKKDICIFSPSEHAVQ 103
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLI ++ G AE+Y + + + E Y LL V K+ +MK+ GF
Sbjct: 104 LDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVRQRETDKSILHLQKMKEMGFAK 163
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+S N ++ LY + + +KV VL M++ NV FSY++ I+ G +DL GM++++
Sbjct: 164 SSLTYNDIMCLYTNVGQHEKVPQVLNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKIL 223
Query: 186 EAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
M+ + I D +T A+ A Y+ G +KA LK+ E K+ L+ LYA+
Sbjct: 224 NEMEHQPDIVMDWNTYAVAANFYIIGDLTDKAIDTLKKSEARLDKKDGTGYNHLISLYAK 283
Query: 245 LGKADQVARIWKL----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LG +V R+W L CE + D + +E+ KL++ EEAE + K + +
Sbjct: 284 LGNKTEVLRLWDLEKSACERHINKDYII-MMESLLKLSEFEEAEKMLKEWESSGNFYDVR 342
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
L+ Y+ + K K L++ + E G P +W + + EV KA S + A
Sbjct: 343 VPNTLIIGYSRKGLCEKAKALLENLTEKGKMTLPNSWGIVAAGFFDKSEVAKAFSCMKAA 402
Query: 361 ---QQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+NK +KP I+ G E ++ V V R + + +++A I
Sbjct: 403 LCLYVENKGWKPNQRVINGILSWLGDEGSAEDAEAFVSSLKTVIPVNR-EMYHAVLKANI 461
Query: 417 NAKTPAYGIRDRMRADNV 434
A + + D M+ N+
Sbjct: 462 RAGKEVHRLLDGMKTYNI 479
>gi|357440753|ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
gi|355479702|gb|AES60905.1| WD repeat-containing protein [Medicago truncatula]
Length = 562
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 198/446 (44%), Gaps = 22/446 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRA-EIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
P S + K+ EEG+ L R ++ + LR + Y AL++ EW++ + +E D
Sbjct: 48 PKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKNKRYKHALEVCEWMKLQNDIKLVEGD 107
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
YA LDLI K+RGL AE + + +P+ RG+ LL V N KAE + ++M +
Sbjct: 108 YAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLHAYVQNNLTNKAEALMSKMSEC 167
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLME--KENVKLTQFSYKILIDIKGQSNDLTG 180
GF + N+++ LY + K+ V L E K N ++ +L+ ND+
Sbjct: 168 GFLRSPVPYNRMMSLY--ISNGKLEKVPKLFEELKVNTSPDVVTFNLLLTACASENDVET 225
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK----EKAEAMLKEMEGDNLKEHRWTCR 236
++V+ +K ++PD T + L Y+ EKA + LKEME +E R
Sbjct: 226 AERVLLQLKKAKVDPDWVTYSTLTNLYIRNASVDDCLEKAASTLKEMEKRTSRETRVAYS 285
Query: 237 LLLPLYAELGKADQVARIWK-----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
LL L+A +G D+V RIW C+ + VCM I + KL E ++K
Sbjct: 286 SLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCM--ISSLVKLGDFAGVENLYKEWE 343
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ LL Y D + + Q+ E G + +W+ L + +++ +V+
Sbjct: 344 SVSGTNDVRVSNLLLTSYVDQGQMEMAEIFCNQLVEKGVCLSYSSWELLTRGYLKKKDVK 403
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYA---KRGDIHSTEKIFHRMRQVGYVARFKQF 408
K KA + K L+ + + ++ I E++ +R G+V +
Sbjct: 404 KFLHYFGKA--ISSVKQWIPDPRLVQEAFTVIQEQAHIEGAEQLLVILRNAGHV-NTNIY 460
Query: 409 QTLVQAYINAKTPAYGIRDRMRADNV 434
++ Y A + +RM+ DNV
Sbjct: 461 NLFLKTYAAAGKMPLVVAERMKKDNV 486
>gi|225450579|ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product [Vitis vinifera]
Length = 498
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 214/437 (48%), Gaps = 13/437 (2%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
+ TL K+ +EG + R ++ + LR + Y A Q+ EW+E +K D D A +
Sbjct: 49 VAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYEWMEKSKN-DLNNADRAIRI 107
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNN-VKKAEEVFNRMKDKGFPV 126
DL+AK G+ +AE+Y + ES + Y LL NC N + KA E+F ++K+ F
Sbjct: 108 DLLAKTEGIAQAENYFNSLQESAKTNKTYGALL-NCYCKENMLDKAVELFKKLKELNFVS 166
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
++ + N ++ LY R+ + +KV ++ ME++++ ++Y +L++ D ++QV+
Sbjct: 167 SALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLLMNSYASVKDFEAVEQVL 226
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ MK G+E D T LA YV G +KA L+++E + R+L+ LYA
Sbjct: 227 DKMKKRGVERDWFTYGNLANIYVDAGHTKKANYALQKLEQNKNLHDPEAFRMLINLYART 286
Query: 246 GKADQVARIWK-LCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
+ V R W+ L ++P ++ + + A KL V E FK +
Sbjct: 287 SNLEGVNRAWESLKLAHPKINNKSYLIMLLALSKLGDVAGLEKCFKEWESGCSTYDVRLS 346
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA----DSILL 358
+L+ Y + +++ + L + +A+ G + D +K +++ +++ A D
Sbjct: 347 NVMLESYLNREIIEEANLLSESIAKRGPELKLKTLDLFMKFYLKKHQLDLAMKYLDMGAS 406
Query: 359 KAQ-QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
KA + NK+ P + + ++ + + D+ S EK MR++ + K + +L++ YI
Sbjct: 407 KADPENNKWFPTEETITMFLEYFEEVKDVDSAEKFCETMRKISRLDS-KIYDSLLRTYIA 465
Query: 418 AKTPAYGIRDRMRADNV 434
A + +RM+ D +
Sbjct: 466 AGKEEPLMSERMKDDGI 482
>gi|224125490|ref|XP_002329818.1| predicted protein [Populus trichocarpa]
gi|222870880|gb|EEF08011.1| predicted protein [Populus trichocarpa]
Length = 494
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 201/438 (45%), Gaps = 18/438 (4%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ L + + G + AE+ + + R R+ + ALQ+SEW+ F +A
Sbjct: 44 SLEPELDSWIQNGKKVKVAELQRIIHDFRMRKRFTHALQVSEWMNKKGICIFSPSQHAVQ 103
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLI ++ G AE+Y + + + E Y LL V K+ +MK+ GF
Sbjct: 104 LDLIGRVHGFVSAENYFNNLRDQDKNEKTYGALLNCYVQKRETDKSISHLQKMKEMGFAK 163
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+S + N ++ LY + + +KV VL M++ NV FSY++ ++ G DL GM++++
Sbjct: 164 SSLSYNDIMCLYTNVGQHEKVPQVLNEMKENNVSPDNFSYRLCMNSYGARGDLEGMEKML 223
Query: 186 EAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
M+ + I D ++ A+ A Y+ GG +KA LK+ E K+ L+ LYA
Sbjct: 224 NEMEHQPDIVVDWNSYAVAASSYIKGGLTDKAIDSLKKSETRLDKKDGTGYNHLISLYAT 283
Query: 245 LGKADQVARIWKL----CE---SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
LG+ +V R+W L CE + ++++ + + KL++ EE E V K +
Sbjct: 284 LGEKTEVLRLWDLEKSTCERPINKDYINIMASLV----KLDEFEEVEKVLKEWEASGNFY 339
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ L+ Y+ + K K L++ + E G P W + + EV KA S +
Sbjct: 340 DVRVPNTLIIGYSGKGLYEKAKALLENLTEKGKATLPNIWGKVAAGFFDKNEVAKAFSCM 399
Query: 358 LKA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
A ++ ++KP I+ G E ++ V + R + + +++
Sbjct: 400 KAALCLYEENKEWKPNQKVITGILSWLGDEGSAEDAEAFVSSLKNVIPMNR-EMYHAVLK 458
Query: 414 AYINAKTPAYGIRDRMRA 431
A+I A +G+ D M+
Sbjct: 459 AHIRAGKEVHGLLDGMKT 476
>gi|449479000|ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 493
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 173/362 (47%), Gaps = 5/362 (1%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P SI L ++ EEG + ++++ + LR + +ALQL EW+ + D
Sbjct: 48 PRTSIVRVLDQWVEEGRQVKQSDLQTLIKQLRKFGRFNQALQLCEWVRNERNQCLSTGDI 107
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A L LI+K RGL++AE Y I ES R VY LL V N+KKAE + +M++ G
Sbjct: 108 AVELHLISKARGLEQAEKYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVG 167
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F T + N +L LY L K +K+A++L ME+ + +F+Y I ++ ++D+T M+
Sbjct: 168 FMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAAASDITNME 227
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC-RLLLP 240
+++ M+++ + D T ++ Y G E + MLK+ E + +W + L+
Sbjct: 228 KLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKWLAYQYLMT 287
Query: 241 LYAELGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LYA +G D+V R+W L + + + I + KL+ ++ AE + K
Sbjct: 288 LYAAIGNKDEVYRVWNLYTNLRKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDTSFD 347
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
+ ++ Y + K + + ++ E+G WD L + G K L
Sbjct: 348 FRIPNMMINSYCMKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGLTNKVAETLK 407
Query: 359 KA 360
KA
Sbjct: 408 KA 409
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 195 PDSSTQAILAKH-YVSGGRKEKAEAMLKEM--EGDNLKEHRWTCRLLLPLYAELGKADQV 251
P ST+ L + Y +G + +L + EG +K+ + L+ + G+ +Q
Sbjct: 30 PSPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEEGRQVKQS--DLQTLIKQLRKFGRFNQA 87
Query: 252 ARI--WKLCESNPWLDVCMAAIEAW--GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
++ W E N L A+E K +E+AE F + ++ + K Y ALL
Sbjct: 88 LQLCEWVRNERNQCLSTGDIAVELHLISKARGLEQAEKYFSSIGESSR--DHKVYGALLH 145
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
Y ++K L K + ++++M E G PL+++A++ L+ G+ EK LLK ++
Sbjct: 146 CYVENKNLKKAEAIMQKMREVGFMKTPLSYNAMLNLYAHLGKHEKLAE-LLKEMEEMGIG 204
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
P +Y + M+ YA DI + EK+ +M VA
Sbjct: 205 PDRFTYNIRMNAYAAASDITNMEKLLSKMEADPLVA 240
>gi|108862755|gb|ABA99305.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215704853|dbj|BAG94881.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712260|dbj|BAG94387.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 514
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 197/438 (44%), Gaps = 11/438 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S L ++AEEG + + ++ + LR R + AL++ EW+ T ++ + D+
Sbjct: 55 PKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEMRLLPGDH 114
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDL+AK+RGL AE + + +PE +G LL V KAE + M G
Sbjct: 115 AVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAG 174
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ + N ++ LY + +KV +++ + + + +Y I + + N + +
Sbjct: 175 YLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSKKNSVKAAE 233
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V + MK E + PD T ++L Y++ G K L EME ++ R LL LY
Sbjct: 234 KVYDLMKDERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLY 293
Query: 243 AELGKADQVARIW-KLCES-NPWLDV---CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
A L + R+W K+ E+ + D CM + + + + EAE+ +
Sbjct: 294 ASLSDRGNLDRVWRKMRETFRKFSDTEYKCM--LTSLTRFGDIAEAESFYSEWESASGTR 351
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
++ +L Y + M+ K + + + + G W+ V ++ G ++K L
Sbjct: 352 DSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECL 411
Query: 358 LKAQQ-QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
KA K+ P I Q ++GDI + EK+ R+ GYV + + ++++ Y
Sbjct: 412 KKALSCLEKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTT-EIYNSVLRTYA 470
Query: 417 NAKTPAYGIRDRMRADNV 434
A+ + +RM D V
Sbjct: 471 KAELMPLIVDERMDQDKV 488
>gi|357146877|ref|XP_003574143.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Brachypodium distachyon]
Length = 511
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 175/357 (49%), Gaps = 8/357 (2%)
Query: 4 PDISIHSTLTKYAEE-GNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
P + + ++A++ GN L E+ + LR RR + +AL++SEW+ + F+ +D
Sbjct: 69 PSTLLVPEIERWADKPGNRLRPVELERIVKELRKRRRHRQALEVSEWMSAKGLVKFLPKD 128
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKD 121
+A LDLI ++ G+ AE+Y K+ + + E Y LL NC V K+ F +MK+
Sbjct: 129 HAVHLDLIGQVHGVGAAEAYFNKLADKDKTEKPYGALL-NCYTRELLVDKSLAHFQKMKE 187
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
GF +S N L+ LY L + +KV V+ M+ + FSY+I I+ G D G
Sbjct: 188 LGFVFSSLPYNNLMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGARADFFG 247
Query: 181 MDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
M+ +E M+ E I D +T A+LA +Y+ G ++KA + L++ E + T L+
Sbjct: 248 MENTLEEMECEPQIVVDWNTYAVLANNYIKGNLRDKAISALQKAEAKIDIKDSDTYNHLM 307
Query: 240 PLYAELGKADQVARIWKLCESNPWLDV---CMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LY +LG +V R+W L SN + + KL+++EEAEA+ K +
Sbjct: 308 SLYGQLGDKSEVKRLWALQMSNCKRHINKDYTTMLAMLLKLDEIEEAEALLKEWESSENA 367
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
LL Y +L K + L+ + G +W + + E G+V KA
Sbjct: 368 FDFHVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPTSTSWAIVAIGYAEKGDVAKA 424
>gi|297734632|emb|CBI16683.3| unnamed protein product [Vitis vinifera]
Length = 423
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 188/411 (45%), Gaps = 14/411 (3%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLET-NKKLDFI 59
M+ P++ S L ++ EG L++ E+ + LR + + AL++ EW+ ++
Sbjct: 1 MENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLS 60
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
D A LDLIAK+ G+ AE Y ++P++ + + +Y LL V KAE + ++
Sbjct: 61 SSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKL 120
Query: 120 KDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
++KG+ T N ++ LY L + KV ++ M +N++L +SY I +
Sbjct: 121 RNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLS---SCEST 177
Query: 179 TGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
M+QV E MK E I P+ +T + +A Y+ G+ EKAE LK++E R
Sbjct: 178 ERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHY 237
Query: 238 LLPLYAELGKADQVARIWKLCESN----PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
L+ LY G +V R W + +S P L A I + ++ +E AE +++
Sbjct: 238 LISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGY-HALISSLVRVGDLEGAEKIYEEWLSV 296
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ LL Y L K + + M E+G W+ L + + ++ A
Sbjct: 297 KSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDA 356
Query: 354 DSILLK---AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
S + A+ N +KP + +D + D + E + +RQ+GY
Sbjct: 357 LSCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGY 407
>gi|224085447|ref|XP_002307578.1| predicted protein [Populus trichocarpa]
gi|222857027|gb|EEE94574.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 198/431 (45%), Gaps = 11/431 (2%)
Query: 11 TLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLI 70
T+ K+ EEG+++ + E+ + LR + Y AL++ EW+ + + DYA LDLI
Sbjct: 59 TIRKWKEEGHNVRKYELNRIVRELRKLKRYKHALEVCEWMTKQSDIKLVPGDYAVHLDLI 118
Query: 71 AKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFA 130
AK+RGL AE + + IP+ R LL V ++ KAE + +M + GF +
Sbjct: 119 AKIRGLNSAEKFFEDIPDKMRDYQACSALLHVYVQNKSISKAEALMEKMSECGFLKNALP 178
Query: 131 CNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMK 189
N +L +Y + +KVA+++ ++K+ +Y + + ND+ ++V +K
Sbjct: 179 YNHMLSVYVANGQLEKVAEIIQELKKKTSP-DVVTYNMWLTACASQNDVETAEKVFMELK 237
Query: 190 SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD 249
++PD T + L Y+ EKA LKE+E K++R T LL L+A + D
Sbjct: 238 KSKLDPDWVTYSTLTNLYIKKECLEKAAYTLKEVEKRASKKNRVTYSSLLSLHANMKDKD 297
Query: 250 QVARIWKLCES--NPWLDV---CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
+ R W +S N D CM I + KL + AE ++ ++
Sbjct: 298 GLHRTWNKMKSVFNKMNDAEYNCM--ISSLVKLGEFGGAENLYNEWESVSATRDSRVSNI 355
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ-QQ 363
+L Y + + ++ ++M + G W+ L H++ ++EK KA
Sbjct: 356 VLASYINRNQMEDAENFCQRMVQKGITPCYTTWELLTCGHLKTEQMEKVLENFKKALCSV 415
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY 423
K+ P I +RGDI EK+ +R G+V+ + +L++ Y A
Sbjct: 416 RKWTPDKRLIGDIFKNLEERGDIEGAEKLLVILRDAGHVSTM-IYNSLLRTYAKAGKMPV 474
Query: 424 GIRDRMRADNV 434
I +RM+ DNV
Sbjct: 475 IIEERMQKDNV 485
>gi|449438086|ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 486
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 185/397 (46%), Gaps = 7/397 (1%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P SI L ++ EEG ++++++ + LRT + ALQL EW +
Sbjct: 48 PRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHALQLCEWERNERNKCPSPGHI 107
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A L LI+K RGL++AE Y I ES R VY LL V N+KKAE + +M++ G
Sbjct: 108 AIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVG 167
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F T + N +L LY +L K + D L+ ME+ + +F+Y + ++ ++D+T M+
Sbjct: 168 FMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRMNAYAAASDITNME 227
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC-RLLLP 240
+++ M+++ + D + Y G E + +MLK+ E + +W + L+
Sbjct: 228 KLLSKMEADPLVATDWHIYFTVGNGYFKAGLSENSISMLKKAEQLIGDKQKWLAYQYLMT 287
Query: 241 LYAELGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
LYA +G D+V R+W L + + + I + KL+ ++ AE + K
Sbjct: 288 LYAAIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWESGDTSFD 347
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
K ++ Y + K + + ++ E+G AWD L + G KA L
Sbjct: 348 FKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRAYAWDRLASGYHSNGLTNKAAETLK 407
Query: 359 KAQQQN--KFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
KA + ++KP + ++ G++ E+I
Sbjct: 408 KAISVSPPRWKPNYDILAACLEYLKTNGNVELAEEII 444
>gi|242091818|ref|XP_002436399.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
gi|241914622|gb|EER87766.1| hypothetical protein SORBIDRAFT_10g001830 [Sorghum bicolor]
Length = 536
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 208/468 (44%), Gaps = 60/468 (12%)
Query: 26 EIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK 85
E+ + + +R +Y AL+LSE + T + ++ D A CLDLIAK RG+ AE Y
Sbjct: 53 EVGVCVRRMRRNALYRPALKLSEVM-TRRGMNPTVSDQAICLDLIAKSRGIAAAEKYFLD 111
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+PE+ + + Y LL + +KAE + +M + F T+ N L+ +Y ++++ +
Sbjct: 112 LPETSKTHLTYGALLNSYCKELMTEKAESLMAKMSELNFAFTAMPFNSLMTMYTKVNQPE 171
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV ++ M+ ++V F+Y + + ND+ G+++V+E MK +G + PD +T + L
Sbjct: 172 KVPGIIQYMKADDVLPHVFTYNVWMRALAALNDIPGVERVIEEMKRDGRVAPDWTTYSNL 231
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNP 262
A YV G EKAEA LKE+E N + L+ LY +V R+W+ L +NP
Sbjct: 232 ASIYVDAGLFEKAEAALKELEKRNTSNDVEAYQFLITLYGRTQNLVEVHRVWRSLKRNNP 291
Query: 263 WLD--VCMAAIEAWGKLNKVEEAEAVFK--------------------RMSKT------- 293
+ + I+ L + AEA FK +S T
Sbjct: 292 RMANMSYLNMIQVLANLKDLPAAEACFKEWEARHIHPPKTKAKDSGADNISTTDPESSSN 351
Query: 294 ---------------WKKLSTKH-------YTALLKVYADHKMLSKGKDLVKQMAESGCH 331
K L KH A++K Y ML K + K+ G
Sbjct: 352 LPNNQSGIKETGDEAAKDLQLKHPKYDIRVANAMIKAYIAEGMLDKAVAVKKRAKMHGGR 411
Query: 332 IGPLAWDALVKLHVEGGEVEK----ADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDI 386
+ W+ ++ H++ G+++ AD + K + + P + +M + + D+
Sbjct: 412 LNAKTWEIFMEHHLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDV 471
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
E+ +++V F+ L++ Y A G+R R++ +NV
Sbjct: 472 DGAEQYVESLKKVQKDLGTPVFEPLLRTYAAAGKKFPGMRQRLKIENV 519
>gi|15222438|ref|NP_172238.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163930|sp|Q940Q2.1|PPR19_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07590, mitochondrial; Flags: Precursor
gi|15809864|gb|AAL06860.1| At1g07590/F22G5_2 [Arabidopsis thaliana]
gi|332190025|gb|AEE28146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 206/446 (46%), Gaps = 19/446 (4%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+++ S L + +G + ++ A+ LR +AL+L EW+ + E +Y+
Sbjct: 79 VTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRLGELEYSY 138
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
L+ KL G+ + E ++P+ F+ E++Y L+ C+ ++ A E +M++ G+
Sbjct: 139 LLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYR 198
Query: 126 VTSFACNQLLILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+ N+L+I ++K +A L LM+ + +Y IL+ ++ +++ G+ +
Sbjct: 199 TSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKA 258
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME----GDNLKEHRW-TCRLLL 239
+ MK G+EP+ + ILA + AEA +E+E GDN W T +L+
Sbjct: 259 FDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDN-----WSTLDILM 313
Query: 240 PLYAELGKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
LY LGK ++AR W + + + A EA+ ++ ++ AE ++ M
Sbjct: 314 ILYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLK 373
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL------VKLHVEGGEVE 351
T+ + +LL VY ++ K + ++M +G + + L KL E +
Sbjct: 374 ETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNI 433
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+ L ++ P + + I++ +A++GD+ ++EK+F ++ Y + L
Sbjct: 434 EMGLNLKTSKSIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNAL 493
Query: 412 VQAYINAKTPAYGIRDRMRADNVFPN 437
+AY+ AK + RM P+
Sbjct: 494 FKAYVKAKVYDPNLFKRMVLGGARPD 519
>gi|302798621|ref|XP_002981070.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
gi|300151124|gb|EFJ17771.1| hypothetical protein SELMODRAFT_444770 [Selaginella moellendorffii]
Length = 1138
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 195/414 (47%), Gaps = 23/414 (5%)
Query: 43 ALQLSEWLETNKKLDFI--ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLL 100
AL++++W+ ++ F +D +DL ++ + KAE +++ R EV Y LL
Sbjct: 714 ALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNALL 773
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK--RLDKKKVADVLLLM---EK 155
+ +AE +F +K G + ++ N L +Y+ RLD A+VL+L +K
Sbjct: 774 LSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLRLD----AEVLMLAKEAQK 829
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
V+L Y +L+ K + L ++++ + S T +A YVS GR +K
Sbjct: 830 LGVELDMCFYNLLLPAKFRVQGLEDVEKLYATITSPRDRTRFFTCLAMANIYVSAGRNDK 889
Query: 216 AEAML----KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC--ESNPWLDVCMA 269
ML + ME + + R +L+ +YA L +V R W+ + P +
Sbjct: 890 VLEMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTEDYCC 949
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLS-TKHYTALLKVYADHKMLSKGKDLVKQMA-E 327
I AWGKL V AE +F+ K L + + A++ VY+ M + + LV++M E
Sbjct: 950 IIRAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVRRMEYE 1009
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ----QQNKFKPMFSSYMLIMDQYAKR 383
G + P + LV L+ + G++ K S L AQ ++ +F P+ ++ ++ A
Sbjct: 1010 LGVKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQACGKKERRFTPLAATLWAALNTLADA 1069
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPN 437
GD+ + E+ R ++ GY + L++A++ A P +RM AD V PN
Sbjct: 1070 GDVDTAEETLTRWKRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLADGVVPN 1123
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 190/441 (43%), Gaps = 15/441 (3%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
L ++ EEGN L + + M LR + AL++++W+ K+ D +D+
Sbjct: 98 LKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLDDVILRMDMAV 157
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
+ + +++A+ +K+ + Y T+ + A++ + + K+
Sbjct: 158 RAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDITF 217
Query: 132 NQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
+ L LY+R KV + +E +K L+ K + + ++ +++ +
Sbjct: 218 SILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQLVP 277
Query: 191 EGIE---PDSSTQAILAKHYVSGGRKEKAEAML----KEMEGDNLKEHRWTCRLLLPLYA 243
G + ST +++A Y+S G +KA+ +L K M+ + + R T +L+ +Y+
Sbjct: 278 AGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHILISMYS 337
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
+ D + R+WK E D +A IE+ G+ ++V AE FK + +
Sbjct: 338 TMKNRDGMERVWKKIEDLKAQDY-VAMIESCGRADEVGSAEKYFKEADRKGLLNQPSLFA 396
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ-- 361
ALL VYA K + L K+M E L + ++ ++ +++A IL A+
Sbjct: 397 ALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNARNIDRAVEILELAEAA 456
Query: 362 --QQNKFKPMFSSYMLIMDQYAKR-GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ + +P ++ ++ A+ GD+ E + R+ Y + L++ Y+ A
Sbjct: 457 GMRDGRSRPFLGTFCDVLKTIARETGDVALAETLLADWRKGKYRTDIAVYNHLLRVYLKA 516
Query: 419 KTPAYG-IRDRMRADNVFPNK 438
G R+ +N+ P +
Sbjct: 517 GKQVQGPFLKRLAGNNMKPTR 537
>gi|125549215|gb|EAY95037.1| hypothetical protein OsI_16851 [Oryza sativa Indica Group]
Length = 511
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 190/425 (44%), Gaps = 24/425 (5%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL-ETNKKLDFIERDYASC 66
+ TL + E L + E+ LR R + ALQ+ +W+ E + D A
Sbjct: 91 VGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQ 150
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLIAK+RG+ AE Y +++P+ + + Y +LL +K E F +M+ KGF
Sbjct: 151 LDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFAT 210
Query: 127 TSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+ N L+ Y ++ + +L+ +ME+ NV +Y I I D M+QV
Sbjct: 211 DTLPFNVLMNFYVDAEEAEKVSILIDEMMER-NVAFDVCTYNIWIKSCAAMQDADAMEQV 269
Query: 185 VEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
M + E + + +T LA ++ G EKAE LKE E + L+ LY+
Sbjct: 270 FNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYS 329
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWG---------KLNKVEEAEAVFKRMSKTW 294
LGK ++V R+W W I G +L +E AE +++ +
Sbjct: 330 HLGKKEEVYRVWN------WYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKS 383
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K LL YA ++K + + + E G + P W+ L +++ G+ +A
Sbjct: 384 SSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEAL 443
Query: 355 SILLKAQ---QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
S L KA +K++P ++ ++ + ++ D S +++ + +R +++++L
Sbjct: 444 SCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRS-RRCEENEEYKSL 502
Query: 412 VQAYI 416
+ Y+
Sbjct: 503 INTYV 507
>gi|297799892|ref|XP_002867830.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313666|gb|EFH44089.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 197/423 (46%), Gaps = 12/423 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S++ L + + G +S AE+ + +LR R+ + AL++S+W+ F ++
Sbjct: 37 PKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEH 96
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI ++ G AE Y + + E ++ E Y LL V NV+K+ F +MK+ G
Sbjct: 97 AVHLDLIGRVYGFVTAEEYFENLKEQYKNEKTYGALLNCYVRQQNVEKSLLHFQKMKEMG 156
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F +S N ++ LY + + +KV VL M++ENV +S++I I+ G +DL +
Sbjct: 157 FVSSSLTYNNIMCLYTNIGQHEKVPGVLDEMKEENVAPDNYSFRICINAFGAMSDLERIG 216
Query: 183 QVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
++ M + D +T A+ AK Y+ GG ++A +LK E K+ L+ L
Sbjct: 217 GILRDMERRPDFTMDWNTYAVAAKFYIDGGDCDRAVELLKMSEYRLEKKDGEGYNHLITL 276
Query: 242 YAELGKADQVARIWKL----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
YA LG +V R+W+L C+ D + +++ K++ ++EAE V +
Sbjct: 277 YARLGNKIEVLRLWELEKEACKRRINQDY-LTVLQSLMKIDGLKEAEVVLTEWESSGNCY 335
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ +++ Y M K + +++ +A G P +W + + E G + A +
Sbjct: 336 DFRVPNTVIRGYTGKSMEEKAEAMLEDLARRGKTTTPESWGLVATAYAEKGALGNAFKCM 395
Query: 358 LKA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
A + K++P ++ G + E +R V + + + LV+
Sbjct: 396 KTALGIEVENRKWRPGLKLVTSVLSWLGGEGSLKEVESFVASLRNCIGVNK-QMYHALVK 454
Query: 414 AYI 416
A I
Sbjct: 455 ADI 457
>gi|15235508|ref|NP_192191.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213327|sp|Q9SY07.1|PP302_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g02820, mitochondrial; Flags: Precursor
gi|4263527|gb|AAD15353.1| hypothetical protein [Arabidopsis thaliana]
gi|7269767|emb|CAB77767.1| hypothetical protein [Arabidopsis thaliana]
gi|332656833|gb|AEE82233.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 212/461 (45%), Gaps = 21/461 (4%)
Query: 11 TLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLI 70
T+ K+ EEG+ + + E+ + LR + Y AL++ EW+ + + DYA LDLI
Sbjct: 80 TIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLI 139
Query: 71 AKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFA 130
+K+RGL AE + + +P+ RG +LL + V KAE +F +M + GF +
Sbjct: 140 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 199
Query: 131 CNQLLILYKRLDKKKVADVLLLMEKENVKLTQ--FSYKILIDIKGQSNDLTGMDQVVEAM 188
N +L +Y + + + V +L+++ ++ + +Y + + ND+ G ++V
Sbjct: 200 YNHMLSMY--ISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKA 257
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
K E + PD T ++L Y EKA LKEME K++R L+ L+A LG
Sbjct: 258 KEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDK 317
Query: 249 DQVARIWKLCESN-------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
D V WK +S+ +L + A + KL + E+A+ ++ +
Sbjct: 318 DGVNLTWKKVKSSFKKMNDAEYLSMISAVV----KLGEFEQAKGLYDEWESVSGTGDARI 373
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+L Y + + G+ +++ E G + W+ L +++ ++EK KA
Sbjct: 374 PNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKA- 432
Query: 362 QQNKFKPMFSSYMLI---MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ K + L+ + ++G++ EK+ +++ GYV + + +L++ Y A
Sbjct: 433 -IDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYV-NTQLYNSLLRTYAKA 490
Query: 419 KTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
A + +RM DNV ++ + R T +S +
Sbjct: 491 GEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISSTI 531
>gi|225453344|ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 187/410 (45%), Gaps = 14/410 (3%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLET-NKKLDFI 59
M+ P++ S L ++ EG L++ E+ + LR + + AL++ EW+ ++
Sbjct: 67 MENPEMGSASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLS 126
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
D A LDLIAK+ G+ AE Y ++P++ + + +Y LL V KAE + ++
Sbjct: 127 SSDAAIQLDLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKL 186
Query: 120 KDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
++KG+ T N ++ LY L + KV ++ M +N++L +SY I +
Sbjct: 187 RNKGYATTPLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLS---SCEST 243
Query: 179 TGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
M+QV E MK E I P+ +T + +A Y+ G+ EKAE LK++E R
Sbjct: 244 ERMEQVFEQMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHY 303
Query: 238 LLPLYAELGKADQVARIWKLCESN----PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
L+ LY G +V R W + +S P L A I + ++ +E AE +++
Sbjct: 304 LISLYGSTGNKAEVYRAWNIYKSKFPNIPNLGY-HALISSLVRVGDLEGAEKIYEEWLSV 362
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ LL Y L K + + M E+G W+ L + + ++ A
Sbjct: 363 KSSYDPRIGNLLLGCYVKEGFLEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDA 422
Query: 354 DSILLK---AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
S + A+ N +KP + +D + D + E + +RQ+G
Sbjct: 423 LSCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMG 472
>gi|297603118|ref|NP_001053460.2| Os04g0544400 [Oryza sativa Japonica Group]
gi|255675659|dbj|BAF15374.2| Os04g0544400 [Oryza sativa Japonica Group]
Length = 571
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 192/439 (43%), Gaps = 24/439 (5%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL-ETNKKLDFIERDYASC 66
+ TL + E L + E+ LR R + ALQ+ +W+ E + D A
Sbjct: 91 VGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQ 150
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLIAK+RG+ AE Y +++P+ + + Y +LL +K E F +M+ KGF
Sbjct: 151 LDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFAT 210
Query: 127 TSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+ N L+ Y ++ + +L+ +ME+ NV +Y I I D M+QV
Sbjct: 211 DTLPFNVLMNFYVDAEEAEKVSILIDEMMER-NVAFDVCTYNIWIKSCAAMQDADAMEQV 269
Query: 185 VEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
M + E + + +T LA ++ G EKAE LKE E + L+ LY+
Sbjct: 270 FNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYS 329
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWG---------KLNKVEEAEAVFKRMSKTW 294
LGK ++V R+W W I G +L +E AE +++ +
Sbjct: 330 HLGKKEEVYRVWN------WYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKS 383
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K LL YA ++K + + + E G + P W+ L +++ G+ +A
Sbjct: 384 SSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEAL 443
Query: 355 SILLKAQ---QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
S L KA +K++P ++ ++ + ++ D S +++ + +R +Q +
Sbjct: 444 SCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRSRRCEENEEQSDSH 503
Query: 412 VQAYINAKT-PAYGIRDRM 429
V + T P+ G RM
Sbjct: 504 VASRPKGPTRPSKGPNSRM 522
>gi|224119780|ref|XP_002331159.1| predicted protein [Populus trichocarpa]
gi|118487894|gb|ABK95769.1| unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus trichocarpa]
Length = 490
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 213/443 (48%), Gaps = 13/443 (2%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
+ ++S+ L ++ + + + E+ + LR+R +Y A++LSE + +++ ++ D
Sbjct: 34 SSEVSVRQQLNQFLKSSKRVFKWEVGDTIKKLRSRNLYYPAVKLSETM-SSRGMNKTVSD 92
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKD 121
A LDL+AK RG+ AE+Y +PE+ + Y LL NC ++AE + +MK+
Sbjct: 93 QAIHLDLVAKTRGIPAAENYFIDLPETSKNLRTYGALL-NCYCKELMTEEAEALIEKMKE 151
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
++S + N L+ LY ++ + +++ ++ M+ +NV ++Y + + ND++G
Sbjct: 152 LNLGLSSMSYNSLMTLYTKVGQPERIPAIIQEMKADNVMPDSYTYNVWMRALAAVNDISG 211
Query: 181 MDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+++V+E MK +G + + +T + LA YV G +KAE LKE+E N + + + L+
Sbjct: 212 VERVIEEMKRDGRVAANWTTYSNLASIYVDAGYFDKAEKALKELEKINANKDLFAFQFLI 271
Query: 240 PLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LY GK +V RIW +L + I+ L V AE F+
Sbjct: 272 TLYGRTGKLIEVYRIWRSLRLAFPKTANISYLNMIQVLVNLKDVPGAEKCFREWESGCST 331
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE----- 351
+ ++ YA ++ K ++L ++ G W+ +++ G+V+
Sbjct: 332 YDIRVANVVISAYAKEGLVDKAEELKERARRRGAKPNSKTWEIFCDYYLKNGDVKLGVDC 391
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
A+++ K+ P +M + ++ D+ E + +++ + F++L
Sbjct: 392 IANAVSAGRGNGQKWVPSPVIVGSLMAHFEQQKDVDGAEDLIEILKKAVDDVAVEVFESL 451
Query: 412 VQAYINAKTPAYGIRDRMRADNV 434
++ Y A + +R R++ +NV
Sbjct: 452 IRTYAAAGRKSQLMRRRLKMENV 474
>gi|32488964|emb|CAE04345.1| OSJNBb0038F03.9 [Oryza sativa Japonica Group]
Length = 511
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 189/424 (44%), Gaps = 24/424 (5%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL-ETNKKLDFIERDYASC 66
+ TL + E L + E+ LR R + ALQ+ +W+ E + D A
Sbjct: 91 VGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQ 150
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLIAK+RG+ AE Y +++P+ + + Y +LL +K E F +M+ KGF
Sbjct: 151 LDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFAT 210
Query: 127 TSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+ N L+ Y ++ + +L+ +ME+ NV +Y I I D M+QV
Sbjct: 211 DTLPFNVLMNFYVDAEEAEKVSILIDEMMER-NVAFDVCTYNIWIKSCAAMQDADAMEQV 269
Query: 185 VEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
M + E + + +T LA ++ G EKAE LKE E + L+ LY+
Sbjct: 270 FNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYS 329
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWG---------KLNKVEEAEAVFKRMSKTW 294
LGK ++V R+W W I G +L +E AE +++ +
Sbjct: 330 HLGKKEEVYRVWN------WYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKS 383
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K LL YA ++K + + + E G + P W+ L +++ G+ +A
Sbjct: 384 SSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEAL 443
Query: 355 SILLKAQ---QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
S L KA +K++P ++ ++ + ++ D S +++ + +R +++++L
Sbjct: 444 SCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMNVLRS-RRCEENEEYKSL 502
Query: 412 VQAY 415
+ Y
Sbjct: 503 INTY 506
>gi|255573975|ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532680|gb|EEF34462.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 490
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 209/447 (46%), Gaps = 21/447 (4%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
+ ++ + L ++ + + + E+ + LR+R +Y AL+LSE + + + ++ D
Sbjct: 34 SSEVKVREQLNQFLKSSKRVYKWEVGDTLKKLRSRGLYYPALKLSEAM-SKRGMNKTVSD 92
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKD 121
A LDL+AK RG+ AE + +PE+ + + Y LL NC ++AE + +MK+
Sbjct: 93 QAIHLDLVAKTRGIPAAEIFFIDLPETSKNHLTYGALL-NCYCNQLMTEEAEALMEKMKE 151
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
++S + N L+ LY ++ + +++ ++ M+ +++ ++Y + + ND++G
Sbjct: 152 LNLGLSSMSYNSLMTLYTKIGQPERIPGIIQEMKSDSIMPDSYTYNVWMRALAAVNDISG 211
Query: 181 MDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
++V+E MK +G + D +T + LA YV EKAE LKE+E N+ + L+
Sbjct: 212 AERVIEEMKRDGRVAADWTTYSNLASIYVDAQLFEKAEKTLKELEKRNVHRDHSAFQFLI 271
Query: 240 PLYAELGKADQVARIWKLCE------SN-PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
LY +G ++ RIW+ SN +L++ I+ L + AE F+
Sbjct: 272 TLYGRIGNLHELYRIWRSLRLAFPKTSNISYLNM----IQVLVNLKDLPGAEKCFREWES 327
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ L+K YA +L K ++L ++ G W+ + E G+++
Sbjct: 328 NCSGYDIRVANVLIKAYAKKGLLEKAEELKERAIGRGAKPNAKTWEIFSDYYFENGDIKL 387
Query: 353 ADSILLKAQQQN-----KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+ L A + K+ P M + ++ D+ E +++
Sbjct: 388 SVECLANAISKGRGDGQKWIPSPEVVASFMAHFEQQKDVDGAEGFIEILKKATDDVEANV 447
Query: 408 FQTLVQAYINAKTPAYGIRDRMRADNV 434
F++L++ Y A + +R R++ +NV
Sbjct: 448 FESLIRTYAAAGRTSQVLRRRLKMENV 474
>gi|125532539|gb|EAY79104.1| hypothetical protein OsI_34210 [Oryza sativa Indica Group]
Length = 513
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 207/442 (46%), Gaps = 15/442 (3%)
Query: 4 PDISIHSTLTKY--AEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
P I + L ++ AEE + +S+ E+ + LR RR + +AL+LS W+ + L
Sbjct: 61 PRIPLAPVLEQWWLAEE-HPVSKPELQSLVKYLRRRRRFSQALELSMWMTERRHLHLSPG 119
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
D A L+LI+K+ GL KA Y +P R Y +LL V+KAEE+F M+
Sbjct: 120 DVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYTEAERVEKAEELFENMRG 179
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G S+A N ++ LY ++ + ++V + ME+ + F+ L+ D+
Sbjct: 180 MGM-ANSYAYNAMMNLYSQIGQVERVHSMYKSMEEGGIVPDIFTIDNLVSAYADVEDVEA 238
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG--DNLKEHRWTCRLL 238
+++V+E + S AI+ K ++ G +E+A +E E K+ R L
Sbjct: 239 IEKVLEKASCNNLMSWHSF-AIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFL 297
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L +YA+L +V RIW + S C M I K+N + AE ++
Sbjct: 298 LTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWESKH 357
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
++ LL Y ++ K + LV Q + G W L + + G+ KA
Sbjct: 358 VYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTPFSNTWYKLAGGYFKVGQASKAA 417
Query: 355 SILLK--AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+ K A N++KP ++ ++ ++ +A++ ++ + E++ ++++ + R + L+
Sbjct: 418 DLTKKALASASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTR-DVYHGLL 476
Query: 413 QAYINAKTPAYGIRDRMRADNV 434
+ Y+NA PA + DRM+ D +
Sbjct: 477 KTYVNAGEPASDLLDRMKKDGI 498
>gi|359480173|ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 211/439 (48%), Gaps = 16/439 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ TL ++ +EG +++ E++ + LR R + AL++ +W+E N+K+ F DYA
Sbjct: 59 SVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWME-NRKIFFSYADYAVR 117
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDKGFP 125
LDL++K +GL AE Y + S + + Y TLL NC + +KA +F +M + F
Sbjct: 118 LDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLL-NCYCKEKMEEKALALFEKMDELNFA 176
Query: 126 VTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
TS N L+ L+ RL K ++ L+ M+K ++ F+Y IL+ + ND+ G ++V
Sbjct: 177 STSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERV 236
Query: 185 VEAMKSEGIEPDS-STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+E +K E + S +T + LA YV+ EKAE LK++E + R L+ LYA
Sbjct: 237 LEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYA 296
Query: 244 ELGKADQVARIWKLCESNPWLDVCMA---AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
+ +V R+W +S M+ ++A LN V+ + F+ + +
Sbjct: 297 GINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVR 356
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL--AWDALVKLHVEGGEVEKADSILL 358
++ + M+ + ++ + + GP A D + H++ E++ A +
Sbjct: 357 LANVAVRAFLGWDMIKDAESILYEAVKRSS--GPFYTALDMFMAHHLKVREIDTALKYME 414
Query: 359 KAQQQ---NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + N+++P + + + + D+ EK ++ + + +Q L+Q
Sbjct: 415 AAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNISGLDS-NAYQLLLQTX 473
Query: 416 INAKTPAYGIRDRMRADNV 434
+ A +R RM+ D++
Sbjct: 474 VAAGRTEPEMRKRMKEDDI 492
>gi|17064738|gb|AAL32523.1| Unknown protein [Arabidopsis thaliana]
gi|27311917|gb|AAO00924.1| Unknown protein [Arabidopsis thaliana]
Length = 532
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 212/461 (45%), Gaps = 21/461 (4%)
Query: 11 TLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLI 70
T+ K+ EEG+ + + E+ + LR + Y AL++ EW+ + + DYA LDLI
Sbjct: 80 TIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLI 139
Query: 71 AKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFA 130
+K+RGL AE + + +P+ RG +LL + V KAE +F +M + GF +
Sbjct: 140 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 199
Query: 131 CNQLLILYKRLDKKKVADVLLLMEKENVKLTQ--FSYKILIDIKGQSNDLTGMDQVVEAM 188
N +L +Y + + + V +L+++ ++ + +Y + + ND+ G ++V
Sbjct: 200 YNHMLSMY--ISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKA 257
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
K E + PD T ++L Y EKA L+EME K++R L+ L+A LG
Sbjct: 258 KEEKLNPDWVTYSVLTNLYAKTDNVEKARLALREMEKLVSKKNRVAYASLISLHANLGDK 317
Query: 249 DQVARIWKLCESN-------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
D V WK +S+ +L + A + KL + E+A+ ++ +
Sbjct: 318 DGVNLTWKKVKSSFKKMNDAEYLSMISAVV----KLGEFEQAKGLYDEWESVSGTGDARI 373
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+L Y + + G+ +++ E G + W+ L +++ ++EK KA
Sbjct: 374 PNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKA- 432
Query: 362 QQNKFKPMFSSYMLI---MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ K + L+ + ++G++ EK+ +++ GYV + + +L++ Y A
Sbjct: 433 -IDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYV-NTQLYNSLLRTYAKA 490
Query: 419 KTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
A + +RM DNV ++ + R T +S +
Sbjct: 491 GEMALIVEERMAKDNVELDEETKELIRLTSQMRVTEISSTI 531
>gi|357165075|ref|XP_003580262.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Brachypodium distachyon]
Length = 513
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 191/428 (44%), Gaps = 22/428 (5%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL-ETNKKLDFIERDYASC 66
+ TL + E L + E+ LR R + ALQ+ +W+ E + D A
Sbjct: 93 VGRTLADWDEGERRLDKWELCRVARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQ 152
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDL+AK+RG+ AE Y + +P+ + + Y +LL +K E+ F +M+ KG+
Sbjct: 153 LDLVAKVRGVPHAEEYFESLPDPLKDKRTYGSLLNVYAQARMKEKTEDTFEQMRKKGYAS 212
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N L+ Y +++ +KV+ V M++ NV +Y I I D GMD+V
Sbjct: 213 DTLPFNVLMNFYVDVEEPQKVSAVTDEMKERNVSFDVCTYNIWIKSFAAMKDADGMDRVF 272
Query: 186 EAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
M E + + +T LA ++ G EKAE LKE E + L+ LY+
Sbjct: 273 NQMIADESVVANWTTYTTLASMHIKLGNFEKAEVCLKEAEKRTTGRDKKCFHFLITLYSY 332
Query: 245 LGKADQVARIWKLCESNPWLDVCMAAIEAWG---------KLNKVEEAEAVFKRMSKTWK 295
L K ++V RIW W + I G +L +E AE +++ +
Sbjct: 333 LQKKEEVYRIWN------WYKATFSTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSS 386
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K LL Y+ + K + + + E G + P W+ L +++ ++ +A S
Sbjct: 387 SFDPKTMNILLAWYSREGFVVKAEQTLNRFVEKGGNPKPNTWEILASAYLKDNQLSEALS 446
Query: 356 ILLKA---QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+ KA + ++++P S+ ++ + + D S +++ + G A +++++L+
Sbjct: 447 CMEKAAAVKSASRWRPRPSNVESLLAYFKENNDTDSADRLMGVLTSRG-CAENEEYKSLI 505
Query: 413 QAYINAKT 420
Y A T
Sbjct: 506 NTYALAGT 513
>gi|115457716|ref|NP_001052458.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|32490390|emb|CAE04700.1| OSJNBa0041M06.2 [Oryza sativa Japonica Group]
gi|38344779|emb|CAE01505.2| OSJNBb0026L04.10 [Oryza sativa Japonica Group]
gi|113564029|dbj|BAF14372.1| Os04g0320200 [Oryza sativa Japonica Group]
gi|125543501|gb|EAY89640.1| hypothetical protein OsI_11170 [Oryza sativa Indica Group]
gi|125589896|gb|EAZ30246.1| hypothetical protein OsJ_14297 [Oryza sativa Japonica Group]
gi|215767374|dbj|BAG99602.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 204/457 (44%), Gaps = 50/457 (10%)
Query: 26 EIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK 85
E+ + + LR + +Y AL+LSE + + ++ D A LDL+AK RG+ AE Y
Sbjct: 53 EVGVCVRRLRKQALYRPALKLSEVM-ARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLD 111
Query: 86 IPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK- 143
+PE+ + + Y LL NC + +KAE + +MK+ F T+ N L+ LY ++++
Sbjct: 112 LPETSKTHLTYGALL-NCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQH 170
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAI 202
+KV V+ M+ ++V ++Y + + D+ G+++V+E MK +G + PD +T +
Sbjct: 171 EKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSN 230
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
LA YV G EKAEA LKE+E N + L+ LYA +V R+W+ + N
Sbjct: 231 LASIYVDAGLFEKAEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQ 290
Query: 263 WLDVCMA---AIEAWGKLNKVEEAEAVFKRMSKTW------------------------- 294
M+ I+A L + AEA FK +
Sbjct: 291 PRRANMSYLNMIQALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKA 350
Query: 295 ------------KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
K + A++K Y M K + K+ G + W+ ++
Sbjct: 351 TKDKGTDGELKHPKYDIRVANAMIKAYITEGMFDKAVAVKKRAKMRGGRLNAKTWEIFME 410
Query: 343 LHVEGGEVEK----ADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+++ G+++ AD + K + + P +MD + K D+ EK ++
Sbjct: 411 HYLKEGDLKMVHWCADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLK 470
Query: 398 QVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
+V F+ LV+ Y A G+R R++ +NV
Sbjct: 471 KVQKDLGTVVFEPLVRTYAAAGKKLPGMRHRLKIENV 507
>gi|242096946|ref|XP_002438963.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
gi|241917186|gb|EER90330.1| hypothetical protein SORBIDRAFT_10g029040 [Sorghum bicolor]
Length = 502
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 166/348 (47%), Gaps = 15/348 (4%)
Query: 16 AEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRG 75
A N L ++ + LRTRR + +AL++SEW+ + F+ +D+A LDLI + G
Sbjct: 75 ARPENHLRDVDLRRIVKELRTRRRHRQALEVSEWMNLKGHVKFLPKDHAVHLDLIGHIHG 134
Query: 76 LQKAESYIQKIPESFRGEVVYRTLLANCVAGNN-VKKAEEVFNRMKDKGFPVTSFACNQL 134
+ AE+Y + + + E Y LL NC V KA F +MK+ GF T+ N L
Sbjct: 135 VGAAETYFNNLSDKDKTEKPYGALL-NCYTRERLVDKALAHFQKMKELGFVFTALPYNNL 193
Query: 135 LILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG- 192
+ LY +++ ++V V+ M+ + FSY+I I+ G D G++ +E M+ E
Sbjct: 194 MSLYTNIEQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMECEPQ 253
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
I D +T ++A Y+ G +EKA + LK+ E + R L+ LY LG +V
Sbjct: 254 IVVDWNTYTVVASQYIKGDLREKAYSALKKAEAKMGIKDLAAYRHLISLYGHLGDKSEVK 313
Query: 253 RIWKLCESN-------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
R+W + SN + ++ + KL+++ EAE + K + + K L
Sbjct: 314 RLWAVQMSNCQRHLNTDYTNILAVLV----KLDEIAEAEDLLKEWETSKNEFDFKVPNVL 369
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
L Y +L K + L+ G +W+ + + E G+V +A
Sbjct: 370 LTWYCQKGLLDKAEALLDGFLIKGKMPPSTSWEIVASGYTEKGDVARA 417
>gi|115482784|ref|NP_001064985.1| Os10g0501300 [Oryza sativa Japonica Group]
gi|22165054|gb|AAM93671.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432901|gb|AAP54477.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639594|dbj|BAF26899.1| Os10g0501300 [Oryza sativa Japonica Group]
Length = 513
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 207/442 (46%), Gaps = 15/442 (3%)
Query: 4 PDISIHSTLTKY--AEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
P I + L ++ AEE +S+ E+ + LR R + +AL+LS W+ + L
Sbjct: 61 PRIPLAPVLEQWWLAEE-RPVSKPELQSLVKYLRRRCRFSQALELSMWMTERRHLHLSPG 119
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
D A L+LI+K+ GL KA Y +P R Y +LL V+KAEE+F M+
Sbjct: 120 DVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRCYAEAERVEKAEELFENMRG 179
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G S+A N ++ LY ++ + ++V + ME+ + F+ L+ D+
Sbjct: 180 MGM-ANSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPDIFTIDNLVSAYADVEDVEA 238
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG--DNLKEHRWTCRLL 238
+++V+E + S AI+ K ++ G +E+A +E E K+ R L
Sbjct: 239 IEKVLEKASCNNLMSWHSF-AIVGKVFMKAGMQERALQAFQESEKRITARKDGRVAYGFL 297
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L +YA+L +V RIW + S C M I K+N + AE ++
Sbjct: 298 LTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLLKMNDIVGAEKAYEEWESKH 357
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
++ LL Y ++ K + LV Q + G + W L + + G+V KA
Sbjct: 358 VYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSNTWYKLAGGYFKVGQVSKAA 417
Query: 355 SILLK--AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+ K A N++KP ++ ++ ++ +A++ ++ + E++ ++++ + R + L+
Sbjct: 418 DLTKKALASASNEWKPDLANVLMSINYFAEQKNVEAAEEMASLLQRLVPLTR-DVYHGLL 476
Query: 413 QAYINAKTPAYGIRDRMRADNV 434
+ Y+NA PA + DRM+ D +
Sbjct: 477 KTYVNAGEPASDLLDRMKKDGI 498
>gi|297849054|ref|XP_002892408.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338250|gb|EFH68667.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 201/441 (45%), Gaps = 9/441 (2%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+++ S L + +G + ++ A+ LR +AL+L EW+ + E +Y+
Sbjct: 81 VTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEWIIRERPYRPGELEYSY 140
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
L+ KL G+ + E ++P+ F+ E++Y L+ C+ ++ A E +M++ G+
Sbjct: 141 LLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYR 200
Query: 126 VTSFACNQLLILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+ N+L+I ++K +A L LM+ + +Y IL+ ++ +++ G+ +
Sbjct: 201 TSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKA 260
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
+ MK G+EP+ + ILA + AEA +E+E + T +L+ LY
Sbjct: 261 FDGMKKAGVEPNEVSYCILAMAHAVARLYTVAEAYTEEIEKSVTGNNWSTLDILMILYGR 320
Query: 245 LGKADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
LGK ++ R W + + + A EA+ ++ ++ AE ++ M T+ +
Sbjct: 321 LGKEKELVRTWNVIRGFHHVRSKSYLLATEAFAQVGNLDRAEELWLEMKNVRGLKETEQF 380
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL------VKLHVEGGEVEKADSI 356
+LL VY ++ K + ++M G + + L KL E + + S
Sbjct: 381 NSLLSVYCKDGLIEKAIGVFREMMGDGFKPNSITYRHLALGCAKAKLMKEALKNIEMGSN 440
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
L + P + + I++ +A++GD+ ++EK+F ++ Y + L +AY+
Sbjct: 441 LKTSNSIRSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAYV 500
Query: 417 NAKTPAYGIRDRMRADNVFPN 437
AK + RM P+
Sbjct: 501 KAKVYDPNLFKRMVLGGARPD 521
>gi|302801578|ref|XP_002982545.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
gi|300149644|gb|EFJ16298.1| hypothetical protein SELMODRAFT_421999 [Selaginella moellendorffii]
Length = 1138
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 193/412 (46%), Gaps = 19/412 (4%)
Query: 43 ALQLSEWLETNKKLDFI--ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLL 100
AL++++W+ ++ F +D +DL ++ + KAE +++ R EV Y LL
Sbjct: 714 ALEIADWMALSRPRPFTLTTKDNIFRMDLASRCGSVGKAERIFERLAPEHRSEVAYNALL 773
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM---EKEN 157
+ +AE +F +K G + ++ N L +Y++L A+VL+L +K
Sbjct: 774 LSYTKKKKRGRAERLFKELKATGTISSCYSLNLLASMYRQLGLD--AEVLMLAKEAQKLG 831
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
V+L Y +L+ K + L ++++ + S T +A YVS GR +K
Sbjct: 832 VELDMCFYNLLLPAKFRVQGLEEVEKLYATITSPRDRTRFFTCLAMANIYVSAGRNDKVL 891
Query: 218 AML----KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC--ESNPWLDVCMAAI 271
ML + ME + + R +L+ +YA L +V R W+ + P + I
Sbjct: 892 EMLELIDQGMEAGTIVKQRRRYNVLISMYASLEDGARVERTWERLKQQRQPNTEDYCCII 951
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLS-TKHYTALLKVYADHKMLSKGKDLVKQMA-ESG 329
AWGKL V AE +F+ K L + + A++ VY+ M + + LV++M E G
Sbjct: 952 RAWGKLGHVVRAETIFQVAEANEKSLKYSTVFNAMMFVYSVAGMREEAEGLVQRMEYELG 1011
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQ----QQNKFKPMFSSYMLIMDQYAKRGD 385
+ P + LV L+ + G++ K S L AQ ++ +F P+ ++ ++ A GD
Sbjct: 1012 VKLDPWCYHHLVLLYAKAGDIGKMLSTLRAAQAGGKKERRFTPLAATLWAALNTLADAGD 1071
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPN 437
+ + E+ R ++ GY + L++A++ A P +RM D V PN
Sbjct: 1072 VDTAEETLTRWKRSGYRVTTGLYNRLLRAHLVAARPTERFVERMLVDGVVPN 1123
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 190/441 (43%), Gaps = 15/441 (3%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
L ++ EEGN L + + M LR + AL++++W+ K+ D +D+
Sbjct: 98 LKEWEEEGNVLDKEMLRAIMLKLRKWKRGSLALEVADWMYYTKQFPQDLDDVILRMDMAV 157
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
+ + +++A+ +K+ + Y T+ + A++ + + K+
Sbjct: 158 RAKKIRRAQKIFKKLQAWEKTTDAYNTMFLIFSQRKMILHADDFYYKFKEAKLKPNDITF 217
Query: 132 NQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
+ L LY+R KV + +E +K L+ K + + ++ +++ +
Sbjct: 218 SILACLYRRCGLHNKVVRLQEDIEAAGMKPCVCFLNNLMVSKYELHGISSAEEIFNQLVP 277
Query: 191 EGIE---PDSSTQAILAKHYVSGGRKEKAEAML----KEMEGDNLKEHRWTCRLLLPLYA 243
G + ST +++A Y+S G +KA+ +L K M+ + + R T +L+ +Y+
Sbjct: 278 AGSDLKRSHLSTYSMMAASYLSAGMHDKAQNLLEVIEKAMDQGSFPKLRRTYHILISMYS 337
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
+ D + R+WK E D +A IE+ G+ ++V AE FK + +
Sbjct: 338 TMKNRDGMERVWKKIEDLKAQDY-VAMIESCGRADEVGSAEKYFKEADRKGLLNQPSLFA 396
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ-- 361
ALL VYA K + L K+M E L + ++ ++ +++A IL A+
Sbjct: 397 ALLGVYAGKGQADKAEKLFKKMKEQDVSRDALCYHYIILANLNAKNIDRAVEILELAEAA 456
Query: 362 --QQNKFKPMFSSYMLIMDQYAKR-GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ + +P ++ ++ AK GD+ E + R+ Y + L++ Y+ A
Sbjct: 457 GMRDGRSRPFLGTFCDVLKTIAKETGDVALAETLLADWRKGKYRTDIAVYNHLLRVYLKA 516
Query: 419 KTPAYG-IRDRMRADNVFPNK 438
G R+ +N+ P +
Sbjct: 517 GKQVQGPFLKRLAGNNMKPTR 537
>gi|148909871|gb|ABR18022.1| unknown [Picea sitchensis]
Length = 561
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 216/456 (47%), Gaps = 33/456 (7%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S L ++ EG ++ + + + LR + AL++ EW+ +KK D
Sbjct: 106 PKRSAVEELERWITEGREVKKWVLREIVRELRKYYRHKHALEVFEWM--SKKFPCSVGDR 163
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A L LIAK+ G+ AE Y + + + Y LL V N++K+E + +KD G
Sbjct: 164 AMHLGLIAKVHGIASAEKYYVDLHHYEKNHLTYFALLNCYVQEKNIEKSEAIMEELKDLG 223
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F T+F +++ LY ++ +KV V+ M+K+ + L Y I + L+ MD
Sbjct: 224 FIKTAFPYTEMMTLYMNTEQFEKVPLVIQEMKKKGISLDIHCYNIWMRSYAA---LSDMD 280
Query: 183 QVVEAM----KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD----NLKEHRWT 234
QV E + + I D S + LA Y++ +KA + LKEME K+ +
Sbjct: 281 QVAEVFNEIERDDNINTDWSIYSTLANIYINAKVLDKAGSALKEMENKMKEIETKKDQLA 340
Query: 235 CRLLLPLYAELGKADQVARIWKLCE-SNPWLD----VCMAAIEAWGKLNKVEEAEAVFKR 289
L+ L+ LG D+V RIW+ E + P + VC+ + + + +E AE K+
Sbjct: 341 YNHLISLHGRLGNKDEVYRIWQSFELAFPKMTNRSYVCL--LSSLVGMGDIEGAEVFIKK 398
Query: 290 MSKTWKKLST----KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
W+ + T + Y ALL Y + L K + L++++ + G W+ L + ++
Sbjct: 399 ----WESMKTFDDSRIYYALLNAYIEKGWLQKAELLLERVVDKGGKPNAKTWETLAEGYI 454
Query: 346 EGGEVEKADSIL---LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+ ++ KA + L + + ++P + + ++ + K+GD+ S E+ F +R V +V
Sbjct: 455 QNEQIHKAMEAMKRSLSIEGNSPWQPKSVNVLALLKHFEKQGDVKSAEEFFKILRGVKFV 514
Query: 403 ARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNK 438
+ + + +L++ Y+ I + M DNV P++
Sbjct: 515 ST-EIYNSLLRTYVYVGKVPPRISELMLEDNVSPDE 549
>gi|225468646|ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 204/443 (46%), Gaps = 13/443 (2%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
+ ++S+ L + + + + E+ + LR R+ + AL+LSE + + ++ D
Sbjct: 33 SSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETM-AKRGMNMTISD 91
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKD 121
A LDLI K RG+ AE+Y +PE+ + + Y LL NC + +KAE + RMK+
Sbjct: 92 QAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALL-NCYCKELLTEKAEALMERMKE 150
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
++S N L+ LY ++ + +K+ ++ ++ ++ ++Y I + ND++G
Sbjct: 151 LKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDISG 210
Query: 181 MDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+++V+E MK +G + D +T + LA YV G EKAE LKE+E N + L+
Sbjct: 211 VERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRDLTAFQFLI 270
Query: 240 PLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LY +G +V R+W +L + I+ L + AE F+
Sbjct: 271 TLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREWESGCSI 330
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK---- 352
+ AL+ YA +L K ++L + G W+ + H++ E+++
Sbjct: 331 YDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKNREMKQAVDC 390
Query: 353 -ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
A++I K+ P + M + + D+ E ++ + F++L
Sbjct: 391 VANAISTGRGDGQKWVPSPEIIGVFMQHFEQEKDVDGAEGFLEILKSTVEDLGVEVFESL 450
Query: 412 VQAYINAKTPAYGIRDRMRADNV 434
++ Y A + +R R++ +NV
Sbjct: 451 IRIYAAAGRTSPVMRRRLKMENV 473
>gi|293331503|ref|NP_001168643.1| uncharacterized protein LOC100382430 [Zea mays]
gi|223949857|gb|ACN29012.1| unknown [Zea mays]
gi|413933913|gb|AFW68464.1| hypothetical protein ZEAMMB73_255812 [Zea mays]
Length = 500
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 165/349 (47%), Gaps = 17/349 (4%)
Query: 16 AEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRG 75
A N L E+ + LR RR + +AL++SEW+ + F+ +D+A LDLI ++ G
Sbjct: 71 ARPRNLLRAVELQRIVKELRKRRRHRQALEVSEWMSLKGHVKFLPKDHAIHLDLIGQIHG 130
Query: 76 LQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQL 134
++ AE+Y + + + E Y LL NC V KA F MK+ GF ++ N L
Sbjct: 131 VEAAETYFNNLSDKDKTEKPYGALL-NCYTRELLVDKALAHFRNMKELGFVFSTLPYNDL 189
Query: 135 LILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG- 192
+ LY R+ + ++V V+ M+ + FSY+I I+ G D G++ +E M+ E
Sbjct: 190 MGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTRADFFGLENTLEEMECEPQ 249
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
I D +T A++A +Y+ G +EKA + L + E K+ R L+ LY LG +
Sbjct: 250 IVVDWNTYAVVASNYIKGDLREKAYSALSKAEAKLDKQDPDAYRHLISLYGNLGDKSEAK 309
Query: 253 RIWKLCESNPWLDVC--------MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
R+W + SN C M + KL+++ EAE + K + +
Sbjct: 310 RLWAVQMSN-----CKRYINRDYMNMLSVLVKLDEITEAEDLLKEWESSQNSFDFRVPNV 364
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
LL Y +L K + L+ + G +W + + E G+V KA
Sbjct: 365 LLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIGYAEKGDVAKA 413
>gi|242096944|ref|XP_002438962.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
gi|241917185|gb|EER90329.1| hypothetical protein SORBIDRAFT_10g029030 [Sorghum bicolor]
Length = 503
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 181/397 (45%), Gaps = 17/397 (4%)
Query: 16 AEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRG 75
A G L E+ + +LR R + +AL++SEW+ + F+ +D+A LDLI + G
Sbjct: 75 ARSGKRLRPCELHFVVKDLRRRHRHRQALEVSEWMNLKGHVKFLPKDHAVHLDLIGHIHG 134
Query: 76 LQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL 135
+ AE+Y + + + E Y LL V KA F +MK+ GF T + L+
Sbjct: 135 VGAAETYFNNLSDKDKTEKPYGALLYCYTRECLVDKALAHFQKMKELGFVFTPLPYSNLM 194
Query: 136 ILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMK-SEGI 193
ILY +++ ++V V+ M+ + FSY I I+ G D +G++ +E M+ + +
Sbjct: 195 ILYANVEQHERVPSVMAEMKSNGIVPNNFSYNICINAYGTRADFSGLENTLEEMEFASQV 254
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR 253
D T A +A HY+ G +EKA + L++ E ++ + L+ LY LG ++ R
Sbjct: 255 VVDWRTYADVASHYIKGDLREKAYSALQKAEAKMDEKDSFAYSHLISLYGHLGDKSEIKR 314
Query: 254 IWKL-------CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+W L C + + + + KL+++ EAE + K+ + + K LL
Sbjct: 315 LWVLQMLKCKGCINKGYKYMLTVLV----KLDEIAEAEDLLKKWESSKNEFDFKVPNILL 370
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ---- 362
K Y +L K + L+ G +W + + E G+V +A + +A
Sbjct: 371 KGYCQWGLLDKAEALLDGFLRKGKKPSATSWAIVASAYAEKGDVPRAYELTKRALSMCVP 430
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
+ + P S +I+ G++ E ++ V
Sbjct: 431 DSGWIPEPSMIEVILKYLGDEGEVKDVEAFIDLLKVV 467
>gi|297814019|ref|XP_002874893.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320730|gb|EFH51152.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 201/434 (46%), Gaps = 17/434 (3%)
Query: 11 TLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLI 70
T+ K+ EEG+ + + E+ + LR + Y AL++ EW+ + + DYA LDLI
Sbjct: 73 TIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVLQEDIKLQAGDYAVHLDLI 132
Query: 71 AKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFA 130
+K+RGL AE + + +P+ RG +LL + V KAE +F +M + GF +
Sbjct: 133 SKIRGLNSAEKFFEDLPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 192
Query: 131 CNQLLILYKRLDKKKVADVLLLMEKENVKLTQ--FSYKILIDIKGQSNDLTGMDQVVEAM 188
N +L ++ + K + V +L+++ +K + +Y + + ND+ G ++V
Sbjct: 193 YNHMLSMF--ISKGQFEKVSVLIKELKMKTSPDIVTYNLWLTAFASGNDVEGAEKVYLKA 250
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
K + PD T ++L Y EKA+ LKEME K++R L+ L+A LG
Sbjct: 251 KESKLNPDWVTYSVLTNLYAKTDNLEKAKLALKEMEKLVSKKNRVAYASLISLHANLGDK 310
Query: 249 DQVARIWKLCESN-------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
D V WK S+ +L + A + KL + E+A+ ++ +
Sbjct: 311 DGVNLTWKKVRSSFKKMNDAEYLSMISAVV----KLGEFEQAKGLYDEWESVSGTGDARI 366
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA- 360
+L Y + + G+ +++ E G + W+ L +++ ++EK KA
Sbjct: 367 PNLILAEYMNRDEILLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDLEKVLDCFEKAI 426
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
K+ + + ++G++ EK+ +++ G+V + + +L++ Y A
Sbjct: 427 DSVKKWTVNVRLVKAVCKELEEQGNVKGAEKLMTLLQKAGHV-NTQLYNSLLRTYAKAGE 485
Query: 421 PAYGIRDRMRADNV 434
A + +RM DNV
Sbjct: 486 MALIVEERMAKDNV 499
>gi|116309055|emb|CAH66166.1| H0107B07.5 [Oryza sativa Indica Group]
Length = 524
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 204/457 (44%), Gaps = 50/457 (10%)
Query: 26 EIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK 85
E+ + + LR + +Y AL+LSE + + ++ D A LDL+AK RG+ AE Y
Sbjct: 53 EVGVCVRRLRKQALYRPALKLSEVM-ARRGMNPTVSDQAIRLDLVAKSRGIAAAEKYFLD 111
Query: 86 IPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK- 143
+PE+ + + Y LL NC + +KAE + +MK+ F T+ N L+ LY ++++
Sbjct: 112 LPETSKTHLTYGALL-NCYCKDLMTEKAEALMGKMKELNFAFTAMCYNSLMTLYTKVNQH 170
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAI 202
+KV V+ M+ ++V ++Y + + D+ G+++V+E MK +G + PD +T +
Sbjct: 171 EKVPSVIQDMKADDVLPDIYTYNVWMRALAARVDIKGVERVIEEMKRDGRVTPDWTTYSN 230
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
LA YV G EKAEA LKE+E N + L+ LYA +V R+W+ + N
Sbjct: 231 LASIYVDAGLFEKAEAALKELEKWNTSNDLEAYQFLITLYARTQNLVEVHRVWRSLKRNQ 290
Query: 263 WLDVCMA---AIEAWGKLNKVEEAEAVFKRMSKTW------------------------- 294
M+ I+A L + AEA FK +
Sbjct: 291 PRRANMSYLNMIQALANLKDLPGAEACFKEWEAQYINPPKTNTKAPGTAETSSNESDVKA 350
Query: 295 ------------KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
K + A++K Y M + + K+ G + W+ ++
Sbjct: 351 TKDKGTDGELKHPKYDIRVANAMIKEYITEGMFDQAVAVKKRAKMRGGRLNAKTWEIFME 410
Query: 343 LHVEGGEVEK----ADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+++ G+++ AD + K + + P +MD + K D+ EK ++
Sbjct: 411 HYLKEGDLKMVHWCADRAIKKGHSAGRIWVPPHEVTETLMDYFEKNKDVDGAEKFVEVLK 470
Query: 398 QVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
+V F+ LV+ Y A G+R R++ +NV
Sbjct: 471 KVQKDLGTVVFEPLVRTYAAAGKKLPGMRHRLKIENV 507
>gi|255571041|ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534146|gb|EEF35862.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 200/429 (46%), Gaps = 18/429 (4%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLET-NKKLDFI 59
M+ P++ + L + ++G L++ E+ + LR + + +AL++ +W+ ++
Sbjct: 78 MEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALEVYDWMNNREERFRLS 137
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
D A LDL+AK+RG+ AE Y ++ ++ + VY LL + V +KAE + +M
Sbjct: 138 ASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYVKARMREKAESLIEKM 197
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
+ K + + N ++ LY L + D+++ M +N++L +SY I + +G +
Sbjct: 198 RKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIYSYNIWLSSRGSQGSI 257
Query: 179 TGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
M++V E MK + I P+ +T + +A Y+ G+ EKAE L+ +E R
Sbjct: 258 ERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRRVESRITGRDRIPYHY 317
Query: 238 LLPLYAELGKADQVARIWKLCES----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL LY +G +++ R+W + +S P L A I + +++ +E AE +++
Sbjct: 318 LLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGY-HAIISSLVRMDDIEGAEKIYEEWLPV 376
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ L+ Y L K + M E G W+ L H + +A
Sbjct: 377 KSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEVGGKPNSSTWEILADGHTREKRISEA 436
Query: 354 DSIL---LKAQQQNKFKP---MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
S AQ +KP + SS+ + ++ A D+ ST + + Q GY+ K
Sbjct: 437 LSCFKEAFLAQGSKSWKPKPVIISSFFKLCEEEA---DMASTGVLEDLLAQSGYLED-KT 492
Query: 408 FQTLVQAYI 416
+ +L+ + +
Sbjct: 493 YASLIGSSV 501
>gi|359490027|ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 191/429 (44%), Gaps = 9/429 (2%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
+ ++ EEG+ + + E+ + LR + Y AL++ EW+ + + DYA LDLIA
Sbjct: 189 IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIA 248
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
K+RGL AE + + + + +G+ LL V +KAE + +M + GF
Sbjct: 249 KIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPY 308
Query: 132 NQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
N ++ LY + + ++ K+N +Y + + + ND+ ++V+ +K
Sbjct: 309 NHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKA 368
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
I+PD T + L Y+ G +KA L EME ++ R L+ L+ + D V
Sbjct: 369 KIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGV 428
Query: 252 ARIWKLCES-----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
RIWK +S N CM I + KL + EEAE ++ + ++ LL
Sbjct: 429 HRIWKKLKSIFHKMNDAEYTCM--ISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILL 486
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA-QQQNK 365
Y + + + QM E G W+ L +++ ++EK KA K
Sbjct: 487 AAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKK 546
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
+ P + ++G+I EK+ +R+ G+V+ + + L++AY A +
Sbjct: 547 WNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVST-EIYNWLLRAYAKAGKMPLIV 605
Query: 426 RDRMRADNV 434
+ M+ D V
Sbjct: 606 AEWMKKDKV 614
>gi|357110627|ref|XP_003557118.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Brachypodium distachyon]
Length = 536
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 215/480 (44%), Gaps = 63/480 (13%)
Query: 26 EIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK 85
E+ + + LR + +Y AL+L+E + + ++ D A LDL+AK RG+ AE Y
Sbjct: 53 EVGVCVRRLRRQELYRPALKLTEVM-ARRGMNPTVGDQAIRLDLVAKSRGIAAAEKYFMD 111
Query: 86 IPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK- 143
+PE+ + + Y LL NC ++ +KAE + +MK+ F T+ + N L+ LY ++++
Sbjct: 112 LPETSKTHLTYGALL-NCYCKESMTEKAEALMEKMKELNFAFTAMSYNSLMTLYTKVNQP 170
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAI 202
+KV ++ M+ ++V ++Y + + D++G+++V+E MK +G + PD +T +
Sbjct: 171 EKVPSIIQDMKADDVLPDVYTYNVWMRSLAARQDISGVERVIEEMKRDGRVVPDWTTYSN 230
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
LA YV G EKAEA LKE+E N + L+ LY +V +W+ + N
Sbjct: 231 LASIYVEAGLFEKAEAALKELEKRNTSNDLEAYQFLITLYGRTQNLVEVHHVWRSLKRNN 290
Query: 263 WLDVCMA---AIEAWGKLNKVEEAEAVFK-------RMSKT------------------- 293
M+ I+ L + AEA FK R KT
Sbjct: 291 PRKANMSYLNMIQVLANLKDLPAAEACFKEWEARYIRPPKTKAIDAVTTETSKLDQESST 350
Query: 294 -----------------WKKLSTKH-------YTALLKVYADHKMLSKGKDLVKQMAESG 329
+++ KH AL+K Y ML K L K+ G
Sbjct: 351 TNASNNDSDAKGTEDKGMEEIDMKHPKYDIRVANALMKAYVTEGMLDKAVALKKRAKMRG 410
Query: 330 CHIGPLAWDALVKLHVEGGEVEKA----DSILLKAQQQNK-FKPMFSSYMLIMDQYAKRG 384
+ W+ ++ +++ G+++ A D + K + + P +M + K+
Sbjct: 411 GRLNSKTWEIFMEHYIKVGDLKNAHWCTDRAIKKGHSSGRIWVPPRDVTETLMGYFEKKK 470
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQV 444
D+ EK +++V F+ LV+ Y A G+R R++ +NV ++ +A V
Sbjct: 471 DVDGAEKFVEVLKKVQKDLGTVVFEPLVRTYAAAGKKFPGMRHRLKIENVEVSEEIAKLV 530
>gi|297737393|emb|CBI26594.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 191/429 (44%), Gaps = 9/429 (2%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
+ ++ EEG+ + + E+ + LR + Y AL++ EW+ + + DYA LDLIA
Sbjct: 76 IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIA 135
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
K+RGL AE + + + + +G+ LL V +KAE + +M + GF
Sbjct: 136 KIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPY 195
Query: 132 NQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
N ++ LY + + ++ K+N +Y + + + ND+ ++V+ +K
Sbjct: 196 NHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKA 255
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
I+PD T + L Y+ G +KA L EME ++ R L+ L+ + D V
Sbjct: 256 KIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGV 315
Query: 252 ARIWKLCES-----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
RIWK +S N CM I + KL + EEAE ++ + ++ LL
Sbjct: 316 HRIWKKLKSIFHKMNDAEYTCM--ISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILL 373
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA-QQQNK 365
Y + + + QM E G W+ L +++ ++EK KA K
Sbjct: 374 AAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKK 433
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
+ P + ++G+I EK+ +R+ G+V+ + + L++AY A +
Sbjct: 434 WNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVST-EIYNWLLRAYAKAGKMPLIV 492
Query: 426 RDRMRADNV 434
+ M+ D V
Sbjct: 493 AEWMKKDKV 501
>gi|449438486|ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
gi|449479168|ref|XP_004155524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 500
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 206/441 (46%), Gaps = 16/441 (3%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
AP IS+ L K+ +G + + E+ + ++ R + AL++S+W+ + L D
Sbjct: 47 APKISVVPVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDRRYLSLSPSD 106
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
A LDLI + GL+ AE+Y I + VY LL V +++KAE + M+
Sbjct: 107 AAVRLDLIHSVHGLEHAENYFNSISIRLKTSNVYGALLGCYVREKSLEKAEAIMQEMRKM 166
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G TSFA N L+ LY ++ + D+L+ M+ + + +S + L D++GM
Sbjct: 167 GIATTSFAYNVLINLYAQIGQHDKIDLLIEEMKTKGIPQDIYSIRNLCAAYVAKADISGM 226
Query: 182 DQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRWTCRLLL 239
+++++ ++ + ++ D + +I A Y++ G + +A +MLK+ E +++ + LL
Sbjct: 227 EKILKRIEEDSELKADWTIYSIAANGYLTAGLETEALSMLKKTEEKVRPNTNKFAFKFLL 286
Query: 240 PLYAELGKADQVARIWKLCESNPWL-DVCMA---AIEAWGKLNKVEEAEAVFKRMSKTWK 295
LY G ++V R+W + P + C+ I + KL+ +E AE +F+
Sbjct: 287 SLYERTGHKNEVYRVWNTFK--PLTKETCVPYALMITSLAKLDDIEGAERIFQEWESKCT 344
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ LL Y +L K + +V Q W L + E G + KA
Sbjct: 345 VYDFRVLNRLLVAYCRKGLLDKAESVVNQAVVERTPFRS-TWSILATGYAEYGHMSKAVE 403
Query: 356 ILLKA---QQQNKFKPMFSSYM-LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+L KA +QN +KP + +D K+GD + ++I + G V + + + L
Sbjct: 404 MLKKAILVGRQN-WKPKQGDILEACLDYLEKQGDAETMDEIVRLCKSSGTVMK-EMYYRL 461
Query: 412 VQAYINAKTPAYGIRDRMRAD 432
++ I P I ++M+ D
Sbjct: 462 LRTSIAGGKPVISILEQMKMD 482
>gi|255559466|ref|XP_002520753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540138|gb|EEF41715.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 204/456 (44%), Gaps = 23/456 (5%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
+ K+ EG+ + + ++ + LR + Y AL++ EW+ ++L + DYA LDL+A
Sbjct: 56 IRKWKTEGHKVQKYQLNRIVRELRKMKRYKHALEVCEWMTQERELKLLPGDYAVHLDLVA 115
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
K+RGL AE + + +P+ RG LL V +V KAE + +M+D F
Sbjct: 116 KVRGLTSAEKFFEDLPDEMRGWQTCTALLHTYVKCKDVVKAEALMEKMRDCSFVKNPLPY 175
Query: 132 NQLLILY---KRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
N ++ LY DK K++ + L K++ ++ + + + ND+ +V+
Sbjct: 176 NHMISLYIADGEFDKAKRIVEEL----KKSTTPDVVTFNLWLSMCASLNDVESAKKVLLE 231
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
+K IE D T + L Y+ E A + LKEME +++R LL LY +G
Sbjct: 232 LKKLKIEADWITYSTLTNLYLKNKLLEDAVSTLKEMEKRASRKNRLAYSSLLSLYTNMGD 291
Query: 248 ADQVARIWK-----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
D V RIW C+ N CM + + KL ++E+AE ++ +
Sbjct: 292 KDAVHRIWNKMKSLFCKMNDAEYTCM--LSSLIKLEEIEKAENLYTEWESVSGTGDPQVA 349
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA-- 360
LL Y + + ++ ++M E G W+ L H++ ++EK KA
Sbjct: 350 NILLAAYINRNQIEDSENFYRRMVEKGVCPCYTTWELLTWGHLKTKQMEKVLDCFKKAIT 409
Query: 361 --QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ + K + I+++ +G+ E+ +R GYV+ + + +L++ Y A
Sbjct: 410 IVKTWSPDKRLVREVFKILEE---KGNAEGAEEFLVMLRNAGYVST-EIYNSLLRTYAKA 465
Query: 419 KTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTA 454
+ +RM+ D V ++ + + R+T
Sbjct: 466 GKMPLIVTERMKKDGVELDEETHRLIKTTSSMRETG 501
>gi|218195308|gb|EEC77735.1| hypothetical protein OsI_16848 [Oryza sativa Indica Group]
Length = 1300
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 179/403 (44%), Gaps = 23/403 (5%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL-ETNKKLDFIERDYASC 66
+ TL + E L + E+ LR R + ALQ+ +W+ E + D A
Sbjct: 91 VGRTLGAWDEGERRLDKWELCRIARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQ 150
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLIAK+RG+ AE Y +++P+ + + Y +LL +K E F +M+ KGF
Sbjct: 151 LDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQAMMKEKTESTFEQMRKKGFAT 210
Query: 127 TSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+ N L+ Y ++ + +L+ +ME+ NV +Y I I D M+QV
Sbjct: 211 DTLPFNVLMNFYVDAEEAEKVSILIDEMMER-NVAFDVCTYNIWIKSCAAMQDADAMEQV 269
Query: 185 VEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
M + E + + +T LA ++ G EKAE LKE E + L+ LY+
Sbjct: 270 FNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEAEKRTTGREKKCFHYLMTLYS 329
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWG---------KLNKVEEAEAVFKRMSKTW 294
LGK ++V R+W W I G +L +E AE +++ +
Sbjct: 330 HLGKKEEVYRVWN------WYKATFPTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKS 383
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K LL YA ++K + + + E G + P W+ L +++ G+ +A
Sbjct: 384 SSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKPNTWEILGTAYLKDGQSSEAL 443
Query: 355 SILLKAQ---QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
S L KA +K++P ++ ++ + ++ D S +++ +
Sbjct: 444 SCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESADRLMN 486
>gi|242039187|ref|XP_002466988.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
gi|241920842|gb|EER93986.1| hypothetical protein SORBIDRAFT_01g017960 [Sorghum bicolor]
Length = 510
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 207/442 (46%), Gaps = 17/442 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P I + L ++ +EG+ + + I + L R + AL+LS W+ + L D
Sbjct: 55 PSIPLSPVLKQWDQEGHTVKKFVIQAIVKKLVGLRRFAHALELSFWMTDRRHLHLTAGDV 114
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI+K+ GL+KA Y +P+ R Y +LL V V KAEE F +M++ G
Sbjct: 115 AYRLDLISKVHGLEKAVEYFGMVPKRLRMPQCYGSLLKCYVEAKAVDKAEEHFAKMQEMG 174
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+S+ ++ LY + ++V + ME++ VK FS + ++ + D+ G+
Sbjct: 175 MK-SSYTYTSMMKLYLETGQLERVHAMFQDMEEKGVKPDTFSVESMLAAYIAAEDVEGVG 233
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRWTCRLLLPL 241
+V++ QA+ A ++ G + +A L E E + K R LL
Sbjct: 234 KVLDKANPHEKLVKWHGQALAASLFMKSGMQVRAVMALLEAERRISPKSSRIAYAFLLKT 293
Query: 242 YAELGKADQVARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
Y +LG +V RIW + +S P + ++ I A K+N ++ AEA K W+ +S
Sbjct: 294 YTDLGMYPEVGRIWSVYKSKVPPSNTMYLSRISALLKMNDIDGAEATLKE----WETVSL 349
Query: 300 KHY-----TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+++ ++ Y ++ K LV + G W L + GEV KA
Sbjct: 350 RYHDFRLINLMVDAYCREGLVEKAVALVDDAIKKGRTPYANTWYKLAGGFFKTGEVSKAV 409
Query: 355 SILLKAQQQ--NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+ KA + +KP ++ ++ ++ + + D+ + E+I ++++G + + + + L+
Sbjct: 410 DMTRKALESATPPWKPDLTNVLMSLEHFMNQKDVEAAEEIASMLQKLGPLTK-EVYHCLL 468
Query: 413 QAYINAKTPAYGIRDRMRADNV 434
+ Y+ A P + +RM+ D +
Sbjct: 469 KTYVRAGKPVSDLLERMKKDGL 490
>gi|326493098|dbj|BAJ85010.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510377|dbj|BAJ87405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 189/423 (44%), Gaps = 22/423 (5%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNK-KLDFIERDYASC 66
+ TL + E L + E+ LR R + AL++ +W+ + + D A
Sbjct: 83 VGRTLADWDEGERRLDKWELCRIARELRKFRRFNLALEVYDWMTDRRDRFSLSSSDMAIQ 142
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLIAK+RG+ AE Y +K+P+ + + Y +LL +K E F +M+ KGF
Sbjct: 143 LDLIAKVRGVPDAEEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFAT 202
Query: 127 TSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N L+ Y + + +KV+ V M++ N+ +Y I I D M++V+
Sbjct: 203 DTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVL 262
Query: 186 EAMKS-EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
M + E + + +T LA ++ EKAE LKE E + L+ LY+
Sbjct: 263 NQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEKRATGRDKKCFHFLITLYSH 322
Query: 245 LGKADQVARIWKLCESNPWLDVCMAAIEAWG---------KLNKVEEAEAVFKRMSKTWK 295
L K ++V RIW W I G +L +E AE +++ +
Sbjct: 323 LQKKEEVYRIWN------WYKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSS 376
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K LL Y+ + K + + + E G + P W+ L +++ ++ +A S
Sbjct: 377 SFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWEILATAYLKDNQLSEALS 436
Query: 356 ILLKA---QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L KA + +K++P ++ ++ + ++ D S +++ +R G A +++++L+
Sbjct: 437 CLEKATAVKSASKWRPRPTNVETLLAYFKEKNDTESVDRLMSVLRSRG-CAENEEYKSLI 495
Query: 413 QAY 415
Y
Sbjct: 496 DTY 498
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 191/429 (44%), Gaps = 9/429 (2%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
+ ++ EEG+ + + E+ + LR + Y AL++ EW+ + + DYA LDLIA
Sbjct: 76 IQRWREEGHTVRKYELNRIVRELRKLKRYKHALEICEWMTKQHDIKLLAGDYAVHLDLIA 135
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
K+RGL AE + + + + +G+ LL V +KAE + +M + GF
Sbjct: 136 KIRGLASAEKFFEDLSDKMKGQPTCTALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPY 195
Query: 132 NQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
N ++ LY + + ++ K+N +Y + + + ND+ ++V+ +K
Sbjct: 196 NHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKA 255
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
I+PD T + L Y+ G +KA L EME ++ R L+ L+ + D V
Sbjct: 256 KIDPDWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGV 315
Query: 252 ARIWKLCES-----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
RIWK +S N CM I + KL + EEAE ++ + ++ LL
Sbjct: 316 HRIWKKLKSIFHKMNDAEYTCM--ISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILL 373
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA-QQQNK 365
Y + + + QM E G W+ L +++ ++EK KA K
Sbjct: 374 AAYINKNEMEMAEKFYNQMVERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKK 433
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
+ P + ++G+I EK+ +R+ G+V+ + + L++AY A +
Sbjct: 434 WNPDEKLVREVYKNLEEQGNIEGAEKVLVILRKAGHVST-EIYNWLLRAYAKAGKMPLIV 492
Query: 426 RDRMRADNV 434
+ M+ D V
Sbjct: 493 AEWMKKDKV 501
>gi|8778536|gb|AAF79544.1|AC022464_2 F22G5.3 [Arabidopsis thaliana]
Length = 555
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 200/436 (45%), Gaps = 25/436 (5%)
Query: 22 LSRAEIALAMANL-----RTRRMYGKAL-QLSEWLETNKKLDFIERDYASCLDLIAKLRG 75
L R + AL M+NL R + K L L EW+ + E +Y+ L+ KL G
Sbjct: 110 LGRNKRALEMSNLGMLLDRNEFLLMKILLNLMEWIIRERPYRLGELEYSYLLEFTVKLHG 169
Query: 76 LQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL 135
+ + E ++P+ F+ E++Y L+ C+ ++ A E +M++ G+ + N+L+
Sbjct: 170 VSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVIRLALEYMKKMRELGYRTSHLVYNRLI 229
Query: 136 ILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE 194
I ++K +A L LM+ + +Y IL+ ++ +++ G+ + + MK G+E
Sbjct: 230 IRNSAPGRRKLIAKDLALMKADKATPHVSTYHILMKLEANEHNIDGVLKAFDGMKKAGVE 289
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEME----GDNLKEHRW-TCRLLLPLYAELGKAD 249
P+ + ILA + AEA +E+E GDN W T +L+ LY LGK
Sbjct: 290 PNEVSYCILAMAHAVARLYTVAEAYTEEIEKSITGDN-----WSTLDILMILYGRLGKEK 344
Query: 250 QVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
++AR W + + + A EA+ ++ ++ AE ++ M T+ + +LL
Sbjct: 345 ELARTWNVIRGFHHVRSKSYLLATEAFARVGNLDRAEELWLEMKNVKGLKETEQFNSLLS 404
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL------VKLHVEGGEVEKADSILLKAQ 361
VY ++ K + ++M +G + + L KL E + + L ++
Sbjct: 405 VYCKDGLIEKAIGVFREMTGNGFKPNSITYRHLALGCAKAKLMKEALKNIEMGLNLKTSK 464
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
P + + I++ +A++GD+ ++EK+F ++ Y + L +AY+ AK
Sbjct: 465 SIGSSTPWLETTLSIIECFAEKGDVENSEKLFEEVKNAKYNRYAFVYNALFKAYVKAKVY 524
Query: 422 AYGIRDRMRADNVFPN 437
+ RM P+
Sbjct: 525 DPNLFKRMVLGGARPD 540
>gi|357446577|ref|XP_003593564.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482612|gb|AES63815.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 495
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 210/439 (47%), Gaps = 15/439 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ L + +GN +S E+ + +LR R + +ALQ+SEW+ F ++A
Sbjct: 43 SVAPQLDDWVYKGNKVSVGELQRIVRDLRKRSRFTQALQVSEWMNKIGVCIFSPVEHAVH 102
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDL ++ G AE+Y + + R E + LL V V K+ +MK+ GF +
Sbjct: 103 LDLTGRVHGFYAAETYFNSLKDIERNEKTHGALLNCYVRQRQVDKSLSHLKKMKELGFAL 162
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+S N ++ LY + + +KV+DV M++ +V FSY+I I G +D+ GM+ ++
Sbjct: 163 SSLTYNNIMCLYTNIGQHEKVSDVFNEMKENHVLPDNFSYRICIGSYGVRSDIDGMNAIL 222
Query: 186 EAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
+ M+S+ I D +T +++A Y+ +A L++ E + L+ LYA
Sbjct: 223 KEMESQPHIVMDWNTYSVVANFYIKAELSSEAIDALRKCEKRLDDKDGEGYNHLISLYAR 282
Query: 245 LGKADQVARIWKL----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
LGK ++V R+W + C+ D + +E+ KL + +EA+ + K +
Sbjct: 283 LGKKNEVLRLWDMEKSACKRCLNRDF-ITMLESLVKLEEFDEADKILKEWEFSGNCYDYG 341
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
++ Y++ K + +++ + + + +W + ++ GE+EKA L A
Sbjct: 342 VPNVVVVGYSEKDFPEKAEAILQDIWKKRKYTDTSSWILVADRYLLKGEMEKALECLKTA 401
Query: 361 ----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ-FQTLVQAY 415
+ K KP ++ +I Y+ GD S E +R + + + + +L++AY
Sbjct: 402 VCLYPENKKRKP---NHRVISSIYSWIGDNASVEDAEALVRLLKKFQKNRHMYHSLLKAY 458
Query: 416 INAKTPAYGIRDRMRADNV 434
+ A G+ DRM+ DN+
Sbjct: 459 VRADKEVDGVLDRMKEDNI 477
>gi|302143278|emb|CBI21839.3| unnamed protein product [Vitis vinifera]
Length = 501
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 174/363 (47%), Gaps = 9/363 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P SI L ++ EEG +S+ ++ + ++ R + AL++S+W+ + D
Sbjct: 34 PKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDRRYFTLTPSDA 93
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI+ + G +AESY IP + + Y LL+ V +V+KAE +M++
Sbjct: 94 AIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAEATMQKMREMD 153
Query: 124 FPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F +SF N L+ LY + + K+ ++ M+ + + F+ + L+ ++D++ M+
Sbjct: 154 FATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAYVAASDISAME 213
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC-RLLLP 240
+ + M+ + I D + ++ A Y+ G +KA MLK++E + R + + LL
Sbjct: 214 KFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHLERLSAFKFLLS 273
Query: 241 LYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
LYA G ++ R+W L + + P CM I KL+ +E AE +F+
Sbjct: 274 LYARTGHKQELYRVWNLYKPSYEYPEAYSCM--ITCLTKLDDIEGAEKIFQEWECECTMY 331
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ LL Y + K + LV ++ E W+ L K +VE ++ KA +L
Sbjct: 332 DFRVLNRLLSAYCKRCLFDKAESLVNKVIEERMPYAS-TWNILAKGYVEDKQMPKAVEML 390
Query: 358 LKA 360
KA
Sbjct: 391 KKA 393
>gi|359485373|ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 461
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 174/363 (47%), Gaps = 9/363 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P SI L ++ EEG +S+ ++ + ++ R + AL++S+W+ + D
Sbjct: 34 PKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDRRYFTLTPSDA 93
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI+ + G +AESY IP + + Y LL+ V +V+KAE +M++
Sbjct: 94 AIRLDLISMVHGRVQAESYFNNIPNNLKTSSAYGALLSGYVREKSVEKAEATMQKMREMD 153
Query: 124 FPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F +SF N L+ LY + + K+ ++ M+ + + F+ + L+ ++D++ M+
Sbjct: 154 FATSSFPYNMLINLYSQTGNHGKIEALIQEMQSKAIPCDAFTVRNLMVAYVAASDISAME 213
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC-RLLLP 240
+ + M+ + I D + ++ A Y+ G +KA MLK++E + R + + LL
Sbjct: 214 KFLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHLERLSAFKFLLS 273
Query: 241 LYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
LYA G ++ R+W L + + P CM I KL+ +E AE +F+
Sbjct: 274 LYARTGHKQELYRVWNLYKPSYEYPEAYSCM--ITCLTKLDDIEGAEKIFQEWECECTMY 331
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ LL Y + K + LV ++ E W+ L K +VE ++ KA +L
Sbjct: 332 DFRVLNRLLSAYCKRCLFDKAESLVNKVIEERMPYAS-TWNILAKGYVEDKQMPKAVEML 390
Query: 358 LKA 360
KA
Sbjct: 391 KKA 393
>gi|356536769|ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Glycine max]
Length = 516
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 192/442 (43%), Gaps = 18/442 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRA-EIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
P S + K+ EEG++ R ++ + LR + Y AL++ EW+ K + ++ D
Sbjct: 56 PKRSAVVAINKWKEEGHEPPRKYQLNRIVRELRKDKRYKHALEVCEWMTLQKDMKLVQGD 115
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
YA LDLI K+RGL AE + + +P+ RG+ LL V N V KAE + +M +
Sbjct: 116 YAVHLDLITKVRGLNSAEKFFEDLPDRMRGKQTCSALLHAYVQNNLVDKAEALMLKMSEC 175
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ N ++ LY K + ++ K N ++ + + ND+ +
Sbjct: 176 DLLINPLPYNHMISLYISNGKLEKVPKIIQELKMNTSPDIVTFNLWLAACASQNDVETAE 235
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V+ +K I+PD T + L Y+ EKA A +KEME ++ R LL L+
Sbjct: 236 RVLLELKKAKIDPDWVTYSTLTNLYIKNASLEKAGATVKEMENRTSRKTRVAYSSLLSLH 295
Query: 243 AELGKADQVARIWKLCES-----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+G D V RIW+ ++ N +CM I + KL AE +++
Sbjct: 296 TNMGNKDDVNRIWEKMKASFRKMNDNEYICM--ISSLLKLGDFAGAEDLYREWESVSGTN 353
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ LL Y + + +D Q+ + G W+ +++ +VEK
Sbjct: 354 DVRVSNILLGSYINQDQMEMAEDFCNQIVQKGVIPCYTTWELFTWGYLKRKDVEKFLDYF 413
Query: 358 LKA-QQQNKFKP----MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
KA K+ P + ++ +I +Q +G E++ +R G+V + +
Sbjct: 414 SKAISSVTKWSPDQRLVQEAFKIIEEQAHTKG----AEQLLVILRNAGHV-NTNIYNLFL 468
Query: 413 QAYINAKTPAYGIRDRMRADNV 434
+ Y A + +RMR DNV
Sbjct: 469 KTYATAGKMPMIVAERMRKDNV 490
>gi|326498623|dbj|BAK02297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 188/423 (44%), Gaps = 22/423 (5%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNK-KLDFIERDYASC 66
+ TL + E L + E+ LR R + AL++ +W+ + + D A
Sbjct: 83 VGRTLADWDEGERRLDKWELCRIARELRKFRRFNLALEVYDWMTDRRDRFSLSSSDMAIQ 142
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLIAK+RG+ E Y +K+P+ + + Y +LL +K E F +M+ KGF
Sbjct: 143 LDLIAKVRGVPDTEEYFEKLPDPLKDKRTYGSLLNVYAQARMKEKTEYTFEQMRKKGFAT 202
Query: 127 TSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N L+ Y + + +KV+ V M++ N+ +Y I I D M++V+
Sbjct: 203 DTLPFNVLMNFYVDVAEPEKVSTVTDEMKQRNISFDVCTYNIWIKCCAAMKDADAMERVL 262
Query: 186 EAMKS-EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
M + E + + +T LA ++ EKAE LKE E + L+ LY+
Sbjct: 263 NQMTADESVVANWTTYTTLASMHIKLENFEKAEECLKEAEKRATGRDKKCFHFLITLYSH 322
Query: 245 LGKADQVARIWKLCESNPWLDVCMAAIEAWG---------KLNKVEEAEAVFKRMSKTWK 295
L K ++V RIW W I G +L +E AE +++ +
Sbjct: 323 LQKKEEVYRIWN------WYKATFKTIHNLGYQEVLSALVRLGDIEGAELLYEEWASKSS 376
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K LL Y+ + K + + + E G + P W+ L +++ ++ +A S
Sbjct: 377 SFDPKTMNILLAWYSREGFVVKAQQTLNRFVEKGGNPKPNTWEILATAYLKDNQLSEALS 436
Query: 356 ILLKA---QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L KA + +K++P ++ ++ + ++ D S +++ +R G A +++++L+
Sbjct: 437 CLEKATAVKSASKWRPRPTNVETLLAYFKEKNDTESVDRLMSVLRSRG-CAENEEYKSLI 495
Query: 413 QAY 415
Y
Sbjct: 496 DTY 498
>gi|326505170|dbj|BAK02972.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 202/441 (45%), Gaps = 16/441 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S L ++AEEG + + ++ + LR R + AL++ EW+ T ++ + D+
Sbjct: 50 PKRSAVVVLRRWAEEGRAVHKYQLNRVVRELRKYRRFKHALEICEWMRTQPEIRLLPGDH 109
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDL+AK+RGL AE + + +PE +G +LL V KAE + M D G
Sbjct: 110 AVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNSLLHAYVQHGARDKAEAMLKEMADAG 169
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ + N ++ LY + + +KV +++ + + + +Y I + + N + +
Sbjct: 170 YLTCALPFNHMMSLYMSVGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSRKNSVKSAE 228
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V + MK + + PD T ++LA Y++ G K L EME ++ R LL +Y
Sbjct: 229 KVFDLMKDDRVVPDWMTFSLLASIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTMY 288
Query: 243 AELGKADQVARIW-KLCES-NPWLDV---CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
A L + R+W K+ ++ + D CM + + + + AE V+
Sbjct: 289 ASLSDRGNLDRVWSKMRQTFRKFSDAEYKCM--LTSLTRFGDIAAAEFVYGEWESQSGTK 346
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
++ +L Y + + K + ++ + + G W+ V ++ G E+ D ++
Sbjct: 347 DSRIPNTILSFYIKNGEMEKAESFLQYIVQKGVKPSYSTWELFVWGYL--GNDERTDKVM 404
Query: 358 --LKAQQQN--KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
LK + K++P + Q K+GDI + E++ +R GYV + + +++
Sbjct: 405 ECLKKALSSLEKWEPNPQLVAALFSQIEKKGDIEAAEELLVVLRGAGYVTT-EIYNLVLR 463
Query: 414 AYINAKTPAYGIRDRMRADNV 434
Y A+ I +RM D V
Sbjct: 464 TYAKAEMMPLIIDERMDQDKV 484
>gi|242066836|ref|XP_002454707.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
gi|241934538|gb|EES07683.1| hypothetical protein SORBIDRAFT_04g035970 [Sorghum bicolor]
Length = 527
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 199/444 (44%), Gaps = 23/444 (5%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
+ ++A E +S+ E+ A+A LR R Y AL++ W+E+ + D+A+ LDLIA
Sbjct: 76 IDRWARESVHISQPELRRAIAMLRRARRYEHALEIFSWMESCNSVLLSSWDHAARLDLIA 135
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
K G +AE Y K+ + LL V NV+KAE +++ G PV +
Sbjct: 136 KAYGTSQAEEYYNKLQSPAARQAASFPLLHCYVTERNVQKAETFMAQLQSCGLPVDPHSF 195
Query: 132 NQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM-K 189
N+++ LY +K V+ LM++ N+ SY + +++ + + + + V + M
Sbjct: 196 NEIMKLYIATFQYEKALSVIDLMKRNNIPRNVLSYNLWMNVCAEVSGVAPVQSVFQEMLN 255
Query: 190 SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD 249
E +E ST LA + G KA+A L++ E R ++ YA L +D
Sbjct: 256 DETVEVGWSTYCTLANIFRKNGLNTKAQACLRKAETKLSPTGRLGYSFVMTCYAALNDSD 315
Query: 250 QVARIWKLCESNP-------WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
V R+W+ +S P ++ + +I K+ + +AE +F +K +
Sbjct: 316 GVMRLWEASKSVPGRIPAANYMTAMLCSI----KVGDISQAEWIFGSWEAGCRKHDVRVS 371
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL---LK 359
LL Y ++ + K + L M E G W+ L++ +V+ +++KA + L
Sbjct: 372 NVLLGAYVRNRWIEKAERLHLHMLEKGARPNYKTWEILMEGYVQSRQMDKAVGCMKKGLS 431
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRG---DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ ++P I + ++G D + K+ R + +++L++AYI
Sbjct: 432 LLKSCHWRPPLELMEAIGKHFEEQGSADDAYRYIKVLQRFN----LTSLPLYKSLIRAYI 487
Query: 417 NAKTPAYGIRDRMRADNVFPNKAL 440
NA I + + D + ++ +
Sbjct: 488 NADIVPPNILEMIAKDQIVTDEEM 511
>gi|449458295|ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 212/444 (47%), Gaps = 25/444 (5%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ T+ ++ EGN + + E+ + LR R Y LQ+ EW+ET +K+++ DYA
Sbjct: 24 SVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEWMET-RKINYSFTDYALR 82
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDKGFP 125
LDLI+K+ G+ AE Y +P S + Y LL NC + +KA +F +M D+
Sbjct: 83 LDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALL-NCYCKEMMEEKALTLFKKM-DELKI 140
Query: 126 VTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
TS + N L+ +Y R+D +KV ++ M++ LT F+Y + ++ ND+ ++++
Sbjct: 141 STSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCASLNDIGKVEEI 200
Query: 185 VEAMKSEGIEP-DSSTQAILAKHYVSGGRKEKAEAMLKEMEGD--NLKEHRWTCRLLLPL 241
+E MK E D +T + LA YV G+ EKAE LK++E + + K R L+ L
Sbjct: 201 LEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSDKNDRLVYHCLISL 260
Query: 242 YAELGKADQVARIWKLCES--NPWLDVC-MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
YA +V RIW +S + ++ + ++A KL +E + +K +
Sbjct: 261 YASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYKEWESNCRNFD 320
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL--AWDALVKLHVEGGEVEKADSI 356
+ ++ Y M + + + GP A + + ++ +V+ A S
Sbjct: 321 LRIVNDIIGAYLQQDMYEDAAMIFEDATKRS--KGPFSRAREMFMVYFLKLKQVDSAFSH 378
Query: 357 L---LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE---KIFHRMRQVGYVARFKQFQT 410
L L ++ ++ P ++ ++ + + D+ E +I R++ + +
Sbjct: 379 LESALSESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCLDASG----YHL 434
Query: 411 LVQAYINAKTPAYGIRDRMRADNV 434
L++ Y+ A A +R R++ D++
Sbjct: 435 LLKTYVAAGKLAPDMRKRLKEDDI 458
>gi|293336604|ref|NP_001168600.1| uncharacterized protein LOC100382384 [Zea mays]
gi|223949449|gb|ACN28808.1| unknown [Zea mays]
Length = 536
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 205/468 (43%), Gaps = 60/468 (12%)
Query: 26 EIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK 85
E+ + + +R +Y +L+LSE + + ++ D A LDLIAK RG+ AE Y
Sbjct: 53 EVGVCVRRMRRNALYRPSLKLSEVM-ARRGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLD 111
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+PE+ + + Y LL + +KAE + +MK+ F T+ + N L+ +Y ++++ +
Sbjct: 112 LPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAE 171
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV ++ M+ ++V F+Y + + D+ G+++V+E MK +G + PD +T + L
Sbjct: 172 KVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNL 231
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNP 262
A YV G EKAEA LKE+E N + L+ LY +V R+W+ L NP
Sbjct: 232 ASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNP 291
Query: 263 WLD--VCMAAIEAWGKLNKVEEAEAVFKRM------------------------------ 290
+ + I+ L + AEA FK
Sbjct: 292 RMANMSYLNMIQVLANLKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSN 351
Query: 291 ------------SKTWKKLSTKH-------YTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+T + L KH A++K Y ML K + K+ G
Sbjct: 352 PPNNQSGTKETGDETAEDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGR 411
Query: 332 IGPLAWDALVKLHVEGGEVEK----ADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDI 386
+ W+ ++ +++ G+++ AD + K + + P + +M + + D+
Sbjct: 412 LNAKTWEIFMEHYLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDV 471
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
E+ +++V F+ LV+ Y A G+R R++ +NV
Sbjct: 472 DGAERYVGALKKVQKDLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENV 519
>gi|224121672|ref|XP_002330624.1| predicted protein [Populus trichocarpa]
gi|222872228|gb|EEF09359.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 194/402 (48%), Gaps = 17/402 (4%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
++ P + + + K+ +EG ++ +++ + LR + ALQ+S+W+ + +
Sbjct: 42 VEDPMVPVIPVIEKWVQEGQVVTNSDLKHFIRKLRKIHRFSHALQISQWMSDQRGHNLSP 101
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAG-NNVKKAEEVFNRM 119
D A LDLI+K+ GL++A +Y +PES RG VY LL NC A ++++AE +M
Sbjct: 102 GDVAVRLDLISKVHGLEQAVTYFNSVPESLRGLEVYGALL-NCYAHYKHLEEAEATMRKM 160
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
++ GF + N +L LY ++ K + VL+ MEK + + +YKIL++ ++++
Sbjct: 161 REMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQEMEKWGICFSNITYKILLNAYVATSNI 220
Query: 179 TGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCR 236
+ +++ M+++ + D + A Y+ G +K ML E + K R+ C
Sbjct: 221 EEIKKILMKMEADPLVSIDWYAYVVAANGYLKAGLIDKTLTMLWRSEQLISGKSARFACE 280
Query: 237 LLLPLYAELGKADQVARIWKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
LL LY +G +QV R+W L ++ + +L CM I + KL+ V+ AE +++
Sbjct: 281 TLLSLYTAVGNKEQVYRVWNLYKTKGRSLNSSYL--CM--INSLLKLDDVDGAERIWEEW 336
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
K + ++ Y+ + K + V ++ SG I D L + G++
Sbjct: 337 VSIVKFFDIRIPNVMVSAYSKKGLWEKAEAFVGKIVASGIKIEASTLDRLATGYHVRGQM 396
Query: 351 EKADSILLKA--QQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
KA + KA Q +KP + ++ R D+ E
Sbjct: 397 LKASETIKKAISISQPGWKPNVYTLAACLEYLKGREDVKKIE 438
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
L+V A + + +EEAEA ++M + + Y +L +Y K + L++
Sbjct: 134 LEVYGALLNCYAHYKHLEEAEATMRKMREMGFVRNVLSYNVMLNLYYQMGKYEKIQVLMQ 193
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
+M + G + + L+ +V +E+ IL+K + + +Y++ + Y K
Sbjct: 194 EMEKWGICFSNITYKILLNAYVATSNIEEIKKILMKMEADPLVSIDWYAYVVAANGYLKA 253
Query: 384 GDIHSTEKIFHRMRQV--GYVARFKQFQTLVQAY 415
G I T + R Q+ G ARF +TL+ Y
Sbjct: 254 GLIDKTLTMLWRSEQLISGKSARF-ACETLLSLY 286
>gi|388517969|gb|AFK47046.1| unknown [Lotus japonicus]
Length = 496
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 210/444 (47%), Gaps = 10/444 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P + L ++ E G D+++ ++ + L R + ALQ+SEW+ + D
Sbjct: 46 PRTPMAPILNQWVEGGGDITQIQLQRLITRLAYFRRFTHALQVSEWMSNERNYDLSSGLI 105
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A + LI+K+ GL+KAE + Q IP+ RG +Y +LL+ ++++AE + ++K+
Sbjct: 106 AKRIHLISKVHGLKKAEDFFQGIPDDKRGFKIYASLLSCYAEHKSLEEAEAIMKKIKELR 165
Query: 124 FPVTSFAC-NQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
P+ C N LL LY + K + D L+ KEN ++ I ++ + D+ GM+
Sbjct: 166 -PMHLTVCYNILLKLYAQKGKYEKLDRLMQEMKENDLCNGATFTIRLNAYVAAKDVEGME 224
Query: 183 QVVEAMKSEGIEP-DSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRWTCRLLLP 240
+++ M+++ + D T + A Y+ G EKA A LK+ E K+ R L
Sbjct: 225 KLLMQMEADPMATVDWYTYSTAANGYLKAGNVEKALAALKKSEQSVKGKKLRLAYESLQS 284
Query: 241 LYAELGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
YA +G D+V R+W ++ N W + + + KL+ + AE + K
Sbjct: 285 TYAAIGNKDEVYRLWNRIKNLQNCWNSSYICMLSSLLKLDDFDGAEKILAEWESEHKNFD 344
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T+ ++ Y +L K + ++++ +SG + +WD + + ++EKA +
Sbjct: 345 TRIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMK 404
Query: 359 KAQQQNK--FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
KA N+ ++P S+ + + ++ D+ S +I ++ G++ + + LV +Y
Sbjct: 405 KAILANRPGWRPSPSTLVACITYLKEKLDLESALEILKLCKEDGHI-KITTYDGLV-SYA 462
Query: 417 NAKTPAYGIRDRMRADNVFPNKAL 440
+ + P D M+ D K L
Sbjct: 463 HGEIPDKEALDLMKRDYQMDGKKL 486
>gi|357137419|ref|XP_003570298.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Brachypodium distachyon]
Length = 513
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 205/442 (46%), Gaps = 19/442 (4%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
++ + + ++A+E +SR ++ A++ LR R Y AL++ W+++ K L+ D+A+
Sbjct: 57 AVAAAIERWAQERGHVSRPDLRRAVSQLRRARRYDHALEILSWMDSRKDLNLSPLDHAAR 116
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
LDLIAK+ G AE Y +K+ + E LL VA NV+KAE ++ G PV
Sbjct: 117 LDLIAKVHGTCHAEEYYKKLRNAACREAASFPLLHCYVAERNVQKAESFMASLQSIGLPV 176
Query: 127 TSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N++L LY +K V+ LM++ N+ SY + ++ + + V
Sbjct: 177 DPHSFNEMLKLYVATCQFEKALAVIDLMKRSNIPRNVLSYNLWMN-ACSVLGVASVQSVF 235
Query: 186 EAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
+ M ++G +E ST LA ++ G KA A L+ E R ++ YA
Sbjct: 236 KEMVNDGTVEVGWSTFCTLANIFIKHGLNSKALACLRTAETKLSPRQRLGYSFVMTCYAR 295
Query: 245 LGKADQVARIWKLCESNP-------WLDVCMAAIEAWGKLNKVEEAEAVFKRM-SKTWKK 296
L +D V R+W+ +S P ++ + +I K+ + +AE +F ++ +K
Sbjct: 296 LDDSDGVMRLWEASKSVPGRIPSANYMSTIICSI----KVGDIAQAEWIFGSWEAECGRK 351
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ LL Y + + K + L M E G H W+ L++ V+ +++KA +
Sbjct: 352 NDVRVSNVLLGAYVRNGWIEKAERLHLHMLEKGAHPNYKTWEILLEGFVQSRQMDKAVNA 411
Query: 357 LLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ KA +K ++P I + + G++ + +++ + ++++++
Sbjct: 412 IKKALSLSKSCHWRPPLELVEAIATFFEEHGNVDDANRYIKVLQKFNLTS-LPLYKSVLR 470
Query: 414 AYINAKTPAYGIRDRMRADNVF 435
AYI A I + + D +
Sbjct: 471 AYIKADAVPPNISEMIARDQII 492
>gi|297832672|ref|XP_002884218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330058|gb|EFH60477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 491
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 192/408 (47%), Gaps = 9/408 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P SI L + ++G+ + +E+ + LR + ALQ+S+W+ ++ + E D
Sbjct: 51 PSASIIRVLDGWLDQGHLVKTSELHGIIKMLRKFSRFSHALQISDWMSEHRVHEITEGDV 110
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDK 122
A LDLIAK+ GL +AE + + IP R +Y LL NC A V KAE+VF MK+
Sbjct: 111 AIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALL-NCYASKKVLHKAEQVFQEMKEL 169
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGM 181
GF N +L LY R K + + LL ME VK F+ + +D+ GM
Sbjct: 170 GFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDGTVKPDIFTVNTRLHAYSAVSDVEGM 229
Query: 182 DQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLL 239
++ + +++ G+ D T A A Y+ G EKA ML++ E N ++ + +L+
Sbjct: 230 EKFLMRCEADTGLHLDWRTYADTANGYIKAGLTEKAIEMLRKSEQMVNPRKRKHAYEVLM 289
Query: 240 PLYAELGKADQVARIWKLC-ESNPWLDVC-MAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
Y GK ++V R+W L E + + + ++ I A K++ +EE E + +
Sbjct: 290 SFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLF 349
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ L+ Y M+ K +++V + + W+ L + GE+EKA
Sbjct: 350 DIRIPHLLITGYCKKGMMEKAEEVVNMLVQKWRVEDTSTWERLALGYKMAGEMEKAVEKW 409
Query: 358 LKAQQQNK--FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+A +K ++P M +D R D+ S KI + + G+++
Sbjct: 410 KRAIDVSKPGWRPHQVVLMSCVDYLEGRRDMESLRKILRLLSERGHIS 457
>gi|255548417|ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545745|gb|EEF47249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 205/445 (46%), Gaps = 26/445 (5%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ TL ++ EG +++ E++ + LR R + A ++ EW+E +K++F D A
Sbjct: 53 SVSRTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFEIMEWME-KRKMNFSYADRAIR 111
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVK-KAEEVFNRMKDKGFP 125
LDLI K RG+ AE Y + S + L NC + KA +F M +K F
Sbjct: 112 LDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKALALFQEMDEKKFL 171
Query: 126 VTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+S N L+ +Y RL + +KV ++ M+K V F+Y I + G ND G+D+V
Sbjct: 172 YSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQSYGCLNDFQGVDRV 231
Query: 185 VEAMKSEGIEPDS--STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+ + ++G + + +T + LA Y+ G EKAE+ LK++E +R L+ +Y
Sbjct: 232 LREIVNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAIMGFRNREAYHFLISIY 291
Query: 243 AELGKADQVARIWKLCESNPWLD---VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
A G +++V R+W L +S+ + + ++A KL VE F+
Sbjct: 292 AGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREWESGCTNYDM 351
Query: 300 KHYTALLKVYADHKMLSKGK----DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ ++V+ H M + + D +K+ GP + A + + ++ + D
Sbjct: 352 RIANVAIRVFLQHDMYEEAELIFDDALKRTR------GPF-FKARERFMLFFLKIHQLDL 404
Query: 356 IL------LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
L +++++KP+ + D + D+ EK+ ++ + + +
Sbjct: 405 ALKHMRAAFSESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILKHINCLNS-SVYS 463
Query: 410 TLVQAYINAKTPAYGIRDRMRADNV 434
L++ YI A A +R R+ DN+
Sbjct: 464 LLLKTYIAAGKLAPEMRQRLEEDNI 488
>gi|413953408|gb|AFW86057.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 596
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 205/468 (43%), Gaps = 60/468 (12%)
Query: 26 EIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK 85
E+ + + +R +Y +L+LSE + + ++ D A LDLIAK RG+ AE Y
Sbjct: 113 EVGVCVRRMRRNALYRPSLKLSEVM-ARRGMNPTVSDQAIRLDLIAKSRGIAAAEKYFLD 171
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+PE+ + + Y LL + +KAE + +MK+ F T+ + N L+ +Y ++++ +
Sbjct: 172 LPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKELNFAFTAMSFNSLMTMYTKVNQAE 231
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV ++ M+ ++V F+Y + + D+ G+++V+E MK +G + PD +T + L
Sbjct: 232 KVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPGVERVIEEMKRDGRVAPDWTTYSNL 291
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNP 262
A YV G EKAEA LKE+E N + L+ LY +V R+W+ L NP
Sbjct: 292 ASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQFLITLYGRTQNLVEVHRVWRSLKRDNP 351
Query: 263 WLD--VCMAAIEAWGKLNKVEEAEAVFKRM------------------------------ 290
+ + I+ L + AEA FK
Sbjct: 352 RMANMSYLNMIQVLANLKDLSAAEACFKEWEARHIHPPKTNTKGSGADNTPGADPKSPSN 411
Query: 291 ------------SKTWKKLSTKH-------YTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+T + L KH A++K Y ML K + K+ G
Sbjct: 412 PPNNQSGTKETGDETAEDLQPKHPKYDIRVANAMIKAYITEGMLDKAVAMKKRAKMRGGR 471
Query: 332 IGPLAWDALVKLHVEGGEVEK----ADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDI 386
+ W+ ++ +++ G+++ AD + K + + P + +M + + D+
Sbjct: 472 LNAKTWEIFMEHYLKTGDLKMAHWCADRAMKKGHSSGRIWVPPPAVTETLMSYFEENKDV 531
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
E+ +++V F+ LV+ Y A G+R R++ +NV
Sbjct: 532 DGAERYVGALKKVQKDLGAPVFEPLVRTYAAAGKKFPGMRQRLKIENV 579
>gi|15240937|ref|NP_198098.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214236|sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460
gi|332006308|gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 205/443 (46%), Gaps = 13/443 (2%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+ P S+ S L + + G+ +S +E+ L L Y ALQ+ EW+E K ++F
Sbjct: 48 NGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVY 107
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVV----YRTLLANCVAGNNVKKAEEVFN 117
D A LDLI K GL++ E Y +K+ S V Y LL V VK+AE +
Sbjct: 108 DIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALME 167
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
++ GF VT N+++ LY+ + +KV V+ +M+ + SY + ++ + +
Sbjct: 168 KLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVS 227
Query: 177 DLTGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
+ ++ V + M + +E S+ LA Y+ G EKA +L++ E + +R
Sbjct: 228 GVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGY 287
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNK---VEEAEAVFKRMSK 292
L+ LYA LG + V R+W++ +S C+ I L K +EEAE VF
Sbjct: 288 FFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEA 347
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ LL Y + + K + L + E G W+ L++ V+ +EK
Sbjct: 348 QCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEK 407
Query: 353 A-DSI--LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
A D++ + ++ ++P + M I + + K I + ++G +A ++
Sbjct: 408 AIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLG-LASLPLYR 466
Query: 410 TLVQAYINAKTPAYGIRDRMRAD 432
L++ + +AK PAY I + M+ D
Sbjct: 467 LLLRMHEHAKRPAYDIYEMMKLD 489
>gi|222637397|gb|EEE67529.1| hypothetical protein OsJ_24995 [Oryza sativa Japonica Group]
Length = 491
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 17/358 (4%)
Query: 46 LSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVA 105
+SEW+ + F+ +D+A LDLI ++ G AE+Y +P+ + E Y LL NC
Sbjct: 103 VSEWMNAKGHVKFLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALL-NCYT 161
Query: 106 GN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQF 163
V+K+ F +MK+ GF ++ N ++ LY L + +KV V+ M+ + F
Sbjct: 162 RELLVEKSLAHFQKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNF 221
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
SY+I I+ G D GM+ +E M+ E I D +T A++A +Y+ G +EKA + LK+
Sbjct: 222 SYRICINSYGTRADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKK 281
Query: 223 MEGD-NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV-----CMAAIEAWGK 276
E N+K+ + L+ LY LG +V R+W L SN + M A+ K
Sbjct: 282 AEAKINIKDSD-SYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLV--K 338
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
LN++EEAE + K + + LL Y +L K + L+ + G +
Sbjct: 339 LNEIEEAEVLLKEWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTS 398
Query: 337 WDALVKLHVEGGEVEKADSILLKA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
W + + E G+ KA + A + P +I+ GD+ E
Sbjct: 399 WAIVAAGYAEKGDAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVE 456
>gi|356526773|ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 202/438 (46%), Gaps = 13/438 (2%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
+ +L + + + + E+ + LR R++Y AL+LSE + + + D+A L
Sbjct: 39 VRQSLNNFVKSRKRVYKWEVGDTLKKLRDRKLYQPALKLSETMAKRNMIKTVS-DHAIHL 97
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPV 126
DL+AK RG+ AE+Y +PE + + Y LL NC +K+E + +MK+ P+
Sbjct: 98 DLLAKARGITAAENYFVSLPEPSKNHLCYGALL-NCYCKELMTEKSEGLMEKMKELSLPL 156
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+S N L+ LY ++ + +K+ ++ M+ NV L ++Y + + ND++G+++V
Sbjct: 157 SSMPYNSLMTLYTKVGQPEKIPSLIQEMKASNVMLDSYTYNVWMRALAAVNDISGVERVH 216
Query: 186 EAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
+ MK G + D +T + LA +V G +KAE LKE+E N + + L+ LY
Sbjct: 217 DEMKRGGQVTGDWTTYSNLASIFVDAGLFDKAEVALKELEKRNAFKDLTAYQFLITLYGR 276
Query: 245 LGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
G +V R+W +L + I+ L + AE F+ +
Sbjct: 277 TGNLYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFREWECGCPTYDIRV 336
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA-----DSI 356
L++ Y ML K ++L ++ G + + ++ G+ + A ++I
Sbjct: 337 ANVLIRAYVKLDMLEKAEELKERARRRGAKPNAKTLEIFMDYYLLKGDFKLAVDYLNEAI 396
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ K+ P ++M + + D+ E+ +++ + F++L++ Y
Sbjct: 397 SMGRGNGEKWVPSSRIISIMMRHFEQEKDVDGAEEFLEILKKSVESPGVEVFESLIRTYA 456
Query: 417 NAKTPAYGIRDRMRADNV 434
A + ++ R++ +NV
Sbjct: 457 AAGRISSAMQRRLKMENV 474
>gi|356514762|ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Glycine max]
Length = 492
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 201/440 (45%), Gaps = 12/440 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P IS+ L ++ EEGN + + + LRTR +AL++SEW+ ++K L RD
Sbjct: 44 PSISVVPVLDEWIEEGNAVDGPHLHHIIKILRTRNRNTQALEVSEWM-SSKGLPISSRDQ 102
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI ++ G++ AE Y+Q + + + V+ LL V V K+ + +MKD G
Sbjct: 103 AVQLDLIGRVHGVESAERYLQSLSDGDKTWKVHGALLNCYVREGLVDKSLSLMQKMKDMG 162
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F V+ N ++ LY + + +KV VL M+K+ V FSY+I I+ DL ++
Sbjct: 163 F-VSFLNYNNIMSLYTQTQQYEKVPGVLEQMKKDGVPPNIFSYRICINSYCVRGDLANVE 221
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+++E M+ E I D T +++ Y+ +EKA L + E + + L+
Sbjct: 222 KLLEEMEREPHIGIDWITYSMVTNFYIKADMREKALVCLMKCEKKTHRGNTVAYNHLISH 281
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWG---KLNKVEEAEAVFKRMSKTWKKLS 298
A L + R WKL ++N + I G KL ++++AE V +
Sbjct: 282 NAALRSKGGMMRAWKLQKANCKKQLNREYITMLGCLVKLGELDKAEKVLGEWELSGNTCD 341
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
+ LL Y ++ K + L+++M G P +W + +V +EKA +
Sbjct: 342 FRVPNILLIGYCQRGLVEKAEALLRKMVAEGKTPIPNSWSIVASGYVAKENMEKAFQCMK 401
Query: 359 KA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+A Q +++P I DI E + + V + R + +L++
Sbjct: 402 EAVAVHAQNKRWRPKVDVISSIFSWVTNNRDIEEAEDFVNSWKSVNAMNR-GMYLSLMKM 460
Query: 415 YINAKTPAYGIRDRMRADNV 434
I GI + M+ADN+
Sbjct: 461 CIRYGKHVDGILESMKADNI 480
>gi|224121680|ref|XP_002330626.1| predicted protein [Populus trichocarpa]
gi|222872230|gb|EEF09361.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 191/384 (49%), Gaps = 29/384 (7%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P +SI + ++ +EGN + ++++ + R R + ALQ+S+W+ + + D+
Sbjct: 16 PKVSIIPVIEQWLKEGNSIKQSDLQNFIKLFRRHRRFSHALQISQWMSDERGSEQSPGDF 75
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAG-NNVKKAEEVFNRMKDK 122
A LDLI+K+ GL++AE Y IP+ RG VY LL NC A ++KAE +M++
Sbjct: 76 AVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALL-NCYAHKRRLEKAEATMQKMREL 134
Query: 123 GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G V + + N +L LY + + +K+ ++ ME++ V +++ I + ++++ M
Sbjct: 135 GL-VQTLSYNVMLSLYSHMGRYEKLEALVKEMEEKGVNSDIYTFNIRLHAYVATSNIEEM 193
Query: 182 DQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG------DNLKEHRWT 234
++++ M+++ I D T +A Y+ G EK+ MLK E K H +
Sbjct: 194 EKLLMKMETDSLINIDFHTFFAVANGYLKAGLLEKSIVMLKRAEELTVPMVGTTKAHAY- 252
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWL----DVCMAAIEAWGKLNKVEEAEAVFKRM 290
+LL LY G D V R+W ++ + +CM I + +L ++ AE +
Sbjct: 253 -EMLLTLYGSAGNKDGVYRVWNSYKNTGRIFNSTYICM--INSLMRLGDIDGAEWI---- 305
Query: 291 SKTWKKLSTKH----YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
S+ W T + +++ Y+ + K ++ V ++ ESG + +WD L +
Sbjct: 306 SEEWVSRKTLYDIRIPNTMIRAYSRKGLWKKAEEYVNKIVESGMQLEASSWDHLATGYHF 365
Query: 347 GGEVEKADSILLKAQQQNK--FKP 368
GG++ KA L KA +K +KP
Sbjct: 366 GGQMAKAVETLKKAISISKPGWKP 389
>gi|297743994|emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 195/405 (48%), Gaps = 15/405 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S+ TL ++ +EG +++ E++ + LR R + AL++ +W+E N+K+ F DYA
Sbjct: 98 SVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWME-NRKIFFSYADYAVR 156
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDKGFP 125
LDL++K +GL AE Y + S + + Y TLL NC + +KA +F +M + F
Sbjct: 157 LDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLL-NCYCKEKMEEKALALFEKMDELNFA 215
Query: 126 VTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
TS N L+ L+ RL K ++ L+ M+K ++ F+Y IL+ + ND+ G ++V
Sbjct: 216 STSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERV 275
Query: 185 VEAMKSEGIEPDS-STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+E +K E + S +T + LA YV+ EKAE LK++E + R L+ LYA
Sbjct: 276 LEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYA 335
Query: 244 ELGKADQVARIWKLCESNPWLDVCMA---AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
+ +V R+W +S M+ ++A LN V+ + F+ + +
Sbjct: 336 GINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVR 395
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL--AWDALVKLHVEGGEVEKADSILL 358
++ + M+ + ++ + + GP A D + H++ E++ A +
Sbjct: 396 LANVAVRAFLGWDMIKDAESILYEAVKRSS--GPFYTALDMFMAHHLKVREIDTALKYME 453
Query: 359 KAQQQ---NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
A + N+++P + + + + D+ EK ++ +
Sbjct: 454 AAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNIS 498
>gi|15225409|ref|NP_179663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206559|sp|Q9SKU6.1|PP166_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g20710, mitochondrial; Flags: Precursor
gi|4454477|gb|AAD20924.1| hypothetical protein [Arabidopsis thaliana]
gi|51315392|gb|AAT99801.1| At2g20710 [Arabidopsis thaliana]
gi|330251965|gb|AEC07059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 490
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 192/408 (47%), Gaps = 9/408 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P SI L + ++GN + +E+ + LR + ALQ+S+W+ ++ + E D
Sbjct: 50 PSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDV 109
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDK 122
A LDLIAK+ GL +AE + + IP R +Y LL NC A V KAE+VF MK+
Sbjct: 110 AIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALL-NCYASKKVLHKAEQVFQEMKEL 168
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGM 181
GF N +L LY R K + + LL ME E VK F+ + +D+ GM
Sbjct: 169 GFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGM 228
Query: 182 DQ-VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLL 239
++ ++ +G+ D T A A Y+ G EKA ML++ E N ++ + +L+
Sbjct: 229 EKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLM 288
Query: 240 PLYAELGKADQVARIWKLC-ESNPWLDVC-MAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
Y GK ++V R+W L E + + + ++ I A K++ +EE E + +
Sbjct: 289 SFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLF 348
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ L+ Y M+ K +++V + + W+ L + G++EKA
Sbjct: 349 DIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKW 408
Query: 358 LKAQQQNK--FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+A + +K ++P M +D + D+ KI + + G+++
Sbjct: 409 KRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS 456
>gi|242083618|ref|XP_002442234.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
gi|241942927|gb|EES16072.1| hypothetical protein SORBIDRAFT_08g016710 [Sorghum bicolor]
Length = 501
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 193/438 (44%), Gaps = 11/438 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S L ++AEEG + + ++ + LR + AL++ EW+ T ++ + D+
Sbjct: 42 PKRSAVVVLRRWAEEGRTVEKYQLNRVVRELRKYGRFKHALEICEWMRTRPEMRLLPGDH 101
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDL+AK+RGL A + + +PE + LL V +KAE + M G
Sbjct: 102 AVHLDLVAKVRGLASAVKFFEDMPERAKAPSTCNALLHAYVQHGAREKAEAMMAEMARAG 161
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ + N ++ LY + ++V +++ + + V +Y + + + + +
Sbjct: 162 YLTCALPFNHMMSLYMASGELERVPEMIKELRRYTVP-DLVTYNMWLTYCSKKKSVKSAE 220
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V MK + + PD T ++L Y++ G + L EME ++ R LL LY
Sbjct: 221 KVFALMKDDRVVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKMASRKERAAYSSLLTLY 280
Query: 243 AELGKADQVARIW-KLCES-NPWLDV---CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
A L + R+W K+ E+ + D CM + + + N + AE +++
Sbjct: 281 ASLSDRGNLDRVWNKMRETFRKFSDTEYKCM--LTSLTRFNDIAAAEGLYREWESASGTR 338
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
++ +L Y + M+ K + + Q+ E G W+ + ++ + +K L
Sbjct: 339 DSRIPNTILSYYIKNGMIEKAESFLGQIVEKGVKPSYSTWELFIWGYLGDNKTDKVLECL 398
Query: 358 LKA-QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
KA K++P I Q K GDI + EK+ R GYV + + ++++ Y
Sbjct: 399 KKALSSLEKWEPNHELATAIFSQVEKTGDIEAAEKLLVVFRDAGYVTT-EMYNSVLRTYA 457
Query: 417 NAKTPAYGIRDRMRADNV 434
AK + +RM D V
Sbjct: 458 EAKLMPLIVDERMEQDKV 475
>gi|357151797|ref|XP_003575907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 198/441 (44%), Gaps = 16/441 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S L ++ EEG + + ++ + LR R + AL++ EW+ T ++ + D+
Sbjct: 42 PKRSAVVVLRRWTEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEMKLLPGDH 101
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDL+AK+RGL AE + + +PE +G LL V KAE + M D G
Sbjct: 102 AVHLDLVAKVRGLASAEKFFEDVPERAKGPSTCNALLHAYVQNGVRDKAEAMLREMADAG 161
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ + N ++ +Y + +KV +++ + + + +Y I + + N + +
Sbjct: 162 YLTCALPFNHMMSMYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSRKNSVKTAE 220
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V + MK + + PD T +++A Y++ G K L EME ++ R LL LY
Sbjct: 221 KVFDLMKDDKVFPDWMTFSLMASIYINAGLHVKGRDALVEMEKRASRKERTAYSSLLTLY 280
Query: 243 AELGKADQVARIW-KLCE-SNPWLDV---CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
A L + R+W K+ E + D CM + + + + AE+V+
Sbjct: 281 ASLSDRGNLDRVWSKMREIFRKFSDTEYKCM--LTSLTRFGDITAAESVYSEWESESGTR 338
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
++ +L + + + + ++ + + G W+ V ++ G E+ D IL
Sbjct: 339 DSRIPNTILSFHIKNGKMEMAESFLQHIMQKGVKPSYSTWELFVWGYL--GNDERIDKIL 396
Query: 358 --LKA--QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
LK +K++P + KRGDI + E++ +R GYV + + ++++
Sbjct: 397 ECLKKALSSLDKWEPNPQLVAALFSLIEKRGDIEAAEELLVVLRGAGYVTT-EIYNSVLR 455
Query: 414 AYINAKTPAYGIRDRMRADNV 434
Y A+ I +RM D V
Sbjct: 456 TYSKAEMMPLIIDERMDQDKV 476
>gi|226502666|ref|NP_001140872.1| uncharacterized protein LOC100272948 [Zea mays]
gi|194701536|gb|ACF84852.1| unknown [Zea mays]
gi|413924212|gb|AFW64144.1| hypothetical protein ZEAMMB73_253479 [Zea mays]
Length = 525
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 198/442 (44%), Gaps = 15/442 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P + + + ++A++ +S+ E+ A+ LR R Y +AL++ W+E+ L D+
Sbjct: 66 PAGTAAAAVERWAQDRVHVSQPELRRAIGMLRRERRYEQALEIFSWMESCSSLRLSSWDH 125
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A+ LDLIAK +AE Y K+ + LL V +V+KAE +++ G
Sbjct: 126 AARLDLIAKAYSTSQAEEYYNKLQSPATRQAASFPLLHCYVMERDVQKAETFMAQLQSHG 185
Query: 124 FPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
PV + N+++ LY +KV V+ LM++ N+ SY + ++ + + + +
Sbjct: 186 LPVDPHSFNEIMKLYVATCQYEKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQ 245
Query: 183 QVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
V + M E ++ ST LA + G +A+A L + E R ++
Sbjct: 246 SVFQVMLNDETVKVGWSTYCTLANIFRKNGLNNEAQACLVKAEAKLSPAGRLGYSFVMTC 305
Query: 242 YAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
YA L +D V R+W+ +S P MAA+ K+ + +AE +F + +K
Sbjct: 306 YAALNDSDGVMRMWEASKSVPGRIPTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKHD 365
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL- 357
+ LL Y ++ + K + L M E G W+ L++ +V+ +++KA +
Sbjct: 366 VRVSNVLLGAYVRNRWIEKAERLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCMK 425
Query: 358 --LKAQQQNKFKPMFSSYMLIMDQYAKRG---DIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L + ++P I + ++G D + K+ R + +++L+
Sbjct: 426 KGLSLLKSCHWRPPVELMEAIGKHFEEQGSADDAYRYIKVLQRFN----LTSLPLYKSLI 481
Query: 413 QAYINAKTPAYGIRDRMRADNV 434
+AYINA + + + D +
Sbjct: 482 RAYINADVVPPNVLEMIAKDQI 503
>gi|125536853|gb|EAY83341.1| hypothetical protein OsI_38557 [Oryza sativa Indica Group]
Length = 444
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 178/399 (44%), Gaps = 11/399 (2%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN 102
LQ+ EW+ T ++ + D+A LDL+AK+RGL AE + + +PE +G LL
Sbjct: 24 CLQICEWMRTQPEMRLLPGDHAVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHA 83
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLT 161
V KAE + M G+ + N ++ LY + +KV +++ + + +
Sbjct: 84 YVQHGRRDKAEAMLEEMAKAGYLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-D 142
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+Y I + + N + ++V + MK E + PD T ++L Y++ G K L
Sbjct: 143 LVTYNIWLTYCSKKNSVKAAEKVYDLMKDERVVPDWMTFSLLGSIYINAGLHVKGRDALV 202
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCES-NPWLDV---CMAAIEAWGK 276
EME ++ R LL LYA L + R+W K+ E+ + D CM + + +
Sbjct: 203 EMEKRASRKERAAYSSLLTLYASLSDRGNLDRVWRKMRETFRKFSDTEYKCM--LTSLTR 260
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+ EAE+ + ++ +L Y + M+ K + + + + G
Sbjct: 261 FGDIAEAESFYSEWESASGTRDSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYST 320
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQ-QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
W+ V ++ G ++K L KA K+ P I Q ++GDI + EK+
Sbjct: 321 WELFVWGYLSDGRMDKVLECLKKALSCLEKWDPNPQLATAIYSQIEEKGDIEAAEKLLVM 380
Query: 396 MRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
R+ GYV + + ++++ Y A+ + +RM D V
Sbjct: 381 FREAGYVTT-EIYNSVLRTYAKAELMPLIVDERMDQDKV 418
>gi|226530677|ref|NP_001151760.1| tetratricopeptide-like helical [Zea mays]
gi|195649553|gb|ACG44244.1| tetratricopeptide-like helical [Zea mays]
gi|223942137|gb|ACN25152.1| unknown [Zea mays]
gi|413916645|gb|AFW56577.1| Tetratricopeptide-like helical [Zea mays]
Length = 501
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/438 (23%), Positives = 192/438 (43%), Gaps = 12/438 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S L ++A+EG + + ++ + LR + AL++ EW+ T ++ + D+
Sbjct: 43 PKRSAVVVLQRWADEGRTVQKYQLNRVVRELRKYGRFKHALEICEWMRTQPEMRLLPGDH 102
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDL+AK+RGL A + + +PE +G LL V +KAE + M G
Sbjct: 103 AVHLDLVAKVRGLASATKFFEDMPERAKGPSTCNALLHAYVQNGAREKAEAMLAEMARVG 162
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ + N ++ LY + ++V +++ + + + +Y I + + + + +
Sbjct: 163 YLTCALPFNHMMSLYMATGELERVPEMIKELRRYTLP-DLVTYNIWLTYCSKKDSVKSAE 221
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V MK + + PD T ++L Y++ G + L EME ++ R LL LY
Sbjct: 222 KVFGLMKDDCVVPDWMTFSLLGSIYINAGLHVEGRNALVEMEKRASRKERAAYSSLLTLY 281
Query: 243 AELGKADQVARIWKLCESN--PWLDV---CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
A L + R+W + D CM + + + + + AE++F T
Sbjct: 282 ASLSDRGNLDRVWNKMRGTFRKFSDTEYKCM--LTSLLRFDDIAAAESIFSEWESTSGTR 339
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
++ +L Y + M+ K + + + E G W+A V ++ G + +K +
Sbjct: 340 DSRIPNTILSYYIKNGMIKKAESFLDHIVEKGVKPSYSTWEAFVWGYL-GDKTDKVLECM 398
Query: 358 LKAQQ-QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
KA K++P I Q K GDI + EK+ R YV + + ++++ Y
Sbjct: 399 KKALSCLEKWEPNHELATAIFSQIEKTGDIEAAEKLLVIFRDAEYVTT-EMYNSVLRTYA 457
Query: 417 NAKTPAYGIRDRMRADNV 434
AK + +RM D V
Sbjct: 458 EAKLMPLIVDERMEQDKV 475
>gi|255553773|ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542909|gb|EEF44445.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 204/440 (46%), Gaps = 13/440 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P SI L ++ EG+ + +A + + ++ + + AL++S W+ + D
Sbjct: 60 PKESIIPVLNQWVSEGHTVGKALLQSLVHLMKGYKRFNHALEMSHWMTDCRYFSLSPSDV 119
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A L+LI ++ G AE Y +KI + + VY LL+ V N+V+KAE V M++KG
Sbjct: 120 AVRLELIYRVYGSAHAEMYFEKISDKLKSGNVYGALLSGYVRENSVQKAEAVLQEMREKG 179
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+SF N ++ LY + + D+L ME+ + +++ + L+ ++D++GM+
Sbjct: 180 IATSSFPYNIMINLYAQNGAFEKIDILKEEMERNGIPQDKYTMRNLMAAYVAASDISGME 239
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRWTCRLLLP 240
+++ +++ + ++ A Y+ G EKA ML++ME + + LL
Sbjct: 240 RILNQLETHPQLGHGWQAYSVAASGYLKVGLIEKALKMLRKMEETMPIGKKTSAFNYLLT 299
Query: 241 LYAELGKADQVARIWK----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LYA+ G+ D++ R+W L E CM I + K++ +E AE +F+
Sbjct: 300 LYAKTGRKDELYRVWNSYKPLAEVKETQFCCM--ISSLEKVDDIEGAERIFEEWESQCMM 357
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ LL Y K L + + A G W + ++ ++ KA +
Sbjct: 358 YDFRVLNKLLLAYC-RKGLYTKAEAAFKKAAEGRTPYASTWITMAMSYIGQNQMSKAVEM 416
Query: 357 LLKAQQQNK--FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L KA ++ +KP + +D ++GD+ E+I ++ + R + LV+
Sbjct: 417 LKKAISVSRKGWKPNPITLTTCLDYLEEQGDVEGIEEIVKSLKSTESLTR-DIYHRLVRT 475
Query: 415 YINAKTPAYGIRDRMRADNV 434
Y A P + D+M+ DN+
Sbjct: 476 YTAAGIPVTKVIDKMKMDNI 495
>gi|302805546|ref|XP_002984524.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
gi|300147912|gb|EFJ14574.1| hypothetical protein SELMODRAFT_423640 [Selaginella moellendorffii]
Length = 547
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 211/448 (47%), Gaps = 31/448 (6%)
Query: 14 KYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKK-LDFIERDYASCLDLIAK 72
++ EGN+++R + + LR R+ + AL++S+W+ K+ + + ++ + +DL+++
Sbjct: 81 EWMAEGNEITRYGLIIVRHKLRRRKRFHHALRISDWIAYKKRVIPYDHKEALNHIDLVSR 140
Query: 73 LRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
+ + +A +P ++ Y LL+ V + AE ++ +K G S N
Sbjct: 141 V-SVTRAREMFDNLPADWKSREGYTVLLSMYVRHSMAADAESIYTTLKRWGLRSIS-PIN 198
Query: 133 QLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
+L LY++ KVA+++ E+ L S+ IL+ + ++ + M+ +VE M+S+
Sbjct: 199 MMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEMESLVEMMESK 258
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAML----KEMEGDNLKEHRWTCRLLLPLYAELGK 247
D T +LA Y G +KA+ ML ME R T +++ +Y +G
Sbjct: 259 NFL-DEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVIIVIYGFIGD 317
Query: 248 ADQVARIWKLCES-NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+ V RIW + +P + + I + K+ E+AE+ F ++ +K+ +L
Sbjct: 318 VEGVKRIWDITSRMDPTAEDYICMIRSSAKVGLFEQAESGFLALAAQ-RKMHITVCNVML 376
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA-DSILLKAQ---- 361
+V + + + L++++ + G P + L+ +H++ +++A D L+ Q
Sbjct: 377 QVCQAGNFVLRAESLLRKIHQMGFKPDPATYHHLIAIHLKNDNIQRALDLFQLERQVFRV 436
Query: 362 ------QQNKF---------KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
Q+ KF KP + ++M A+RG++ + E +F R + +
Sbjct: 437 PFELSPQERKFMSTEPRKDIKPWVGTCRMMMLALAERGEVVACETLFRNWRLEKWKTDVR 496
Query: 407 QFQTLVQAYINAKTPAYGIRDRMRADNV 434
F L++AY A+ P G +R+ AD V
Sbjct: 497 LFNALLRAYEVAREPVAGFMERLEADGV 524
>gi|357131918|ref|XP_003567580.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 545
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 212/447 (47%), Gaps = 22/447 (4%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+A + S+ L K+ EG + ++ + LR + + +AL+L +W+ K ++
Sbjct: 89 NAGEGSVSRVLNKWVREGREARSVDLERYVKELRKYKRHAQALELMDWMVHTKGMNMSYT 148
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
++A LDL+ K+RG++ AE Y +P+ + Y LL + +KA ++F++M D
Sbjct: 149 NHAIRLDLVYKVRGIEAAEKYFNGLPDPAKNHRTYGALLNCYCSSKKEEKATDLFHKMDD 208
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G ++ N L+ LY +L + KKVA + M+ +NVK + +L+ N +
Sbjct: 209 LGIASSTLPFNNLMSLYMKLGQHKKVAGLFEEMKAKNVKPDNLTCCVLMTSYAALNKIDA 268
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLL 239
+++V++ M+ + S + LA YVS G EKAE+ LK++EG ++ R L+
Sbjct: 269 VEEVLKEMEEKNAALGWSAYSTLASIYVSAGLVEKAESALKKLEGLVQPRDGRQPFDFLM 328
Query: 240 PLYAELGKADQVARIWKLCESN-PWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LYA +G +V R+W + ++ P + + ++A KLN + + +F+ +
Sbjct: 329 SLYASVGNLSEVNRVWDVVKATFPKVTNTSYFSMLQALYKLNDADRIKQIFEEWESNHEC 388
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE------- 349
K + + + + + + + L ++ G + + H G E
Sbjct: 389 YDVKLTNIMTRAHLKNGLTKEAELLWEKAKAKGADFDSKTCELFLD-HYMGTEDMKSALH 447
Query: 350 -VEKADSILLKAQQQNKFK-PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
VE + KA + ++ K FS Y + ++ D+ EK+ +R +G + K
Sbjct: 448 WVENVTKLPKKAGKLDQEKIQKFSKY------FEEQKDVQGAEKLCSCLRTLGCIDG-KV 500
Query: 408 FQTLVQAYINAKTPAYGIRDRMRADNV 434
+++L++ Y+ A + +R +++ D +
Sbjct: 501 YESLLRTYLAAGETNHSLRQQIKDDKI 527
>gi|125591164|gb|EAZ31514.1| hypothetical protein OsJ_15655 [Oryza sativa Japonica Group]
Length = 531
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 172/384 (44%), Gaps = 24/384 (6%)
Query: 48 EWL-ETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAG 106
+W+ E + D A LDLIAK+RG+ AE Y +++P+ + + Y +LL
Sbjct: 151 DWMTERRDRFSLSSSDMAIQLDLIAKVRGVSHAEEYFEELPDPLKDKRTYGSLLNVYAQA 210
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFS 164
+K E F +M+ KGF + N L+ Y ++ + +L+ +ME+ NV +
Sbjct: 211 MMKEKTESTFEQMRKKGFATDTLPFNVLMNFYVDAEEAEKVSILIDEMMER-NVAFDVCT 269
Query: 165 YKILIDIKGQSNDLTGMDQVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
Y I I D M+QV M + E + + +T LA ++ G EKAE LKE
Sbjct: 270 YNIWIKSCAAMQDADAMEQVFNQMIRDETVVANWTTYTTLASMHIKLGNSEKAEESLKEA 329
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG-------- 275
E + L+ LY+ LGK ++V R+W W I G
Sbjct: 330 EKRTTGREKKCFHYLMTLYSHLGKKEEVYRVWN------WYKATFPTIHNLGYQEVLSAL 383
Query: 276 -KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
+L +E AE +++ + K LL YA ++K + + + E G + P
Sbjct: 384 VRLGDIEGAELLYEEWASKSSSFDPKTMNILLAWYAREGFVTKAEQTLNRFVEKGGNPKP 443
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQ---QQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
W+ L +++ G+ +A S L KA +K++P ++ ++ + ++ D S ++
Sbjct: 444 NTWEILGTAYLKDGQSSEALSCLEKATAVASPSKWRPRPTNVESLLANFKEKNDAESADR 503
Query: 392 IFHRMRQVGYVARFKQFQTLVQAY 415
+ + +R +++++L+ Y
Sbjct: 504 LMNVLRS-RRCEENEEYKSLINTY 526
>gi|302782563|ref|XP_002973055.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
gi|300159656|gb|EFJ26276.1| hypothetical protein SELMODRAFT_413483 [Selaginella moellendorffii]
Length = 547
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 213/457 (46%), Gaps = 31/457 (6%)
Query: 5 DISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKK-LDFIERDY 63
D + + ++ EGN+++R + + LR R+ + AL++S+W+ K+ + + ++
Sbjct: 72 DHMVVPIVEEWMAEGNEITRYGLIIVRHKLRRRKRFHHALRISDWIAYKKRVIPYDHKEA 131
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
+ +DL++++ + +A +P ++ Y LL+ V + AE ++ +K G
Sbjct: 132 LNHIDLVSRV-SVTRAREMFDNLPADWKSREAYTVLLSMYVRHSMAADAESIYTTLKRWG 190
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
S N +L LY++ KVA+++ E+ L S+ IL+ + ++ + M+
Sbjct: 191 LRSIS-PINMMLTLYQKHQVFWKVAELIRDAEEAGQSLNMCSFNILLPMTFRAGGVAEME 249
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML----KEMEGDNLKEHRWTCRLL 238
+VE M+S+ D T +LA Y G +KA+ ML ME R T ++
Sbjct: 250 SLVEMMESKNFL-DEHTYCMLASSYGRAGMVDKAKEMLMVVEDGMETGKFNRLRRTYNVI 308
Query: 239 LPLYAELGKADQVARIWKLCES-NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+ +Y +G + V RIW + +P + + I + K+ E AE+ F ++ +K+
Sbjct: 309 IVIYGFIGDVEGVKRIWDITSRMDPTAEDYICMIRSSAKVGLFELAESGFLALAAQ-RKM 367
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA-DSI 356
+L+V + + + L++++ + G P + L+ +H++ +++A D
Sbjct: 368 HITVCNVMLQVCQAGNFVLRAESLLRKIHQMGFKPDPATYHHLIAIHLKNDNIQRALDLF 427
Query: 357 LLKAQ----------QQNKF---------KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
L+ Q Q+ KF KP + ++M A+RG++ + E +F R
Sbjct: 428 QLERQVFRVPFELSPQERKFMSTEPRKDIKPWVGTCRMVMLALAERGEVVACETLFRNWR 487
Query: 398 QVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
+ + F L++AY A+ P G +R+ AD V
Sbjct: 488 LEKWKTDVRLFNALLRAYEVAREPVAGFMERLEADGV 524
>gi|296083491|emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 171/357 (47%), Gaps = 8/357 (2%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
+ ++S+ L + + + + E+ + LR R+ + AL+LSE + + ++ D
Sbjct: 33 SSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSETM-AKRGMNMTISD 91
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKD 121
A LDLI K RG+ AE+Y +PE+ + + Y LL NC + +KAE + RMK+
Sbjct: 92 QAIYLDLITKTRGVAAAENYFIDLPETSKNHLTYGALL-NCYCKELLTEKAEALMERMKE 150
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
++S N L+ LY ++ + +K+ ++ ++ ++ ++Y I + ND++G
Sbjct: 151 LKLGLSSMPYNSLMTLYTKIGQPEKIPTIIQELKSLDIMPDSYTYNIWMRALAAVNDISG 210
Query: 181 MDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+++V+E MK +G + D +T + LA YV G EKAE LKE+E N + L+
Sbjct: 211 VERVIEEMKRDGRVASDWTTYSNLASIYVDAGVFEKAEKALKELEKRNACRDLTAFQFLI 270
Query: 240 PLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LY +G +V R+W +L + I+ L + AE F+
Sbjct: 271 TLYGRIGNLLEVYRVWRSLRLAFPKTANVSYLNMIQVLVNLKDLPGAEKCFREWESGCSI 330
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ AL+ YA +L K ++L + G W+ + H++ E+++A
Sbjct: 331 YDIRVANALIGAYAKDGLLEKAEELKEHARRRGAKPNAKTWEIFLAYHLKNREMKQA 387
>gi|125575304|gb|EAZ16588.1| hypothetical protein OsJ_32060 [Oryza sativa Japonica Group]
Length = 475
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 185/401 (46%), Gaps = 12/401 (2%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN 102
+ LS W+ + L D A L+LI+K+ GL KA Y +P R Y +LL
Sbjct: 63 GIPLSMWMTERRHLHLSPGDVAYRLELISKVHGLDKAVEYFDAVPNQLRELQCYGSLLRC 122
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLT 161
V+KAEE+F M+ G S+A N ++ LY ++ + ++V + ME+ +
Sbjct: 123 YAEAERVEKAEELFENMRGMGM-ANSYAYNAMMNLYSQIGQVERVDSMYKAMEEGGIVPD 181
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
F+ L+ D+ +++V+E + S AI+ K ++ G +E+A +
Sbjct: 182 IFTIDNLVSAYADVEDVEAIEKVLEKASCNNLMSWHSF-AIVGKVFMKAGMQERALQAFQ 240
Query: 222 EMEG--DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC----MAAIEAWG 275
E E K+ R LL +YA+L +V RIW + S C M I
Sbjct: 241 ESEKRITARKDGRVAYGFLLTMYADLQMDSEVDRIWDVYRSKVPASACNTMYMCRISVLL 300
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
K+N + AE ++ ++ LL Y ++ K + LV Q + G +
Sbjct: 301 KMNDIVGAEKAYEEWESKHVYHDSRLINILLTAYCKEGLMEKAEALVDQFIKKGRTLFSN 360
Query: 336 AWDALVKLHVEGGEVEKADSILLK--AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
W L + + G+V KA + K A N++KP ++ ++ ++ +A++ ++ + E++
Sbjct: 361 TWYKLAGGYFKVGQVSKAADLTKKALASASNEWKPDLANVLMSINYFAEQKNVEAAEEMA 420
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
++++ + R + L++ Y+NA PA + DRM+ D +
Sbjct: 421 SLLQRLVPLTR-DVYHGLLKTYVNAGEPASDLLDRMKKDGI 460
>gi|357442213|ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 217/446 (48%), Gaps = 28/446 (6%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
++ TL +Y EG L + E+ + LR R + A ++ EW+ ++++F +YA
Sbjct: 105 TVSQTLNQYIIEGKALGKDELERCVQELRKYRRFHHAFEIMEWMMM-RQINFSWDNYAVY 163
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFP 125
LDL++K++G+ +AE++ P + + Y +LL NC + KA F++M + G+
Sbjct: 164 LDLVSKVKGVVEAENHFNSFPPPAKNKYTYGSLL-NCYCKELMLDKALSHFDKMDEFGY- 221
Query: 126 VTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+TS + L+ +Y RL + KV ++ +M++ +++T+F+Y + ++ NDL +++V
Sbjct: 222 LTSLSFTNLMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYILWMNSCAALNDLGEVERV 281
Query: 185 VEAMKSEGIEP-DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
E MK E + D T + LA Y+ G EKAE MLK++EG R T LL LYA
Sbjct: 282 YEEMKREDEDKIDWKTYSNLAAIYIKAGFFEKAELMLKKVEGVMKPRQRETYHFLLSLYA 341
Query: 244 ELGKADQVARIW-KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
G +V R+W L + P + + + L ++ + E + K + K W+ +
Sbjct: 342 GTGNVKEVYRVWGTLKKITPVTN--RSYLIMLSNLRRLNDMEGIIK-LFKEWESRHVSYD 398
Query: 303 TALLKVYADHKMLSKGKD----LVKQMAESGCHIGPL--AWDALVKLHVEGGEVEKADSI 356
+ L+ V A LS+ D LV + A C GP + + +E G+++ A S
Sbjct: 399 SRLVGV-AVQAYLSQNMDKEAVLVFEEALKSCR-GPFFRIREMFMASLLEKGQLDGAMSH 456
Query: 357 L---LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
L L K++P + Y + D+ +++ +R + ++ ++
Sbjct: 457 LEAALSEASDYKYQPSPQVVSAFLKYYEEETDLDGVDELSKILRSHNFD------ESYIK 510
Query: 414 AYINAKTPAYGIRDRMRADNVFPNKA 439
I A + GI ++ D+ + N+A
Sbjct: 511 TCITASESSPGIHTVLKEDS-YVNQA 535
>gi|22165052|gb|AAM93669.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432900|gb|AAP54476.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575303|gb|EAZ16587.1| hypothetical protein OsJ_32059 [Oryza sativa Japonica Group]
Length = 545
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 203/440 (46%), Gaps = 11/440 (2%)
Query: 4 PDISIHSTLTKYA-EEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
P + + L ++ E +++ EI + L RR + +ALQLS W+ L D
Sbjct: 93 PRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWMTERLHLHLSPGD 152
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
A L+LI K+ GL +A Y +P+ + + Y +LL V+KAEE+F +M+
Sbjct: 153 VAYRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEAKCVEKAEELFEKMRGM 212
Query: 123 GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G +S+A N ++ LY + + ++V + ME+ + F+ L+ + D+ +
Sbjct: 213 GM-ASSYAYNVMMRLYLQDGQVERVHSMHRTMEESGIVADVFTTDTLVAAYVVAEDIEAI 271
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE-HRWTCRLLLP 240
++V+E + + A + K + G +E+A +E E K+ +R LL
Sbjct: 272 EKVLEKADTCNDLMTWHSYATIGKVLMQSGMEERALQAFQESEKKIAKKSNRVAYGFLLT 331
Query: 241 LYAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+YA+LG +V RIW + +S C M I K+N + AE ++
Sbjct: 332 MYADLGMNSEVDRIWDVYKSKVPASACNSMYMCRISVLLKMNDIVGAEKAYEEWESKHVY 391
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
++ LL Y ++ K + LV Q + G W L + + G+ KA +
Sbjct: 392 HDSRLINLLLTAYCKEGLMEKAEALVDQFVKKGRTPFGNTWYKLAGGYFKVGQASKAADL 451
Query: 357 LLK--AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K A N++ P ++ ++ ++ +A++ ++ + E++ ++++ R + L++
Sbjct: 452 TKKALASGSNEWTPDLTNVLMSLNYFAEQKNVEAAEEMASLLQRLITPTR-DIYHGLLKT 510
Query: 415 YINAKTPAYGIRDRMRADNV 434
Y+NA P + DRM+ D +
Sbjct: 511 YVNAGKPVSDLLDRMKKDGM 530
>gi|255647669|gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 138/258 (53%), Gaps = 6/258 (2%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+D ++ TL +Y EG + + E+ + LR R + AL++ EW+E +K++F
Sbjct: 37 LDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEI-RKVNFSW 95
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVK-KAEEVFNRM 119
+YA LDL++K +G+ AE++ +P + Y LL NC +K KA F+ M
Sbjct: 96 SNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALL-NCYCKELMKDKALSHFDTM 154
Query: 120 KDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
+ G+ VT+ A N ++ L+ +L + +KV ++ LM+K + ++ F+Y I ++ SNDL
Sbjct: 155 DELGY-VTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDL 213
Query: 179 TGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
G ++V E MK+E + T + LA YV EKAE MLK +E + R
Sbjct: 214 GGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHC 273
Query: 238 LLPLYAELGKADQVARIW 255
LL LYA G +V R+W
Sbjct: 274 LLGLYAGTGNLGEVHRVW 291
>gi|356536682|ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 138/258 (53%), Gaps = 6/258 (2%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+D ++ TL +Y EG + + E+ + LR R + AL++ EW+E +K++F
Sbjct: 37 LDITGGTVSQTLDQYIMEGKVIKKPELERCVEQLRKYRRFQHALEIIEWMEI-RKVNFSW 95
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVK-KAEEVFNRM 119
+YA LDL++K +G+ AE++ +P + Y LL NC +K KA F+ M
Sbjct: 96 SNYAVQLDLVSKTKGVDAAENFFGGLPPPAKNRYTYGALL-NCYCKELMKDKALSHFDTM 154
Query: 120 KDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
+ G+ VT+ A N ++ L+ +L + +KV ++ LM+K + ++ F+Y I ++ SNDL
Sbjct: 155 DELGY-VTNLAFNNVMTLFMKLGEPQKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDL 213
Query: 179 TGMDQVVEAMKSEGI-EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
G ++V E MK+E + T + LA YV EKAE MLK +E + R
Sbjct: 214 GGAERVYEEMKTENEGQIGWHTYSNLASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHC 273
Query: 238 LLPLYAELGKADQVARIW 255
LL LYA G +V R+W
Sbjct: 274 LLGLYAGTGNLGEVHRVW 291
>gi|302143279|emb|CBI21840.3| unnamed protein product [Vitis vinifera]
Length = 446
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 188/422 (44%), Gaps = 59/422 (13%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
+SI L ++ +EG + + ++ + LRT + Y AL++ EW+ D D A
Sbjct: 49 VSIVPALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAI 108
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVA-GNNVKKAEEVFNRMKDKGF 124
LDLI+K+ GL++AE Y + P S R VY LL NC + +++KAE + M+D GF
Sbjct: 109 QLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALL-NCYSQKKSLEKAEAIMQEMRDMGF 167
Query: 125 PVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
V + + N +L LY RL K +K+ +++ ME+ + L F+Y I ++ ++D+ GM++
Sbjct: 168 -VKTLSYNVMLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEK 226
Query: 184 VVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
++ ++++ + D + + A Y+ KEKA MLK
Sbjct: 227 LLMKLETDPAVNSDWNAYIVAANGYLKADLKEKAVEMLK--------------------- 265
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
N L KL+ ++ AE F+ K +
Sbjct: 266 ------------------NSLL-----------KLDDMDGAEKTFEEWLSGNKFFDFRVP 296
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA-- 360
L++ Y +L K + LV + E G + WDAL + E ++EKA L KA
Sbjct: 297 NLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALL 356
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
+KP + ++ +GD+ E + +R+ V+ + LV YI ++
Sbjct: 357 ATSQGWKPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLVSAYDS-DRLVN-YIRSEE 414
Query: 421 PA 422
P
Sbjct: 415 PG 416
>gi|326502008|dbj|BAK06496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 213/446 (47%), Gaps = 20/446 (4%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+A + S+ + L K+ EG + ++ + LR + + +AL+L +W+ K ++
Sbjct: 95 NAGEGSVSAVLNKWLREGRETRSVDLERYVKELRRYKRHSQALELMDWMVHTKGMNMSYT 154
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
++A LDLI K+RGL+ AE Y + +P+ + + LL + +KA +++ +M +
Sbjct: 155 NHAIRLDLIYKVRGLEAAEKYFEGLPDPAKNHRTFGALLNCYCSSKEEEKATDLYRKMDE 214
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G ++ N L+ LY +L + KKV + M+++NVK + IL+ N +
Sbjct: 215 LGISSSTLPINNLMSLYMKLGQHKKVCSLFEEMKEKNVKPDNLTCCILMTSLAALNKIDD 274
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLL 239
++QV++ M+ + S + LA Y S G EKAE+ LK++EG ++ R L+
Sbjct: 275 VEQVLKEMEEKDGVLGWSAYSTLASIYQSAGLVEKAESALKKLEGLVQDRDGRQPFDFLM 334
Query: 240 PLYAELGKADQVARIWKLCESN-PWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LYA +G +V R+W + ++ P + + ++A KLN + + VF+ +
Sbjct: 335 SLYASVGNLSEVKRVWGVVKATFPKVTNTSYFSMLQALLKLNDADYMKQVFEEWESNHEF 394
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE------- 349
K + + + + M + + L ++ E G + + ++ G+
Sbjct: 395 YDAKLTNVMTRAHLKNGMAKEAELLWEKAKEKGACFDSKTCELFLDHYMVAGDMKSALNW 454
Query: 350 VEKADSILLKAQQQNKFK-PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
VE + K + ++ K P FS Y + ++ D+ E+ +R +G + K +
Sbjct: 455 VENVTKLPKKTAKLDQDKIPKFSKY------FEEQKDVQGAERFCRCLRALGCI-DGKAY 507
Query: 409 QTLVQAYINAKTPAYGIRDRMRADNV 434
++L++ Y+ A + +R +++ D +
Sbjct: 508 ESLLRTYLAAGETSRSLRQQIKDDKI 533
>gi|242034057|ref|XP_002464423.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
gi|241918277|gb|EER91421.1| hypothetical protein SORBIDRAFT_01g017970 [Sorghum bicolor]
Length = 496
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 178/374 (47%), Gaps = 37/374 (9%)
Query: 16 AEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRG 75
A N L E+ + LR R + +AL++SEW+ + F+ +D+A LDLI ++ G
Sbjct: 69 ARPRNRLRAVELQRIVRELRKRHRHRQALEVSEWMNLKGHVKFLPKDHAIHLDLIGQVHG 128
Query: 76 LQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQL 134
+ AE+Y + + + E Y LL NC V KA F MK+ GF ++ + N L
Sbjct: 129 VGAAETYFNNLSDKDKTEKPYGALL-NCYTRELLVDKALAHFQNMKELGFVFSALSYNNL 187
Query: 135 LILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG- 192
+ LY + + ++V V+ M+++ + FSY+I I+ G D G++ +E M+ E
Sbjct: 188 MGLYTNIGQHERVPMVMAEMKRDGIVPDNFSYRICINSYGIRADFFGLENTLEEMECEPQ 247
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
I D +T A++A +Y+ G +EKA + L++ E K+ L+ LY LG +V
Sbjct: 248 IVVDWNTYAVVASNYIKGYLREKAYSALRKAEAKMDKKDGDAYGHLISLYGHLGDKLEVK 307
Query: 253 RIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADH 312
R+W L N C K+ K YT +L V
Sbjct: 308 RLWALHMLN-----C---------------------------KRYINKDYTNMLAVLVKL 335
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
+++ +DL+K+ S + L+ + + G ++KA+++L ++ K P +S
Sbjct: 336 DEITEAEDLLKEWESSKNAFDFQVPNVLLTGYRQKGLLDKAETLLDGFLKKGK-TPTSTS 394
Query: 373 YMLIMDQYAKRGDI 386
+ ++ YA++GD+
Sbjct: 395 WWIVAIGYAEKGDV 408
>gi|302801570|ref|XP_002982541.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
gi|300149640|gb|EFJ16294.1| hypothetical protein SELMODRAFT_421992 [Selaginella moellendorffii]
Length = 487
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 201/421 (47%), Gaps = 60/421 (14%)
Query: 20 NDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKA 79
+D R+ + + +A LR R + +ALQ+S W+ +++ +D L L ++ ++A
Sbjct: 99 SDRLRSYLRVIIARLRRRSRFLQALQISNWMFHDRRFTVATQDLVMRLYLTSRSGLFEEA 158
Query: 80 ESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK 139
E + ++ + R E Y LL+ + +V +AE+++ RMK++G + N +LI+YK
Sbjct: 159 EKILAEVHFTQRNEWAYLALLSGYASRRHVTRAEKLWRRMKERGLTKSPHGYNNMLIMYK 218
Query: 140 RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
R +K + +L Q ++++ G+ PD++T
Sbjct: 219 R-------------KKLHSRLRQLFVEMVLS---------------------GVVPDATT 244
Query: 200 QAIL--AKHYVSG--GRKEKAEAMLKEMEGDNLKEHRW-TCRLLLPLYAELGKADQVARI 254
++ A+ + G G +++A + +E NL W T +++ +Y LG + +
Sbjct: 245 FLVILSAREQIGGFQGIEKRARHAMANLEILNLP---WFTMEVVMRVYGFLGDLEGGGK- 300
Query: 255 WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
DV + EA+ + +EA+F++ K + + +++ Y M
Sbjct: 301 ----------DVEESPAEAFSMAGAMGTSEAIFQKTGNETKDSDLQRHYVMIEAYCREGM 350
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP-----M 369
K + L++++ G P A++++++ ++ ++++A + + N+F +
Sbjct: 351 TGKAQGLLRKLIAKGRSPAPFAFNSIIQCFLKDKQLDRALELFYVSL--NRFGTRQTLAL 408
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRM 429
S + IM+ YAK GD+++ E+I H+ ++ Y + + + L++ Y+N++ PA GI DR
Sbjct: 409 GPSILGIMEVYAKAGDVNAAEQIVHKCQECHYFSDVRLYNALLKVYLNSQVPATGIEDRF 468
Query: 430 R 430
R
Sbjct: 469 R 469
>gi|223974825|gb|ACN31600.1| unknown [Zea mays]
Length = 515
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 212/447 (47%), Gaps = 24/447 (5%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
A + S+ L K+ EG ++ + LR + + AL+L +W+ + ++ +
Sbjct: 60 AGEGSVSRVLNKWVREGGATRSDDLVKHVKELRKYKRHAHALELMDWMVNARGMNMSHTN 119
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
+A L+LI K+RGL+ AE+Y +P+ + Y +LL+ + +KA ++ +M +
Sbjct: 120 HAIRLELIYKVRGLEAAENYFANLPDPAKNHRTYGSLLSCYCSAKMEEKATNLYRQMDEL 179
Query: 123 GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G ++ N L+ LY +LD+ +KV + M+ +NVK + IL+ N + +
Sbjct: 180 GIWSSTLPINNLMSLYMKLDQYRKVVSLFEEMKLKNVKPNSLTCCILMTSYAALNKIDDI 239
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLLP 240
+++++ M + + S + LA YV+ G+ KAE+ LK++EG + + R LL
Sbjct: 240 EELLKEMVEKDVTLGWSAYSTLASIYVNAGQFGKAESALKKLEGLISAHDDRQPFDFLLS 299
Query: 241 LYAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LYA LG +V R+W + +S + V + + A KLN ++ + ++ ++
Sbjct: 300 LYASLGNLSEVNRVWNVIKS-KFSKVTNTSYLGMLHALYKLNDIDRMKQIYMEWESNYET 358
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE------- 349
K +++ + M + + LV+++ E+G + + H G E
Sbjct: 359 FDVKLTNMMIRSHLKVGMTEEAEMLVEKVKENGAEFDTKTCELFLD-HYMGTEDMNSALN 417
Query: 350 -VEKADSILLKAQQQNKFKPM-FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+E + KA++ ++ + F Y + + D E+ + +R +G + K
Sbjct: 418 WLENMTKLSKKAEKLDQDRIYKFQKY------FEEHKDADGAERFCNCLRTLGCIDG-KA 470
Query: 408 FQTLVQAYINAKTPAYGIRDRMRADNV 434
+++L++ Y+ A + +R +++ D V
Sbjct: 471 YESLLRTYLAAGKKSCSLRQQIKNDKV 497
>gi|357140786|ref|XP_003571944.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Brachypodium distachyon]
Length = 497
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 201/439 (45%), Gaps = 13/439 (2%)
Query: 4 PDISIHSTLTKYA-EEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
P + + L ++A E + + E+ + L R + AL++S W+ + D
Sbjct: 47 PRLQLTPVLEQWAFAEDRPVEKHELQAIIKKLIRLRRFSHALEMSMWMTDRRYFPLKPGD 106
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
A L+LI+K+ GL+ A Y + + + Y +LL V++AE+ F M++
Sbjct: 107 VAYRLELISKVHGLKSAVEYFGGLSKEIKKSQCYGSLLKCYAEAKFVEEAEKFFGEMQEM 166
Query: 123 GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G ++S+ N ++ LY + +KV + ME+ +K F+ IL+ + S DL G+
Sbjct: 167 GM-MSSYPYNVMMKLYWETGQVEKVRTMYRAMEESGIKPDLFTIDILLTVYKASGDLEGI 225
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRWTCRLLLP 240
++V+E K + AI+A ++ G + KA L+E E + K R LL
Sbjct: 226 EEVLEKAKPRENLVGWHSYAIVASAFMKAGLQGKALQALQESEKRIDPKNGRVAYGFLLS 285
Query: 241 LYAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ A+ G +V RIW + +S + C M I A K+N +EAE F+ +
Sbjct: 286 MCADSGMRSEVDRIWDVYKSK--VPTCNSMYMCRISALLKMNDTDEAEKAFREWESRFVH 343
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ LL Y ++ K + LV + G W L + G+V KA +
Sbjct: 344 HDFRLINLLLNGYCAEGLMEKAEALVDEAITKGRMPYANTWYKLAAGFFKDGQVLKAVDL 403
Query: 357 LLK--AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K A + ++P ++ ++ +D + ++ ++ + E++ +R + + R + +L++
Sbjct: 404 TRKALASATSGWEPDLTNVLMSLDHFMEQKNVEAAEEMASLLRSLVPLTR-DVYHSLLKT 462
Query: 415 YINAKTPAYGIRDRMRADN 433
Y++A P + DRM D
Sbjct: 463 YVHAGMPVSDLLDRMNEDG 481
>gi|125559056|gb|EAZ04592.1| hypothetical protein OsI_26742 [Oryza sativa Indica Group]
Length = 402
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 165/355 (46%), Gaps = 18/355 (5%)
Query: 58 FIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVF 116
F+ +D+A LDLI ++ G AE+Y +P+ + E Y LL NC V+K+ F
Sbjct: 9 FLPKDHAVHLDLIGEIHGSSAAETYFNNLPDKDKTEKPYGALL-NCYTRELLVEKSLAHF 67
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
+MK+ GF ++ N ++ LY L + +KV V+ M+ + FSY+I I+ G
Sbjct: 68 QKMKELGFVFSTLPYNNIMGLYTNLGQHEKVPSVIAEMKSNGIVPDNFSYRICINSYGTR 127
Query: 176 NDLTGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRW 233
D GM+ +E M+ E I D +T A++A +Y+ G +EKA + LK+ E N+K+
Sbjct: 128 ADFFGMENTLEEMECEPKIVVDWNTYAVVASNYIKGNIREKAFSALKKAEAKINIKDSD- 186
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPWLDV-----CMAAIEAWGKLNKVEEAEAVFK 288
+ L+ LY LG +V R+W L SN + M A+ KLN++EEAE + K
Sbjct: 187 SYNHLISLYGHLGDKSEVNRLWALQMSNCNRHINKDYTTMLAVLV--KLNEIEEAEVLLK 244
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
+ + LL Y +L K + L+ + G +W + + E G
Sbjct: 245 EWESSGNAFDFQVPNVLLTGYRQKDLLDKAEALLDDFLKKGKMPPSTSWAIVAAGYAEKG 304
Query: 349 EVEKADSILLKA----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
+ KA + A + P +I+ GD+ E IF + +V
Sbjct: 305 DAAKAYELTKNALCVYAPNTGWIPRPGMIEMILKYLGDEGDVEEVE-IFVDLLKV 358
>gi|413953409|gb|AFW86058.1| hypothetical protein ZEAMMB73_674343 [Zea mays]
Length = 626
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 187/432 (43%), Gaps = 59/432 (13%)
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
D A LDLIAK RG+ AE Y +PE+ + + Y LL + +KAE + +MK+
Sbjct: 178 DQAIRLDLIAKSRGIAAAEKYFLDLPETSKTHLTYGALLNSYCKELMTEKAESLMEKMKE 237
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
F T+ + N L+ +Y ++++ +KV ++ M+ ++V F+Y + + D+ G
Sbjct: 238 LNFAFTAMSFNSLMTMYTKVNQAEKVPSIIQDMKADDVLPDVFTYNVWMRALAALKDIPG 297
Query: 181 MDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+++V+E MK +G + PD +T + LA YV G EKAEA LKE+E N + L+
Sbjct: 298 VERVIEEMKRDGRVAPDWTTYSNLASIYVEAGMFEKAEAALKELEKRNTSNDIEAYQFLI 357
Query: 240 PLYAELGKADQVARIWK-LCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRM------ 290
LY +V R+W+ L NP + + I+ L + AEA FK
Sbjct: 358 TLYGRTQNLVEVHRVWRSLKRDNPRMANMSYLNMIQVLANLKDLSAAEACFKEWEARHIH 417
Query: 291 ------------------------------------SKTWKKLSTKH-------YTALLK 307
+T + L KH A++K
Sbjct: 418 PPKTNTKGSGADNTPGADPKSPSNPPNNQSGTKETGDETAEDLQPKHPKYDIRVANAMIK 477
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK----ADSILLKAQQQ 363
Y ML K + K+ G + W+ ++ +++ G+++ AD + K
Sbjct: 478 AYITEGMLDKAVAMKKRAKMRGGRLNAKTWEIFMEHYLKTGDLKMAHWCADRAMKKGHSS 537
Query: 364 NK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPA 422
+ + P + +M + + D+ E+ +++V F+ LV+ Y A
Sbjct: 538 GRIWVPPPAVTETLMSYFEENKDVDGAERYVGALKKVQKDLGAPVFEPLVRTYAAAGKKF 597
Query: 423 YGIRDRMRADNV 434
G+R R++ +NV
Sbjct: 598 PGMRQRLKIENV 609
>gi|242057165|ref|XP_002457728.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
gi|241929703|gb|EES02848.1| hypothetical protein SORBIDRAFT_03g012450 [Sorghum bicolor]
Length = 530
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 211/445 (47%), Gaps = 20/445 (4%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
A + S+ L K+ EG E+ + LR + + AL++ +W+ + ++ +
Sbjct: 76 AGEGSVSRVLNKWVREGGAPRSEELVKHVKELRKYKRHAHALEVMDWMVNARGMNMSITN 135
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
+A LDLI K+RGL+ AE+Y +P+ + Y LL+ + +KA ++ +M +
Sbjct: 136 HAIRLDLIYKVRGLEAAENYFANLPDPAKNHRTYGALLSCYCSAKMEEKATYLYRQMDEL 195
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
GF + N L+ LY +LD+ + D L M+ +N+K + IL+ SN + +
Sbjct: 196 GFWSGTLPINNLMSLYMKLDQHRKVDSLFEEMKVKNIKPDSLTCCILMTSYAASNKIDAI 255
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLLP 240
+++++ M + + S + LA YV+ G+ EKAE+ LK++EG ++ R L+
Sbjct: 256 EELLKEMVEKDVSLGWSAYSTLASIYVNAGQVEKAESALKKLEGLIGAEDGRQPFDFLMS 315
Query: 241 LYAELGKADQVARIWKLCES--NPWLDVC-MAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
LYA LG ++ R+W + ++ + ++ + + A KLN ++ + ++ ++
Sbjct: 316 LYASLGNLSEINRVWDVIKAKFSTVTNISYLGMLHALYKLNDIDRMKQIYMEWESNYQTY 375
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE-------V 350
+ +++ + M + + L ++ E G + + ++ G+ V
Sbjct: 376 DVRLTNMMIRGHLRLGMSEEAETLREKAKEKGVEFDSKTCELFLDHYMGKGDMNSALNWV 435
Query: 351 EKADSILLKAQQQNKFKPM-FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
E + KA + ++ + F Y + + D S E+ + +R +G + K ++
Sbjct: 436 ENMTKLPKKAGKLDQDRIYKFQKY------FEEHKDADSAERFCNCLRMLGCIDG-KAYE 488
Query: 410 TLVQAYINAKTPAYGIRDRMRADNV 434
+L++ Y+ A + +R +++ D +
Sbjct: 489 SLLRTYLAAGKKSCSLRQQIKNDKI 513
>gi|224138182|ref|XP_002322750.1| predicted protein [Populus trichocarpa]
gi|222867380|gb|EEF04511.1| predicted protein [Populus trichocarpa]
Length = 516
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 188/405 (46%), Gaps = 17/405 (4%)
Query: 5 DISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYA 64
++S+ L K+ +EG + I + LR R Y AL++S W+ + L R A
Sbjct: 59 NVSVIPVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDKRYLALTSRAVA 118
Query: 65 SCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAG-NNVKKAEEVFNRMKDKG 123
LDLI+K+ G+++ E+Y IP +G Y LL NC A +V+KAE V RM++ G
Sbjct: 119 VRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALL-NCYAYVKSVEKAEAVMQRMRELG 177
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F +L LY + + D L+ ME+ + +F+Y I + ++D G++
Sbjct: 178 FARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISFDKFAYCIRLSSYAAASDSEGLE 237
Query: 183 QVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR-LLLP 240
+ ++ ++S+ + D +T A +A Y G +KA MLK E E R T L+
Sbjct: 238 KTLKRIESDPNVVLDWATYATVANGYSKVGLLDKALEMLKRCERLITGERRSTPYDYLMT 297
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
YA G + V R+W+L + ++ I + K + +E AE +F+ +KL
Sbjct: 298 QYATTGTKEDVLRVWELHKRYVGNRKNISVITSLLKFDDLESAEKIFEEWES--QKLCDD 355
Query: 301 HYTA--LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA----- 353
L+ Y+ +L K + L+++ +G W L K +++ + KA
Sbjct: 356 IIIPNFLVDAYSRKGLLEKAEMLLQRTMSNGTKPNANTWYLLAKGYLQHNQTPKAVEAMK 415
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ I+L + +P S++ + GD+ + E + +R+
Sbjct: 416 EMIVLSGPRS---RPSTVSWVACLQHLKDSGDMDNAEGFINLLRE 457
>gi|224084592|ref|XP_002307350.1| predicted protein [Populus trichocarpa]
gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 191/445 (42%), Gaps = 11/445 (2%)
Query: 11 TLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLI 70
L + GN + +++ L L + Y +AL++ +W+E +A ++LI
Sbjct: 65 VLQDWINNGNKVKLSQLNLISKQLLKSKRYKQALEILQWMENQNNFRITPGHHALMMELI 124
Query: 71 AKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFA 130
K+ GL KA Y ++IP S + LL V ++ KAE ++ G VT
Sbjct: 125 VKVNGLNKAGEYFERIPGSGSKKAASLPLLHGYVKERDISKAESFMIKLSSSGLLVTPHP 184
Query: 131 CNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMK 189
N+++ LY L + +KV V+ M++ + SY + + G+ ++ + V + M
Sbjct: 185 YNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNVLSYNLWMGAFGEVFEVAKAEMVYKEMV 244
Query: 190 S-EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
S E + ST A LA Y+ G +KA +LK+ E R L+ LY+ L
Sbjct: 245 SDENVGVGWSTLASLANVYIKAGFVDKALLVLKDAEMKLSTNGRLGYFFLITLYSSLKNK 304
Query: 249 DQVARIWKLCESNPWLDVC---MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
+ V R+W+ ++ C M I K+ + AE VF K + L
Sbjct: 305 EGVLRLWEASKAVGGRIPCADYMCVISCLVKVGDLVAAEQVFAEWETNCFKYDIRVSNVL 364
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA----- 360
L Y + ++ K + E G W+ L++ V+ +++KA + K
Sbjct: 365 LGAYVRNGLMGKAESFHLHTVERGGCPNYKTWEILMEGWVKSQKMDKAIDAMKKGFSVLK 424
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
++ ++P S M I + + K G+ + +G VA ++ ++ Y+NA+
Sbjct: 425 VERCDWRPSHSILMAIAEHFEKHGNFEDANHYIKAVHGLG-VATLPLYKLFLRMYLNAQR 483
Query: 421 PAYGIRDRMRADNVFPNKALAAQVA 445
PA+ I M D + + +A VA
Sbjct: 484 PAWDILKMMEKDRIELDDETSALVA 508
>gi|195613552|gb|ACG28606.1| tetratricopeptide-like helical [Zea mays]
gi|414870858|tpg|DAA49415.1| TPA: tetratricopeptide-like helical [Zea mays]
Length = 517
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 211/471 (44%), Gaps = 21/471 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P I + L ++ +EG+ + I + L R + AL+LS W+ + L D
Sbjct: 52 PSIPLSPVLEQWNQEGHTAKKFVIQAIVKKLVGLRRFAHALELSFWMTDRRHLHLSVGDV 111
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI+K+ GL+KA Y +P+ R Y +LL V V KAEE F +M++ G
Sbjct: 112 AYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYVEAKAVDKAEEHFAKMQEMG 171
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+S+A ++ LY + + ++V + ME++ VK FS + ++ + D+ G+
Sbjct: 172 M-TSSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTFSVEAMLAAYIAAEDVQGVG 230
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRWTCRLLLPL 241
+V++ A A ++ G + A L E E + K R LL
Sbjct: 231 KVLDKANPHEKLVTWHGHASAASLFMKSGMQVGAVMALVEAERRISPKSSRIAYAFLLKT 290
Query: 242 YAELGKADQVARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
Y ELG + RIW + +S P + M+ + A + N ++ AEA K W+ +
Sbjct: 291 YTELGMHAEAGRIWSVYKSKVPPCNTMYMSRLSALLRTNDIDGAEATLKE----WETVPL 346
Query: 300 KHY-----TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+++ ++ Y ++ K LV + G W L + G+V +A
Sbjct: 347 RYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYANTWYKLAGGFFKTGQVPEAV 406
Query: 355 SILLKA--QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+ KA ++P ++ ++ ++ + + D+ + E++ ++++ + R + L+
Sbjct: 407 DMTRKALDSATPPWRPDLANVLMSLNHFVDQKDVGAAEEMVSTLQKLVPLTR-DVYHCLL 465
Query: 413 QAYINAKTPAYGIRDRMRADNVFPN----KALAAQVAQVDAFRKTAVSELL 459
+ Y+ A P + +RM+ D + + + LA + +VD + + L+
Sbjct: 466 KTYVRAGKPPSDLLERMKEDGLEADEETERILAGECERVDMHPLSITNHLI 516
>gi|297809953|ref|XP_002872860.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
gi|297318697|gb|EFH49119.1| hypothetical protein ARALYDRAFT_490379 [Arabidopsis lyrata subsp.
lyrata]
Length = 500
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 152/293 (51%), Gaps = 10/293 (3%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
+ TL + EG + + E+ +LR R +AL++ EW+E K++ F D+A L
Sbjct: 54 MEETLNQLVMEGVPVKKHELIRYAKDLRKFRQPQRALEIFEWME-RKEIVFTGSDHAIRL 112
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
DLIAK +GL+ AE+Y + +S + + Y +LL KA+ F M D
Sbjct: 113 DLIAKTKGLEAAETYFNSLNDSIKNQSTYGSLLNCYCVEKEEDKAKAHFENMVDLNHVSN 172
Query: 128 SFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVE 186
S N L+ +Y R+ + +KV +++ M+++N+ +Y + I G DL G+++V++
Sbjct: 173 SLPFNNLMAMYLRIGQSEKVPALVVAMKQKNITPCDITYSMWIQSCGSLKDLDGVEKVLD 232
Query: 187 AMKSEGIEPDSS--TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC-RLLLPLYA 243
MK+EG E SS T A LA Y+ G +KAE LK +E + + H C L+ LYA
Sbjct: 233 EMKAEG-EGISSWDTFANLAAIYIKVGLYDKAEEALKSLE-NKMNPHIRDCYHFLISLYA 290
Query: 244 ELGKADQVARIWKLCES-NPWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKT 293
+ A +V R+W L + +P ++ + ++A KLN ++ + +F T
Sbjct: 291 GIANASEVYRVWDLLKKRHPNVNNSSYLTMLQALSKLNDIDGIKKIFTEWEST 343
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 64/324 (19%), Positives = 133/324 (41%), Gaps = 24/324 (7%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK----KKVADVLLLMEKENVKLT 161
G K EE N++ +G PV ++L+ K L K ++ ++ ME++ + T
Sbjct: 48 GTRGGKMEETLNQLVMEGVPVKK---HELIRYAKDLRKFRQPQRALEIFEWMERKEIVFT 104
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+ I +D+ ++ L + ++ ++ I+ + ST L Y ++KA+A +
Sbjct: 105 GSDHAIRLDLIAKTKGLEAAETYFNSL-NDSIK-NQSTYGSLLNCYCVEKEEDKAKAHFE 162
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQV-ARIWKLCESNPWLDVCMAAIEAW----GK 276
M N + L+ +Y +G++++V A + + + N + C W G
Sbjct: 163 NMVDLNHVSNSLPFNNLMAMYLRIGQSEKVPALVVAMKQKN--ITPCDITYSMWIQSCGS 220
Query: 277 LNKVEEAEAVFKRMSKTWKKLST-KHYTALLKVYADHKMLSKGKDLVKQMAES-GCHIGP 334
L ++ E V M + +S+ + L +Y + K ++ +K + HI
Sbjct: 221 LKDLDGVEKVLDEMKAEGEGISSWDTFANLAAIYIKVGLYDKAEEALKSLENKMNPHIRD 280
Query: 335 LAWDALVKLHVEGGEVEKADSI--LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ L+ L+ + + LLK + N SSY+ ++ +K DI +KI
Sbjct: 281 -CYHFLISLYAGIANASEVYRVWDLLKKRHPNVNN---SSYLTMLQALSKLNDIDGIKKI 336
Query: 393 FHRMRQVGYVARFKQFQTLVQAYI 416
F + + + +Y+
Sbjct: 337 FTEWESTCWTYDMRMANVAISSYL 360
>gi|224138178|ref|XP_002322749.1| predicted protein [Populus trichocarpa]
gi|222867379|gb|EEF04510.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 175/366 (47%), Gaps = 16/366 (4%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
I+I L + EG +++ ++ + LR + Y AL++S W+ + + +D A
Sbjct: 73 ITISLFLNHWVLEGQPVNKNQLREFIKELRFHKRYAHALEISTWMTDSGYFELASQDVAV 132
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVA-GNNVKKAEEVFNRMKDKGF 124
LDLI+K+ G+++A+ P+ + VY LL NC A V+KAE V MK GF
Sbjct: 133 QLDLISKVHGIEQAQKLFNNTPQHLKVLKVYSALL-NCYAKAKLVEKAESVVQEMKSLGF 191
Query: 125 PVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
T N +L Y+ + K+ ++ ME+ + +F++ I + +D+ G+++
Sbjct: 192 ANTLLVYNVILNFYYQTGNPDKINSLMQEMEQNGIGCDKFAHSIQLSAYASVSDIVGIEK 251
Query: 184 VVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR-LLLPL 241
+ M+S+ + D ++ AK Y+ G +KA ML++ E + R T L+ L
Sbjct: 252 TLAKMESDPNVFLDWTSYTAAAKGYIKVGLVDKALEMLEKSERLVTGKRRGTAYDSLITL 311
Query: 242 YAELGKADQVARIWKLCESNP--WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
YA GK ++V RIW+L + N + + ++ I + KL+ E AE +F+ W+ +
Sbjct: 312 YAATGKTNEVLRIWELYKKNEKVYKEAYISIITSLLKLDDFENAEKIFEE----WEFQNH 367
Query: 300 KHY-----TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
Y L+ Y+ ++ K + L+ + G W L +++ G+ KA
Sbjct: 368 SCYDIHIPNFLIDAYSRKGLVEKAETLIDRAISKGGEPNAKTWYHLATGYLQNGQTLKAV 427
Query: 355 SILLKA 360
+ KA
Sbjct: 428 EAMKKA 433
>gi|115436124|ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|57899052|dbj|BAD87826.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa Japonica Group]
gi|215694668|dbj|BAG89859.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706899|dbj|BAG93359.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 211/441 (47%), Gaps = 12/441 (2%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
A + S+ + K+ EG + A++A + LR + + AL+L EW+ K ++ +
Sbjct: 67 AGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMVNTKGMNMSYTN 126
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVK-KAEEVFNRMKD 121
+A LDLI K+RG++ AE Y +P+ + Y LL NC ++ KA +++ +M +
Sbjct: 127 HAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALL-NCYCSAKMEDKATDIYRKMDE 185
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G ++ N L+ LY ++ + +KV + M+ +NVK + +L+ N +
Sbjct: 186 LGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSSYAALNKIDT 245
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLL 239
+ +V++ M+ + + S + LA YV+ E+AE+ LK++E +++ R L+
Sbjct: 246 VGEVLKEMEEKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDVQAGRQPFDFLM 305
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
LYA +G +V R+W L ++N + V + ++A KLN + + +++ ++
Sbjct: 306 SLYASVGNLSEVNRVWNLIKAN-FQKVTNTSYLGMLQALYKLNDDDRMKQIYEDWESNYE 364
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ + + + + + + + L +++ E G + ++ ++ G++ A +
Sbjct: 365 NYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHYMGKGDMTSALN 424
Query: 356 ILLKAQQQNKFKPMFSSYML--IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ + + K + + + + D+ E+ + +R G + K +++L++
Sbjct: 425 WVENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLRTSGCIDG-KAYESLLR 483
Query: 414 AYINAKTPAYGIRDRMRADNV 434
Y+ A + IR ++ D +
Sbjct: 484 TYLAAGKTSRSIRQMIKEDKI 504
>gi|302789381|ref|XP_002976459.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
gi|300156089|gb|EFJ22719.1| hypothetical protein SELMODRAFT_416459 [Selaginella moellendorffii]
Length = 509
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 208/452 (46%), Gaps = 17/452 (3%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
+ ++ EGN ++ + + LR+R+ Y +AL +W+ K + F + LDL +
Sbjct: 52 IKQWIREGNSVTSCGLDRVVRRLRSRKRYLQALMAVDWVANEKVIPFGYHETLQRLDLCS 111
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
+ + + +++P+ +RGE Y LL + ++ AE+ + +G + S
Sbjct: 112 RCHHVTRTLLLFRRLPKQWRGEDAYCILLEMYYKRDMLEDAEKTMQEL--RGIGIKSLQP 169
Query: 132 NQLLILYKRLD--KKKVADVLLLMEKENVKLTQFSYKILIDIKGQ-SNDLTGMDQVVEAM 188
L++ + +L + + ++ ++ + L + Y IL+ + D+ ++ V+ M
Sbjct: 170 YHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFYTILLAARDSFGGDMVAVEDVLAEM 229
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME----GDNLKEHRWTCRLLLPLYAE 244
+ G++ D+ +A Y+ G + K+E +L+ +E K R +L ++ +
Sbjct: 230 EGRGLKLDAVGCLAVAGIYLRSGLRHKSERVLQRLEKSLKSGEFKYSNSIRRRMLAMFGK 289
Query: 245 LGKADQVARIWKLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
LG D V RIW E + V + IEA+G++ K++EAE ++ R+ + + +
Sbjct: 290 LGDRDAVDRIWHSIERSASTTVEDFIFGIEAFGRVGKMDEAEDMYMRVG--CNSCNPRLH 347
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA----DSILL 358
A L V + + + LV++M C + + + L+K++++ G+V +A +S+
Sbjct: 348 NAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYHLLIKVYLKAGDVSRATLAFESLRS 407
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ +P + ++++ + GD+ ++E++ + + G+ F +LV+ Y
Sbjct: 408 AFGKLEWPRPSSETLAVMLEFFVGTGDVQASERLVKKWMEDGFPLSAAVFHSLVRVYAKG 467
Query: 419 KTPAYGIRDRMRADNVFPNKALAAQVAQVDAF 450
RM + V P + + Q+ F
Sbjct: 468 GAGVDNFPGRMLSAGVEPTRETEQLLRQISTF 499
>gi|255545872|ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 496
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 197/443 (44%), Gaps = 10/443 (2%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ +P ++I S L K+ + G+ ++ +++ L + Y AL++ W+ET K
Sbjct: 38 LKSPGLNITSILQKWIDNGHKVTVSQLRYINGLLVKSKRYKHALEIFTWMETQKNFRMSV 97
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIP-ESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
DYA L+LI K+ G+++AE Y IP +S + LL V +V KAE + ++
Sbjct: 98 SDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHGYVKVKDVVKAEALMMKL 157
Query: 120 KDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
+ G V + N+++ LY + +KVA V+ M++ + L SY + + G+ + +
Sbjct: 158 YNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIALNLLSYNLWMSSYGEVSKV 217
Query: 179 TGMDQVV-EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
++ V E + + +E ST A LA Y G +KA LK E H
Sbjct: 218 VKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKALLALKNAEKILSTSHLLGYFF 277
Query: 238 LLPLYAELGKADQVARIWKLCESNPWLDVC---MAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ Y+ L + V R+W+ C+ C M + K+ + EAE VF+
Sbjct: 278 LMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKVGDLLEAEKVFRDWELNC 337
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+K + LL Y +++K + L + G + L++ V+ +++KA
Sbjct: 338 RKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPNYKTLEILMEGWVKSQKMDKAI 397
Query: 355 SILLKA---QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+ +A + ++P M I + + + + +G VA ++ L
Sbjct: 398 DAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQVIHHLG-VASLPLYKVL 456
Query: 412 VQAYINAKTPAYGIRDRMRADNV 434
++ +++A+ A+ I M D +
Sbjct: 457 LRMHLHAQRAAFDILKMMEKDKI 479
>gi|125525544|gb|EAY73658.1| hypothetical protein OsI_01545 [Oryza sativa Indica Group]
Length = 522
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 211/441 (47%), Gaps = 12/441 (2%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
A + S+ + K+ EG + A++A + LR + + AL+L EW+ K ++ +
Sbjct: 67 AGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALELMEWMVNTKGMNMSYTN 126
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVK-KAEEVFNRMKD 121
+A LDLI K+RG++ AE Y +P+ + Y LL NC ++ KA +++ +M +
Sbjct: 127 HAIRLDLIYKVRGIEAAELYFAGLPDPGKNHKTYGALL-NCYCSAKMEDKATDIYRKMDE 185
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G ++ N L+ LY ++ + +KV + M+ +NVK + +L+ N +
Sbjct: 186 LGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLTCCLLMSSYAALNKIDT 245
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLL 239
+ +V++ M+ + + S + LA YV+ E+AE+ LK++E +++ R L+
Sbjct: 246 VGEVLKEMEEKKVALGWSAYSTLASLYVNANMVEEAESALKKLESLIDVQAGRQPFDFLM 305
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
LYA +G +V R+W L ++N + V + ++A KLN + + +++ ++
Sbjct: 306 SLYASVGNLSEVNRVWNLIKAN-FQKVTNTSYLGMLQALYKLNDDDRMKQIYEDWESNYE 364
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ + + + + + + + L +++ E G + ++ ++ G++ A +
Sbjct: 365 NYDARLTNMMTRAHLRNGLTKEAELLWEKVKEKGAEFDSKTCELFLEHYMGKGDMTSALN 424
Query: 356 ILLKAQQQNKFKPMFSSYML--IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ + + K + + + + D+ E+ + +R G + K +++L++
Sbjct: 425 WVENMTKLPRKKSKLDQEKISCFLKYFEEHKDVEGAERFLNCLRTSGCIDG-KAYESLLR 483
Query: 414 AYINAKTPAYGIRDRMRADNV 434
Y+ A + IR ++ D +
Sbjct: 484 TYLAAGKTSRSIRQMIKEDKI 504
>gi|147803609|emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 174/389 (44%), Gaps = 15/389 (3%)
Query: 23 SRAEIALAMANLRTRRMYGKAL-QLSEWLET-NKKLDFIERDYASCLDLIAKLRGLQKAE 80
S E L A ++ + +AL ++ EW+ ++ D A LDLIAK+ G+ AE
Sbjct: 297 SDKEDRLVWAREKSGTFFVEALYKVYEWMNNRGERFRLSSSDAAIQLDLIAKVCGVSSAE 356
Query: 81 SYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR 140
Y ++P++ + + +Y LL V KAE + ++++KG+ T N ++ LY
Sbjct: 357 DYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATTPLPFNVMMTLYMN 416
Query: 141 LDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE-GIEPDSS 198
L + KV ++ M +N++L +SY I + M+QV E MK E I P+ +
Sbjct: 417 LKELDKVQSMISEMMNKNIQLDIYSYNIWLS---SCESTERMEQVFEQMKLERTINPNWT 473
Query: 199 TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC 258
T + +A Y+ G+ EKAE LK++E R L+ LY G +V R W +
Sbjct: 474 TFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLISLYGSTGNKAEVYRAWNIY 533
Query: 259 ESN----PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
+S P L A I + ++ +E AE +++ + LL Y
Sbjct: 534 KSKFPNIPNLGY-HALISSLVRVGDLEGAEKIYEEWLSVKSSYDPRIGNLLLGCYVKEGF 592
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK---AQQQNKFKPMFS 371
L K + + M E+G W+ L + + ++ A S + A+ N +KP
Sbjct: 593 LEKAEGFLDHMIEAGGKPNSTTWEILAEGNTGVKKISDALSCFKRAVLAEGSNGWKPKPV 652
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ +D + D + E + +RQ+G
Sbjct: 653 NVSAFLDLCEEEADTATKEALMGLLRQMG 681
>gi|223949005|gb|ACN28586.1| unknown [Zea mays]
Length = 396
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 144/307 (46%), Gaps = 17/307 (5%)
Query: 58 FIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNN-VKKAEEVF 116
F+ +D+A LDLI ++ G++ AE+Y + + + E Y LL NC V KA F
Sbjct: 9 FLPKDHAIHLDLIGQIHGVEAAETYFNNLSDKDKTEKPYGALL-NCYTRELLVDKALAHF 67
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
MK+ GF ++ N L+ LY R+ + ++V V+ M+ + FSY+I I+ G
Sbjct: 68 RNMKELGFVFSTLPYNDLMGLYTRIGQHERVPSVMAEMKSNGIVPDNFSYRICINSYGTR 127
Query: 176 NDLTGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
D G++ +E M+ E I D +T A++A +Y+ G +EKA + L + E K+
Sbjct: 128 ADFFGLENTLEEMECEPQIVVDWNTYAVVASNYIKGDLREKAYSALSKAEAKLDKQDPDA 187
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVC--------MAAIEAWGKLNKVEEAEAV 286
R L+ LY LG + R+W + SN C M + KL+++ EAE +
Sbjct: 188 YRHLISLYGNLGDKSEAKRLWAVQMSN-----CKRYINRDYMNMLSVLVKLDEITEAEDL 242
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
K + + LL Y +L K + L+ + G +W + + E
Sbjct: 243 LKEWESSQNSFDFRVPNVLLTGYRQKALLDKAEMLLDGFLKKGKTPPSTSWGIVAIGYAE 302
Query: 347 GGEVEKA 353
G+V KA
Sbjct: 303 KGDVAKA 309
>gi|449431834|ref|XP_004133705.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
gi|449478158|ref|XP_004155237.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Cucumis sativus]
Length = 492
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 180/385 (46%), Gaps = 17/385 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P+ ++ L ++ EEG ++ E+ + +LRT R Y +AL++SEW+ + RD+
Sbjct: 58 PECTVVPVLNQWIEEGRNIKDFELRRIVRDLRTCRRYRQALEVSEWMCSKGLFSLTTRDF 117
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI ++RGL AE Y + +Y LL V + K+ +MK+ G
Sbjct: 118 AIQLDLIGQVRGLDSAEKYFGSVSNQKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMG 177
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ N ++ LY + KV +VL M++ V FSY+I I G +D+ M+
Sbjct: 178 LASSPLCYNDIMCLYLNTGQADKVPNVLSEMKENGVLPDNFSYRICISSYGARSDVISME 237
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
V++ M+ + I D +T +++A ++ G +KA L++ E D + E L+
Sbjct: 238 NVLKEMEGQTHISMDWTTYSMVAGFFIKAGMHDKAMNYLRKCE-DKVDEDALGFNHLISH 296
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
Y LG ++V R+W L + + I G L K+E E + + W+ S +
Sbjct: 297 YTNLGHKNEVMRLWALLKKGK-KQLNRDYITMLGSLVKLELLEEAENLVME-WES-SCQC 353
Query: 302 Y-----TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
Y +L Y+ ++ K + +++ + +G P +W + ++E +EKA
Sbjct: 354 YDFRVPNVVLIGYSQKGLIEKAEKMLRNIIVNGMIPSPNSWGIIASGYLEKQNLEKAFEC 413
Query: 357 L---LKAQQQNKF---KPMFSSYML 375
+ L + QNK KP S +L
Sbjct: 414 MKEALAVKGQNKVWRPKPNVLSSIL 438
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
G++ ++ AE F +S +K K Y ALL Y ++ K +++M E G P
Sbjct: 125 GQVRGLDSAEKYFGSVSN--QKEIGKLYGALLNCYVREGLIDKSLAHMQKMKEMGLASSP 182
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
L ++ ++ L++ G+ +K ++ L ++N P SY + + Y R D+ S E +
Sbjct: 183 LCYNDIMCLYLNTGQADKVPNV-LSEMKENGVLPDNFSYRICISSYGARSDVISMENVLK 241
Query: 395 RMRQVGYVA 403
M +++
Sbjct: 242 EMEGQTHIS 250
>gi|115449217|ref|NP_001048388.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|47497029|dbj|BAD19082.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497238|dbj|BAD19283.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537919|dbj|BAF10302.1| Os02g0796400 [Oryza sativa Japonica Group]
gi|125584008|gb|EAZ24939.1| hypothetical protein OsJ_08720 [Oryza sativa Japonica Group]
Length = 517
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 186/429 (43%), Gaps = 9/429 (2%)
Query: 14 KYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKL 73
++A E +S E+ + LR R Y +AL++ W++++ D+ LDLIAK+
Sbjct: 71 RWARERGRVSPPELRRDVVRLRRARRYEQALEILSWMDSHNDFRLSPSDHMVRLDLIAKV 130
Query: 74 RGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
G +AE Y +K+ + + LL V NV+KAE ++ G PV + N+
Sbjct: 131 HGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHSFNE 190
Query: 134 LLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV-EAMKSE 191
++ LY +KV V+ LM++ N+ SY I ++ + + L + E + +
Sbjct: 191 IMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDD 250
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
+E ST LA + G+ KA A L+ E R ++ YA L D V
Sbjct: 251 MVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGV 310
Query: 252 ARIWKLCESNPWLDVC---MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
R+W+ + P M+A+ K+ + AE F KK + LL
Sbjct: 311 IRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGA 370
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK--- 365
Y + + K + L M E G H W+ L++ V+ +++KA + + K K
Sbjct: 371 YVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCH 430
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
++P I + ++G + ++ F ++ Q + +++L+ AYINA I
Sbjct: 431 WRPPLELLEAIAKYFEEQGSVEDADR-FIKVLQKFNLTSLPLYKSLLGAYINADIVPQNI 489
Query: 426 RDRMRADNV 434
+ D +
Sbjct: 490 PQMIAGDQI 498
>gi|224064562|ref|XP_002301516.1| predicted protein [Populus trichocarpa]
gi|222843242|gb|EEE80789.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 149/304 (49%), Gaps = 18/304 (5%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ A S+ TL + EG S+ + + LR + A+++ EW++ +K++F
Sbjct: 8 LGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQ-KRKMNFSH 66
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRM 119
D+A LDL AK +G+ AE+Y +P S + V Y TLL NC + +KA +F +M
Sbjct: 67 VDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLL-NCYCKELMSEKALTLFEKM 125
Query: 120 KDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
TS N L+ L+ RL + +KV ++ M++ V F+Y I + G ND
Sbjct: 126 DKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYGCLNDF 185
Query: 179 TGMDQVVEAMKSEGIEPDS-STQAILAKHYVSGGRKEKAEAMLKEME--------GDNLK 229
G+ +V++ MK++G E S +T + LA YV G +KAE+ L+++E D K
Sbjct: 186 EGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECGRDCDFQK 245
Query: 230 EHRWTC-----RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAE 284
+ R L+ LYA +V R+W +S+ ++ + L K+++ E
Sbjct: 246 KRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAKLKDVE 305
Query: 285 AVFK 288
+ K
Sbjct: 306 GILK 309
>gi|449523946|ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 461
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 191/406 (47%), Gaps = 18/406 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P+IS+ L ++ EG + + E+ + LR + + AL++S+W+ + D
Sbjct: 41 PNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADI 100
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNN-VKKAEEVFNRMKDK 122
A ++LI ++ GL++ E Y +P + V+ LL NC A V KA ++K+
Sbjct: 101 AIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALL-NCYAHEKCVDKANAFMQKIKEM 159
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGM 181
GF + N ++ LY ++ + + D LL M++ V +F+Y I I ++D G+
Sbjct: 160 GFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGI 219
Query: 182 DQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG--DNLKEHRWTCRLL 238
++++E M+S I D + I A Y G +K+ +MLK+ EG N+K+ + +
Sbjct: 220 EKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVY 279
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDV-CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
L LYA GK D++ RIW L + + ++ I + L+ ++ AE ++K
Sbjct: 280 LKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSY 339
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ L+ Y ++ K + L+ +M +W L +++ ++ +A L
Sbjct: 340 DLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETL 399
Query: 358 LKA-----QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A + N K + ++++ + D+ TEK+ + +R+
Sbjct: 400 KLAASVCPSRLNYVKEILAAFL------DGKQDVEETEKVVNLLRE 439
>gi|297835552|ref|XP_002885658.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
gi|297331498|gb|EFH61917.1| hypothetical protein ARALYDRAFT_899047 [Arabidopsis lyrata subsp.
lyrata]
Length = 737
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 194/398 (48%), Gaps = 32/398 (8%)
Query: 17 EEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGL 76
E+G L+ + + + NLR + +AL++S W+ K + I D+ + LI + GL
Sbjct: 50 EQGKQLNPSLVRGVVENLRDSQRCREALEVSNWMIVQKICNLIPEDFTTRFHLIENVFGL 109
Query: 77 QKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI 136
++A ++++ IPE+ R E +Y +LL++ V N++ KAE F +M++ G + + N +
Sbjct: 110 EEAGNFVESIPENLRNESIYNSLLSSYVRRNDLDKAESTFKKMRELGLLLRASPYNSMTS 169
Query: 137 LYKRL---DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
LY+R+ ++ KV ++L M++ N+KL + + + + + M++ + + EG
Sbjct: 170 LYRRIPHGNRCKVDEILREMKESNIKLDRDTVNNALRVYADVTHIATMEKFL--AEWEGN 227
Query: 194 EP-DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
P D T+ +AK Y+ G K KA+ ML+ E L++ + + L+ LY E G V
Sbjct: 228 TPLDWLTRLDMAKAYLRSGFKGKAKEMLRRTE--ELRDPK-SYEELMRLYGEAGGRKDVY 284
Query: 253 RIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK----KLSTKHYTALL 306
R+W L + S + A I + KL+ + AE + K W+ + T L+
Sbjct: 285 RVWDLYKKLSKKDNEGFRALIGSLLKLDDINGAEEFY---YKEWECSGLPFDVRIPTMLV 341
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD-----------S 355
Y + M+ K L+K++ ++ + P+ L L +G V+ ++ +
Sbjct: 342 SSYREKGMVEKADKLIKEIMKNEESVKPIT-PLLESLERKGNVVKPSELRDLIKNLCDSN 400
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
KA + +K+ +S+ L YA R +H E +
Sbjct: 401 QFYKALEASKWMSTKTSFNLFPQDYAAR--LHMIENVL 436
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 9/221 (4%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
I L +GN + +E+ + NL + KAL+ S+W+ T + +DYA+ L
Sbjct: 370 ITPLLESLERKGNVVKPSELRDLIKNLCDSNQFYKALEASKWMSTKTSFNLFPQDYAARL 429
Query: 68 DLIAKLRGLQKAESYIQK-IPESFRGEVVYRTLLANCVAGNN--VKKAEEVFNRMKDKGF 124
+I + G ++AE + ++ IPE+ + + VY TLL+ C A ++ + KAE +F +M D GF
Sbjct: 430 HMIENVLGFEEAEKFFERSIPENMKDDYVYGTLLS-CYAKSHKTLDKAEAIFEKMGDLGF 488
Query: 125 PVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
N ++ LY +L K+ KV +++ M+ N++ + ++ + D+ MD+
Sbjct: 489 LSKPSPFNSMISLYSQLGKREKVENLISKMKCMNIEPDSLTMNNVLRMYADETDIKTMDK 548
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
K E I + +T+ + E+A +LK +E
Sbjct: 549 Y----KREWINAEKNTKLEMRTMVAMANAYERAGLLLKAIE 585
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 181/423 (42%), Gaps = 60/423 (14%)
Query: 9 HSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL----ETNKKLDFIERDYA 64
ST K E G L RA +M +L R +G ++ E L E+N KLD RD
Sbjct: 146 ESTFKKMRELGL-LLRASPYNSMTSLYRRIPHGNRCKVDEILREMKESNIKLD---RDTV 201
Query: 65 S-CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVK-KAEEVFNRMKDK 122
+ L + A + + E ++ + + + + R +A + K KA+E+ R ++
Sbjct: 202 NNALRVYADVTHIATMEKFLAEWEGNTPLDWLTRLDMAKAYLRSGFKGKAKEMLRRTEEL 261
Query: 123 GFPVTSFACNQLLILYK----RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
P + +L+ LY R D +V D+ + K++ + ++ LI + +D+
Sbjct: 262 RDPKSY---EELMRLYGEAGGRKDVYRVWDLYKKLSKKDNE----GFRALIGSLLKLDDI 314
Query: 179 TGMDQVV-EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
G ++ + + G+ D +L Y G EKA+ ++KE + ++ + +
Sbjct: 315 NGAEEFYYKEWECSGLPFDVRIPTMLVSSYREKGMVEKADKLIKE-----IMKNEESVKP 369
Query: 238 LLPLYAELGKADQVAR-------IWKLCESNPWLDVCMAAIEAW---------------G 275
+ PL L + V + I LC+SN + A+ W
Sbjct: 370 ITPLLESLERKGNVVKPSELRDLIKNLCDSNQFYKALEAS--KWMSTKTSFNLFPQDYAA 427
Query: 276 KLNKVE------EAEAVFKRMSKTWKKLSTKHYTALLKVYA-DHKMLSKGKDLVKQMAES 328
+L+ +E EAE F+R K Y LL YA HK L K + + ++M +
Sbjct: 428 RLHMIENVLGFEEAEKFFERSIPENMK-DDYVYGTLLSCYAKSHKTLDKAEAIFEKMGDL 486
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G P +++++ L+ + G+ EK ++++ K + N +P + ++ YA DI +
Sbjct: 487 GFLSKPSPFNSMISLYSQLGKREKVENLISKMKCMN-IEPDSLTMNNVLRMYADETDIKT 545
Query: 389 TEK 391
+K
Sbjct: 546 MDK 548
>gi|297808773|ref|XP_002872270.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318107|gb|EFH48529.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 492
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 203/445 (45%), Gaps = 13/445 (2%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+ P S+ S L + + G+ ++ +E+ L Y ALQ+ EW+E K++ F
Sbjct: 45 NGPRRSVTSLLQERIDSGHAVALSELRFISKRLIRSNRYDLALQMIEWMENQKEIQFSVY 104
Query: 62 DYASCLDLIAKLRGLQKAESYIQKI---PESFR-GEVVYRTLLANCVAGNNVKKAEEVFN 117
D + L+LI K GL++AE Y +K+ S R + Y LL + V VK+ E
Sbjct: 105 DISLRLELIIKTHGLKQAEEYFEKLLNSSASLRVAKSAYLPLLRSYVKKKMVKEGEVFME 164
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKEN-VKLTQFSYKILIDIKGQSN 176
++ GF VT N+++ LY+ + + +++ M K N + SY + ++ Q +
Sbjct: 165 KLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKVNKIPRNVLSYNLWMNACCQVS 224
Query: 177 DLTGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
+T ++ V M + +E S+ LA Y+ GG EKA+ +L+ E + +R
Sbjct: 225 GVTAVETVYREMVGDKSVEVGWSSLCTLANVYIKGGFDEKAKLVLENAEKLLNRSNRLGY 284
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVC---MAAIEAWGKLNKVEEAEAVFKRMSK 292
L+ LYA LG + V R+W+ + C + + + K+ +EEAE VF
Sbjct: 285 FFLITLYASLGDKEGVVRLWEASKLVCGRISCANYICVLSSLVKIGDLEEAERVFNEWEA 344
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ LL Y + + K + L ++ E G + W+ L++ V+ +EK
Sbjct: 345 QCFNYDVRVSNVLLGAYMRNGEIRKAESLHARVLERGGNPNYKTWEILMEGWVKCQSMEK 404
Query: 353 ADSILLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
A + +A + K ++P S M I + + I + +G +A ++
Sbjct: 405 AIVAMHRAFELMKGCHWRPSESIVMAIAKYFEEEEKIEEANTYIRDLHHLG-LASLPLYR 463
Query: 410 TLVQAYINAKTPAYGIRDRMRADNV 434
L++ +A+ PA+ I + M+ D +
Sbjct: 464 LLLRMQEHAQRPAFDIYEMMKLDKI 488
>gi|125541465|gb|EAY87860.1| hypothetical protein OsI_09282 [Oryza sativa Indica Group]
Length = 517
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 186/429 (43%), Gaps = 9/429 (2%)
Query: 14 KYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKL 73
++A E +S E+ + LR R Y +AL++ W++++ D+ L+LIAK+
Sbjct: 71 RWARERGRVSPPELRRDVVRLRRARRYEQALEILSWMDSHNDFRLSPSDHMVRLELIAKV 130
Query: 74 RGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
G +AE Y +K+ + + LL V NV+KAE ++ G PV + N+
Sbjct: 131 HGTSQAEEYYRKLSTAASKKAASFPLLHCYVTERNVQKAETFMAELQRYGLPVDPHSFNE 190
Query: 134 LLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV-EAMKSE 191
++ LY +KV V+ LM++ N+ SY I ++ + + L + E + +
Sbjct: 191 IMKLYVATCQYEKVLSVIYLMKRNNIPRNVLSYNIWMNACAEVSGLASVQSAFKEMLNDD 250
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
+E ST LA + G+ KA A L+ E R ++ YA L D V
Sbjct: 251 MVEVGWSTYCTLANIFKKYGQSSKALACLRTAETKLSSTGRLGYSFIMTCYAALNDRDGV 310
Query: 252 ARIWKLCESNPWLDVC---MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
R+W+ + P M+A+ K+ + AE F KK + LL
Sbjct: 311 IRLWEASKIVPGRIPAANYMSAMVCLIKVGDIGRAEWTFGSWEAESKKHDVRVSNVLLGA 370
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK--- 365
Y + + K + L M E G H W+ L++ V+ +++KA + + K K
Sbjct: 371 YVRNGWIEKAERLHLHMLEKGAHPNYKTWEILMEGFVQSKQMDKAVNAMKKGLSLLKTCH 430
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
++P I + ++G + ++ F ++ Q + +++L+ AYINA I
Sbjct: 431 WRPPLELLEAIAKYFEEQGSVEDADR-FIKVLQKFNLTSLPLYKSLLGAYINADIVPQNI 489
Query: 426 RDRMRADNV 434
+ D +
Sbjct: 490 PQMIAGDQI 498
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 170/366 (46%), Gaps = 8/366 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLANCVA-GNNVKKAEEVFNRMK 120
Y + L + + + + S I K+ ++ + + V+ + N + NVK+A ++F +MK
Sbjct: 109 YTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMK 168
Query: 121 DKGFPVTSFACNQLLILYKR--LDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
D+G T+ N L+ Y + ++ + + L+ ++ENVK ++ LI +
Sbjct: 169 DRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRI 228
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
T VV M + G++PD T LA+ Y G +AE M+ EM+ + + + TC ++
Sbjct: 229 TEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGII 288
Query: 239 LPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ Y + GK R + +P L + + I+ + + + + M +
Sbjct: 289 INGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGV 348
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K ++ ++ ++ ++ K +++ M ++G A+ L K +V GE EKA+S
Sbjct: 349 KPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAES 408
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
LL A ++ +P + I+ + G + +++ +M ++G K F+TL+ Y
Sbjct: 409 -LLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIWGY 467
Query: 416 INAKTP 421
AK P
Sbjct: 468 GEAKEP 473
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 87/206 (42%), Gaps = 5/206 (2%)
Query: 238 LLPLYAELGKADQVARIWK-LCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + E GK + I+ L E P L + A + + + ++ ++ K
Sbjct: 77 LMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNG 136
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K + + A++ +++ + + + ++M + GC ++ L+K + G E+
Sbjct: 137 LKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECL 196
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+L Q+ KP ++ ++ + + I + ++M G + TL +A
Sbjct: 197 KLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARA 256
Query: 415 YI-NAKTP-AYGIRDRMRADNVFPNK 438
Y N +T A G+ M+ + V PN+
Sbjct: 257 YAQNGETSRAEGMILEMQNNRVMPNE 282
>gi|356542147|ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Glycine max]
Length = 483
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 171/367 (46%), Gaps = 9/367 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P I + L ++ EEG ++++ ++ + L R + ALQ+ EW+ + + +
Sbjct: 34 PVIPVSPILKQWVEEGREVTKLQLENLVYRLTQSRRFTHALQVLEWMSNERNYELSPGNI 93
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A ++LI+K+RGL++AE Y + IP++ +Y LL +V++AE V ++K+
Sbjct: 94 AKQINLISKVRGLEQAEKYFRGIPDAKIEFKIYAALLRCYAEHKSVEEAEAVLKKIKELH 153
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
+ CN +L LY + K + D L+ KE +Y I ++ + D+ GM++
Sbjct: 154 PVNITACCNMMLELYAKKGKYEKLDRLMQEMKEKDICNAGTYTIRLNAYVIATDIKGMEK 213
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRK----EKAEAMLKEMEG-DNLKEHRWTCRLL 238
++ M+ ++P ++ +G RK EK AMLK+ E K R +
Sbjct: 214 LLMQME---VDPMATVDWYTYMTAANGYRKVHNFEKVAAMLKKSEHVARGKTKRLAYESI 270
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVC-MAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+YA +G D+V R+W +C S + + + + KL+ ++ AE + + +
Sbjct: 271 QTMYAIIGNKDEVHRLWNMCTSPKKPNKSYIRMLSSLVKLDDIDGAEKILEEWESVHENF 330
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ ++ Y K + ++++ + G H+ WD L + G ++E A +
Sbjct: 331 DVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKHLDGRTWDRLACGYNAGNDMENAVQAM 390
Query: 358 LKAQQQN 364
KA N
Sbjct: 391 KKAVSTN 397
>gi|356547012|ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20710, mitochondrial-like [Glycine max]
Length = 482
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 200/445 (44%), Gaps = 15/445 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S+ L ++ EEG ++++ ++ L R + ALQ+ EW+ + +
Sbjct: 34 PLSSVSPILNQWVEEGREVTKLQLEDLAYRLTQSRRFTHALQVLEWMSNERNYELSPGSI 93
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A ++LI+K+ GL++AE Y + IP+ +Y LL +V++AE V +K+
Sbjct: 94 AKQINLISKVHGLEQAERYFRGIPDDKIEFKIYAALLRCYAEHKSVEEAEAVMKXIKELH 153
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
+ CN +L LY + K + D L+ KE +Y I ++ D+ GM++
Sbjct: 154 PVNITPCCNMMLELYAKKGKYEKLDRLMQEMKEKDICNASTYTIRLNAYVVVTDIKGMEK 213
Query: 184 VVEAMKSEGIEP-DSSTQAILAKHYVSGGRKEKAEAMLKEME----GDNLKEHRWTCRLL 238
++ M+++ + D T A Y EK MLK+ E G+ R +
Sbjct: 214 LLMQMEADPVATVDWYTYMTAANGYRRVHNFEKVAEMLKKSEHLARGNT---RRLAFESI 270
Query: 239 LPLYAELGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+YA +G D+V R+W +C S P + + + KL++++ AE + + +
Sbjct: 271 QTMYAIIGNKDEVYRLWNMCTSLKKPNNSSYIRMLSSLAKLDEIDGAEKILEEWESKYAN 330
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ ++ Y K + ++++ + G + WD L + G ++EKA
Sbjct: 331 FDVRIPNLMISAYCKWGQFDKAEAYIRRLLDGGKQLDGRTWDRLACGYKAGNDMEKAVQA 390
Query: 357 LLKAQQQN--KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ KA +N +P + + + ++GD+ +I + +++ + L +
Sbjct: 391 MKKAVSKNLGGRRPDPFTLVACVKYLKEKGDLDLALEILKLCIENSHIS-VTSYDGL-SS 448
Query: 415 YINAKTPAYGIRDRMRAD-NVFPNK 438
Y++++TP G D ++ D +F N+
Sbjct: 449 YVHSETPDTGPLDLIKGDYQMFENE 473
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 185/402 (46%), Gaps = 12/402 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + + KL+ + I K+ E+ ++Y ++ NVK+A ++F +MK
Sbjct: 96 YTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMK 155
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKE-NVKLTQFSYKILIDIKGQSNDL 178
D G T+ N L+ Y K + +L LM + +VK +Y IL+ ++
Sbjct: 156 DTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNI 215
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
V+ M + GI+PD T ILA+ Y G +AE ++ EM+ + + + TC ++
Sbjct: 216 EEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGII 275
Query: 239 LPLYAELGKADQVAR-IWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ Y + G + R ++++ E +P L + + I+ + + + + M +
Sbjct: 276 VNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGV 335
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K ++ ++ ++ ++ K +++ MA++G A+ L K +V GE E A+S
Sbjct: 336 KPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAES 395
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ L + ++ +P I+ + G + + + ++ +M ++G K F+TL+ Y
Sbjct: 396 V-LTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGY 454
Query: 416 INAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAV 455
A+ P A + M VFP K+ VA DA+R +
Sbjct: 455 AEARQPGKAEELLQLMEEKGVFPEKSTIQLVA--DAWRNIGL 494
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K EA +F + + + + YT L+ K L+ ++ E+G + ++
Sbjct: 73 KPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYN 132
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A++ E G V++A I K + KP S++ ++ Y G K+ H M
Sbjct: 133 AMINAFSESGNVKEAMKIFQKMKDTG-CKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSL 191
Query: 399 VGYV-ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
G V + + LV+A+ + K A+ + +M A + P+
Sbjct: 192 DGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPD 233
>gi|224141193|ref|XP_002323959.1| predicted protein [Populus trichocarpa]
gi|222866961|gb|EEF04092.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 135/259 (52%), Gaps = 7/259 (2%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S+ + + K+ EGN +S +E+ LR + + AL++SEW+ +++ + + D+
Sbjct: 20 PKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHALEISEWMVAHEEFELSDTDH 79
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
AS +DL+ K+ G+ AE Y +P + + Y LL + A ++KAEE + R+K
Sbjct: 80 ASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYAAAKLIEKAEEFYKRIKGSN 139
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
P T+ N+++ LY + + +KV+ V+ ++ + V F+Y + I + ++ +
Sbjct: 140 LPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIFTYNLWISSCAAALNIDKVR 199
Query: 183 QVVEAMKSE-GIEPDSSTQAILAKHYVSGGR---KEKAEAMLKEMEGDNLKEHRW-TCRL 237
++++ M + G+ D + YV+ G E + A + E E + + W T
Sbjct: 200 RILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAAVVEAE-KKITQREWITYDF 258
Query: 238 LLPLYAELGKADQVARIWK 256
L+ LYA LGK D++ +IWK
Sbjct: 259 LVILYAGLGKKDKIDQIWK 277
>gi|224121664|ref|XP_002330622.1| predicted protein [Populus trichocarpa]
gi|222872226|gb|EEF09357.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 157/315 (49%), Gaps = 19/315 (6%)
Query: 58 FIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFN 117
F D A L LI ++RGL++AE+Y K+ + + Y +L CV +V+KAE V
Sbjct: 9 FTTEDAAVRLGLIHRVRGLEEAENYFNKLSVKLKTKYTYGAILNGCVREKSVQKAEAVMQ 68
Query: 118 RMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M++ G +SF N L+ILY + D K+ ++ ME+ + +++ + LI ++
Sbjct: 69 EMREGGMTTSSFPYNILIILYSQTGDFDKIPPLMKEMERNGIAEDKYTLRNLIAASVAAS 128
Query: 177 DLTGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWT 234
D++G++++++ M+ + D A+ A Y+ G E A ML+++E ++ +
Sbjct: 129 DISGVERILKLMEENPELGLDWKLYAMAADAYLKIGSIETALTMLEKLEKWMAFRKKKAV 188
Query: 235 CRLLLPLYAELGKADQVARIWKLCE-SNPWLDV---CMAAIEAWGKLNKVEEAEAVFKRM 290
LL LYA+ G D++ RIW L + S+ +D CM I++ KL+ +E AE +F+
Sbjct: 189 FNFLLSLYAKTGNKDELYRIWNLYKPSSESMDTSYCCM--IDSLTKLDDIEGAEKIFEE- 245
Query: 291 SKTWKKLSTKHY-----TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
W+ T Y LL Y + + K + +++ + W + K ++
Sbjct: 246 ---WESQCTTTYDFRVLNGLLVAYCNRGLFEKAEAAIEKAVQGRTPYAS-TWHVMAKGYM 301
Query: 346 EGGEVEKADSILLKA 360
E ++ K +L +A
Sbjct: 302 EHDQIPKTVEMLKRA 316
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 56/276 (20%)
Query: 155 KENVKL-TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
K +VKL T+++Y +++ + + + V++ M+ G+ S IL Y G
Sbjct: 36 KLSVKLKTKYTYGAILNGCVREKSVQKAEAVMQEMREGGMTTSSFPYNILIILYSQTGDF 95
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP-----WLDVCM 268
+K ++KEME + + E ++T R L+ V RI KL E NP W M
Sbjct: 96 DKIPPLMKEMERNGIAEDKYTLRNLIAASVAASDISGVERILKLMEENPELGLDWKLYAM 155
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH--YTALLKVYADHKMLSKGKDLVKQMA 326
AA +A+ K+ +E A + +++ K W K + LL +YA + KD + ++
Sbjct: 156 AA-DAYLKIGSIETALTMLEKLEK-WMAFRKKKAVFNFLLSLYAK----TGNKDELYRI- 208
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP----MFSSYMLIMDQYAK 382
W N +KP M +SY ++D K
Sbjct: 209 ----------W--------------------------NLYKPSSESMDTSYCCMIDSLTK 232
Query: 383 RGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAYIN 417
DI EKIF Q F+ L+ AY N
Sbjct: 233 LDDIEGAEKIFEEWESQCTTTYDFRVLNGLLVAYCN 268
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 181/393 (46%), Gaps = 10/393 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVVYRTLLANCVA-GNNVKKAEEVFNRMK 120
Y + L+ + + + S + + E + + ++ L N A N++ A++V +MK
Sbjct: 110 YTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMK 169
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKE-NVKLTQFSYKILIDIKGQSNDL 178
+ G ++ N L+ Y K + LL LM E NVK +Y +LI + ++
Sbjct: 170 ESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENI 229
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+ VV M + G++PD T +A Y G+ +AEAM+ EM+ ++LK + TC ++
Sbjct: 230 SEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTII 289
Query: 239 LPLYAELGKADQVAR-IWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ Y GK + R ++++ + P L V + + + + + + V K M +
Sbjct: 290 ISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQI 349
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ Y+ ++ ++ L K K++ M +SG A+ L K +V E+EKA+
Sbjct: 350 RPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEE 409
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+L ++ P + ++ + G + + ++F +M + G K F+TL+ Y
Sbjct: 410 -MLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGY 468
Query: 416 INAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
AK P A G+ M +V P K+ VA+
Sbjct: 469 AEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAE 501
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 5/188 (2%)
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
K K +EA +F+ + + + S YT LL K +V + E +
Sbjct: 84 KSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSI 143
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
++AL+ E G +E A ++ K ++ KP +Y ++ Y G + K+
Sbjct: 144 FFNALINAFAESGNMEDAKKVVQKMKESG-LKPSACTYNTLIKGYGIAGKPDESMKLLDL 202
Query: 396 MRQVGYV-ARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAFR- 451
M G V K + L++A + + A+ + +M A + P+ +A A
Sbjct: 203 MSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNG 262
Query: 452 KTAVSELL 459
KTA +E +
Sbjct: 263 KTAQAEAM 270
>gi|302798903|ref|XP_002981211.1| hypothetical protein SELMODRAFT_420692 [Selaginella moellendorffii]
gi|300151265|gb|EFJ17912.1| hypothetical protein SELMODRAFT_420692 [Selaginella moellendorffii]
Length = 816
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 190/433 (43%), Gaps = 47/433 (10%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
IH+ +++ GN +S+ + L R +ALQ+ W+ +K RDYA +
Sbjct: 118 IHAWISR----GNLVSKEALISICHKLCYIRRQIRALQIINWIVDDKPFTVTPRDYALQI 173
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
L + KAE ++P + E V L+A+ N + KAE +K
Sbjct: 174 KLTCRYASPIKAERIYDRVPAELKTEEVSTALIASMSRSNVMLKAEAWHTALKLN----N 229
Query: 128 SFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
+ ACN ++IL+ R ++ + +VL L Y+ L+ GQ N LT +
Sbjct: 230 ARACNVMMILFLRRNRHR--EVLQL------------YQDLVASGGQPNPLTYLLLFKYR 275
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
+ I+ G +E AEA LK+++ + K T ++ +YA LGK
Sbjct: 276 NRIGAID----------------GLEEAAEAALKKIDVHDEKVRNATRSDMMVVYAYLGK 319
Query: 248 ADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
D V ++W + W +AAI A+G L K+ AE V ++ KT KK K Y A+
Sbjct: 320 PDMVEKLWSMIHKESWTLAGRFVAAINAFGILGKISRAEDVLNQVLKTRKKAIQKPYCAM 379
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ--- 362
+ VYA H M+ K + +K++ ++ LV ++ E EKA L + +
Sbjct: 380 IGVYAKHGMMEKAELTMKKLRLELSFPWFAPFNHLVSGYLARDEPEKALEKLREGMEYVV 439
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK-TP 421
+ +P + + +M +A + D+ EK+ M G K + L++ Y+ AK +P
Sbjct: 440 DKRIEPDYEMVLGMMPVFASKRDVEGAEKL---MSLFGLYGDAKLYNALLKVYVEAKVSP 496
Query: 422 AYGIRDRMRADNV 434
RM + V
Sbjct: 497 GPFFLGRMARNKV 509
>gi|255553777|ref|XP_002517929.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542911|gb|EEF44447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 188/398 (47%), Gaps = 12/398 (3%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S+ L ++ EGN + +A + + ++ + ALQ+S+W+ L D
Sbjct: 20 PKASVIPVLDQWVNEGNTVRKALLRSLVNLMKGFNRFNHALQISQWMADRPNLTLSPSDV 79
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
L+L+ ++ G AE Y +K+P+ F+ VY LL+ V ++V+KAE + M+ KG
Sbjct: 80 VVRLELVHRIYGSAHAEKYFEKLPDKFKCREVYCALLSGYVQESSVRKAEAIMEEMRAKG 139
Query: 124 FPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ F N L+ LY K D +K+ ++ ME V ++ L+ +++++GM+
Sbjct: 140 MANSCFPYNLLINLYPKNGDYEKINMLIQEMETNGVVRGAYTMSNLMAAYVAASNISGME 199
Query: 183 QVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC-RLLLP 240
+++ + K + D ++ A Y+ G EKA ML+++E E + + +L+
Sbjct: 200 RILNQIEKDPQLGNDWRVYSVAASGYLKFGLIEKALTMLRKLEDVMPLEKKTSAFDILVT 259
Query: 241 LYAELGKADQVARIWKLCESNPWLDV----CMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LY + GK D++ +W + P +++ M I + KL+ ++ AE +F+
Sbjct: 260 LYGKTGKRDELYLVWNTYK--PLIELKETSVMTMISSLSKLDDIKGAEKIFREWESQCMM 317
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ LL Y +L K + V++ A+ +W L ++E ++ KA +
Sbjct: 318 YDFRVLNTLLFAYCRKGLLKKAEAAVEKAAKDRTPCAS-SWGILAMGYIEHNQMYKAVEM 376
Query: 357 LLKAQ--QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
L KA ++P + ++ K+GD+ E++
Sbjct: 377 LKKALSISGQGWRPNSMTLTACLNFLEKQGDVEGVEEV 414
>gi|18411800|ref|NP_567220.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75163252|sp|Q93WC5.1|PP300_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01990, mitochondrial; Flags: Precursor
gi|14517494|gb|AAK62637.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|16323354|gb|AAL15390.1| AT4g01990/T7B11_26 [Arabidopsis thaliana]
gi|332656708|gb|AEE82108.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 502
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 43/321 (13%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
+ TL ++ EG + + ++ +LR R +AL++ EW+E K++ F D+A L
Sbjct: 56 MEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWME-RKEIAFTGSDHAIRL 114
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPV 126
+LIAK +GL+ AE+Y + +S + + Y +LL CV V KA+ F M D
Sbjct: 115 NLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEV-KAKAHFENMVDLNHVS 173
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
S N L+ +Y L + +KV +++ M+++++ +Y + I G DL G+++V+
Sbjct: 174 NSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVL 233
Query: 186 EAMKSEGIEPDS-STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
+ MK+EG S +T A LA Y+ G KAE LK +E + + R L+ LY
Sbjct: 234 DEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTG 293
Query: 245 LGKADQVARIWKLC-----------------------------------ESNPW-LDVCM 268
+ A +V R+W L ES W D+ M
Sbjct: 294 IANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRM 353
Query: 269 A--AIEAWGKLNKVEEAEAVF 287
A AI ++ K N EEAEAVF
Sbjct: 354 ANVAISSYLKQNMYEEAEAVF 374
>gi|4558568|gb|AAD22661.1|AC007138_25 hypothetical protein [Arabidopsis thaliana]
gi|7268583|emb|CAB80692.1| hypothetical protein [Arabidopsis thaliana]
Length = 501
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 153/321 (47%), Gaps = 43/321 (13%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
+ TL ++ EG + + ++ +LR R +AL++ EW+E K++ F D+A L
Sbjct: 55 MEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWME-RKEIAFTGSDHAIRL 113
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPV 126
+LIAK +GL+ AE+Y + +S + + Y +LL CV V KA+ F M D
Sbjct: 114 NLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEV-KAKAHFENMVDLNHVS 172
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
S N L+ +Y L + +KV +++ M+++++ +Y + I G DL G+++V+
Sbjct: 173 NSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVL 232
Query: 186 EAMKSEGIEPDS-STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
+ MK+EG S +T A LA Y+ G KAE LK +E + + R L+ LY
Sbjct: 233 DEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTG 292
Query: 245 LGKADQVARIWKLC-----------------------------------ESNPW-LDVCM 268
+ A +V R+W L ES W D+ M
Sbjct: 293 IANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRM 352
Query: 269 A--AIEAWGKLNKVEEAEAVF 287
A AI ++ K N EEAEAVF
Sbjct: 353 ANVAISSYLKQNMYEEAEAVF 373
>gi|125579556|gb|EAZ20702.1| hypothetical protein OsJ_36321 [Oryza sativa Japonica Group]
Length = 491
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 183/438 (41%), Gaps = 19/438 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S L ++AEEG + + ++ + LR R + AL+ +KL F
Sbjct: 40 PKRSAAVVLRRWAEEGRTVQKYQLNRVVCQLRKYRRFKHALE--------RKLSFFRGPR 91
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
+ GL AE + + +PE +G LL V KAE + M G
Sbjct: 92 RCTSTSCQRSGGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAG 151
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ + N ++ LY + +KV +++ + + + +Y I + + N + +
Sbjct: 152 YLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSKKNSVKAAE 210
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V + MK E + PD T ++L Y++ G K L EME ++ R LL LY
Sbjct: 211 KVYDLMKDERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLY 270
Query: 243 AELGKADQVARIW-KLCES-NPWLDV---CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
A L + R+W K+ E+ + D CM + + + + EAE+ +
Sbjct: 271 ASLSDRGNLDRVWRKMRETFRKFSDTEYKCM--LTSLTRFGDIAEAESFYSEWESASGTR 328
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
++ +L Y + M+ K + + + + G W+ V ++ G ++K L
Sbjct: 329 DSRIPNTILAFYIKNGMMEKAEGFLDHIVQKGVKPSYSTWELFVWGYLSDGRMDKVLECL 388
Query: 358 LKAQQ-QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
KA K+ P I Q ++GDI + EK+ R+ GYV + + ++++ Y
Sbjct: 389 KKALSCLEKWDPNPQLATAIYSQIEEKGDIEAAEKLLVMFREAGYVTT-EIYNSVLRTYA 447
Query: 417 NAKTPAYGIRDRMRADNV 434
A+ + +RM D V
Sbjct: 448 KAELMPLIVDERMDQDKV 465
>gi|115436132|ref|NP_001042824.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|14495231|dbj|BAB60950.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532355|dbj|BAF04738.1| Os01g0301700 [Oryza sativa Japonica Group]
gi|125525550|gb|EAY73664.1| hypothetical protein OsI_01547 [Oryza sativa Indica Group]
gi|125570062|gb|EAZ11577.1| hypothetical protein OsJ_01442 [Oryza sativa Japonica Group]
gi|215713519|dbj|BAG94656.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 504
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 201/445 (45%), Gaps = 26/445 (5%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P + L ++ E LS ++ + R + ALQL +W+E + ++ + +
Sbjct: 52 PSGGMVEELGRWLRERRPLSEEQVLFCVRRFRKFKQNKHALQLMDWMEA-RGVNLELKHH 110
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDK 122
A LDL++KL G+ AE Y +P+ FR + Y TLL NC A + + +K E++ MK
Sbjct: 111 ALRLDLVSKLNGIHAAEEYFGSLPDIFRSKQTYSTLL-NCYAEHRMAEKGLELYENMKAM 169
Query: 123 GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
N L+ LY + D+ +K+ ++ M++ ++ +FSY +L + ND+
Sbjct: 170 NIVSDILVYNNLMCLYLKTDQPEKIPTTVVKMQESGIQPNKFSYFVLTESYIMMNDIESA 229
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH---RWTCRLL 238
++V++ ++ P S A LA Y + +KAE LK+ E + L +H W C L
Sbjct: 230 EKVLKELQEVNSVP-WSLYATLANGYNKLQQFDKAEFTLKKAE-EVLDKHDVFSWHC--L 285
Query: 239 LPLYAELGKADQVARIW-------KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
L YA G +V RIW K C + +L ++A KL+ + + +F+
Sbjct: 286 LSHYANSGNLSEVKRIWESLKSAFKKCTNRSYL----VMLKALKKLDDFDTLQQIFQEWE 341
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ + K +++ Y D M+ K + ++Q + H + + ++E ++
Sbjct: 342 SSHEHYDMKIPNIIIQAYLDKGMVDKA-EAMRQTTMAQDHSNYRTFCIFAEFYLEKSKMN 400
Query: 352 KADSILLKAQQQNKFKPMFSSYML--IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+A + A++ K + ++ + + D+ E ++ +G + + ++
Sbjct: 401 EALQVWKDAKKMVKGQDWVPEKLVNRYLKHFEDSKDVDGMETFCECLKNLGRLDA-EAYE 459
Query: 410 TLVQAYINAKTPAYGIRDRMRADNV 434
L++ YI+ I RM D V
Sbjct: 460 ALIRTYISVGRTNPSIPQRMEVDRV 484
>gi|225459164|ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Vitis vinifera]
Length = 475
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 203/447 (45%), Gaps = 25/447 (5%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + L + ++G+ ++ +++ L + + AL++ W+E + D+
Sbjct: 23 PRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQNRFQMSAADH 82
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A L+LI K++ L +AE Y + +P S + LL V ++KAE + ++ D G
Sbjct: 83 AIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDLG 142
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
V+ N+++ LY + ++V V+L M++ + L SY + + + + L +
Sbjct: 143 LTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASAE 202
Query: 183 QVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
V + M + +E ST + LA Y+ G +KA LK E +R L+ +
Sbjct: 203 MVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLITM 262
Query: 242 YAELGKADQVARIWKLCE-------SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM-SKT 293
YA L ++V R+W+ + S ++ + + + KL + EAE +F+ SK
Sbjct: 263 YASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLV----KLGDIAEAERIFREWESKC 318
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
W K + LL Y + K + L E G W+ L++ ++ ++KA
Sbjct: 319 W-KYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKA 377
Query: 354 DSILLKAQQQNK---FKP---MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+ + K K ++P + ++ ++++ D++ K+ H Q+G VA+
Sbjct: 378 INAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKVIH---QLG-VAKLPL 433
Query: 408 FQTLVQAYINAKTPAYGIRDRMRADNV 434
+++L++ ++ + P + I M D +
Sbjct: 434 YKSLLRMHLLFQRPVFDILKMMEKDEI 460
>gi|302801850|ref|XP_002982681.1| hypothetical protein SELMODRAFT_445231 [Selaginella moellendorffii]
gi|300149780|gb|EFJ16434.1| hypothetical protein SELMODRAFT_445231 [Selaginella moellendorffii]
Length = 1208
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 190/433 (43%), Gaps = 47/433 (10%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
IH+ +++ GN +S+ + L R +ALQ+ W+ +K RDYA +
Sbjct: 107 IHAWISR----GNLVSKEALISICHKLCYIRRQIRALQIINWIVDDKPFTVTPRDYALQI 162
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
L + KAE ++P + E V L+A+ N + KAE +K
Sbjct: 163 KLTCRYASPIKAERIYDRVPAELKTEEVSTALIASMSRSNVMLKAEAWHTALKLN----N 218
Query: 128 SFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
+ ACN ++IL+ R ++ + +VL L Y+ L+ GQ N LT +
Sbjct: 219 ARACNMMMILFLRRNRHR--EVLQL------------YQDLVASGGQPNPLTYLLLFKYR 264
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
+ I+ G +E AEA LK+++ + K T ++ +YA LGK
Sbjct: 265 NRIGAID----------------GLEEAAEAALKKIDVHDEKVRNATRSDMMVVYAYLGK 308
Query: 248 ADQVARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
D V ++W + W +AAI A+G L K+ AE V ++ KT KK K Y A+
Sbjct: 309 PDMVEKLWSMIHKESWTLAGRFVAAINAFGILGKISRAEDVLNQVLKTRKKAIQKPYCAM 368
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ--- 362
+ VYA H M+ K + +K++ ++ LV ++ E EKA L + +
Sbjct: 369 IGVYAKHGMMEKAELTMKKLRLELSFPWFAPFNHLVSGYLARDEPEKALEKLREGMEYVV 428
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK-TP 421
+ +P + + +M +A + D+ EK+ M G K + L++ Y+ AK +P
Sbjct: 429 DKRIEPDYEMVLGMMPVFASKRDVEGAEKL---MSLFGLYGDAKLYNALLKVYVEAKVSP 485
Query: 422 AYGIRDRMRADNV 434
RM + V
Sbjct: 486 GPFFLGRMARNKV 498
>gi|343172214|gb|AEL98811.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 150/319 (47%), Gaps = 6/319 (1%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTL 99
Y AL+LS+ + K ++ D A LDLI K G+ AE+Y +PES + Y L
Sbjct: 1 YYAALKLSDTMAW-KGMNMTISDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGAL 59
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENV 158
L KAE + +MK+ G P+T+ + N L+ LY + +KV ++ M+ ++
Sbjct: 60 LNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDI 119
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAE 217
L ++Y + + D+ G+++V++ MK +G + D +T + LA YV EKAE
Sbjct: 120 MLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFEKAE 179
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAW 274
LKE+E N + + LL LY + G +V R+W +L + I+
Sbjct: 180 NALKELEKRNTSQDLSPYQFLLTLYGKTGNLIEVYRVWRSLRLAFPKTPNVAYLNMIQRL 239
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
L ++ AE F + + L+ Y +L + K+L K+ + G
Sbjct: 240 VTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGLLQQAKELKKRACKRGAKPNA 299
Query: 335 LAWDALVKLHVEGGEVEKA 353
W+ ++ +++ GEV+ A
Sbjct: 300 KTWEIFLEHYLKAGEVKLA 318
>gi|224130976|ref|XP_002320971.1| predicted protein [Populus trichocarpa]
gi|222861744|gb|EEE99286.1| predicted protein [Populus trichocarpa]
Length = 473
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 149/294 (50%), Gaps = 13/294 (4%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGK---ALQLSEWLETNKKLDFIERDY 63
S+ TL + EG ++ ++ +A +R R YG+ A+++ EW++ K + +
Sbjct: 28 SVSKTLNDFVLEGGKTNKVDL---LACIRELRKYGRFDYAIEVMEWMQKRK----MNVSH 80
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLIAK G+ AE+Y + S + + LL+ +KA +F +M
Sbjct: 81 AVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKALTLFEKMDKMK 140
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F +TS N L+ L+ RLD+ +KV ++ M+++ V F+Y + + G ND G++
Sbjct: 141 FLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSYGCLNDFEGVE 200
Query: 183 QVVEAMKSEGIEPDS-STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+V++ MK +G + S +T LA YV G +KAE+ LK++E +++R L+ L
Sbjct: 201 RVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIERDYREAYHFLITL 260
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
YA +V R+W +SN ++ + L K+++ E + K K W+
Sbjct: 261 YAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCF-KEWE 313
>gi|297746078|emb|CBI16134.3| unnamed protein product [Vitis vinifera]
Length = 453
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 154/355 (43%), Gaps = 44/355 (12%)
Query: 18 EGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQ 77
EG + R I A+ LR + +AL++ EW+ + E DY+ L+ KL G+
Sbjct: 83 EGCPIHRGHIFHAINRLRKLKFNKRALEVMEWVVRERPYRPKELDYSYLLEFTTKLHGIS 142
Query: 78 KAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLIL 137
+ E +P F+ E++Y L+ C+ ++ + +M++ G P++ N+L+IL
Sbjct: 143 QGEKLFSHVPLEFQNELLYNNLVIACLDKGVIRLSLAYMKKMRELGHPISYLVFNRLIIL 202
Query: 138 YKRLDKKKVAD-VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD 196
+ ++K+ +L M+ + V +Y IL+ I+ +++ G+ +V MK + +EP+
Sbjct: 203 HSSPHRRKIIPRILTQMKADKVARHVSTYNILMKIEANEHNIEGLVKVFGEMKQQQVEPN 262
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-- 254
+ +LA + AEA ++ +E + T +L+ LY LGK + +
Sbjct: 263 EVSYCLLATAHAVAKLYTVAEAYVEAVEKSITGNNWSTLDVLIILYGYLGKPTDLEPLVR 322
Query: 255 -----------------------W----------------KLCESNPWLDVCMAAIEAWG 275
W ++ +S PWL+ ++ +E +
Sbjct: 323 NKVKKRVEINRAIQFNDICLFQTWEALKTLELGKGLTISTRIRKSIPWLETTLSIVEIFS 382
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ VE AE +F+ + T Y L+K Y K+ +L+++M G
Sbjct: 383 ENGDVENAEKLFEELKTANYTRYTFVYNTLIKAYVKAKVYD--PNLLRRMILGGA 435
>gi|255581582|ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 300
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 120/225 (53%), Gaps = 4/225 (1%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P +SI L ++ EEG +++ ++ + + LR + Y AL++S W+ + RD
Sbjct: 61 PKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMWMSDKRYFALTSRDV 120
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVA-GNNVKKAEEVFNRMKDK 122
A LDL++K+ G+++AE Y + +P+ + VY LL NC A +V KAE V M+D
Sbjct: 121 AIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALL-NCYAYAKSVDKAEAVMQNMRDL 179
Query: 123 GFPVTSFACNQLLIL-YKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
GF + N +L L Y+ + KK+ ++L ME+ + +F+ I + D+ M
Sbjct: 180 GFAGKTLTYNVMLNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGIQLSAYAAICDIQRM 239
Query: 182 DQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
++++ M+S+ + D AI+A Y G +KA MLK+ EG
Sbjct: 240 EKIMSRMESDANVVTDWCNYAIVANGYRKAGLMDKALEMLKKSEG 284
>gi|395146485|gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 10/327 (3%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ A ++ L Y +G + + E+ + LR + L++ EW+E + ++
Sbjct: 53 LGATGGTVDKVLNDYVMDGMSIRKVELMRCVKELRKYGRFNHGLEIMEWME-KRGINLGH 111
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
D A LDLI K +G+ +AE+Y + S + Y +LL + + +KA ++F +M
Sbjct: 112 GDLAVRLDLICKTKGITEAENYFNGLVPSAKNPATYGSLLNSYCKKLDSEKALQLFQKMD 171
Query: 121 DKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
F S N L+ +Y RL ++ KV +++ M++ N+ F+Y I I G D
Sbjct: 172 KLKFFRNSLPFNNLMSMYMRLGQQEKVPELVSQMKQMNLPPCTFTYNIWIQSLGHMRDFE 231
Query: 180 GMDQVVEAMKSE---GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
G+ +V+E M+++ G + +T + LA Y S G E+A+ LK ME R
Sbjct: 232 GIKKVLEEMRNDVNFGNNFNWTTYSNLAAVYTSAGEFERAKLALKMMEERIDSHDRNAYH 291
Query: 237 LLLPLYAELGKADQVARIWKLCESNPWLDVCMAA----IEAWGKLNKVEEAEAVFKRMSK 292
LL LY + ++V R+W C + V A+ ++A +L VE VF+
Sbjct: 292 FLLTLYGGIADLEEVHRVWG-CLKAKFNQVTNASYLVMLQALARLKDVEGISKVFEEWES 350
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGK 319
+ ++VY + M ++ +
Sbjct: 351 VCTSYDMRVANVAIRVYLEKGMYNEAE 377
>gi|297843032|ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335239|gb|EFH65656.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 147/295 (49%), Gaps = 8/295 (2%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
++ TL ++ EG + + ++ +LR R + AL++ +W+E +K+ F D+A
Sbjct: 73 TVAETLNQFIMEGITVRKVDLFRCAKDLRKFRRHQHALEIFDWME-KRKMTFSVSDHAIR 131
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFP 125
LDLIAK +GL+ AE+Y + S + L NC KA+ F +M + F
Sbjct: 132 LDLIAKAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKAKAHFEKMDELNFV 191
Query: 126 VTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
S N ++ +Y RL + + VL+ M++ + +Y I + G NDL G++++
Sbjct: 192 NNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKI 251
Query: 185 VEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
++ M K + +T + LA + G EKAE+ LK ME +R + L+ LYA
Sbjct: 252 IDEMGKDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKMNPNNRDSHHFLISLYA 311
Query: 244 ELGKADQVARIWK-LCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRM-SKTW 294
+ K +V R+W+ L ++ P ++ + ++A KL ++ + +F SK W
Sbjct: 312 GISKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKIFTEWESKCW 366
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 196/433 (45%), Gaps = 27/433 (6%)
Query: 26 EIALAMANLRTRRMYGKALQLSEW--LETNKKLDFIERDYASCLDLIAKLRG----LQKA 79
+I LR R+ + + + W L ++ K D I C +L+ + G ++A
Sbjct: 121 DIFTVAVQLRMRKQWDSIISICRWILLRSSFKPDVI------CYNLLIEAFGQKLLYKEA 174
Query: 80 ES-YIQKI-PESFRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI 136
ES Y+Q + E Y L+ A C++G ++KAE VF M++ G P ++ N +
Sbjct: 175 ESTYLQLLEARCIPTEDTYALLIKAYCISGL-LEKAEAVFAEMRNYGLPSSAVVYNAYIN 233
Query: 137 -LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
L K + K ++ M+K+ K T +Y +LI++ G++ ++ M S +P
Sbjct: 234 GLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKP 293
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
+ T L + G EKAE + ++M+ L+ + L+ Y+ G A I+
Sbjct: 294 NICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIF 353
Query: 256 KL-----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
L CE P ++A+GK ++AEAVFK M + + K + LL Y+
Sbjct: 354 SLMQHMGCE--PDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYS 411
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
++K ++++ QM +SG + ++++ L+ G+ K + + L+ ++ +
Sbjct: 412 KMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEV-LRVMEKGSYVADI 470
Query: 371 SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDR 428
S+Y +++++Y + G I E +F + G + + + AY K I +
Sbjct: 471 STYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEE 530
Query: 429 MRADNVFPNKALA 441
M D +P+ A
Sbjct: 531 MIDDGCYPDGGTA 543
>gi|358344191|ref|XP_003636175.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355502110|gb|AES83313.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
Length = 790
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 148/325 (45%), Gaps = 8/325 (2%)
Query: 43 ALQLSEWLETN-KKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLA 101
LQ+ +W+ ++ D A LDLIA++ G+ AES+ + + + Y LL
Sbjct: 294 VLQVYDWMNNRPERFRISASDVAIQLDLIARVHGVSSAESFFLNLTNDLKDKRTYGALLN 353
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKL 160
V + +KAE + M+ K + S N ++ L L D KV ++ M+++N++L
Sbjct: 354 AYVHSRSREKAESLLEVMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNIQL 413
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
++Y I + G + M+QV E M K I P+ ST + +A Y+ EKA+
Sbjct: 414 DIYTYNIWLSSCGSQGSIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKMELFEKAQEC 473
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCESNPWLDVCMAAIEAWG 275
LK+ EG L + LL LY +G D+V R+W + S P L A I ++
Sbjct: 474 LKKAEGRILGRDKVPFHYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGY-HAVISSFV 532
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
+++ +E AE +++ ++ L+ Y K K M+E G
Sbjct: 533 RMDDIERAEKLYEEWVSVRPSDDSRIGNLLISWYLKKGKSDKVFSFFKHMSEGGGCPNST 592
Query: 336 AWDALVKLHVEGGEVEKADSILLKA 360
W+ L + H+ V +A S L KA
Sbjct: 593 TWELLSEGHIAEKRVSEALSCLEKA 617
>gi|359497206|ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Vitis vinifera]
Length = 494
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 159/326 (48%), Gaps = 17/326 (5%)
Query: 46 LSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVA 105
+S+W+ + + + RD A ++LI K+ GL++ E+Y I ++ + VY LL NC A
Sbjct: 102 ISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALL-NCYA 160
Query: 106 -GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQF 163
+V KAE + R++D GF T+ N L+ +Y R+ + D+L+ ME++ + +F
Sbjct: 161 LEKSVDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKF 220
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+ I + ++++ G+D +V M+S+ I D ++ A++A Y+ G +K M+K+
Sbjct: 221 TLAIRLSAYAAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKK 280
Query: 223 ME------GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP--WLDVCMAAIEAW 274
+E G N+ LL LYAE + D++ R+W L + + MA I +
Sbjct: 281 LEELIDAKGSNVAFDN-----LLKLYAETRQRDELDRVWMLYKKKEKIYNKGYMAMISSL 335
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K + ++ AE V + + L+ Y + K + LV ++ G +
Sbjct: 336 LKFDDIDAAEKVLEEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLV 395
Query: 335 LAWDALVKLHVEGGEVEKADSILLKA 360
W L ++E ++ KA L KA
Sbjct: 396 DTWFYLANGYLEDSQIPKAVEALKKA 421
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 158/385 (41%), Gaps = 50/385 (12%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCV 104
++S+W+ + + + RD A ++LI K+ GL++ E+Y I ++ + VY LL NC
Sbjct: 22 KISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALL-NCY 80
Query: 105 A-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR---LDKKKVADVLLLMEKE---- 156
A +V KAE + R++D GF + + + L R L + V L + E
Sbjct: 81 ALEKSVDKAEAIMQRLRDLGFISQWMSDKRYIPLMPRDIALRMNLILKVHGLEQVENYFN 140
Query: 157 ----NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
N+K Q Y L++ + + +++ ++ G + L Y G
Sbjct: 141 NIHKNLKTYQV-YIALLNCYALEKSVDKAEAIMQRLRDLGFVRTALGYNTLMNVYYRMGN 199
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
EK + ++ EME + ++T + L YA + I ES+P
Sbjct: 200 WEKLDILMHEMEEKGIFCDKFTLAIRLSAYAAASNIVGIDNIVTRMESDP---------- 249
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
R+ W + + LKV K L K L + + G ++
Sbjct: 250 ----------------RIILDWNSYAVVAH-GYLKVGLVDKTLVMMKKLEELIDAKGSNV 292
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
A+D L+KL+ E + ++ D + + +++ K YM ++ K DI + EK+
Sbjct: 293 ---AFDNLLKLYAETRQRDELDRVWMLYKKKEKIYN--KGYMAMISSLLKFDDIDAAEKV 347
Query: 393 FHRM--RQVGYVARFKQFQTLVQAY 415
R++ Y R F L+ AY
Sbjct: 348 LEEWESRRLSYDFRVPNF--LIDAY 370
>gi|414586983|tpg|DAA37554.1| TPA: hypothetical protein ZEAMMB73_139718 [Zea mays]
Length = 423
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 28/267 (10%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S + L K++ EG D AE+ +L R Y AL++++W++T+ + D E DY
Sbjct: 69 SATAALEKWSSEGRDAPTAELRRIARDLTRVRRYKHALEVADWMKTHHESDLSENDYGMR 128
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+DLI K+ G AE + +K+P + Y LL + +AE +F RMKD P+
Sbjct: 129 IDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDRAERLFERMKDASLPM 188
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N+++ LY + + KV V ++++NV F+Y + S DL G V+
Sbjct: 189 DALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVL 248
Query: 186 EAMKSEGIEPDSSTQAI------LAKHYVSGGR---------KEKAEAMLKEMEGDNLKE 230
+ M +P SST+ LA YV G+ E EA + + E
Sbjct: 249 DEMSR---DPKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARISQRE------ 299
Query: 231 HRW-TCRLLLPLYAELGKADQVARIWK 256
W T L+ L+A LG+ +++ IW+
Sbjct: 300 --WITYDFLVILHAGLGRPERIRDIWR 324
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
K+ AE F+++ K L + YTALL Y KM + + L ++M ++ + L
Sbjct: 134 KVFGASAAEDFFEKLPPGAKSL--EAYTALLHSYGRSKMTDRAERLFERMKDASLPMDAL 191
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
++ ++ L++ GE+ K +++ + ++QN +F +Y L A D+ +
Sbjct: 192 VYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLF-TYNLRASAAAASMDLEGFRAVLDE 250
Query: 396 M 396
M
Sbjct: 251 M 251
>gi|302794911|ref|XP_002979219.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
gi|300152987|gb|EFJ19627.1| hypothetical protein SELMODRAFT_110655 [Selaginella moellendorffii]
Length = 1143
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 169/405 (41%), Gaps = 26/405 (6%)
Query: 40 YGKALQLSE---WLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFR-GEVV 95
YG+A ++ E LE + K D E S + L K R KA + ++ ESF
Sbjct: 670 YGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLLLHRVLESFTLDSAA 729
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK 155
Y L N + V AE + +RM+DKGF V L+ Y + + +V L K
Sbjct: 730 YNQLTINFLKAGQVPPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTKL----K 785
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ F Y ++ N L +VE M+ G++ DS +IL Y G E
Sbjct: 786 PELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGLVED 845
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD-QVARIWKLCES---------NPWLD 265
A+A++ GD + L + Y + KAD + R+ K ++ P L
Sbjct: 846 ADALIHMARGDGIP-------LDIVAYNTIIKADLRAGRLKKAIDTYSSLTNLGLRPSLQ 898
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I + K + +AE +FK + + K Y+ ++ YA M DL + M
Sbjct: 899 TYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAM 958
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
G ++++ L+ + G+ KA+ +L++ + P +++L++ YA RG
Sbjct: 959 KLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAG-CPPSSVTFLLLISAYAHRGK 1017
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMR 430
+ E RM+ + + ++ A+ A+ P+ + ++
Sbjct: 1018 CNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLK 1062
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 153/356 (42%), Gaps = 18/356 (5%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLL 151
EV + T++ N + ++ M +G +S +LI L+K +++AD L
Sbjct: 311 EVAFSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLI---HLNKAERLADAAL 367
Query: 152 LME---KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
L E +E+V+L+ +Y ++I I + +V EAM G PDS ++
Sbjct: 368 LWEDLVEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLG 427
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPW 263
GR ++A + M+ L +++ +L + + K + A I+ K C +
Sbjct: 428 KLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEV 487
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
V + I +GK +EAE +F+ M++ + K ++ + V ++ +++
Sbjct: 488 --VYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVME 545
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
++ G ++ AW L+ +V+ G VE+A + M +Y ++ YA+
Sbjct: 546 ELLAKGLNLDDTAWKTLLHCYVKAGNVERATKTFKTLVESGIADLM--AYNDMLSLYAEF 603
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG--IRDRMRADNVFPN 437
+ + +F +++ F T+V+ Y NA A + +MR P+
Sbjct: 604 DMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPD 659
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 140/328 (42%), Gaps = 6/328 (1%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVVYRT 98
YGKA + + +L Y+S + + L+KA ++K+ + + + V +
Sbjct: 772 YGKAGRYEVLTKLKPELPRNNFVYSSMVGALINCNQLEKAAGLVEKMRQIGLKCDSVLVS 831
Query: 99 LLANCVA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKE 156
+L N + V+ A+ + + + G P+ A N ++ R + KK D +
Sbjct: 832 ILLNAYSKAGLVEDADALIHMARGDGIPLDIVAYNTIIKADLRAGRLKKAIDTYSSLTNL 891
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
++ + +Y +I + +S +++ + +KS G +PD + + Y G E A
Sbjct: 892 GLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHA 951
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEA 273
+ + M+ L+ H + L+ YA G KA+Q+ P + I A
Sbjct: 952 ADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISA 1011
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K EAE +RM + + +HY ++ ++ ++ S+ + +M SG
Sbjct: 1012 YAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLPSQAMESYLKMERSGIQPD 1071
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQ 361
++ ++++ +EG E+ S+ K +
Sbjct: 1072 VVSSRTMIRILLEGSMFEEGLSLYKKTE 1099
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILI 169
+A +VF M+ + + ++ +L + ++ DK ++A + M+ + + + Y +I
Sbjct: 434 EAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVI 493
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM--EGDN 227
I G++ +++ + M + D T +++A + G+ +A +++E+ +G N
Sbjct: 494 SIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLN 553
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA---AIEAWGKLNKVEEAE 284
L + W + LL Y + G ++ + +K + D+ MA + + + + +E+A+
Sbjct: 554 LDDTAW--KTLLHCYVKAGNVERATKTFKTLVESGIADL-MAYNDMLSLYAEFDMLEDAK 610
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+F+++ + + + ++K+Y + M++ +++++QM E G + L+ +
Sbjct: 611 LLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAY 670
Query: 345 VEGGEVEKADSIL 357
E +E+A +L
Sbjct: 671 GEANRIEEAAGLL 683
>gi|193806501|sp|Q9C7F1.2|PPR61_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g28020
Length = 566
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 161/326 (49%), Gaps = 15/326 (4%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
I L ++ ++GN ++ + + + + LR +ALQ+SEW+ K + I D+A+ L
Sbjct: 52 IIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARL 111
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPV 126
LI + GL++AE + + IP++ RG+ VY +LL + + + KAE F +M+D G +
Sbjct: 112 HLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLL 171
Query: 127 TSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N ++ LY L +++KV ++LL M+ +V+ + ++ + D+T M++ +
Sbjct: 172 RPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFL 231
Query: 186 EAMKS-EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLLPLYA 243
+ GI+ + T +AK Y+ KA ML+ E + K + L+ LY
Sbjct: 232 NKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYG 291
Query: 244 ELGKADQVARIWKLCES-------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
E G ++V R+WKL +S N + V + + K++ + AE ++K +
Sbjct: 292 EAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLL----KVDDIVGAEEIYKVWESLPLE 347
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLV 322
+ T L Y D M K + L+
Sbjct: 348 FDHRIPTMLASGYRDRGMTEKAEKLM 373
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 19 GNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQK 78
G+ + +++ + NLR + + KALQ+SEW+ + + DYA+ L L + GL++
Sbjct: 395 GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEE 454
Query: 79 AESYIQKIPESFRGEVVYRTLLANCVA-----GNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
AE Y + IPE+ + VY LL++ GN V +E+ M++ N
Sbjct: 455 AEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMV---DEILREMEENNVDPDLITVNH 511
Query: 134 LLILY 138
+L +Y
Sbjct: 512 VLKVY 516
>gi|226533322|ref|NP_001142217.1| uncharacterized protein LOC100274385 [Zea mays]
gi|194707648|gb|ACF87908.1| unknown [Zea mays]
gi|414870857|tpg|DAA49414.1| TPA: hypothetical protein ZEAMMB73_857299 [Zea mays]
Length = 472
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 193/430 (44%), Gaps = 21/430 (4%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCV 104
QLS W+ + L D A LDLI+K+ GL+KA Y +P+ R Y +LL V
Sbjct: 48 QLSFWMTDRRHLHLSVGDVAYRLDLISKVHGLEKAVEYFGMVPKQLRKPQCYGSLLKCYV 107
Query: 105 AGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQF 163
V KAEE F +M++ G +S+A ++ LY + + ++V + ME++ VK F
Sbjct: 108 EAKAVDKAEEHFAKMQEMGM-TSSYAYTWMMKLYLQTGQLERVHAMFQDMEEKGVKPDTF 166
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
S + ++ + D+ G+ +V++ A A ++ G + A L E
Sbjct: 167 SVEAMLAAYIAAEDVQGVGKVLDKANPHEKLVTWHGHASAASLFMKSGMQVGAVMALVEA 226
Query: 224 EGD-NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--PWLDVCMAAIEAWGKLNKV 280
E + K R LL Y ELG + RIW + +S P + M+ + A + N +
Sbjct: 227 ERRISPKSSRIAYAFLLKTYTELGMHAEAGRIWSVYKSKVPPCNTMYMSRLSALLRTNDI 286
Query: 281 EEAEAVFKRMSKTWKKLSTKHY-----TALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
+ AEA K W+ + +++ ++ Y ++ K LV + G
Sbjct: 287 DGAEATLKE----WETVPLRYHDFRLINVMVDAYCREGLVEKAVALVDGAIKKGRTPYAN 342
Query: 336 AWDALVKLHVEGGEVEKADSILLKA--QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
W L + G+V +A + KA ++P ++ ++ ++ + + D+ + E++
Sbjct: 343 TWYKLAGGFFKTGQVPEAVDMTRKALDSATPPWRPDLANVLMSLNHFVDQKDVGAAEEMV 402
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPN----KALAAQVAQVDA 449
++++ + R + L++ Y+ A P + +RM+ D + + + LA + +VD
Sbjct: 403 STLQKLVPLTR-DVYHCLLKTYVRAGKPPSDLLERMKEDGLEADEETERILAGECERVDM 461
Query: 450 FRKTAVSELL 459
+ + L+
Sbjct: 462 HPLSITNHLI 471
>gi|15217811|ref|NP_174123.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322989|gb|AAG51479.1|AC069471_10 hypothetical protein [Arabidopsis thaliana]
gi|332192782|gb|AEE30903.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 161/326 (49%), Gaps = 15/326 (4%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
I L ++ ++GN ++ + + + + LR +ALQ+SEW+ K + I D+A+ L
Sbjct: 52 IIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARL 111
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPV 126
LI + GL++AE + + IP++ RG+ VY +LL + + + KAE F +M+D G +
Sbjct: 112 HLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLL 171
Query: 127 TSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N ++ LY L +++KV ++LL M+ +V+ + ++ + D+T M++ +
Sbjct: 172 RPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFL 231
Query: 186 EAMKS-EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLLPLYA 243
+ GI+ + T +AK Y+ KA ML+ E + K + L+ LY
Sbjct: 232 NKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYG 291
Query: 244 ELGKADQVARIWKLCES-------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
E G ++V R+WKL +S N + V I + K++ + AE ++K +
Sbjct: 292 EAGNREEVLRVWKLYKSKIGERDNNGYRTV----IRSLLKVDDIVGAEEIYKVWESLPLE 347
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLV 322
+ T L Y D M K + L+
Sbjct: 348 FDHRIPTMLASGYRDRGMTEKAEKLM 373
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 19 GNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQK 78
G+ + +++ + NLR + + KALQ+SEW+ + + DYA+ L L + GL++
Sbjct: 395 GDQMKPSDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEE 454
Query: 79 AESYIQKIPESFRGEVVYRTLLANCVA-----GNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
AE Y + IPE+ + VY LL++ GN V +E+ M++ N
Sbjct: 455 AEKYFENIPENMKDYSVYVALLSSYAKSDKNLGNMV---DEILREMEENNVDPDLITVNH 511
Query: 134 LLILY 138
+L +Y
Sbjct: 512 VLKVY 516
>gi|326520694|dbj|BAJ92710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 10/256 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S L K+A EG E+ +L R Y AL+++EW++T+ + D E DY
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 139
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+DLI K+ G AE + +K+P + + Y LL + + KAE +F RMKD P+
Sbjct: 140 IDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPI 199
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N+++ LY + + KV + ++++NV F+Y + I S DL ++
Sbjct: 200 DVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGIL 259
Query: 186 EAMKSEGIEPDSSTQAILAKH----YVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
+ M +P+S+ +L ++ YV + + L E E + + W T LL+
Sbjct: 260 DEMSK---DPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEA-KISQREWITYDLLVI 315
Query: 241 LYAELGKADQVARIWK 256
L+A LG D+V IWK
Sbjct: 316 LHAGLGNLDRVKDIWK 331
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE F+++ K L YTALL YA KM+ K + L ++M ++ I L ++ ++
Sbjct: 152 AEDFFEKLPPAAKSLEA--YTALLHSYARSKMIDKAERLFQRMKDADLPIDVLVYNEMMT 209
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
L++ GE++K + + ++QN P +Y L + D+ + + I M
Sbjct: 210 LYISVGELDKVPILAEELKRQN-VSPDLFTYNLRISASVASMDLEAFKGILDEM 262
>gi|326504724|dbj|BAK06653.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523789|dbj|BAJ93065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 10/256 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S L K+A EG E+ +L R Y AL+++EW++T+ + D E DY
Sbjct: 80 SATEALEKWAGEGRAAPAPELRRIARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 139
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+DLI K+ G AE + +K+P + + Y LL + + KAE +F RMKD P+
Sbjct: 140 IDLITKVFGANAAEDFFEKLPPAAKSLEAYTALLHSYARSKMIDKAERLFQRMKDADLPI 199
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N+++ LY + + KV + ++++NV F+Y + I S DL ++
Sbjct: 200 DVLVYNEMMTLYISVGELDKVPILAEELKRQNVSPDLFTYNLRISASVASMDLEAFKGIL 259
Query: 186 EAMKSEGIEPDSSTQAILAKH----YVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
+ M +P+S+ +L ++ YV + + L E E + + W T LL+
Sbjct: 260 DEMSK---DPNSNEGWMLYRNLASIYVDASQLVSSGNSLVEAEA-KISQREWITYDLLVI 315
Query: 241 LYAELGKADQVARIWK 256
L+A LG D+V IWK
Sbjct: 316 LHAGLGNLDRVKDIWK 331
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE F+++ K L YTALL YA KM+ K + L ++M ++ I L ++ ++
Sbjct: 152 AEDFFEKLPPAAKSLEA--YTALLHSYARSKMIDKAERLFQRMKDADLPIDVLVYNEMMT 209
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
L++ GE++K + + ++QN P +Y L + D+ + + I M
Sbjct: 210 LYISVGELDKVPILAEELKRQN-VSPDLFTYNLRISASVASMDLEAFKGILDEM 262
>gi|15217734|ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein [Arabidopsis thaliana]
gi|332189300|gb|AEE27421.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
++ TL ++ EG + + ++ LR R A ++ +W+E +K+ F D+A C
Sbjct: 86 TVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWME-KRKMTFSVSDHAIC 144
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFP 125
LDLI K +GL+ AE+Y + S + L NC +KA+ F M + F
Sbjct: 145 LDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFV 204
Query: 126 VTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
S N ++ +Y RL + + VL+ M++ + +Y I + G NDL G++++
Sbjct: 205 NNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKI 264
Query: 185 VEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
++ M K + +T + LA Y G EKA++ LK ME +R + L+ LYA
Sbjct: 265 IDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYA 324
Query: 244 ELGKADQVARIWK-LCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRM-SKTW 294
+ K +V R+W+ L ++ P ++ + ++A KL ++ + +F SK W
Sbjct: 325 GISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCW 379
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 30/318 (9%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTS---FACNQLLILYKRLDKKKVA 147
R +Y+ L V G V E N+ +G V F C + L ++R +
Sbjct: 69 RQRELYKKLSMLSVTGGTVA---ETLNQFIMEGITVRKDDLFRCAKTLRKFRR--PQHAF 123
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
++ MEK + + + I +D+ G++ L + + + ST L Y
Sbjct: 124 EIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSA-KNHQSTYGALMNCY 182
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC 267
+EKA+A + M+ N + ++ +Y L + ++V + + + C
Sbjct: 183 CVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRG-ISPC 241
Query: 268 MAAIEAW----GKLNKVEEAEAVFKRMSK-TWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
W G LN ++ E + M K + K + ++ L +Y + K +
Sbjct: 242 GVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSAL 301
Query: 323 KQMAESGCHIGPLAWDA---LVKLHV---EGGEVEKADSILLKAQQQ-NKFKPMFSSYML 375
K M E + P D+ L+ L+ +G EV + L KA+ + N SY++
Sbjct: 302 KSMEE---KMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNL-----SYLV 353
Query: 376 IMDQYAKRGDIHSTEKIF 393
++ +K GD+ +KIF
Sbjct: 354 MLQAMSKLGDLDGIKKIF 371
>gi|147766620|emb|CAN73943.1| hypothetical protein VITISV_032243 [Vitis vinifera]
Length = 448
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 165/363 (45%), Gaps = 22/363 (6%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P SI L ++ EEG +S+ ++ + ++ R + AL++S+W+ + D
Sbjct: 34 PKASISPLLNQWIEEGQTVSKPQLQSLVRIMKDFRRFHHALEISQWMTDRRYFTLTPSDA 93
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI+ +P + G Y LL+ V +V+KAE +M++
Sbjct: 94 AIRLDLISM-------------VPWTXAGXDAYGALLSGYVREKSVEKAEATMQKMREMD 140
Query: 124 FPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F +SF N L+ LY + + K+ ++ M+ + + F+ L+ ++D++ M+
Sbjct: 141 FATSSFPYNMLINLYSQTGNHGKIEALIQEMQXKAIPCDAFTVXNLMVAYVAASDISAME 200
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC-RLLLP 240
+ + M+ + I D + ++ A Y+ G +KA MLK++E + R + + LL
Sbjct: 201 KXLNRMEEDPHISVDWNIYSVAASGYLKVGLIDKALEMLKKIESNRPHLERXSAFKXLLS 260
Query: 241 LYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
LYA ++ R+W L + + P CM I KL+ +E AE +F+
Sbjct: 261 LYARTXHKQELYRVWNLYKPSYEYPEAYSCM--ITCLTKLDDIEGAEKIFQEWECECTMY 318
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ LL Y + K + LV ++ E W+ L K +VE ++ KA +L
Sbjct: 319 DFRVLNRLLSAYCKRCLFDKAESLVNKVIEERMPYAS-TWNILAKGYVEDKQMPKAVEML 377
Query: 358 LKA 360
KA
Sbjct: 378 KKA 380
>gi|388490914|gb|AFK33523.1| unknown [Lotus japonicus]
Length = 358
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 133/257 (51%), Gaps = 5/257 (1%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + L K+ EGN ++ +E+ LR + Y AL++SEW+ T+++ + DY
Sbjct: 62 PKRSATNILHKWVLEGNSVTVSELRDIAKELRRSQRYKHALEISEWMITHEEHGLSDSDY 121
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A +DL+ K+ G+ AE Y + +P + + Y LL + +KAEE++ R+KD
Sbjct: 122 AMRIDLMTKVFGIDAAERYFEALPVAAKTSETYTALLHSYAGAKMTEKAEELYQRIKDSN 181
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ N+++ LY + + +KV V+ +++ NV F+Y + I + ++ +
Sbjct: 182 LSFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRNVSPDIFTYNLWISSCAATLNIDEVR 241
Query: 183 QVVEAMKSEGIEPDSSTQAI-LAKHYVSGGRKEKAEA-MLKEMEGDNLKEHRW-TCRLLL 239
++++ M +S T+ + LA YV+ R + + + L E E + + +W T L+
Sbjct: 242 RILDEMSHGADSNESWTRYLNLANVYVTASRLDNSSSNSLAETE-KRITQSQWITYDFLI 300
Query: 240 PLYAELGKADQVARIWK 256
LYA LG D++ +IW
Sbjct: 301 ILYAGLGSKDKLDQIWN 317
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+ K+ ++ AE F+ + K +++ YTALL YA KM K ++L +++ +S
Sbjct: 125 IDLMTKVFGIDAAERYFEALPVAAK--TSETYTALLHSYAGAKMTEKAEELYQRIKDSNL 182
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
L ++ ++ L++ G+VEK S++ + +Q+N P +Y L + A +I
Sbjct: 183 SFDALTYNEMMTLYMSVGQVEKVPSVVEELKQRN-VSPDIFTYNLWISSCAATLNIDEVR 241
Query: 391 KIFHRM 396
+I M
Sbjct: 242 RILDEM 247
>gi|255563224|ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538091|gb|EEF39702.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 426
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 160/343 (46%), Gaps = 25/343 (7%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + + + EGN ++ +E+ LR + Y AL++SEW+ TNK+ + ++ DY
Sbjct: 86 PKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYKHALEISEWMVTNKEFELMDFDY 145
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A+ +DL+ K+ G+ AE Y + +P + + Y LL + + KAEE++ R+K
Sbjct: 146 ATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQLGKAEELYERIKGSN 205
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
T+ N+++ LY + + +KV+ V+ ++++ + F+Y + I ++ +
Sbjct: 206 LSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWISSCAAILNIDQVT 265
Query: 183 QVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
++++ MK + G D +A YV G E+ ++ + W T L+
Sbjct: 266 RILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKSITQREWITYDFLII 325
Query: 241 LYAELGKADQVARIW--------KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
LYA L D+V +IW K+ N VC+ + ++ L ++EA V +
Sbjct: 326 LYAGLRDKDKVDQIWKSLRMTKQKMTNRNF---VCI--LSSYMMLGHLKEAGEVLDQ--- 377
Query: 293 TWKKLSTKHY-----TALLKVYADHKMLSKGKDLVKQMAESGC 330
WKK +T + + LL ++ + D + E C
Sbjct: 378 -WKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNC 419
>gi|296086986|emb|CBI33242.3| unnamed protein product [Vitis vinifera]
Length = 335
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 3/239 (1%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P+ S+ L + + GN + AE+ + +LR R+ + +AL++SEW+ F ++
Sbjct: 51 PNTSVVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEH 110
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDLI ++RG AESY + + + Y LL V K+ +MK+ G
Sbjct: 111 AVQLDLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMG 170
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F + N ++ LY + + +KV DVL M++ NV FSY+I I+ G +D+ GM+
Sbjct: 171 FASSPLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGME 230
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
V++ M+ + D L Y S G KAE + N++ + R+++P+
Sbjct: 231 NVLKEMERQPHIRDGLGYNHLISLYASLG--NKAEVLRLWSLEKNVEAFVGSLRIVIPM 287
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
G++ AE+ F + K + K Y ALL Y + K +++M E G P
Sbjct: 118 GRVRGFLSAESYFNSLQNHDK--TDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASSP 175
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
L ++ ++ L+ G+ EK +L + +Q N + F SY + ++ Y + DI E +
Sbjct: 176 LTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNF-SYRICINSYGAQSDIQGMENVLK 234
Query: 395 RMRQVGYVARFKQFQTLVQAY 415
M + ++ + L+ Y
Sbjct: 235 EMERQPHIRDGLGYNHLISLY 255
>gi|356510143|ref|XP_003523799.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 530
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 194/439 (44%), Gaps = 23/439 (5%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
L + +EGND+S +E+ L + Y AL++ +W+E K I DYA L+LI
Sbjct: 75 LKNWVDEGNDVSHSELRRIARTLVKSKCYHHALEVVKWIENQKNFHMIPADYAMKLELII 134
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
+ L +AE Y +P+S + TLL + + KAE ++ + G ++
Sbjct: 135 ENYDLMEAEEYFMNLPDSAAKKAACLTLLRGYIRVRDTNKAETFMVKLYELGLVLSPHPF 194
Query: 132 NQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAM 188
N+++ LY + +KV V+ M++ V SY + ++ + + + ++ V M
Sbjct: 195 NEMMKLYLATCEYRKVPLVMQQMKRNKVPCNVLSYNLWMNACTEEEGYGVAAVETVFRQM 254
Query: 189 KSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
+++ +E S+ A LA Y G+ +KA +LK+ E +R L+ LYA L +
Sbjct: 255 QNDRNVEVGWSSLATLANAYKKAGQSKKAILVLKDAERKLSTCNRLGYFFLITLYASLKE 314
Query: 248 ADQVARIWKL---------CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ V R+W+ C + + +C+ KL + +A+ +F +K
Sbjct: 315 KEGVLRLWEASKAVGGRISCANYICILICLV------KLGDIVQAKRIFLEWESNCQKYD 368
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
+ LL YA + + + + L + G + L++ +V ++++A +
Sbjct: 369 IRVSNVLLGAYARNGSMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMK 428
Query: 359 KAQQQNK---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+A K ++P + I + K G++ K +R G + ++ L++ +
Sbjct: 429 RALAMMKDCHWRPPHGLVLAIAEYLEKDGNLKYANKYITDLRNFGLFS-LSLYKILLRMH 487
Query: 416 INAKTPAYGIRDRMRADNV 434
++A P + I M D +
Sbjct: 488 LSANKPPFHILKMMDEDKI 506
>gi|343172216|gb|AEL98812.1| pentatricopeptide repeat-containing protein, partial [Silene
latifolia]
Length = 359
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 11/357 (3%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTL 99
Y AL+LS+ + K ++ D A LDLI K G+ AE+Y +PES + Y L
Sbjct: 1 YYAALKLSDTMAW-KGMNMTINDQAIHLDLIGKTHGVAAAENYFIDLPESSKNIECYGAL 59
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENV 158
L KAE + +MK+ G P+T+ + N L+ LY + +KV ++ M+ ++
Sbjct: 60 LNIYCKELIPDKAEALMEKMKELGLPITAMSYNSLMTLYSKTGLPEKVPALVQEMKASDI 119
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAE 217
L ++Y + + D+ G+++V++ MK +G + D +T + LA YV +KAE
Sbjct: 120 MLQTYTYNVWMRALAAVKDIYGVERVLDEMKRDGRVAEDWTTYSNLASIYVESKMFDKAE 179
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAW 274
LKE+E N + LL LY + G +V R+W +L + I+
Sbjct: 180 NALKELEKRNTSRELSPYQFLLTLYGKTGNLIEVYRLWRSLRLAFPKTPNVAYLNMIQRL 239
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
L ++ AE F + + L+ Y L + K+L K+ + G
Sbjct: 240 VTLKDLKGAEKCFADWESSCTNYDIRIANVLMGAYIKDGSLQQAKELKKRACKRGAKPNA 299
Query: 335 LAWDALVKLHVEGGEVEKADSILLKA-----QQQNKFKPMFSSYMLIMDQYAKRGDI 386
W+ ++ +++ GEV+ A + +A +K+ P + IM + + D+
Sbjct: 300 KTWEIFLEHYLKAGEVKLAVDCVERAVAIGRGDGSKWVPSTNVVNSIMGHFEQSKDV 356
>gi|297729245|ref|NP_001176986.1| Os12g0527850 [Oryza sativa Japonica Group]
gi|255670359|dbj|BAH95714.1| Os12g0527850 [Oryza sativa Japonica Group]
Length = 313
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 2/243 (0%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S L ++AEEG + + ++ + LR R + AL++ EW+ T ++ + D+
Sbjct: 40 PKRSAAVVLRRWAEEGRTVQKYQLNRVVRELRKYRRFKHALEICEWMRTQPEMRLLPGDH 99
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A LDL+AK+RGL AE + + +PE +G LL V KAE + M G
Sbjct: 100 AVHLDLVAKVRGLPSAEKFFEDMPERAKGPSTCNALLHAYVQHGRRDKAEAMLEEMAKAG 159
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ + N ++ LY + +KV +++ + + + +Y I + + N + +
Sbjct: 160 YLTCALPFNHMMSLYMSSGELEKVPEMIKELRRYTIP-DLVTYNIWLTYCSKKNSVKAAE 218
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+V + MK E + PD T ++L Y++ G K L EME ++ R LL LY
Sbjct: 219 KVYDLMKDERVVPDWMTFSLLGSIYINAGLHVKGRDALVEMEKRASRKERAAYSSLLTLY 278
Query: 243 AEL 245
A L
Sbjct: 279 ASL 281
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K+ + AE F+ M + K ST ALL Y H K + ++++MA++G
Sbjct: 107 AKVRGLPSAEKFFEDMPERAKGPST--CNALLHAYVQHGRRDKAEAMLEEMAKAGYLTCA 164
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
L ++ ++ L++ GE+EK ++ + ++ P +Y + + +K+ + + EK++
Sbjct: 165 LPFNHMMSLYMSSGELEKVPEMIKELRRYT--IPDLVTYNIWLTYCSKKNSVKAAEKVYD 222
Query: 395 RMRQVGYVARFKQFQTLVQAYINA 418
M+ V + F L YINA
Sbjct: 223 LMKDERVVPDWMTFSLLGSIYINA 246
>gi|359484901|ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial [Vitis vinifera]
Length = 396
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 163/348 (46%), Gaps = 35/348 (10%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S+ + L ++ EGN + +E+ LR + Y AL++SEW+ ++ + + + D
Sbjct: 56 PKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSHDEFELSDSDN 115
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A +DL+ ++ G+ AE Y + +P + + Y LL + +KAEE++ R+K+
Sbjct: 116 AVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESN 175
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
P+ N+++ LY + + +KV+ V+ ++++ V F+Y + + + D+ G+
Sbjct: 176 VPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVR 235
Query: 183 QVVEAMKSEGIEPDS-------STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-T 234
++++ M + D + I+A H V+ EA G N + W T
Sbjct: 236 RILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASNSVVEA------GTNTTQRDWIT 289
Query: 235 CRLLLPLYAELGKADQVARIWKL-------CESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
L+ LYA LG D++ +IWK +S + VC+ + ++ L +++ V
Sbjct: 290 YDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSY--VCI--LSSYVMLGHIKDVGIVI 345
Query: 288 KRMSKTWKKLSTKHYTA-----LLKVYADHKMLSKGKDLVKQMAESGC 330
WKK +T + LL +A+ +++ + + K + C
Sbjct: 346 DE----WKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIRKSC 389
>gi|17529324|gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
++ TL ++ EG + + ++ LR R A ++ +W+E +K+ F D+A C
Sbjct: 86 TVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWME-KRKMTFSVSDHAIC 144
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFP 125
LDLI K +GL+ AE+Y + S + L NC +KA+ F M + F
Sbjct: 145 LDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFV 204
Query: 126 VTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
S N ++ +Y RL + + VL+ +++ + +Y I + G NDL G++++
Sbjct: 205 NNSLPFNNMMSMYMRLSQPEKVPVLVDAIKQRGISPCGVTYSIWMQSCGSLNDLDGLEKI 264
Query: 185 VEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
++ M K + +T + LA Y G EKA++ LK ME +R + L+ LYA
Sbjct: 265 IDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYA 324
Query: 244 ELGKADQVARIWK-LCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRM-SKTW 294
+ K +V R+W+ L ++ P ++ + ++A KL ++ + +F SK W
Sbjct: 325 GISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCW 379
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 127/318 (39%), Gaps = 30/318 (9%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTS---FACNQLLILYKRLDKKKVA 147
R +Y+ L V G V E N+ +G V F C + L ++R +
Sbjct: 69 RQRELYKKLSMLSVTGGTVA---ETLNQFIMEGITVRKDDLFRCAKTLRKFRR--PQHAF 123
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
++ MEK + + + I +D+ G++ L + + + ST L Y
Sbjct: 124 EIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSA-KNHQSTYGALMNCY 182
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC 267
+EKA+A + M+ N + ++ +Y L + ++V + + + C
Sbjct: 183 CVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAIKQRG-ISPC 241
Query: 268 MAAIEAW----GKLNKVEEAEAVFKRMSK-TWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
W G LN ++ E + M K + K + ++ L +Y + K +
Sbjct: 242 GVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSAL 301
Query: 323 KQMAESGCHIGPLAWDA---LVKLHV---EGGEVEKADSILLKAQQQ-NKFKPMFSSYML 375
K M E + P D+ L+ L+ +G EV + L KA+ + N SY++
Sbjct: 302 KSMEE---KMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNL-----SYLV 353
Query: 376 IMDQYAKRGDIHSTEKIF 393
++ +K GD+ +KIF
Sbjct: 354 MLQAMSKLGDLDGIKKIF 371
>gi|42570837|ref|NP_973492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|119935915|gb|ABM06033.1| At2g20710 [Arabidopsis thaliana]
gi|330251966|gb|AEC07060.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 395
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 164/352 (46%), Gaps = 9/352 (2%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNR 118
E D A LDLIAK+ GL +AE + + IP R +Y LL NC A V KAE+VF
Sbjct: 11 EGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALL-NCYASKKVLHKAEQVFQE 69
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSND 177
MK+ GF N +L LY R K + + LL ME E VK F+ + +D
Sbjct: 70 MKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSD 129
Query: 178 LTGMDQ-VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTC 235
+ GM++ ++ +G+ D T A A Y+ G EKA ML++ E N ++ +
Sbjct: 130 VEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAY 189
Query: 236 RLLLPLYAELGKADQVARIWKLC-ESNPWLDVC-MAAIEAWGKLNKVEEAEAVFKRMSKT 293
+L+ Y GK ++V R+W L E + + + ++ I A K++ +EE E + +
Sbjct: 190 EVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAG 249
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ L+ Y M+ K +++V + + W+ L + G++EKA
Sbjct: 250 HSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKA 309
Query: 354 DSILLKAQQQNK--FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+A + +K ++P M +D + D+ KI + + G+++
Sbjct: 310 VEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHIS 361
>gi|357142115|ref|XP_003572464.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01990,
mitochondrial-like [Brachypodium distachyon]
Length = 546
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 193/443 (43%), Gaps = 17/443 (3%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
DAP + + L ++ E LS ++ + LR+ R Y +AL+L +W+E +
Sbjct: 95 DAPLGCLAAELDQWLRERRPLSEQQLFSYVRKLRSYRHYKRALELMDWMEA-RGASLQLG 153
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNN-VKKAEEVFNRMK 120
+A L L+ K+ GL+ AE Y +PE F+ Y +LL NC A + K E+F +MK
Sbjct: 154 HHAVRLGLVCKVNGLEAAEEYFWSLPEMFKSIKTYSSLL-NCYAEHRKADKGLELFEKMK 212
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
++ N L+ LY + D+ +K+ M + +V+ F+Y +L NDL
Sbjct: 213 AMNITPSTLVYNNLMDLYLKTDQPEKIPTTFEQMRENHVRTDSFTYYMLTQSYIMVNDLK 272
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
++ VE ++ P S +LA +Y + +KA LK+ E + LL
Sbjct: 273 SAEKFVEELEKSTPVP-WSLYTVLANNYNKLAQFDKAVLALKKAEEVMDRSEISAWHNLL 331
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVC-----MAAIEAWGKLNKVEEAEAVFKRMSKTW 294
LYA G + +V R+W+ +S C + + A KL+ + + +F+ T
Sbjct: 332 SLYASSGNSSEVKRVWESLKSA--FTKCINRSYLVMLSALKKLDDFDSLQQLFQEWESTH 389
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
++ + +++ Y M + + L +Q A + H + V ++E +A
Sbjct: 390 ERYDMRITNVMIEAYLAKDMTDEAEAL-RQTAMAKGHSNVTTFYIFVVSYLEKSRTSEAL 448
Query: 355 SILLKAQQQNKFKPMFSSYMLI---MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
I A++ K L+ + + + D+ E + ++++G + + + L
Sbjct: 449 DIWRDAEKMVKTPNWVPPKELVTRFLKHFEEAKDVDGMEAFWEHLKKLGCLDA-EAYGAL 507
Query: 412 VQAYINAKTPAYGIRDRMRADNV 434
++ Y A I R+ D V
Sbjct: 508 IRTYAAAGRTNTSISRRIEEDRV 530
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 178/383 (46%), Gaps = 25/383 (6%)
Query: 26 EIALAMANLRTRRMYGKALQLSEW--LETNKKLDFIERDYASCLDLIAKLRG----LQKA 79
+I LR R+ + + + W L ++ K D I C +L+ G ++A
Sbjct: 128 DILTVSVQLRMRKQWDSIISICRWILLRSSFKQDVI------CYNLLIDAFGQKFLYKEA 181
Query: 80 ES-YIQKI-PESFRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI 136
ES Y+Q + E Y L+ A C++G ++KAE VF MK+ G P ++ N +
Sbjct: 182 ESTYLQLLEARCIPNEDTYALLIKAYCLSGL-LEKAEAVFVEMKNYGLPSSAVVYNSYIN 240
Query: 137 -LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
L K + K ++ L M+++ K + +Y +LI++ G+ +V M S +P
Sbjct: 241 GLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKP 300
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
+ T L + G EKAE + ++M+ L+ ++ L+ Y+ G A I+
Sbjct: 301 NICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIF 360
Query: 256 KL-----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
L CE P ++A+G+ + +AEAVF+ M + + K + LL ++
Sbjct: 361 SLMQHMGCE--PDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFS 418
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
+SK +D++ QM +SG + ++++ L+ G+ K + + L + +
Sbjct: 419 KTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEV-LTVMENGSCEADI 477
Query: 371 SSYMLIMDQYAKRGDIHSTEKIF 393
S+Y +++++Y + G I E +F
Sbjct: 478 STYNILINRYGQAGFIDKMEGLF 500
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 4/267 (1%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
++ + + K Y +LID GQ + + P+ T A+L K Y G
Sbjct: 152 ILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSG 211
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCM 268
EKAEA+ EM+ L + + G ++ I+ K P +
Sbjct: 212 LLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYT 271
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I +GK K A VF M K + YTAL+ +A + K +++ +QM E+
Sbjct: 272 MLINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA 331
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G +++AL++ + G A I Q +P +SY +++D Y + G ++
Sbjct: 332 GLEPDVYSYNALMEAYSRAGFPYGAAEIF-SLMQHMGCEPDRASYNILVDAYGRAGFLND 390
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
E +F M++VG K L+ A+
Sbjct: 391 AEAVFEDMKRVGITPTMKSHMVLLSAF 417
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 173/385 (44%), Gaps = 14/385 (3%)
Query: 73 LRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
LR + K E K P+S +++ +++ N+K+A ++F +MK+ G T+ N
Sbjct: 68 LRLISKVEENGMK-PDS----ILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFN 122
Query: 133 QLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+ Y K + A LL ++ VK Q +Y IL+ ++ +V M +
Sbjct: 123 TLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVAS 182
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
G++PD+ T LA+ Y G +AE M+ EM + + TC +++ Y + G
Sbjct: 183 GMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDA 242
Query: 252 AR-IWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
+R ++++ E P L V + I+ + E + V M + + ++ ++
Sbjct: 243 SRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNA 302
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
++ + K K++ M ++ A+ L K +V GE EKA+SI L + ++ P
Sbjct: 303 WSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESI-LTSMRKYGVHP 361
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIR 426
++ + G + K++ +M ++G K ++TL+ Y AK P A +
Sbjct: 362 NVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELL 421
Query: 427 DRMRADNVFPNKALAAQVAQVDAFR 451
M VFP K +A DA+R
Sbjct: 422 QVMEEKGVFPKKGTMQLIA--DAWR 444
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K EA ++F + K + YT L+ K+ L+ ++ E+G + ++
Sbjct: 28 KPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFN 87
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+++ E G +++A L + +++ KP S++ ++ Y G K+ ++
Sbjct: 88 SIINAFSESGNMKEAMK-LFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQD 146
Query: 399 VGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQVDA 449
G + + LV+A+ N + A+ + +M A + P+ +A+ A
Sbjct: 147 GGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYA 199
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 185/422 (43%), Gaps = 17/422 (4%)
Query: 34 LRTRRMYGKALQLSEWL--ETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES-- 89
LR R + + + EW+ ++ + D I Y +D + R L +AE+ + E+
Sbjct: 146 LRLNRQWEPIITVCEWVLRRSSFRPDII--CYNLLIDAYGQKRQLSEAEAAYMALLEARC 203
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--ILYKRLDKKKVA 147
E Y LL + +AE V + M+ G P T+ N L +L R +K V
Sbjct: 204 VPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAV- 262
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
+V M+KE + +Y ++I++ G++N +V MKS G +P+ T L +
Sbjct: 263 EVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAF 322
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE---SNPWL 264
G EKAE + +EM+ + + L+ Y+ G + I+ L E P
Sbjct: 323 AREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDR 382
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
++A+G+ +EAEA F+ + + + + K + LL +A +++ ++++ Q
Sbjct: 383 ASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ 442
Query: 325 MAESGCHIGPLAWDALVKLHVEGG---EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ +SG A +A++ + G ++E+ + + + + P S+Y ++++ Y
Sbjct: 443 LHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYG 502
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPNKA 439
+ G + E F + G A + + + AY K +R + M +P+
Sbjct: 503 RAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAG 562
Query: 440 LA 441
A
Sbjct: 563 TA 564
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 21/275 (7%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEEVF M+ G +A N L+ Y R + +++ LME
Sbjct: 316 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEH 375
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA----MKSEGIEPDSSTQAILAKHYVSGG 211
+ + SY IL+D G++ G+ Q EA +K +G+ P + +L + G
Sbjct: 376 MGCEPDRASYNILVDAFGRA----GLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSG 431
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-------PWL 264
+ E ++ ++ L+ + +L Y G+ D + R++ E P
Sbjct: 432 NVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDT 491
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ A+G+ ++ EA F+ ++ +T+ + YA K + + ++
Sbjct: 492 STYNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEE 551
Query: 325 MAESGCHIGPLAWDALVKLHVEGGE--VEKADSIL 357
M ++GC+ P A A V L E VE+ +I+
Sbjct: 552 MVDAGCY--PDAGTAKVLLAACSDERQVEQVTAIV 584
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 29/214 (13%)
Query: 270 AIEAWGKLNKVEEAE---------AVFKRMSKTWKKLSTKH---------------YTAL 305
A W L+K+ +A AV R+++ W+ + T Y L
Sbjct: 119 AASVWESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLL 178
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ Y + LS+ + + E+ C + L++ + G++ +A+ ++ + Q+N
Sbjct: 179 IDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISE-MQRNG 237
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
P + Y +D K +++ RM++ + + ++ Y A P +
Sbjct: 238 IPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYGKANQPMSSL 297
Query: 426 R--DRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
R M++ PN + A V+AF + + E
Sbjct: 298 RVFREMKSVGCKPN--ICTYTALVNAFAREGLCE 329
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 184/422 (43%), Gaps = 17/422 (4%)
Query: 34 LRTRRMYGKALQLSEWL--ETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES-- 89
LR R + + + EW+ ++ + D I Y +D + R L +AE+ + E+
Sbjct: 146 LRLNRQWEPIITVCEWVLRRSSFRPDII--CYNLLIDAYGQKRQLSEAEAAYMALLEARC 203
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--ILYKRLDKKKVA 147
E Y LL + +AE V + M+ G P T+ N L +L R +K V
Sbjct: 204 VPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAV- 262
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
+V M+KE + +Y ++I++ G++N +V MKS G +P+ T L +
Sbjct: 263 EVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAF 322
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE---SNPWL 264
G EKAE + +EM+ + + L+ Y+ G + I+ L E P
Sbjct: 323 AREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDR 382
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
++A+G+ +EAEA F+ + + + + K + LL +A +++ ++++ Q
Sbjct: 383 ASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ 442
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF---KPMFSSYMLIMDQYA 381
+ +SG A +A++ + G ++ + + ++ + P S+Y ++++ Y
Sbjct: 443 LHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYG 502
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPNKA 439
+ G + E F + G A + + + AY K +R + M +P+
Sbjct: 503 RAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAG 562
Query: 440 LA 441
A
Sbjct: 563 TA 564
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 29/214 (13%)
Query: 270 AIEAWGKLNKVEEAE---------AVFKRMSKTWKKLSTKH---------------YTAL 305
A W L+K+ +A AV R+++ W+ + T Y L
Sbjct: 119 AASVWESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLL 178
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ Y + LS+ + + E+ C + L++ + G++ +A+ ++ + Q+N
Sbjct: 179 IDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISE-MQRNG 237
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
P + Y +D K +++ RM++ + + ++ Y A P +
Sbjct: 238 IPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSL 297
Query: 426 R--DRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
R M++ PN + A V+AF + + E
Sbjct: 298 RVFREMKSVGCKPN--ICTYTALVNAFAREGLCE 329
>gi|449479004|ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 259
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P SI L ++ EEG ++++++ + LRT + ALQL EW +
Sbjct: 48 PRTSIVRVLDQWVEEGRQVNQSDLQKLIKQLRTFGRFNHALQLCEWERNERNKCPSPGHI 107
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A L LI+K RGL++AE Y I ES R VY LL V N+KKAE + +M++ G
Sbjct: 108 AIQLHLISKARGLEQAEEYFSSIGESSRDHKVYGALLHCYVENKNLKKAEAIMQKMREVG 167
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F T + N +L LY +L K + D L+ ME+ + +F+Y + ++ ++D+T M+
Sbjct: 168 FMKTPLSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRFTYNVRMNAYAAASDITNME 227
Query: 183 QVVEAMKSEGI 193
+++ M+++ +
Sbjct: 228 KLLSKMEADPL 238
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K +E+AE F + ++ + K Y ALL Y ++K L K + ++++M E G P
Sbjct: 115 SKARGLEQAEEYFSSIGESSR--DHKVYGALLHCYVENKNLKKAEAIMQKMREVGFMKTP 172
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQ----QNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
L+++A++ L+ + G+ EK D ++ + ++ N+F +Y + M+ YA DI + E
Sbjct: 173 LSYNAMLNLYAQLGKHEKLDELVKEMEEMGIGHNRF-----TYNVRMNAYAAASDITNME 227
Query: 391 KIFHRMRQVGYVA 403
K+ +M VA
Sbjct: 228 KLLSKMEADPLVA 240
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 160/361 (44%), Gaps = 10/361 (2%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKKKVADVLLLMEKENVKLT 161
C +G V A ++ + M G V + N LL Y R D +VA++L +ME E ++ T
Sbjct: 78 CKSGR-VAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT 136
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+Y IL+D + D+T ++ V E MKS+ + D + + Y G +A +
Sbjct: 137 VGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFD 196
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
E G+ ++ + T L+ + ++G+ A+ + ++ V I+ + + N
Sbjct: 197 ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKN 256
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
V++A + M K +L Y L + + K+L++ M E G +++
Sbjct: 257 MVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYT 316
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L+ +H G++ +A L + N +P +Y ++MD Y K+G I E+ + M +
Sbjct: 317 TLISIHCNEGDMVEARR-LFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEK 375
Query: 399 VGYVARFKQFQTLVQAY-INAKTP-AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVS 456
G V + LV + +N K A + + M+ PN L A A + K S
Sbjct: 376 KGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPN--LVAYTALISGLAKEGRS 433
Query: 457 E 457
E
Sbjct: 434 E 434
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 130/298 (43%), Gaps = 8/298 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y +D ++ R + K E+ +++ ++ G+V + + + N C AGN V++A EVF+
Sbjct: 140 YTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN-VRRASEVFDEC 198
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
G L+ + ++ + + A++L+ M+ V + Q + +ID + N +
Sbjct: 199 VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMV 258
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
++ M+ GIE D T LA R ++A+ +L+ M ++ + + L
Sbjct: 259 DKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTL 318
Query: 239 LPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ ++ G + R+++ N P L ++ + K + EAE M K
Sbjct: 319 ISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGL 378
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
Y AL+ + + + L ++M + G +A+ AL+ + G E+A
Sbjct: 379 VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEA 436
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 107/293 (36%), Gaps = 40/293 (13%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEV 115
E Y + ++ K+ ++ AE + + RG ++V+ T++ N V KA E+
Sbjct: 207 EHTYGALINGFCKIGQMEAAEMLVTDM--QVRGVGINQIVFNTMIDGYCRKNMVDKALEI 264
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQ 174
M+ G + + N L +R ++ A LL +M ++ V+ SY LI I
Sbjct: 265 KMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCN 324
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
D+ ++ M G EP T ++ Y+ G +AE EME L ++
Sbjct: 325 EGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYS 384
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + GK D R+ F+ M +
Sbjct: 385 YAALVHGHCVNGKVDVALRL--------------------------------FEEMKQRG 412
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV-KLHVE 346
K + YTAL+ A + L M G + ALV LH +
Sbjct: 413 SKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTD 465
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 178/376 (47%), Gaps = 30/376 (7%)
Query: 66 CLDLIAKLRG----LQKAESYIQKIPES--FRGEVVYRTLL-ANCVAGNNVKKAEEVFNR 118
C +L+ G +KAES ++ E+ E Y LL A C +G ++KAE VF
Sbjct: 100 CYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGL-LEKAEAVFAE 158
Query: 119 MKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ GFP ++ N + L K D +K ++ M+++ + + +Y +LI++ G+++
Sbjct: 159 MRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASK 218
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+V M+S+ +P+ T L + G EKAE + ++++ L+ +
Sbjct: 219 SYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNA 278
Query: 238 LLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
L+ Y+ G A I+ L CE + M ++A+G+ E+A+AVF+ M +
Sbjct: 279 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIM--VDAYGRAGLHEDAQAVFEVMKR 336
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ K + LL Y+ ++K +++V QM +SG ++++ L+ G+ EK
Sbjct: 337 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 396
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-------------RQV 399
+ + L A ++ + S+Y ++++ Y + G E++F + ++
Sbjct: 397 MEEV-LTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRI 455
Query: 400 GYVARFKQFQTLVQAY 415
G +R KQ+ ++ +
Sbjct: 456 GAYSRRKQYNRCLEVF 471
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 20/281 (7%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEE+F ++++ G +A N L+ Y R A++ LM+
Sbjct: 242 TALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQH 301
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY I++D G++ V E MK GI P + +L Y G+ K
Sbjct: 302 MGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAK 361
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG 275
E ++ +M +K + +L LY LG+ +++ + E P+ A I +
Sbjct: 362 CEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPY----PADISTYN 417
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKH-------YTALLKVYADHKMLSKGKDLVKQMAES 328
L + F RM + ++ L ++ +T+ + Y+ K ++ ++ ++M ++
Sbjct: 418 ILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDA 477
Query: 329 GCHI-GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
GC+ G A + L+K+ + S L+ + + F P
Sbjct: 478 GCYPDGGTAKNVLLKVAI------FMASFLVGSASPSPFSP 512
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 7/285 (2%)
Query: 140 RLDKKKVADVLL---LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD 196
RL+K+ A VL+ ++ + + Y +LID GQ + + + P
Sbjct: 73 RLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPT 132
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW- 255
T A+L K Y + G EKAEA+ EM + + G + I+
Sbjct: 133 EDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFE 192
Query: 256 --KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
K P I +GK +K A VF M K + +TAL+ +A
Sbjct: 193 RMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREG 252
Query: 314 MLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSY 373
+ K +++ +Q+ E+G A++AL++ + G A I Q +P +SY
Sbjct: 253 LCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIF-SLMQHMGCEPDRASY 311
Query: 374 MLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+++D Y + G + +F M+++G K L+ AY A
Sbjct: 312 NIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 356
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 7/199 (3%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P D ++A+ +E+AEAVF M K S Y A + K ++
Sbjct: 131 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 190
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
++M C + L+ L+ + + A + + + Q K KP ++ +++ +A
Sbjct: 191 FERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQ-KCKPNICTFTALVNAFA 249
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG---IRDRMRADNVFPNK 438
+ G E+IF ++++ G + L++AY A P YG I M+ P++
Sbjct: 250 REGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFP-YGAAEIFSLMQHMGCEPDR 308
Query: 439 ALAAQVAQVDAFRKTAVSE 457
A+ VDA+ + + E
Sbjct: 309 --ASYNIMVDAYGRAGLHE 325
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 178/376 (47%), Gaps = 30/376 (7%)
Query: 66 CLDLIAKLRG----LQKAESYIQKIPES--FRGEVVYRTLL-ANCVAGNNVKKAEEVFNR 118
C +L+ G +KAES ++ E+ E Y LL A C +G ++KAE VF
Sbjct: 208 CYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGL-LEKAEAVFAE 266
Query: 119 MKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ GFP ++ N + L K D +K ++ M+++ + + +Y +LI++ G+++
Sbjct: 267 MRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASK 326
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+V M+S+ +P+ T L + G EKAE + ++++ L+ +
Sbjct: 327 SYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNA 386
Query: 238 LLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
L+ Y+ G A I+ L CE + M ++A+G+ E+A+AVF+ M +
Sbjct: 387 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIM--VDAYGRAGLHEDAQAVFEVMKR 444
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ K + LL Y+ ++K +++V QM +SG ++++ L+ G+ EK
Sbjct: 445 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 504
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-------------RQV 399
+ + L A ++ + S+Y ++++ Y + G E++F + ++
Sbjct: 505 MEEV-LTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRI 563
Query: 400 GYVARFKQFQTLVQAY 415
G +R KQ+ ++ +
Sbjct: 564 GAYSRRKQYNRCLEVF 579
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 120/269 (44%), Gaps = 13/269 (4%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEE+F ++++ G +A N L+ Y R A++ LM+
Sbjct: 350 TALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQH 409
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY I++D G++ V E MK GI P + +L Y G+ K
Sbjct: 410 MGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAK 469
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG 275
E ++ +M +K + +L LY LG+ +++ + E P+ A I +
Sbjct: 470 CEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPY----PADISTYN 525
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKH-------YTALLKVYADHKMLSKGKDLVKQMAES 328
L + F RM + ++ L ++ +T+ + Y+ K ++ ++ ++M ++
Sbjct: 526 ILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDA 585
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSIL 357
GC+ L+ G ++++ +++
Sbjct: 586 GCYPDGGTAKVLLSACSNGDQIQEVTTVI 614
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 7/285 (2%)
Query: 140 RLDKKKVADVLL---LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD 196
RL+K+ A VL+ ++ + + Y +LID GQ + + + P
Sbjct: 181 RLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPT 240
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW- 255
T A+L K Y + G EKAEA+ EM + + G + I+
Sbjct: 241 EDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFE 300
Query: 256 --KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
K P I +GK +K A VF M K + +TAL+ +A
Sbjct: 301 RMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREG 360
Query: 314 MLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSY 373
+ K +++ +Q+ E+G A++AL++ + G A I Q +P +SY
Sbjct: 361 LCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIF-SLMQHMGCEPDRASY 419
Query: 374 MLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+++D Y + G + +F M+++G K L+ AY A
Sbjct: 420 NIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 464
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 7/199 (3%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P D ++A+ +E+AEAVF M K S Y A + K ++
Sbjct: 239 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 298
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
++M C + L+ L+ + + A + + + Q K KP ++ +++ +A
Sbjct: 299 FERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQ-KCKPNICTFTALVNAFA 357
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG---IRDRMRADNVFPNK 438
+ G E+IF ++++ G + L++AY A P YG I M+ P++
Sbjct: 358 REGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFP-YGAAEIFSLMQHMGCEPDR 416
Query: 439 ALAAQVAQVDAFRKTAVSE 457
A+ VDA+ + + E
Sbjct: 417 --ASYNIMVDAYGRAGLHE 433
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 160/361 (44%), Gaps = 10/361 (2%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKKKVADVLLLMEKENVKLT 161
C +G V A ++ + M G V + N LL Y R D +VA++L +ME E ++ T
Sbjct: 154 CKSGR-VAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT 212
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+Y IL+D + D+T ++ V E MKS+ + D + + Y G +A +
Sbjct: 213 VGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFD 272
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
E G+ ++ + T L+ + ++G+ A+ + ++ V I+ + + N
Sbjct: 273 ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKN 332
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
V++A + M K +L Y L + + K+L++ M E G +++
Sbjct: 333 MVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYT 392
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L+ +H G++ +A L + N +P +Y ++MD Y K+G I E+ + M +
Sbjct: 393 TLISIHCNEGDMVEARR-LFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEK 451
Query: 399 VGYVARFKQFQTLVQAY-INAKTP-AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVS 456
G V + LV + +N K A + + M+ PN L A A + K S
Sbjct: 452 KGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPN--LVAYTALISGLAKEGRS 509
Query: 457 E 457
E
Sbjct: 510 E 510
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 130/298 (43%), Gaps = 8/298 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y +D ++ R + K E+ +++ ++ G+V + + + N C AGN V++A EVF+
Sbjct: 216 YTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN-VRRASEVFDEC 274
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
G L+ + ++ + + A++L+ M+ V + Q + +ID + N +
Sbjct: 275 VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMV 334
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
++ M+ GIE D T LA R ++A+ +L+ M ++ + + L
Sbjct: 335 DKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTL 394
Query: 239 LPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ ++ G + R+++ N P L ++ + K + EAE M K
Sbjct: 395 ISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGL 454
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
Y AL+ + + + L ++M + G +A+ AL+ + G E+A
Sbjct: 455 VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEA 512
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 107/293 (36%), Gaps = 40/293 (13%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEV 115
E Y + ++ K+ ++ AE + + RG ++V+ T++ N V KA E+
Sbjct: 283 EHTYGALINGFCKIGQMEAAEMLVTDM--QVRGVGINQIVFNTMIDGYCRKNMVDKALEI 340
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQ 174
M+ G + + N L +R ++ A LL +M ++ V+ SY LI I
Sbjct: 341 KMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCN 400
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
D+ ++ M G EP T ++ Y+ G +AE EME L ++
Sbjct: 401 EGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYS 460
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + GK D R+ F+ M +
Sbjct: 461 YAALVHGHCVNGKVDVALRL--------------------------------FEEMKQRG 488
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV-KLHVE 346
K + YTAL+ A + L M G + ALV LH +
Sbjct: 489 SKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTD 541
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 178/376 (47%), Gaps = 30/376 (7%)
Query: 66 CLDLIAKLRG----LQKAESYIQKIPES--FRGEVVYRTLL-ANCVAGNNVKKAEEVFNR 118
C +L+ G +KAES ++ E+ E Y LL A C +G ++KAE VF
Sbjct: 170 CYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGL-LEKAEAVFAE 228
Query: 119 MKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ GFP ++ N + L K D +K ++ M+++ + + +Y +LI++ G+++
Sbjct: 229 MRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGKASK 288
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+V M+S+ +P+ T L + G EKAE + ++++ L+ +
Sbjct: 289 SYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNA 348
Query: 238 LLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
L+ Y+ G A I+ L CE + M ++A+G+ E+A+AVF+ M +
Sbjct: 349 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIM--VDAYGRAGLHEDAQAVFEVMKR 406
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ K + LL Y+ ++K +++V QM +SG ++++ L+ G+ EK
Sbjct: 407 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 466
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-------------RQV 399
+ + L A ++ + S+Y ++++ Y + G E++F + ++
Sbjct: 467 MEEV-LTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRI 525
Query: 400 GYVARFKQFQTLVQAY 415
G +R KQ+ ++ +
Sbjct: 526 GAYSRRKQYNRCLEVF 541
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 120/269 (44%), Gaps = 13/269 (4%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEE+F ++++ G +A N L+ Y R A++ LM+
Sbjct: 312 TALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQH 371
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY I++D G++ V E MK GI P + +L Y G+ K
Sbjct: 372 MGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAK 431
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG 275
E ++ +M +K + +L LY LG+ +++ + E P+ A I +
Sbjct: 432 CEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPY----PADISTYN 487
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKH-------YTALLKVYADHKMLSKGKDLVKQMAES 328
L + F RM + ++ L ++ +T+ + Y+ K ++ ++ ++M ++
Sbjct: 488 ILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDA 547
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSIL 357
GC+ L+ G ++++ +++
Sbjct: 548 GCYPDGGTAKVLLSACSNGDQIQEVTTVI 576
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 7/285 (2%)
Query: 140 RLDKKKVADVLL---LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD 196
RL+K+ A VL+ ++ + + Y +LID GQ + + + P
Sbjct: 143 RLNKQWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPT 202
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW- 255
T A+L K Y + G EKAEA+ EM + + G + I+
Sbjct: 203 EDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFE 262
Query: 256 --KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
K P I +GK +K A VF M K + +TAL+ +A
Sbjct: 263 RMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREG 322
Query: 314 MLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSY 373
+ K +++ +Q+ E+G A++AL++ + G A I Q +P +SY
Sbjct: 323 LCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIF-SLMQHMGCEPDRASY 381
Query: 374 MLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+++D Y + G + +F M+++G K L+ AY A
Sbjct: 382 NIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRA 426
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 7/199 (3%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P D ++A+ +E+AEAVF M K S Y A + K ++
Sbjct: 201 PTEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEI 260
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
++M C + L+ L+ + + A + + + Q K KP ++ +++ +A
Sbjct: 261 FERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQ-KCKPNICTFTALVNAFA 319
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG---IRDRMRADNVFPNK 438
+ G E+IF ++++ G + L++AY A P YG I M+ P++
Sbjct: 320 REGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFP-YGAAEIFSLMQHMGCEPDR 378
Query: 439 ALAAQVAQVDAFRKTAVSE 457
A+ VDA+ + + E
Sbjct: 379 --ASYNIMVDAYGRAGLHE 395
>gi|302804432|ref|XP_002983968.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
gi|300148320|gb|EFJ14980.1| hypothetical protein SELMODRAFT_423071 [Selaginella moellendorffii]
Length = 598
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 205/465 (44%), Gaps = 28/465 (6%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
D P + S + + G S+ + + L R+ Y AL +K + +R
Sbjct: 79 DVPGHRVASYINWLVDMGEIDSKPMVLSIIRKLTKRQKYKTAL--------DKAFEIDDR 130
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
DY +D A + + AE ++P+ + E Y +LA V ++KA V +++++
Sbjct: 131 DYVLQVDYYAHV-DMYLAEMAFNRLPDDKKTEEAYNYILAGYVRNRMLEKAVVVMDKIRE 189
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKIL---IDIKGQSNDL 178
G V++F+ Q+ +L+ L ++ L++ E ++ L F L + IK + DL
Sbjct: 190 LGL-VSAFSLEQMTLLFHYLGLERRIPALVV-EARSLGL-HFHPHFLNTHLWIKRRHGDL 246
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE----MEGDNLKEHRWT 234
+GM+++VE ++ G ++ T +A Y+ G EKA A L + K+ R
Sbjct: 247 SGMEEIVEELELMG-RSNAWTYIFIASAYIQAGFPEKAHAALGAAEAGIRNGRFKKQRKV 305
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSK 292
+L LY L + + R+W + S P + V + IEA G + AE +F+ + K
Sbjct: 306 YNKILLLYGLLKDMEGIERVWGILNSRPLVAVHNHLFMIEALGSAGNIGRAEEIFEELRK 365
Query: 293 TWK-KLSTKHYTALLKVYADHKMLSKGKD-LVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
+ + + + Y + ++ K + L A+ P + +K +++ E
Sbjct: 366 CRGVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELYHYFIKGYIKRNEK 425
Query: 351 EKADSILLKAQQQNKFKPM---FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+ A + Q +++ + + + +M YA+RGD+ S +F + + +
Sbjct: 426 DWAIEAYEEGQSLVRYRSTKLWYETMLEVMSIYAERGDVTSALAMFKHCKACKH-RDIRM 484
Query: 408 FQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRK 452
F L + Y+ AK PA+G+ RM PN + + Q+ RK
Sbjct: 485 FTLLFKTYVVAKEPAHGLIKRMVMLGFEPNDEIRELILQLKPIRK 529
>gi|302798915|ref|XP_002981217.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
gi|300151271|gb|EFJ17918.1| hypothetical protein SELMODRAFT_420704 [Selaginella moellendorffii]
Length = 541
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 97/454 (21%), Positives = 198/454 (43%), Gaps = 49/454 (10%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
I + L + EGN ++R I + L R Y + ++L W+ K + D+ +
Sbjct: 125 IVAALKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLVRM 184
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
D + + K + +I + + E Y LL + ++A +V +MK+
Sbjct: 185 DFHTRELKVDKVLTCFNRIQD--KTETCYVLLLQAFATAHRKERALDVLKQMKELVLITN 242
Query: 128 SFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
S++ N ++ +Y R+ A + L +K NV F+Y L+ +S D GMD +
Sbjct: 243 SYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTYLNLL----KSRDALGMDDLE 298
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ ++ ++ D W R L+ LY +
Sbjct: 299 DTIEEFFLDVDKIPTGF-----------------------------EW--RNLIRLYGAM 327
Query: 246 GKADQVARIWK----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
GK V R+W+ + E P +AAIE++G ++++ E + K++ +KLS +
Sbjct: 328 GKKKDVERLWREQKRVAEYMPE-SYFLAAIESFGMNGEMKQFEEICKQLEAQNQKLSERQ 386
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+LKVY + +++ + K+M E +G + LV +V + KA +A+
Sbjct: 387 CFTMLKVYCMNGLMNDAERTAKKMEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFSEAE 446
Query: 362 QQNKFK----PMFSSYMLIMDQYAKRGDIHSTEKIFHR-MRQVGYVARFKQFQTLVQAYI 416
++ K P+F + + +++ YA + ++ E++ + ++ Y + F L++ Y
Sbjct: 447 EKGLAKGFKNPLFVTVLTLLEAYAGKKELEKAEEMVEKVLKTKHYPYDIRLFNALLKVYR 506
Query: 417 NAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAF 450
+ PA+GI +R++ + PN+ + +++ F
Sbjct: 507 RCQKPAWGIENRIKEAKLEPNETTHKLLKKLEVF 540
>gi|449438238|ref|XP_004136896.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
gi|449478839|ref|XP_004155431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Cucumis sativus]
Length = 406
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 171/372 (45%), Gaps = 50/372 (13%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S L ++ EGN ++ AE+ LR + Y AL++ EW+ ++ + + + D+
Sbjct: 68 PKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSHNQSELSDSDF 127
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A +DL+ K+ G+ AE Y + +P + Y LL + KAE ++ +MK+
Sbjct: 128 AIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKMKESD 187
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
P+T+ N+++ LY + + +KV+ ++ +++ V F+Y + I + ++ G+
Sbjct: 188 IPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVK 247
Query: 183 QVVEAMKSEGIEPDSSTQAI----LAKHYVSGGR--KEKAEAMLKEMEGDNLKEHRW-TC 235
Q++ M P+S+ + L YV ++ ++++ + G + + W T
Sbjct: 248 QILNEMNH---NPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSG--ISQREWITY 302
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
LL+ LYA LG D++ +IW+ RM+K +
Sbjct: 303 DLLIILYAGLGNKDKIDQIWRSL------------------------------RMTK--Q 330
Query: 296 KLSTKHYTALLKVYA---DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
K+++++Y ++ Y D K + + D KQ + I + + LV +E G EK
Sbjct: 331 KMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTTTDFDIS--SCNRLVNAFIEAGLHEK 388
Query: 353 ADSILLKAQQQN 364
A+S + Q+N
Sbjct: 389 ANSFVNVLIQKN 400
>gi|302753488|ref|XP_002960168.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
gi|300171107|gb|EFJ37707.1| hypothetical protein SELMODRAFT_402234 [Selaginella moellendorffii]
Length = 585
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 101/463 (21%), Positives = 202/463 (43%), Gaps = 24/463 (5%)
Query: 2 DAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
D P + S + + G S+ + + L R+ Y AL +K + +R
Sbjct: 66 DVPGHRVSSYINWLVDMGEIDSKPMVLSIIRKLTKRQKYKTAL--------DKAFEIDDR 117
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
DY +D A + + AE ++P+ + E Y +LA V ++KA V +++++
Sbjct: 118 DYVLQVDYYAHV-DMYLAEMAFNRLPDDKKTEEAYNYILAGFVRNRMLEKAVVVMDKIRE 176
Query: 122 KGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G V++F+ Q+ +L+ L ++++ +++ + + IK + DL+G
Sbjct: 177 LGL-VSAFSLEQMTLLFHYLGLERRIPALVVEARSLGLHFHPHFLNTHLWIKRRHGDLSG 235
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE----MEGDNLKEHRWTCR 236
M+++VE ++ G ++ T +A Y+ G EKA A L + K+ R
Sbjct: 236 MEEIVEELELMG-RSNAWTYIFIASAYIQAGLPEKAHAALGAAEAGIRNGRFKKQRKVYN 294
Query: 237 LLLPLYAELGKADQVARIWKLCESNPWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+L LY L + + R+W + S P + V + IEA G + AE +F+ + K
Sbjct: 295 KILLLYGLLKDTEGIERVWGILNSRPLVAVHNHLFMIEALGSAGNIGRAEEIFEELRKCR 354
Query: 295 K-KLSTKHYTALLKVYADHKMLSKGKD-LVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ + + + Y + ++ K + L A+ P + +K +++ E +
Sbjct: 355 GVRKEYRQFIVMAGAYTKNGLMDKATEVLYDYPAKYKARPVPELYHYFIKGYIKRNEKDW 414
Query: 353 ADSILLKAQQQNKFKPM---FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
A + Q +++ + + + +M YA+RGD+ S +F + + + F
Sbjct: 415 AIEAYEEGQSLVRYRSTKLWYETMLEVMSIYAERGDVTSALAMFKHCKACKH-RDIRMFT 473
Query: 410 TLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRK 452
L + Y+ AK PA+G+ RM PN + + ++ RK
Sbjct: 474 LLFKTYVVAKEPAHGLIKRMVMLGFEPNDEIRELILELKPIRK 516
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 159/361 (44%), Gaps = 10/361 (2%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKKKVADVLLLMEKENVKLT 161
C +G V A ++ + M G V + N LL Y R D +VA++L +ME E ++ T
Sbjct: 154 CKSGR-VAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT 212
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+Y IL+D + D+T ++ V E MKS+ + D + + Y G +A +
Sbjct: 213 VGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFD 272
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
E G+ ++ + T L+ + ++G+ A+ + ++ V I+ + + N
Sbjct: 273 ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKN 332
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
V++A + M K +L Y L + + K+L++ M E G +++
Sbjct: 333 MVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYT 392
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L+ +H G++ +A L + N +P +Y ++MD Y K+G I E+ M +
Sbjct: 393 TLISIHCNEGDMVEARR-LFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEK 451
Query: 399 VGYVARFKQFQTLVQAY-INAKTP-AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVS 456
G V + LV + +N K A + + M+ PN L A A + K S
Sbjct: 452 KGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPN--LVAYTALISGLAKEGRS 509
Query: 457 E 457
E
Sbjct: 510 E 510
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 131/298 (43%), Gaps = 8/298 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y +D ++ R + K E+ +++ ++ G+V + + + N C AGN V++A EVF+
Sbjct: 216 YTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN-VRRASEVFDEC 274
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDL 178
G L+ + ++ + + A++L+ M+ V + Q + +ID + N +
Sbjct: 275 VGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMV 334
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
++ M+ GIE D T LA R ++A+ +L+ M ++ + + L
Sbjct: 335 DKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTL 394
Query: 239 LPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ ++ G + R+++ N P L ++ + K + EAE K M K
Sbjct: 395 ISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGL 454
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
Y AL+ + + + L ++M + G +A+ AL+ + G E+A
Sbjct: 455 VPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEA 512
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 108/293 (36%), Gaps = 40/293 (13%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEV 115
E Y + ++ K+ ++ AE + + RG ++V+ T++ N V KA E+
Sbjct: 283 EHTYGALINGFCKIGQMEAAEMLVTDM--QVRGVGINQIVFNTMIDGYCRKNMVDKALEI 340
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQ 174
M+ G + + N L +R ++ A LL +M ++ V+ SY LI I
Sbjct: 341 KMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCN 400
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
D+ ++ M G EP T ++ Y+ G +AE KEME L ++
Sbjct: 401 EGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYS 460
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + GK D R+ F+ M +
Sbjct: 461 YAALVHGHCVNGKVDVALRL--------------------------------FEEMKQRG 488
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV-KLHVE 346
K + YTAL+ A + L M G + ALV LH +
Sbjct: 489 SKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTD 541
>gi|226528511|ref|NP_001143788.1| uncharacterized protein LOC100276555 [Zea mays]
gi|195627038|gb|ACG35349.1| hypothetical protein [Zea mays]
Length = 422
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 22/264 (8%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S + L K++ EG D AE+ +L R Y AL++++W++T+ + D E DY
Sbjct: 69 SATAALEKWSSEGRDAPAAELRRIARDLTRVRRYKHALEVADWMKTHHESDLSENDYGMR 128
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+DLI K+ G AE + +K+P + Y LL + +AE +F RMK P+
Sbjct: 129 IDLITKVFGASAAEDFFEKLPAGAKSLEAYTALLHSYGRSKMTDRAERLFERMKGASLPM 188
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N+++ LY + + KV V ++++NV F+Y + S DL G V+
Sbjct: 189 DALVYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLFTYNLRASAAAASMDLEGFRAVL 248
Query: 186 EAMKSEGIEPDSSTQAI---LAKHYVSGGR---------KEKAEAMLKEMEGDNLKEHRW 233
+ M + A+ LA YV G+ E EA + + E W
Sbjct: 249 DEMSRDLKSSTEGGWALYRDLASVYVDAGQLLGSVNSPPVEAGEARISQRE--------W 300
Query: 234 -TCRLLLPLYAELGKADQVARIWK 256
T L+ L+A LG+ +++ IW+
Sbjct: 301 ITYDFLVILHAGLGRPERIRDIWR 324
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
K+ AE F+++ K L + YTALL Y KM + + L ++M + + L
Sbjct: 134 KVFGASAAEDFFEKLPAGAKSL--EAYTALLHSYGRSKMTDRAERLFERMKGASLPMDAL 191
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
++ ++ L++ GE+ K +++ + ++QN +F +Y L A D+ +
Sbjct: 192 VYNEMMTLYISVGELGKVEAVAEELKRQNVSPDLF-TYNLRASAAAASMDLEGFRAVLDE 250
Query: 396 M 396
M
Sbjct: 251 M 251
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 165/356 (46%), Gaps = 10/356 (2%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKE-NVKLTQFSY 165
N++ A E F +M++ G T+ N L+ Y K + + LL LM +E NVK +Y
Sbjct: 98 NMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTY 157
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+L+ +T VV M + GI+PD T +A Y G ++AE ++ EM+
Sbjct: 158 NVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQN 217
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCE--SNPWLDVCMAAIEAWGKLNKVEE 282
+ ++ + TC +++ Y + G+ + R +++ E +P L + + I+ + + +
Sbjct: 218 NGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDG 277
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
+ V M + K ++ ++ ++ + K +++ M ++G A+ L K
Sbjct: 278 VDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAK 337
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+V E EKA+ LL ++ F+P + ++ + G + ++F +M Q G
Sbjct: 338 GYVRAQEPEKAEE-LLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGIS 396
Query: 403 ARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVS 456
K F+TL+ + A+ P A I M V P K+ VA +A+R T ++
Sbjct: 397 PNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVA--EAWRATGMT 450
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K +EAE++F + + K S YT LL K ++ Q+ E+G + + ++
Sbjct: 28 KPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFN 87
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A++ E G +E A K Q+N KP S+Y ++ Y G + K+ M Q
Sbjct: 88 AVINAFSESGNMESAMETFWK-MQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQ 146
Query: 399 VGYV-ARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
G V + + LV+A+ N K T A+ + +M A + P+
Sbjct: 147 EGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPD 188
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 110/278 (39%), Gaps = 41/278 (14%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K + SY L+ + ++ ++ G+ PDS + + G E A
Sbjct: 45 KPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAME 104
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
+M+ + +K T L I+ +G
Sbjct: 105 TFWKMQENGMKPTTSTYNTL--------------------------------IKGYGIAG 132
Query: 279 KVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
K EE+ + + MS+ K + + Y L++ + + K +++ ++V +M SG + +
Sbjct: 133 KPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTY 192
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ + + + G +++A+ ++L+ Q N +P + +IM Y K G I + +RM+
Sbjct: 193 NTIATAYAQKGALDQAEGVILE-MQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMK 251
Query: 398 QVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVF 435
++G F +L++ ++ I DR D V
Sbjct: 252 ELGIHPNLVIFNSLIKGFV-------AIMDRDGVDEVL 282
>gi|297803972|ref|XP_002869870.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
gi|297315706|gb|EFH46129.1| hypothetical protein ARALYDRAFT_354609 [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 173/367 (47%), Gaps = 15/367 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P ISI L ++ EGN S+ E+ + L + + AL++S W+ D+
Sbjct: 48 PKISIVPVLDEWRGEGNYTSKEELRGMIKELIKYKRFVHALEVSRWMSDRMFFPLSLTDF 107
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
+ ++LI+++ GL +AE + + IP+ +G V+ +LL+ + +KA ++ MK+ G
Sbjct: 108 GTRINLISRVCGLGEAEVFFENIPKDMKGIAVFSSLLSCYAREKSAEKAAKLVEAMKEAG 167
Query: 124 FPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ + N ++ +Y +++ K+ D++L ME+ V QF+ I + ++++ G++
Sbjct: 168 VSMDTRCYNLMMNMYYQMNVHGKLDDLMLEMEQNGVSFDQFTLSIRLSAYAAASNIEGIE 227
Query: 183 QVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEME----GDNLKEHRWTCRL 237
+ +E + S D + + A ++ ++A MLK+ E D+ E T
Sbjct: 228 KTIEKISSMSETAIDWTIYSAAANAFLKVELIDEATMMLKKCEEFVNEDSGNEAFHT--- 284
Query: 238 LLPLYAELGKADQVARIW-KLCESNPWLDVCM-AAIEAWGKLNKVEEAEAVFKRMSKTWK 295
LL LY E G+ + ++R+W + E + I + K +E E VF +
Sbjct: 285 LLKLYGETGRKEDLSRVWLRFKEERKVFNSGYKIMISSALKFGDIELVEKVFNQWESEKL 344
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL--AWDALVKLHVEGGEVEKA 353
+ L+ Y + + K + L+K+ G + P A+ L +++EG E+ KA
Sbjct: 345 SYDFRIPNLLINFYCEKDLTEKAELLLKKA--EGNRVSPPMDAYICLANIYLEGDEISKA 402
Query: 354 DSILLKA 360
+ +A
Sbjct: 403 TEAIERA 409
>gi|356565780|ref|XP_003551115.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 622
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 157/350 (44%), Gaps = 8/350 (2%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKE-NVKLTQFSY 165
N++ A++V +MK+ G ++ N L+ Y K + LL LM E NVK +
Sbjct: 215 NIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESIKLLDLMSIEGNVKPNLKTC 274
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+LI + + VV M + G++PD + +A Y G+ + EAM+ EM
Sbjct: 275 NMLIRALCKMEHTSEAWNVVYKMTTSGMQPDVVSFNTVAISYAQNGKTVQVEAMILEMRR 334
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVAR-IWKLCESN--PWLDVCMAAIEAWGKLNKVEE 282
+ LK + TC +++ Y GK + R ++++ + P L + + + + +
Sbjct: 335 NGLKPNDRTCTIIISGYCREGKVREALRFVYRIKDLGLQPNLIILNSLVNGFVDTMDRDG 394
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
V M + + + Y+ ++ ++ L K K++ M +SG A+ L K
Sbjct: 395 VNEVLNLMEEFYIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDGHAYSILAK 454
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+V E+EKA+ LL ++ +P + +M + G + + ++F +M + G
Sbjct: 455 GYVRAQEMEKAEE-LLTVMTKSGVQPNVVIFTTVMSGWCSVGRMDNAMRVFDKMGEFGVS 513
Query: 403 ARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAF 450
K F+TL+ Y AK P A G+ M +V P K+ VA+ F
Sbjct: 514 PNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWCF 563
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 6/315 (1%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKI 167
++K E+F+ M +G + F+ L+ Y R + + + ++L M++E V +Y
Sbjct: 164 LEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNT 223
Query: 168 LIDIKGQSN-DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+I+ + + D G+ + M+ EG++PD T L + G ++AE + K M
Sbjct: 224 VINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEG 283
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM--AAIEAWGKLNKVEEA 283
+ T ++ + +LGK ++VA + K ES +L D+ IEA KL ++EA
Sbjct: 284 GIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEA 343
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
VFK+M + Y+ LL +Y H ++L QM ES ++ L+++
Sbjct: 344 MDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRV 403
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
EGG ++ ++ +N P +Y ++ K G +KI M G V
Sbjct: 404 FGEGGYFKEVVTLFHDLVDEN-IDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVP 462
Query: 404 RFKQFQTLVQAYINA 418
K + L++AY A
Sbjct: 463 SSKAYSGLIEAYGQA 477
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TLL+ C A +AE VF M + G + ++ + +L K +KVA +L
Sbjct: 255 VTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKE 314
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME E SY +LI+ + + V + M++ G P++ST +IL Y GR
Sbjct: 315 MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGR 374
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN---------- 261
+ + +M+ + + T +L+ ++ E G +V ++ L + N
Sbjct: 375 YDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEG 434
Query: 262 ---------------------------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
P IEA+G+ +EA F M++
Sbjct: 435 LVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVG 494
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K + Y +L+ +A + + + ++ +M E G ++ +++ + + G+ E+A
Sbjct: 495 SKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEA 553
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 286 VFKRMSK-TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+FK M + W K + YT ++ + +L K ++ +MA G ++ AL+ +
Sbjct: 134 LFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAY 193
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI--HSTEKIFHRMRQVGYV 402
G+ E + LL+ ++ + P +Y +++ A RGD+ +F MR G
Sbjct: 194 GRNGQYETSLE-LLERMKRERVSPNILTYNTVINACA-RGDLDWEGLLGLFAEMRHEGVQ 251
Query: 403 ARFKQFQTLVQA 414
+ TL+ A
Sbjct: 252 PDLVTYNTLLSA 263
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 6/315 (1%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKI 167
++K E+F+ M +G + F+ L+ Y R + + + ++L M++E V +Y
Sbjct: 164 LEKCSEIFDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNT 223
Query: 168 LIDIKGQSN-DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+I+ + + D G+ + M+ EG++PD T L + G ++AE + K M
Sbjct: 224 VINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEG 283
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM--AAIEAWGKLNKVEEA 283
+ T ++ + +LGK ++VA + K ES +L D+ IEA KL ++EA
Sbjct: 284 GIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEA 343
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
VFK+M + Y+ LL +Y H ++L QM ES ++ L+++
Sbjct: 344 MDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRV 403
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
EGG ++ ++ +N P +Y ++ K G +KI M G V
Sbjct: 404 FGEGGYFKEVVTLFHDLVDEN-IDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVP 462
Query: 404 RFKQFQTLVQAYINA 418
K + L++AY A
Sbjct: 463 SSKAYSGLIEAYGQA 477
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TLL+ C A +AE VF M + G + ++ + +L K +KVA +L
Sbjct: 255 VTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKE 314
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME E SY +LI+ + + V + M++ G P++ST +IL Y GR
Sbjct: 315 MESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGR 374
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN---------- 261
+ + +M+ + + T +L+ ++ E G +V ++ L + N
Sbjct: 375 YDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEG 434
Query: 262 ---------------------------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
P IEA+G+ +EA F M++
Sbjct: 435 LVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVG 494
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K + Y +L+ +A + + + ++ +M E G ++ +++ + + G+ E+A
Sbjct: 495 SKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEA 553
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 286 VFKRMSK-TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+FK M + W K + YT ++ + +L K ++ +MA G ++ AL+ +
Sbjct: 134 LFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAY 193
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI--HSTEKIFHRMRQVGYV 402
G+ E + LL+ ++ + P +Y +++ A RGD+ +F MR G
Sbjct: 194 GRNGQYETSLE-LLERMKRERVSPNILTYNTVINACA-RGDLDWEGLLGLFAEMRHEGVQ 251
Query: 403 ARFKQFQTLVQA 414
+ TL+ A
Sbjct: 252 PDLVTYNTLLSA 263
>gi|302801862|ref|XP_002982687.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
gi|300149786|gb|EFJ16440.1| hypothetical protein SELMODRAFT_422000 [Selaginella moellendorffii]
Length = 541
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 197/454 (43%), Gaps = 49/454 (10%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
I + L + EGN ++R I + L R Y + ++L W+ K + D+ +
Sbjct: 125 IVAALKDWQSEGNLVTRDVIYKLIIRLHARMFYFQGMKLMNWVIVEKPFQLTDFDHLVRM 184
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
D + + K + +I + + E Y LL + ++A +V +MK+
Sbjct: 185 DFHTRELKVDKVLTCFNRIQD--KTETCYVLLLQAFATAHRKERALDVLKQMKELVLITN 242
Query: 128 SFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
++ N ++ +Y R+ A + L +K NV F+Y L+ +S D GMD +
Sbjct: 243 PYSYNLVIAMYLRMGLIDEAKEMFAELKDKSNVAPDAFTYLNLL----KSRDALGMDDLE 298
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ ++ ++ D W R L+ LY +
Sbjct: 299 DTIEEFFLDVDKIPTGF-----------------------------EW--RNLIRLYGAM 327
Query: 246 GKADQVARIWK----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
GK V R+W+ + E P +AAIE++G ++++ E + K++ +KLS +
Sbjct: 328 GKKKDVERLWREQKRVAEYMPE-SYFLAAIESFGMNGEMKQFEEICKQLEAQNQKLSERQ 386
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+LKVY + +++ + K+M E +G + LV +V + KA +A+
Sbjct: 387 CFTMLKVYCMNGLMNDAERTAKKMEELRYKLGFKGYHYLVSGYVNRHQFVKATEKFSEAE 446
Query: 362 QQNKFK----PMFSSYMLIMDQYAKRGDIHSTEKIFHR-MRQVGYVARFKQFQTLVQAYI 416
++ K P+F + + +++ YA + ++ E++ + ++ Y + F L++ Y
Sbjct: 447 EKGLAKGFKNPLFVTVLTLLEAYAGKKELEKAEEMVEKVLKTKHYPYDIRLFNALLKVYR 506
Query: 417 NAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAF 450
+ PA+GI +R++ + PN+ + +++ F
Sbjct: 507 RCQKPAWGIENRIKEAKLEPNETTHKLLKKLEVF 540
>gi|356518447|ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Glycine max]
Length = 496
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 190/433 (43%), Gaps = 11/433 (2%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
L + ++GND+S ++ L + Y AL++ EW++ K I D+A L+LI
Sbjct: 50 LQNWVDQGNDVSPFQLRSIARTLVKSKRYHHALEVFEWIKNQKNFHMIPADHAMKLELII 109
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
+ GL +AE Y +P+S + LL V + KAE ++ + G V+
Sbjct: 110 ENHGLMEAEEYFMNLPDSAAKKAACLILLRGYVRDRDTSKAETFMLKLYELGLVVSPHPF 169
Query: 132 NQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND--LTGMDQVVEAM 188
N+++ LY + +KV V+ M++ + SY + ++ + + ++ V M
Sbjct: 170 NEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNVLSYNLWMNACSEEEGYVVAAVETVFRQM 229
Query: 189 KSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
++ +E + A LA Y G+ +KA +LK+ E +R L+ LYA L
Sbjct: 230 LNDRNVEVGWGSLATLANAYKKAGQSKKAILVLKDAEKKLSTCNRLGHFFLITLYASLKD 289
Query: 248 ADQVARIWKLCESNPWLDVC---MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
+ V R+W+ ++ C + + KL + +A+ +F +K +
Sbjct: 290 KEGVLRLWEASKAVRGRISCANYICILTCLVKLGDIVQAKRIFLEWESNCQKYDIRVSNV 349
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
LL Y + ++ + + L + G + L++ +V ++++A + +A
Sbjct: 350 LLGAYVRNGLMEEAESLHLHTLQKGGCPNYKTLEILMEGYVNWQKMDEAIITMKRALAMM 409
Query: 365 K---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
K ++P + I + K G++ +K + +G V+ ++ L++ +++A P
Sbjct: 410 KDCHWRPPHGIVLAIAEYLEKDGNLEYADKYITDIHNLGLVS-LSLYKVLLRMHLSANKP 468
Query: 422 AYGIRDRMRADNV 434
+ I M D V
Sbjct: 469 PFHILKMMDEDKV 481
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 166/358 (46%), Gaps = 11/358 (3%)
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENV 158
A C +GN VK+A ++F +M++KG T+ N L+ + + K + + LL + +EN+
Sbjct: 147 AFCESGN-VKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSREENI 205
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K +Y IL+ N++ VV M G++PD T +A+ Y G +A
Sbjct: 206 KPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAE 265
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKL--CESNPWLDVCMAAIEAWG 275
++ +M+ + + + TC +++ Y++ G AD + I+K+ +P L + + ++ +
Sbjct: 266 LISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFL 325
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
+ + + M + K Y+ ++ ++ ++ K +++ + M +SG
Sbjct: 326 DITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNH 385
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
A+ L K +V GE +KA++ LL+A + P + I+ + + +++ R
Sbjct: 386 AFSILAKGYVRAGEPKKAEA-LLEAMATHGAHPNVVMFTTIISGWCSAAKMEDALRVYDR 444
Query: 396 MRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFR 451
M ++ F+TL+ Y A P A + M V P K VA DA+R
Sbjct: 445 MCRMDVQPNLNTFETLIWGYGEANEPWKAEELLQIMEEMGVLPRKNTVQLVA--DAWR 500
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 91/220 (41%), Gaps = 7/220 (3%)
Query: 238 LLPLYAELGKADQVARIWK-LCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ E GK +V I K L E P L + A + + + K++ +
Sbjct: 74 LMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNG 133
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ + + ++ + + + + + ++M E GC ++AL+K G+ E++
Sbjct: 134 LRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFGIIGKPEESS 193
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+L ++ KP +Y +++ + + +I + HRM G + T+ +A
Sbjct: 194 KLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARA 253
Query: 415 YINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAFRK 452
Y K + A + +M+ + V PN V VD + K
Sbjct: 254 YARGKETSRAAELISQMQNNKVAPNVRTCGIV--VDGYSK 291
>gi|356525847|ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 395
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 131/257 (50%), Gaps = 5/257 (1%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + L K+ +GN ++ +++ LR + Y AL++SEW+ ++++ + + DY
Sbjct: 57 PKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQRYKHALEISEWMVSHEEYELSDSDY 116
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A+ +DL K+ G+ AE Y + +P + + Y LL + KKAEE++ R+KD
Sbjct: 117 AARIDLTTKVFGIDAAERYFEGLPLATKTAETYTALLHSYAGAKLTKKAEELYQRIKDSN 176
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ N+++ LY + + +KV V+ ++++ V F+Y + I ++ +
Sbjct: 177 LSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQKVSPDIFTYNLWISYCAAILNIDEVR 236
Query: 183 QVVEAMKSEGIEPDSSTQAI-LAKHYVSGGRKEKAEA-MLKEMEGDNLKEHRW-TCRLLL 239
++++ M +S + + LA Y+S G + A + L E E + + +W T L+
Sbjct: 237 RILDEMSHGAGSNESWIRYLNLANIYISVGHLDNASSNTLVETE-KRITQRQWITYDFLI 295
Query: 240 PLYAELGKADQVARIWK 256
LY LG D++ +IW
Sbjct: 296 ILYGGLGSKDKLDQIWN 312
>gi|302811145|ref|XP_002987262.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
gi|300144897|gb|EFJ11577.1| hypothetical protein SELMODRAFT_426086 [Selaginella moellendorffii]
Length = 564
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/416 (19%), Positives = 188/416 (45%), Gaps = 17/416 (4%)
Query: 48 EWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGN 107
+W+ K + F + LDL ++ + + +++P+ +R E Y LL +
Sbjct: 55 DWVANEKVIPFGYHETLQRLDLCSRCHHVTRTLLLFRRLPKQWRSEDAYCILLELYYKRD 114
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD--KKKVADVLLLMEKENVKLTQFSY 165
++ AE+ + +G + S L++ + +L + + ++ ++ + L + Y
Sbjct: 115 MLEDAEKTMQEL--RGIGIKSLQPYHLMLSFYKLRGMEMRFERMVTEIKGSGLALDRSFY 172
Query: 166 KILIDIKGQ-SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
IL+ + D+ ++ V+ M+ G++ D+ +A Y+ G + K+E +L+ +E
Sbjct: 173 TILLAARDSFGGDMVAVEDVLAEMEGRGLKLDAVGCLAVAGIYLRSGLRHKSERVLQRLE 232
Query: 225 ----GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV--CMAAIEAWGKLN 278
K+ R +L ++ +LG D V RIW E + V + IEA+G++
Sbjct: 233 KSLKSGEFKDSNSIRRRMLAMFGKLGDRDAVDRIWHSIERSASTTVEDFIFGIEAFGRVG 292
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K++EAE ++ R+ + + + A L V + + + LV++M C + + +
Sbjct: 293 KMDEAEDMYMRVGCN--SCNPRLHNAFLAVLVEQGDVIRAVALVERMKGVRCLLSTVTYH 350
Query: 339 ALVKLHVEGGEVEKA----DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
L+K++++ G+V +A +S+ + +P + ++++ + GD+ ++E++
Sbjct: 351 LLIKVYLKAGDVSRATLAFESLRSAFGKLEWPRPSSETLAVMLEFFVGIGDVQASERLVK 410
Query: 395 RMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAF 450
+ + G+ F +L + Y RM + V P + + Q+ F
Sbjct: 411 KWMEDGFPLSAAVFHSLFRVYAKGGAGVDNFPGRMLSAGVEPTRETEQLLRQISTF 466
>gi|242073288|ref|XP_002446580.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
gi|241937763|gb|EES10908.1| hypothetical protein SORBIDRAFT_06g018360 [Sorghum bicolor]
Length = 415
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 10/256 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S + L K++ EG AE+ +L R Y AL++++W++T+ + D E DY
Sbjct: 76 SATAALDKWSGEGRAAPAAELRRIARDLSRVRRYKHALEVADWMKTHHESDLSESDYGMR 135
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+DLI K+ G AE + +K+P + Y LL + KAE +F RMKD +
Sbjct: 136 IDLITKVFGASAAEDFFEKLPPGAKSLEAYTALLHSYGRSKMTDKAERLFERMKDANLSM 195
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N+++ LY + + KV + ++++NV F+Y + + S DL G ++
Sbjct: 196 DALVYNEMMTLYISVGELDKVEIIAEELKRQNVSPDLFTYNLRVSAAAASMDLEGFKGIL 255
Query: 186 EAMKSEGIEPDS----STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
+ M +P+S + LA YV + + L E E + + W T L+
Sbjct: 256 DEMSK---DPNSKEGWTLYRNLASVYVDASQLVGSGNSLVEAEA-KISQREWITYDFLVI 311
Query: 241 LYAELGKADQVARIWK 256
L+A LG +++ IWK
Sbjct: 312 LHAGLGNQERIKDIWK 327
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE F+++ K L + YTALL Y KM K + L ++M ++ + L ++ ++
Sbjct: 148 AEDFFEKLPPGAKSL--EAYTALLHSYGRSKMTDKAERLFERMKDANLSMDALVYNEMMT 205
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-RQVGY 401
L++ GE++K + I + ++QN +F +Y L + A D+ + I M +
Sbjct: 206 LYISVGELDKVEIIAEELKRQNVSPDLF-TYNLRVSAAAASMDLEGFKGILDEMSKDPNS 264
Query: 402 VARFKQFQTLVQAYINA 418
+ ++ L Y++A
Sbjct: 265 KEGWTLYRNLASVYVDA 281
>gi|297851240|ref|XP_002893501.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339343|gb|EFH69760.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 667
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 134/259 (51%), Gaps = 6/259 (2%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
I L ++ ++GN ++ + + + + LR +ALQ+SEW+ K + I D+A+ L
Sbjct: 44 IIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARL 103
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNN--VKKAEEVFNRMKDKGFP 125
LI + GL++AE + + IP++ R + VY TLL N A ++ + KAE F +M++ G
Sbjct: 104 HLIENVVGLEEAEKFFESIPKNARDDSVYTTLL-NWYARSDKTLCKAEATFQKMRELGLL 162
Query: 126 VTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
N ++ LY L D++KV ++L M+ +V+ + ++ + D+T M++
Sbjct: 163 SRPSPYNAMMSLYIALNDREKVEELLREMKDNDVEADSITVNNVLKLYSAVCDVTAMEKF 222
Query: 185 VEAMKS-EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG-DNLKEHRWTCRLLLPLY 242
+ + GI+ + T +AK Y+ KA ML+ E + K + L+ LY
Sbjct: 223 LNKWEGINGIKLEWLTTLDMAKAYLRARSNGKAIKMLRLTEELADRKSLKSAYDHLMKLY 282
Query: 243 AELGKADQVARIWKLCESN 261
E G ++V RIW L + N
Sbjct: 283 GEAGNREEVLRIWNLYKMN 301
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 19 GNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQK 78
G+ + +++ + NLR + KALQ+SEW+ + D DYA+ L L + GL+K
Sbjct: 387 GDQMKPSDLKCLIKNLRDSNQFSKALQVSEWMGEKRVCDLYSEDYAARLYLTENVLGLEK 446
Query: 79 AESYIQKIPESFRGEVVYRTLLANCVAG--NNVKKAEEVFNRMKDKGFPVTSFACNQLLI 136
AE Y + IPE+ + VY LL++ N EE+ M++ S N +L
Sbjct: 447 AEKYFENIPENMKDYSVYVALLSSYAKSDKNLENMVEEILREMEENNVDPDSITVNYVLK 506
Query: 137 LY 138
+Y
Sbjct: 507 VY 508
>gi|302822814|ref|XP_002993063.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
gi|300139155|gb|EFJ05902.1| hypothetical protein SELMODRAFT_431180 [Selaginella moellendorffii]
Length = 570
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 188/416 (45%), Gaps = 16/416 (3%)
Query: 15 YAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLR 74
+ E D+++A + + L Y +++ ++ ++K + E DY + A
Sbjct: 121 FRENELDMTKAMMRGVLFKLLRNEKYKPGWKVANYMIRSEKFELGELDYMFQIAFAALAG 180
Query: 75 GLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQ 133
+ AE+ +P ++ + L+A N E +F +K + + + A NQ
Sbjct: 181 CDRAAENMFANLPRVYKRKKALLVLMAGSSPQRENRVVMERLFKELKHRSWYTEASALNQ 240
Query: 134 LLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE- 191
+++ + D +K++ D+ + V SY + + + + +G+++V + ++ +
Sbjct: 241 MMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDP 300
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME----GDNLKEHRWTCRLLLPLYAELGK 247
PD ST ILA Y+S G +KA L E+E + + T LL LY +
Sbjct: 301 NARPDESTLLILACGYISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKD 360
Query: 248 ADQVARIWKLCESNPW--LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
+ V IW + S P +D AI A+GK V +AE +F ++ L T A+
Sbjct: 361 KEGVESIWSILSSRPLKAVDSYSYAIAAFGKAEGVHKAEEIFAKVDGL---LETNQVIAM 417
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
L VYA + K ++L +++ + + L+ ++ GEV+KA + +
Sbjct: 418 LSVYAHYGYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQVFSMGCTVLR 477
Query: 366 FKPMFSSY----MLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
+ + S++ + ++D +A RG++ ++IF + + + ++ +++AY+N
Sbjct: 478 DRCICSAWERVVLDLLDHFASRGEVAVIDRIFRMNSVLKHFINMRVYRVVLKAYLN 533
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 10/355 (2%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSY 165
N+++A + F +MK+ G T+ N L+ Y + + + LL + + ENV+ +Y
Sbjct: 157 NMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTY 216
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+L+ ++ VV M + G++PD+ T +A Y G +AE ++ EM+
Sbjct: 217 NVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQN 276
Query: 226 DNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
N++ + TC +++ Y + GK A Q K P L V + I+ + +
Sbjct: 277 SNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDG 336
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
V M + K ++ ++ ++ + K +++ M ++ + L K
Sbjct: 337 VNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAK 396
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+V GE EKA+ I L A ++ F P + I++ + G + KIF +M + G
Sbjct: 397 GYVRAGEPEKAEEI-LNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIA 455
Query: 403 ARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAV 455
K F+TL+ Y A+ P + + M NV P K VA +A+R T +
Sbjct: 456 PNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVA--EAWRATGL 508
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/286 (17%), Positives = 116/286 (40%), Gaps = 38/286 (13%)
Query: 136 ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
I+ ++ ++V +L + + K + +Y L+ + ++ ++ G+EP
Sbjct: 81 IMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEP 140
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
DS + + G ++A + W
Sbjct: 141 DSIFFNAVINAFSESGNMQEA----------------------------------MKYFW 166
Query: 256 KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADH 312
K+ ES P I+ +G + EE++ + + MS+ + + + Y L++ + +
Sbjct: 167 KMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNK 226
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
+ K ++V +M SG + ++ + + + GE +A+ I+L+ Q N +P +
Sbjct: 227 XNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSN-VQPNERT 285
Query: 373 YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+I+ Y K G I + +RM+ +G F +L++ +I+A
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ +E +++ + + K S YT LL K ++ Q+ E+G + ++
Sbjct: 87 RPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFN 146
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A++ E G +++A K ++ KP S++ ++ Y G+ ++K+ M Q
Sbjct: 147 AVINAFSESGNMQEAMKYFWKMKESGS-KPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQ 205
Query: 399 VGYV-ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVA 445
V + + LV+A+ N A+ + +M A + P+ +A
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIA 255
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 178/406 (43%), Gaps = 28/406 (6%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y C+D K + A + ++ P+ +V Y +++ + +AEE+F
Sbjct: 118 YNVCIDCFGKAGNVDMACKFFHELKAQGLKPD----DVSYTSMIWVLCKAGRLGEAEELF 173
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQ 174
+M+ + ++A N +++ Y + + A LL L E+ + + S+ ++ G+
Sbjct: 174 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP-SVVSFNSILTCLGK 232
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
+ + E MK + EP+SST I+ GGR E+A +L EME +L + T
Sbjct: 233 KRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 291
Query: 235 CRLLLPLYAELGKADQVARIWKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
+++ L KA ++ +K+ ES NP + I+ GK +V+EA +F+
Sbjct: 292 VNIMVD---RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE 348
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
+M + YT+L++ + H G + K++ GC + + + G
Sbjct: 349 KMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAG 408
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
EVEK ++ + + F P SY +++ K G T IFH M+Q G+ + +
Sbjct: 409 EVEKG-RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAY 467
Query: 409 QTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQVDAFRK 452
+V + + AY I + M+ V P +A A VD K
Sbjct: 468 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPT--VATYGAIVDGLAK 511
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 111/260 (42%), Gaps = 8/260 (3%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
SY ILI ++ + AMK +G D+ + + G+ KA +L+EM
Sbjct: 431 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 490
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM--AAIEAWGKLNKV 280
+ ++ T ++ A++ + D+ +++ +S L+V + + I+ +GK+ ++
Sbjct: 491 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI 550
Query: 281 EEAEAVFKRMSKTWKKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+EA + + M K K L+ YT +LL + +++ + M E C +
Sbjct: 551 DEAYLILEEMMK--KGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 608
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L+ + KA + + Q+ P +Y ++ AK G+I +F R +
Sbjct: 609 ILINGLCRVQKYNKA-FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 667
Query: 399 VGYVARFKQFQTLVQAYINA 418
G + F L++ NA
Sbjct: 668 NGGIPDAASFNALIEGMSNA 687
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI-LLKA 360
YT L+ A+ + + +L++QM E G +G + LV+ G+V AD++ L+
Sbjct: 48 YTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV--ADALALVDE 105
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ + +P Y + +D + K G++ K FH ++ G
Sbjct: 106 VKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQG 145
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLME 154
Y L+ ++ +F+ MK +GF + + A N ++ + + K K ++L M+
Sbjct: 432 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 491
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
++ V+ T +Y ++D + + L + E KS+GIE + + L + GR +
Sbjct: 492 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 551
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLL 239
+A +L+EM L + +T LL
Sbjct: 552 EAYLILEEMMKKGLTPNVYTWNSLL 576
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 10/355 (2%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSY 165
N+++A + F +MK+ G T+ N L+ Y + + + LL + + ENV+ +Y
Sbjct: 157 NMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTY 216
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+L+ ++ VV M + G++PD+ T +A Y G +AE ++ EM+
Sbjct: 217 NVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQN 276
Query: 226 DNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
N++ + TC +++ Y + GK A Q K P L V + I+ + +
Sbjct: 277 SNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDG 336
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
V M + K ++ ++ ++ + K +++ M ++ + L K
Sbjct: 337 VNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAK 396
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+V GE EKA+ I L A ++ F P + I++ + G + KIF +M + G
Sbjct: 397 GYVRAGEPEKAEEI-LNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIA 455
Query: 403 ARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAV 455
K F+TL+ Y A+ P + + M NV P K VA +A+R T +
Sbjct: 456 PNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVA--EAWRATGL 508
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/286 (18%), Positives = 117/286 (40%), Gaps = 38/286 (13%)
Query: 136 ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
I+ ++ ++V +L + + K + +Y L+ + ++ ++ G+EP
Sbjct: 81 IMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEP 140
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
DS + + G ++A + W
Sbjct: 141 DSIFFNAVINAFSESGNMQEA----------------------------------MKYFW 166
Query: 256 KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADH 312
K+ ES P I+ +G + EE++ + + MS+ + + + Y L++ + +
Sbjct: 167 KMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNK 226
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
K + K ++V +M SG + ++ + + + GE +A+ I+L+ Q N +P +
Sbjct: 227 KNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSN-VQPNERT 285
Query: 373 YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+I+ Y K G I + +RM+ +G F +L++ +I+A
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ +E +++ + + K S YT LL K ++ Q+ E+G + ++
Sbjct: 87 RPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFN 146
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A++ E G +++A K ++ KP S++ ++ Y G+ ++K+ M Q
Sbjct: 147 AVINAFSESGNMQEAMKYFWKMKESGS-KPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205
Query: 399 VGYV-ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVA 445
V + + LV+A+ N K A+ + +M A + P+ +A
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIA 255
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 158/355 (44%), Gaps = 10/355 (2%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSY 165
N+++A + F +MK+ G T+ N L+ Y + + + LL + + ENV+ +Y
Sbjct: 157 NMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTY 216
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+L+ ++ VV M + G++PD+ T +A Y G +AE ++ EM+
Sbjct: 217 NVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQN 276
Query: 226 DNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
N++ + TC +++ Y + GK A Q K P L V + I+ + +
Sbjct: 277 SNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDG 336
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
V M + K ++ ++ ++ + K +++ M ++ + L K
Sbjct: 337 VNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAK 396
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+V GE EKA+ I L A ++ F P + I++ + G + KIF +M + G
Sbjct: 397 GYVRAGEPEKAEEI-LNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIA 455
Query: 403 ARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAV 455
K F+TL+ Y A+ P + + M NV P K VA +A+R T +
Sbjct: 456 PNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVA--EAWRATGL 508
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/286 (18%), Positives = 117/286 (40%), Gaps = 38/286 (13%)
Query: 136 ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
I+ ++ ++V +L + + K + +Y L+ + ++ ++ G+EP
Sbjct: 81 IMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEP 140
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
DS + + G ++A + W
Sbjct: 141 DSIFFNAVINAFSESGNMQEA----------------------------------MKYFW 166
Query: 256 KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADH 312
K+ ES P I+ +G + EE++ + + MS+ + + + Y L++ + +
Sbjct: 167 KMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNK 226
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
K + K ++V +M SG + ++ + + + GE +A+ I+L+ Q N +P +
Sbjct: 227 KNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSN-VQPNERT 285
Query: 373 YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+I+ Y K G I + +RM+ +G F +L++ +I+A
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDA 331
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ +E +++ + + K S YT LL K ++ Q+ E+G + ++
Sbjct: 87 RPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFN 146
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A++ E G +++A K ++ KP S++ ++ Y G+ ++K+ M Q
Sbjct: 147 AVINAFSESGNMQEAMKYFWKMKESGS-KPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205
Query: 399 VGYV-ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVA 445
V + + LV+A+ N K A+ + +M A + P+ +A
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIA 255
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 178/406 (43%), Gaps = 28/406 (6%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y C+D K + A + ++ P+ +V Y +++ + +AEE+F
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQGLKPD----DVSYTSMIWVLCKAGRLGEAEELF 307
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQ 174
+M+ + ++A N +++ Y + + A LL L E+ + + S+ ++ G+
Sbjct: 308 AQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP-SVVSFNSILTCLGK 366
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
+ + E MK + EP+SST I+ GGR E+A +L EME +L + T
Sbjct: 367 KRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 425
Query: 235 CRLLLPLYAELGKADQVARIWKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
+++ L KA ++ +K+ ES NP + I+ GK +V+EA +F+
Sbjct: 426 VNIMVD---RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE 482
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
+M + YT+L++ + H G + K++ GC + + + G
Sbjct: 483 KMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 542
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
EVEK ++ + + F P SY +++ K G T IFH M+Q G+ + +
Sbjct: 543 EVEKG-RMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAY 601
Query: 409 QTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQVDAFRK 452
+V + + AY I + M+ V P +A A VD K
Sbjct: 602 NAVVDGFCKSGKVHKAYEILEEMKEKCVQPT--VATYGAIVDGLAK 645
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 127/301 (42%), Gaps = 12/301 (3%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
SY ILI ++ + AMK +G D+ + + G+ KA +L+EM
Sbjct: 565 SYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEM 624
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM--AAIEAWGKLNKV 280
+ ++ T ++ A++ + D+ +++ +S L+V + + I+ +GK+ ++
Sbjct: 625 KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRI 684
Query: 281 EEAEAVFKRMSKTWKKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+EA + + M K K L+ YT +LL + +++ + M E C +
Sbjct: 685 DEAYLILEEMMK--KGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYS 742
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L+ + KA + + Q+ P +Y ++ AK G+I +F R +
Sbjct: 743 ILINGLCRVQKYNKA-FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 801
Query: 399 VGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVS 456
G + F L++ NA AY + + R N + + ++ +DA K+
Sbjct: 802 NGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRIN--IKSCISLLDALNKSECL 859
Query: 457 E 457
E
Sbjct: 860 E 860
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI-LLKA 360
YT L+ A+ + + +L++QM E G +G + LV+ G+V AD++ L+
Sbjct: 182 YTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQV--ADALALVDE 239
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ + +P Y + +D + K G++ K FH ++ G
Sbjct: 240 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG 279
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLME 154
Y L+ ++ +F+ MK +GF + + A N ++ + + K K ++L M+
Sbjct: 566 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 625
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
++ V+ T +Y ++D + + L + E KS+GIE + + L + GR +
Sbjct: 626 EKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRID 685
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLL 239
+A +L+EM L + +T LL
Sbjct: 686 EAYLILEEMMKKGLTPNVYTWNSLL 710
>gi|302801852|ref|XP_002982682.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
gi|300149781|gb|EFJ16435.1| hypothetical protein SELMODRAFT_421991 [Selaginella moellendorffii]
Length = 414
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 184/416 (44%), Gaps = 52/416 (12%)
Query: 34 LRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGE 93
LR +G+A ++ +W+ NK + E D+ L+L+ ++ Q + + +P R E
Sbjct: 13 LRITAKFGQAREICDWMIRNKVFEIEESDHVLLLELVGRISKFQATRCFWE-MPAELRSE 71
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
Y +L + + AE+ + MK L L R++
Sbjct: 72 AAYTAMLQVFARWHAIPAAEDTMSEMKS-------------LNLITRVE----------- 107
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
Y I++D+ + N+ + + + + S G+ PD+ T I+ + G
Sbjct: 108 ----------PYNIMLDMYKRKNEDDKVRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGF 157
Query: 214 EKAEAMLKEMEGDNLKEHR----WTCRL-LLPLYAELGKADQVARI----WKLCESNPWL 264
+ EA +++ + L + + C L + L +L + + I +K S+ +
Sbjct: 158 DGIEAEVRKFLDEQLTSRQPLFIYECMLRIYTLLRDLTAIENLRSILLKTFKKFSSSSY- 216
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
C+ ++A+ +L +VE AE +F + + L+ + Y A++ VYA + + K +L KQ
Sbjct: 217 -NCL--LDAYRQLGEVERAERLFNEIGNKFT-LNIQSYRAMIAVYASNGRMEKANELYKQ 272
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF---KPMFSSYMLIMDQYA 381
+ +G P + A+V +++ + A KA ++ KP+ ++ +L++ A
Sbjct: 273 LFRAGFECHPAIYHAMVAGYIDARDHSNALIQYGKAWDRSLLGHPKPLRATTLLVLRVLA 332
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPN 437
++GD E I +++ + + + L++AYI A+ P +G RM A V PN
Sbjct: 333 EQGDFSRAESIVRDLKRERQGSDVEVYNWLLKAYIKAEVPVFGFDGRMLAAGVRPN 388
>gi|302142021|emb|CBI19224.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 162/360 (45%), Gaps = 15/360 (4%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + L + ++G+ ++ +++ L + + AL++ W+E + D+
Sbjct: 50 PRRSATAVLQNWIDQGHKVTASDLRNVSRQLLKSKRHKHALEILAWMEAQNRFQMSAADH 109
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A L+LI K++ L +AE Y + +P S + LL V ++KAE + ++ D G
Sbjct: 110 AIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAYVKERAIEKAEALMLKLNDLG 169
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
V+ N+++ LY + ++V V+L M++ + L SY + + + + L +
Sbjct: 170 LTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNVLSYNLWMSACSEVSGLASAE 229
Query: 183 QVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
V + M + +E ST + LA Y+ G +KA LK E +R L+ +
Sbjct: 230 MVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALKNAEKKLSAHNRLGYFFLITM 289
Query: 242 YAELGKADQVARIWKLCE-------SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM-SKT 293
YA L ++V R+W+ + S ++ + + + KL + EAE +F+ SK
Sbjct: 290 YASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLV----KLGDIAEAERIFREWESKC 345
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
W K + LL Y + K + L E G W+ L++ ++ ++KA
Sbjct: 346 W-KYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWEILMEGWMKSQNMDKA 404
>gi|357163843|ref|XP_003579864.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Brachypodium distachyon]
Length = 422
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 10/256 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S L ++A EG E+ +L R Y AL+++EW++T+ + D E DY
Sbjct: 83 SATEALDRWAGEGRAAPAPELRRVARDLSRARRYKHALEVAEWMKTHHESDLSENDYGVR 142
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+DLI K+ G AE + +K+P + Y LL + KAE +F RMKD +
Sbjct: 143 IDLITKVFGANAAEDFFEKLPSEAKSLEAYTALLHSYARSKMTDKAERLFERMKDADLSI 202
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N+++ LY + + KV V ++++NV F+Y + I S DL ++
Sbjct: 203 DVLVYNEMMTLYISVGELDKVPAVAEELKRQNVSPDLFTYNLRISASAASMDLEIFKGIL 262
Query: 186 EAMKSEGIEPDSSTQAILAKH----YVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
+ M +P+S+ L ++ YV+ + + L E E + + W T L+
Sbjct: 263 DEMSK---DPNSNEGWTLYRNLATIYVNASQLVSSGNSLVEAEA-KISQREWITYDFLIL 318
Query: 241 LYAELGKADQVARIWK 256
L+ LG ++V IWK
Sbjct: 319 LHTGLGNLERVKDIWK 334
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE F+++ K L + YTALL YA KM K + L ++M ++ I L ++ ++
Sbjct: 155 AEDFFEKLPSEAKSL--EAYTALLHSYARSKMTDKAERLFERMKDADLSIDVLVYNEMMT 212
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-RQVGY 401
L++ GE++K ++ + ++QN P +Y L + A D+ + I M +
Sbjct: 213 LYISVGELDKVPAVAEELKRQN-VSPDLFTYNLRISASAASMDLEIFKGILDEMSKDPNS 271
Query: 402 VARFKQFQTLVQAYINA 418
+ ++ L Y+NA
Sbjct: 272 NEGWTLYRNLATIYVNA 288
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 166/370 (44%), Gaps = 18/370 (4%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL- 151
+V Y +++ + +AEE+F +M+ + ++A N +++ Y + + A LL
Sbjct: 18 DVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLE 77
Query: 152 -LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
L E+ + + S+ ++ G+ + + E MK + EP+SST I+ G
Sbjct: 78 RLRERGCIP-SVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLG 135
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES------NPWL 264
GR E+A +L EME +L + T +++ L KA ++ +K+ ES NP
Sbjct: 136 GRVEEAYRILDEMEHASLFPNLLTVNIMVD---RLCKARKLEEAYKIFESASQRGCNPDC 192
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ I+ GK +V+EA +F++M + YT+L++ + H G + K+
Sbjct: 193 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 252
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
+ GC + + + GEVEK ++ + + F P SY +++ K G
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKG-RMIFEDIRSYGFLPDVRSYSILIHGLTKAG 311
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAA 442
T IFH M+Q G+ + + +V + + AY I + M+ V P +A
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPT--VAT 369
Query: 443 QVAQVDAFRK 452
A VD K
Sbjct: 370 YGAIVDGLAK 379
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 154/369 (41%), Gaps = 21/369 (5%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +D + K + +A +K+ ++ VVY +L+ N + ++F +
Sbjct: 195 YCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELI 254
Query: 121 DKGF-PVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQF-----SYKILIDIKGQ 174
+G P + + ++K + +K + E+++ F SY ILI +
Sbjct: 255 RRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF-----EDIRSYGFLPDVRSYSILIHGLTK 309
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
+ + AMK +G D+ + + G+ KA +L+EM+ ++ T
Sbjct: 310 AGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVAT 369
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM--AAIEAWGKLNKVEEAEAVFKRMS 291
++ A++ + D+ +++ +S L+V + + I+ +GK+ +++EA + + M
Sbjct: 370 YGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMM 429
Query: 292 KTWKKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
K K L+ YT +LL + +++ + M E C + L+ +
Sbjct: 430 K--KGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQK 487
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
KA + + Q+ P +Y ++ AK G+I +F R + G + F
Sbjct: 488 YNKA-FVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFN 546
Query: 410 TLVQAYINA 418
L++ NA
Sbjct: 547 ALIEGMSNA 555
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
+K++G++PD + + GR +AE + +ME + + ++ Y G+
Sbjct: 9 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 68
Query: 248 ADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
+ ++ +L E P + + + GK KV+EA ++F+ M K + S+ Y
Sbjct: 69 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSST-YNI 127
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
++ + + + ++ +M + L + +V + ++E+A I A Q+
Sbjct: 128 IIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG 187
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
P +Y ++D K+G + ++F +M G+ A + +L++ +
Sbjct: 188 -CNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 238
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 149/346 (43%), Gaps = 8/346 (2%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSY 165
NVK+A E+F +M++ G T+ N L+ Y + K + + LL + N+K +Y
Sbjct: 142 NVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTY 201
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
IL+ + + VV M + G++PD T LA+ Y G KAE+++ +M
Sbjct: 202 NILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLN 261
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ + TC +++ Y E G + R+ + +P L + + I+ + + +
Sbjct: 262 KKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDG 321
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
+ M ++ K ++ ++ ++ + K +++ M +SG + L K
Sbjct: 322 VDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAK 381
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
V GE KA+S LL + +P + I+ + G + K+F M +
Sbjct: 382 GFVRAGEPVKAES-LLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVS 440
Query: 403 ARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
K F+TL+ Y AK P A I M NV P + V++
Sbjct: 441 PNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSE 486
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/283 (18%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 136 ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
IL +R ++ + + ++ + T +Y L+ + + ++ M+ GI+P
Sbjct: 66 ILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKP 125
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
DS + + G ++A + ++ME K T L
Sbjct: 126 DSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTL----------------- 168
Query: 256 KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKM 314
I+ +G + K EE+ + + M++T K + + Y L+ K
Sbjct: 169 ---------------IKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKS 213
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
+ + ++V QM SG + ++ L + + + GE KA+SI++ + K P +
Sbjct: 214 IKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNK-KVNPNERTCG 272
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
+I+ Y ++G++ ++ +RMR +G F +L++ +++
Sbjct: 273 IIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLD 315
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Query: 238 LLPLYAELGKADQVARIWK-LCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + E GK + I+ L E P A + A + + + + M +T
Sbjct: 63 LMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 122
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K + A++ +++ + + ++ ++M ESGC ++ L+K + + E++
Sbjct: 123 IKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESM 182
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+L + KP +Y +++ K+ I + H+M G + TL +A
Sbjct: 183 KLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARA 242
Query: 415 Y 415
Y
Sbjct: 243 Y 243
>gi|125548508|gb|EAY94330.1| hypothetical protein OsI_16098 [Oryza sativa Indica Group]
Length = 430
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 10/256 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S + L ++A EG S AE+ +L Y AL+++EW++T+ + D E DY
Sbjct: 91 SATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMR 150
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+DLI ++ G AE + +K+P + Y LL + KAE +F RMKD +
Sbjct: 151 IDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSM 210
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N+++ LY + + KV + ++++ F+Y + I S DL G ++
Sbjct: 211 NILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGIL 270
Query: 186 EAMKSEGIEPDSSTQ----AILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLLP 240
+ M +P+S+ LA YV G+ + L E E + + W T L+
Sbjct: 271 DEMSK---DPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEA-KISQREWITYDFLVI 326
Query: 241 LYAELGKADQVARIWK 256
L+ LG D++ IWK
Sbjct: 327 LHTGLGNRDRIKDIWK 342
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE F+++ + L + YTALL YA KM K + L K+M ++ + L ++ ++
Sbjct: 163 AEDFFEKLPACVQSL--EAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMT 220
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-RQVGY 401
L++ GE++K I + ++Q KF P +Y L + A D+ + I M +
Sbjct: 221 LYISVGELDKVPVIAEELKRQ-KFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNS 279
Query: 402 VARFKQFQTLVQAYINA 418
+K +Q L Y++A
Sbjct: 280 NEGWKLYQNLAVIYVDA 296
>gi|18415979|ref|NP_568214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75165070|sp|Q94B59.1|PP372_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g09450, mitochondrial; Flags: Precursor
gi|14596093|gb|AAK68774.1| putative protein [Arabidopsis thaliana]
gi|27311913|gb|AAO00922.1| putative protein [Arabidopsis thaliana]
gi|332004012|gb|AED91395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 163/338 (48%), Gaps = 19/338 (5%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + L K+ EGN ++ E+ LR R Y AL+++EW+ +++ + DY
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEESKISDADY 126
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNR-MKDK 122
AS +DLI+K+ G+ AE Y + + + Y +LL A ++AE +F R ++
Sbjct: 127 ASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESD 186
Query: 123 GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
+ N+++ LY + + +KV +V+ +++++ V F+Y + + + ++ +
Sbjct: 187 SLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDEL 246
Query: 182 DQVVEAMKSEGIEPDSSTQAI-LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLL 239
+++E M+ + + + I L Y++ R AE+ L ++ + W T L+
Sbjct: 247 RKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLM 306
Query: 240 PLYAELGKADQVARIWK-LCESNPWLD----VCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ LG + +IWK L +N L +C+ + ++ L + EAE + + W
Sbjct: 307 ILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICV--LSSYLMLGHLREAEEIIHQ----W 360
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
K+ T + A A ++L+ +D+ + SG H+
Sbjct: 361 KESKTTEFDA----SACLRILNAFRDVGLEGIASGFHL 394
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 27/262 (10%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI---LAKHYV 208
+++ E K++ Y ID+ + + G+D EG++ DS T L Y
Sbjct: 113 MVQHEESKISDADYASRIDLISK---VFGIDAAERYF--EGLDIDSKTAETYTSLLHAYA 167
Query: 209 SGGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES------- 260
+ + E+AEA+ K + E D+L T ++ LY +G+ ++V + ++ +
Sbjct: 168 ASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDI 227
Query: 261 ---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
N WL C A +L K+ E ++ W + Y L +Y + ++
Sbjct: 228 FTYNLWLSSCAATFNI-DELRKILEEMRHDASSNEGWVR-----YIDLTSIYINSSRVTN 281
Query: 318 GKDLVKQMAE-SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
+ + AE S + +D L+ LH G D I + N+ SY+ +
Sbjct: 282 AESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSS-RSYICV 340
Query: 377 MDQYAKRGDIHSTEKIFHRMRQ 398
+ Y G + E+I H+ ++
Sbjct: 341 LSSYLMLGHLREAEEIIHQWKE 362
>gi|302780277|ref|XP_002971913.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
gi|300160212|gb|EFJ26830.1| hypothetical protein SELMODRAFT_412643 [Selaginella moellendorffii]
Length = 570
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 187/416 (44%), Gaps = 16/416 (3%)
Query: 15 YAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLR 74
+ E D+++A + + L Y +++ ++ ++K + E DY + A
Sbjct: 121 FRENELDMTKAMMRGVLFKLLRNEKYKPGWKVANYMIRSEKFELGELDYMFQIAFAALAG 180
Query: 75 GLQKAESYIQKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQ 133
+ AE+ +P ++ + L+A N E++F +K + + + NQ
Sbjct: 181 CDRAAENIFANLPRVYKRKKALLVLMAGSSPQRENRVVMEKLFKELKHRSWYTEASGLNQ 240
Query: 134 LLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE- 191
+++ + D +K++ D+ + V SY + + + + +G+++V + ++ +
Sbjct: 241 MMLFSLQPDLRKRIPDLFEEAKSLGVAPDVSSYNLYLGFHCKEKNASGLEEVYQMLQEDP 300
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME----GDNLKEHRWTCRLLLPLYAELGK 247
PD ST ILA Y+S G +KA L E+E + + T LL LY +
Sbjct: 301 NARPDESTLLILACGYISVGCFDKAGKALVELEEGLDSGLFRRKQATYNKLLRLYGDTKD 360
Query: 248 ADQVARIWKLCESNPW--LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
+ V IW + S P +D AI A+GK V +AE +F ++ L T A+
Sbjct: 361 KEGVENIWSILSSRPLKAVDSYSYAIAAFGKAEGVHKAEEIFAKVDGL---LETNQVIAM 417
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
L VY + K ++L +++ + + L+ ++ GEV+KA + +
Sbjct: 418 LSVYTHYGYADKARELFQKLPRKRMKHRLVVYKYLIAGYLREGEVKKALQVFTMGCTVLR 477
Query: 366 FKPMFSSY----MLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
+ + S++ + ++D +A RG++ ++IF + + + ++ +++AY+N
Sbjct: 478 DRCICSAWERVVLDLLDHFASRGEVAVIDRIFRMNSVLKHFINMRVYRVVLKAYLN 533
>gi|21592522|gb|AAM64472.1| unknown [Arabidopsis thaliana]
Length = 409
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 163/338 (48%), Gaps = 19/338 (5%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + L K+ EGN ++ E+ LR R Y AL+++EW+ +++ + DY
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEESKISDADY 126
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNR-MKDK 122
AS +DLI+K+ G+ AE Y + + + Y +LL A ++AE +F R ++
Sbjct: 127 ASRIDLISKVFGIDAAERYFEGLHIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESD 186
Query: 123 GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
+ N+++ LY + + +KV +V+ +++++ V F+Y + + + ++ +
Sbjct: 187 SLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDEL 246
Query: 182 DQVVEAMKSEGIEPDSSTQAI-LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLL 239
+++E M+ + + + I L Y++ R AE+ L ++ + W T L+
Sbjct: 247 RKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLM 306
Query: 240 PLYAELGKADQVARIWK-LCESNPWLD----VCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ LG + +IWK L +N L +C+ + ++ L + EAE + + W
Sbjct: 307 ILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICV--LSSYLMLGHLREAEEIIHQ----W 360
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
K+ T + A A ++L+ +D+ + SG H+
Sbjct: 361 KESKTTEFDA----SACLRILNAFRDVGLEGIASGFHL 394
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 27/262 (10%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI---LAKHYV 208
+++ E K++ Y ID+ + + G+D EG+ DS T L Y
Sbjct: 113 MVQHEESKISDADYASRIDLISK---VFGIDAAERYF--EGLHIDSKTAETYTSLLHAYA 167
Query: 209 SGGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES------- 260
+ + E+AEA+ K + E D+L T ++ LY +G+ ++V + ++ +
Sbjct: 168 ASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDI 227
Query: 261 ---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
N WL C A +L K+ E ++ W + Y L +Y + ++
Sbjct: 228 FTYNLWLSSCAATFNI-DELRKILEEMRHDASSNEGWVR-----YIDLTSIYINSSRVTN 281
Query: 318 GKDLVKQMAE-SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
+ + AE S + +D L+ LH G D I + N+ SY+ +
Sbjct: 282 AESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSS-RSYICV 340
Query: 377 MDQYAKRGDIHSTEKIFHRMRQ 398
+ Y G + E+I H+ ++
Sbjct: 341 LSSYLMLGHLREAEEIIHQWKE 362
>gi|21740710|emb|CAD40831.1| OSJNBa0086B14.3 [Oryza sativa Japonica Group]
gi|116310079|emb|CAH67100.1| H0818E04.17 [Oryza sativa Indica Group]
Length = 430
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 8/255 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S + L ++A EG S AE+ +L Y AL+++EW++T+ + D E DY
Sbjct: 91 SATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMR 150
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+DLI ++ G AE + +K+P + Y LL + KAE +F RMKD +
Sbjct: 151 IDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSM 210
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N+++ LY + + KV + ++++ F+Y + I S DL G ++
Sbjct: 211 NILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGIL 270
Query: 186 EAMKSEGIEPDSSTQ----AILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+ M +P+S+ LA YV G+ + L E E + T L+ L
Sbjct: 271 DEMSK---DPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLVIL 327
Query: 242 YAELGKADQVARIWK 256
+ LG D++ IWK
Sbjct: 328 HTGLGNRDRIKDIWK 342
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE F+++ + L + YTALL YA KM K + L K+M ++ + L ++ ++
Sbjct: 163 AEDFFEKLPACVQSL--EAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMT 220
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-RQVGY 401
L++ GE++K I + ++Q KF P +Y L + A D+ + I M +
Sbjct: 221 LYISVGELDKVPVIAEELKRQ-KFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNS 279
Query: 402 VARFKQFQTLVQAYINA 418
+K +Q L Y++A
Sbjct: 280 NEGWKLYQNLAVIYVDA 296
>gi|125590560|gb|EAZ30910.1| hypothetical protein OsJ_14991 [Oryza sativa Japonica Group]
Length = 471
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 8/255 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
S + L ++A EG S AE+ +L Y AL+++EW++T+ + D E DY
Sbjct: 132 SATAALERWAGEGRAASAAELRGIARDLSRAGRYKHALEVAEWMKTHHESDLSENDYGMR 191
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+DLI ++ G AE + +K+P + Y LL + KAE +F RMKD +
Sbjct: 192 IDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLFKRMKDANLSM 251
Query: 127 TSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N+++ LY + + KV + ++++ F+Y + I S DL G ++
Sbjct: 252 NILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAASMDLEGFKGIL 311
Query: 186 EAMKSEGIEPDSSTQ----AILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+ M +P+S+ LA YV G+ + L E E + T L+ L
Sbjct: 312 DEMSK---DPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRREWITYDFLVIL 368
Query: 242 YAELGKADQVARIWK 256
+ LG D++ IWK
Sbjct: 369 HTGLGNRDRIKDIWK 383
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE F+++ + L + YTALL YA KM K + L K+M ++ + L ++ ++
Sbjct: 204 AEDFFEKLPACVQSL--EAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMT 261
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-RQVGY 401
L++ GE++K I + ++Q KF P +Y L + A D+ + I M +
Sbjct: 262 LYISVGELDKVPVIAEELKRQ-KFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNS 320
Query: 402 VARFKQFQTLVQAYINA 418
+K +Q L Y++A
Sbjct: 321 NEGWKLYQNLAVIYVDA 337
>gi|302798905|ref|XP_002981212.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
gi|300151266|gb|EFJ17913.1| hypothetical protein SELMODRAFT_420695 [Selaginella moellendorffii]
Length = 414
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 184/416 (44%), Gaps = 52/416 (12%)
Query: 34 LRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGE 93
LR +G+A ++ +W+ NK + E D+ L+L+ ++ Q + + +P R E
Sbjct: 13 LRITAKFGQAREICDWMIRNKVFEIEESDHVLLLELVGRISKFQATRCFWE-MPAELRSE 71
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
Y +L + + AE+ + MK L L R++
Sbjct: 72 DAYTAMLQVFARWHAIPAAEDTMSEMKS-------------LNLITRVE----------- 107
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
Y I++D+ + N+ + + + + S G+ PD+ T I+ + G
Sbjct: 108 ----------PYNIMLDMYKRKNEDDKVRAMYDELSSLGVAPDAHTYLIVLRAKQKIGGF 157
Query: 214 EKAEAMLKEMEGDNLKEHR----WTCRL-LLPLYAELGKADQVARI----WKLCESNPWL 264
+ EA +++ + L + + C L + L +L + + I +K S+ +
Sbjct: 158 DGIEAEVRKFLDEQLTSRQPLFIYECMLRIYTLLRDLAAIENLRSILLKTFKKFSSSSY- 216
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
C+ ++++ +L +VE AE +F + + L+ + Y A++ VYA + + K +L KQ
Sbjct: 217 -NCL--LDSYRQLGEVERAERLFNEIGNKFT-LNIQSYRAMIAVYASNGRMEKANELYKQ 272
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF---KPMFSSYMLIMDQYA 381
+ +G P + A+V +++ + A KA ++ KP+ ++ +L++ A
Sbjct: 273 LFRAGFECHPAIYHAMVAGYIDARDHSNALIQYGKAWDRSLLGHPKPLRATTLLVLRVLA 332
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPN 437
++GD E I +++ + + + L++AYI A+ P +G RM A V PN
Sbjct: 333 EQGDFSRAESIVRDLKRERQGSDVEVYNWLLKAYIKAEVPVFGFDGRMLAAGVRPN 388
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 172/384 (44%), Gaps = 20/384 (5%)
Query: 26 EIALAMANLRTRRMYGKALQLSEWL--ETNKKLDFIERDYASCLDLIAKLRGLQKAESYI 83
+I LR R + + + EW+ ++ + D I Y +D + R L KAES
Sbjct: 131 DIVNVAVQLRLNRQWEPIITVCEWILYRSSFRPDII--CYNLLIDAYGQKRQLNKAESIY 188
Query: 84 QKIPES--FRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--ILY 138
+ E+ E Y LL A C +G + +AE V + M+ G P T+ N L +L
Sbjct: 189 MALLEAHCVPTEDTYALLLRAYCNSGQ-LHRAEGVISEMQKNGLPPTATVYNAYLDGLLK 247
Query: 139 KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSS 198
R +K V +V M+KE + +Y ++I++ G++ +V MK+ G +P+
Sbjct: 248 ARCSEKAV-EVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNIC 306
Query: 199 TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC 258
T L + G EKAE + +EM+ + + L+ Y+ G + I+ L
Sbjct: 307 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM 366
Query: 259 E---SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
E P ++A+G+ +EAEA F+ + + + + K + LL +A +
Sbjct: 367 EHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNV 426
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ------QNKFKPM 369
++ ++++ Q+ +SG A +A++ + G ++ + +L ++ P
Sbjct: 427 ARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPD 486
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIF 393
S+Y ++++ Y + G + E F
Sbjct: 487 TSTYNVLVNVYGRAGYLDRMEAAF 510
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 107/250 (42%), Gaps = 20/250 (8%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEEVF M+ G +A N L+ Y R + +++ LME
Sbjct: 309 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEH 368
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA----MKSEGIEPDSSTQAILAKHYVSGG 211
+ + SY IL+D G++ G+ Q EA +K +G+ P + +L + G
Sbjct: 369 MGCEPDRASYNILVDAYGRA----GLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSG 424
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE----------SN 261
+ E ++ ++ L+ + +L Y G+ D + R+ E +
Sbjct: 425 NVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAA 484
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P + +G+ ++ EA F+ ++ +T+ + YA K + ++
Sbjct: 485 PDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEI 544
Query: 322 VKQMAESGCH 331
++M ++GC+
Sbjct: 545 FEEMVDAGCY 554
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 91/259 (35%), Gaps = 68/259 (26%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
Y +LID GQ L + + A+ P T A+L + Y + G+ +AE ++ E
Sbjct: 166 ICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISE 225
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
M+ + L P V A ++ K E+
Sbjct: 226 MQKNGLP--------------------------------PTATVYNAYLDGLLKARCSEK 253
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A V++RM K + +T+ YT ++ VY K + +M GC
Sbjct: 254 AVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGC------------ 301
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
KP +Y +++ +A+ G E++F M+Q G+
Sbjct: 302 ------------------------KPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHE 337
Query: 403 ARFKQFQTLVQAYINAKTP 421
+ L++AY A P
Sbjct: 338 PDVYAYNALMEAYSRAGLP 356
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 274 WGKLNKVEEAE---------AVFKRMSKTWKKLSTKH---------------YTALLKVY 309
W L+K+ +A AV R+++ W+ + T Y L+ Y
Sbjct: 116 WESLDKIPQAHDLWDDIVNVAVQLRLNRQWEPIITVCEWILYRSSFRPDIICYNLLIDAY 175
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM 369
+ L+K + + + E+ C + L++ + G++ +A+ ++ Q+N P
Sbjct: 176 GQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVI-SEMQKNGLPPT 234
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--D 427
+ Y +D K +++ RM++ + + ++ Y AK P ++ +
Sbjct: 235 ATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFN 294
Query: 428 RMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
M+ PN + A V+AF + + E
Sbjct: 295 EMKTIGCKPN--ICTYTALVNAFAREGLCE 322
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 4/240 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y L+ N +AEE+F ++ GF + N LL Y R + A +V M
Sbjct: 234 TYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAM 293
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ V+ Q SY ILID G++ V ++MK G +P + +L Y G+
Sbjct: 294 VEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKV 353
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAA 270
+AE +++E+E +K + LL Y G+ D++ + + S+ P +
Sbjct: 354 TEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTL 413
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+ + +E+AE VF + +T+L+ YA K+ K + ++M ++GC
Sbjct: 414 INAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGC 473
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 157/388 (40%), Gaps = 31/388 (7%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLD--------LIAKLRGLQ--KAESYIQKIPES 89
YGK+ Q W E K + +D+ CL L A RG+Q KAE ++ ES
Sbjct: 93 YGKSKQ---WREAEKTFHLM-KDF-QCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKES 147
Query: 90 -----------FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG-FPVTSFACNQLLIL 137
F G Y T L + +AE+ F M+ +G P + + I
Sbjct: 148 NYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIY 207
Query: 138 YKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
K K D+ M K ++Y L++ + + +++ ++S G PD
Sbjct: 208 GKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDV 267
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG-KADQVARIWK 256
T L + Y G A+ + + M ++ + + +L+ + G AD A
Sbjct: 268 YTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDS 327
Query: 257 LCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
+ E+ P + M + ++ K KV EAE + + + + K T + +LL Y +
Sbjct: 328 MKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGR 387
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
+ + + L++ M S + L+ + +GG +EKA+ + + + P S+
Sbjct: 388 IDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEV-FNSLESKGLTPDVMSWT 446
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+M YA+R IF +M + G +
Sbjct: 447 SLMGAYAQRKLFRKCVSIFQKMVKAGCI 474
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 132/319 (41%), Gaps = 43/319 (13%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKEN------VKLTQF 163
++AE+ F+ MKD T + N LL Y R + + A+ L KE+ V+ F
Sbjct: 100 REAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIF 159
Query: 164 S----YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
S Y +++ G+S L+ + M+ +GI P +T I+ Y +KA+ +
Sbjct: 160 SGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDL 219
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNK 279
+ M + +T L+ +A G C+ A E + +L
Sbjct: 220 FRSMRKALCPPNLYTYTALMNAHAREGN-------------------CVRAEEIFAELQS 260
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
V V+ Y ALL+ Y+ + + K++ + M E+G ++++
Sbjct: 261 VGFIPDVYT-------------YNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNI 307
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
L+ G A ++ + ++ FKP S+ML++ YAK G + E++ +
Sbjct: 308 LIDAFGRAGLTADAQAVY-DSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENS 366
Query: 400 GYVARFKQFQTLVQAYINA 418
G F +L+ AY N+
Sbjct: 367 GVKPDTFMFNSLLSAYGNS 385
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 92/259 (35%), Gaps = 63/259 (24%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
+ +LID G+S ++ MK P ++ +L Y G + EKAE + EM+
Sbjct: 86 FNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMK 145
Query: 225 GDNLKEH--RWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
N W + Y N +L+V GK ++ +
Sbjct: 146 ESNYSPGTVEWMIFSGIATY------------------NTYLEVL-------GKSGRLSQ 180
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE F+ M K + +T ++ +Y K DL + M ++ C
Sbjct: 181 AEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALC------------ 228
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
P +Y +M+ +A+ G+ E+IF ++ VG++
Sbjct: 229 ------------------------PPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFI 264
Query: 403 ARFKQFQTLVQAYINAKTP 421
+ L++AY + P
Sbjct: 265 PDVYTYNALLEAYSRGEHP 283
>gi|297800434|ref|XP_002868101.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
gi|297313937|gb|EFH44360.1| hypothetical protein ARALYDRAFT_915040 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 115/227 (50%), Gaps = 2/227 (0%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
I L + ++G+ + +++ + NLR + KAL+ SEW+ K D + DY++ L
Sbjct: 51 ITPMLASWQKQGHQVKPSDLRGFIKNLRGSNQFSKALEASEWMGEQKVFDIVPEDYSARL 110
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCV-AGNNVKKAEEVFNRMKDKGFPV 126
L+ + GL++AE + + IP++ VY TLL++ + N + KAE F +M++ GF +
Sbjct: 111 HLVENVLGLEEAEKFFKSIPKNMTDYFVYATLLSSYTKSENTLDKAEATFEKMRELGFLL 170
Query: 127 TSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N ++ LY +L K + + L+ M++ V+ + ++ + + + M+
Sbjct: 171 KPSPFNSMISLYGQLQKLDMVEKLVREMQETKVECDSPTVNNVLRVYADTCKIKAMETFK 230
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ +GI+ + T +AK Y+ G EKA M + G + +R
Sbjct: 231 TWVDEQGIKLEGGTIVAMAKAYLRSGSIEKAIEMYGNVAGSEKEVYR 277
>gi|326533934|dbj|BAJ93740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 162/359 (45%), Gaps = 16/359 (4%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
AP + + L ++ E L ++ + LR R + +AL+L +W+E + + + D
Sbjct: 49 APLGCVAAELDRWLCERKPLCGHQLLFYVRKLRNFRQHRRALELMDWMEA-RGANLLPGD 107
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
+A LDLI + GL+ AE Y +P+ ++ Y +LL +C A + +KA E++ +M+
Sbjct: 108 HALRLDLICTVNGLEAAEEYFLSLPDMYKSVKTYSSLL-HCYAEHKAEKALELYEKMRTM 166
Query: 123 GFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
+ L+ LY K +K+ M V+ F+Y +L + N L
Sbjct: 167 NIVPNTLVYKNLMSLYLKTGQPEKILQTFEEMRANGVRTDNFTYYMLTESHIMLNGLEST 226
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
++ +E ++ + I S LA Y G+ +KA LK+ E + + LL L
Sbjct: 227 EKFLEDLE-KSIPVHWSLYTRLADSYNKVGQFDKAGLTLKKAEEVMDRGEMFAWHNLLSL 285
Query: 242 YAELGKADQVARIW-------KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
YA G +V R+W K+ + +L V ++A++ KL+ + + VF+ T
Sbjct: 286 YASSGNLSEVKRVWSSLRSELKISSNRSYL-VMLSALK---KLDDFDCMQQVFQEWELTQ 341
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ + ++K Y M + + L +Q A + H PL + + ++E E A
Sbjct: 342 ESYDMRIPNVMIKAYLAKDMTDEAEAL-RQTAMAQGHSNPLTFYIFTESYLEKSRTEAA 399
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 185/414 (44%), Gaps = 31/414 (7%)
Query: 60 ERDYASCLDLIAKLR--GLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFN 117
++ + S L LI+K++ GL+ P++ +++ ++ N+ +A ++F
Sbjct: 367 QKHFHSLLSLISKVQKNGLR---------PDT----ILFNAIINASSESGNLDQAMKIFE 413
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQS 175
+MK+ G T+ N L+ Y ++ K + + LL ++ E ++ + IL+
Sbjct: 414 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQ 473
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML-KEMEGDNLKEHRWT 234
+ +V M+S G++PD+ T LA+ Y G AE M+ M + +K + T
Sbjct: 474 RKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLHNKVKPNVRT 533
Query: 235 CRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
C ++ Y E GK ++ R + K +P L V + I+ + +N ++ V M
Sbjct: 534 CGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 593
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K ++ L+ ++ + + +++ + M E G A+ L K + GE E
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 352 KADSILLKAQQQNKF--KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQF 408
KA+ IL Q KF +P Y I+ + G++ +++++MR VG +
Sbjct: 654 KAEQIL---NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPNLTTY 710
Query: 409 QTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 460
+TL+ + AK P A + M NV P + +A D ++ VS D
Sbjct: 711 ETLIWGFGEAKQPWKAEELLKEMEEKNVVPTRKTMQLIA--DGWKSIGVSNSND 762
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/238 (18%), Positives = 105/238 (44%), Gaps = 4/238 (1%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + EG +P T L +++ +++ + L+ ++ +
Sbjct: 341 IFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINASS 400
Query: 244 ELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT-WKKLST 299
E G DQ +I+ K+ ES P I+ +GK+ K+EE+ + + M + + +
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPND 460
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ L++ + + + + + ++V +M G + ++ L + + G A+ +++
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIP 520
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
NK KP + I++ Y + G + + F+RM+++G F +L++ ++N
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ +EA ++F + + K S YT L+ K L+ ++ ++G + ++
Sbjct: 334 RPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFN 393
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-R 397
A++ E G +++A I K ++ KP S++ ++ Y K G + + ++ M R
Sbjct: 394 AIINASSESGNLDQAMKIFEKMKESG-CKPTASTFNTLIKGYGKIGKLEESSRLLEMMLR 452
Query: 398 QVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
+ LVQA+ N + A+ I +M++ V P+
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPD 494
>gi|356554749|ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
mitochondrial-like [Glycine max]
Length = 399
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 130/257 (50%), Gaps = 5/257 (1%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + L K+ +GN ++ +++ LR + Y AL++SEW+ +N++ + + DY
Sbjct: 61 PKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSNEEYELSDSDY 120
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A +DL+ ++ G+ AE Y + +P + + Y LL + +KAEE++ R+KD
Sbjct: 121 AVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKDSN 180
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
+ N+++ LY + + +KV V+ ++++ V F+Y + I ++ +
Sbjct: 181 LSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAAILNIDEVR 240
Query: 183 QVVEAMKSEGIEPDSSTQAI-LAKHYVSGGRKEKAEA-MLKEMEGDNLKEHRW-TCRLLL 239
++++ M +S + + LA Y+S + A + L E E + + +W T L+
Sbjct: 241 RILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETE-KRITQRQWITYDFLI 299
Query: 240 PLYAELGKADQVARIWK 256
LY LG D++ +IW
Sbjct: 300 ILYGGLGSKDKLDQIWN 316
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 149/311 (47%), Gaps = 11/311 (3%)
Query: 93 EVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVL 150
E Y LL A C +G ++KAE +F M+ G P ++ N + L K + ++ ++
Sbjct: 183 EDTYALLLKAYCTSGL-LEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIF 241
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+++ + + +Y +LI++ G+++ ++ M+S+ +P+ T L +
Sbjct: 242 QRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFARE 301
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLD 265
G EKAE + ++++ D + + L+ Y+ G A I+ L CE +
Sbjct: 302 GLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASY 361
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
M ++A+G+ E+A+AVF+ M + + K + LL Y+ ++K +D+V ++
Sbjct: 362 NIM--VDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNEL 419
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
ESG ++++ L+ G+ K + + L A + + S+Y ++++ Y + G
Sbjct: 420 HESGLEPDTFVLNSMLNLYGRLGQFGKMEEV-LTAMESGPYATDISTYNILINIYGRAGF 478
Query: 386 IHSTEKIFHRM 396
E +F +
Sbjct: 479 FEKMEGLFQSL 489
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 5/239 (2%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEE+F ++++ G +A N L+ Y R A++ LM+
Sbjct: 292 TALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQH 351
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY I++D G+ V E MK GI P + +L Y G K
Sbjct: 352 MGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAK 411
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIE 272
E ++ E+ L+ + +L LY LG+ ++ + ES P+ + I
Sbjct: 412 CEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNILIN 471
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+G+ E+ E +F+ ++ K +T+ L Y+ K+ +K ++ ++M ++GCH
Sbjct: 472 IYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGCH 530
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 25/311 (8%)
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFS-----YKILIDIKGQSNDL 178
P T + L+ + +L K D++LL+ + + + F + ++ID G+ +
Sbjct: 105 LPATHETWDDLINVVVQLRLNKKWDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKS-- 162
Query: 179 TGMDQVVEAMKSEGIE----PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
+ ++ E E IE P T A+L K Y + G EKAEA+ EM L
Sbjct: 163 --LYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIV 220
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAW-------GKLNKVEEAEAVF 287
+ + G + I++ + D C + E + GK ++ A +F
Sbjct: 221 YNAYIDGLMKAGNPQRAVEIFQRMKR----DCCQPSTETYTLLINLHGKASQSYMALKLF 276
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
M K + YTAL+ +A + K +++ +Q+ E G A++AL++ +
Sbjct: 277 NEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRA 336
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G A I Q +P +SY +++D Y + G + +F M+++G K
Sbjct: 337 GFPYGAAEIF-SLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKS 395
Query: 408 FQTLVQAYINA 418
L+ AY A
Sbjct: 396 HMLLLSAYSKA 406
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 111/254 (43%), Gaps = 26/254 (10%)
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG----GRKEKA 216
T+ +Y +L+ S L + + M+ G+ P AI+ Y+ G G ++A
Sbjct: 182 TEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPS----AIVYNAYIDGLMKAGNPQRA 237
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL--------CESNPWLDVCM 268
+ + M+ D + T LL+ L+ GKA Q KL C+ N +C
Sbjct: 238 VEIFQRMKRDCCQPSTETYTLLINLH---GKASQSYMALKLFNEMRSQKCKPN----ICT 290
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A + A+ + E+AE +F+++ + + Y AL++ Y+ ++ M
Sbjct: 291 YTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQ 350
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
GC +++ +V + GG E A ++ + ++ P S+ML++ Y+K GD+
Sbjct: 351 HMGCEPDRASYNIMVDAYGRGGLHEDAQAVF-EEMKRLGITPTMKSHMLLLSAYSKAGDV 409
Query: 387 HSTEKIFHRMRQVG 400
E I + + + G
Sbjct: 410 AKCEDIVNELHESG 423
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 7/199 (3%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P D ++A+ +E+AEA+F M K S Y A + + ++
Sbjct: 181 PTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEI 240
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
++M C + L+ LH + + A + + + Q K KP +Y +++ +A
Sbjct: 241 FQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQ-KCKPNICTYTALVNAFA 299
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG---IRDRMRADNVFPNK 438
+ G E+IF ++++ G+ + L++AY A P YG I M+ P++
Sbjct: 300 REGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFP-YGAAEIFSLMQHMGCEPDR 358
Query: 439 ALAAQVAQVDAFRKTAVSE 457
A+ VDA+ + + E
Sbjct: 359 --ASYNIMVDAYGRGGLHE 375
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 138/328 (42%), Gaps = 6/328 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLME 154
Y + L NCV ++ A +F R + G + L+ + +L KV DV M+
Sbjct: 148 YNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQ 207
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ +LI G + ++ +++G++PD+ L Y G E
Sbjct: 208 RNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWE 267
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAI 271
+AE L +M + + R L+ Y + G D V +I + +++ + I
Sbjct: 268 EAEKTLSDMLDVGIVDDRPYAALVA-AYGKAGLTDNVNKILETMKASGVEASTTLYNTLI 326
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
K E+A AV + M + YT++++ Y+ +K + ++ +M +G
Sbjct: 327 NIHSKAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQ 386
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
GP+++ L+ + G + A+ IL +A Q K KP Y +++ YA E+
Sbjct: 387 PGPVSYGVLISAYCRAGRLGDAERIL-RAMQNAKCKPTVEIYNMMISGYASAKMRSQAER 445
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAK 419
+F M+ G F TL+ YI ++
Sbjct: 446 MFQTMQDCGLRPDAVTFNTLISMYIKSR 473
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 108/239 (45%), Gaps = 4/239 (1%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y L+ G++ +++++E MK+ G+E ++ L + EKA A+L+ M+
Sbjct: 287 YAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQ 346
Query: 225 GDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVE 281
D + T ++ Y+ + A+ + K P I A+ + ++
Sbjct: 347 ADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLG 406
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+AE + + M K + + Y ++ YA KM S+ + + + M + G + ++ L+
Sbjct: 407 DAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLI 466
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
++++ + ++A+ ++ QQ KP +Y +++ Y + E+I MR+ G
Sbjct: 467 SMYIKSRKRKQAEDCYIRMQQLG-CKPNAVTYKILLKAYTDYNNSIDAERIRLDMRKAG 524
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSY 165
+NV K + MK G ++ N L+ ++ + + +K VL LM+ + + + +Y
Sbjct: 301 DNVNK---ILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITY 357
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+++ ++ + ++ MK GI+P + +L Y GR AE +L+ M+
Sbjct: 358 TSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQN 417
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKL---CESNPWLDVCMAAIEAWGKLNKVEE 282
K +++ YA Q R+++ C P I + K K ++
Sbjct: 418 AKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRKQ 477
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADH 312
AE + RM + K + Y LLK Y D+
Sbjct: 478 AEDCYIRMQQLGCKPNAVTYKILLKAYTDY 507
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 10/171 (5%)
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I+ +GKL + VF RM + K T L+ Y + + + ++
Sbjct: 185 ALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQ 244
Query: 329 GCHIGPLAWDALVKLHVEGG---EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
G +A+ ALV + + G E EK S +L + +P Y ++ Y K G
Sbjct: 245 GLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD-RP----YAALVAAYGKAGL 299
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNV 434
+ KI M+ G A + TL+ + A+ P A + M+AD
Sbjct: 300 TDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGC 350
>gi|298571984|gb|ADI87989.1| PPR protein [Silene latifolia]
Length = 224
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV D++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEDLVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPKIPNWG 186
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVED-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMY 124
>gi|297806979|ref|XP_002871373.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
gi|297317210|gb|EFH47632.1| hypothetical protein ARALYDRAFT_487758 [Arabidopsis lyrata subsp.
lyrata]
Length = 410
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 161/338 (47%), Gaps = 19/338 (5%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + L ++ EGN ++ E+ LR R + AL+++EW+ +++L + DY
Sbjct: 68 PKRSATTVLERWVGEGNQITINELREISKELRRTRRHKHALEVTEWMVQHEELKVSDADY 127
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNR-MKDK 122
AS +DLI+K+ G+ AE Y + + + Y +LL ++AE +F R ++
Sbjct: 128 ASRIDLISKVFGIDAAERYFEGLHIDAKTTETYTSLLHAYAGSKQTERAEALFKRIIETD 187
Query: 123 GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
+ N+++ LY + + +KV +V+ +++ + V F+Y + + + ++ +
Sbjct: 188 SLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTYNLWLSSCAATFNIDEL 247
Query: 182 DQVVEAMKSEGIEPDSSTQAI-LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLL 239
+++E M+ + + + I L Y++ R AE+ ++ + W T L+
Sbjct: 248 RRILEEMRHDASSNEGWVRYINLTSIYINSSRVTNAESTSPVEAEKSISQREWITYDFLM 307
Query: 240 PLYAELGKADQVARIWK-LCESNPWLD----VCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ LG + +IWK L +N L +C+ + ++ L + EAE + + W
Sbjct: 308 ILHTGLGNKVMIDQIWKSLGNTNQKLSSRSYICV--LSSYLMLGHLREAEEIIHQ----W 361
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
K+ T + A A ++L+ +D+ + SG H+
Sbjct: 362 KESKTTEFDA----SACLRILNAFRDVGLEGVASGFHL 395
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 106/267 (39%), Gaps = 37/267 (13%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+++ E +K++ Y ID+ + + ++ E + + ++ T + A Y
Sbjct: 114 MVQHEELKVSDADYASRIDLISKVFGIDAAERYFEGLHIDAKTTETYTSLLHA--YAGSK 171
Query: 212 RKEKAEAMLKEM-EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---------- 260
+ E+AEA+ K + E D+L T ++ LY +G+ ++V + ++ +
Sbjct: 172 QTERAEALFKRIIETDSLSFGAITYNEMMTLYMSVGQVEKVPEVIQVLKHKKVSPDIFTY 231
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRM------SKTWKKLSTKHYTALLKVYADHKM 314
N WL C A ++E + + M ++ W + Y L +Y +
Sbjct: 232 NLWLSSCAATF-------NIDELRRILEEMRHDASSNEGWVR-----YINLTSIYINSSR 279
Query: 315 LSKGKDLVKQMAESGCHIGPLAW---DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
++ + AE I W D L+ LH G D I N+ K
Sbjct: 280 VTNAESTSPVEAEKS--ISQREWITYDFLMILHTGLGNKVMIDQIWKSLGNTNQ-KLSSR 336
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
SY+ ++ Y G + E+I H+ ++
Sbjct: 337 SYICVLSSYLMLGHLREAEEIIHQWKE 363
>gi|302817236|ref|XP_002990294.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
gi|300141856|gb|EFJ08563.1| hypothetical protein SELMODRAFT_131439 [Selaginella moellendorffii]
Length = 1139
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 162/403 (40%), Gaps = 37/403 (9%)
Query: 40 YGKALQLSE---WLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFR-GEVV 95
YG+A ++ E LE + K D E S + L K R KA + ++ ESF
Sbjct: 666 YGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKATLLLHRVLESFTLDSAA 725
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK 155
Y L N + V AE + +RM+DKGF V L+ Y + + +V L K
Sbjct: 726 YNQLTINFLKAGQVLPAEMLHSRMQDKGFDVEDSTLGHLIAAYGKAGRYEVLTRL----K 781
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ F Y ++ N L +VE M+ G++ DS +IL Y G
Sbjct: 782 PELPRNNFVYSSMVGALINCNQLEEAAGLVEKMRQIGLKCDSVLVSILLNAYSKAG---- 837
Query: 216 AEAMLKEMEGDNLKEHRW----TCRLL---LPLYAELGKAD-QVARIWKLCES------- 260
E + G RW C L + Y + KAD + R+ K ++
Sbjct: 838 -EQKIFSFSG------RWYPAGYCCLQHDHIVAYNTIIKADLRPGRLKKAIDTYSSLTNL 890
Query: 261 --NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P L I + K + +AE +FK + + K Y+ ++ YA M
Sbjct: 891 GLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHA 950
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
DL + M G ++++ L+ + G+ KA+ +L++ + P +++L++
Sbjct: 951 ADLFEAMKLRGLRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAG-CPPSSVTFLLLIS 1009
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
YA RG + E RM+ + + ++ A+ A+ P
Sbjct: 1010 AYAHRGKCNEAENALERMQTAAIRPTVRHYNEVMLAFSRARLP 1052
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 154/356 (43%), Gaps = 18/356 (5%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLL 151
EV + T++ N + ++ M +G +S +LI L+K +++AD L
Sbjct: 307 EVAFSTMILNYANAEMFDEMLTMYEAMMSRGIVPSSVTYTTMLI---HLNKAERLADAAL 363
Query: 152 LME---KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
L E +E+V+L+ +Y ++I I + +V EAM G PDS ++
Sbjct: 364 LWEDLVEESVELSPLAYALMITIYRKLGRFEEALEVFEAMLGAGYYPDSLIYNMVLHMLG 423
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPW 263
GR ++A + M+ L +++ +L + + K + A I+ K C +
Sbjct: 424 KLGRYDEAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEV 483
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
V + I +GK +EAE +F+ M++ + K ++ + V ++ +++
Sbjct: 484 --VYTSVISIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVME 541
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
++ G ++ +AW L+ +V+ G VE+A + M +Y ++ YA+
Sbjct: 542 ELLAKGLNLDDMAWKTLLHCYVKAGNVERATKTFKTLVESGIADLM--AYNDVLSLYAEF 599
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG--IRDRMRADNVFPN 437
+ + +F +++ F T+V+ Y NA A + +MR P+
Sbjct: 600 DMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPD 655
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/317 (17%), Positives = 120/317 (37%), Gaps = 42/317 (13%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
PE R VY +++ + N +++A + +M+ G S + LL Y + ++K+
Sbjct: 782 PELPRNNFVYSSMVGALINCNQLEEAAGLVEKMRQIGLKCDSVLVSILLNAYSKAGEQKI 841
Query: 147 ---------------------------------------ADVLLLMEKENVKLTQFSYKI 167
D + ++ + +Y
Sbjct: 842 FSFSGRWYPAGYCCLQHDHIVAYNTIIKADLRPGRLKKAIDTYSSLTNLGLRPSLQTYDT 901
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+I + +S +++ + +KS G +PD + + Y G E A + + M+
Sbjct: 902 MISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNCYAKSGMYEHAADLFEAMKLRG 961
Query: 228 LKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAE 284
L+ H + L+ YA G KA+Q+ P + I A+ K EAE
Sbjct: 962 LRPHEVSYNNLIDAYARAGQFAKAEQLLVEMAKAGCPPSSVTFLLLISAYAHRGKCNEAE 1021
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+RM + + +HY ++ ++ ++ + + +M SG ++ ++++
Sbjct: 1022 NALERMQTAAIRPTVRHYNEVMLAFSRARLPRQAMESYLKMERSGIQPDVVSSRTMIRIL 1081
Query: 345 VEGGEVEKADSILLKAQ 361
+EG E+ S+ K +
Sbjct: 1082 LEGSMFEEGLSLYKKTE 1098
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 124/253 (49%), Gaps = 9/253 (3%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILI 169
+A +VF M+ + + ++ +L + ++ DK ++A + M+ + + + Y +I
Sbjct: 430 EAVDVFTAMQRQELCTSKYSYATMLHICEKADKFELAASIFSDMQMKRCPVDEVVYTSVI 489
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM--EGDN 227
I G++ +++ + M + D T +++A + G+ +A +++E+ +G N
Sbjct: 490 SIYGKAGLYDEAEKLFQEMNELRLLVDVKTFSVMANVRLKAGKYNEAVQVMEELLAKGLN 549
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA---AIEAWGKLNKVEEAE 284
L + W + LL Y + G ++ + +K + D+ MA + + + + +E+A+
Sbjct: 550 LDDMAW--KTLLHCYVKAGNVERATKTFKTLVESGIADL-MAYNDVLSLYAEFDMLEDAK 606
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+F+++ + + + ++K+Y + M++ +++++QM E G + L+ +
Sbjct: 607 LLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMREKGFTPDHITQGILINAY 666
Query: 345 VEGGEVEKADSIL 357
E +E+A +L
Sbjct: 667 GEANRIEEAAGLL 679
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 153/369 (41%), Gaps = 18/369 (4%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y L L A+ L+ A+ Q++ S +V + T++ N V AEEV +M+
Sbjct: 589 YNDVLSLYAEFDMLEDAKLLFQQLKSSSIQPDQVWFGTMVKLYCNANMVAAAEEVLRQMR 648
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+KGF L+ Y ++ ++ A +L KE+ +I + +K + D
Sbjct: 649 EKGFTPDHITQGILINAYGEANRIEEAAGLLEASAKEDESEAAAISRIYLCLKFRLFDKA 708
Query: 180 GM--DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ +V+E+ DS+ L +++ G+ AE + M+ T
Sbjct: 709 TLLLHRVLESFTL-----DSAAYNQLTINFLKAGQVLPAEMLHSRMQDKGFDVEDSTLGH 763
Query: 238 LLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
L+ Y + G+ + + R+ N ++ M + A N++EEA + ++M + K
Sbjct: 764 LIAAYGKAGRYEVLTRLKPELPRNNFVYSSM--VGALINCNQLEEAAGLVEKMRQIGLKC 821
Query: 298 STKHYTALLKVYA---DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ + LL Y+ + K+ S H +A++ ++K + G ++KA
Sbjct: 822 DSVLVSILLNAYSKAGEQKIFSFSGRWYPAGYCCLQHDHIVAYNTIIKADLRPGRLKKAI 881
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ +P +Y ++ +AK G EK+F ++ G+ K + ++
Sbjct: 882 DTY-SSLTNLGLRPSLQTYDTMISVFAKSGRTRDAEKMFKDLKSAGFQPDEKVYSQMMNC 940
Query: 415 YINAKTPAY 423
Y AK+ Y
Sbjct: 941 Y--AKSGMY 947
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 160/360 (44%), Gaps = 29/360 (8%)
Query: 76 LQKAESYIQKIPE-SFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFAC 131
+ +AES ++++ E + +Y T++ N +K VF R+K+ GF V S+ C
Sbjct: 394 MDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGC 453
Query: 132 NQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
L+ +Y ++ K K +V +ME +K +Y +LI+ + D T V E +
Sbjct: 454 --LINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIK 511
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
+G++PD + K + G ++A M+KEM+ K HR T R +P+ +A +
Sbjct: 512 DGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQK---KRHRPTSRTFMPIIHGFARAGE 568
Query: 251 VARIWKLCESNPWLDV-----CMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLS 298
+ R ++ D+ C+ + + L ++E+A + M+
Sbjct: 569 MRRALEI------FDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPD 622
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
YT ++ YA K + ++ G + ++AL+K + G ++ A ++
Sbjct: 623 EHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTR 682
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ QN + F Y +++D +A+RGD+ + +M+Q G + + + A A
Sbjct: 683 EMSAQNIPRNTF-VYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKA 741
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 14/318 (4%)
Query: 134 LLILY--KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L++ Y +R D + M + + Y LI D+ V MK E
Sbjct: 307 LMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEE 366
Query: 192 GIEPDSSTQAILAKHYVSGGRKE------KAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
G+E T +I+ + G + +AE++++EME + + ++ Y +
Sbjct: 367 GVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMI 426
Query: 246 GKADQVARIWKL---CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
G ++ ++K C P + I + K+ KV +A V K M K + K Y
Sbjct: 427 GNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTY 486
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
+ L+ + K + + + + + G + ++ ++K G +++A ++K Q
Sbjct: 487 SMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIH-MVKEMQ 545
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT-- 420
+ + +P ++M I+ +A+ G++ +IF MR+ G + F LV + +
Sbjct: 546 KKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQME 605
Query: 421 PAYGIRDRMRADNVFPNK 438
A I D M V P++
Sbjct: 606 KAVEILDEMALAGVSPDE 623
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLL 151
E Y T++ A + KA E F +++++G + F LL + + + A V
Sbjct: 623 EHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTR 682
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M +N+ F Y ILID + D+ +++ MK EG++PD T G
Sbjct: 683 EMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAG 742
Query: 212 RKEKAEAMLKEMEGDNLKE---------HRWTC 235
+A ++EME +K H W C
Sbjct: 743 DMLRATKTIQEMEALGVKPNVKTYTTLIHGWAC 775
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 102/249 (40%), Gaps = 14/249 (5%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEV-VYRTLLANCVAGNNVKKAEEVFN 117
E Y + ++ A L KA Y K+ E +V Y LL C ++ A V
Sbjct: 623 EHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTR 682
Query: 118 RMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M + P +F N L+ + +R D + AD++ M++E V+ +Y I+ ++
Sbjct: 683 EMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAG 742
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D+ + ++ M++ G++P+ T L + EKA +EM+ LK +
Sbjct: 743 DMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYH 802
Query: 237 LLLPLY---AELGKADQVARIWKLCES--NPWLDVCMAAIEAWGK-LNKVEE-----AEA 285
L+ A + +A + I +C L V M W K L K+E EA
Sbjct: 803 CLMTSLLSRATVAEAYIYSGILSICREMIESELTVDMGTAVYWSKCLRKIEGTGGELTEA 862
Query: 286 VFKRMSKTW 294
+ K W
Sbjct: 863 LQKTFPPDW 871
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 95/225 (42%), Gaps = 4/225 (1%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKI 167
+++A E+F+ M+ G T N L++ L ++ +K ++L M V + +Y
Sbjct: 569 MRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTT 628
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+++ D + +++EG+E D T L K GR + A A+ +EM N
Sbjct: 629 IMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQN 688
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAE 284
+ + + +L+ +A G + A + + + P + + I A K + A
Sbjct: 689 IPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRAT 748
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ M K + K YT L+ +A + K ++M +G
Sbjct: 749 KTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAG 793
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 11/323 (3%)
Query: 85 KIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK 144
KI S E Y L+ V++A F+ M ++G N L+ ++++ +
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186
Query: 145 KVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+A L M++ + + +Y IL+D + + ++ M +G PDS T + L
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--- 260
GR E+A + +EM + LL A L KA + R+WKL +
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL---ATLAKAGNMDRVWKLMKEMSR 303
Query: 261 ---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
+P ++A GK NK + A VF RM ++ K Y L+ YA ++
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQ 363
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ ++++M E+G +++L+ G+V++A ++ L+ + +P +Y +M
Sbjct: 364 ARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAV-LEEMETAGCRPDVVTYNRLM 422
Query: 378 DQYAKRGDIHSTEKIFHRMRQVG 400
D KRG+ ++F +M+ G
Sbjct: 423 DMLGKRGENQRAARLFQQMKDKG 445
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 142/347 (40%), Gaps = 40/347 (11%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFS 164
GN A ++FN+ + T A +L+ IL + ++ V + ++ +L +F+
Sbjct: 43 GNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFA 102
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +LI G+S L ++ MK +G EPD T L GR ++A + M
Sbjct: 103 YNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAML 162
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW----------KLCESNPWLD-VCMAA--- 270
L + T LL+ + ++G+ D ++ + N LD +C A
Sbjct: 163 ERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVG 222
Query: 271 ------------------------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+ GK +VEEA VF+ M + +Y +LL
Sbjct: 223 AARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
A + + L+K+M+ G H +++ ++ + + + A + + ++
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR-MVESGC 341
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
KP SY +++D YA+ GD ++ M + G++ K + +L+
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIH 388
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 4/218 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +LLA N+ + ++ M KGF +F+ N ++ + +K A +V
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + K SY ILID + D Q++E M G P++ T L + G+
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
++A A+L+EME + T L+ + + G+ + AR+++ + P
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAV 455
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
I+ ++++EA +FK M + Y L++
Sbjct: 456 RIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIR 493
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 8/189 (4%)
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ + +WG L+ +E + K M + L L+ Y DL Q
Sbjct: 2 LVVLASWGILDPLE---TLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAES 58
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
C A+ L+ + V GE E+A+ + K Q+ F +Y +++ + + G +
Sbjct: 59 FACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRF-AYNVLIRYFGRSGQLD 117
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVA 445
S ++F M+ G + LV A A A D M + PN +
Sbjct: 118 SAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPN--IPTYNL 175
Query: 446 QVDAFRKTA 454
+DAFRK
Sbjct: 176 LMDAFRKVG 184
>gi|298571988|gb|ADI87991.1| PPR protein [Silene latifolia]
Length = 224
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPKIPNWG 186
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 159/374 (42%), Gaps = 12/374 (3%)
Query: 40 YGKALQLSEWLET---NKKLDFIERDYASCLDLIAKLRG--LQKAESYIQKIPES--FRG 92
YG+ Q +E T KK + + + + + A RG L++AE + ++ ES G
Sbjct: 111 YGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPG 170
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL- 151
V Y T L + + AE+VF M+++G P ++ +Y + A+ L
Sbjct: 171 LVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQ 230
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M K + F+Y LI+ + + +++ ++S G PD T L + Y GG
Sbjct: 231 SMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGG 290
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCM 268
A+ + + M +K + +L+ + G I+ K P + +
Sbjct: 291 HPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHI 350
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ A+ K +V +AE +R+ + T + +LL Y + + K + L + M S
Sbjct: 351 LLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGS 410
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
C + + L+ ++ +GG +E+A+ I + + F P S+ +M Y+KR
Sbjct: 411 VCKPDIITLNTLINVYAQGGYIERAEEI-FNSLESKGFTPDVMSWTSLMGAYSKRKLYRK 469
Query: 389 TEKIFHRMRQVGYV 402
++ +M G +
Sbjct: 470 CVSVYQKMLIAGCI 483
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 6/278 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
+ +L+D G++ T + MK P ++ +L Y GG+ E+AE +L EM+
Sbjct: 104 FNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAERVLHEMK 163
Query: 225 GDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVE 281
N T L + + G A+ V R + P ++ I +GK +
Sbjct: 164 ESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSA 223
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+AE +F+ M K S YTAL+ +A + +++ ++ G ++AL+
Sbjct: 224 KAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALL 283
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ + GG A + + + K SY +++D + + G I + I+ M++VG+
Sbjct: 284 EAYSRGGHPAGAKEV-FETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGF 342
Query: 402 VARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
K L+ A++ A T A R+ + V P+
Sbjct: 343 KPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPD 380
>gi|298571976|gb|ADI87985.1| PPR protein [Silene latifolia]
gi|298571992|gb|ADI87993.1| PPR protein [Silene latifolia]
gi|298572000|gb|ADI87997.1| PPR protein [Silene latifolia]
gi|298572064|gb|ADI88029.1| PPR protein [Silene latifolia]
Length = 224
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|298572018|gb|ADI88006.1| PPR protein [Silene latifolia]
Length = 224
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 167/397 (42%), Gaps = 24/397 (6%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y C+D K + A + ++ P+ +V Y +++ + +AEE+F
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPD----DVSYTSMIWVLCKAGRLSEAEELF 310
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQF-SYKILIDIKGQS 175
+M+ + ++A N +++ Y + + A LL KE + S+ ++ G+
Sbjct: 311 GQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKK 370
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
+ + EAMK + EP+SST I+ G+ E+A + EME L + T
Sbjct: 371 RKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTV 429
Query: 236 RLLLPLYAELGKADQVARIWKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
+++ L KA + +++ E+ NP + I+ GK V++A +F+
Sbjct: 430 NIMVD---RLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFEN 486
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
M T + YT+L++ + H G + K+M GC + + + G+
Sbjct: 487 MLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGD 546
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
VEK +I + F P SY +++ K G T IFH M+Q G+ + +
Sbjct: 547 VEKGRAIFEDIKGYG-FLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYN 605
Query: 410 TLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQV 444
+V + + AY + + M+ V P A +
Sbjct: 606 AVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSI 642
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 155/377 (41%), Gaps = 23/377 (6%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLL 152
VVY +L+ N + ++F M +G P + + ++K D +K +
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIF-- 554
Query: 153 MEKENVKLTQF-----SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
E++K F SY ILI ++ + AMK +G D+ + +
Sbjct: 555 ---EDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGF 611
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDV 266
G+ +KA +L+EM+ + T ++ A++ + D+ +++ +S L+V
Sbjct: 612 CKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNV 671
Query: 267 CM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT--ALLKVYADHKMLSKGKDLV 322
+ + I+ +GK+ +++EA + + M K K L+ YT +L+ + +++
Sbjct: 672 IVYSSLIDGFGKVGRIDEAYLILEEMMK--KGLTPNVYTWNSLMDALVKAEEINEALICF 729
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+ M E C + L+ + KA + + Q+ P +Y ++ AK
Sbjct: 730 QSMKEMKCSPNTYTYSILINGLCRVQKYNKA-FVFWQEMQKQGLVPNVVTYTTMIAGLAK 788
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ--AYINAKTPAYGIRDRMRADNVFPNKAL 440
G+I +F R + G F L++ ++ N AY + + R N +
Sbjct: 789 VGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRIN--V 846
Query: 441 AAQVAQVDAFRKTAVSE 457
A ++ +DA K E
Sbjct: 847 KACISLLDALNKAECLE 863
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
NP C + A + ++++AE V M + + + YT L+ A+ + + +
Sbjct: 147 NP---ACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALE 203
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L++QM E G +G + LV+ G VE A + L+ + + +P Y + +D +
Sbjct: 204 LLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALA-LVDEVKGSCLEPDIVLYNVCIDCF 262
Query: 381 AKRGDIHSTEKIFHRMRQVG 400
K G++ K FH ++ G
Sbjct: 263 GKAGNVDMAWKFFHELKSQG 282
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 101/264 (38%), Gaps = 13/264 (4%)
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
++V+ AM+ P S +L + E+A +L++M+ + L L
Sbjct: 167 ERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG---YEVGVPLFTTL 223
Query: 242 YAELGKADQVARIWKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
L + +V L + P + + I+ +GK V+ A F +
Sbjct: 224 VRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGL 283
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K YT+++ V LS+ ++L QM A++ ++ + G+ E A
Sbjct: 284 KPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYK 343
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+L + +++ P S+ I+ K+ + +F M++ + ++
Sbjct: 344 LLDQLKERGCI-PSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAE-PNSSTYNIIIDML 401
Query: 416 INAK--TPAYGIRDRMRADNVFPN 437
A AY IRD M +FPN
Sbjct: 402 CMAGKVEEAYMIRDEMEHAGLFPN 425
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
L Y A+L + H + + K ++++M+ G + A LV V ++ A+ +
Sbjct: 112 LPADAYNAVLP-FLSHDLAAMEK-VLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERV 169
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ A ++ KF+P FS+Y +++ A+ ++ +M++VGY F TLV+A
Sbjct: 170 I-AAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRA 226
>gi|298572036|gb|ADI88015.1| PPR protein [Silene latifolia]
Length = 224
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMY 124
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 172/380 (45%), Gaps = 17/380 (4%)
Query: 26 EIALAMANLRTRRMYGKALQLSEWL--ETNKKLDFIERDYASCLDLIAKLRGLQKAESYI 83
+I LR + +G + + EW+ ++ + D I Y +D + + ES
Sbjct: 121 DIISVAVQLRLNKKWGPIILICEWIMNKSTFRPDVIV--YNLLMDAYGQRSLYKDVESTY 178
Query: 84 QKIPES--FRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYK 139
++ ES E Y LL A C +G ++KAE VF M+ G ++ N + L K
Sbjct: 179 LELLESHCIPTEDTYALLLKAYCKSGL-LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVK 237
Query: 140 RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
+ K ++ M+++ + T +Y +LI++ G+ + + + M+++ +P+ T
Sbjct: 238 GGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICT 297
Query: 200 QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-- 257
L G EKAE + ++M+ + + L+ Y+ G A I+ L
Sbjct: 298 FTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQ 357
Query: 258 ---CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
CE + M ++A+G+ E+A+AVF+ M + + K + LL Y+
Sbjct: 358 HMGCEPDRASYNIM--VDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGN 415
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
++K +D++ QM +SG ++++ L+ G+ K + L Q+ + S+Y
Sbjct: 416 VAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMED-LFSTMQKGPCRADISTYN 474
Query: 375 LIMDQYAKRGDIHSTEKIFH 394
++++ Y + G + E++F
Sbjct: 475 ILINVYGRAGFVERMEELFQ 494
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 13/243 (5%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N +A + +KAEE+F +M++ G+ +A N L+ Y R A++ LM+
Sbjct: 299 TALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQH 358
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY I++D G++ V E MK GI P + +L Y S G K
Sbjct: 359 MGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAK 418
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG 275
E ++ +M LK + +L LY LG+ ++ ++ + P C A I +
Sbjct: 419 CEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGP----CRADISTYN 474
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKH-------YTALLKVYADHKMLSKGKDLVKQMAES 328
L V +RM + ++ L K+ +T+ + Y+ K+ + +L ++M ++
Sbjct: 475 ILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDA 534
Query: 329 GCH 331
GC+
Sbjct: 535 GCY 537
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 9/290 (3%)
Query: 140 RLDKKKVADVLL---LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV-VEAMKSEGIEP 195
RL+KK +L+ +M K + Y +L+D GQ + ++ +E ++S I P
Sbjct: 130 RLNKKWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCI-P 188
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVA 252
T A+L K Y G EKAEA+ EM L + + G KA ++
Sbjct: 189 TEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIF 248
Query: 253 RIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADH 312
K P D I +GK +K A+ +F M K + +TAL+ A
Sbjct: 249 HRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALARE 308
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
+ K +++ +QM E+G A++AL++ + G A I Q +P +S
Sbjct: 309 GLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIF-SLMQHMGCEPDRAS 367
Query: 373 YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPA 422
Y +++D Y + G + +F M+++G K L+ AY +A A
Sbjct: 368 YNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVA 417
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 7/199 (3%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P D ++A+ K +E+AEAVF M K S Y A + K ++
Sbjct: 188 PTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEI 247
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+M GC + L+ ++ + + A +I + + Q + KP ++ +++ A
Sbjct: 248 FHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQ-RCKPNICTFTALVNALA 306
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG---IRDRMRADNVFPNK 438
+ G E+IF +M++ GY + L+++Y A P YG I M+ P++
Sbjct: 307 REGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFP-YGAAEIFSLMQHMGCEPDR 365
Query: 439 ALAAQVAQVDAFRKTAVSE 457
A+ VDA+ + + E
Sbjct: 366 --ASYNIMVDAYGRAGLHE 382
>gi|125532538|gb|EAY79103.1| hypothetical protein OsI_34209 [Oryza sativa Indica Group]
Length = 479
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 180/435 (41%), Gaps = 68/435 (15%)
Query: 4 PDISIHSTLTKYA-EEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
P + + L ++ E +++ EI + L RR + +ALQLS W+ L D
Sbjct: 94 PRLPLSPVLEQWCLAEERPIAKPEIQSIIKYLCRRRRFSQALQLSMWMTERLHLHLSPGD 153
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
A+ L+LI K+ GL +A Y +P+ + + Y +LL N V+KAEE+F +M+
Sbjct: 154 VANRLELITKVHGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGM 213
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
G +S+A N ++ LY + GQ + M
Sbjct: 214 GM-ASSYAYNVMMRLYLQ-------------------------------NGQVERVHSMH 241
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
Q AM+ GI PD ST L V+ RK+K L
Sbjct: 242 Q---AMEESGIVPDVSTTHTL----VAVLRKKKT------------------------LV 270
Query: 243 AELGKADQVARIWKLCE-SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
A A+ + I + E +N + M I K+N + AE ++ ++
Sbjct: 271 AAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRL 330
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK-- 359
L+ Y ++ K + LV Q + G L + + G+V KA + K
Sbjct: 331 INLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKAL 390
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
A N++ P ++ ++ ++ +A++ ++ + E++ ++++ R + L++ Y+NA
Sbjct: 391 ASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMASLLQRLITPTR-DIYHGLLKTYVNAG 449
Query: 420 TPAYGIRDRMRADNV 434
P + DRM+ D +
Sbjct: 450 KPVSDLLDRMKKDGM 464
>gi|298572016|gb|ADI88005.1| PPR protein [Silene latifolia]
Length = 224
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVK-KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK- 143
+P++ + +Y LL N G ++ KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALL-NAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDEL 59
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAI 202
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T +
Sbjct: 60 DKVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFST 119
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
+A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 120 MASMYAKSGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS-- 177
Query: 263 WLDVCMAAIEAWG 275
I WG
Sbjct: 178 ----VFPNIPNWG 186
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYGGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 163/388 (42%), Gaps = 8/388 (2%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYR 97
+ + Q+ EW+ Y +D K ++ AE ++ E+ E +
Sbjct: 84 WPRVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFG 143
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKE 156
L+ + +KAEE+F +M+ +G+ ACN L + + + + A+ L +EK
Sbjct: 144 VLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKY 203
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+ +Y +I I G++ + + + + +M+ P+ T L + G +A
Sbjct: 204 ECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREA 263
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA---IEA 273
E +++ + K + L+ Y++ G I++ + N ++ I A
Sbjct: 264 ERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINA 323
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ E+AE +FK M + K LL YA + + ++LV M G
Sbjct: 324 YGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPD 383
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQN--KFKPMFSSYMLIMDQYAKRGDIHSTEK 391
L ++AL+ + G E +++L K + + + KP +Y ++ YA+ G I E+
Sbjct: 384 TLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEE 443
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAK 419
+F + ++ V + L+ Y K
Sbjct: 444 LFQGLARLKLVPDATTWTALMGGYAKKK 471
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 8/241 (3%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEK 155
T L N A + ++AE F+++++ + +A N L+ Y + A ++ M++
Sbjct: 248 TALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQR 307
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
S+ ILI+ G++ +++ ++M+S G P+ + +L Y GR E+
Sbjct: 308 NGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEE 367
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESN-----PWLDVCMA 269
AE ++ ME D K L+ Y G+ D A + K+ +S+ P +
Sbjct: 368 AEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNT 427
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + + + +AE +F+ +++ +TAL+ YA K+ K ++K+M ESG
Sbjct: 428 LIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESG 487
Query: 330 C 330
C
Sbjct: 488 C 488
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 7/256 (2%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILI 169
KAE ++ M+ P L+ + R + A+ +++ + K ++Y L+
Sbjct: 227 KAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALM 286
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
+ Q G ++ + M+ G PD+ + IL Y G E AE + K M+
Sbjct: 287 EAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFS 346
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + LLL YA G+ ++ + E + P + A I A+G + E+ EA+
Sbjct: 347 PNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEAL 406
Query: 287 FKRMSKTWKKLSTKH---YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+M K+ K + Y L++VYA + K ++L + +A W AL+
Sbjct: 407 LAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGG 466
Query: 344 HVEGGEVEKADSILLK 359
+ + K SIL K
Sbjct: 467 YAKKKLYRKCTSILKK 482
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 253 RIWKLCE-------SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
R+ ++CE P L I+A+GK +E+AE F RM + + + + L
Sbjct: 86 RVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVL 145
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLA----------------------------- 336
+ Y K ++L QM + G GPLA
Sbjct: 146 INGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYEC 205
Query: 337 ------WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
++ ++ ++ + GE KA+ +L ++ ++ P ++ +M+ +A++G E
Sbjct: 206 EPNIDTYNRMIVIYGKAGEPSKAE-MLYRSMRRAMCPPNICTFTALMNAFARQGLYREAE 264
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG--IRDRMRADNVFPN 437
+ F ++++ Y + L++AY +PA I M+ + FP+
Sbjct: 265 RYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPD 313
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 141/310 (45%), Gaps = 11/310 (3%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVLLLMEKENVKLTQFSYKILIDIK 172
VF+ ++ GF N LL ++ + LD + V+ V M+K + +Y LI
Sbjct: 405 VFDELRSAGFVPDIVTWNTLLAVFGQNGLDSE-VSGVFKEMKKAGYIPERDTYVSLISSY 463
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ Q+ + M GI PD ST + GGR E+AE + EME + K
Sbjct: 464 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 233 WTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
++ LL YA + D++ + + E + WL + + + K+N + EAE F
Sbjct: 524 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNS--KVNNLAEAEKAF 581
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ + L A++ +Y ++M+ K + ++ M ES ++ +++L+ ++
Sbjct: 582 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 641
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+ EK ++IL + + +P SY ++ Y ++G + ++F M+ G
Sbjct: 642 GDCEKCENILTEIKSSG-VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVT 700
Query: 408 FQTLVQAYIN 417
+ V++Y++
Sbjct: 701 YNIFVKSYVS 710
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 148/359 (41%), Gaps = 8/359 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
R A+ + ++A+ L +A + + P G Y L++ + A VF RM
Sbjct: 142 RVLATAIRVMARAGRLAEASALLDAAPGPDAG--AYTALVSAFSRAGRFRDAVAVFRRMV 199
Query: 121 DKGFPVTSFACNQLLILYKRLDK--KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
D G N +L +Y ++ K+V +++ M++ V +++Y LI +
Sbjct: 200 DSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALY 259
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
QV + MK+ G EPD T L Y R ++A +++EME T L
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319
Query: 239 LPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ Y + G +Q + + E P + I + K++ A + M +
Sbjct: 320 ISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGC 379
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K + Y AL+K++ + + ++ +G + W+ L+ + + G ++ S
Sbjct: 380 KPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNG-LDSEVS 438
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ K ++ + P +Y+ ++ Y++ G +I+ RM + G + ++ A
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 5/291 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL++ C K+A +VF+ MK GF N LL +Y + + A +V+ M
Sbjct: 245 TYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM 304
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E+ + +Y LI + L + + M+ +GI+PD T L G+
Sbjct: 305 ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKI 364
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM--AA 270
+ A EM + K + T L+ ++ GK ++ ++ S ++ D+
Sbjct: 365 DAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTL 424
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ +G+ E VFK M K Y +L+ Y+ + + K+M E+G
Sbjct: 425 LAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI 484
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ ++A++ GG E+A+ + + ++++ KP SY ++ YA
Sbjct: 485 YPDVSTYNAVLSALARGGRWEQAEKLFAEMEERD-CKPDEYSYSSLLHAYA 534
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 104 VAGNN--VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKL 160
+ G N V+K E++ + MK+ +++ N L+ +Y RL D +K ++L ++ V+
Sbjct: 602 IYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRP 661
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
++SY +I G+ + ++ MK G++PD T I K YVS E+A ++
Sbjct: 662 DRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELV 721
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGK 247
+ M K + T ++ Y GK
Sbjct: 722 RYMVTQGCKPNERTYNSIVEGYCRNGK 748
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 23/207 (11%)
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC--MAAIEAWGKLN 278
+E+ G+ + H R+L + +A ++A L ++ P D A + A+ +
Sbjct: 130 RELHGEGVLHHP---RVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAG 186
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK---DLVKQMAESGCHIGPL 335
+ +A AVF+RM + + + Y +L VY+ KM K +LV M E G
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYS--KMAVPWKEVVELVASMKEHGVAPDRY 244
Query: 336 AWDALVK------LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
++ L+ L+ E +V + + F+P ++ ++D Y K
Sbjct: 245 TYNTLISCCRRRALYKEAAQV-------FDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 297
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYI 416
++ M +VG + +L+ +Y+
Sbjct: 298 IEVIQEMERVGCPPSVVTYNSLISSYV 324
>gi|298572960|gb|ADI88477.1| PPR protein [Silene vulgaris]
Length = 224
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL VA KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ ++L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R L+ LY LG +V R+W + +S
Sbjct: 121 AAMYSKLGQLEKAEQCLRNLETRITNRDRMPYHYLISLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVAAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA-RFKQFQTLVQAY 415
+Q K + SY + + +G S E++F M +A + F T+ Y
Sbjct: 70 KQKKIQLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIAPNWTTFSTMAAMY 124
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 145/329 (44%), Gaps = 9/329 (2%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFAC-NQLLILYKRLDKKKVAD 148
G V Y L+A ++ +A + + MK G V +++C LI +LD+
Sbjct: 253 GVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE--ACQ 310
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
VL MEKE +Y LI+ G++ L ++ + MKS+G PD T + L
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLD 265
R E A + +EME ++ +T ++ + + G+ D R++ +P +
Sbjct: 371 KAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI 430
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
A + + G+ + +EA +F+ M ++ Y ALL + K + L+K++
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E GC L +D +++ G V++A +L A + + P SSY ++D AK G
Sbjct: 491 IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLW-PGASSYNALIDALAKAGR 549
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ +++ G + +L+ A
Sbjct: 550 VSEAFNTLEDLKEQGGKPDIVSYSSLISA 578
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 128/315 (40%), Gaps = 15/315 (4%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y L++ + +A +F M+++G +F N L+ ++ + +K ++L M
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E+ +Y LI G+ + ++ + MK G +PDS T L GR
Sbjct: 176 ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRV 235
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL--------CESNPWLD 265
+ A +L EM+ +K T L+ A GK + + L C+ +
Sbjct: 236 DDALELLDEMKERGVKPGVVTYNALI---AGFGKVGDLVEAYNLLDEMKRNGCKPDVVTY 292
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
C+ I K ++++EA V K+M K T Y L+ +L+ L +M
Sbjct: 293 SCL--ITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRM 350
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
GC+ + + L+ + VE A +L + + +P +Y I+ K G
Sbjct: 351 KSKGCNPDVVTYSTLITALGKAARVESA-CVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409
Query: 386 IHSTEKIFHRMRQVG 400
+ +++F MR G
Sbjct: 410 VDDADRLFSEMRGKG 424
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 150/352 (42%), Gaps = 11/352 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKD-KGFP-VTSFACNQLLILYKRLDKKKVA-DVL 150
V Y +LL ++A+ +F +K K P V S++C L+ R K + A +V+
Sbjct: 10 VTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSC--LINSLGRAGKWEAALEVV 67
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ + K ++Y L+D G++ +++ M+ G PD T L
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVC 267
GR +A + EM +T L+ ++G++ + + + E + P +
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ I GK + +A +F+ M + +K + +TAL+ + +L+ +M E
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G G + ++AL+ + G++ +A + LL ++N KP +Y ++ K +
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYN-LLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
++ +M + G + TL+ A A + DRM++ P+
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPD 358
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 24/278 (8%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-----DKKKVAD 148
+ Y TL+ + A +F+RMK KG CN ++ Y L +V
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKG-------CNPDVVTYSTLITALGKAARVES 377
Query: 149 VLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
+L ME ++ F+Y +I + G++ + D++ M+ +G+ PD T
Sbjct: 378 ACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLN 437
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWL 264
GGR ++A + ++M+ L T LL ++ + D + K L E
Sbjct: 438 SLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAF 497
Query: 265 DV-----CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
D C+ + +WG +++ E F W S+ Y AL+ A +S+
Sbjct: 498 DSLKFDECLEILTSWGNVDEAHEL-LQFANSKGLWPGASS--YNALIDALAKAGRVSEAF 554
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ ++ + E G +++ +L+ + G+++ A +L
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELL 592
>gi|298572060|gb|ADI88027.1| PPR protein [Silene latifolia]
Length = 224
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGKLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPKIPNWG 186
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 179/410 (43%), Gaps = 31/410 (7%)
Query: 60 ERDYASCLDLIAKL--RGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFN 117
++ + S L LI+K+ GL+ P++ +++ ++ N+ +A ++F
Sbjct: 390 QKHFHSLLSLISKVEKNGLK---------PDT----ILFNAIINASSESGNLDQAMKIFE 436
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQS 175
+MK+ G T+ N L+ Y ++ K + + LL ++ E ++ + IL+
Sbjct: 437 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQ 496
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML-KEMEGDNLKEHRWT 234
+ +V M+S G++PD T LAK Y G AE M+ M + +K + T
Sbjct: 497 RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRT 556
Query: 235 CRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
C ++ Y E GK ++ R + K +P L V + I+ + +N ++ V M
Sbjct: 557 CGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 616
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K ++ L+ ++ + + +++ M E G A+ L K + GE E
Sbjct: 617 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPE 676
Query: 352 KADSILLKAQQQNKF--KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ-VGYVARFKQF 408
KA+ IL Q KF +P Y I+ + G++ +++ +M VG +
Sbjct: 677 KAEQIL---NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 733
Query: 409 QTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVS 456
+TL+ + AK P A + M NV P + +A D ++ VS
Sbjct: 734 ETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIA--DGWKSIGVS 781
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 104/238 (43%), Gaps = 4/238 (1%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + EG +P T L +++ ++E + LK ++ +
Sbjct: 364 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 423
Query: 244 ELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT-WKKLST 299
E G DQ +I+ K+ ES P I+ +GK+ K+EE+ + M + + +
Sbjct: 424 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 483
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ L++ + + + + + ++V +M G + ++ L K + G A+ +++
Sbjct: 484 RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 543
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
NK KP + I++ Y + G + + F+RM+++G F +L++ ++N
Sbjct: 544 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 601
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ +EA ++F + + K S YT L+ K L+ ++ ++G + ++
Sbjct: 357 RPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFN 416
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-R 397
A++ E G +++A I K ++ KP S++ ++ Y K G + + ++ M R
Sbjct: 417 AIINASSESGNLDQAMKIFEKMKESG-CKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 475
Query: 398 QVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
+ LVQA+ N + A+ I +M++ V P+
Sbjct: 476 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 517
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 140/310 (45%), Gaps = 11/310 (3%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVLLLMEKENVKLTQFSYKILIDIK 172
VF+ + GF N LL ++ + LD + V+ V M+K + +Y LI
Sbjct: 387 VFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE-VSGVFKEMKKAGYIPERDTYVSLISSY 445
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ Q+ + M GI PD ST + GGR E+AE + EME + K
Sbjct: 446 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 505
Query: 233 WTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
++ LL YA + D++ + + E + WL + + + K+N + EAE F
Sbjct: 506 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNS--KVNNLAEAEKAF 563
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ + L A++ +Y ++M+ K + ++ M ES ++ +++L+ ++
Sbjct: 564 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 623
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+ EK ++IL + + +P SY ++ Y ++G + ++F M+ G
Sbjct: 624 GDCEKCENILTEIKSSG-VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVT 682
Query: 408 FQTLVQAYIN 417
+ V++Y++
Sbjct: 683 YNIFVKSYVS 692
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 147/359 (40%), Gaps = 8/359 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
R A+ + ++A+ L +A + + P G Y L++ + A VF RM
Sbjct: 124 RVLATAIRVMARAGRLAEASALLDAAPGPDAG--AYTALVSAFSRAGRFRDAVAVFRRMV 181
Query: 121 DKGFPVTSFACNQLLILYKRLDK--KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
D G N +L +Y ++ K+V +++ M++ V +++Y LI +
Sbjct: 182 DSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALY 241
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
QV + MK+ G EPD T L Y R ++A +++EME T L
Sbjct: 242 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 301
Query: 239 LPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ Y + G +Q + + E P + I + K++ A + M +
Sbjct: 302 ISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGC 361
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K + Y AL+K++ + + + +G + W+ L+ + + G ++ S
Sbjct: 362 KPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNG-LDSEVS 420
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ K ++ + P +Y+ ++ Y++ G +I+ RM + G + ++ A
Sbjct: 421 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 479
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 125/291 (42%), Gaps = 5/291 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL++ C K+A +VF+ MK GF N LL +Y + + A +V+ M
Sbjct: 227 TYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM 286
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E+ + +Y LI + L + + M+ +G++PD T L G+
Sbjct: 287 ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKI 346
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM--AA 270
+ A EM + K + T L+ ++ GK ++ ++ S ++ D+
Sbjct: 347 DAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTL 406
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ +G+ E VFK M K Y +L+ Y+ + + K+M E+G
Sbjct: 407 LAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI 466
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ ++A++ GG E+A+ + + ++++ KP SY ++ YA
Sbjct: 467 YPDVSTYNAVLSALARGGRWEQAEKLFAEMEERD-CKPDEYSYSSLLHAYA 516
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 104 VAGNN--VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKL 160
+ G N V+K E++ + MK+ +++ N L+ +Y RL D +K ++L ++ V+
Sbjct: 584 IYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRP 643
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
++SY +I G+ + ++ MK G++PD T I K YVS E+A ++
Sbjct: 644 DRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELV 703
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGK 247
+ M K + T ++ Y GK
Sbjct: 704 RYMVTQGCKPNERTYNSIVEGYCRNGK 730
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 11/208 (5%)
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC--MAAI 271
E A +E+ G+ + H R+L + +A ++A L ++ P D A +
Sbjct: 105 ELAAVAARELHGEGVLHHP---RVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALV 161
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK---DLVKQMAES 328
A+ + + +A AVF+RM + + + Y +L VY+ KM K +LV M E
Sbjct: 162 SAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYS--KMAVPWKEVVELVASMKEH 219
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G ++ L+ ++A + + + F+P ++ ++D Y K
Sbjct: 220 GVAPDRYTYNTLISCCRRRALYKEAAQV-FDEMKASGFEPDKVTFNSLLDVYGKARRHDE 278
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYI 416
++ M +VG + +L+ +Y+
Sbjct: 279 AIEVIQEMERVGCPPSVVTYNSLISSYV 306
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 179/410 (43%), Gaps = 31/410 (7%)
Query: 60 ERDYASCLDLIAKL--RGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFN 117
++ + S L LI+K+ GL+ P++ +++ ++ N+ +A ++F
Sbjct: 367 QKHFHSLLSLISKVEKNGLK---------PDT----ILFNAIINASSESGNLDQAMKIFE 413
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQS 175
+MK+ G T+ N L+ Y ++ K + + LL ++ E ++ + IL+
Sbjct: 414 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQ 473
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML-KEMEGDNLKEHRWT 234
+ +V M+S G++PD T LAK Y G AE M+ M + +K + T
Sbjct: 474 RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRT 533
Query: 235 CRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
C ++ Y E GK ++ R + K +P L V + I+ + +N ++ V M
Sbjct: 534 CGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 593
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K ++ L+ ++ + + +++ M E G A+ L K + GE E
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 352 KADSILLKAQQQNKF--KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ-VGYVARFKQF 408
KA+ IL Q KF +P Y I+ + G++ +++ +M VG +
Sbjct: 654 KAEQIL---NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 710
Query: 409 QTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVS 456
+TL+ + AK P A + M NV P + +A D ++ VS
Sbjct: 711 ETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIA--DGWKSIGVS 758
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 104/238 (43%), Gaps = 4/238 (1%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + EG +P T L +++ ++E + LK ++ +
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400
Query: 244 ELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT-WKKLST 299
E G DQ +I+ K+ ES P I+ +GK+ K+EE+ + M + + +
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ L++ + + + + + ++V +M G + ++ L K + G A+ +++
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 520
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
NK KP + I++ Y + G + + F+RM+++G F +L++ ++N
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ +EA ++F + + K S YT L+ K L+ ++ ++G + ++
Sbjct: 334 RPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFN 393
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-R 397
A++ E G +++A I K ++ KP S++ ++ Y K G + + ++ M R
Sbjct: 394 AIINASSESGNLDQAMKIFEKMKESG-CKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 398 QVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
+ LVQA+ N + A+ I +M++ V P+
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 140/310 (45%), Gaps = 11/310 (3%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVLLLMEKENVKLTQFSYKILIDIK 172
VF+ + GF N LL ++ + LD + V+ V M+K + +Y LI
Sbjct: 405 VFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSE-VSGVFKEMKKAGYIPERDTYVSLISSY 463
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ Q+ + M GI PD ST + GGR E+AE + EME + K
Sbjct: 464 SRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDE 523
Query: 233 WTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
++ LL YA + D++ + + E + WL + + + K+N + EAE F
Sbjct: 524 YSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNS--KVNNLAEAEKAF 581
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ + L A++ +Y ++M+ K + ++ M ES ++ +++L+ ++
Sbjct: 582 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 641
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+ EK ++IL + + +P SY ++ Y ++G + ++F M+ G
Sbjct: 642 GDCEKCENILTEIKSSG-VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVT 700
Query: 408 FQTLVQAYIN 417
+ V++Y++
Sbjct: 701 YNIFVKSYVS 710
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 147/359 (40%), Gaps = 8/359 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
R A+ + ++A+ L +A + + P G Y L++ + A VF RM
Sbjct: 142 RVLATAIRVMARAGRLAEASALLDAAPGPDAG--AYTALVSAFSRAGRFRDAVAVFRRMV 199
Query: 121 DKGFPVTSFACNQLLILYKRLDK--KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
D G N +L +Y ++ K+V +++ M++ V +++Y LI +
Sbjct: 200 DSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALY 259
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
QV + MK+ G EPD T L Y R ++A +++EME T L
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319
Query: 239 LPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ Y + G +Q + + E P + I + K++ A + M +
Sbjct: 320 ISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGC 379
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K + Y AL+K++ + + + +G + W+ L+ + + G ++ S
Sbjct: 380 KPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNG-LDSEVS 438
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ K ++ + P +Y+ ++ Y++ G +I+ RM + G + ++ A
Sbjct: 439 GVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSA 497
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 125/291 (42%), Gaps = 5/291 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL++ C K+A +VF+ MK GF N LL +Y + + A +V+ M
Sbjct: 245 TYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM 304
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E+ + +Y LI + L + + M+ +G++PD T L G+
Sbjct: 305 ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKI 364
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM--AA 270
+ A EM + K + T L+ ++ GK ++ ++ S ++ D+
Sbjct: 365 DAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTL 424
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ +G+ E VFK M K Y +L+ Y+ + + K+M E+G
Sbjct: 425 LAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGI 484
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ ++A++ GG E+A+ + + ++++ KP SY ++ YA
Sbjct: 485 YPDVSTYNAVLSALARGGRWEQAEKLFAEMEERD-CKPDEYSYSSLLHAYA 534
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 104 VAGNN--VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKL 160
+ G N V+K E++ + MK+ +++ N L+ +Y RL D +K ++L ++ V+
Sbjct: 602 IYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRP 661
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
++SY +I G+ + ++ MK G++PD T I K YVS E+A ++
Sbjct: 662 DRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELV 721
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGK 247
+ M K + T ++ Y GK
Sbjct: 722 RYMVTQGCKPNERTYNSIVEGYCRNGK 748
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 23/207 (11%)
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC--MAAIEAWGKLN 278
+E+ G+ + H R+L + +A ++A L ++ P D A + A+ +
Sbjct: 130 RELHGEGVLHHP---RVLATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAG 186
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK---DLVKQMAESGCHIGPL 335
+ +A AVF+RM + + + Y +L VY+ KM K +LV M E G
Sbjct: 187 RFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYS--KMAVPWKEVVELVASMKEHGVAPDRY 244
Query: 336 AWDALVK------LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
++ L+ L+ E +V + + F+P ++ ++D Y K
Sbjct: 245 TYNTLISCCRRRALYKEAAQV-------FDEMKASGFEPDKVTFNSLLDVYGKARRHDEA 297
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYI 416
++ M +VG + +L+ +Y+
Sbjct: 298 IEVIQEMERVGCPPSVVTYNSLISSYV 324
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 142/348 (40%), Gaps = 38/348 (10%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+VY TL+ N V++AE +F MK KG T N L+ Y R + ++ + L+
Sbjct: 375 IVYNTLMDAYCKSNRVEEAEGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKLMAE 434
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGM--DQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ +K SY LI G+ +++ M D ++ MK +GI+P S + L Y
Sbjct: 435 MQDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLK-MKKDGIKPTSHSYTALIHAYSVS 493
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
G EKA A + M+ + +K T LL + G + +IWKL
Sbjct: 494 GWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLM------------ 541
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ KVE F L+ +A H + +D++ + A G
Sbjct: 542 -----RRYKVEGTRVTF---------------NTLVDGFAKHGHYKEARDVISKFANVGL 581
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
H + ++ L+ + GG+ K +L + N KP +Y ++ + + D
Sbjct: 582 HPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHN-LKPDSVTYSTMIYAFLRVRDFSQAF 640
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNK 438
M + G V F +Q L +A ++AK +DR V NK
Sbjct: 641 FYHQEMVKSGQVIDFNSYQKL-RAILDAKAAIKNRKDRRSLIGVVRNK 687
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 145/380 (38%), Gaps = 42/380 (11%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLL 100
L +W+ + + R L+ K R K +P FR VY +
Sbjct: 216 CLYFFQWMRSQEPSLVTPRACTVLFPLLGKARMGDKLMLLFTNLPSGREFRDVHVYNAAI 275
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKL 160
+ ++ + A +V+ M+ C+ ++I+ ++L D EK N K
Sbjct: 276 SGLLSSGRCEDAWKVYESMEADNVLPDHVTCSIMVIVMRKLG-HSAKDAWQFFEKMNGKG 334
Query: 161 TQFSYKILIDIKGQSNDLTGMDQ----VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
++ ++L + +S + G+ ++ ++ +G+ ++ L Y R E+A
Sbjct: 335 VKWGEEVLGALI-KSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEA 393
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGK 276
E + EM+ +K T +L+ Y+ + + V ++ MA ++ G
Sbjct: 394 EGLFIEMKTKGIKHTEATFNILMYAYSRKMQPEIVEKL-------------MAEMQDAG- 439
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK-GKDLVKQMAESGCHIGPL 335
K + K YT L+ Y K +S D +M + G
Sbjct: 440 ------------------LKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSH 481
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
++ AL+ + G EKA + Q++ KP +Y ++D + + GD + KI+
Sbjct: 482 SYTALIHAYSVSGWHEKAYAAFENMQREG-IKPSIETYTALLDAFRRAGDTQTLMKIWKL 540
Query: 396 MRQVGYVARFKQFQTLVQAY 415
MR+ F TLV +
Sbjct: 541 MRRYKVEGTRVTFNTLVDGF 560
>gi|298572040|gb|ADI88017.1| PPR protein [Silene latifolia]
Length = 224
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFTNIPNWG 186
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|298572062|gb|ADI88028.1| PPR protein [Silene latifolia]
Length = 224
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSHGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 145/317 (45%), Gaps = 6/317 (1%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKI 167
++K+ E+F M G P + F+ L+ Y R + +V+ ++L M+KE V + +Y
Sbjct: 158 LEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNT 217
Query: 168 LIDIKGQSN-DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+I+ + + G+ + M+ EGI+PD T L + G ++AE + + M
Sbjct: 218 VINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEG 277
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEA 283
+ T R L+ + +L K ++V+ + K ES+ P + +EA+ + A
Sbjct: 278 GMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHA 337
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
VF++M + + Y+ LL +Y H ++L +M S ++ L+++
Sbjct: 338 MGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEV 397
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
EGG ++ ++ ++N +P +Y ++ K G +KI M + G V
Sbjct: 398 FGEGGYFKEVVTLFHDMVEEN-VEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVP 456
Query: 404 RFKQFQTLVQAYINAKT 420
K + +++AY A +
Sbjct: 457 STKAYTGVIEAYGQAAS 473
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 157/382 (41%), Gaps = 42/382 (10%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
+ Y TLL C +AE VF M + G L+ + +L+K +KV+++L
Sbjct: 249 ITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKE 308
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME SY +L++ D+ V M+ P++ T ++L Y GR
Sbjct: 309 MESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGR 368
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN---------- 261
+ + EM+ N + T +L+ ++ E G +V ++ + E N
Sbjct: 369 YDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEG 428
Query: 262 ---------------------------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
P IEA+G+ EEA +F M++
Sbjct: 429 LIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMG 488
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K + + Y +L+ ++A + + + ++ +M ESG +++ +++ + +GG+ E+A
Sbjct: 489 SKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAI 548
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ ++ +F+P ++ ++ Y G + +E+ F +R G + + ++
Sbjct: 549 KTYVELEKA-RFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAV 607
Query: 415 YI--NAKTPAYGIRDRMRADNV 434
Y N AY + D M + V
Sbjct: 608 YARSNRWDDAYEVLDEMVTNKV 629
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 137/327 (41%), Gaps = 6/327 (1%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
+ Y T++ +C G N + +F M+ +G N LL A+++
Sbjct: 213 LTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFR 272
Query: 153 MEKENVKLTQFS-YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
E + + Y+ L++ G+ N L + ++++ M+S G PD S+ +L + Y S G
Sbjct: 273 TMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKG 332
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCM 268
A + ++M+ + T +LL LY G+ D V ++ K+ + P +
Sbjct: 333 DIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYN 392
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
IE +G+ +E +F M + + + Y L+ + K ++ M E
Sbjct: 393 VLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEK 452
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G A+ +++ + + E+A ++ + KP +Y +++ +A+ G
Sbjct: 453 GIVPSTKAYTGVIEAYGQAASYEEA-LVMFNTMNEMGSKPTVETYNSLINMFARGGLYKE 511
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
+E I +M + G F +++ Y
Sbjct: 512 SEAIMWKMGESGVARDRDSFNGVIEGY 538
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 120/289 (41%), Gaps = 9/289 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LM 153
Y L+ C G + A+++ M +KG ++ A ++ Y + + A V+ M
Sbjct: 425 TYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTM 484
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ K T +Y LI++ + + ++ M G+ D + + + Y GG+
Sbjct: 485 NEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQF 544
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA---A 270
E+A E+E + T +L +Y G D+ ++ ++ L M
Sbjct: 545 EEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMM 604
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA--LLKV-YADHKMLSKGKDLVKQMAE 327
I + + N+ ++A V M K+S H ++K Y D+ + + ++
Sbjct: 605 IAVYARSNRWDDAYEVLDEMVTN--KVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNS 662
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
GC +G ++ L++ G+ E+A +L +A ++ F +F L+
Sbjct: 663 EGCGLGMRFYNTLLEALWWLGQKERAARVLSEAIKRGLFPELFRKSKLV 711
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 10/169 (5%)
Query: 286 VFKRMSK-TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+FK M + W K + YT ++ + +L K ++ ++M G ++ AL+ +
Sbjct: 128 LFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSY 187
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG-DIHSTEKIFHRMRQVGYVA 403
G+ E + LL+ ++ K P +Y +++ A+ G + +F MR G
Sbjct: 188 GRHGQYEVSLE-LLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQP 246
Query: 404 RFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRK 452
+ TL+ A N G+ D A+ VF V + +R
Sbjct: 247 DIITYNTLLNACANR-----GLGD--EAEMVFRTMNEGGMVPDITTYRN 288
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 192/402 (47%), Gaps = 31/402 (7%)
Query: 34 LRTRRMYGKALQLSEWL--ETNKKLDFIERDYASCLDLIAKLRG----LQKAES-YIQKI 86
LR + + + + EW+ +++ + D I C +L+ G ++AES Y+Q +
Sbjct: 129 LRLNKKWDSIILVCEWILRKSSFQPDVI------CFNLLIDAYGQKFQYKEAESLYVQLL 182
Query: 87 PESF-RGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKD-----KGFPVTSFACNQLLILYK 139
+ E Y L+ A C+AG +++AE V M++ K VT + ++ +
Sbjct: 183 ESRYVPTEDTYALLIKAYCMAGL-IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 241
Query: 140 RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
+ + ++ DV M+++ K T +Y ++I++ G+++ ++ M+S +P+ T
Sbjct: 242 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 301
Query: 200 QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-- 257
L + G EKAE + ++++ D L+ + L+ Y+ G A I+ L
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 258 ---CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
CE + M ++A+G+ +AEAVF+ M + + K + LL Y+ +
Sbjct: 362 HMGCEPDRASYNIM--VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN-KFKPMFSSY 373
++K + +VK+M+E+G ++++ L+ G+ K + IL A+ +N S+Y
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL--AEMENGPCTADISTY 477
Query: 374 MLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
++++ Y K G + E++F +++ + + + + AY
Sbjct: 478 NILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 519
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 17/271 (6%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEK 155
T L N A + +KAEE+F ++++ G + N L+ Y R A++ LM+
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY I++D G++ + + V E MK GI P + +L Y K
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG 275
EA++KEM + ++ + +L LY LG+ ++ +I E+ P C A I +
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP----CTADISTYN 478
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHY-------TALLKVYADHKMLSKGKDLVKQMAES 328
L + +R+ + + +L K++ T+ + Y+ K+ K ++ ++M +S
Sbjct: 479 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 538
Query: 329 GCHIGPLAWDALVKLHVEGGE--VEKADSIL 357
GC P A V L E VE+ S+L
Sbjct: 539 GC--APDGGTAKVLLSACSSEEQVEQVTSVL 567
>gi|298572008|gb|ADI88001.1| PPR protein [Silene latifolia]
gi|298572012|gb|ADI88003.1| PPR protein [Silene latifolia]
gi|298572028|gb|ADI88011.1| PPR protein [Silene latifolia]
gi|298572052|gb|ADI88023.1| PPR protein [Silene latifolia]
Length = 224
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPKIPNWG 186
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMY 124
>gi|298571978|gb|ADI87986.1| PPR protein [Silene latifolia]
gi|298571980|gb|ADI87987.1| PPR protein [Silene latifolia]
gi|298571982|gb|ADI87988.1| PPR protein [Silene latifolia]
gi|298571990|gb|ADI87992.1| PPR protein [Silene latifolia]
gi|298571994|gb|ADI87994.1| PPR protein [Silene latifolia]
gi|298571996|gb|ADI87995.1| PPR protein [Silene latifolia]
gi|298571998|gb|ADI87996.1| PPR protein [Silene latifolia]
gi|298572002|gb|ADI87998.1| PPR protein [Silene latifolia]
gi|298572020|gb|ADI88007.1| PPR protein [Silene latifolia]
gi|298572022|gb|ADI88008.1| PPR protein [Silene latifolia]
Length = 224
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 138/342 (40%), Gaps = 36/342 (10%)
Query: 89 SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVA 147
+F +VY TL+ N +++ E +F MK KG TS N L+ Y +R+ + V
Sbjct: 364 AFSNAIVYNTLMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPEIVE 423
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM-DQVVEAMKSEGIEPDSSTQAILAKH 206
++LL M+ ++ SY LI G+ N +T M MK GI+P S + L
Sbjct: 424 ELLLEMQDAGLQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHA 483
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV 266
Y G EKA + + M+ + +K T LL + G + RIWK+ S
Sbjct: 484 YSVSGWHEKAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMS------ 537
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
KVE F LL +A + +D++ +
Sbjct: 538 -----------EKVEGTRVTF---------------NILLDGFAKQGHYVEARDVISEFG 571
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
+ G H + ++ L+ + GG+ K LLK KP +Y+ ++ Y + D
Sbjct: 572 KLGLHPTVMTYNMLMNAYARGGQHSKLPQ-LLKEMATLNLKPDSITYLTMIYAYIRVRDF 630
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDR 428
M + G V K ++ L +A + AK+ +DR
Sbjct: 631 RRAFFYHKTMVKSGQVPDAKSYEKL-RAILEAKSKIKNRKDR 671
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 138/353 (39%), Gaps = 68/353 (19%)
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM---- 181
VTS +C L + + K VL + +N K D+ + L+G+
Sbjct: 225 VTSRSCTVLFPILGKAGKGDELMVLFMNLPQN--------KEFRDVHVYNASLSGLLYCQ 276
Query: 182 -----DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+V EAM+++ + PD T +I+ GR A+ + E N K +W+
Sbjct: 277 RYDDACKVYEAMEAQNVSPDHVTCSIMITMMRKNGR--SAKEAWEFFEKMNRKGVKWSPE 334
Query: 237 LLLPL---YAELGKAD-----QVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
+L L + + G + QV K SN V ++A+ K N++EE E +F
Sbjct: 335 ILGALVKSFCDEGLKNEALIIQVEMAKKGAFSNAI--VYNTLMDAYNKSNQIEEVEGIFA 392
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M K ++ + L+ Y+ ++L+ +M ++G ++ L+ +
Sbjct: 393 EMKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQDAGLQPDAKSYTCLISAY---- 448
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
+QNK M ++ F RM++VG +
Sbjct: 449 ------------GRQNKMTDMAAN-------------------AFLRMKKVGIKPTSHSY 477
Query: 409 QTLVQAYINA--KTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
L+ AY + AY + M+ + + P ++ A +DAFR++ ++ L
Sbjct: 478 TALIHAYSVSGWHEKAYSTFENMQTEGIKP--SIETYTALLDAFRRSGDTQTL 528
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 163/388 (42%), Gaps = 8/388 (2%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYR 97
+ + Q+ EW+ Y +D K ++ AE ++ E+ E +
Sbjct: 84 WPRVTQMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFG 143
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKE 156
L+ + +KAEE+F +M+ +G+ ACN L + + + + A+ L +EK
Sbjct: 144 VLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKY 203
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+ +Y +I I G++ + + + + +M+ P+ T L + G +A
Sbjct: 204 ECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREA 263
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA---IEA 273
E +++ + K + L+ Y++ G I++ + N ++ I A
Sbjct: 264 ERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINA 323
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ E+AE +FK M + K LL YA + + ++LV M G
Sbjct: 324 YGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPD 383
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQN--KFKPMFSSYMLIMDQYAKRGDIHSTEK 391
L +++L+ + G E +++L K + + + KP +Y ++ YA+ G I E+
Sbjct: 384 TLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEE 443
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAK 419
+F + ++ V + L+ Y K
Sbjct: 444 LFQGLARLKLVPDATTWTALMGGYAKKK 471
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 112/241 (46%), Gaps = 8/241 (3%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEK 155
T L N A + ++AE F+++++ + +A N L+ Y + A ++ M++
Sbjct: 248 TALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQR 307
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
S+ ILI+ G++ +++ ++M+S G P+ + +L Y GR E+
Sbjct: 308 NGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEE 367
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESN-----PWLDVCMA 269
AE ++ ME D K L+ Y G+ D A + K+ +S+ P +
Sbjct: 368 AEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNT 427
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + + + AE +F+ +++ +TAL+ YA K+ K ++K+M ESG
Sbjct: 428 LIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESG 487
Query: 330 C 330
C
Sbjct: 488 C 488
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 7/256 (2%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILI 169
KAE ++ M+ P L+ + R + A+ +++ + K ++Y L+
Sbjct: 227 KAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALM 286
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
+ Q G ++ + M+ G PD+ + IL Y G E AE + K M+
Sbjct: 287 EAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFS 346
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + LLL YA G+ ++ + E + P + + I A+G + E+ EA+
Sbjct: 347 PNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEAL 406
Query: 287 FKRMSKTWKKLSTKH---YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+M K+ K + Y L++VYA + + ++L + +A W AL+
Sbjct: 407 LAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGG 466
Query: 344 HVEGGEVEKADSILLK 359
+ + K SIL K
Sbjct: 467 YAKKKLYRKCTSILKK 482
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 253 RIWKLCE-------SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
R+ ++CE P L I+A+GK +E+AE F RM + + + + L
Sbjct: 86 RVTQMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVL 145
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLA----------------------------- 336
+ Y K ++L QM + G GPLA
Sbjct: 146 INGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYEC 205
Query: 337 ------WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
++ ++ ++ + GE KA+ +L ++ ++ P ++ +M+ +A++G E
Sbjct: 206 EPNIDTYNRMIVIYGKAGEPSKAE-MLYRSMRRAMCPPNICTFTALMNAFARQGLYREAE 264
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG--IRDRMRADNVFPN 437
+ F ++++ Y + L++AY +PA I M+ + FP+
Sbjct: 265 RYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPD 313
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 156/363 (42%), Gaps = 35/363 (9%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDK-KKVADVLL 151
+Y T++ N +K VF R+K+ GF V S+ C L+ LY ++ K K +V
Sbjct: 448 IYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGC--LINLYAKVGKISKALEVSK 505
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ME +K +Y +LI+ + D + E + +G++PD + + + G
Sbjct: 506 MMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMG 565
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV----- 266
++A M+KEM+ + HR T R +P+ +A ++ R LDV
Sbjct: 566 TMDRAICMVKEMQKE---RHRPTSRTFMPIIHGFARAGEMKRA---------LDVFDMMR 613
Query: 267 ---CMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
C+ + + L ++E+A + M+ + YT ++ YA
Sbjct: 614 RSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTG 673
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
K + ++ + G + ++AL+K + G ++ A ++ + QN + F Y ++
Sbjct: 674 KAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF-VYNIL 732
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNV 434
+D +A+RGD+ + +M+Q G + + + A A A + + M V
Sbjct: 733 IDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGV 792
Query: 435 FPN 437
PN
Sbjct: 793 KPN 795
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/355 (17%), Positives = 136/355 (38%), Gaps = 76/355 (21%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K ++ Y +++ + D+ Q E+M++ GIEP S L Y G E+A +
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR--------------------IWKLC 258
++M+ + ++ T +++ +A++G AD R I+ C
Sbjct: 363 CARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYC 422
Query: 259 ES------------------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
++ + +D+ ++ + + E+ VF+R+ + S
Sbjct: 423 QTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVV 482
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCH----------------------------- 331
Y L+ +YA +SK ++ K M +G
Sbjct: 483 SYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDV 542
Query: 332 ----IGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ P + ++ +++ G +++A ++K Q+ + +P ++M I+ +A+ G+
Sbjct: 543 VKDGLKPDVVLYNNIIRAFCGMGTMDRA-ICMVKEMQKERHRPTSRTFMPIIHGFARAGE 601
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNK 438
+ +F MR+ G + F L+ + + A I D M V PN+
Sbjct: 602 MKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNE 656
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLL 151
E Y T++ A + KA E F +++D+G + + LL + + + A V
Sbjct: 656 EHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 715
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M +N+ F Y ILID + D+ +++ MK G++PD T G
Sbjct: 716 EMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAG 775
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
+A M++EME +K + T L+ +A ++ R ++
Sbjct: 776 DMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQ 820
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEV-VYRTLLANCVAGNNVKKAEEVFN 117
E Y + + A L KA Y K+ E + +V Y LL C ++ A V
Sbjct: 656 EHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 715
Query: 118 RMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M + P +F N L+ + +R D + AD++ M++ VK +Y I+ ++
Sbjct: 716 EMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAG 775
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D+ +++E M++ G++P+ T L + EKA +EM+ LK
Sbjct: 776 DMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLK 828
>gi|298572024|gb|ADI88009.1| PPR protein [Silene latifolia]
gi|298572032|gb|ADI88013.1| PPR protein [Silene latifolia]
gi|298572044|gb|ADI88019.1| PPR protein [Silene latifolia]
gi|298572056|gb|ADI88025.1| PPR protein [Silene latifolia]
Length = 224
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMY 124
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 150/342 (43%), Gaps = 12/342 (3%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
IP++ + + TLL +K+AE + MK++G P+ + + N L+ Y LD +
Sbjct: 57 IPDA----IFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYG-LDGQP 111
Query: 146 VADVLLLMEKE---NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
+ LL E N K ++ +LI + V+ M++ G+ PD +
Sbjct: 112 EEAMKLLQEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNT 171
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCE 259
LA+ + G+ AE ++ EM+ L+ + T +++ Y G+ D+ R+ K+
Sbjct: 172 LAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDG 231
Query: 260 SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
+P + V ++ + + K + + VFK M K + + ++ + ++ + K
Sbjct: 232 ISPTIAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAK 291
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
++ +M E +A+ LVK + G E+ ++ L +N KP +Y ++
Sbjct: 292 AVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDEN-LKPNVITYTTVISG 350
Query: 380 YAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
Y + ++F MR + F+TL+ + A+ P
Sbjct: 351 YCSLAQMDDAMRVFQEMRSRSVFPNMQTFRTLIWGFKEARWP 392
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 122/291 (41%), Gaps = 7/291 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++NV + L++ ++ + + +V MK G +S+ L K Y G+
Sbjct: 51 MEEDNVIPDAIFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQ 110
Query: 213 KEKAEAMLKEMEGD-NLKEHRWTCRLLLPLYAE---LGKADQVARIWKLCESNPWLDVCM 268
E+A +L+EM D N K + T +L+ +A KA V + + P +
Sbjct: 111 PEEAMKLLQEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYN 170
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ + KL K +AE V M + + + + Y ++ Y + + L+++M
Sbjct: 171 TLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMD 230
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G ++ LVK + E + K D + K + KP ++ LIM+ + G I
Sbjct: 231 GISPTIAVFNHLVKGYSESMKPHKVDKVF-KLMENFGVKPDVQTFGLIMNAWCSTGLIDE 289
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG--IRDRMRADNVFPN 437
+ + RM++ + LV+ Y P G + M +N+ PN
Sbjct: 290 AKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPN 340
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 3/197 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + L AKL AE+ I ++ + E Y ++ +A + ++ + RMK
Sbjct: 169 YNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMK 228
Query: 121 DKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
G T N L+ Y + + KV V LME VK ++ ++++ + +
Sbjct: 229 MDGISPTIAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLID 288
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V+ MK ++PD +IL K Y GR E+ EA L M +NLK + T ++
Sbjct: 289 EAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVI 348
Query: 240 PLYAELGKADQVARIWK 256
Y L + D R+++
Sbjct: 349 SGYCSLAQMDDAMRVFQ 365
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+ + K + + + + + YT LL L +G L++QM E + ++ L+
Sbjct: 8 QVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDAIFFNTLL 67
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMF-SSYMLIMDQYAKRGDIHSTEKIFHRM-RQV 399
+ E G++++A++++L+ +++ P+ SSY ++ Y G K+ M + V
Sbjct: 68 NGYCEAGKMKEAEALVLEMKERG--CPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDV 125
Query: 400 GYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDA 449
+ F L++A+ + K P A + MRA V P+ +AQ+ A
Sbjct: 126 NSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFA 177
>gi|298572042|gb|ADI88018.1| PPR protein [Silene latifolia]
Length = 224
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFTNIPNWG 186
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 152/348 (43%), Gaps = 17/348 (4%)
Query: 63 YASCLDLIAKLRGLQKAES-YIQKIPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y + LD + L K E + + + + +VV T+L N C AG + +A ++ + M
Sbjct: 337 YVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGR-INEAFDLLDTM 395
Query: 120 KDKGFPVTSFACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
+ +G N L L+ RLD D+ ME V+ T ++Y +LID G+S
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRANRLDD--ALDLFSNMESLGVEPTAYTYILLIDYHGKSG 453
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ E MK+ GI P+ GR +A+AM E++ L T
Sbjct: 454 HPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYN 513
Query: 237 LLLPLYAELGKADQVARIWK-----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
+++ Y+++G+ D+ ++ CE P + V + I+ K +VEEA +F RM
Sbjct: 514 MMMKCYSKVGQVDEAIKLLSEMSKVQCE--PDVIVINSLIDTLYKAGRVEEAWQMFCRME 571
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ + Y LL + K L + M GC + ++ L+ + EV+
Sbjct: 572 EMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVD 631
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
A + K N +P ++ I+ + K+ I + +FH+M+++
Sbjct: 632 LALKMFYKMTTMN-CRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL 678
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 143/360 (39%), Gaps = 46/360 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFR--GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y +D + R L A K+ S +V Y TLL ++ K E+++ M+
Sbjct: 302 YTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEME 361
Query: 121 DKGFP--VTSFACNQLLILYKRLDK----KKVADVLLLMEKENVKLTQFSYKILIDIKGQ 174
G+ V +F IL L K + D+L M K+ V +Y LI +
Sbjct: 362 ADGYAPDVVTFT-----ILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
+N L + M+S G+EP + T +L ++ G KA ++M
Sbjct: 417 ANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKM----------- 465
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
KA +A P + C A++ + ++ ++ EA+A+F + +
Sbjct: 466 ------------KARGIA---------PNIVACNASLYSLAEMGRLGEAKAMFNELKSSG 504
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y ++K Y+ + + L+ +M++ C + ++L+ + G VE+A
Sbjct: 505 LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAW 564
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ + ++ N P +Y +++ K G I ++F M G F TL+
Sbjct: 565 QMFCRMEEMN-LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDC 623
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 145/349 (41%), Gaps = 11/349 (3%)
Query: 75 GLQKAESYIQKIPESFRGEVV----YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFA 130
GL++A S ++K+ E+ G V+ Y L+ + K+A EV+ RM +G +
Sbjct: 174 GLRQAPSALEKMREA--GFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKT 231
Query: 131 CNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMK 189
+ L++ KR + K V +L ME ++ ++Y I I + G+ + ++++ M
Sbjct: 232 FSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD 291
Query: 190 SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD 249
+G PD T +L + + + A + +M+ + K + T LL +++ G D
Sbjct: 292 DDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLD 351
Query: 250 QVARIWKLCESNPWL-DVCMAAI--EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+V +IW E++ + DV I A K ++ EA + M K + Y L+
Sbjct: 352 KVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLI 411
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
L DL M G + L+ H + G KA K + +
Sbjct: 412 SGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG-I 470
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
P + + A+ G + + +F+ ++ G + +++ Y
Sbjct: 471 APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCY 519
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 119/291 (40%), Gaps = 10/291 (3%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
F+Y LID G+S + + + + M + G +P++ T ++ + V R +KA +
Sbjct: 826 FTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYN 885
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWLDVCMAAIEAWGKL 277
+ + T L+ + G+ D ++ C N + + + +GKL
Sbjct: 886 LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNIL--VNGYGKL 943
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
V+ A FKRM K + K YT L+ + + +++ ++G +A+
Sbjct: 944 GHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAY 1003
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ ++ E+A S+ + Q + +++ LI++ G I KI+ ++
Sbjct: 1004 NLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILN-LGIVGMIEEAGKIYEELQ 1062
Query: 398 QVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
+G + L++ Y + AYGI +M PN AQ+
Sbjct: 1063 FIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 10/308 (3%)
Query: 137 LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD 196
L+ R ++ L M + L +SY LI QS +V M SEG++P
Sbjct: 169 LFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKP- 227
Query: 197 SSTQAILAKHYVSGGRKEKAEAM--LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
S + A SG R+ M L+EME L+ + +T + + + GK D+ RI
Sbjct: 228 -SLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRI 286
Query: 255 WKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
K + + P + I+A K+++A +F +M + K Y LL ++D
Sbjct: 287 MKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSD 346
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
L K + + +M G + + LV + G + +A +L ++Q P
Sbjct: 347 CGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVL-PNLH 405
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRM 429
+Y ++ + + +F M +G + L+ + + P + ++M
Sbjct: 406 TYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKM 465
Query: 430 RADNVFPN 437
+A + PN
Sbjct: 466 KARGIAPN 473
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 111/263 (42%), Gaps = 8/263 (3%)
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKH-YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
M V + M+ + I + T I+ K ++ GG ++ A + L++M + ++ L+
Sbjct: 143 MAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQ-APSALEKMREAGFVLNAYSYNGLI 201
Query: 240 PLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ G + +++ S P L A + A GK ++ + + M +
Sbjct: 202 HFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLR 261
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ YT ++V + + ++K+M + GC + + L+ +++ A +
Sbjct: 262 PNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCL 321
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
K + + KP +Y+ ++D+++ G + EKI+ M GY F LV A
Sbjct: 322 FTKMKSSSH-KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALC 380
Query: 417 NAK--TPAYGIRDRMRADNVFPN 437
A A+ + D MR V PN
Sbjct: 381 KAGRINEAFDLLDTMRKQGVLPN 403
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 131/363 (36%), Gaps = 43/363 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y LLA ++KA ++F M G + N LL + D+ +A +
Sbjct: 580 VTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYK 639
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M N + ++ +I + N + + MK + PD T L + G+
Sbjct: 640 MTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQ 698
Query: 213 KEKAEAMLKEM---EGDNLKEHRW-----------------------TCR-------LLL 239
E A + ++ G N+ W CR +L+
Sbjct: 699 IEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLI 758
Query: 240 PLYAELGKADQ--VAR-----IWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
P+ L K + VAR K P L V I+ + +++ VE A +F+ M
Sbjct: 759 PIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKS 818
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
T Y +L+ + +++ DL +M GC + ++ ++ V+ ++K
Sbjct: 819 AGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDK 878
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
A + + F P ++ ++D K G + ++F M G + LV
Sbjct: 879 AMDLYYNLVSGD-FSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILV 937
Query: 413 QAY 415
Y
Sbjct: 938 NGY 940
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 106/276 (38%), Gaps = 12/276 (4%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL---LILYKRLDK 143
P++F Y +L+ + + ++++ M +G + N + L+ RLDK
Sbjct: 823 PDTF----TYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDK 878
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
D+ + + T ++ LID +S L ++ + M G P+S+ IL
Sbjct: 879 --AMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNIL 936
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCES 260
Y G + A K M + ++ + +L+ + G+ D + K
Sbjct: 937 VNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGL 996
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
+P L I G+ + EEA ++F M Y +L+ M+ +
Sbjct: 997 DPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGK 1056
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ +++ G ++AL++ + G E A I
Sbjct: 1057 IYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGI 1092
>gi|298572014|gb|ADI88004.1| PPR protein [Silene latifolia]
gi|298572038|gb|ADI88016.1| PPR protein [Silene latifolia]
Length = 224
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 192/402 (47%), Gaps = 31/402 (7%)
Query: 34 LRTRRMYGKALQLSEWL--ETNKKLDFIERDYASCLDLIAKLRG----LQKAES-YIQKI 86
LR + + + + EW+ +++ + D I C +L+ G ++AES Y+Q +
Sbjct: 151 LRLNKKWDSIILVCEWILRKSSFQPDVI------CFNLLIDAYGQKFQYKEAESLYVQLL 204
Query: 87 PESF-RGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKD-----KGFPVTSFACNQLLILYK 139
+ E Y L+ A C+AG +++AE V M++ K VT + ++ +
Sbjct: 205 ESRYVPTEDTYALLIKAYCMAGL-IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKR 263
Query: 140 RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
+ + ++ DV M+++ K T +Y ++I++ G+++ ++ M+S +P+ T
Sbjct: 264 KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICT 323
Query: 200 QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-- 257
L + G EKAE + ++++ D L+ + L+ Y+ G A I+ L
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 258 ---CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
CE + M ++A+G+ +AEAVF+ M + + K + LL Y+ +
Sbjct: 384 HMGCEPDRASYNIM--VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN-KFKPMFSSY 373
++K + +VK+M+E+G ++++ L+ G+ K + IL A+ +N S+Y
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL--AEMENGPCTADISTY 499
Query: 374 MLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
++++ Y K G + E++F +++ + + + + AY
Sbjct: 500 NILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 541
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 17/271 (6%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEK 155
T L N A + +KAEE+F ++++ G + N L+ Y R A++ LM+
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY I++D G++ + + V E MK GI P + +L Y K
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG 275
EA++KEM + ++ + +L LY LG+ ++ +I E+ P C A I +
Sbjct: 445 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP----CTADISTYN 500
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHY-------TALLKVYADHKMLSKGKDLVKQMAES 328
L + +R+ + + +L K++ T+ + Y+ K+ K ++ ++M +S
Sbjct: 501 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 560
Query: 329 GCHIGPLAWDALVKLHVEGGE--VEKADSIL 357
GC P A V L E VE+ S+L
Sbjct: 561 GC--APDGGTAKVLLSACSSEEQVEQVTSVL 589
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 178/410 (43%), Gaps = 31/410 (7%)
Query: 60 ERDYASCLDLIAKL--RGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFN 117
++ + S L LI+K+ GL+ P++ +++ ++ N+ +A ++F
Sbjct: 367 QKHFHSLLSLISKVEKNGLK---------PDT----ILFNAIINASSESGNLDQAMKIFE 413
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQS 175
+MK+ G T+ N L+ Y ++ K + + LL ++ E ++ + IL+
Sbjct: 414 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQ 473
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML-KEMEGDNLKEHRWT 234
+ +V M+S G++PD T LAK Y G AE M+ M + +K + T
Sbjct: 474 RKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRT 533
Query: 235 CRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
C ++ Y E GK ++ R + K +P L V + I+ + +N ++ V M
Sbjct: 534 CGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME 593
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K ++ L+ ++ + + +++ M E G A+ L K + GE E
Sbjct: 594 EFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 352 KADSILLKAQQQNKF--KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ-VGYVARFKQF 408
KA IL Q KF +P Y I+ + G++ +++ +M VG +
Sbjct: 654 KAKQIL---NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 710
Query: 409 QTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVS 456
+TL+ + AK P A + M NV P + +A D ++ VS
Sbjct: 711 ETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIA--DGWKSIGVS 758
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 104/238 (43%), Gaps = 4/238 (1%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + EG +P T L +++ ++E + LK ++ +
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400
Query: 244 ELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT-WKKLST 299
E G DQ +I+ K+ ES P I+ +GK+ K+EE+ + M + + +
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ L++ + + + + + ++V +M G + ++ L K + G A+ +++
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 520
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
NK KP + I++ Y + G + + F+RM+++G F +L++ ++N
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLN 578
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ +EA ++F + + K S YT L+ K L+ ++ ++G + ++
Sbjct: 334 RPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFN 393
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-R 397
A++ E G +++A I K ++ KP S++ ++ Y K G + + ++ M R
Sbjct: 394 AIINASSESGNLDQAMKIFEKMKESG-CKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 398 QVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
+ LVQA+ N + A+ I +M++ V P+
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 141/332 (42%), Gaps = 8/332 (2%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKG 173
+F ++++G+P+ +A L+ R K K+ M++ + + +Y ++ID+ G
Sbjct: 104 LFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYG 163
Query: 174 Q-SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ + ++ E MK++GI+PD T SG E+A + +M+ N R
Sbjct: 164 KKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDR 223
Query: 233 WTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
T LL +Y + G ++ A + K ES P + + A+G+ A +
Sbjct: 224 VTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDS 283
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
M + YT+LL Y+ + + ++ QM S C ++AL+ +H +
Sbjct: 284 MVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKN 343
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+ ++ + Q +P ++ ++ + K G K+F M++ G+ F
Sbjct: 344 FSEM-MVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFN 402
Query: 410 TLVQAY--INAKTPAYGIRDRMRADNVFPNKA 439
L++AY + A I D M P+ A
Sbjct: 403 ILIEAYGRCGSSDQALSIYDGMLQAGCTPDLA 434
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 147/365 (40%), Gaps = 44/365 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-- 152
Y +LL+ V++A E++N+M+ SF N L+ ++ + K ++++++
Sbjct: 295 TYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGK--NKNFSEMMVIFE 352
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY---- 207
M+ V+ ++ L+ G++ + + +V MK G EPD +T IL + Y
Sbjct: 353 DMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCG 412
Query: 208 -------------------------------VSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
GR E AE +L E+ + K +
Sbjct: 413 SSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYA 472
Query: 237 LLLPLYAELGKADQVARIWKLCES--NPWLDVCMAA-IEAWGKLNKVEEAEAVFKRMSKT 293
+L YA G+ +++ + + P+ + + + + K + V+EAE F M
Sbjct: 473 SMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHH 532
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
T + A++ +Y M+ K D + +G + ++ L+ ++ G K
Sbjct: 533 GYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKC 592
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ L + + P SY ++ Y+K G + S +IFH M G + T V
Sbjct: 593 EATLRECMAAGQ-TPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVG 651
Query: 414 AYINA 418
Y+N
Sbjct: 652 CYVNG 656
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 139/328 (42%), Gaps = 7/328 (2%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLL 151
E Y T + C +G+ ++A E+F +MK N LL +Y + + A+VL
Sbjct: 188 EYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLK 247
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME +Y L+ G++ ++ ++M S+GIEPD T L Y G
Sbjct: 248 EMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAG 307
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCM 268
+ E+A + +M N + +T L+ ++ + ++ I+ + C P +
Sbjct: 308 KVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWN 367
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ + A+GK E VF+ M K + + L++ Y + + M ++
Sbjct: 368 SLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQA 427
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
GC ++ L+ G E A+ ++L ++ +KP +Y ++ YA G++
Sbjct: 428 GCTPDLATFNTLLAALAREGRWEHAE-LILDELNRSSYKPNDIAYASMLHAYANGGELEK 486
Query: 389 TEKIFHRMRQVGYVARFK-QFQTLVQAY 415
+++ + + YV K +T V Y
Sbjct: 487 LKEMVDTLHTI-YVPFTKILLKTFVLVY 513
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ----FSYK 166
KA + F ++ G N L+ +Y R + + L +E + Q SY
Sbjct: 556 KATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATL---RECMAAGQTPDLVSYN 612
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+I + L+ ++ M S GI+PDS T YV+GG +A +++K M
Sbjct: 613 TVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKT 672
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
K T R L+ Y ++GK ++V RI K +S+
Sbjct: 673 GCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 112/300 (37%), Gaps = 34/300 (11%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
+ TLLA + AE + + + + A +L Y + +K+ +++ +
Sbjct: 435 TFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTL 494
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
V T+ K + + + + + + AM+ G D+ST + Y G
Sbjct: 495 HTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMM 554
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
+KA + L+ T L+ +Y G +++ CE+ L CMAA
Sbjct: 555 DKATDTFALLRSTGLEPDVVTYNCLMGMYGREG-------MYRKCEAT--LRECMAA--- 602
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+T +S Y ++ Y+ H LS + +M +G
Sbjct: 603 -----------------GQTPDLVS---YNTVIFSYSKHGQLSSATRIFHEMVSNGIQPD 642
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++ V +V GG +A S++ K + KP +Y ++D Y K G E+I
Sbjct: 643 SFTYNTFVGCYVNGGMFPEALSVV-KHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERIL 701
>gi|298571986|gb|ADI87990.1| PPR protein [Silene latifolia]
Length = 224
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMY 124
>gi|298572026|gb|ADI88010.1| PPR protein [Silene latifolia]
gi|298572046|gb|ADI88020.1| PPR protein [Silene latifolia]
Length = 224
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIIPNWTTFSTMASMY 124
>gi|298572004|gb|ADI87999.1| PPR protein [Silene latifolia]
gi|298572006|gb|ADI88000.1| PPR protein [Silene latifolia]
Length = 224
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPKIPNWG 186
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMY 124
>gi|298572010|gb|ADI88002.1| PPR protein [Silene latifolia]
gi|298572034|gb|ADI88014.1| PPR protein [Silene latifolia]
gi|298572054|gb|ADI88024.1| PPR protein [Silene latifolia]
Length = 224
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMY 124
>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 135/326 (41%), Gaps = 6/326 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-ME 154
Y + V + + AE ++ M GF + F ++ + ++ K ++ D LL ME
Sbjct: 47 YNRFIGVLVKESRFELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDME 106
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+++ I +D+ + N + Q M G EPD + IL G+
Sbjct: 107 TLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD----QVARIWKLCESNPWLDVCMAA 270
A + M + C L+ K D VA K + V A
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNAL 226
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I + K ++E+AEA+ MSK + Y LL Y D+ ML + + ++ +M SG
Sbjct: 227 ISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGI 286
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ +++ L+K H ++ S +LK + F + SY +++ + + +
Sbjct: 287 QLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVV-SYSTLIETFCRASNTKKAY 345
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYI 416
K+F MRQ G V F +L++A++
Sbjct: 346 KLFEEMRQKGIVTNVVTFTSLIKAFL 371
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 93/255 (36%), Gaps = 22/255 (8%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
PD+ ++ L Y + N L RAE + M +QL + Y
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMT-------EMVRSGIQLDAY------------SY 293
Query: 64 ASCLDLIAKLRGLQKAESYIQKI--PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
L ++ + S++ K P F V Y TL+ +N KKA ++F M+
Sbjct: 294 NQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQ 353
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTG 180
KG L+ + R VA LL M + + + Y ++D +S ++
Sbjct: 354 KGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+ M I PD+ + L GR +A + ++M+G T + ++
Sbjct: 414 AYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIG 473
Query: 241 LYAELGKADQVARIW 255
K ++W
Sbjct: 474 GLIREKKLSAAYKVW 488
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 154/350 (44%), Gaps = 10/350 (2%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM--EKENVKLTQFSYK 166
V +A ++F +MK+ G T+ N L+ + + + + LL M + ENVK +Y
Sbjct: 146 VDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYN 205
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
ILI L V+ M + GI+PD T +A+ Y G EKAE ++ +M+ +
Sbjct: 206 ILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYN 265
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVAR-IWKLCE--SNPWLDVCMAAIEAWGKLNKVEEA 283
+K + TC +++ Y + G + R ++++ E +P V + I+ +
Sbjct: 266 KVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGV 325
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+ M + K ++ ++ ++ ++ +++ M ++G A+ L K
Sbjct: 326 DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKG 385
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+V G+ KA+S LL + + + + I+ + G + + +M ++G
Sbjct: 386 YVRAGQPRKAES-LLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSP 444
Query: 404 RFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFR 451
K ++TL+ Y AK P A I M V P + VA DA+R
Sbjct: 445 NLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVA--DAWR 492
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K EA+AVF +++ K + YT L+ K L+ ++A++G + +
Sbjct: 75 KPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLN 134
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A++ + G+V++A I K ++ KP S+Y ++ + G + + K+ M Q
Sbjct: 135 AMINAFSDSGKVDEAMKIFQKMKEYG-CKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQ 193
Query: 399 VGYV-ARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
V + + L+QA+ K A+ + +M A + P+
Sbjct: 194 DENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPD 235
>gi|298572066|gb|ADI88030.1| PPR protein [Silene latifolia]
Length = 224
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV + M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ +KAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLDKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M V + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFQEMDLDPRIVPNWTTFSTMASMY 124
>gi|298572058|gb|ADI88026.1| PPR protein [Silene latifolia]
Length = 224
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
KV +++ M+++ + L +SY I + +G M+QV M + I P+ +T + +
Sbjct: 61 KVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E++K + L+
Sbjct: 11 YGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDKVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMY 124
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 157/365 (43%), Gaps = 14/365 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIP-ESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y + LD + R L + + ++ + +VV T+L + C AGN +A + + M
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN-FGEAFDTLDVM 389
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSN 176
+D+G N L+ R+ ++ D L L ME VK T ++Y + ID G+S
Sbjct: 390 RDQGILPNLHTYNTLICGLLRV--HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D + E MK++GI P+ GR +A+ + ++ L T
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 507
Query: 237 LLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
+++ Y+++G+ D+ ++ N P + V + I K ++V+EA +F RM +
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K + Y LL + + + +L + M + GC + ++ L + EV A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+L K +F+ Y I+ K G + FH+M+++ Y F TL+
Sbjct: 628 LKMLFKMMDMGCVPDVFT-YNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLP 685
Query: 414 AYINA 418
+ A
Sbjct: 686 GVVKA 690
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 139/350 (39%), Gaps = 12/350 (3%)
Query: 107 NNVKKAEEVFNRM-KDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFS 164
NNV A +F + KD G N L+ D ++A DV L ++ +
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y L+D G+S + + ++ + M + E ++ T I+ V G + A + ++
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES------NPWLDVCMAAIEAWGKLN 278
D ++ T PL L K+ ++ +L E P + I +GK
Sbjct: 883 SD--RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ + A A+FKRM K + K Y+ L+ + +G K++ ESG + + ++
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + +E+A + + + P +Y ++ G + KI++ +++
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060
Query: 399 VGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
G F L++ Y + P AY + M PN Q+
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 144/355 (40%), Gaps = 7/355 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
+ C+ ++ + + +A ++++ + G V Y L+ + A+EVF +MK
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 121 DKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
LL + D V MEK+ ++ IL+D ++ +
Sbjct: 321 TGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
++ M+ +GI P+ T L + R + A + ME +K +T + +
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 240 PLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
Y + G + ++ ++ P + C A++ + K + EA+ +F +
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ Y ++K Y+ + + L+ +M E+GC + ++L+ + V++A +
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
++ ++ K KP +Y ++ K G I ++F M Q G F TL
Sbjct: 561 FMRMKEM-KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 6/262 (2%)
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHY-VSGGRKEKAEAMLKEME-GDNLKEHRWTCRLL 238
M V + M+ I+ D++T + K V GG K+ A+ K E G L + + +
Sbjct: 137 MAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIH 196
Query: 239 LPLYAEL-GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
L L + +A +V R L P L + + GK ++ + K M K
Sbjct: 197 LLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKP 256
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ +T ++V +++ +++K+M + GC + + L+ +++ A +
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
K + + KP +Y+ ++D+++ D+ S ++ + M + G+V F LV A
Sbjct: 317 EK-MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCK 375
Query: 418 AKT--PAYGIRDRMRADNVFPN 437
A A+ D MR + PN
Sbjct: 376 AGNFGEAFDTLDVMRDQGILPN 397
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 159/394 (40%), Gaps = 17/394 (4%)
Query: 34 LRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLR---GLQKAESYIQKIPESF 90
L R+ GK +++ + +K I+RD + L + L GL++A ++K+ E
Sbjct: 125 LEALRVDGKLEEMAYVFDLMQK-RIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREF- 182
Query: 91 RGEVV----YRTLLANCVAGNNVKKAEEVFNRMKDKGF-PVTSFACNQLLILYKRLDKKK 145
G V+ Y L+ + +A EV+ RM +GF P + ++ L KR D
Sbjct: 183 -GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
V +L ME +K +++ I I + G++ + ++++ M EG PD T +L
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---P 262
+ + + A+ + ++M+ K R T LL +++ D V + W E + P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
+ ++A K EA M + Y L+ L +L
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI-LLKAQQQNKFKPMFSSYMLIMDQYA 381
M G + P A+ +V + G + ++ + + P + + A
Sbjct: 422 GNMESLG--VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
K G ++IF+ ++ +G V + +++ Y
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 139/406 (34%), Gaps = 81/406 (19%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--------------ILYK 139
V Y TLLA +++A E+F M KG P + N L +L+K
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 140 RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM-----KSEGIE 194
+D V DV F+Y +I L QV EAM + +
Sbjct: 634 MMDMGCVPDV-------------FTYNTII------FGLVKNGQVKEAMCFFHQMKKLVY 674
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAML----------------KEMEGDNLKE-------- 230
PD T L V E A ++ +++ G L E
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVS 734
Query: 231 ------HRWTCR----LLLPLYAELGKADQVARIWKLCES-------NPWLDVCMAAIEA 273
CR +L+P+ K + V+ L E P L I
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ + +E A+ VF ++ T Y LL Y + + +L K+M+ C
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+ + ++ V+ G V+ A + F P +Y ++D +K G ++ +++F
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 394 HRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPN 437
M G + L+ + A A + RM + V P+
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 3/175 (1%)
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ C +EA K+EE VF M K K T Y + K + L + +++
Sbjct: 119 ETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRK 178
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M E G + +++ L+ L ++ +A + + + F+P +Y +M KR
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG-FRPSLQTYSSLMVGLGKRR 237
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
DI S + M +G F ++ A AY I RM + P+
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 167/386 (43%), Gaps = 22/386 (5%)
Query: 46 LSEWLETNKKLDFIERDYASCLDLIAKLRGL--QKAESYIQKIPESFRGEVVYRTLLANC 103
LSE E F ++ ++ +L+A L+GL K + + F + Y+++L N
Sbjct: 120 LSELFEP-----FKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNS 174
Query: 104 VAG---------NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
V V A +FN +++ GF + ++ L+ + + ++ +V M
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 154 EKENVKLTQFSYKILIDIKGQ-SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
E++ K T +Y +++++ G+ + +VE MKS+GI PD+ T L G
Sbjct: 235 EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMA 269
++A + +EM+ + T LL +Y + + + ++ L +P + +
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A+ + ++EA + +M++ K YT LL + + + ++M +G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
C ++A +K++ G+ + I + P ++ ++ + + G
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG-LSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
+F M++ G+V + F TL+ AY
Sbjct: 474 SGVFKEMKRAGFVPERETFNTLISAY 499
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 126/317 (39%), Gaps = 9/317 (2%)
Query: 106 GNNVKKAE--EVFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVLLLMEKENVKLT 161
GN K E ++F+ + G N LL ++ + +D + V+ V M++
Sbjct: 430 GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE-VSGVFKEMKRAGFVPE 488
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+ ++ LI + V M G+ PD ST + GG E++E +L
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 222 EMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
EME K + T LL YA E+G +A P + + K +
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCD 608
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ EAE F + + +++ +Y +M++K ++ M E G ++
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+L+ +H + K++ IL + + KP SY ++ Y + + +IF MR
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKG-IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Query: 399 VGYVARFKQFQTLVQAY 415
G V + T + +Y
Sbjct: 728 SGIVPDVITYNTFIGSY 744
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 144/342 (42%), Gaps = 19/342 (5%)
Query: 89 SFRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA 147
S +G+ V R+L+ N +G E+F KDK +S +LL K L K
Sbjct: 96 SPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSS----ELLAFLKGLGFHKKF 151
Query: 148 DVLL-----LMEKENVK--LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQ 200
D+ L M++++ + L I+I + G+ ++ + ++ +G D +
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 211
Query: 201 AILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA-DQVARIWKLCE 259
L + + GR +A + K+ME D K T ++L ++ ++G +++ + + +
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 260 SN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
S+ P I + + +EA VF+ M Y ALL VY
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK-FKPMFSSYML 375
+ ++ +M +G + +++L+ + G +++A + LK Q K KP +Y
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA--MELKNQMAEKGTKPDVFTYTT 389
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
++ + + G + S IF MR G F ++ Y N
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 147/389 (37%), Gaps = 48/389 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL+ C G+ ++A +VF MK GF N LL +Y + + K A VL M
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ +Y LI + L ++ M +G +PD T L + G+
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNP----W--- 263
E A ++ +EM K + T + +Y GK ++ +I+ +C +P W
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 264 --------LDVCMAA--------------------IEAWGKLNKVEEAEAVFKRMSKTWK 295
+D ++ I A+ + E+A V++RM
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
Y +L A M + + ++ +M + C L + +L+ + G E+ S
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 356 ILLKAQQQNKFKP---MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L + +P + + +L+ +K + E+ F +++ G+ ++V
Sbjct: 581 -LAEEVYSGVIEPRAVLLKTLVLVC---SKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 413 QAYINAK--TPAYGIRDRMRADNVFPNKA 439
Y + A G+ D M+ P+ A
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMA 665
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 124/322 (38%), Gaps = 13/322 (4%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFS 164
G K + +MK G ++ N L+ KR ++ A V M+ + +
Sbjct: 257 GTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVT 316
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y L+D+ G+S+ +V+ M G P T L Y G ++A + +M
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWLDVCM--AAIEAWGKL 277
K +T LL + GK + I++ C+ N +C A I+ +G
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN----ICTFNAFIKMYGNR 432
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
K E +F ++ + LL V+ + M S+ + K+M +G +
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ L+ + G E+A ++ + P S+Y ++ A+ G +EK+ M
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAG-VTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 398 QVGYVARFKQFQTLVQAYINAK 419
+ +L+ AY N K
Sbjct: 552 DGRCKPNELTYCSLLHAYANGK 573
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I GK +V A +F + + L YT+L+ +A+ + ++ K+M E GC
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS-T 389
+ ++ ++ + + G + L++ + + P +Y ++ KRG +H
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEA 298
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
++F M+ G+ + L+ Y + P
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKKKVADVLLLMEKENVKLTQFSYKI 167
V KA V + MK++GF + N L+ ++ R D K ++L + + +K SY
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+I ++ + ++ M++ GI PD T Y + E+A +++ M
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Query: 228 LKEHRWTCRLLLPLYAELGKADQ 250
+ ++ T ++ Y +L + D+
Sbjct: 765 CRPNQNTYNSIVDGYCKLNRKDE 787
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 149/330 (45%), Gaps = 5/330 (1%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
F+ +V+ L+ +C N +A E F MK+KG T CN LL L+ +L++ + A V
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207
Query: 150 LLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
L M + +K + +++ I+I++ + L V M++ G++P+ T + Y
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLD 265
S GR E A+A+L M+ ++ +T L+ + G+ ++ ++I+ ++ + P
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ I+ + ++ A A M K + Y +L+ + + + ++K++
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E G + ++ L+ + +KA +L + KP +Y ++ +K+
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKA-FLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + +F ++ G + F L+ +
Sbjct: 447 MKEADDLFKKITSEGVLPDVIMFNALIDGH 476
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P ++ C + + + KLN+ E A ++ M + K S + ++ V L K KD
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
V M SG + ++ +V + G VE AD+IL ++Q K +P +Y ++
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPDSFTYGSLISGMC 302
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
K+G + KIF M Q G + TL+ + N
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN 338
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 151/354 (42%), Gaps = 7/354 (1%)
Query: 67 LDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF 124
++++ K L+KA+ ++ + S V Y T++ + V+ A+ + MK +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 125 PVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
SF L+ + K+ ++ + + M ++ ++ + Y LID +L
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ M +GI P ST L R ++AE M+KE++ + T +L+ Y
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYC 407
Query: 244 ELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
A + + ++ S P + + K N+++EA+ +FK+++
Sbjct: 408 RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVI 467
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+ AL+ + + + +L+K M + ++ +++ H G+VE+A L
Sbjct: 468 MFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE-LFDE 526
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ KP S+ ++ Y++RGDI ++ + M G+ + LVQ
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 11/237 (4%)
Query: 78 KAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
+AE I++I E +G + Y L+ N KKA + + M G T
Sbjct: 379 EAECMIKEIQE--KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436
Query: 134 LL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
LL +L K+ K+ D+ + E V + LID ++++ G ++++ M
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
+ PD T + + + G+ E+A + EM+ +K + L+ Y+ G
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 253 RIW-KLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRM-SKTWKKLSTKHYTAL 305
R+ ++ ++ NP + A ++ K + + AE + K M SK T ++T +
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613
>gi|115482780|ref|NP_001064983.1| Os10g0501000 [Oryza sativa Japonica Group]
gi|113639592|dbj|BAF26897.1| Os10g0501000, partial [Oryza sativa Japonica Group]
Length = 451
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 179/435 (41%), Gaps = 68/435 (15%)
Query: 4 PDISIHSTLTKYA-EEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
P + + L ++ E +++ E+ + L RR + +ALQLS W+ L D
Sbjct: 66 PRLPLSPVLEQWCLAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWMTERLHLHLSPGD 125
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
A+ L+LI K+ GL +A Y +P+ + + Y +LL N V+KAEE+F +M+
Sbjct: 126 VANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGM 185
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
G +S+A N ++ LY + GQ + M
Sbjct: 186 GM-ASSYAYNVMMRLYLQ-------------------------------NGQVERVHSMH 213
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
Q AM+ GI PD ST L V+ RK+K L
Sbjct: 214 Q---AMEESGIVPDVSTTHTL----VAVLRKKKT------------------------LV 242
Query: 243 AELGKADQVARIWKLCE-SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
A A+ + I + E +N + M I K+N + AE ++ ++
Sbjct: 243 AAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDSRL 302
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK-- 359
L+ Y ++ K + LV Q + G L + + G+V KA + K
Sbjct: 303 INLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKAL 362
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
A N++ P ++ ++ ++ +A++ ++ + E++ ++++ R + L++ Y+NA
Sbjct: 363 ASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTR-DIYHGLLKTYVNAG 421
Query: 420 TPAYGIRDRMRADNV 434
P + RM+ D +
Sbjct: 422 KPVSDLLHRMKKDGM 436
>gi|298572048|gb|ADI88021.1| PPR protein [Silene latifolia]
Length = 224
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
+V +++ M+++ + L +SY I + +G M+QV M + I P+ +T + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E+++ + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSTRGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMY 124
>gi|449515498|ref|XP_004164786.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 132/308 (42%), Gaps = 5/308 (1%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTL 99
Y +AL+ +ET ++A L+L K GL KAE Y ++P + L
Sbjct: 108 YERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPL 167
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENV 158
L V N +KAE +++D G V N+++ LY +KV V+ M++ +
Sbjct: 168 LHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNLI 227
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAE 217
SY + ++ + + ++ V E M ++ ++ ST LA Y+ G EKA
Sbjct: 228 PRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAF 287
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAW 274
A LKE E R L+ LYA L + V R+W K NP + +
Sbjct: 288 AALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCL 347
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
KL ++++AE VFK + + LL Y + +L K + L + G +
Sbjct: 348 VKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNPNY 407
Query: 335 LAWDALVK 342
W+ L++
Sbjct: 408 KTWEILME 415
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 154/350 (44%), Gaps = 10/350 (2%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM--EKENVKLTQFSYK 166
V +A ++F +MK+ G T+ N L+ + + + LL M + ENVK +Y
Sbjct: 108 VDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYN 167
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
ILI L V+ M + GI+PD T +A+ Y G E+AE ++ +M +
Sbjct: 168 ILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYN 227
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVAR-IWKLCE--SNPWLDVCMAAIEAWGKLNKVEEA 283
+K + TC +++ Y + G + R ++++ E +P V + I+ +
Sbjct: 228 IVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGV 287
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+ M + K ++ ++ ++ ++ +++ M ++G A+ L K
Sbjct: 288 DEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKG 347
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+V G+ KA++ LL + + +P + I+ + G + ++ +M ++G
Sbjct: 348 YVRAGQPRKAEA-LLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSP 406
Query: 404 RFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFR 451
K ++TL+ Y AK P A + M V P + VA DA+R
Sbjct: 407 NLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVA--DAWR 454
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 12/223 (5%)
Query: 77 QKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL 134
++AE I K+P + E +++ N+ +A RMK+ G N L
Sbjct: 215 ERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSL 274
Query: 135 LILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
+ Y D V + L LME+ +K ++ +++ + + +++ M GI
Sbjct: 275 IKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGI 334
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR 253
EPD +ILAK YV G+ KAEA+L M ++ + ++ + GK D R
Sbjct: 335 EPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMD---R 391
Query: 254 IWKLCE------SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
++LCE ++P L I +G+ + +AE + M
Sbjct: 392 AFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTM 434
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK--------------------- 307
A I A+ + KV+EA +F++M + K +T Y L+K
Sbjct: 97 AMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQD 156
Query: 308 ---------------VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ K L + +++ +M SG + ++ + + + + GE E+
Sbjct: 157 ENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETER 216
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
A+ ++LK N KP + +I+ Y K G++ + +RM+++G F +L+
Sbjct: 217 AERLILK-MPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLI 275
Query: 413 QAYINA 418
+ Y++
Sbjct: 276 KGYLDT 281
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K EA+AVF +++ K + YT L+ K L+ ++A++G + +
Sbjct: 37 KPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLN 96
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A++ E G+V++A I K ++ KP S+Y ++ + G + + K+ M Q
Sbjct: 97 AMINAFSESGKVDEAMKIFQKMKEYG-CKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQ 155
Query: 399 VGYV-ARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
V + + L+QA+ K A+ + +M A + P+
Sbjct: 156 DENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPD 197
>gi|449470082|ref|XP_004152747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27460-like [Cucumis sativus]
Length = 439
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 132/308 (42%), Gaps = 5/308 (1%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTL 99
+ +AL+ +ET ++A L+L K GL KAE Y ++P + L
Sbjct: 108 FERALEALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPL 167
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENV 158
L V N +KAE +++D G V N+++ LY +KV V+ M++ +
Sbjct: 168 LHGYVKERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQI 227
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAE 217
SY + ++ + + ++ V E M ++ ++ ST LA Y+ G EKA
Sbjct: 228 PRNVLSYNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAF 287
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAW 274
A LKE E R L+ LYA L + V R+W K NP + +
Sbjct: 288 AALKEAEKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCL 347
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
KL ++++AE VFK + + LL Y + +L K + L + G +
Sbjct: 348 VKLGEIDKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNPNY 407
Query: 335 LAWDALVK 342
W+ L++
Sbjct: 408 KTWEILME 415
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 141/348 (40%), Gaps = 38/348 (10%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+VY TL+ N V++AE +F MK KG T N L+ Y R + ++ + L+
Sbjct: 367 IVYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNILMYAYSRKMQPEIVEKLMAE 426
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGM--DQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M++ +K SY +I G+ +++ M D ++ MK +GI+P S + L Y
Sbjct: 427 MQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLK-MKKDGIKPTSHSYTALIHAYSVS 485
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
G EKA A + M+ + +K T LL + G + +IWKL
Sbjct: 486 GWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLM------------ 533
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ KVE F L+ +A H + +D++ + A G
Sbjct: 534 -----RREKVEGTRVTF---------------NTLVDGFAKHGYYKEARDVISKFANVGL 573
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
H + ++ L+ + GG K +L + N KP +Y ++ + + D
Sbjct: 574 HPTVMTYNMLMNAYARGGRHSKLPELLEEMAAHN-LKPDSVTYSTMIYAFLRVRDFSQAF 632
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNK 438
M + G V +Q L +A ++AK +DR V NK
Sbjct: 633 FYHQEMVKSGQVMDVDSYQKL-RAVLDAKAAIKNRKDRRSMIGVVRNK 679
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 160/418 (38%), Gaps = 44/418 (10%)
Query: 5 DISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYA 64
++++ L +Y EG +S E + L ++ L +W+ + + R
Sbjct: 172 NLTLEEALAEY--EGRRVSEKECWEVLKLLGDEQLLVCCLYFFQWMRSQEPSLVTPRACT 229
Query: 65 SCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
L+ K + K +P S FR VY ++ ++ + A +V+ M+
Sbjct: 230 VLFPLLGKAKMGDKLMVLFTNLPSSREFRDSHVYNAAISGLLSSARYEDAWKVYESMEAD 289
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
C+ ++I+ ++L D EK N K ++ ++L + +S + G+
Sbjct: 290 NVLPDHVTCSIMVIVMRKLG-HSAKDAWQFFEKMNGKGVKWGEEVLGALI-KSFCVEGLM 347
Query: 183 Q----VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
++ ++ +G+ ++ L Y R E+AE + EM+ +K T +L
Sbjct: 348 SEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNIL 407
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ A+ + + E E + M +T K +
Sbjct: 408 M--------------------------------YAYSRKMQPEIVEKLMAEMQETGLKPN 435
Query: 299 TKHYTALLKVYADHKMLSK-GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
K YT ++ Y K +S D +M + G ++ AL+ + G EKA +
Sbjct: 436 AKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHAYSVSGWHEKAYAAF 495
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Q++ KP +Y ++D + + GD + KI+ MR+ F TLV +
Sbjct: 496 ENMQREG-IKPSIETYTALLDAFRRAGDTQTLMKIWKLMRREKVEGTRVTFNTLVDGF 552
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 189/446 (42%), Gaps = 30/446 (6%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLD-------FIERD 62
S + K EEG ++S ++ + G A W + K++ + +
Sbjct: 366 SCVRKMKEEGIEMSLVTYSVIVGGFSKA---GNAEAADHWFDEAKRIHKTLNASIYGKII 422
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
YA C + +++AE+ ++++ E +Y T++ + KK VF R+K
Sbjct: 423 YAHC-----QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLK 477
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+ GF T L+ LY ++ K K +V +M++E VK +Y ++I+ + D
Sbjct: 478 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 537
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V E M EG++PD + + G ++A +KEM+ L+ HR T R +
Sbjct: 538 NAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQ--KLR-HRPTTRTFM 594
Query: 240 PLYAELGKADQVAR------IWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
P+ K+ + R + + C P + A I + ++E+A + M+
Sbjct: 595 PIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLA 654
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ YT +++ YA K + ++ G + ++AL+K + G ++ A
Sbjct: 655 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSA 714
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ + +N + F Y +++D +A+RGD+ + +M++ G + + +
Sbjct: 715 LAVTKEMSARNIPRNSF-VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 773
Query: 414 AYINAK--TPAYGIRDRMRADNVFPN 437
A A A + M A V PN
Sbjct: 774 ACSKAGDMNRATQTIEEMEALGVKPN 799
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 149/346 (43%), Gaps = 7/346 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSY 165
++ +A E F RM+ +G TS L+ Y D ++ + M++E ++++ +Y
Sbjct: 324 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY 383
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+++ ++ + D + K ++S + + E+AEA+++EME
Sbjct: 384 SVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 443
Query: 226 DNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ + ++ Y A+ K V + K C P + I + K+ K+ +
Sbjct: 444 EGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 503
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A V + M + K + K Y+ ++ + K + + + M + G + ++ ++
Sbjct: 504 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIA 563
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
G +++A + K Q+ + +P ++M I++ +AK GD+ + ++F MR+ G V
Sbjct: 564 AFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCV 622
Query: 403 ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQ 446
F L+ + + A I D M V N+ ++ Q
Sbjct: 623 PTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 668
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y LL C ++ A V M + P SF N L+ + +R D + AD++ M
Sbjct: 697 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 756
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+KE VK +Y I ++ D+ Q +E M++ G++P+ T L K +
Sbjct: 757 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 816
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLL 239
EKA + +EM+ LK + LL
Sbjct: 817 EKALSCYEEMKAVGLKPDKAVYHCLL 842
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 9/271 (3%)
Query: 68 DLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLA--NCVA-GNNVKKAEEVFNRMKDK 122
++IA G+ + IQ + E R RT + N A +++++ EVF+ M+
Sbjct: 560 NIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRC 619
Query: 123 GFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G T N L+ L ++ +K ++L M V + +Y ++ D
Sbjct: 620 GCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 679
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+ +++EG+E D T L K GR + A A+ KEM N+ + + +L+
Sbjct: 680 FEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 739
Query: 242 YAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+A G + A + + + P + + I A K + A + M K +
Sbjct: 740 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 799
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
K YT L+K +A + K ++M G
Sbjct: 800 IKTYTTLIKGWARASLPEKALSCYEEMKAVG 830
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 105/292 (35%), Gaps = 51/292 (17%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLL 151
E Y ++ + + KA E F R++++G V F LL + + + A V
Sbjct: 660 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTK 719
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M N+ F Y ILID + D+ +++ MK EG++PD T G
Sbjct: 720 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 779
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
+A ++EME +K P + I
Sbjct: 780 DMNRATQTIEEMEALGVK--------------------------------PNIKTYTTLI 807
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK------VYADHKMLSKGKDLVKQM 325
+ W + + E+A + ++ M K Y LL A+ + S + K+M
Sbjct: 808 KGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEM 867
Query: 326 AESGCHI---GPLAWD-ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSY 373
E+G + + W L K+ GGE L Q F P +SS+
Sbjct: 868 VEAGLIVDMGTAVHWSRCLCKIEGSGGE--------LTETLQKTFPPDWSSH 911
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
++ +G+ + A F+RM +++ YT+L+ YA + + + V++M E G
Sbjct: 317 VKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGI 376
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + + +V + G E AD +A++ +K S Y I+ + + ++ E
Sbjct: 377 EMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNA-SIYGKIIYAHCQTCNMERAE 435
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
+ M + G A + T++ Y
Sbjct: 436 ALVREMEEEGIDAPIAIYHTMMDGY 460
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 149/330 (45%), Gaps = 5/330 (1%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
F+ +V+ L+ +C N +A E F MK+KG T CN LL L+ +L++ + A V
Sbjct: 148 FKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWV 207
Query: 150 LLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
L M + +K + +++ I+I++ + L V M++ G++P+ T + Y
Sbjct: 208 LYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLD 265
S GR E A+A+L M+ ++ +T L+ + G+ ++ ++I+ ++ + P
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ I+ + ++ A A M K + Y +L+ + + + ++K++
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E G + ++ L+ + +KA +L + KP +Y ++ +K+
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKA-FLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + +F ++ G + F L+ +
Sbjct: 447 MKEADDLFKKITSEGVLPDAIMFNALIDGH 476
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P ++ C + + + KLN+ E A ++ M + K S + ++ V L K KD
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
V M SG + ++ +V + G VE AD+IL ++Q K +P +Y ++
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQ-KIEPDSFTYGSLISGMC 302
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
K+G + KIF M Q G + TL+ + N
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN 338
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 151/354 (42%), Gaps = 7/354 (1%)
Query: 67 LDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF 124
++++ K L+KA+ ++ + S V Y T++ + V+ A+ + MK +
Sbjct: 228 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 287
Query: 125 PVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
SF L+ + K+ ++ + + M ++ ++ + Y LID +L
Sbjct: 288 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 347
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ M +GI P ST L R ++AE M+KE++ + T +L+ Y
Sbjct: 348 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYC 407
Query: 244 ELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
A + + ++ S P + + K N+++EA+ +FK+++
Sbjct: 408 RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAI 467
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+ AL+ + + + +L+K M + ++ +++ H G+VE+A L
Sbjct: 468 MFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE-LFDE 526
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ KP S+ ++ Y++RGDI ++ + M G+ + LVQ
Sbjct: 527 MKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQG 580
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 11/237 (4%)
Query: 78 KAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
+AE I++I E +G + Y L+ N KKA + + M G T
Sbjct: 379 EAECMIKEIQE--KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436
Query: 134 LL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
LL +L K+ K+ D+ + E V + LID ++++ G ++++ M
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
+ PD T + + + G+ E+A + EM+ +K + L+ Y+ G
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 253 RIW-KLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRM-SKTWKKLSTKHYTAL 305
R+ ++ ++ NP + A ++ K + + AE + K M SK T ++T +
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 151/328 (46%), Gaps = 13/328 (3%)
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--ILYKRLDKKKVADVLLLMEKE 156
L A C AG+ + +AE V + M++ G P ++ N L +L R +K V +V M++E
Sbjct: 21 LRAYCTAGS-LHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAV-EVYQRMKRE 78
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+ +Y ++I++ G+S +V + M+S G + + T L + G EKA
Sbjct: 79 RCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKA 138
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAI 271
E + +EM+ + + L+ Y+ G + I+ L CE P +
Sbjct: 139 EEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCE--PDRASYNILV 196
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+A+G+ EAEAVF+ + + + K + LL +A +++ ++++ Q+ +SG
Sbjct: 197 DAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLA 256
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+A +A++ + G ++ + +L A + + +Y + ++ Y + G + E
Sbjct: 257 PDTIALNAMLNAYGRAGRLDDMERLL--AAMERRGTRDVGTYNVAVNAYGRAGYLERMEA 314
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAK 419
F + + G A + + + AY K
Sbjct: 315 AFASLERRGLAADVVTWTSRMGAYARKK 342
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 118/272 (43%), Gaps = 4/272 (1%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEK 155
T L N A + +KAEEVF M+ G +A N L+ Y R + A ++ LM+
Sbjct: 123 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQH 182
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY IL+D G++ + V E++K +G+ P + +L + G +
Sbjct: 183 MGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVAR 242
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM--AAIEA 273
E ++ ++ L +L Y G+ D + R+ E DV A+ A
Sbjct: 243 CEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTRDVGTYNVAVNA 302
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ +E EA F + + +T+ + YA K + ++ ++M ++GC+
Sbjct: 303 YGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVDAGCYPD 362
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
LV + +VE+ +I+ ++ K
Sbjct: 363 AGTAKVLVAACSDERQVEQVTAIVRSMHKEAK 394
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 33/224 (14%)
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
P T A+L + Y + G +AE ++ EM +EH +P A +
Sbjct: 12 PTEDTYALLLRAYCTAGSLHRAEGVISEM-----REHG------IPPSATV--------- 51
Query: 255 WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
N +LD + K E+A V++RM + + +T+ YT ++ VY K
Sbjct: 52 -----YNAYLDGLL-------KARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQ 99
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
+ K+M GC + ALV G EKA+ + + QQ +P +Y
Sbjct: 100 PMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEV-FEEMQQAGHEPDVYAYN 158
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+M+ Y++ G + +IF M+ +G + LV AY A
Sbjct: 159 ALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYGRA 202
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 166/368 (45%), Gaps = 10/368 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + + +L+ S + K+ E+ +++ ++ V +A ++F +MK
Sbjct: 81 YTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMK 140
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDL 178
+ G T+ N L+ + + + A LL +++ NVK + +Y ILI N+L
Sbjct: 141 ECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNEL 200
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN--LKEHRWTCR 236
V+ M + G++PD T LA+ + G + AE ++ +M+ N +K + TC
Sbjct: 201 EEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCG 260
Query: 237 LLLPLYAELGKADQVAR-IWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
+++ Y + G + R ++K+ E +P V + I+ + + + E M +
Sbjct: 261 IIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF 320
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K Y+ ++ ++ ++ +++ M ++ A+ L K +V G+ +KA
Sbjct: 321 GIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKA 380
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ LL + + + + I+ + G + +++ +M ++G K ++TL+
Sbjct: 381 EA-LLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIW 439
Query: 414 AYINAKTP 421
Y AK P
Sbjct: 440 GYGEAKQP 447
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K EA +F +++ K + YT L+ K + L+ ++ E+G + ++
Sbjct: 58 KPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFN 117
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A++ + G+V +A I K ++ KP S++ ++ + G H K+ M Q
Sbjct: 118 AMINAFSDSGKVHEAMKIFRKMKECG-CKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQ 176
Query: 399 VGYV-ARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPN 437
G V + + L+QA+ N A+ + +M + P+
Sbjct: 177 DGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPD 218
>gi|298572050|gb|ADI88022.1| PPR protein [Silene latifolia]
Length = 224
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
+V +++ M+++ + L +SY I + +G M+QV M + I P+ +T + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G+ EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGQLEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPNIPNWG 186
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E+++ + L+
Sbjct: 11 YGALLNAYVGAKIRDKAETLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMY 124
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 151/322 (46%), Gaps = 11/322 (3%)
Query: 134 LLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ Y +L D + VL M K+ K + S L++ G++ + V M++ G
Sbjct: 148 LVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSG 207
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD---NLKEHRWTCRLLLPLYAELGKAD 249
EP + T I+ K +V G + ++AEA+ +++ + + K + +++ +Y + G
Sbjct: 208 PEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYA 267
Query: 250 QVARIW-KLCESN-PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
Q +++ ++ E P V ++ ++ +E +++ +M +T K Y+ L+K
Sbjct: 268 QARKLFAQMSERGIPLSTVTFNSLMSFE--TNYKEVSSIYDQMQRTALKPDVVSYSLLIK 325
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
Y + + + ++M ++G +++ L+ G VE+A ++ KA ++++ +
Sbjct: 326 AYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTV-FKAMRRHRVE 384
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGI 425
P SY ++ Y D+ EK F R+++ G + TL++ Y +N +
Sbjct: 385 PDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRV 444
Query: 426 RDRMRADNVFPNKALAAQVAQV 447
+RMR V PN+ + + V
Sbjct: 445 YERMRMQGVEPNQTIYTTIMDV 466
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 242 YAELGKADQVARIWKLCESNPW-----LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ +L K + V+ I + + W +D M + A+GKL AE V K M+K K
Sbjct: 116 FKQLKKWNLVSEILEWLRTQHWWNFSEMDFLML-VTAYGKLGDFSRAERVLKYMNKKGYK 174
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
S TAL++ Y K K + + ++M SG + + ++K VEG + ++A++I
Sbjct: 175 PSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAI 234
Query: 357 L--LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L +++ FKP + +++ Y K GD K+F +M + G F +L+
Sbjct: 235 FEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSF 294
Query: 415 YINAKTPAYGIRDRMRADNVFPN 437
N K + I D+M+ + P+
Sbjct: 295 ETNYKEVS-SIYDQMQRTALKPD 316
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 162/386 (41%), Gaps = 16/386 (4%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLANC 103
++ EWL T +F E D+ + KL +AE ++ + + ++ V+ +T L
Sbjct: 127 EILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEA 186
Query: 104 VA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL---LLMEKE-NV 158
+KAE VF RM+ G ++ +L + DK K A+ + LL EK +
Sbjct: 187 YGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASF 246
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K Q + ++I + ++ D ++ M GI + T L + ++ +
Sbjct: 247 KPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETN---YKEVSS 303
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMAAIEAWG 275
+ +M+ LK + LL+ Y + + ++ ++ ++ ++ P I+A+
Sbjct: 304 IYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFA 363
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
VEEA VFK M + + YT ++ Y + + + +++ E G +
Sbjct: 364 ISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVV 423
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
+ L+K + + VE+ + + + Q +P + Y IMD + + D + F
Sbjct: 424 VYGTLMKGYSKLNNVERVMRVYERMRMQG-VEPNQTIYTTIMDVHGRNSDFGNAVIWFKE 482
Query: 396 MRQVGYVARFKQFQTLVQAYINAKTP 421
M GY A K L+ AKTP
Sbjct: 483 MEARGYPADKKAKNILLSL---AKTP 505
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 113/268 (42%), Gaps = 5/268 (1%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
+A ++F +M ++G P+++ N L+ + K+V+ + M++ +K SY +LI
Sbjct: 268 QARKLFAQMSERGIPLSTVTFNSLMSF--ETNYKEVSSIYDQMQRTALKPDVVSYSLLIK 325
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
G++ V E M G+ P + IL + G E+A + K M ++
Sbjct: 326 AYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEP 385
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVF 287
+ ++ Y D + ++ + + P + V ++ + KLN VE V+
Sbjct: 386 DLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVY 445
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+RM + + YT ++ V+ + K+M G A + L+ L
Sbjct: 446 ERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILLSLAKTP 505
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYML 375
E E+A+ + Q + KP ++Y L
Sbjct: 506 EEQEEANELTGNCAIQLEAKPDGTTYGL 533
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 148/334 (44%), Gaps = 17/334 (5%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDK-KKVADVLL 151
+Y T++ N +K VF+R+K+ GF V S+ C L+ LY ++ K K +V
Sbjct: 431 IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGC--LINLYIKIGKVSKALEVSK 488
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ME +K +Y +LI+ + D V E + +G++PD + + + G
Sbjct: 489 MMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMG 548
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
++A +KEM+ + HR T R +P+ ++ + R ++ + W C+ +
Sbjct: 549 NMDRAIRTVKEMQKE---RHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRW-SGCIPTV 604
Query: 272 EAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ L ++E+A + MS + YT ++ YA K + +
Sbjct: 605 HTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTK 664
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
+ G + ++AL+K + G ++ A ++ + Q + F Y +++D +A+RG
Sbjct: 665 LKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF-VYNILIDGWARRG 723
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
D+ ++ +M+Q G + + + A A
Sbjct: 724 DVWEAAELMQQMKQEGVQPDIHTYTSFINACCKA 757
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 137/347 (39%), Gaps = 36/347 (10%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
VY +L+ G ++++A +MK++G ++ + L+ + ++ + AD
Sbjct: 326 VYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEA 385
Query: 155 KE-NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
KE + L Y +I Q+ ++T + +V M+ EGI+ + Y G +
Sbjct: 386 KERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNE 445
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
EK + D LKE C P + I
Sbjct: 446 EKCLIVF-----DRLKE---------------------------CGFTPSVISYGCLINL 473
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K+ KV +A V K M K + K Y+ L+ + K + + + + + G
Sbjct: 474 YIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPD 533
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+ ++ +++ G +++A +K Q+ + +P ++M I+ +A+ GD+ +IF
Sbjct: 534 VVLYNNIIRAFCGMGNMDRAIRT-VKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIF 592
Query: 394 HRMRQVGYVARFKQFQTLVQAYIN--AKTPAYGIRDRMRADNVFPNK 438
MR G + F L+ + A I D M + PN+
Sbjct: 593 DMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNE 639
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEV-VYRTLLANCVAGNNVKKAEEVFN 117
E Y + + A L KA Y K+ E +V Y LL C ++ A V
Sbjct: 639 EHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTR 698
Query: 118 RMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M + P +F N L+ + +R D + A+++ M++E V+ +Y I+ ++
Sbjct: 699 EMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAG 758
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D+ + ++ M+ G++P+ T L + EKA +EM+ LK
Sbjct: 759 DMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLK 811
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 52/291 (17%), Positives = 111/291 (38%), Gaps = 40/291 (13%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K ++ + +++ + D+ E+M++ GIEP S L Y G E+A +
Sbjct: 286 KPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 345
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
+++M+ + ++ T +L+ +A++ A
Sbjct: 346 CVRKMKEEGIEMSLVTYSILVGGFAKIADA------------------------------ 375
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
E A+ FK + L+ Y ++ + +++ + LV++M E G +
Sbjct: 376 --EAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYH 433
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + G EK I+ ++ F P SY +++ Y K G + ++ M
Sbjct: 434 TMMDGYTIIGNEEKC-LIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEV 492
Query: 399 VGYVARFKQFQTLVQAYINAKTPAYG-------IRDRMRADNVFPNKALAA 442
G K + L+ ++ K A ++D ++ D V N + A
Sbjct: 493 AGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRA 543
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 171/394 (43%), Gaps = 36/394 (9%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE-SFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMK 120
YA C ++ + +AE+ ++++ E + +Y T++ N +K VF+R+K
Sbjct: 397 YAHC-----QICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLK 451
Query: 121 DKGF--PVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
+ GF V S+ C L+ LY ++ K K ++ +M+ +K +Y +LI+ + D
Sbjct: 452 ECGFFPSVISYGC--LINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKD 509
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
V E +G++PD + + G ++A M+++M+ + HR T R
Sbjct: 510 WANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKE---RHRPTTRT 566
Query: 238 LLPLYAELGKADQVARIWKLCESNPWLDV-----CMAAIEAWGKL-------NKVEEAEA 285
LP+ +A ++ R ++ D+ C+ + + L ++ +A A
Sbjct: 567 FLPIIHGFARAGEMRRALEI------FDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVA 620
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+ M+ + YT L++ YA K + G I ++AL+K
Sbjct: 621 ILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCC 680
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
+ G ++ A ++ + +N + F Y +++D +A+RGD+ + +MR+ G +
Sbjct: 681 KSGRMQSALAVTKEMSAKNIPRNTF-VYNILIDGWARRGDVWEAADLMQQMRKEGLLPDI 739
Query: 406 KQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
+ + + A A A I M A + PN
Sbjct: 740 HTYTSFINACCKAGDMQKATEIIQEMEASGIKPN 773
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/346 (17%), Positives = 146/346 (42%), Gaps = 7/346 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSY 165
++ A + F M+ +G +S + L+ Y D ++ + M++E +++T +Y
Sbjct: 298 GDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTY 357
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I++ + + D E K + ++ + + ++AEA+++EME
Sbjct: 358 SIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEE 417
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ ++ Y +G ++ ++ K C P + I + K+ KV +
Sbjct: 418 QGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSK 477
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A + K M + K + K Y+ L+ + K + + + + G + ++ ++
Sbjct: 478 ALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIIT 537
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
G +++A +++ Q+ + +P +++ I+ +A+ G++ +IF MR+ G +
Sbjct: 538 AFCGMGNMDRA-ICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCI 596
Query: 403 ARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQ 446
+ L+ + + T A I D M V PN+ + Q
Sbjct: 597 PTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQ 642
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 4/225 (1%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKI 167
+++A E+F+ M+ G T N L++ L ++ K +L M V + +Y
Sbjct: 580 MRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTT 639
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
L+ D Q +++EG+E D T L K GR + A A+ KEM N
Sbjct: 640 LMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKN 699
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAE 284
+ + + +L+ +A G + A + + P + + I A K +++A
Sbjct: 700 IPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKAT 759
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ + M + K + K YT L+ +A M K ++M +G
Sbjct: 760 EIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAG 804
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 113/255 (44%), Gaps = 6/255 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +++ G+ D+ Q E+M++ GIEP S + L Y G E+A +++M+
Sbjct: 287 YGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 346
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW--KLCESNPWLDVCM--AAIEAWGKLNKV 280
+ ++ T +++ +A++G AD A W + E P L+ + I A ++ +
Sbjct: 347 EEGIEMTIVTYSIIVGGFAKMGNAD-AADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNM 405
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
+ AEA+ + M + Y ++ Y K + ++ E G +++ L
Sbjct: 406 DRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCL 465
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ L+ + G+V KA I K + + K +Y ++++ + K D + +F + G
Sbjct: 466 INLYTKVGKVSKALEI-SKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDG 524
Query: 401 YVARFKQFQTLVQAY 415
+ ++ A+
Sbjct: 525 LKPDVVLYNNIITAF 539
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 4/205 (1%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTL 99
+AL++ + + + + + A L L+ K R + KA + + ++ + G E Y TL
Sbjct: 582 RALEIFDMMRRSGCIPTVHTYNALILGLVEK-RQMTKAVAILDEMNVAGVGPNEHTYTTL 640
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENV 158
+ + + +KA + F ++++G + + LL + + + A V M +N+
Sbjct: 641 MQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNI 700
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
F Y ILID + D+ +++ M+ EG+ PD T G +KA
Sbjct: 701 PRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATE 760
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYA 243
+++EME +K + T L+ +A
Sbjct: 761 IIQEMEASGIKPNLKTYTTLINGWA 785
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 155/390 (39%), Gaps = 41/390 (10%)
Query: 39 MYGKALQLSEWLETNK--KLDFIERD---YASCLDLIAKLRGLQKAESYIQKIP-ESFRG 92
+Y K ++S+ LE +K K+ I+ + Y+ ++ KL+ A S + + +
Sbjct: 468 LYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKP 527
Query: 93 EVV-YRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL 150
+VV Y ++ A C GN + V K++ P T + + + ++ ++
Sbjct: 528 DVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIF 587
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
+M + T +Y LI + +T +++ M G+ P+ T L + Y S
Sbjct: 588 DMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASL 647
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
G EKA + + L+ +T LL K C C
Sbjct: 648 GDTEKAFQYFTVLRNEGLEIDVYTYEALL----------------KSC--------C--- 680
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
K +++ A AV K MS +T Y L+ +A + + DL++QM + G
Sbjct: 681 -----KSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGL 735
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + + + G+++KA I ++ + + KP +Y +++ +A+
Sbjct: 736 LPDIHTYTSFINACCKAGDMQKATEI-IQEMEASGIKPNLKTYTTLINGWARASMPEKAL 794
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
F M+ G+ + LV + ++ T
Sbjct: 795 SCFEEMKLAGFKPDKAVYHCLVTSLLSRAT 824
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 127/273 (46%), Gaps = 19/273 (6%)
Query: 74 RGLQKAESYI-QKIPESFRGE-----VVYRTLLANCVAGNNV-KKAEEVFNRMKDKGFPV 126
R +Q+++S++ Q I + R + + T L N +A + +KAEE+F +M++ G+
Sbjct: 5 RFVQESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEP 64
Query: 127 TSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+A N L+ Y R A++ LM+ + + SY I++D G++ V
Sbjct: 65 DVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVF 124
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E MK GI P + +L Y S G K E ++ +M LK + +L LY L
Sbjct: 125 EEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRL 184
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH---- 301
G+ ++ ++ + P C A I + L V +RM + ++ L K+
Sbjct: 185 GQFGKMEDLFSTMQKGP----CRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPD 240
Query: 302 ---YTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+T+ + Y+ K+ + +L ++M ++GC+
Sbjct: 241 VVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCY 273
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 100/216 (46%), Gaps = 8/216 (3%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+++ +P+ T L G EKAE + ++M+ + + L+ Y+
Sbjct: 18 IFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYS 77
Query: 244 ELGKADQVARIWKL-----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
G A I+ L CE + M ++A+G+ E+A+AVF+ M + +
Sbjct: 78 RAGFPYGAAEIFSLMQHMGCEPDRASYNIM--VDAYGRAGLHEDAQAVFEEMKRIGITPT 135
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
K + LL Y+ ++K +D++ QM +SG ++++ L+ G+ K + L
Sbjct: 136 MKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMED-LF 194
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
Q+ + S+Y ++++ Y + G + E++F
Sbjct: 195 STMQKGPCRADISTYNILINVYGRAGFVERMEELFQ 230
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+K A+ +F M K + +TAL+ A + K +++ +QM E+G A+
Sbjct: 10 SKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAY 69
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+AL++ + G A I Q +P +SY +++D Y + G + +F M+
Sbjct: 70 NALMESYSRAGFPYGAAEIF-SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMK 128
Query: 398 QVGYVARFKQFQTLVQAYINAKTPA 422
++G K L+ AY +A A
Sbjct: 129 RIGITPTMKSHMLLLSAYSSAGNVA 153
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 148/334 (44%), Gaps = 17/334 (5%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDK-KKVADVLL 151
+Y T++ N +K VF+R+K+ GF V S+ C L+ LY ++ K K +V
Sbjct: 410 IYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGC--LINLYIKIGKVSKALEVSK 467
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ME +K +Y +LI+ + D V E + +G++PD + + + G
Sbjct: 468 MMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMG 527
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
++A +KEM+ + HR T R +P+ ++ + R ++ + W C+ +
Sbjct: 528 NMDRAIRTVKEMQKE---RHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRW-SGCIPTV 583
Query: 272 EAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ L ++E+A + MS + YT ++ YA K + +
Sbjct: 584 HTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTK 643
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
+ G + ++AL+K + G ++ A ++ + Q + F Y +++D +A+RG
Sbjct: 644 LKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTF-VYNILIDGWARRG 702
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
D+ ++ +M+Q G + + + A A
Sbjct: 703 DVWEAAELMQQMKQEGVQPDIHTYTSFINACCKA 736
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 137/347 (39%), Gaps = 36/347 (10%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
VY +L+ G ++++A +MK++G ++ + L+ + ++ + AD
Sbjct: 305 VYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEA 364
Query: 155 KE-NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
KE + L Y +I Q+ ++T + +V M+ EGI+ + Y G +
Sbjct: 365 KERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNE 424
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
EK + D LKE C P + I
Sbjct: 425 EKCLIVF-----DRLKE---------------------------CGFTPSVISYGCLINL 452
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K+ KV +A V K M K + K Y+ L+ + K + + + + + G
Sbjct: 453 YIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPD 512
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+ ++ +++ G +++A +K Q+ + +P ++M I+ +A+ GD+ +IF
Sbjct: 513 VVLYNNIIRAFCGMGNMDRAIRT-VKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIF 571
Query: 394 HRMRQVGYVARFKQFQTLVQAYIN--AKTPAYGIRDRMRADNVFPNK 438
MR G + F L+ + A I D M + PN+
Sbjct: 572 DMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNE 618
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEV-VYRTLLANCVAGNNVKKAEEVFN 117
E Y + + A L KA Y K+ E +V Y LL C ++ A V
Sbjct: 618 EHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTR 677
Query: 118 RMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M + P +F N L+ + +R D + A+++ M++E V+ +Y I+ ++
Sbjct: 678 EMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAG 737
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D+ + ++ M+ G++P+ T L + EKA +EM+ LK
Sbjct: 738 DMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLK 790
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 51/285 (17%), Positives = 108/285 (37%), Gaps = 40/285 (14%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
+ +++ + D+ E+M++ GIEP S L Y G E+A + +++M+
Sbjct: 271 FGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMK 330
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAE 284
+ ++ T +L+ +A++ A E A+
Sbjct: 331 EEGIEMSLVTYSILVGGFAKIADA--------------------------------EAAD 358
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
FK + L+ Y ++ + +++ + LV++M E G + ++ +
Sbjct: 359 HWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGY 418
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
G EK I+ ++ F P SY +++ Y K G + ++ M G
Sbjct: 419 TIIGNEEKC-LIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHN 477
Query: 405 FKQFQTLVQAYINAKTPAYG-------IRDRMRADNVFPNKALAA 442
K + L+ ++ K A ++D ++ D V N + A
Sbjct: 478 MKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRA 522
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 155/367 (42%), Gaps = 18/367 (4%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIP-ESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y + LD + R L + ++ + +VV T+L + C AGN +A + M
Sbjct: 333 YITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGN-FGEAFAKLDVM 391
Query: 120 KDKGFPVTSFACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
+D+G N L L+ RLD ++ ME VK T ++Y + ID G+S
Sbjct: 392 RDQGILPNLHTYNTLICGLLRVHRLDD--ALEIFDNMESLGVKPTAYTYIVFIDYYGKSG 449
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D + E MK++GI P+ GR +A+ + ++ L T
Sbjct: 450 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYN 509
Query: 237 LLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
+++ Y+++G+ D+ ++ CE P + V + I K ++V+EA +F RM
Sbjct: 510 MMMKCYSKVGEIDEAIKLLSEMVENCCE--PDVIVVNSLINTLYKADRVDEAWKMFMRMK 567
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K + Y LL + + + +L + M + GC + ++ L + EV
Sbjct: 568 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 627
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
A +L K +F+ Y I+ K G + FH+M+++ Y F TL
Sbjct: 628 LALKMLFKMMDMGCVPDVFT-YNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTL 685
Query: 412 VQAYINA 418
+ + A
Sbjct: 686 LPGVVKA 692
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 140/350 (40%), Gaps = 12/350 (3%)
Query: 107 NNVKKAEEVFNRM-KDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFS 164
NN A +F + KD G N L+ D ++A DV L ++ +
Sbjct: 765 NNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVAT 824
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y L+D G+S + + ++ + M + EP++ T I+ V G + A + ++
Sbjct: 825 YNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLM 884
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES------NPWLDVCMAAIEAWGKLN 278
D ++ T PL L K+ ++ +L E P + I +GK
Sbjct: 885 SD--RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAG 942
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ + A A+FKRM K + K Y+ L+ + +G +++ ESG + + ++
Sbjct: 943 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYN 1002
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + +E+A + + ++ P +Y ++ G + KI++ +++
Sbjct: 1003 LIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1062
Query: 399 VGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
G F L++ Y + P AY + M PN Q+
Sbjct: 1063 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 143/355 (40%), Gaps = 7/355 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
+ C+ ++ + + +A ++++ + G V Y L+ + A+EVF +MK
Sbjct: 263 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMK 322
Query: 121 DKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
LL + D V MEK+ ++ IL+D ++ +
Sbjct: 323 TGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 382
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
++ M+ +GI P+ T L + R + A + ME +K +T + +
Sbjct: 383 EAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFI 442
Query: 240 PLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
Y + G + ++ ++ P + C A++ + K + EA+ +F +
Sbjct: 443 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 502
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ Y ++K Y+ + + L+ +M E+ C + ++L+ + V++A +
Sbjct: 503 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKM 562
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
++ ++ K KP +Y ++ K G I ++F M Q G F TL
Sbjct: 563 FMRMKEM-KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 616
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 6/262 (2%)
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHY-VSGGRKEKAEAMLKEME-GDNLKEHRWTCRLL 238
M V + M+ I+ D++T + K V GG ++ A+ K E G L + + +
Sbjct: 139 MAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIH 198
Query: 239 LPLYAEL-GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
L L + +A +V R L P L + + GK +E + K M K
Sbjct: 199 LLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKP 258
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ +T ++V +++ +++K+M + GC + + L+ +++ A +
Sbjct: 259 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 318
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
K + + KP +Y+ ++D+++ D+ S + + M + G+V F LV A
Sbjct: 319 AK-MKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCK 377
Query: 418 AKT--PAYGIRDRMRADNVFPN 437
A A+ D MR + PN
Sbjct: 378 AGNFGEAFAKLDVMRDQGILPN 399
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 169/428 (39%), Gaps = 20/428 (4%)
Query: 1 MDAPDI-SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFI 59
M PD S S A N + E M L R+ GK +++ + +K I
Sbjct: 95 MSFPDTDSSFSYFKSVAGNSNLVHTTETCNYM--LEALRVDGKIEEMAYVFDLMQK-RII 151
Query: 60 ERDYASCLDLIAKLR---GLQKAESYIQKIPESFRGEVV----YRTLLANCVAGNNVKKA 112
+RD + L + L GL++A ++K+ E G V+ Y L+ + +A
Sbjct: 152 KRDTNTYLTIFKCLSVKGGLRQAPFALRKMREF--GFVLNAYSYNGLIHLLLKSRFCTEA 209
Query: 113 EEVFNRMKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDI 171
EV+ RM GF P + ++ L KR D + V +L ME +K +++ I I +
Sbjct: 210 MEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRV 269
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
G++ + ++++ M EG PD T +L + + + A+ + +M+ K
Sbjct: 270 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPD 329
Query: 232 RWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFK 288
R T LL +++ D V + W E + P + ++A K EA A
Sbjct: 330 RVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLD 389
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M + Y L+ L ++ M G + P A+ +V + G
Sbjct: 390 VMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLG--VKPTAYTYIVFIDYYGK 447
Query: 349 EVEKADSI-LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+ ++ + + P + + AK G ++IF+ ++ +G V
Sbjct: 448 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 507
Query: 408 FQTLVQAY 415
+ +++ Y
Sbjct: 508 YNMMMKCY 515
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 139/406 (34%), Gaps = 81/406 (19%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--------------ILYK 139
V Y TLLA +++A E+F M KG P + N L +L+K
Sbjct: 576 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 635
Query: 140 RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM-----KSEGIE 194
+D V DV F+Y +I L QV EAM + +
Sbjct: 636 MMDMGCVPDV-------------FTYNTII------FGLVKNGQVKEAMCFFHQMKKLVY 676
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAML----------------KEMEGDNLKE-------- 230
PD T L V G E A ++ +++ G L E
Sbjct: 677 PDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVS 736
Query: 231 ------HRWTCR----LLLPLYAELGKADQVARIWKLCES-------NPWLDVCMAAIEA 273
CR +L+P+ K + + L E P L I
Sbjct: 737 FSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGG 796
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ + +E A+ VF ++ T Y LL Y + + ++ K+M+ C
Sbjct: 797 LLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPN 856
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+ + ++ V+ G V+ A + F P +Y ++D +K G ++ +++F
Sbjct: 857 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 916
Query: 394 HRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPN 437
M G + L+ + A A + RM + V P+
Sbjct: 917 EGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 962
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 69/175 (39%), Gaps = 3/175 (1%)
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ C +EA K+EE VF M K K T Y + K + L + +++
Sbjct: 121 ETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRK 180
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M E G + +++ L+ L ++ +A + + + F+P +Y +M KR
Sbjct: 181 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEV-YRRMILDGFRPSLQTYSSLMVGLGKRR 239
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
DI S + M +G F ++ A AY I RM + P+
Sbjct: 240 DIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 294
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 181/406 (44%), Gaps = 35/406 (8%)
Query: 12 LTKYAEEGNDLSRAEIALAMANL-RTRRMYGKALQLSEWLETNKKLDFI----------- 59
+ ++ ++G D+ A+I ++ N+ T ++ + ++ NKK D I
Sbjct: 112 ILEFVQKGTDV--AKIWESLDNIPSTHNLFDDLVNVAVQFRMNKKWDLIIPVCEWILYRS 169
Query: 60 -ERDYASCLDLI----AKLRGLQKAESYIQKIPES--FRGEVVYRTLL-ANCVAGNNVKK 111
R C +L+ K R L KAES + E+ E Y LL A C AG+ + +
Sbjct: 170 SFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGS-LHR 228
Query: 112 AEEVFNRMKDKGFPVTSFACNQLL--ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILI 169
AE V + M++ G P + N L +L R +K V +V M++E + ++ ++I
Sbjct: 229 AEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAV-EVYQRMKRERCRANTETFTLMI 287
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
++ G++ +V MKS G +P+ T L + G EKAE + +EM+ +
Sbjct: 288 NVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHE 347
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWGKLNKVEEAE 284
+ L+ Y+ G + I+ L CE P ++A+G+ E+AE
Sbjct: 348 PDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCE--PDRASYNILVDAYGRAGLHEDAE 405
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
AVF+ + + + K + LL +A ++ ++++ Q+ +SG A +A++ +
Sbjct: 406 AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAY 465
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
G ++ + + A + + +Y + ++ Y + G + E
Sbjct: 466 ARAGRLDDMERLF--AAMERRGDADVGTYNVAVNAYGRAGYVGRME 509
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 8/274 (2%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEEVF M+ G +A N L+ Y R + +++ LM+
Sbjct: 319 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 378
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY IL+D G++ + V E +K G+ P + +L + G +
Sbjct: 379 MGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATR 438
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM--AAIEA 273
E ++ ++ L + +L YA G+ D + R++ E DV A+ A
Sbjct: 439 CEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDADVGTYNVAVNA 498
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ V EA F ++ +TA + YA K + +V++M ++GC+
Sbjct: 499 YGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCY-- 556
Query: 334 PLAWDALVKLHVEGGE--VEKADSILLKAQQQNK 365
P A A V L E VE+ +I+ ++ K
Sbjct: 557 PDAGTARVLLAACSDERQVEQVTAIVRSMHKKPK 590
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 110/295 (37%), Gaps = 72/295 (24%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +LI+ G+ L + + A+ P T A+L + Y + G +AE ++ EM
Sbjct: 178 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEM- 236
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAE 284
+EH +P A + N +LD + K E+A
Sbjct: 237 ----REHG------IPPNATV--------------YNAYLDGLL-------KARCTEKAV 265
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
V++RM + + +T+ +T ++ VY K + +M GC
Sbjct: 266 EVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGC-------------- 311
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
KP +Y +++ +A+ G E++F M+Q G+
Sbjct: 312 ----------------------KPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 349
Query: 405 FKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
+ L++AY A P A I M+ P++ A+ VDA+ + + E
Sbjct: 350 VYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDR--ASYNILVDAYGRAGLHE 402
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 182/406 (44%), Gaps = 35/406 (8%)
Query: 12 LTKYAEEGNDLSRAEIALAMANL-RTRRMYGKALQLSEWLETNKKLDFI----------- 59
+ ++ ++G D+ A+I ++ N+ T ++ + ++ NKK D I
Sbjct: 255 ILEFVQKGTDV--AKIWESLDNIPSTHNLFDDLVNVAVQFRMNKKWDLIIPVCEWILYRS 312
Query: 60 -ERDYASCLDLI----AKLRGLQKAESYIQKIPES--FRGEVVYRTLL-ANCVAGNNVKK 111
R C +L+ K R L KAES + E+ E Y LL A C AG+ + +
Sbjct: 313 SFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGS-LHR 371
Query: 112 AEEVFNRMKDKGFPVTSFACNQLL--ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILI 169
AE V + M++ G P + N L +L R +K V +V M++E + ++ ++I
Sbjct: 372 AEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAV-EVYQRMKRERCRANTETFTLMI 430
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
++ G++ +V MKS G +P+ T L + G EKAE + +EM+ +
Sbjct: 431 NVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHE 490
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWGKLNKVEEAE 284
+ L+ Y+ G + I+ L CE P ++A+G+ E+AE
Sbjct: 491 PDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCE--PDRASYNILVDAYGRAGLHEDAE 548
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
AVF+ + + + K + LL +A ++ ++++ Q+ +SG A +A++ +
Sbjct: 549 AVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAY 608
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
G ++ + +L A + + +Y + ++ Y + G + E
Sbjct: 609 ARAGRLDDMERLL--AAMERRGDADVGTYNVAVNAYGRAGYVGRME 652
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 8/274 (2%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEEVF M+ G +A N L+ Y R + +++ LM+
Sbjct: 462 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 521
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY IL+D G++ + V E +K G+ P + +L + G +
Sbjct: 522 MGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATR 581
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM--AAIEA 273
E ++ ++ L + +L YA G+ D + R+ E DV A+ A
Sbjct: 582 CEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRGDADVGTYNVAVNA 641
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ V EA F ++ +TA + YA K + +V++M ++GC+
Sbjct: 642 YGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCY-- 699
Query: 334 PLAWDALVKLHVEGGE--VEKADSILLKAQQQNK 365
P A A V L E VE+ +I+ ++ K
Sbjct: 700 PDAGTARVLLAACSDERQVEQVTAIVRSMHKKPK 733
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 110/295 (37%), Gaps = 72/295 (24%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +LI+ G+ L + + A+ P T A+L + Y + G +AE ++ EM
Sbjct: 321 YNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEM- 379
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAE 284
+EH +P A + N +LD + K E+A
Sbjct: 380 ----REHG------IPPNATV--------------YNAYLDGLL-------KARCTEKAV 408
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
V++RM + + +T+ +T ++ VY K + +M GC
Sbjct: 409 EVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGC-------------- 454
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
KP +Y +++ +A+ G E++F M+Q G+
Sbjct: 455 ----------------------KPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPD 492
Query: 405 FKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
+ L++AY A P A I M+ P++ A+ VDA+ + + E
Sbjct: 493 VYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDR--ASYNILVDAYGRAGLHE 545
>gi|125575301|gb|EAZ16585.1| hypothetical protein OsJ_32057 [Oryza sativa Japonica Group]
Length = 400
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 176/424 (41%), Gaps = 75/424 (17%)
Query: 18 EGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQ 77
E +++ E+ + L RR + +ALQLS W+ L D A+ L+LI K+ GL
Sbjct: 30 EERHVAKPEVQSIIKYLCRRRRFSQALQLSMWMTERLHLHLSPGDVANRLELITKVYGLD 89
Query: 78 KAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLIL 137
+A Y +P+ + + Y +LL N V+KAEE+F +M+ G +S+A N ++ L
Sbjct: 90 RAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFEKMRGMGM-ASSYAYNVMMRL 148
Query: 138 YKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
Y + GQ + M Q AM+ GI PD
Sbjct: 149 YLQ-------------------------------NGQVERVHSMHQ---AMEESGIVPDV 174
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
ST L V+ RK+K L A A+ + I +
Sbjct: 175 STTHTL----VAVLRKKKT------------------------LVAAYVVAEDIKAIENV 206
Query: 258 CE-SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV----YADH 312
E +N + M I K+N + AE ++ W+ H + L+ + Y
Sbjct: 207 LEKANSCNSMYMCRIGVLLKMNDMVGAEKAYEE----WESKHVYHDSRLINLLVDAYCKE 262
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK--AQQQNKFKPMF 370
++ K + LV Q + G L + + G+V KA + K A N++ P
Sbjct: 263 GLMDKAEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKKALASASNEWIPDL 322
Query: 371 SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMR 430
++ ++ ++ +A++ ++ + E++ ++++ R + L++ Y+NA P + RM+
Sbjct: 323 TNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTR-DIYHGLLKTYVNAGKPVSDLLHRMK 381
Query: 431 ADNV 434
D +
Sbjct: 382 KDGM 385
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 154/361 (42%), Gaps = 10/361 (2%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLT 161
C +G V A + + M G + + N LL Y R D +V ++L +ME E ++ T
Sbjct: 188 CKSGR-VDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEAT 246
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+Y IL+D + D++ ++ + MK+ + D + Y G +A +L
Sbjct: 247 VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLD 306
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD--VCMAAIEAWGKLN 278
E G+ ++ + T +L+ + ++G+ + + + L+ + I+ + +
Sbjct: 307 ECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKG 366
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
V++A + M K +L Y L L + K L+ M E G + +
Sbjct: 367 MVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYT 426
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L+ +H + G++ +A L + + P +Y +++D Y K+G I E+ M +
Sbjct: 427 TLISIHCKDGDMVEARR-LFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEK 485
Query: 399 VGYVARFKQFQTLVQAY-INAKTP-AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVS 456
G+V + +LV + +N K A + + M+ PN + A A + K S
Sbjct: 486 KGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPN--VVAYTALISGLAKEGRS 543
Query: 457 E 457
E
Sbjct: 544 E 544
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 39/301 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL++ C AG+ ++A ++F +K GF + N LL +Y + + K A +VL M
Sbjct: 252 TYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQM 311
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E + + + +Y L+ + L + M +GI+PD T L +V+ G++
Sbjct: 312 ESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKE 371
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNP----W--- 263
E A + +EM K + T L+ +Y + GK +++ +++ K+C+ +P W
Sbjct: 372 ELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTL 431
Query: 264 ----------------------------LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
D I A+G+ ++A A +KRM +
Sbjct: 432 LAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGV 491
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
Y A+L A + + + ++ +M + GC + + +L+ + G EVE+ ++
Sbjct: 492 SPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNA 551
Query: 356 I 356
+
Sbjct: 552 L 552
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 154/367 (41%), Gaps = 10/367 (2%)
Query: 43 ALQLSEWLET-NKKLDFIERDY-ASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTL 99
AL L +++ T N ++ + A + ++ K + +A S + + + F +V T
Sbjct: 125 ALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTS 184
Query: 100 LANCVAGNN-VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK--KVADVLLLMEKE 156
L A N + A +VF +MK+ G T N +L +Y ++ K+ ++ M+
Sbjct: 185 LITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCH 244
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+ +Y LI + + E +K G PD+ T L Y R ++A
Sbjct: 245 GLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEA 304
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELG-KADQVARIWKLCESNPWLDVCMAAIEAWG 275
+LK+ME ++ + T L+ Y G D + K+ + DV G
Sbjct: 305 MEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSG 364
Query: 276 KLN--KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+N K E A VF+ M K K + + AL+K+Y D + + K++ C
Sbjct: 365 FVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPD 424
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+ W+ L+ + + G ++ S + + ++++F P ++ ++ Y + G +
Sbjct: 425 IVTWNTLLAVFGQNG-MDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAY 483
Query: 394 HRMRQVG 400
RM + G
Sbjct: 484 KRMLEAG 490
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 113/261 (43%), Gaps = 21/261 (8%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+++ I G++ ++ ++ ++++G E D L Y + + A + +M+
Sbjct: 149 VIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEV 208
Query: 227 NLKEHRWTCRLLLPLYAELGK--ADQVARIWK---------LCESNPWLDVCMAAIEAWG 275
+ T +L +Y ++G A +A + LC N + C A G
Sbjct: 209 GCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRA-----G 263
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
L EEA +F+ + + Y ALL VY + + +++KQM + +
Sbjct: 264 SL--YEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVV 321
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+++LV +V GG +E D+++LK + +K KP +Y ++ + G ++F
Sbjct: 322 TYNSLVSAYVRGGLLE--DALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFE 379
Query: 395 RMRQVGYVARFKQFQTLVQAY 415
MR+VG F L++ Y
Sbjct: 380 EMRKVGCKPNICTFNALIKMY 400
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 113/279 (40%), Gaps = 14/279 (5%)
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+V+ V M++ + ++ LI G+ + M G+ PD ST +
Sbjct: 443 EVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVL 502
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE----- 259
GG E++E +L EM+ K + T LL YA +V R+ L E
Sbjct: 503 ATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYA---NGREVERMNALAEEIYSG 559
Query: 260 ---SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
++ L + + + K++ + E E F K A+L +Y KM+
Sbjct: 560 TIKTHAVLLKTLVLVNS--KVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVP 617
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
K +++ M ESG + ++++L+ ++ K++ I + + +P SY ++
Sbjct: 618 KANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKG-IEPDVISYNIV 676
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ Y + + ++I M+ V + T + AY
Sbjct: 677 IYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAY 715
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 18/258 (6%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y +LA G +++E+V MKD G + LL Y + ++V + L E
Sbjct: 497 TYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYA--NGREVERMNALAE 554
Query: 155 K---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ +K K L+ + + + L ++ + GI PD +T + Y G
Sbjct: 555 EIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIY---G 611
Query: 212 RKE---KAEAMLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLD 265
RK+ KA +L M L + L+ +Y+ K++Q+ R ++ + D
Sbjct: 612 RKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFR--EILDKGIEPD 669
Query: 266 VCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
V I A+ + + ++EA+ + + M Y + YA M + D+++
Sbjct: 670 VISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIR 729
Query: 324 QMAESGCHIGPLAWDALV 341
M + GC ++++V
Sbjct: 730 YMIKQGCKPNHNTYNSIV 747
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV-VYRTLLANCVAGNN----VKKAEE 114
E Y+S L A R +++ + ++I + G + + LL V N+ + + E
Sbjct: 530 EVTYSSLLHAYANGREVERMNALAEEI---YSGTIKTHAVLLKTLVLVNSKVDLLVETER 586
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA---DVLLLMEKENVKLTQFSYKILIDI 171
F + +G N +L +Y R KK V ++L M + + L+ SY L+ +
Sbjct: 587 AFLEFRKRGISPDVTTSNAMLSIYGR--KKMVPKANEILNFMYESGLTLSLTSYNSLMYM 644
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
++ + +Q+ + +GIEPD + I+ Y ++A+ +++EM+
Sbjct: 645 YSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMK 697
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 154/363 (42%), Gaps = 14/363 (3%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLT 161
C +G V A + + M G + + N LL Y +R D +V ++L +ME ++ T
Sbjct: 143 CKSGR-VDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEAT 201
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+Y IL+D + D++ ++ VV+ MK++ + D + Y G +A +
Sbjct: 202 VGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFD 261
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGK 276
E G+ ++ + T +L+ + ++G+ + + + N + M I+ + +
Sbjct: 262 ECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTM--IDGYCR 319
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
V+ A V M K +L Y L +++ K L+ M E G +
Sbjct: 320 QGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVT 379
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ L+ +H + G++ +A L + P +Y ++MD Y K+G I E+ M
Sbjct: 380 YTTLISIHCKEGDMVEARR-LFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEM 438
Query: 397 RQVGYVARFKQFQTLVQAY-INAKTP-AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTA 454
+ G V + +LV + +N K A + + M+ PN + A A + K
Sbjct: 439 EKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPN--VVAYTALISGLAKEG 496
Query: 455 VSE 457
SE
Sbjct: 497 RSE 499
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 132/316 (41%), Gaps = 9/316 (2%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLAN- 102
+L E +E N ++ Y +D ++ + K E+ + ++ ++ G+V T + N
Sbjct: 188 ELLEIME-NGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINA 246
Query: 103 -CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
C AGN V++A EVF+ G L+ + ++ + + A++LL M+ V
Sbjct: 247 YCRAGN-VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGH 305
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
Q + +ID + + +V AM+ GIE D T LA R +A+ +L
Sbjct: 306 NQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLL 365
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKL 277
M + + T L+ ++ + G + R+++ P + ++ + K
Sbjct: 366 HIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKK 425
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+ EAE K M K Y +L+ + + + L ++M G +A+
Sbjct: 426 GSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAY 485
Query: 338 DALVKLHVEGGEVEKA 353
AL+ + G E+A
Sbjct: 486 TALISGLAKEGRSEEA 501
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 109/291 (37%), Gaps = 36/291 (12%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFN 117
ER Y ++ K+ ++ AE + + G ++++ T++ V A +V
Sbjct: 272 ERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKA 331
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSN 176
M+ G + + N L R+++ A LL +M ++ V +Y LI I +
Sbjct: 332 AMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEG 391
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D+ ++ M +G P T ++ Y+ G +AE KEME L +T
Sbjct: 392 DMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYT-- 449
Query: 237 LLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
YA L + C + KV+ A +F+ M +
Sbjct: 450 -----YASL--------VHGHCVNG-----------------KVDVALKLFEEMKHRGTE 479
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV-KLHVE 346
+ YTAL+ A + L M ++G + ALV LH +
Sbjct: 480 PNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTD 530
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 155 KENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
K N++ + ++Y +L K +DL G Q+ E MKS+GI P+S L + G+
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGMHDLAG--QMFECMKSDGISPNSRLLGFLVSSFAEKGK 153
Query: 213 KEKAEAML---KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
A A+L E+EG C ++ L L K D+V KL E + C
Sbjct: 154 LHCATALLLQSYEVEG--------CCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCND 205
Query: 270 A------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
I + K E+A + MS Y L+K + L K ++
Sbjct: 206 TKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFD 265
Query: 324 QM-AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+ + SGC + + +++ + + G++++A S+LL + P ++ +++D YAK
Sbjct: 266 DVKSSSGCSPDVVTYTSMISGYCKAGKMQEA-SVLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
G++H+ E+I +M G F +L+ Y G R + M A +FPN
Sbjct: 325 AGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPN 381
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 111/241 (46%), Gaps = 5/241 (2%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+Y LI +SN+L +++ + +KS G PD T + Y G+ ++A +L +
Sbjct: 243 TYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDD 302
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLDVCM--AAIEAWGKLNK 279
M + T +L+ YA+ G+ I K+ + DV + I+ + ++ +
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
V + +++ M+ + Y+ L+ L K ++L+ Q+A P ++
Sbjct: 363 VNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
++ + G+V +A ++++ ++ K KP ++ +++ + +G + IFH+M +
Sbjct: 423 VIDGFCKAGKVNEA-IVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Query: 400 G 400
G
Sbjct: 482 G 482
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 151/377 (40%), Gaps = 50/377 (13%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD--------- 62
++ +AE+G + A A+ L++ + G + ++ L T KLD +E
Sbjct: 145 VSSFAEKG----KLHCATALL-LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLR 199
Query: 63 YASCLD------LIAKLRGLQKAESYIQKIPE-----SFRGEVVYRTLLANCVAGNNVKK 111
+ SC D LI L G+ KAE ++ + V Y TL+ N +KK
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKK 259
Query: 112 AEEVFNRMKDK-GFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILI 169
A E+F+ +K G ++ Y + K + A VLL M + + T ++ +L+
Sbjct: 260 ANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLV 319
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D ++ ++ +++ M S G PD T L Y G+ + + +EM +
Sbjct: 320 DGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMF 379
Query: 230 EHRWTCRLLL-------------PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGK 276
+ +T +L+ L +L D + + + NP I+ + K
Sbjct: 380 PNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMY---NP-------VIDGFCK 429
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
KV EA + + M K K +T L+ + + + + +M GC +
Sbjct: 430 AGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Query: 337 WDALVKLHVEGGEVEKA 353
+L+ ++ G ++A
Sbjct: 490 VSSLLSCLLKAGMAKEA 506
>gi|298572030|gb|ADI88012.1| PPR protein [Silene latifolia]
Length = 224
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
+P++ + +Y LL V KAE + +M++KG+ +T N ++ LY +LD+
Sbjct: 1 VPDTLKDMRLYGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELD 60
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAIL 203
+V +++ M+++ + L +SY I + +G M+QV M + I P+ +T + +
Sbjct: 61 EVEELVSEMKQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTM 120
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
A Y G EKAE L+ +E R LL LY LG +V R+W + +S
Sbjct: 121 ASMYAKLGELEKAEQCLRNLETRITNRDRMPYHYLLSLYGSLGNRGEVYRVWNIYKS--- 177
Query: 264 LDVCMAAIEAWG 275
I WG
Sbjct: 178 ---VFPKIPNWG 186
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y ALL Y K+ K + L++QM G I PL ++ ++ L+++ E+++ + L+
Sbjct: 11 YGALLNAYVGAKIRDKAEMLMEQMRNKGYCITPLPYNVMMTLYMKLDELDEVEE-LVSEM 69
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR-QVGYVARFKQFQTLVQAY 415
+Q K SY + + +G S E++F M + + F T+ Y
Sbjct: 70 KQKKISLDSYSYNIWLSARGSQGSPESMEQVFREMDLDPRIIPNWTTFSTMASMY 124
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 14/298 (4%)
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E N+K +Y L+ + D+ G QV++ M G+ PD+ T L +V+
Sbjct: 22 EGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREV 81
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYA----ELGKADQVARIWKLCESNPWLDVCMA 269
AE M+ M+ + T LL YA ++GKA++V P
Sbjct: 82 RAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNY 141
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
IE + K +++ AE V +RM ++ +Y L+ Y + + ++ +M + G
Sbjct: 142 LIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEG 201
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLK----AQQQNK----FKPMFSSYMLIMDQYA 381
+ L+ + + G+VE A+ +L + A+++ +P +Y +M+ YA
Sbjct: 202 VQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYA 261
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
+ G E + RM G+ F TL+ AY A P A + RM A V PN
Sbjct: 262 RAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPN 319
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 147/363 (40%), Gaps = 40/363 (11%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
I+ +S LT Y G D++ A+ L +RM L + F+ R
Sbjct: 31 ITYNSLLTAYTNAG-DMAGAQQVL-------KRMVQAGLSPDTYTFNTLIAAFVARR--- 79
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVV-YRTLLAN-CVAGNNVKKAEEVFNRMKDKG 123
++R +K +Y+Q+ +VV Y LL ++ KAEEV RM G
Sbjct: 80 ------EVRAAEKMVAYMQE--HGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDG 131
Query: 124 FPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
S+ N L+ Y + + A DVL M + T +Y +L+D + D G +
Sbjct: 132 VAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAE 191
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM------EGDNLKE---HRW 233
++++ MK EG++ + L Y G E AE +L M EG K+ +
Sbjct: 192 KILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVH 251
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRM 290
T L+ +YA G A + + W + + A+ + E AE V KRM
Sbjct: 252 TYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRM 311
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
+ Y LL A +M + ++ ++ A+ + +D + + +GG +
Sbjct: 312 EAAGVSPNVLTYNTLLS--ATSRMGLREGEVEERRAKRVLQV----YDTMRRSAGKGGGL 365
Query: 351 EKA 353
EKA
Sbjct: 366 EKA 368
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 127/298 (42%), Gaps = 14/298 (4%)
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E N+K +Y L+ + D+ G QV++ M G+ PD+ T L +V+
Sbjct: 15 EGGNLKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREV 74
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYA----ELGKADQVARIWKLCESNPWLDVCMA 269
AE M+ M+ + T LL YA ++GKA++V P
Sbjct: 75 RAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNY 134
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
IE + K +++ AE V +RM ++ +Y L+ Y + + ++ +M + G
Sbjct: 135 LIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEG 194
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLK----AQQQNK----FKPMFSSYMLIMDQYA 381
+ L+ + + G+VE A+ +L + A+++ +P +Y +M+ YA
Sbjct: 195 VQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYA 254
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
+ G E + RM G+ F TL+ AY A P A + RM A V PN
Sbjct: 255 RAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGDPEGAELVLKRMEAAGVSPN 312
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 19/260 (7%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSY 165
++ KAEEV RM G S+ N L+ Y + + A DVL M + T +Y
Sbjct: 108 GDMGKAEEVLERMARDGVAPNSYTYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNY 167
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM-- 223
+L+D + D G +++++ MK EG++ + L Y G E AE +L M
Sbjct: 168 CVLMDAYTRRRDARGAEKILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLA 227
Query: 224 ----EGDNLKE---HRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEA 273
EG K+ + T L+ +YA G A + + W + + A
Sbjct: 228 VAEEEGGGSKDCEPNVHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTA 287
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ + E AE V KRM + Y LL A +M + ++ ++ A+ +
Sbjct: 288 YSRAGDPEGAELVLKRMEAAGVSPNVLTYNTLLS--ATSRMGLREGEVEERRAKRVLQV- 344
Query: 334 PLAWDALVKLHVEGGEVEKA 353
+D + + +GG +EKA
Sbjct: 345 ---YDTMRRSAGKGGGLEKA 361
>gi|297847016|ref|XP_002891389.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337231|gb|EFH67648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 135/298 (45%), Gaps = 43/298 (14%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
++ + L ++ E G+ + + + + + R+ + KAL+ SEW+ + + DYA+
Sbjct: 66 AVKTHLERWRELGDQVKPSYVRGLVEDFRSTEQFSKALEASEWMCEQRVFNVFPEDYAAR 125
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCV-AGNNVKKAEEVFNRMKDKGFP 125
L+L+ + GL++AE + ++IPE+ R VY LL + + + KAE+ F +M+D GF
Sbjct: 126 LNLVETVLGLEEAEKFFERIPENMRDYSVYENLLRSYTKSEKTLDKAEDTFEKMRDLGFL 185
Query: 126 VTSFACNQLLILYKRLDKKKVA--------------------DVLLLME----------- 154
+ ++ LY++L+K+ + +VL ++
Sbjct: 186 SKPSPFDTMISLYRKLNKRDMVKKLKYEMMENNVKIDRPIELNVLSIVSDFKRDYLDPLW 245
Query: 155 ---KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
K+ KL Y+I I + +D+ G +++ + + G + D S +L + + G
Sbjct: 246 NKYKKEGKLMDDEYRIRISYLLKLDDVQGAEKIYQKWQPTGPKLDMSVPGLLISRFRAEG 305
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV-----ARIWKLCESNPWL 264
+ K E M+ + + H T L LPL LG V A I + + N WL
Sbjct: 306 NESKVEEMVNSIRMKRIVMHLAT--LTLPL-INLGLTIVVLAIMGAIITAIVKCNVWL 360
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 116/279 (41%), Gaps = 6/279 (2%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y L+ ++ L + +V M+ G PD T ++L Y + GR E A +LKEM
Sbjct: 328 AYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEM 387
Query: 224 EGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
E ++ + + +L Y + G K+ QV R + +P I+ +GK N +
Sbjct: 388 EASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCL 447
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
+ A A F RM + + L+ + +K ++L + M ESGC ++ +
Sbjct: 448 DHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIM 507
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ E E ++L K Q Q + +Y ++D Y + G + M+ VG
Sbjct: 508 INSFGEQERWEDVKTLLGKMQSQGLLANVV-TYTTLVDIYGQSGRFKDAIECLEVMKSVG 566
Query: 401 YVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
+ L+ AY I MRAD + P+
Sbjct: 567 LKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPS 605
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 126/301 (41%), Gaps = 10/301 (3%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K+ + LL +++ LT +Y LI +++DL ++ M+ +G D + +
Sbjct: 168 EKLYEAFLLSQRQT--LTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFI 225
Query: 204 AKHYVSGGRKEKA--EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
+ + + + + + E+E D ++ ++ +A+ G ++ + + N
Sbjct: 226 IQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGN 285
Query: 262 ---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P +A I A G + EEAEA+F+ + + T+ Y ALLK Y L
Sbjct: 286 GLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDA 345
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ +V +M SG + L+ + G E A I+LK + + +P + I+
Sbjct: 346 ESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESA-RIVLKEMEASGVRPNSYVFSRILA 404
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFP 436
Y RG + ++ MR G + ++ + N A DRMR + V P
Sbjct: 405 SYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQP 464
Query: 437 N 437
+
Sbjct: 465 D 465
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 159/417 (38%), Gaps = 47/417 (11%)
Query: 41 GKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLL 100
G A L WLE + E Y+ + + + L +A Q+ + + Y L+
Sbjct: 135 GTAYSLVTWLERHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLT---PLTYNALI 191
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI----------------LYKRLDKK 144
C ++++KA + +RM+ GFP + F +I +Y ++
Sbjct: 192 GACARNDDLEKALNLMSRMRRDGFP-SDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESD 250
Query: 145 KVA-------DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV------------ 185
K+ D+++ K S+ ++ G S + V+
Sbjct: 251 KIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEA 310
Query: 186 ----EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
E +K G+ P + L K YV G + AE+++ EME T LL+
Sbjct: 311 EAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDA 370
Query: 242 YAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
YA G+ + + K E++ P V + ++ K +++ V + M +
Sbjct: 371 YANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPD 430
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
Y ++ + L +M G + W+ L+ H + G KA+ L
Sbjct: 431 RHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEE-LF 489
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+A Q++ P ++Y ++++ + ++ + + +M+ G +A + TLV Y
Sbjct: 490 EAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIY 546
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 131/323 (40%), Gaps = 7/323 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L K L+ AES + ++ S E Y L+ + A V
Sbjct: 327 RAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKE 386
Query: 119 MKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G S+ +++L Y+ K +K VL M V + Y ++ID G+ N
Sbjct: 387 MEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNC 446
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L + M+ EG++PD+ T L + G KAE + + M+ T +
Sbjct: 447 LDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNI 506
Query: 238 LLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ + E + + V + +S L + ++ +G+ + ++A + M
Sbjct: 507 MINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVG 566
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S+ Y AL+ YA + + + + M G L ++L+ E +A
Sbjct: 567 LKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAF 626
Query: 355 SILLKAQQQNKFKPMFSSYMLIM 377
S+ L+ ++N KP +Y +M
Sbjct: 627 SV-LQYMKENDLKPDVVTYTTLM 648
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 94 VVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLL 151
V + TL+ +C +G++ KAEE+F M++ G + N ++ + ++ + V +L
Sbjct: 467 VTWNTLIDCHCKSGHH-NKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLG 525
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M+ + + +Y L+DI GQS + +E MKS G++P S+ L Y G
Sbjct: 526 KMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRG 585
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
E+A + M D LK P + V + I
Sbjct: 586 LSEQAINAFRVMRADGLK--------------------------------PSVLVLNSLI 613
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A+G+ + EA +V + M + K YT L+K + K + ++M SGC
Sbjct: 614 NAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGC 672
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/371 (20%), Positives = 161/371 (43%), Gaps = 10/371 (2%)
Query: 58 FIERDYASCLDLIA---KLRGLQKAESYIQKIPE-SFRGEV-VYRTLLANCVAGNNVKKA 112
F +D A + +IA KL+ Q AE + + + F G Y LL+ N ++A
Sbjct: 641 FDVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERA 700
Query: 113 EEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDI 171
+ M G + N +L + R K K++++ + + + ++ ++
Sbjct: 701 TRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHA 760
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
++ +L + MK G P L Y + AE ++K+++ L+
Sbjct: 761 FSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELD 820
Query: 232 RWTCRLLLPLYAELGKADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
++ LY++LG A ++K + +P I + + V+EA+A+ +
Sbjct: 821 IDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLR 880
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M KT + YT L+ Y + + + K +AE+GC A++ ++ ++ + G
Sbjct: 881 EMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAG 940
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
E K + I ++ + + F+P ++ ++MD Y K G E++ + ++G +
Sbjct: 941 EHRKIEEI-IEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHY 999
Query: 409 QTLVQAYINAK 419
+++ +++N K
Sbjct: 1000 TSIINSHLNNK 1010
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 113/260 (43%), Gaps = 7/260 (2%)
Query: 145 KVADVLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
+++D +L+ M+++ ++Y +I + G++ + + M+ +G PD+ T
Sbjct: 211 RLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYN 270
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLC 258
+ + GR E+ E + M T ++ +Y + G KA+++ K
Sbjct: 271 SVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEE 330
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P I+ GK V EA A+F+ M K+ + + + ++A++ YA M +
Sbjct: 331 GRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDA 390
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ M +G LA+ ++ + + G EK IL KA + KP S Y +++
Sbjct: 391 EHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKC-IILYKAMVGSGLKPELSVYAIMVR 449
Query: 379 QYAKRGDIHSTEKIFHRMRQ 398
+ ++ + E + M Q
Sbjct: 450 VFYQKSSVAEIENLSKEMVQ 469
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T Y L+ + + LS + ++M GC ++A++ ++ G VE A SI
Sbjct: 196 TITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFR 255
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Q+Q F P +Y ++ +A+ G I E+I MR + + T++ Y
Sbjct: 256 IMQEQG-FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMY 311
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
EL + VAR + NP + M ++ G+ N+ A+ +F R + + Y
Sbjct: 76 ELYECLNVARWYA---PNPRMLAVMLSV--LGRANQPGLAQELFDRAESSIGN-CVQVYN 129
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
+L+ VYA H + + L+ +M + GC + ++ ++K GG E S LL+
Sbjct: 130 SLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYA 189
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+P +Y ++ + + IF M++ G + ++ Y
Sbjct: 190 AGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVY 241
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 192/446 (43%), Gaps = 30/446 (6%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLD-------FIERD 62
S + K EEG ++S ++ + G A W + K++ + +
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKA---GHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
YA C + +++AE+ ++++ E +Y T++ + KK VF R+K
Sbjct: 422 YAHC-----QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+ GF T L+ LY ++ K K +V +M++E VK +Y ++I+ + D
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V E M EG++PD + + G ++A +KEM+ L+ HR T R +
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ--KLR-HRPTTRTFM 593
Query: 240 PL---YAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
P+ YA+ G ++ +V + + C P + I + ++E+A + M+
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 653
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ YT +++ YA K + ++ G + ++AL+K + G ++ A
Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ + +N + F Y +++D +A+RGD+ + +M++ G + + +
Sbjct: 714 LAVTKEMSARNIPRNSF-VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 414 AYINAK--TPAYGIRDRMRADNVFPN 437
A A A + M A V PN
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPN 798
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 146/346 (42%), Gaps = 7/346 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSY 165
++ +A E F RM+ +G TS L+ Y D + + M++E ++++ +Y
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+++ ++ D + K ++S + + E+AEA+++EME
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 226 DNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ + ++ Y A+ K V + K C P + I + K+ K+ +
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A V + M + K + K Y+ ++ + K + + + M + G + ++ ++
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
G +++A + K Q+ + +P ++M I+ YAK GD+ + ++F MR+ G V
Sbjct: 563 AFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 403 ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQ 446
F L+ + + A I D M V N+ ++ Q
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y LL C ++ A V M + P SF N L+ + +R D + AD++ M
Sbjct: 696 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 755
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+KE VK +Y I ++ D+ Q +E M++ G++P+ T L K +
Sbjct: 756 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 815
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLY---AELGKADQVARIWKLC----ESNPWLDV 266
EKA + +EM+ +K + LL A + +A + + +C E+ +D+
Sbjct: 816 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDM 875
Query: 267 --------CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
C+ IEA G E E + K W S H+ L
Sbjct: 876 GTAVHWSKCLCKIEASGG----ELTETLQKTFPPDWS--SHHHHHGFL 917
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 109/271 (40%), Gaps = 9/271 (3%)
Query: 68 DLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLA---NCVAGNNVKKAEEVFNRMKDK 122
++I+ G+ + IQ + E R RT + +++++ EVF+ M+
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 123 GFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G T N L+ L ++ +K ++L M V + +Y ++ D
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 678
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+ +++EG++ D T L K GR + A A+ KEM N+ + + +L+
Sbjct: 679 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 738
Query: 242 YAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+A G + A + + + P + + I A K + A + M K +
Sbjct: 739 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 798
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
K YT L+K +A + K ++M G
Sbjct: 799 IKTYTTLIKGWARASLPEKALSCYEEMKAMG 829
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
++ +G+ + A F+RM +++ YT+L+ YA + + + V++M E G
Sbjct: 316 VKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI 375
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + + +V + G E AD +A++ +K S Y I+ + + ++ E
Sbjct: 376 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA-SIYGKIIYAHCQTCNMERAE 434
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
+ M + G A + T++ Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGY 459
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 144/347 (41%), Gaps = 15/347 (4%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--MEKENVKLTQFSYK 166
V A + N ++ GF + +A L+ Y + + A VL+ ME+E K T +Y
Sbjct: 198 VSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDA-VLVFKKMEEEGCKPTLITYN 256
Query: 167 ILIDIKGQSN-DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+++++ G+ + + +V MKS G+ PD T L G E+A + +EM+
Sbjct: 257 VILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKL 316
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEE 282
+ T LL +Y + + + + K E + P + + I A+ + + E
Sbjct: 317 SGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLRE 376
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A + +M + K YT LL + M + +M +GC ++AL+K
Sbjct: 377 AMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIK 436
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+H G + + + + N P ++ ++ + + G +F M++ G+V
Sbjct: 437 MHGNRGRFAEMMKVFEEIEICN-CAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 495
Query: 403 ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFP-----NKALAA 442
F TL+ AY + A + RM V P N LAA
Sbjct: 496 PERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAA 542
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 132/324 (40%), Gaps = 6/324 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK--KKVADVLLLM 153
Y +L+ + + A VF +M+++G T N +L +Y ++ K++ ++ M
Sbjct: 220 YTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGM 279
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ V ++Y LI + + QV E MK G PD T L Y R
Sbjct: 280 KSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRP 339
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMAA 270
++A +LKEME T L+ YA G + + ++ E P +
Sbjct: 340 KEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTL 399
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ + K E A +F M K + + AL+K++ + ++ + +++ C
Sbjct: 400 LSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNC 459
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ W+ L+ + + G ++ S + K ++ F P ++ ++ Y++ G
Sbjct: 460 APDIVTWNTLLAVFGQNG-MDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAM 518
Query: 391 KIFHRMRQVGYVARFKQFQTLVQA 414
++ RM + G + ++ A
Sbjct: 519 AVYKRMLEAGVTPDLSSYNAVLAA 542
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 118/303 (38%), Gaps = 39/303 (12%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLL 151
+ Y TL++ C G+ ++A +VF MK GF N LL +Y + + K A +VL
Sbjct: 288 DYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLK 347
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME + +Y LI + L ++ + M +GI+PD T L + G
Sbjct: 348 EMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAG 407
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LCESNP----W- 263
E A + EM K + T L+ ++ G+ ++ ++++ +C P W
Sbjct: 408 MDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWN 467
Query: 264 ------------------------------LDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
D I A+ + ++A AV+KRM +
Sbjct: 468 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEA 527
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
Y A+L A + + + + +M + C L + +L+ + E+E+
Sbjct: 528 GVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERM 587
Query: 354 DSI 356
++
Sbjct: 588 HTL 590
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 119/279 (42%), Gaps = 15/279 (5%)
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD-SSTQAIL 203
+V+ V M++ + ++ LI + V + M G+ PD SS A+L
Sbjct: 481 EVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVL 540
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE---- 259
A GG E++E + EM+ K + T LL YA + ++ R+ L E
Sbjct: 541 AA-LARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYA---NSKEIERMHTLAEEIYS 596
Query: 260 --SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK-LSTKHYTALLKVYADHKMLS 316
+ P + + K + + E E F+ + K LST A++ +Y +M++
Sbjct: 597 GLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLST--LNAMIAIYGRRQMVA 654
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
K +++ M ESG +++L+ +H E+++ +L K KP SY +
Sbjct: 655 KANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVL-KEILAKGLKPDLISYNTV 713
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ Y + G + +IF M+ G V + T V +Y
Sbjct: 714 IFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASY 752
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 140/343 (40%), Gaps = 19/343 (5%)
Query: 92 GEVVYRTLLANCVAGNNVKKA-EEVFNRMKDKGFPVTSFACNQL----LILYKRLDKKKV 146
G+ V +L+ C G+ + K ++F + ++S N L L + K L K
Sbjct: 100 GQQVLDSLIDPCFEGSELDKVLSQLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKK 159
Query: 147 ADVLL-----LMEKENVK--LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
D+ + + E+E+ + L ++I + G+ ++ ++ ++ +G + D
Sbjct: 160 CDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYA 219
Query: 200 QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG----KADQVARIW 255
L Y S GR A + K+ME + K T ++L +Y ++G K +
Sbjct: 220 YTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGM 279
Query: 256 KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
K P I + + EEA VF+ M + + LL VY +
Sbjct: 280 KSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRP 339
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK-FKPMFSSYM 374
+ +++K+M SG + +++L+ + G + +A + LK Q K KP +Y
Sbjct: 340 KEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREA--MELKDQMVEKGIKPDVFTYT 397
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
++ + K G +IF MR G F L++ + N
Sbjct: 398 TLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGN 440
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%), Gaps = 2/157 (1%)
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
V I GK KV A ++ + K L YT+L+ YA + + K+M
Sbjct: 184 VVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKM 243
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E GC + ++ ++ ++ + G S L+ + + P +Y ++ +RG
Sbjct: 244 EEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLI-SCCRRGS 302
Query: 386 IH-STEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
++ ++F M+ G+ F TL+ Y ++ P
Sbjct: 303 LYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRP 339
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/156 (21%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKI 167
V KA E+ N M + GF + N L+ ++ R + ++ +VL + + +K SY
Sbjct: 653 VAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNT 712
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+I ++ + ++ MK+ G+ PD T Y + E A +++ M
Sbjct: 713 VIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHG 772
Query: 228 LKEHRWTCRLLLPLYAELG-KADQVARIWKLCESNP 262
K ++ T ++ Y + +AD + + L + +P
Sbjct: 773 CKRNQNTYNSIVDGYCKHSRRADAIMFVSSLNQLDP 808
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 192/446 (43%), Gaps = 30/446 (6%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLD-------FIERD 62
S + K EEG ++S ++ + G A W + K++ + +
Sbjct: 363 SCVRKMKEEGIEMSLVTYSVIVGGFSKA---GHAEAADYWFDEAKRIHKTLNASIYGKII 419
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
YA C + +++AE+ ++++ E +Y T++ + KK VF R+K
Sbjct: 420 YAHC-----QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 474
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+ GF T L+ LY ++ K K +V +M++E VK +Y ++I+ + D
Sbjct: 475 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 534
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V E M EG++PD + + G ++A +KEM+ L+ HR T R +
Sbjct: 535 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ--KLR-HRPTTRTFM 591
Query: 240 PL---YAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
P+ YA+ G ++ +V + + C P + I + ++E+A + M+
Sbjct: 592 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLA 651
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ YT +++ YA K + ++ G + ++AL+K + G ++ A
Sbjct: 652 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 711
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ + +N + F Y +++D +A+RGD+ + +M++ G + + +
Sbjct: 712 LAVTKEMSARNIPRNSF-VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 770
Query: 414 AYINAK--TPAYGIRDRMRADNVFPN 437
A A A + M A V PN
Sbjct: 771 ACSKAGDMNRATQTIEEMEALGVKPN 796
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 146/346 (42%), Gaps = 7/346 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSY 165
++ +A E F RM+ +G TS L+ Y D + + M++E ++++ +Y
Sbjct: 321 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 380
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+++ ++ D + K ++S + + E+AEA+++EME
Sbjct: 381 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 440
Query: 226 DNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ + ++ Y A+ K V + K C P + I + K+ K+ +
Sbjct: 441 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 500
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A V + M + K + K Y+ ++ + K + + + M + G + ++ ++
Sbjct: 501 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 560
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
G +++A + K Q+ + +P ++M I+ YAK GD+ + ++F MR+ G V
Sbjct: 561 AFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 619
Query: 403 ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQ 446
F L+ + + A I D M V N+ ++ Q
Sbjct: 620 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 665
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y LL C ++ A V M + P SF N L+ + +R D + AD++ M
Sbjct: 694 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 753
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+KE VK +Y I ++ D+ Q +E M++ G++P+ T L K +
Sbjct: 754 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 813
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLY---AELGKADQVARIWKLC----ESNPWLDV 266
EKA + +EM+ +K + LL A + +A + + +C E+ +D+
Sbjct: 814 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDM 873
Query: 267 --------CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
C+ IEA G E E + K W S H+ L
Sbjct: 874 GTAVHWSKCLCKIEASGG----ELTETLQKTFPPDWS--SHHHHHGFL 915
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 109/271 (40%), Gaps = 9/271 (3%)
Query: 68 DLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLA---NCVAGNNVKKAEEVFNRMKDK 122
++I+ G+ + IQ + E R RT + +++++ EVF+ M+
Sbjct: 557 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 616
Query: 123 GFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G T N L+ L ++ +K ++L M V + +Y ++ D
Sbjct: 617 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKA 676
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+ +++EG++ D T L K GR + A A+ KEM N+ + + +L+
Sbjct: 677 FEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG 736
Query: 242 YAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+A G + A + + + P + + I A K + A + M K +
Sbjct: 737 WARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPN 796
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
K YT L+K +A + K ++M G
Sbjct: 797 IKTYTTLIKGWARASLPEKALSCYEEMKAMG 827
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
++ +G+ + A F+RM +++ YT+L+ YA + + + V++M E G
Sbjct: 314 VKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI 373
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + + +V + G E AD +A++ +K S Y I+ + + ++ E
Sbjct: 374 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA-SIYGKIIYAHCQTCNMERAE 432
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
+ M + G A + T++ Y
Sbjct: 433 ALVREMEEEGIDAPIAIYHTMMDGY 457
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 150/322 (46%), Gaps = 11/322 (3%)
Query: 134 LLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ Y +L D + VL M K+ K + S L++ G++ + V M++ G
Sbjct: 148 LVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSG 207
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD---NLKEHRWTCRLLLPLYAELGKAD 249
EP + T I+ K +V G + ++AEA+ +++ + + K + +++ +Y + G
Sbjct: 208 PEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYA 267
Query: 250 QVARIW-KLCESN-PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
Q +++ ++ E P V ++ ++ +E ++ +M +T K Y+ L+K
Sbjct: 268 QARKLFAQMSERGIPLSTVTFNSLMSFE--TDYKEVSNIYDQMQRTALKPDVVSYSLLIK 325
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
Y + + + ++M ++G +++ L+ G VE+A ++ KA ++++ +
Sbjct: 326 AYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTV-FKAMRRHRVE 384
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGI 425
P SY ++ Y D+ EK F R+++ G + TL++ Y +N +
Sbjct: 385 PDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRV 444
Query: 426 RDRMRADNVFPNKALAAQVAQV 447
+RMR V PN+ + + V
Sbjct: 445 YERMRMQGVEPNQTIYTTIMDV 466
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 242 YAELGKADQVARIWKLCESNPW-----LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ +L K + V+ I + + W +D M + A+GKL AE V K M+K K
Sbjct: 116 FKQLKKWNLVSEILEWLRTQHWWNFSEMDFLML-VTAYGKLGDFSRAERVLKYMNKKGYK 174
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
S TAL++ Y K K + + ++M SG + + ++K VEG + ++A++I
Sbjct: 175 PSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAI 234
Query: 357 L--LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L +++ FKP + +++ Y K GD K+F +M + G F +L+
Sbjct: 235 FEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSF 294
Query: 415 YINAKTPAYGIRDRMRADNVFPN 437
+ K + I D+M+ + P+
Sbjct: 295 ETDYKEVS-NIYDQMQRTALKPD 316
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 160/386 (41%), Gaps = 16/386 (4%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLANC 103
++ EWL T +F E D+ + KL +AE ++ + + ++ V+ +T L
Sbjct: 127 EILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEA 186
Query: 104 VA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL---LLMEKE-NV 158
+KAE VF RM+ G ++ +L + DK K A+ + LL EK +
Sbjct: 187 YGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASF 246
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K Q + ++I + ++ D ++ M GI + T L ++
Sbjct: 247 KPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETD---YKEVSN 303
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMAAIEAWG 275
+ +M+ LK + LL+ Y + + ++ ++ ++ ++ P I+A+
Sbjct: 304 IYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFA 363
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
VEEA VFK M + + YT ++ Y + + + +++ E G +
Sbjct: 364 ISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVV 423
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
+ L+K + + VE+ + + + Q +P + Y IMD + + D + F
Sbjct: 424 VYGTLMKGYSKLNNVERVMRVYERMRMQG-VEPNQTIYTTIMDVHGRNSDFGNAVIWFKE 482
Query: 396 MRQVGYVARFKQFQTLVQAYINAKTP 421
M GY A K L+ AKTP
Sbjct: 483 MEARGYPADKKAKNILLSL---AKTP 505
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
+A ++F +M ++G P+++ N L+ D K+V+++ M++ +K SY +LI
Sbjct: 268 QARKLFAQMSERGIPLSTVTFNSLMSF--ETDYKEVSNIYDQMQRTALKPDVVSYSLLIK 325
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
G++ V E M G+ P + IL + G E+A + K M ++
Sbjct: 326 AYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEP 385
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVF 287
+ ++ Y D + ++ + + P + V ++ + KLN VE V+
Sbjct: 386 DLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVY 445
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+RM + + YT ++ V+ + K+M G A + L+ L
Sbjct: 446 ERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILLSLAKTP 505
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYML 375
E E+A+ + Q + KP ++Y L
Sbjct: 506 EEQEEANELTGNCAIQLEAKPDGTTYGL 533
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 128/273 (46%), Gaps = 4/273 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TLL+ C +AE VF M + G + L+ + +L++ +KV+++L
Sbjct: 11 VTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKE 70
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME SY +L++ QS + V M+ G P+++T +IL Y GR
Sbjct: 71 MESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGR 130
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN--PWLDVCMA 269
+ + EM+ N + + T +L+ ++ E G +V ++ + E N P ++
Sbjct: 131 YDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEG 190
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A GK E+A+ + M++ S+K YT +++ Y + + M E G
Sbjct: 191 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 250
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
+++L+++ +GG +++++ILLK Q
Sbjct: 251 SKPTVETYNSLIQMFAKGGLYKESEAILLKMGQ 283
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 141/309 (45%), Gaps = 11/309 (3%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVLLLMEKENVKLTQFSYKILIDIK 172
VF+ ++ GF N LL ++ + LD + V+ V M+K + +Y LI
Sbjct: 409 VFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTE-VSGVFKEMKKSGYVPERDTYVSLISSY 467
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ ++ + M GI PD ST + GGR E+AE + EME + +
Sbjct: 468 SRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDE 527
Query: 233 WTCRLLLPLYAELGKADQVARI-----WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
+ LL YA K D++ + + ES+ L + + + K+N + + E F
Sbjct: 528 LSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNS--KVNNLSDTEKAF 585
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ + L A++ +Y + M+ K ++++ M ES ++ +++L+ ++
Sbjct: 586 LELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRL 645
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+ EK ++IL + + ++ +P SY ++ Y ++G + ++F M+ G V
Sbjct: 646 GDCEKCENILTEI-KSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVT 704
Query: 408 FQTLVQAYI 416
+ V++Y+
Sbjct: 705 YNIFVKSYV 713
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 126/291 (43%), Gaps = 5/291 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL++ C K+A +VF+ M+ GF N LL +Y + + A VL M
Sbjct: 249 TYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEM 308
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E+ + +Y LI + L Q+ E M+ +GIEPD T L G+
Sbjct: 309 EQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKI 368
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM--AA 270
+ A EM + K + T L+ L+ GK ++ ++ S ++ DV
Sbjct: 369 DAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTL 428
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ +G+ E VFK M K+ Y +L+ Y+ + + ++ K+M E+G
Sbjct: 429 LAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGI 488
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
H ++A++ GG E+A+ + + + + +P SY ++ YA
Sbjct: 489 HPDISTYNAVLSALARGGRWEQAEKLFAEMENLDS-RPDELSYSSLLHAYA 538
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKI 167
VKK EE+ + MK+ +++ N L+ +Y RL D +K ++L ++ + ++SY
Sbjct: 613 VKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNT 672
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+I G+ + ++ MK G+ PD T I K YV+ E+A +++ M
Sbjct: 673 MIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHG 732
Query: 228 LKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWL 264
K + T +L Y G+ AD + I L E +P +
Sbjct: 733 CKPNERTYNTILQEYCSHGRIADGKSFISNLPELHPGI 770
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 136/328 (41%), Gaps = 14/328 (4%)
Query: 41 GKALQLSEWLETNKKLDFI-ERD-YASCLDLIAKLRGL--QKAESYIQKIPESFRGEV-V 95
G ++S + KK ++ ERD Y S + ++ GL Q E Y + I ++
Sbjct: 436 GLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRC-GLFDQAMEIYKRMIEAGIHPDIST 494
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDKKKVADVLLL 152
Y +L+ G ++AE++F M++ + + LL Y K+LDK K +
Sbjct: 495 YNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIY 554
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
E+ ++ K L+ + + N+L+ ++ ++ D + + Y G
Sbjct: 555 AER--IESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGM 612
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMA 269
+K E +L M+ ++ T L+ +Y+ LG ++ I K + P
Sbjct: 613 VKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNT 672
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A+G+ +++EA +F M + Y +K Y + M + DLV+ M G
Sbjct: 673 MIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHG 732
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSIL 357
C ++ +++ + G + S +
Sbjct: 733 CKPNERTYNTILQEYCSHGRIADGKSFI 760
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 114/274 (41%), Gaps = 41/274 (14%)
Query: 60 ERDYASCLDLIAKLRGLQKAES-----YIQKIPESFRGEVVYRTLLANCVAGNNVKKAEE 114
E Y+S L A + L K +S Y ++I ES G V +TL+ NN+ E+
Sbjct: 527 ELSYSSLLHAYANAKKLDKMKSLSEDIYAERI-ESHNGLV--KTLVLVNSKVNNLSDTEK 583
Query: 115 VFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKG 173
F ++ + + N ++ +Y K KKV ++L LM++ ++ L+ +Y L+ +
Sbjct: 584 AFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYS 643
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
+ D + ++ +KS PD + + Y G+ ++A + EM+
Sbjct: 644 RLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMK--------- 694
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
C L+P + N + ++++ + EEA + + M
Sbjct: 695 -CSGLVP---------------DIVTYNIF-------VKSYVANSMFEEAIDLVRYMVTH 731
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
K + + Y +L+ Y H ++ GK + + E
Sbjct: 732 GCKPNERTYNTILQEYCSHGRIADGKSFISNLPE 765
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 157/361 (43%), Gaps = 12/361 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE----VVYRTLLANCVAGNNVKKAEEVFNR 118
Y + + A+ + L++A ++++ E RG V Y L+ + V A++V +
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRE--RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 239
Query: 119 MKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M + GF N L+ + KR + +L +M + ++ +Y LID +S
Sbjct: 240 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 299
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+V+E MK+ G+ PD+ T + L + E+AE ML+ M G
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359
Query: 238 LLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ + + GK A + + + +P + I+ KL K+ EA+ + ++M ++
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 295 KKLS-TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
L Y+ ++ ML + + L+ +M ++GC+ + + ++ + G +E+A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ LL+ ++ P +Y ++ K + E++ MR G + T+V
Sbjct: 480 E-YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 538
Query: 414 A 414
Sbjct: 539 G 539
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 109/297 (36%), Gaps = 37/297 (12%)
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEK-ENVKLTQFSYKILIDIKGQSNDLTGM 181
GF T+F+ N LL + R K + A L E + + SY I+I + DL
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+++E MKS G PD+ T + + G + A L+ M D
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCD--------------- 176
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
P + A I A+ + K+EEA + + M + +
Sbjct: 177 --------------------PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVT 216
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y L+ M+ +D+VK+M E G + +++LV + G V+ A LL
Sbjct: 217 YNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK-LLGIM 275
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+P +Y ++D K +++ M+ G + L+ A
Sbjct: 276 VAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKA 332
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/314 (19%), Positives = 133/314 (42%), Gaps = 14/314 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V Y L+ +A+EV MK +G +F + L+ + DK + A+ +L
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M Y +I +S L + ++ M+ + PD T + G+
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404
Query: 213 KEKAEAMLKEME--GDNLKEHRWTCRLLLPLYAELGKADQVARIWKL----CES--NPWL 264
+A+ +L++M+ GD L + ++ L K+D + KL C++ NP +
Sbjct: 405 IAEAQVILEQMQESGDVLPDVVTYSTVI----NGLCKSDMLVEAQKLLDRMCKAGCNPDV 460
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
I+ K ++EEAE + + M + + YT L+ + + + + ++++
Sbjct: 461 VTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 520
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ-QNKFKPMFSSYMLIMDQYAKR 383
M +GC + ++ +V G +++A ++ + + + + P ++Y I++
Sbjct: 521 MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 580
Query: 384 GDIHSTEKIFHRMR 397
+ E++ +M+
Sbjct: 581 DLVQEAEQLLEQMK 594
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 181/427 (42%), Gaps = 37/427 (8%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSE--------------- 48
P++ I+++L E D+ E A+A T M + +QL+E
Sbjct: 50 PNVHIYTSLIHAYAEARDM---EGAVAC----TEEMLSQGIQLNEAVFCSIISGYASAGN 102
Query: 49 ------WLETNKKLDFIERD--YASCLDLIAKLRGLQKAESYIQKIPE-SFRGEV-VYRT 98
W E K + + Y S + + ++ E+ + ++ E F+G + +Y T
Sbjct: 103 NEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTT 162
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKEN 157
+L + +K F+R+K G T+ ++ L+ + + K D+L M+K
Sbjct: 163 VLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHG 222
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
V + Y +++D + D T +V E M S G++PD IL + GR +KA
Sbjct: 223 VSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKAL 282
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAW 274
+L+ +E + L T +L Y + G + ++ K P + + +
Sbjct: 283 GVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGL 342
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K ++E A + M + + YTAL + YA + K + ++M + I
Sbjct: 343 AKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDI 402
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+A+ AL+K + G +++A + + K +Y ++D +A++G++ + +
Sbjct: 403 VAYGALLKACCKSGAMQRAAEVFQQITDAG-LKHNRITYCTMLDGWARKGELSKARDLLN 461
Query: 395 RMRQVGY 401
M++ G+
Sbjct: 462 DMQKHGF 468
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 12/281 (4%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +L+D + D EAM++ I+P+ L Y E A A +EM
Sbjct: 20 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 79
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW--KLCESN--PWLDVCMAAIEAWGKLNKV 280
++ + ++ YA G ++ A W K N P V + ++A+ + +
Sbjct: 80 SQGIQLNEAVFCSIISGYASAGN-NEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 138
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA--WD 338
E EA+ +M + + + YT +L +A+ + K ++ C + P A +
Sbjct: 139 ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRL--KACGLSPTAATYG 196
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+VKL + G + KA I L+ ++ P Y +IMD YA+ GD + K++ M
Sbjct: 197 CIVKLFTKAGNMAKALDI-LEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVS 255
Query: 399 VGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
G + LV A+ A A G+ + + A+ + P
Sbjct: 256 AGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPT 296
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/345 (18%), Positives = 130/345 (37%), Gaps = 40/345 (11%)
Query: 134 LLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ Y R K A M ++K Y LI ++ D+ G E M S+G
Sbjct: 23 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 82
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
I+ + + + Y S G E AE ++ + +NL ++ Y + G + V
Sbjct: 83 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 142
Query: 253 RIWKLCESNPW---LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
+ E + L + + + ++ E+ + F R+ + Y ++K++
Sbjct: 143 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 202
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI------------- 356
++K D++++M + G + + ++ + GG+ A +
Sbjct: 203 TKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 262
Query: 357 ---------------------LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
+L+ + N+ P +Y I+D Y K G+I ++F R
Sbjct: 263 VIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDR 322
Query: 396 MRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNK 438
++ G + +L+ A+ A + + M A+ V PN+
Sbjct: 323 IKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNE 367
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 66/263 (25%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y ++L V G N++KA EVF+R+K G + N LL L K + +
Sbjct: 299 TYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLL---SGLAKAR--------Q 347
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
EN +L ++ M + G+ P+ + L + Y G E
Sbjct: 348 MENARL-----------------------MLNEMLANGVVPNERSYTALTEGYARAGDVE 384
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAW 274
KA M + M+ +NL + + Y L KA C+S
Sbjct: 385 KAFGMFQRMKKENLA-------IDIVAYGALLKA--------CCKSGA------------ 417
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
++ A VF++++ K + Y +L +A LSK +DL+ M + G H+
Sbjct: 418 -----MQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDT 472
Query: 335 LAWDALVKLHVEGGEVEKADSIL 357
+ + + +K G+ E+ L
Sbjct: 473 ICYTSFIKACFRSGDTEEVTETL 495
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 163/376 (43%), Gaps = 18/376 (4%)
Query: 34 LRTRRMYGKALQLSEWL--ETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES-- 89
LR R + + + EW+ ++ + D I Y +D + R L KAES + E+
Sbjct: 161 LRLNRQWDPIISVCEWIVYRSSFRPDII--CYNLLIDAYGRKRQLNKAESIYAAVLEAQC 218
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--ILYKRLDKKKVA 147
E Y LL ++ +AE V + M++ G P ++ N L +L R K V
Sbjct: 219 VPTEDTYALLLRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAV- 277
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
+V M+KE + +Y ++I++ G+S ++ M+S G + + T L +
Sbjct: 278 EVYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAF 337
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNP 262
G EKAE + ++M+ + + L+ Y+ G + I+ L CE P
Sbjct: 338 AREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCE--P 395
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
++A+G+ EAEA F+ + + + K + LL +A + + + ++
Sbjct: 396 DRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVM 455
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
Q+ +SG A +A++ + G ++ + +L A S+ + ++ YA+
Sbjct: 456 AQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLL--AAMDLAGSADVGSHNVAVNAYAR 513
Query: 383 RGDIHSTEKIFHRMRQ 398
G + E F +R+
Sbjct: 514 AGYLGRMEAAFEGIRR 529
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 9/243 (3%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEEVF +M+ G +A N L+ Y R + +++ LM+
Sbjct: 331 TALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQH 390
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY IL+D G++ + E++K +G+ P + +L + G +
Sbjct: 391 MGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGR 450
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM--AAIEA 273
E ++ ++ L+ + +L YA G+ D + R+ + DV A+ A
Sbjct: 451 CEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAMDLAGSADVGSHNVAVNA 510
Query: 274 WGKLNKVEEAEAVFKRMSKTWKK-----LSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ + + EA F+ + + K +T+ + YA K K ++ ++M ++
Sbjct: 511 YARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMVDA 570
Query: 329 GCH 331
GC+
Sbjct: 571 GCY 573
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 33/256 (12%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
Y +LID G+ L + + A+ P T A+L + Y + +AE ++ E
Sbjct: 188 ICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISE 247
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
M+ EH +P A + N +LD ++A + VE
Sbjct: 248 MQ-----EHG------IPPSATV--------------YNAYLD---GLLKARCTVKAVE- 278
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
V++RM K + +T+ YT ++ VY K + +M GC + ALV
Sbjct: 279 ---VYQRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVN 335
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
G EKA+ + + QQ +P +Y +M+ Y++ G +IF M+ +G
Sbjct: 336 AFAREGLCEKAEEVFEQMQQAGH-EPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCE 394
Query: 403 ARFKQFQTLVQAYINA 418
+ LV AY A
Sbjct: 395 PDRASYNILVDAYGRA 410
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 129/301 (42%), Gaps = 22/301 (7%)
Query: 131 CNQLLI-LYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
C LLI Y R + A+ + ++E + V T+ +Y +L+ + L + V+
Sbjct: 189 CYNLLIDAYGRKRQLNKAESIYAAVLEAQCVP-TEDTYALLLRAYCNARSLHRAEGVISE 247
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M+ GI P ++ + KA + + M+ + + + T L++ +Y GK
Sbjct: 248 MQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVY---GK 304
Query: 248 ADQVARIWKL--------CESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+ Q K+ C++N +C A + A+ + E+AE VF++M + +
Sbjct: 305 SKQPMSAMKIFNEMQSIGCKAN----ICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEP 360
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
Y AL++ Y+ ++ M GC +++ LV + G +A++
Sbjct: 361 DVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATF 420
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
+QQ P S+ML++ +A+ G++ E++ ++ + G ++ AY
Sbjct: 421 ESLKQQG-MAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYAR 479
Query: 418 A 418
A
Sbjct: 480 A 480
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V Y T++ + A ++F MKDK + N + L K ++ + VL
Sbjct: 253 VTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCK 312
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ + + +Y LID DL + M + GI T +L R
Sbjct: 313 LLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKR 372
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMA 269
E+AE M+KEM ++ T + + Y G A + ++ ++ E N P ++ +
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTS 432
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +GK N++ EAE FK+ K + AL+ + + + + L+K+M +
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ L++ + +VE+A LL ++ KP SY ++ Y+KRGD+
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKK-LLDEMKERGIKPDHISYNTLISGYSKRGDMKDA 551
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
++F M +G+ + L+Q Y
Sbjct: 552 LEVFDEMLSLGFDPTLLTYNALIQGY 577
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 112/266 (42%), Gaps = 4/266 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K N+K + ++ I+I+I + + M+ G++P+ T + Y G+
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESN--PWLDVCMA 269
E A + K M+ NLK +T + + + ++ + + KL ES P A
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +++A A M S Y L+ K + + +D++K+M E G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ + + G +KA S+ + ++N +P +Y ++D + KR +
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN-IRPTVETYTSLIDVFGKRNRMSEA 446
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
E+ F + + G + F L+ +
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGH 472
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 44/309 (14%)
Query: 89 SFRGEVVYRTLLANCVAGN----------NVKKAEEVFNRMKDKGFPVTSFACNQLLILY 138
++R E++ R ++A+ N +++AE++ M++KG N + Y
Sbjct: 343 AYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGY 402
Query: 139 KRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
R + KK + M ++N++ T +Y LID+ G+ N ++ ++ + EG+ PD
Sbjct: 403 CRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDI 462
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
L + G ++A +LKEM DN K ++P D+V
Sbjct: 463 IMFNALIDGHCVNGNIDRAFQLLKEM--DNAK--------VVP--------DEVTF---- 500
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
++ + + KVEEA+ + M + K Y L+ Y+ +
Sbjct: 501 ----------NTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKD 550
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
++ +M G L ++AL++ + + GE + A+ LL+ Q P S+Y+ ++
Sbjct: 551 ALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEE-LLREMQSKGITPDDSTYLYVI 609
Query: 378 DQYAKRGDI 386
+ D+
Sbjct: 610 EAMKTNDDL 618
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 81/213 (38%), Gaps = 12/213 (5%)
Query: 237 LLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LLL Y + K D+ L + N P + C + + KLNK++ A V++ M K
Sbjct: 152 LLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKM 211
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K S + ++ + K KD + M G + ++ ++ + G+ E A
Sbjct: 212 NIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAA 271
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
I K + KP +Y + + K I + ++ + G V + L+
Sbjct: 272 SKI-FKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALID 330
Query: 414 AYINAK--TPAYGIRDRMRADNVFPNKALAAQV 444
N A+ RD M N+ + A V
Sbjct: 331 GCCNKGDLDKAFAYRDEMM------NRGIVASV 357
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 139/309 (44%), Gaps = 11/309 (3%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVLLLMEKENVKLTQFSYKILIDIK 172
VF+ ++ GF N LL ++ + LD + V+ V M+K + +Y LI
Sbjct: 411 VFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSE-VSGVFKEMKKSGYVPERDTYVSLISSY 469
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ ++ + M GI PD ST + GGR E+AE + EME + +
Sbjct: 470 SRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDE 529
Query: 233 WTCRLLLPLYAELGKADQVARI-----WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
+ LL YA K D++ + + ES+ L + + + K+N + E E F
Sbjct: 530 LSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNS--KVNNLSETEKAF 587
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ + L A++ VY ++M+ K ++++ M S ++ +++L+ ++
Sbjct: 588 LELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRL 647
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+ EK ++IL + + +P SY ++ Y ++G + ++F M+ G +
Sbjct: 648 GDCEKCENILTEIKSSGA-RPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVT 706
Query: 408 FQTLVQAYI 416
+ V++Y+
Sbjct: 707 YNIFVKSYV 715
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 9/293 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY--KRLDKKKVADVLLL 152
Y TL++ C G K+A +VF+ M+ GF N LL +Y R+ + + VL
Sbjct: 251 TYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIG-VLKE 309
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME + +Y LI + L ++ E M+ +GI+PD T L G+
Sbjct: 310 MELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGK 369
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM--A 269
+ A EM + K + T L+ L+ GK ++ ++ S ++ DV
Sbjct: 370 IDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNT 429
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ +G+ E VFK M K+ Y +L+ Y+ + + ++ K+M E+G
Sbjct: 430 LLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAG 489
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN-KFKPMFSSYMLIMDQYA 381
+ ++A++ GG E+A+ + A+ +N +P SY ++ YA
Sbjct: 490 IYPDISTYNAVLSALARGGRWEQAEKLF--AEMENLDCRPDELSYSSLLHAYA 540
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 154/399 (38%), Gaps = 52/399 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI-----PESFRGEVVYRTLLANCVAGNNVKKAEEVFN 117
+ S LD+ K R +A ++++ P S V Y +L+++ V +K+A E+
Sbjct: 287 FNSLLDVYGKARMHDEAIGVLKEMELGGCPPSV---VTYNSLISSYVKDGLLKEAAELKE 343
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M+ KG L+ R K A M + K +Y LI + G
Sbjct: 344 EMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRG 403
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
M V + ++S G PD T L + G + + KEM+ R T
Sbjct: 404 KFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYV 463
Query: 237 LLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKT 293
L+ Y+ G DQ I+K + E+ + D+ A + A + + E+AE +F M
Sbjct: 464 SLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENL 523
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDL-------------------------VKQMAES 328
+ Y++LL YA+ K L K K L V ++E+
Sbjct: 524 DCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSET 583
Query: 329 ----------GCHIGPLAWDALVKLHVEGGEVEKADSI--LLKAQQQNKFKPMFSSYMLI 376
C + +A+V ++ + V+K + I L+K N ++S +
Sbjct: 584 EKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNS---L 640
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
M Y++ GD E I ++ G + T++ AY
Sbjct: 641 MHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAY 679
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 104 VAGNN--VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKL 160
V G N VKK EE+ + MK +++ N L+ +Y RL D +K ++L ++ +
Sbjct: 608 VYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARP 667
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
++SY +I G+ + ++ MKS G+ PD T I K YV+ E+A ++
Sbjct: 668 DRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLV 727
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWL 264
+ M K + T +L Y GK AD + + L + +P +
Sbjct: 728 RYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQLHPGI 772
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 139/329 (42%), Gaps = 14/329 (4%)
Query: 45 QLSEWLETNKKLDFI-ERD-YASCLDLIAKLRGL--QKAESYIQKIPESFRGEV-VYRTL 99
++S + KK ++ ERD Y S + ++ GL Q E Y + I ++ Y +
Sbjct: 442 EVSGVFKEMKKSGYVPERDTYVSLISSYSRC-GLFDQSMEIYKRMIEAGIYPDISTYNAV 500
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDKKKVADVLLLMEKE 156
L+ G ++AE++F M++ + + LL Y K+LDK K + EK
Sbjct: 501 LSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEK- 559
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
++ K L+ + + N+L+ ++ + D + + Y +K
Sbjct: 560 -IESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKV 618
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEA 273
E +L M+G ++ T L+ +Y+ LG ++ I +S+ P I A
Sbjct: 619 EEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYA 678
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ +++EA +F M + Y +K Y + M + DLV+ M GC
Sbjct: 679 YGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPN 738
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQ 362
++++++ + G++ A S L Q
Sbjct: 739 ERTYNSILQEYCRHGKIADAKSFLSNLPQ 767
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 105/251 (41%), Gaps = 9/251 (3%)
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA--DQV 251
EPD+S L + R A A+ + M + ++ T ++L +Y+++ D V
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV 234
Query: 252 ARIWKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
A + + LD I + +EA VF M + + +LL VY
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK-FKP 368
+M + ++K+M GC + +++L+ +V+ G +++A LK + + K +P
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAE--LKEEMEVKGIQP 352
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY-INAKTP-AYGIR 426
+Y ++ + G I + + M + G + L++ + + K P +
Sbjct: 353 DVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVF 412
Query: 427 DRMRADNVFPN 437
D +R+ P+
Sbjct: 413 DDLRSAGFVPD 423
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 136/327 (41%), Gaps = 36/327 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y L+ ++ ++F MKDKG S+ N L+ Y R K A + L
Sbjct: 89 VTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEA-LELYD 147
Query: 154 EKENVKLTQ--FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
E + V + +Y I I + G+ L M+++++ M ++G+ PD T L Y
Sbjct: 148 EMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKS 207
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
KA +L+EM + + WT ++L AR
Sbjct: 208 YFVKAHEILREMTEAGYRPNIWTYNIML----------SSAR------------------ 239
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
K V EA +F+ + + Y+A+L +Y H + ++ L +M E+GC
Sbjct: 240 ----KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCI 295
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+A+ L++ + G ++A + + +++ P Y +MD Y K G E
Sbjct: 296 PCIIAYSGLIESYGHHGMYQEALAC-FQDMRKSGIVPDTKIYTALMDAYGKAGRCREAEL 354
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINA 418
++ M + G+V + LV+A+ NA
Sbjct: 355 LYFEMTKEGFVPDGITYGILVRAFANA 381
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 136/352 (38%), Gaps = 14/352 (3%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME---KENVKLTQFSYKIL 168
A +F RM G T ++ Y R K K+ L L+E + K + Y L
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLR-QKSKLDHALRLLEVMKESGKKPDEILYNCL 59
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
++ S L +++++ MK + + + T L K Y + GR + + +EM+
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEEAEA 285
+ WT L+ Y G + ++ + + AI +GK +E+ E
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+ M Y LL VYA K +++++M E+G P W + L
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYR--PNIWTYNIMLSS 237
Query: 346 EGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
E A++ L ++K P +Y ++ Y + G K++ M + G +
Sbjct: 238 ARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPC 297
Query: 405 FKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTA 454
+ L+++Y + A MR + P+ + A +DA+ K
Sbjct: 298 IIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKI--YTALMDAYGKAG 347
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 165/375 (44%), Gaps = 9/375 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLL 152
V+Y L+ N +A + F+++KD+G P + C L K + K + L
Sbjct: 95 VIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKE 154
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + +K Q +Y ILID+ G++ ++ G PDS L + G
Sbjct: 155 MREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGM 214
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
++A + KE + + ++ +YA+ ADQ + KL + P +
Sbjct: 215 VDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGS 274
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+ + N+ A +F+ M ++ + Y +L VY+ S ++L+ +M + G
Sbjct: 275 VLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLG 334
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+A+ L+ ++ + G++++A + +QQ K Y ++D Y K G I+
Sbjct: 335 FRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQG-CKGNLIVYNTMLDMYGKAGRINDA 393
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPNKALAAQVAQV 447
E++ ++ V + TL+ AY IR ++ RAD + ++ L A + V
Sbjct: 394 ERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINV 453
Query: 448 --DAFRKTAVSELLD 460
A + + ++ELL+
Sbjct: 454 YGKARQYSKLAELLE 468
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 138/326 (42%), Gaps = 9/326 (2%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLME 154
Y ++ + + A+ F++MK G P N L++ Y KR + + ++
Sbjct: 62 YALVIKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLK 121
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
E + +Y ++ + ++ ++ ++ M+ GI+PD +IL + GR E
Sbjct: 122 DEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHE 181
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWLDVCMA 269
A A +E++ L+ +A++G DQ ++K C +P + M
Sbjct: 182 DAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTM- 240
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + K ++A V K M + + + Y ++L + L ++M ES
Sbjct: 241 -IQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESN 299
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
C G + ++ ++ + G A+ +L K +Q F+ +Y ++D Y K G +
Sbjct: 300 CRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLG-FRRNVVAYSTLIDMYGKVGKLQEA 358
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
++F M+Q G + T++ Y
Sbjct: 359 TRLFSTMKQQGCKGNLIVYNTMLDMY 384
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 8/256 (3%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
E+ Y ++L + N A ++F M++ +L +Y + A+ LL
Sbjct: 269 ELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLA 328
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + + +Y LID+ G+ L ++ MK +G + + + Y G
Sbjct: 329 KMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAG 388
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCMAA 270
R AE ++ E++ L T L+ Y LG+ ++ R+++ ++ LD + A
Sbjct: 389 RINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVA 448
Query: 271 --IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I +GK + + + + M K+ + T+ ++++Y D M +L++++ E
Sbjct: 449 IMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINE- 507
Query: 329 GCHIGPLAWDALVKLH 344
+GPL + L K H
Sbjct: 508 ---LGPLEGNTLHKQH 520
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 131/313 (41%), Gaps = 9/313 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + AK+ + +A ++ SF V++ T++ +A V MK
Sbjct: 202 YNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMK 261
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ G +L + R ++ A L M++ N + + +Y ++++ ++ +
Sbjct: 262 EIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHS 321
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
++++ M+ G + + L Y G+ ++A + M+ K + +L
Sbjct: 322 AAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTML 381
Query: 240 PLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+Y + G+ + R+ +L +S D I A+ +L + EE VF++ K
Sbjct: 382 DMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLK 441
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
L ++ VY + SK +L++ M +SG +V+++ +GG E A +
Sbjct: 442 LDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAEL 501
Query: 357 LLKAQQQNKFKPM 369
L K N+ P+
Sbjct: 502 LRKI---NELGPL 511
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 168/384 (43%), Gaps = 13/384 (3%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQK----AESYIQKIP-ESFRGEV-V 95
+A+ L EWL + ++ D+ ++++ ++ G + A + KIP + + +V
Sbjct: 161 RAVFLFEWLVLSSNSGALKLDH-HVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRA 219
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK--KKVADVLLLM 153
Y T+L +KA +F RMK+ G T N +L ++ ++ + +K+ VL M
Sbjct: 220 YTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEM 279
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ +K +F+ ++ + L +KS G EP + T L + + G
Sbjct: 280 RSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVY 339
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAA 270
+A ++LKEME +N T L+ YA G + + A + ++ P
Sbjct: 340 TEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTV 399
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+A+GK K +EA +F M + +T Y A+L + ++ ++ M +GC
Sbjct: 400 IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGC 459
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
W+ ++ L G ++K + + + + F+P ++ ++ Y + G
Sbjct: 460 FPNRATWNTILALCGNKG-MDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS 518
Query: 391 KIFHRMRQVGYVARFKQFQTLVQA 414
K++ M + G+ A + L+ A
Sbjct: 519 KMYGEMTRAGFNACVTTYNALLNA 542
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 169/404 (41%), Gaps = 31/404 (7%)
Query: 53 NKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVK 110
+K L F E ++ L A+ L++A+ + ++ G V Y LL
Sbjct: 281 SKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 340
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILI 169
+A V M++ P S N+L+ Y R K+ A V+ +M ++ V +Y +I
Sbjct: 341 EALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVI 400
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSST-QAILAKHYVSGGRKEKAEAMLK---EMEG 225
D G++ ++ +MK G P++ T A+L+ G+K ++ M+K +M+
Sbjct: 401 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSML----GKKSRSNEMIKMLCDMKS 456
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ +R T +L L G V R++ K C P D I A+G+ +
Sbjct: 457 NGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 516
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A ++ M++ Y ALL A G++++ M G ++ +++
Sbjct: 517 ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ 576
Query: 343 LHVEGGE---VEKADSILLKAQQQNKFKPMFSSYM----LIMDQYAKRGDIHSTEKIFHR 395
+ +GG +E+ + + + Q +F S+M L++ + R + +E+ F
Sbjct: 577 CYAKGGNYLGIERIEEGINEGQ-------IFPSWMLLRTLLLANFKCRA-LAGSERAFTL 628
Query: 396 MRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPN 437
++ GY F +++ + N A GI + D + P+
Sbjct: 629 FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPD 672
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 127/327 (38%), Gaps = 34/327 (10%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
F + T+LA C K VF MK GF N L+ Y R + A
Sbjct: 460 FPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 519
Query: 150 LLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
+ M + +Y L++ + D + V+ MKS+G +P ++ +++ + Y
Sbjct: 520 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 579
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM 268
GG E + EG N Q+ W L +
Sbjct: 580 KGGNYLGIERI---EEGIN--------------------EGQIFPSWMLLRT-------- 608
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ A K + +E F K K + ++L ++ + M + + +++ + E
Sbjct: 609 -LLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHED 667
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + + +++L+ ++V GE KA+ I LK ++++ KP SY ++ + ++G +
Sbjct: 668 GLNPDLVTYNSLMDMYVRRGECWKAEEI-LKTLEKSQLKPDLVSYNTVIKGFCRKGLMQE 726
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
++ M + G + T V Y
Sbjct: 727 AVRMLSEMTERGIRPCIFTYNTFVSGY 753
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/284 (18%), Positives = 113/284 (39%), Gaps = 13/284 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR----LDKKKVADV 149
Y LL + + E V + MK KGF T + + +L Y + L +++ +
Sbjct: 534 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEG 593
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
+ + + + + L+ + L G ++ K G +PD + +
Sbjct: 594 I---NEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTR 650
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDV 266
++AE +L+ + D L T L+ +Y G KA+++ + + + P L
Sbjct: 651 NNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVS 710
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
I+ + + ++EA + M++ + Y + Y M + +D+++ MA
Sbjct: 711 YNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMA 770
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
++ C L + +V + G+ +A + K + F P F
Sbjct: 771 KNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT---FDPCF 811
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 167/391 (42%), Gaps = 18/391 (4%)
Query: 40 YGKALQLSEWLETNKKLDF--IERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV--- 94
Y K L E LE ++++F ++ D + LI+ L + K ++ + E R
Sbjct: 335 YVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPN 394
Query: 95 --VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVL 150
Y L+ + VF+ ++ G+ N LL ++ + LD + V+ V
Sbjct: 395 LCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSE-VSGVF 453
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+K + +Y LI + ++ + M GI PD ST + G
Sbjct: 454 KEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARG 513
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-----WKLCESNPWLD 265
GR E+AE + EM + K + LL YA K D++ + + E + WL
Sbjct: 514 GRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLV 573
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ + K+N + E E F+ + + L A++ +Y +KM+ K ++++ M
Sbjct: 574 KTLVLVN--NKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLM 631
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E+ + +++L+ ++ G+ EK +SIL + + +P SY ++ Y ++G
Sbjct: 632 MENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSG-MRPDRYSYNTVIYAYGRKGQ 690
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ ++F M+ G + +++Y+
Sbjct: 691 MKEASRLFSEMKCSGVKPDIVTYNIFIKSYV 721
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 125/295 (42%), Gaps = 5/295 (1%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DV 149
R Y TL++ C ++A +VF+ MK GF N LL +Y + K + A V
Sbjct: 253 RDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGV 312
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
L ME + +Y LI + L ++ + M+ G++PD T L
Sbjct: 313 LKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDR 372
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM 268
G+ + A A EM + + T L+ L+ GK ++ ++ S ++ DV
Sbjct: 373 VGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVT 432
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ +G+ E VFK M K Y +L+ Y+ + + ++ K+M
Sbjct: 433 WNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMI 492
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
E+G + ++A++ GG E+A+ + + ++ KP SY ++ YA
Sbjct: 493 EAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRD-CKPDELSYSSLLHAYA 546
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 127/314 (40%), Gaps = 5/314 (1%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKIL 168
K+ + + MK+ G + N L+ +R ++ A V M+ + + ++ L
Sbjct: 237 KEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSL 296
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+D+ G++ V++ M++ G P T L YV G E+A + +EME +
Sbjct: 297 LDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 356
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEA 285
K T L+ +GK D + N P L A I+ G K E A
Sbjct: 357 KPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMA 416
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
VF + + LL V+ + + S+ + K+M ++G + +L+ +
Sbjct: 417 VFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYS 476
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
G ++A I + + + P S+Y ++ A+ G EK+F M
Sbjct: 477 RCGLFDQAMEIYKRMIEAGIY-PDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDE 535
Query: 406 KQFQTLVQAYINAK 419
+ +L+ AY NAK
Sbjct: 536 LSYSSLLHAYANAK 549
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 140/324 (43%), Gaps = 14/324 (4%)
Query: 45 QLSEWLETNKKLDFI-ERD-YASCLDLIAKLRGL--QKAESYIQKIPESFRGEV-VYRTL 99
++S + KK +I ERD Y S + ++ GL Q E Y + I ++ Y +
Sbjct: 448 EVSGVFKEMKKAGYIPERDTYVSLISSYSRC-GLFDQAMEIYKRMIEAGIYPDISTYNAV 506
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDKKKVADVLLLMEKE 156
L+ G ++AE++F M D+ + + LL Y K+LDK K + E+
Sbjct: 507 LSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAER- 565
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
++ + K L+ + + N+L ++ + ++ D + + Y +K
Sbjct: 566 -IERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKV 624
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEA 273
E +L M +++ T L+ +Y+ LG ++ I +S+ P I A
Sbjct: 625 EEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYA 684
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ +++EA +F M + K Y +K Y + M + DLV+ + GC
Sbjct: 685 YGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPN 744
Query: 334 PLAWDALVKLHVEGGEVEKADSIL 357
++++++ + G + +A S L
Sbjct: 745 ERTFNSILQGYSRHGRMVEAKSFL 768
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 90/236 (38%), Gaps = 26/236 (11%)
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLK---EMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
P++ A++ GG A A+++ ++ GD H R+L +A +
Sbjct: 113 PETDLPAVVNTLASRGGHPGIAVAVVRAARDLHGDRALHHP---RVLPTAIRVFARAGCL 169
Query: 252 ARIWKLCESNPWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
A + E+ P D A + A+ + + +A AVF+RM + + Y + Y
Sbjct: 170 AEASAILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAY 229
Query: 310 ADHKMLSKGKD---LVKQMAESGCHIGPLAWDALVK------LHVEGGEVEKADSILLKA 360
+ KM K+ LV M E G ++ L+ LH E +V
Sbjct: 230 S--KMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQV-------FDE 280
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ F+P ++ ++D Y K + RM G + +L+ AY+
Sbjct: 281 MKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYV 336
>gi|296090465|emb|CBI40661.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 102/194 (52%), Gaps = 1/194 (0%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S+ + L ++ EGN + +E+ LR + Y AL++SEW+ ++ + + + D
Sbjct: 63 PKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYKHALEISEWMVSHDEFELSDSDN 122
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
A +DL+ ++ G+ AE Y + +P + + Y LL + +KAEE++ R+K+
Sbjct: 123 AVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLHSYAGAKLAEKAEELYERIKESN 182
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
P+ N+++ LY + + +KV+ V+ ++++ V F+Y + + + D+ G+
Sbjct: 183 VPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVPDLFTYNLWVSSCAATLDIDGVR 242
Query: 183 QVVEAMKSEGIEPD 196
++++ M + D
Sbjct: 243 RILKEMSNNSSAND 256
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 182/427 (42%), Gaps = 37/427 (8%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSE--------------- 48
P++ I+++L E D+ E A+A T M + +QL+E
Sbjct: 164 PNVHIYTSLIHAYAEARDM---EGAVAC----TEEMLSQGIQLNEAVFCSIISGYASAGN 216
Query: 49 ------WLETNKKLDFIERD--YASCLDLIAKLRGLQKAESYIQKIPE-SFRGEV-VYRT 98
W E K + + Y S + + ++ E+ + ++ E F+G + +Y T
Sbjct: 217 NEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTT 276
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKEN 157
+L + +K F+R+K G T+ ++ L+ + + K D+L M+K
Sbjct: 277 VLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHG 336
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
V + Y +++D + D T +V E M S G++PD T IL + GR +KA
Sbjct: 337 VSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKAL 396
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAW 274
+L+ ++ + L T +L Y + G KA +V K P + + +
Sbjct: 397 GVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGL 456
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K ++E A + M + + YTAL + YA + K + ++M + I
Sbjct: 457 AKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDI 516
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+A+ AL+K + G +++A + + K +Y ++D +A++G++ +
Sbjct: 517 VAYGALLKACCKSGAMQRAVEVFQQITDAG-LKHNRITYCTMLDGWARKGELSKARDLLK 575
Query: 395 RMRQVGY 401
M++ G+
Sbjct: 576 DMQKHGF 582
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 12/281 (4%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +L+D + D EAM++ I+P+ L Y E A A +EM
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW--KLCESN--PWLDVCMAAIEAWGKLNKV 280
++ + ++ YA G ++ A W K N P V + ++A+ + +
Sbjct: 194 SQGIQLNEAVFCSIISGYASAGN-NEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 252
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA--WD 338
E EA+ +M + + + YT +L +A+ + K ++ C + P A +
Sbjct: 253 ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRL--KACGLSPTAATYG 310
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+VKL + G + KA I L+ ++ P Y +IMD YA+ GD + K++ M
Sbjct: 311 CIVKLFTKAGNMAKALDI-LEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVS 369
Query: 399 VGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
G + LV A+ A A G+ + ++A+ + P
Sbjct: 370 AGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPT 410
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/345 (18%), Positives = 129/345 (37%), Gaps = 40/345 (11%)
Query: 134 LLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ Y R K A M ++K Y LI ++ D+ G E M S+G
Sbjct: 137 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 196
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
I+ + + + Y S G E AE ++ + +NL ++ Y + G + V
Sbjct: 197 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 256
Query: 253 RIWKLCESNPW---LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
+ E + L + + + ++ E+ + F R+ + Y ++K++
Sbjct: 257 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 316
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI------------- 356
++K D++++M + G + + ++ + GG+ A +
Sbjct: 317 TKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDI 376
Query: 357 ---------------------LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
+L+ Q N+ P +Y I+D Y K G I ++F R
Sbjct: 377 VTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDR 436
Query: 396 MRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNK 438
++ G + +L+ A+ A + D M A+ V PN+
Sbjct: 437 IKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNE 481
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 103/263 (39%), Gaps = 66/263 (25%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y ++L V G +++KA EVF+R+K G + N LL L K + +
Sbjct: 413 TYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLL---SGLAKAR--------Q 461
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
EN +L +++ M + G+ P+ + L + Y G E
Sbjct: 462 MENARL-----------------------MLDEMLANGVVPNERSYTALTEGYARAGDVE 498
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAW 274
KA M + M+ +NL + + Y L KA C+S
Sbjct: 499 KAFGMFQRMKKENLA-------IDIVAYGALLKA--------CCKSGA------------ 531
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
++ A VF++++ K + Y +L +A LSK +DL+K M + G H+
Sbjct: 532 -----MQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDT 586
Query: 335 LAWDALVKLHVEGGEVEKADSIL 357
+ + + +K G+ E+ L
Sbjct: 587 ICYTSFIKACFRSGDTEEVTETL 609
>gi|326507912|dbj|BAJ86699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 169/388 (43%), Gaps = 21/388 (5%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN 102
AL+L +W+E+ + + A LDLI+K+ G+Q AE Y IP+ + Y LL N
Sbjct: 102 ALELLDWMES-RGANLSPGHQAMRLDLISKVHGIQAAEEYFWSIPDISKSVKTYSCLL-N 159
Query: 103 CVAGNNVK-KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKL 160
C + + K E + +MK K N L+ILY++ + +K+ M + +
Sbjct: 160 CYGKHGLAYKGLEFYEKMKAKSIVPDKLVYNYLMILYQKAGQPEKILSTFEEMRESGISA 219
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP-DSSTQAILAKHYVSGGRKEKAEAM 219
+F+Y LI+ NDL ++V+ ++ + P S ++A +Y+ KAE
Sbjct: 220 DKFAYFTLIESYITMNDLDAAEKVLAELQK--VAPVHWSLYTLMANNYIKLKLFGKAEVA 277
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC-----MAAIEAW 274
+K+ E K + LL L+A G + +V R+WK +S C + ++A
Sbjct: 278 IKKAEEGMDKADLRSWYALLSLHAHCGNSTEVKRVWKSLKST--FKKCLNRSYLVMLQAL 335
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ-MAESGCHIG 333
++ E + +F+ + + + ++K Y D M+ + + + + MA+ H G
Sbjct: 336 SMIDDFESLQQIFQEWQSSHEHYDKRIANVVIKAYLDKGMIDEAEAIRQSTMAQGHWHEG 395
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQ---NKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + +++ +V A IL A+ K+ P + Y + D E
Sbjct: 396 MVC--IFAEFYLDKSDVNAALEILRDAKNMVMARKWVPSKELVSRFLKHYEESNDASGAE 453
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINA 418
++++ + F+ Q Y+ A
Sbjct: 454 SFLECLKKLECL-DLDAFEAAKQTYVVA 480
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 151/364 (41%), Gaps = 22/364 (6%)
Query: 67 LDLIAKLRGLQKAESYIQKIP--------ESFRGEVVYRTLLANCVAGNNVKKAEEVFNR 118
L + K R QKAE + +K Y T++ +K+A E F R
Sbjct: 264 LQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKR 323
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME--KENVKLTQFSYKILIDIKGQSN 176
M ++G T+ N ++ +Y + ++ +V LM+ K + +Y ILI + ++N
Sbjct: 324 MLEEGIVPTTVTFNTMIHIYG--NNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNN 381
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D+ + MK +G++PD + L + E+AE ++ EM+ DN++ +T
Sbjct: 382 DIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQS 441
Query: 237 LLLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
L +Y E A+ + + W N + A I+A+G+ + EAE VF
Sbjct: 442 ALTRMYVE---AEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQ 498
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K+ + Y ++K Y K K +L + M G ++ LV++
Sbjct: 499 EVNKR-TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPH 557
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
K L K ++ Y ++ + K G ++ E+++ M + + L
Sbjct: 558 KGRCYLEKMRETGYVSDCI-PYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 412 VQAY 415
+ A+
Sbjct: 617 INAF 620
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 114/249 (45%), Gaps = 15/249 (6%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+L Y I++ I G++ + + + M +GI+P +ST L Y GG K A
Sbjct: 184 ELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC 243
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAA----- 270
L +M ++ T ++L +Y E KA++ + W E+ VC+++
Sbjct: 244 WLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNT 303
Query: 271 -IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +GK +++EA FKRM + +T + ++ +Y ++ L + L+K M
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK--- 360
Query: 330 CHIGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
H P ++ L+ LH + ++E+A + K + + KP SY ++ ++ R +
Sbjct: 361 LHCAPDTRTYNILISLHTKNNDIERAGA-YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 388 STEKIFHRM 396
E + M
Sbjct: 420 EAEGLIAEM 428
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 36/262 (13%)
Query: 147 ADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
A+ + + +E K T Y ++I G S ++ E+M S G+ PD T L +
Sbjct: 490 AERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQI 549
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV 266
S K L++M + V+ C
Sbjct: 550 LASADMPHKGRCYLEKMR----------------------ETGYVSDCIPYC-------- 579
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A I ++ KL ++ AE V+K M + + Y L+ +AD + + V+ M
Sbjct: 580 --AVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSI---LLKAQQQNKFKPMFSSYMLIMDQYAKR 383
E+G + +++L+KL+ + G +++A++I LL++ + ++ +++S +I + Y++R
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI-NLYSER 696
Query: 384 GDIHSTEKIFHRMRQVGYVARF 405
+ E IF M+Q G F
Sbjct: 697 SMVRKAEAIFDSMKQRGEANEF 718
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 122/301 (40%), Gaps = 13/301 (4%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKD 121
Y++ +D + L +AE E + V+ Y ++ + +KA E+F M
Sbjct: 474 YSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMS 533
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ-FSYKILIDIKGQSNDLTG 180
G N L+ + D L +E ++ Y +I + L
Sbjct: 534 YGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNM 593
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
++V + M IEPD +L + G ++A + ++ M+ + + L+
Sbjct: 594 AEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIK 653
Query: 241 LYAELGKADQVARIWK----LCESNPWLDV----CMAAIEAWGKLNKVEEAEAVFKRMSK 292
LY ++G D+ I++ C + DV CM I + + + V +AEA+F M K
Sbjct: 654 LYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCM--INLYSERSMVRKAEAIFDSM-K 710
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ + + +L +Y + + + KQM E PL++++++ L G ++
Sbjct: 711 QRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKE 770
Query: 353 A 353
A
Sbjct: 771 A 771
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAG-----NNVKKAEEVFN 117
Y S + L K+ L +AE+ +K+ +S +NC+ + V+KAE +F+
Sbjct: 648 YNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFD 707
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ-FSYKILIDIKGQSN 176
MK +G F +L +YK+ + + A + +E LT SY ++ +
Sbjct: 708 SMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDG 766
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
+ + M S GI+PD ST L + G +KA ++E+ +K
Sbjct: 767 RFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 136/327 (41%), Gaps = 36/327 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y L+ ++ ++F MKDKG S+ N L+ Y R K A + L
Sbjct: 89 VTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEA-LELYD 147
Query: 154 EKENVKLTQ--FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
E + V + +Y I I + G+ L M+++++ M ++G+ PD T L Y
Sbjct: 148 EMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKS 207
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
KA +L+EM + + WT ++L AR
Sbjct: 208 YFVKAHEILREMTEAGYRPNIWTYNIML----------SSAR------------------ 239
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
K V EA +F+ + + Y+A+L +Y H + ++ L +M E+GC
Sbjct: 240 ----KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCI 295
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+A+ L++ + G ++A + + +++ P Y +MD Y K G E
Sbjct: 296 PCIIAYSGLIESYGHHGMYQEALAC-FQDMRKSGIVPDTKIYTALMDAYGKAGRCREAEL 354
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINA 418
++ M + G+V + LV+A+ NA
Sbjct: 355 LYFEMTKEGFVPDGITYGILVRAFANA 381
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 136/352 (38%), Gaps = 14/352 (3%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME---KENVKLTQFSYKIL 168
A +F RM G T ++ Y R K K+ L L+E + K + Y L
Sbjct: 1 ACSLFYRMMKDGCEATVVTYTVIIHGYLR-QKSKLDHALRLLEVMKESGKKPDEILYNCL 59
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
++ S L +++++ MK + + + T L K Y + GR + + +EM+
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEEAEA 285
+ WT L+ Y G + ++ + + AI +GK +E+ E
Sbjct: 120 SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER 179
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+ M Y LL VYA K +++++M E+G P W + L
Sbjct: 180 LLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYR--PNIWTYNIMLSS 237
Query: 346 EGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
E A++ L ++K P +Y ++ Y + G K++ M + G +
Sbjct: 238 ARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPC 297
Query: 405 FKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTA 454
+ L+++Y + A MR + P+ + A +DA+ K
Sbjct: 298 IIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKI--YTALMDAYGKAG 347
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 167/391 (42%), Gaps = 18/391 (4%)
Query: 40 YGKALQLSEWLETNKKLDF--IERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV--- 94
Y K L E LE ++++F ++ D + LI+ L + K ++ + E R
Sbjct: 336 YVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPN 395
Query: 95 --VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVL 150
Y L+ + VF+ ++ G+ N LL ++ + LD + V+ V
Sbjct: 396 LCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSE-VSGVF 454
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+K + +Y LI + ++ + M GI PD ST + G
Sbjct: 455 KEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARG 514
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-----WKLCESNPWLD 265
GR +AE + EME + K + LL YA K D++ + + E + WL
Sbjct: 515 GRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLV 574
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ + K+N + E E F+ + + L A++ +Y +KM+ K ++++ M
Sbjct: 575 KTLVLVN--NKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLM 632
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E+ + +++L+ ++ G+ EK ++IL + + +P SY ++ Y ++G
Sbjct: 633 KENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSG-MRPDRYSYNTVIYAYGRKGQ 691
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ ++F M+ G + +++Y+
Sbjct: 692 MKEASRLFSEMKCSGVKPDIVTYNIFIKSYV 722
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 5/291 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL++ C ++A ++F+ MK GF N LL +Y + + + A VL M
Sbjct: 258 TYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKM 317
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E + +Y LI + L ++ + M+ G++PD T L G+
Sbjct: 318 ENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKI 377
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM--AA 270
+ A A EM + + T L+ ++ GK ++ ++ S ++ DV
Sbjct: 378 DAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTL 437
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ +G+ E VFK M K Y +L+ Y+ + + ++ K+M E+G
Sbjct: 438 LAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGI 497
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ ++A++ GG +A+ + + + ++ KP SY ++ YA
Sbjct: 498 YPDISTYNAVLSALARGGRWVQAEKLFAEMEDRD-CKPDELSYSSLLHAYA 547
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 141/324 (43%), Gaps = 14/324 (4%)
Query: 45 QLSEWLETNKKLDFI-ERD-YASCLDLIAKLRGL--QKAESYIQKIPESFRGEV-VYRTL 99
++S + KK +I ERD Y S + ++ GL Q E Y + I ++ Y +
Sbjct: 449 EVSGVFKEMKKAGYIPERDTYVSLISSYSRC-GLFDQAMEIYKRMIEAGIYPDISTYNAV 507
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDKKKVADVLLLMEKE 156
L+ G +AE++F M+D+ + + LL Y K+LDK K + ++
Sbjct: 508 LSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQR- 566
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
++ + K L+ + + N L+ ++ + ++ D + + Y +K
Sbjct: 567 -IEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKV 625
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEA 273
E +L M+ +++ T L+ +Y+ LG ++ I +S+ P I A
Sbjct: 626 EEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYA 685
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ +++EA +F M + K Y +K Y + M + DLV+ + GC
Sbjct: 686 YGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPN 745
Query: 334 PLAWDALVKLHVEGGEVEKADSIL 357
++++++ + G + +A S L
Sbjct: 746 ERTYNSILEGYCRHGRMVEAKSFL 769
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 5/309 (1%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKG 173
+ + MK+ G + + N L+ +R ++ A + M+ + + ++ L+D+ G
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
++ V++ M++ G P T L YV G E+A + +EME +K
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
T L+ +GK D + N P L A I+ G K E VF +
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
+ LL V+ + + S+ + K+M ++G + +L+ + G
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 482
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
++A I + + + P S+Y ++ A+ G EK+F M + +
Sbjct: 483 DQAMEIYKRMIEAGIY-PDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSS 541
Query: 411 LVQAYINAK 419
L+ AY NAK
Sbjct: 542 LLHAYANAK 550
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 95/228 (41%), Gaps = 11/228 (4%)
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA--DQVA 252
PD+S L + GR A A+ + M ++ T ++L +Y+++ + V
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 253 RIWKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
+ + E LD I + EA +F M + + +LL VY
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF---K 367
+ + ++K+M +GC + +++L+ +V+ G +E+A L+ +Q+ +F K
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEA----LELKQEMEFRGMK 358
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
P +Y ++ + G I + + M + G + L++ +
Sbjct: 359 PDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMH 406
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 151/381 (39%), Gaps = 48/381 (12%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRT--LL 100
AL +W E K + Y + +D + K++ + + + +G + T L+
Sbjct: 130 ALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKR--KGVLTKETFALI 187
Query: 101 ANCVA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENV 158
+ A VK+A F +M+ G + S N+LL L K +V + +
Sbjct: 188 SRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVF-----DKM 242
Query: 159 KLTQF-----SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
K+ +F SY IL++ GQ +L +D+V MK EG EPD T IL Y +
Sbjct: 243 KIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKY 302
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
+ A + +EME N C+ +P + I
Sbjct: 303 DDAIELFREMESKN------------------------------CQPSP--HIFCTLING 330
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
G + ++ EA F+R + T Y A++ Y + +V +M +SG
Sbjct: 331 LGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPN 390
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+D ++ ++ + +A S+ K + + +P S+Y +I+ + + S K++
Sbjct: 391 SRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVW 450
Query: 394 HRMRQVGYVARFKQFQTLVQA 414
RM+ G F L+ +
Sbjct: 451 DRMKAKGVHPGMHMFSILINS 471
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 147/353 (41%), Gaps = 12/353 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMK---DKGFPVTSFACNQLLILYKRLDK-KKVADVL 150
+Y L+ V V K VF R+K + G T + L+ LY +L K K +
Sbjct: 334 LYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQIS 393
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
ME + +K + +Y ++ID Q D V E M + GI+PD T IL +
Sbjct: 394 NEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKN 453
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVC 267
G+ +A +L ME + T +++ + ++G A + R K+ P
Sbjct: 454 GQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATY 513
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ + +++ A ++ M + + YT L++ YA + ++ E
Sbjct: 514 NVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKE 573
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS-YMLIMDQYAKRGDI 386
G +A+ +L+K + G ++ ++ + A+ PM + Y +++D +A+RGD+
Sbjct: 574 VGLKPDVIAYASLLKACCKAGRMQS--TLAITAEMAAAGVPMNNYIYNILLDGWAQRGDM 631
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
I +MR G + + + A A A ++M+ V PN
Sbjct: 632 WEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPN 684
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 123/280 (43%), Gaps = 11/280 (3%)
Query: 142 DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
D +KV D ++K Q + +L++ G+ D E+M++ GIEP+ +
Sbjct: 176 DARKVVDAFKRIKKPK----QRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYT 231
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
L Y A A ++EME + + + T +++ Y LG + R ++ S
Sbjct: 232 NLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSE 291
Query: 262 PWL--DVCM-AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
W DV I A+ K +E AEA+ M + + + Y L+ Y + + K
Sbjct: 292 NWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKC 351
Query: 319 KDLVKQM---AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML 375
++ +++ E+G +++ L+ L+ + G+++KA I + + Q K +Y +
Sbjct: 352 LNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQG-IKHNRKTYSM 410
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
I+D Y + GD + +F M G + L+ A+
Sbjct: 411 IIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAF 450
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFN 117
ER Y + ++ A + + A Y +I E + +V+ Y +LL C ++ +
Sbjct: 545 ERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITA 604
Query: 118 RMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M G P+ ++ N LL + +R D + +D++ M E + SY I+ ++
Sbjct: 605 EMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAG 664
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
D+ + +E MK +G++P+ L + S EKA EM+
Sbjct: 665 DMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMK 712
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYG 424
KP + L+++ Y KRGD HS F MR G + L+ AY A+ A
Sbjct: 189 KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIA 248
Query: 425 IRDRMRADNVFPNKA 439
+ M A+ V PN A
Sbjct: 249 CVEEMEAEGVSPNAA 263
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/385 (19%), Positives = 158/385 (41%), Gaps = 40/385 (10%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
VY +++ + KK VF R+K+ GF T + L+ LY ++ K K + M
Sbjct: 393 VYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEM 452
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E +K +Y +LI+ +D + E M G++PD + +L + + G
Sbjct: 453 ESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNM 512
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAA 270
++A + + M+ + ++ T R ++ +A G +A + + P + A
Sbjct: 513 DRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNAL 572
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I + ++VE+A +V +MS + YT +++ YA + K + ++ ESG
Sbjct: 573 IHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 632
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSI---------------------------------- 356
+ ++ L++ + G ++ A ++
Sbjct: 633 KLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAAD 692
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
LLK +++ P ++ ++ K GD+ E + M VG K F TL++ +
Sbjct: 693 LLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWA 752
Query: 417 NAKTPAYGIR--DRMRADNVFPNKA 439
P ++ + M++ + P++A
Sbjct: 753 RVSLPDRALKCFEEMKSAGLKPDEA 777
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 143/323 (44%), Gaps = 36/323 (11%)
Query: 94 VVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLL 151
++Y ++ A+C +GN + +AEE+ M++ G + ++ Y + D+KK V
Sbjct: 357 IIYSNIIHAHCQSGN-MDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFE 415
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+++ K T SY LI++ + + + + M+S GI+ ++ T ++L ++
Sbjct: 416 RLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLH 475
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
A ++ ++M L+ R LL+ + ++G D+ RI
Sbjct: 476 DFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRI----------------- 518
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
F+RM K + S + + +++ +A + + D + M SGC
Sbjct: 519 ---------------FERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCA 563
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ ++AL+ V +VEKA S+L K P +Y +IM YA GDI +
Sbjct: 564 PTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAG-IAPNEHTYTIIMRGYAASGDIGKAFE 622
Query: 392 IFHRMRQVGYVARFKQFQTLVQA 414
F ++++ G ++TL++A
Sbjct: 623 YFTKIKESGLKLDVYIYETLLRA 645
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 131/347 (37%), Gaps = 43/347 (12%)
Query: 134 LLILY--KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+++Y KR DK M ++ F + L+ + D+ G VE MKSE
Sbjct: 256 LMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSE 315
Query: 192 GIEPDSSTQAILAKHY-----------------------------------VSGGRKEKA 216
GIE T +IL Y G ++A
Sbjct: 316 GIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRA 375
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEA 273
E +++EME D + ++ Y + + ++ K C P + I
Sbjct: 376 EELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINL 435
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K+ KV +A A+ K M K + K Y+ L+ + + + + M +SG
Sbjct: 436 YVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPD 495
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++ LV+ + G +++A I + Q++ + +P ++ I++ +A GD+
Sbjct: 496 RAIYNLLVEAFCKMGNMDRAIRIFERMQKE-RMQPSNRTFRPIIEGFAVAGDMKRAFDTL 554
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNK 438
MR+ G + L+ + A + D+M + PN+
Sbjct: 555 DLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNE 601
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLL 151
E Y ++ A ++ KA E F ++K+ G + + LL + + + A V
Sbjct: 601 EHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR 660
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + + F Y ILID + D+ +++ MK +GI P+ T G
Sbjct: 661 EMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAG 720
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
++AE +++EM LK + T L+ +A + D+ + ++
Sbjct: 721 DMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFE 765
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 135/314 (42%), Gaps = 10/314 (3%)
Query: 147 ADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
++V M+ + +SY ILID + + +V + M++ GI P+ + +IL
Sbjct: 300 SEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDG 359
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW--- 263
+ GR +KA + +EM+ + ++ +L+ + G D + W+ SN +
Sbjct: 360 FCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPS 419
Query: 264 -LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
+ C + I+ + K + A F+ M K T +L +Y +K L
Sbjct: 420 AFNYC-SLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALS 478
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++ E+G H P +++ + G EKA +L ++N P +Y ++ +AK
Sbjct: 479 EKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVL-PDVVNYSTLISCFAK 537
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN--AKTPAYGIRDRMRADNVFPNKAL 440
R + +F +M +VG K + L+ +I+ AY + M+ V+P++
Sbjct: 538 RLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQ-- 595
Query: 441 AAQVAQVDAFRKTA 454
A + V F T
Sbjct: 596 IAYTSLVAGFCNTG 609
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 119/291 (40%), Gaps = 8/291 (2%)
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK--EN-VKLTQFSYKILIDIK 172
F M+ G + ACN +L +Y R K L L EK EN V +SY I
Sbjct: 443 FRIMQKLGMWPDTIACNHILSIYCR--KPDFNKALALSEKFQENGVHFNPYSYNEFIHRI 500
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ + Q++ M + PD + L + EKA + +M + +
Sbjct: 501 CRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNV 560
Query: 233 WTCRLLLPLYAELGKADQVARIWK-LCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKR 289
T +L+ L+ K D R++K + ES + D + + + ++ A A+F
Sbjct: 561 KTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDE 620
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
MS+ + YT + Y ++ L ++M E G + + + L+ GE
Sbjct: 621 MSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGE 680
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ +A+++ + +Q+ + P Y +++ Y K EK++ MR G
Sbjct: 681 MNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 150/381 (39%), Gaps = 49/381 (12%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL 150
+ VV+ L+ + + ++ A VF R KD G + +CN LL
Sbjct: 134 KSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLL--------------K 179
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD-SSTQAILAKHYVS 209
L+E V + +++LI + N T + + G D IL K Y+S
Sbjct: 180 CLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMS 239
Query: 210 GGRKEKAEAMLKEMEGDNLKEH----RWTCRLLLPLYAELGKADQVARIWKLCESN-PWL 264
G E N+ + + C++ L G A ++ I LC N P
Sbjct: 240 G-------------ETPNVVTYGTYIKGLCKVGL-----FGVAWRL--IQNLCRKNQPLN 279
Query: 265 DVCM-AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
+ C A I + ++EA VFK M + Y+ L+ + + + ++ K
Sbjct: 280 NHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFK 339
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
+M SG ++ L+ + G V+KA + + + + P SY +++D + ++
Sbjct: 340 EMRNSGILPNIYSYSILIDGFCKEGRVDKALEV-FEEMKNSGILPDVYSYSILIDGFCRK 398
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRD-------RMRADNVFP 436
GD+ S K + M + + +L++ Y +K A +++ M D +
Sbjct: 399 GDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIAC 458
Query: 437 NKALAAQVAQVDAFRKTAVSE 457
N L+ + D + A+SE
Sbjct: 459 NHILSIYCRKPDFNKALALSE 479
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/449 (21%), Positives = 187/449 (41%), Gaps = 36/449 (8%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKK--LDFIERDYASCL 67
S + K EEG ++S ++ + +G A W + K+ + Y + +
Sbjct: 350 SCVRKMNEEGIEMSLVTYSIVVGGFAK---FGNAEAADCWFKKAKERHTNLNAYIYGNII 406
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEV--VYRTLLANCVAGNNVKKAEEVFNRMKDKGF- 124
+ + +AE+ ++++ E +Y T++ N +K VF R+K+ GF
Sbjct: 407 YAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFA 466
Query: 125 -PVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
V ++ C L+ +Y ++ K K +V +M+ +K +Y +LI+ + D T
Sbjct: 467 PSVITYGC--LINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAF 524
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
V E + +G++PD + K + G ++A M+KEM+ + R T R +P+
Sbjct: 525 AVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERC---RPTSRTFMPII 581
Query: 243 AELGKADQVARIWKLCESNPWLDV-----CMAAIEAWGKL-------NKVEEAEAVFKRM 290
+A ++ R ++ D+ C+ + + L K+E+A + M
Sbjct: 582 HGFARAGEMRRALEI------FDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEM 635
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
+ YT ++ YA K + +M G + ++AL+K + G +
Sbjct: 636 ALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRM 695
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
+ A ++ + Q + F Y +++D +A+RGDI + +M Q G + +
Sbjct: 696 QSALAVTREMNAQKIPRNTF-VYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTS 754
Query: 411 LVQAYINAKT--PAYGIRDRMRADNVFPN 437
+ A A A + M A V PN
Sbjct: 755 FINACCKAGDMLRATKTMEEMEAAGVKPN 783
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 116/291 (39%), Gaps = 40/291 (13%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K ++ + +++ + D+ Q E+M++ GI+P S L Y G E+A +
Sbjct: 291 KPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALS 350
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
+++M + ++ T +++ +A+ G A+ A + W
Sbjct: 351 CVRKMNEEGIEMSLVTYSIVVGGFAKFGNAE--------------------AADCW---- 386
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
FK+ + L+ Y ++ Y + + + LV++M E G +
Sbjct: 387 --------FKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYH 438
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + EK I+ K ++ F P +Y +++ Y K G + ++ M+
Sbjct: 439 TMMDGYTMIRNEEKC-LIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKS 497
Query: 399 VGYVARFKQFQTLVQAYINAK--TPAYG-----IRDRMRADNVFPNKALAA 442
VG K + L+ ++ K T A+ I+D ++ D V N + A
Sbjct: 498 VGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKA 548
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEV-VYRTLLANCVAGNNVKKAEEVFN 117
E Y + + A L KA Y K+ E + +V Y LL C ++ A V
Sbjct: 644 EHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTR 703
Query: 118 RMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M + P +F N L+ + +R D + AD++ M +E V+ +Y I+ ++
Sbjct: 704 EMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAG 763
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D+ + +E M++ G++P+ T L + + EKA + +E++ LK
Sbjct: 764 DMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLK 816
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 1/152 (0%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLL 151
E Y T++ A + KA E F +M+++G + F LL + + + A V
Sbjct: 644 EHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTR 703
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + + F Y ILID + D+ +++ M EG++PD T G
Sbjct: 704 EMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAG 763
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+A ++EME +K + T L+ +A
Sbjct: 764 DMLRATKTMEEMEAAGVKPNVKTYTTLIHGWA 795
>gi|168056841|ref|XP_001780426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695174|dbj|BAD67152.1| PpPPR_38 [Physcomitrella patens]
gi|162668102|gb|EDQ54716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 132/311 (42%), Gaps = 10/311 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLME 154
Y + L NCV ++ A +F R + G + L+ + +L KV DV M+
Sbjct: 148 YNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVFSRMQ 207
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ +LI G + ++ +++G++PD+ L Y G E
Sbjct: 208 RNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWE 267
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCMA 269
+AE L +M + + R L+ Y + G D V +I + E++ L +
Sbjct: 268 EAEKTLSDMLDVGIVDDRPYAALVA-AYGKAGLTDNVNKILETMKASGVEASTTLYNTLI 326
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I + K E+A AV + M + YT++++ Y+ +K + ++ +M +G
Sbjct: 327 NIHS--KAEAPEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAG 384
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
GP+++ L+ + G + A+ I L+A Q K KP Y +++ YA
Sbjct: 385 IQPGPVSYGVLISAYCRAGRLGDAERI-LRAMQNAKCKPTVEIYNMMISGYASAKMRSQA 443
Query: 390 EKIFHRMRQVG 400
E++F M+ G
Sbjct: 444 ERMFQTMQDCG 454
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 25/210 (11%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSY 165
+NV K + MK G ++ N L+ ++ + + +K VL LM+ + + + +Y
Sbjct: 301 DNVNK---ILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEITY 357
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+++ ++ + ++ MK GI+P + +L Y GR AE +L+ M+
Sbjct: 358 TSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQN 417
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKL---CESNPWLDVCMAAIEAWGKLNKVEE 282
K +++ YA Q R+++ C P +
Sbjct: 418 AKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRP------------------DA 459
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADH 312
AE + RM + K + Y LLK Y D+
Sbjct: 460 AEDCYIRMQQLGCKPNAVTYKILLKAYTDY 489
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 10/171 (5%)
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I+ +GKL + VF RM + K T L+ Y + + + ++
Sbjct: 185 ALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQYAQAQ 244
Query: 329 GCHIGPLAWDALVKLHVEGG---EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
G +A+ ALV + + G E EK S +L + +P Y ++ Y K G
Sbjct: 245 GLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIVDD-RP----YAALVAAYGKAGL 299
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNV 434
+ KI M+ G A + TL+ + A+ P A + M+AD
Sbjct: 300 TDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGC 350
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 156/361 (43%), Gaps = 12/361 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE----VVYRTLLANCVAGNNVKKAEEVFNR 118
Y + + A+ + L++A ++++ E RG V Y L+ + V A++V +
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRE--RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 119 MKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M + GF N L+ + KR + +L +M + ++ +Y LID +S
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+V+E MK+ G+ PD+ T + L + E+AE ML+ M G
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 238 LLPLYAELGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ + + GK A + + + +P + I+ KL K+ EA+ + +M ++
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 295 KKLS-TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
L Y+ ++ ML + + L+ +M ++GC+ + + ++ + G +E+A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ LL+ ++ P +Y ++ K + E++ MR G + T+V
Sbjct: 358 E-YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 416
Query: 414 A 414
Sbjct: 417 G 417
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 130/313 (41%), Gaps = 14/313 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V Y L+ +A+EV MK G +F + L+ + DK + A+ +L
Sbjct: 163 VTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 222
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M Y +I +S L + ++ M+ + PD T + G+
Sbjct: 223 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 282
Query: 213 KEKAEAMLKEME--GDNLKEHRWTCRLLLPLYAELGKADQVARIWKL----CES--NPWL 264
+A+ +L +M+ GD L + ++ L K+D + KL C++ NP +
Sbjct: 283 IAEAQVILDQMQESGDVLPDVVTYSTVI----NGLCKSDMLVEAQKLLDRMCKAGCNPDV 338
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
I+ K ++EEAE + + M + + YT L+ + + + + ++++
Sbjct: 339 VTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 398
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ-QNKFKPMFSSYMLIMDQYAKR 383
M +GC + ++ +V G +++A ++ + + + + P ++Y I++
Sbjct: 399 MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 458
Query: 384 GDIHSTEKIFHRM 396
+ E++ +M
Sbjct: 459 DLVQEAEQLLEQM 471
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 94/249 (37%), Gaps = 5/249 (2%)
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC 267
+ G A +L+EM+ +T ++ A G D + +P +
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
A I A+ + K+EEA + + M + + Y L+ M+ +D+VK+M E
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G + +++LV + G V+ A LL +P +Y ++D K
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARK-LLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVA 445
+++ M+ G + L+ A A + RM P+ + + +
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI- 238
Query: 446 QVDAFRKTA 454
+ AF K+
Sbjct: 239 -IHAFCKSG 246
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 152/383 (39%), Gaps = 51/383 (13%)
Query: 46 LSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIP--ESFRGEVVYRTLLANC 103
LSE E F ++ ++ +L+A L+GL + + + + F + Y+++L N
Sbjct: 120 LSELFEP-----FKDKPESTSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNS 174
Query: 104 VAG---------NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
V V A +FN +++ GF + ++ L+ + + ++ +V M
Sbjct: 175 VIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 154 EKENVKLTQFSYKILIDIKGQ-SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
E+E K T +Y +++++ G+ + +VE MKS+GI PD+ T L G
Sbjct: 235 EEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
++A + +EM+ + T LL +Y
Sbjct: 295 HQEAAQVFEEMKAAGFSHDKVTYNALLDVY------------------------------ 324
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
GK ++ +EA V M S Y +L+ YA ML + +L QMAE G
Sbjct: 325 --GKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ L+ G+VE A +I + + KP ++ + Y RG KI
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMNI-FEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKI 441
Query: 393 FHRMRQVGYVARFKQFQTLVQAY 415
F + G + TL+ +
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVF 464
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 136/366 (37%), Gaps = 52/366 (14%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y TLL+ V+ A +F M++ G N + +Y ++ K D++ + +
Sbjct: 386 TYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYG--NRGKFVDMMKIFD 443
Query: 155 KENV---KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE-------------------- 191
+ NV ++ L+ + GQ+ GMD V + E
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQN----GMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 192 -------------------GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
G+ PD ST + GG E++E +L EME K +
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 233 WTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
T LL YA E+G +A P + + K + + EAE F
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ + +++ +Y +M+ K +++ M E G +++L+ +H +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
K++ IL + + KP SY ++ Y + + +IF MR G V +
Sbjct: 680 FGKSEEILREILAKG-IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYN 738
Query: 410 TLVQAY 415
T + +Y
Sbjct: 739 TFIGSY 744
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/403 (18%), Positives = 148/403 (36%), Gaps = 75/403 (18%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL+ C G+ ++A +VF MK GF N LL +Y + + K A VL M
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E + +Y LI + L ++ M +G +PD T L + G+
Sbjct: 341 ELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNP----W--- 263
E A + +EM K + T + +Y GK + +I+ +C +P W
Sbjct: 401 ESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTL 460
Query: 264 --------LDVCMAA--------------------IEAWGKLNKVEEAEAVFKRMSKTWK 295
+D ++ I A+ + E+A V++RM
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE---- 351
Y +L A M + + ++ +M + C L + +L+ + G E+
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 352 ----------KADSILLKA--------------------QQQNKFKPMFSSYMLIMDQYA 381
+ ++LLK ++ F P ++ ++ Y
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG 424
+R + ++ M++ G+ + +L+ Y+++++ +G
Sbjct: 641 RRQMVGKANEVLDYMKERGFTPSMATYNSLM--YMHSRSADFG 681
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 125/322 (38%), Gaps = 13/322 (4%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFS 164
G K + +MK G ++ N L+ KR ++ A V M+ + +
Sbjct: 257 GTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVT 316
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y L+D+ G+S+ +V+ M+ G P T L Y G ++A + +M
Sbjct: 317 YNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMA 376
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWLDVCM--AAIEAWGKL 277
K +T LL + GK + I++ C+ N +C A I+ +G
Sbjct: 377 EKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPN----ICTFNAFIKMYGNR 432
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
K + +F ++ + LL V+ + M S+ + K+M +G +
Sbjct: 433 GKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ L+ + G E+A ++ + P S+Y ++ A+ G +EK+ M
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAG-VTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 398 QVGYVARFKQFQTLVQAYINAK 419
+ +L+ AY N K
Sbjct: 552 DGRCKPNELTYCSLLHAYANGK 573
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 85/195 (43%), Gaps = 4/195 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V+ +TL+ C + + +AE F+ +K++GF N ++ +Y R K +VL
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDY 654
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M++ + +Y L+ + +S D ++++ + ++GI+PD + + Y R
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE---LGKADQVARIWKLCESNPWLDVCMA 269
A + EM + T + YA +A V R P + +
Sbjct: 715 MRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 270 AIEAWGKLNKVEEAE 284
++ + KLN+ +EA+
Sbjct: 775 IVDGYCKLNRKDEAK 789
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 66/157 (42%), Gaps = 2/157 (1%)
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
V I GK +V A +F + + L YT+L+ +A+ + ++ K+M
Sbjct: 175 VIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E GC + ++ ++ + + G + L++ + + P +Y ++ KRG
Sbjct: 235 EEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGS 293
Query: 386 IHS-TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+H ++F M+ G+ + L+ Y + P
Sbjct: 294 LHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRP 330
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 140/346 (40%), Gaps = 7/346 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L K+ L+ AE + ++ E E Y L+ + A +
Sbjct: 305 RAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKE 364
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G +S+ +++L ++ R D +K VL M V+ + Y ++ID G+ N
Sbjct: 365 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNC 424
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L V M+ EGIEPD T L + GGR + A + KEM N T +
Sbjct: 425 LGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNI 484
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ L E + V + + P + ++ +G+ + +EA + M
Sbjct: 485 MINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADG 544
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S Y AL+ YA + ++VK M G + ++L+ E V +A
Sbjct: 545 LKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAF 604
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
S+ L+ ++N F+P +Y +M + I+ M G
Sbjct: 605 SV-LQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 649
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSY 165
N + A +VFNRM+ +G N L+ + + + A ++ M + N +Y
Sbjct: 423 NCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTY 482
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 483 NIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKA 542
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEE 282
D LK L+ YA+ G AD + K ++ V + I A+G+ +V E
Sbjct: 543 DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVE 602
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A +V + M + + YT L+K + K + ++M SGC
Sbjct: 603 AFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGC 650
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 132/343 (38%), Gaps = 47/343 (13%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
+K +Y L+ + L + V++ M G+ PD +T ++L Y GR E A
Sbjct: 300 IKPRTRAYNALLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESAR 359
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAW 274
+LKEME D +K + +L + + G KA V R P I+ +
Sbjct: 360 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTF 419
Query: 275 GKLNKVEEAEAVFKRMSK--------TWKKLSTKH------------------------- 301
GK N + A VF RM TW L H
Sbjct: 420 GKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGT 479
Query: 302 --YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA-DSILL 358
Y ++ + + + + ++ +M E G + + LV ++ G ++A D I
Sbjct: 480 TTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI-- 537
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+A + + KP + Y +++ YA+RG + MR G A +L+ A+
Sbjct: 538 EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGED 597
Query: 419 K--TPAYGIRDRMRADNVFPN----KALAAQVAQVDAFRKTAV 455
+ A+ + M+ ++ P+ L + +V+ F K V
Sbjct: 598 RRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPV 640
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGK 319
P + A I A G +V EAEA+F + K T+ Y ALLK Y L +
Sbjct: 265 TPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAE 324
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML--IM 377
++ +M+E G + LV + G E A ILLK + + KP SSY+ I+
Sbjct: 325 HVLDEMSECGVAPDEATYSLLVDAYTRAGRWESA-RILLKEMEADGVKP--SSYVFSRIL 381
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVF 435
+ RGD + M G + ++ + N A + +RMR + +
Sbjct: 382 AGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVFNRMRGEGIE 441
Query: 436 PN 437
P+
Sbjct: 442 PD 443
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y LI+ G S + V + M G+ PD T I+ Y G +
Sbjct: 223 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQ 282
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
K + + M+G N++ T +++ +LG+ + I+ K E P +
Sbjct: 283 YSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTF 342
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
I + ++E + F M K + Y AL+ YA H M + + ++ +
Sbjct: 343 TTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKK 402
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G H +++ +L+ + + G+ EKA + + ++N KP SY ++D Y +G +
Sbjct: 403 NGFHPDVVSYTSLLNAYGKSGKPEKAMKV-FELMRRNHCKPNLVSYNALIDAYGSKGLLT 461
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+I H M + G TL+ A
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLLAA 488
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 114/272 (41%), Gaps = 4/272 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y L+ + K+A VFN +K GF + LL Y + K +K V L
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + K SY LID G LT +++ M+ G++P+ + L G+
Sbjct: 435 MRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQ 494
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
K K +++L E +K + + Y +G+ D+ +++ + P
Sbjct: 495 KVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNV 554
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K++K EA M LS + Y++++ Y+ +++ + + +M G
Sbjct: 555 LISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVG 614
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
C + + A++ + EKA ++ L+ +
Sbjct: 615 CRPDVITYTAMIHAYDVAENWEKASALFLEME 646
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 167/446 (37%), Gaps = 86/446 (19%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
IP S Y L+ C + N K+A V +M + G N +L YKR ++
Sbjct: 228 IPPS---RSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYS 284
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIK---GQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
KV LM+ N++ + I+I GQ+ + ++ +SE PD T
Sbjct: 285 KVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSE-CYPDVVTFT 343
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
+ Y G+ E + M + LK + + L+ YA G + ++ + N
Sbjct: 344 TIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKN 403
Query: 262 ---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P + + + A+GK K E+A VF+ M + K + Y AL+ Y +L++
Sbjct: 404 GFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEA 463
Query: 319 KDLVKQMAESGCH-----------------------------------IGPLAWDALVKL 343
+++ +M +G + A+++ +
Sbjct: 464 VEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGS 523
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD------------------------- 378
++ GE +KA S L +A + K KP +Y +++
Sbjct: 524 YLSVGEYDKALS-LYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPL 582
Query: 379 ----------QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIR 426
Y+K+G + E +F +M+ VG + ++ AY A+ A +
Sbjct: 583 SKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALF 642
Query: 427 DRMRADNVFPNKALAAQVAQVDAFRK 452
M D+V P+ + + + AF K
Sbjct: 643 LEMETDDVQPDSIACSSLMR--AFNK 666
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 179/420 (42%), Gaps = 26/420 (6%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL----ETNKKLDFIERDYAS 65
S + K EEG ++S ++ ++ G A W E + L+ I Y +
Sbjct: 367 SCVRKMKEEGIEMSLVTYSILVSGFAKT---GNAESADHWFQEAKEKHSSLNAI--IYGN 421
Query: 66 CLDLIAKLRGLQKAESYIQKIPE-SFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
+ + + KAE+ ++++ E + +Y T++ + K VF R K+ G
Sbjct: 422 IIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECG 481
Query: 124 F--PVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
V ++ C L+ LY +L K K +V ME +K +Y +LI+ + D
Sbjct: 482 LNPSVITYGC--LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWAN 539
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+ E + +GI+PD + + G+ ++A +KEM+ + H+ T R +P
Sbjct: 540 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQK---QRHKPTTRTFMP 596
Query: 241 LY------AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+ E+ KA V + ++ P + A I + K+E+AE + M+
Sbjct: 597 IIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAG 656
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ YT ++ YA K ++ + G + ++AL+K + G ++ A
Sbjct: 657 VSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL 716
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ + QN + F Y +++D +A+RGDI + +M++ G + + + A
Sbjct: 717 AVTKEMSAQNIPRNTF-IYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINA 775
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 173/425 (40%), Gaps = 14/425 (3%)
Query: 23 SRAEIALAMANLRTRRMYGKALQLSEWLET--NKKLDFIERDYASCLDLIAKLRGLQKAE 80
SR E L M N TRR G + E E + ++ Y + + A R +++A
Sbjct: 310 SRKEYGL-MVNYYTRR--GDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEAL 366
Query: 81 SYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY 138
S ++K+ E V Y L++ N + A+ F K+K + + ++ Y
Sbjct: 367 SCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAY 426
Query: 139 -KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
+R + K ++ ME+E + Y ++D D V E K G+ P
Sbjct: 427 CQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSV 486
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWK 256
T L Y G+ KA + KEME +K + T +L+ + +L A+ A
Sbjct: 487 ITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFED 546
Query: 257 LCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
L + DV + I A+ + K++ A K M K K +T+ + ++ +A
Sbjct: 547 LIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGE 606
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
+ K D+ M SGC ++AL+ VE ++EKA+ IL + P +Y
Sbjct: 607 MKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAG-VSPNEHTYT 665
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRAD 432
IM YA GD F ++R G ++ L++A + A + M A
Sbjct: 666 TIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQ 725
Query: 433 NVFPN 437
N+ N
Sbjct: 726 NIPRN 730
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEV-VYRTLLANCVAGNNVKKAEEVFN 117
E Y + + A L KA +Y K+ E + +V Y LL C ++ A V
Sbjct: 661 EHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 720
Query: 118 RMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M + P +F N L+ + +R D + AD++ M++E V+ +Y I+ ++
Sbjct: 721 EMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAG 780
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D+ + +E MKS G++P+ T L + EKA + +EM+ LK R
Sbjct: 781 DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYH 840
Query: 237 LLL 239
L+
Sbjct: 841 CLM 843
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/294 (18%), Positives = 116/294 (39%), Gaps = 37/294 (12%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K ++ Y ++++ + D+ + E M++ GIEP S L Y G E+A +
Sbjct: 308 KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALS 367
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
+++M+ + ++ T +L+ +A+ G A
Sbjct: 368 CVRKMKEEGIEMSLVTYSILVSGFAKTGNA------------------------------ 397
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
E A+ F+ + L+ Y ++ Y + K + LV++M E G +
Sbjct: 398 --ESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYH 455
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + G+ +K ++ + ++ P +Y +++ YAK G + ++ M
Sbjct: 456 TMMDGYTMVGDEDKC-LLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEH 514
Query: 399 VGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAF 450
G K + L+ ++ K A+ I + + D + P+ L + + AF
Sbjct: 515 AGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNI--ITAF 566
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 4/205 (1%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTL 99
KAL + + + + + + A L L+ K R ++KAE + ++ + E Y T+
Sbjct: 609 KALDVFDMMRMSGCIPTVHTYNALILGLVEK-RKMEKAEQILDEMTLAGVSPNEHTYTTI 667
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENV 158
+ + + KA F +++D+G + + LL + + + A V M +N+
Sbjct: 668 MHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNI 727
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
F Y ILID + D+ +++ MK EG++PD T G ++A
Sbjct: 728 PRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATK 787
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYA 243
++EM+ +K + T L+ +A
Sbjct: 788 TIEEMKSVGVKPNVKTYTTLINGWA 812
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 33/259 (12%)
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR-KEKAEAMLKEMEGDNLKEHR-- 232
+ LT ++A++ +G+E +L G R KEK + + MEGD+ E+R
Sbjct: 217 DGLTADKSAIKAVEFDGVEFHGR---VLTVKLDDGRRLKEKTDERARWMEGDDSVEYRSH 273
Query: 233 WTCRLLLPLYAELGKADQVARIWKLCESNP--WLDVCMA--------------AIEAWGK 276
W + E KA R K+ E+ P W V A + + +
Sbjct: 274 W--------HEERDKARNGLR--KVIETEPENWQAVVSAFERIKKPSRKEYGLMVNYYTR 323
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+ A F++M + S+ YT L+ YA + + + V++M E G + +
Sbjct: 324 RGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVT 383
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ LV + G E AD +A++++ Y I+ Y +R ++ E + M
Sbjct: 384 YSILVSGFAKTGNAESADHWFQEAKEKHSSLNAI-IYGNIIYAYCQRCNMDKAEALVREM 442
Query: 397 RQVGYVARFKQFQTLVQAY 415
+ G A + T++ Y
Sbjct: 443 EEEGIDAPIDIYHTMMDGY 461
>gi|9955532|emb|CAC05471.1| putative protein [Arabidopsis thaliana]
Length = 402
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 158/338 (46%), Gaps = 26/338 (7%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P S + L K+ EGN ++ E+ LR R Y AL+ E K+ + DY
Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEHEE-----SKIS--DADY 119
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNR-MKDK 122
AS +DLI+K+ G+ AE Y + + + Y +LL A ++AE +F R ++
Sbjct: 120 ASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESD 179
Query: 123 GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
+ N+++ LY + + +KV +V+ +++++ V F+Y + + + ++ +
Sbjct: 180 SLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDEL 239
Query: 182 DQVVEAMKSEGIEPDSSTQAI-LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW-TCRLLL 239
+++E M+ + + + I L Y++ R AE+ L ++ + W T L+
Sbjct: 240 RKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLM 299
Query: 240 PLYAELGKADQVARIWK-LCESNPWLD----VCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ LG + +IWK L +N L +C+ + ++ L + EAE + + W
Sbjct: 300 ILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICV--LSSYLMLGHLREAEEIIHQ----W 353
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
K+ T + A A ++L+ +D+ + SG H+
Sbjct: 354 KESKTTEFDA----SACLRILNAFRDVGLEGIASGFHL 387
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 107/261 (40%), Gaps = 27/261 (10%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI---LAKHYVS 209
+E E K++ Y ID+ + + G+D EG++ DS T L Y +
Sbjct: 107 LEHEESKISDADYASRIDLISK---VFGIDAAERYF--EGLDIDSKTAETYTSLLHAYAA 161
Query: 210 GGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-------- 260
+ E+AEA+ K + E D+L T ++ LY +G+ ++V + ++ +
Sbjct: 162 SKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIF 221
Query: 261 --NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
N WL C A +L K+ E ++ W + Y L +Y + ++
Sbjct: 222 TYNLWLSSCAATFNI-DELRKILEEMRHDASSNEGWVR-----YIDLTSIYINSSRVTNA 275
Query: 319 KDLVKQMAE-SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ + AE S + +D L+ LH G D I + N+ SY+ ++
Sbjct: 276 ESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSS-RSYICVL 334
Query: 378 DQYAKRGDIHSTEKIFHRMRQ 398
Y G + E+I H+ ++
Sbjct: 335 SSYLMLGHLREAEEIIHQWKE 355
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 149/354 (42%), Gaps = 23/354 (6%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFS 164
G V A + + + GF V +A ++ + + + A ++ ME+ K T +
Sbjct: 178 GGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLIT 237
Query: 165 YKILIDIKGQS----NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
Y +++++ G+ N + G+ V+ MKS GI PDS T L G E+A +L
Sbjct: 238 YNVILNVYGKMGMPWNKMVGL---VDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVL 294
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKL 277
KEM+ + T LL +Y + ++ + + + E N P + + I A+ +
Sbjct: 295 KEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARD 354
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+E+A + +M + K YT LL + + ++M GC +
Sbjct: 355 GLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTF 414
Query: 338 DALVKLHVEGGEVEKADSIL--LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
+AL+K+H G+ + + +K Q + P ++ ++ + + G +F
Sbjct: 415 NALIKMHGNRGKFTEMMKVFEDIKTFQCS---PDIVTWNTLLSVFGQNGMDSEVSGVFKE 471
Query: 396 MRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFP-----NKALAA 442
M++ G+V F TL+ +Y + A + RM V P N LAA
Sbjct: 472 MKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAA 525
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 152/362 (41%), Gaps = 13/362 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI-----PESFRGEVVYRTLLANCVAGNNVKKAEEVFN 117
Y + LD+ K R ++A +Q++ P S V Y +L++ ++ A E+ N
Sbjct: 309 YNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSI---VTYNSLISAYARDGLLEDALELKN 365
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSN 176
+M +KG F LL +++ K K A + M E K ++ LI + G
Sbjct: 366 QMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRG 425
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
T M +V E +K+ PD T L + G + + KEM+ R T
Sbjct: 426 KFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFN 485
Query: 237 LLLPLYAELGKADQVARIWK-LCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
L+ Y+ G DQ ++K + E+ NP L A + A + +++E V M
Sbjct: 486 TLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDG 545
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K + Y +LL YA+ K + + L +++ + LV ++ + + +
Sbjct: 546 RCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMET 605
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ L+ +Q+ F P ++ ++ Y +R + +I M++ G+ + +L+
Sbjct: 606 ERAFLELRQRG-FSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMY 664
Query: 414 AY 415
Y
Sbjct: 665 MY 666
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 132/305 (43%), Gaps = 9/305 (2%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
P+S+ Y TL++ C GN ++A V MK GF N LL +Y + + K
Sbjct: 269 PDSY----TYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKE 324
Query: 147 A-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
A +VL ME + +Y LI + L ++ M +GI+PD T L
Sbjct: 325 AMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLS 384
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNP 262
+ G+ + A + +EM + K + T L+ ++ GK ++ +++ K + +P
Sbjct: 385 GFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSP 444
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
+ + +G+ E VFK M + + L+ Y+ + +
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY 504
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
K+M E+G + +++A++ GG ++++ +L + + + KP +Y ++ YA
Sbjct: 505 KRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAE-MKDGRCKPNELTYCSLLHAYAN 563
Query: 383 RGDIH 387
+I
Sbjct: 564 GKEIE 568
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 7/256 (2%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I I G+ ++ ++ + +G + D + + S GR +A + K+ME
Sbjct: 170 VIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEV 229
Query: 227 NLKEHRWTCRLLLPLYAELGKA--DQVARIWKLCESN--PWLDVCMAAIEAWGKLNKVEE 282
K T ++L +Y ++G V + ++ + P I + N EE
Sbjct: 230 GCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEE 289
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A V K M Y ALL VY + + +++++M +GC + +++L+
Sbjct: 290 AAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLIS 349
Query: 343 LHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G +E D++ LK Q K KP +Y ++ + K G + +IF MR G
Sbjct: 350 AYARDGLLE--DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGC 407
Query: 402 VARFKQFQTLVQAYIN 417
F L++ + N
Sbjct: 408 KPNICTFNALIKMHGN 423
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 151/338 (44%), Gaps = 16/338 (4%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAE--EVFNRMKDKGFPVTSFACNQLLILYKRLDKK 144
PE+F + + G + K AE +VF M G +T+ N ++ +Y + +
Sbjct: 229 PETFNTMISFY--------GEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKAGRT 280
Query: 145 KVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
+ A++L+ + ++++ +Y LI++ +++ L + +E M+ G+ PD T
Sbjct: 281 REAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRT 340
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
L Y + KAEA+++EMEG + +++ +Y + +++ S
Sbjct: 341 LISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESVFRFLHSRG 400
Query: 263 WLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
L+V + ++ + + +++A VF+ ++K + Y ++K Y +
Sbjct: 401 GLEVSTYVGVMDVYAEHKCLDQAREVFE-LAKNAGLKTPSLYNVMMKAYGACDRFTDAVT 459
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
+ + M + G ++++L++L +G +E +L+ + FKP +S ++ Y
Sbjct: 460 VFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAG-FKPSLASCSSVVSFY 518
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
G + E++F M G A + L+ AY A
Sbjct: 519 GDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEA 556
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 137/310 (44%), Gaps = 9/310 (2%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLL 151
+V +RTL++ A N V KAE + M+ GF + ++ +Y R D K V
Sbjct: 335 QVTFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESVFR 394
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ L +Y ++D+ + L +V E K+ G++ S ++ K Y +
Sbjct: 395 FLHSRG-GLEVSTYVGVMDVYAEHKCLDQAREVFELAKNAGLK-TPSLYNVMMKAYGACD 452
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCM 268
R A + + ME D + + L+ L + + + R+ L ++ P L C
Sbjct: 453 RFTDAVTVFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCS 512
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ + +G + +V EAE VFK M + + Y+ALL YA+ + + + + +
Sbjct: 513 SVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAA 572
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + + +++KL+ G +A+ I ++ ++ P + +++ Y K G
Sbjct: 573 GFVPDTIVYTSMMKLYSNLGLTAEAEKIY---EEISRLSPDVFAANTMLNLYIKSGMFTE 629
Query: 389 TEKIFHRMRQ 398
E++F M++
Sbjct: 630 AEQLFRAMQR 639
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 107/245 (43%), Gaps = 15/245 (6%)
Query: 211 GRKEKAEAMLK---EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDV 266
GR K E + K EM G+ + +T +L+ ++ G D+ R ++ + ES D
Sbjct: 128 GRAAKWELLQKYWSEMLGERVPPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDE 187
Query: 267 CMAA--IEAWGKLNKVEEAEAVFKRM-------SKTWKKLSTKHYTALLKVYADHKMLSK 317
M + + + +EEAE F + T + + + + ++ Y +H ++
Sbjct: 188 VMVSTYMNLQRRFGDLEEAEKAFWGLFSENLVDGTTKRPENPETFNTMISFYGEHAKFAE 247
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ +M ++G + + ++A++ ++ + G +A+ ++ K +Q+ P ++Y ++
Sbjct: 248 ASKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLI 307
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVF 435
+ Y K + RMR G F+TL+ AY N A + M F
Sbjct: 308 EMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEMEGSGFF 367
Query: 436 PNKAL 440
++A+
Sbjct: 368 IDQAM 372
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 138/338 (40%), Gaps = 57/338 (16%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS---STQAILAKHYVS 209
M E V T F+Y IL+D+ G++ + M G+EPD ST L + +
Sbjct: 143 MLGERVPPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRF-- 200
Query: 210 GGRKEKAEAMLKEMEGDNL-------KEHRWTCRLLLPLYAELGKADQVARIW-KLCESN 261
G E+AE + +NL E+ T ++ Y E K + ++++ ++ ++
Sbjct: 201 -GDLEEAEKAFWGLFSENLVDGTTKRPENPETFNTMISFYGEHAKFAEASKVFAEMMKAG 259
Query: 262 PWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSK---------TWKKLSTKH--------- 301
L A I +GK + EAE + +M + T+ L +
Sbjct: 260 VELTTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELV 319
Query: 302 ------------------YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+ L+ YA + ++ K + LV++M SG I + ++ +
Sbjct: 320 SGCLERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAM 379
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+V +V KA+S+ + + S+Y+ +MD YA+ + ++F + G +
Sbjct: 380 YVRARDVSKAESVFRFLHSRGGLE--VSTYVGVMDVYAEHKCLDQAREVFELAKNAG-LK 436
Query: 404 RFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPNKA 439
+ +++AY + T A + + M D PN+A
Sbjct: 437 TPSLYNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEA 474
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/294 (19%), Positives = 124/294 (42%), Gaps = 3/294 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
Y +D+ A+ + L +A + + + +Y ++ A + A VF M+
Sbjct: 407 YVGVMDVYAEHKCLDQAREVFELAKNAGLKTPSLYNVMMKAYGACDRFTDAVTVFEAMEK 466
Query: 122 KGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G + N L+ +L K + + VL+L++ K + S ++ G +
Sbjct: 467 DGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVRE 526
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
++V + M + G+E D + L Y G +A+ L ++ ++
Sbjct: 527 AERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMK 586
Query: 241 LYAELGKADQVARIWK-LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
LY+ LG + +I++ + +P + + + K EAE +F+ M + L+
Sbjct: 587 LYSNLGLTAEAEKIYEEISRLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNE 646
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
T +LK+Y + + +G D+ + M+ A++ ++ ++V+ G + +A
Sbjct: 647 VACTMMLKLYREAGKIEQGLDVARVMSRRFLITDARAFNGVIAMYVKAGLMREA 700
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/241 (17%), Positives = 107/241 (44%), Gaps = 6/241 (2%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLL 151
E + +L+ G ++ + V +K GF + +C+ ++ Y + + + A+ V
Sbjct: 473 EASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFK 532
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M V+ Y L++ ++ Q ++++K+ G PD+ + K Y + G
Sbjct: 533 EMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLG 592
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE-SNPWLD--VCM 268
+AE + +E+ L + +L LY + G + ++++ + P L+ C
Sbjct: 593 LTAEAEKIYEEI--SRLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACT 650
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
++ + + K+E+ V + MS+ + + + ++ +Y ++ + + +K+M +
Sbjct: 651 MMLKLYREAGKIEQGLDVARVMSRRFLITDARAFNGVIAMYVKAGLMREALEALKEMRRA 710
Query: 329 G 329
G
Sbjct: 711 G 711
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 144/346 (41%), Gaps = 7/346 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L ++ L+ AE + ++ + E Y L+ + A +
Sbjct: 300 RAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G +S+ +++L ++ R D +K VL M+ V+ + Y ++ID G+ N
Sbjct: 360 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L M+ EGIEPD T L + GGR ++A + +EM N T +
Sbjct: 420 LGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNI 479
Query: 238 LLPLYAELGKADQV-ARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ L E + V A + ++ E P + ++ +G+ + +EA + M
Sbjct: 480 MINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADG 539
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S Y AL+ YA + ++VK M G + L ++L+ E V +A
Sbjct: 540 LKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAF 599
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
S+ L+ ++N +P +Y +M + I+ M G
Sbjct: 600 SV-LQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSY 165
N + A + FN+M+++G N L+ + + + + A++ M + N +Y
Sbjct: 418 NCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTY 477
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 478 NIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKA 537
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM----AAIEAWGKLNKVE 281
D LK L+ YA+ G AD + K +++ L+V + + I A+G+ +V
Sbjct: 538 DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKAD-GLEVSILVLNSLINAFGEDRRVV 596
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
EA +V + M + + YT L+K + K + ++M SGC
Sbjct: 597 EAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGC 645
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 131/343 (38%), Gaps = 47/343 (13%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
+K +Y L+ + L +QV++ M G+ PD +T ++L Y GR E A
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAW 274
+LKEME D +K + +L + + G KA V R + P I+ +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK N + A F +M + + + L+ + + +L ++M ES C G
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 335 LAWDALVKL-----HVEGGEV-------------------------------EKADSILL 358
++ ++ L H EG E E D I
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI-- 532
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+A + + KP + Y +++ YA+RG + M+ G +L+ A+
Sbjct: 533 EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGED 592
Query: 419 K--TPAYGIRDRMRADNVFPN----KALAAQVAQVDAFRKTAV 455
+ A+ + MR + + P+ L + +V+ F K V
Sbjct: 593 RRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPV 635
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGK 319
P + A I A G +V EAEA+F + K T+ Y ALLK Y L +
Sbjct: 260 TPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAE 319
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML--IM 377
++ +M++ G + LV + G E A ILLK + + KP SSY+ I+
Sbjct: 320 QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA-RILLKEMEADGVKP--SSYVFSRIL 376
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVF 435
+ RGD + M+ G + ++ + N A ++MR + +
Sbjct: 377 AGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIE 436
Query: 436 PN 437
P+
Sbjct: 437 PD 438
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 159/389 (40%), Gaps = 48/389 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDKKKVADVLLL 152
VY +++ N K VF R+K+ GF + S+ C LL LY ++ K VA L +
Sbjct: 406 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGC--LLNLYVKIGK--VAKALSI 461
Query: 153 ---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
ME +K +Y +LI+ +D + E M G++PD + +L + +
Sbjct: 462 SKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCK 521
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM- 268
G ++A +L++M+ + ++ R ++ YA G L + + M
Sbjct: 522 MGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMT 581
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A I + +KV+ A +V +MS + YT +++ YA + K + ++
Sbjct: 582 YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 641
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSI------------------------------ 356
ESG + ++ L++ + G ++ A ++
Sbjct: 642 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 701
Query: 357 ----LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L+K +++ P +Y ++ K GD+ EK+ M VG K + TL+
Sbjct: 702 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 761
Query: 413 QAYINAKTPAYGIR--DRMRADNVFPNKA 439
+ + P ++ + M+ + P++A
Sbjct: 762 KGWARVSLPDRALKCFEEMKLAGLKPDEA 790
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 154/358 (43%), Gaps = 42/358 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIP---ESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
Y+ + AK+ Q A++ ++ S G + + A+C +GN +++AEE+ M
Sbjct: 337 YSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGN-MERAEELVREM 395
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
++ G + ++ Y +++ EN K L+
Sbjct: 396 EEDGIDAPIDVYHSMMHGYT------------IIQNEN--------KCLV---------- 425
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V E +K G +P + L YV G+ KA ++ KEME +K + T +L+
Sbjct: 426 ----VFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLI 481
Query: 240 PLYAELGK-ADQVARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ L A+ A ++ S P + IEA+ K+ ++ A + ++M K +
Sbjct: 482 NGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQ 541
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
S + + +++ YA + D + M SGC + ++AL+ V +V++A S+
Sbjct: 542 PSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSV 601
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L K P +Y +IM YA GDI + F ++++ G ++TL++A
Sbjct: 602 LDKMSIAG-ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 658
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 135/347 (38%), Gaps = 43/347 (12%)
Query: 134 LLILY--KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+I+Y KR DK M ++ F + L+ + D+ G VE MKSE
Sbjct: 269 LMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE 328
Query: 192 GIEPDSSTQAILAKHY-----------------------------------VSGGRKEKA 216
G+E T +IL + G E+A
Sbjct: 329 GLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERA 388
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEA 273
E +++EME D + ++ Y + ++ ++ K C P + +
Sbjct: 389 EELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNL 448
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K+ KV +A ++ K M K + K Y+ L+ + + + ++M SG
Sbjct: 449 YVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPD 508
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++ L++ + G +++A IL K Q++ + +P ++ I++ YA GD+ S
Sbjct: 509 RAIYNLLIEAFCKMGNMDRAICILEKMQKE-RMQPSNRAFRPIIEGYAVAGDMKSALDTL 567
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNK 438
MR+ G V + L+ + A + D+M + PN+
Sbjct: 568 DLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNE 614
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 102/250 (40%), Gaps = 4/250 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLME 154
+R ++ ++K A + + M+ G T N L+ L ++ ++ VL M
Sbjct: 547 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 606
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + +Y I++ S D+ + +K G++ D L + GR +
Sbjct: 607 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQ 666
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAI 271
A A+ +EM + + + +L+ +A G +A+ + + K P + + I
Sbjct: 667 SALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYI 726
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
A K ++ AE V + M K + K YT L+K +A + + ++M +G
Sbjct: 727 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 786
Query: 332 IGPLAWDALV 341
++ LV
Sbjct: 787 PDEASYHCLV 796
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNR 118
Y + + + + +Q+A S + K+ S G E Y ++ A ++ KA E F +
Sbjct: 582 YNALIHGLVRKHKVQRAVSVLDKM--SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK 639
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSND 177
+K+ G + + LL + + + A V M + + F Y ILID + D
Sbjct: 640 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 699
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + +++ MK +G+ P+ T G ++AE +++EM LK + T
Sbjct: 700 VWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTT 759
Query: 238 LLPLYAELGKADQVARIWK 256
L+ +A + D+ + ++
Sbjct: 760 LIKGWARVSLPDRALKCFE 778
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 115/267 (43%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y LI+ G S + V + M G+ PD T I+ Y G +
Sbjct: 223 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQ 282
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
K + + M+G N++ T +++ +LG+ + I+ K E P +
Sbjct: 283 YSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTF 342
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
I + ++E + F M K + Y AL+ YA H M + + ++ +
Sbjct: 343 TTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKK 402
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G H +++ +L+ + + G+ EKA + + ++N KP SY ++D Y +G +
Sbjct: 403 NGFHPDVVSYTSLLNAYGKSGKPEKAMKV-FELMRRNHCKPNLVSYNALIDAYGSKGLLT 461
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+I H M + G TL+ A
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLLAA 488
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 114/272 (41%), Gaps = 4/272 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y L+ + K+A VFN +K GF + LL Y + K +K V L
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + K SY LID G LT +++ M+ G++P+ + L G+
Sbjct: 435 MRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGRCGQ 494
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
K K +++L E +K + + Y +G+ D+ +++ + P
Sbjct: 495 KVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNV 554
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K++K EA M LS + Y++++ Y+ +++ + + +M G
Sbjct: 555 LISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVG 614
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
C + + A++ + EKA ++ L+ +
Sbjct: 615 CRPDVITYTAMIHAYDVAENWEKASALFLEME 646
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 167/446 (37%), Gaps = 86/446 (19%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-K 144
IP S Y L+ C + N K+A V +M + G N +L YKR ++
Sbjct: 228 IPPS---RSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYS 284
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIK---GQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
KV LM+ N++ + I+I GQ+ + ++ +SE PD T
Sbjct: 285 KVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSE-CYPDVVTFT 343
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
+ Y G+ E + M + LK + + L+ YA G + ++ + N
Sbjct: 344 TIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKN 403
Query: 262 ---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P + + + A+GK K E+A VF+ M + K + Y AL+ Y +L++
Sbjct: 404 GFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEA 463
Query: 319 KDLVKQMAESGCH-----------------------------------IGPLAWDALVKL 343
+++ +M +G + A+++ +
Sbjct: 464 VEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGS 523
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD------------------------- 378
++ GE +KA S L +A + K KP +Y +++
Sbjct: 524 YLSVGEYDKALS-LYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPL 582
Query: 379 ----------QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIR 426
Y+K+G + E +F +M+ VG + ++ AY A+ A +
Sbjct: 583 SKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALF 642
Query: 427 DRMRADNVFPNKALAAQVAQVDAFRK 452
M D+V P+ + + + AF K
Sbjct: 643 LEMETDDVQPDSIACSSLMR--AFNK 666
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 159/387 (41%), Gaps = 44/387 (11%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDK-KKVADVLL 151
VY +++ + KK VF R+K+ GF + S+ C L+ LY ++ K K V
Sbjct: 395 VYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGC--LINLYVKIGKVPKALAVSK 452
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME +K +Y +LI+ +D + E M G++PD + +L + + G
Sbjct: 453 EMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMG 512
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCM 268
++A + + M+ + ++ T R ++ +A G +A + + P +
Sbjct: 513 NMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYN 572
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I + ++VE A +V +MS + YT +++ YA + K + ++ ES
Sbjct: 573 ALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 632
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSI-------------------------------- 356
G + ++ L++ + G ++ A ++
Sbjct: 633 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEA 692
Query: 357 --LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L+K +++ P ++ ++ K GD+ E + M VG K F TL++
Sbjct: 693 ADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKG 752
Query: 415 YINAKTPAYGIR--DRMRADNVFPNKA 439
+ P ++ + M++ + P++A
Sbjct: 753 WAKVSLPDRALKCFEEMKSAGLKPDEA 779
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 153/367 (41%), Gaps = 44/367 (11%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
P +F V+ +L+ +++ A MK +G +T + L+ Y + + +
Sbjct: 286 PNAF----VFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAES 341
Query: 147 ADVLLLMEKENV-KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE----------- 194
AD L K + L Y +I QS ++ +++V M+ +GI+
Sbjct: 342 ADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMH 401
Query: 195 ------------------------PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
P + L YV G+ KA A+ KEME +K
Sbjct: 402 GYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKH 461
Query: 231 HRWTCRLLLPLYAELGKADQVARIWK-LCESN--PWLDVCMAAIEAWGKLNKVEEAEAVF 287
+ T +L+ + L I++ + +S P + +EA+ K+ ++ A +F
Sbjct: 462 NNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIF 521
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+RM K + S + + +++ +A + + D + M SGC + ++AL+ +
Sbjct: 522 ERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRK 581
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+VE+A S+L K P +Y +IM YA GDI + F ++++ G
Sbjct: 582 HQVERAVSVLDKMSIAG-IAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 640
Query: 408 FQTLVQA 414
++TL++A
Sbjct: 641 YETLLRA 647
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 123/289 (42%), Gaps = 10/289 (3%)
Query: 134 LLILY--KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+++Y KR DK M ++ F + L+ + D+ G VE MKSE
Sbjct: 258 LMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE 317
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG--DNLKEHRWTCRLLLPLYAELGKAD 249
G+E T +IL Y E A+ + KE + DNL ++ ++ + + G D
Sbjct: 318 GLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSN--IIHAHCQSGNMD 375
Query: 250 QVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+ + + E + +DV + + + ++ VF+R+ + + S Y L+
Sbjct: 376 RAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLI 435
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
+Y + K + K+M G + L+ + + A SI + ++
Sbjct: 436 NLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSI-FEDMIKSGL 494
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+P + Y L+++ + K G++ +IF RM++ + F+ +++ +
Sbjct: 495 QPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGF 543
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 35/257 (13%)
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E M++ GIEP++ L Y A + ++EM+ + L+ T +L
Sbjct: 277 ENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSIL------- 329
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
I +GK N E A+ +FK L+ Y+ +
Sbjct: 330 -------------------------IAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNI 364
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ + + + ++LV++M E G + +++ + + EK I+ + ++
Sbjct: 365 IHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQD-EKKCLIVFERLKECG 423
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAY 423
F+P SY +++ Y K G + + M G K + L+ +I+ A+
Sbjct: 424 FRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAF 483
Query: 424 GIRDRMRADNVFPNKAL 440
I + M + P++A+
Sbjct: 484 SIFEDMIKSGLQPDRAI 500
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLL 151
E Y ++ A ++ KA E F ++K+ G + + LL + + + A V
Sbjct: 603 EHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR 662
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + + F Y ILID + D+ +++ MK +GI P+ T G
Sbjct: 663 EMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAG 722
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
++AE +++EM LK + T L+ +A++ D+ + ++
Sbjct: 723 DMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFE 767
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 174/406 (42%), Gaps = 13/406 (3%)
Query: 20 NDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQK- 78
++L R ++ + L + +A+ L EWL + ++ D+ +++ ++ G +
Sbjct: 132 SELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDH-QVIEIFVRILGRESQ 190
Query: 79 ---AESYIQKIP--ESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
A + KIP E Y T+L +KA ++F RMK+ G T N
Sbjct: 191 YSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNV 250
Query: 134 LLILYKRLDK--KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
+L ++ ++ + +K+ VL M + +K +F+ ++ + L + +KS
Sbjct: 251 ILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSC 310
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
G EP + T L + + G +A ++LKEME ++ T L+ Y G + +
Sbjct: 311 GYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEA 370
Query: 252 ARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
A + ++ P I+A+GK K +EA +F M + +T Y A+L +
Sbjct: 371 AGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL 430
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
++ ++ M +GC W+ ++ L G ++K + + + + F+P
Sbjct: 431 LGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG-MDKFVNRVFREMKSCGFEP 489
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ ++ Y + G K++ M + G+ A + L+ A
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 172/404 (42%), Gaps = 31/404 (7%)
Query: 53 NKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVK 110
+K L F E ++ L A+ L++A+ + ++ G V Y LL
Sbjct: 274 SKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYT 333
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILI 169
+A V M++ P S N+L+ Y R K+ A V+ +M K+ V +Y +I
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSST-QAILAKHYVSGGRKEKAEAMLK---EMEG 225
D G++ ++ +MK G P++ T A+L+ G+K ++ M+K +M+
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLL----GKKSRSNEMIKMLCDMKS 449
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ +R T +L L G V R++ K C P D I A+G+ +
Sbjct: 450 NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 509
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A ++ M++ Y ALL A G++++ M G ++ +++
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ 569
Query: 343 LHVEGGE---VEKADSILLKAQQQNKFKPMFSSYM----LIMDQYAKRGDIHSTEKIFHR 395
+ +GG +E+ ++ + + Q +F S+M L++ + R + +E+ F
Sbjct: 570 CYAKGGNYLGIERIENRIKEGQ-------IFPSWMLLRTLLLANFKCRA-LAGSERAFTL 621
Query: 396 MRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPN 437
++ GY F +++ + N A GI + +R D + P+
Sbjct: 622 FKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 126/325 (38%), Gaps = 40/325 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-M 153
+ T+LA C K VF MK GF N L+ Y R + A + M
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ +Y L++ + D + V+ MKS+G +P ++ +++ + Y GG
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 214 ---EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
E+ E +KE Q+ W L +
Sbjct: 578 LGIERIENRIKE--------------------------GQIFPSWMLLRT---------L 602
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ A K + +E F K K + ++L ++ + M + + +++ + E G
Sbjct: 603 LLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGL 662
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ +++L+ ++V GE KA+ I LK ++++ KP SY ++ + +RG +
Sbjct: 663 SPDLVTYNSLMDMYVRRGECWKAEEI-LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
++ M + G + T V Y
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGY 746
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 120/311 (38%), Gaps = 38/311 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLANCVA-GNNVKKAEEVFNRMK 120
Y + L+ +A+ + E+ I + + F+ +L+ C A G N E + NR+K
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 121 D-KGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + FP LL +K L +K K + ++ I ++N
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ ++E+++ +G+ PD T L YV G KAE +LK +E LK
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK---------- 698
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
P L I+ + + ++EA + M++ +
Sbjct: 699 ----------------------PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCI 736
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y + Y M ++ +D+++ MA++ C L + +V + G+ +A + K
Sbjct: 737 FTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
Query: 360 AQQQNKFKPMF 370
+ F P F
Sbjct: 797 IKT---FDPCF 804
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 161/371 (43%), Gaps = 10/371 (2%)
Query: 58 FIERDYASCLDLIA---KLRGLQKAESYIQKIP-ESFRGEV-VYRTLLANCVAGNNVKKA 112
F +D A + +IA KL+ Q AE + + F G Y LL+ N ++A
Sbjct: 630 FEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERA 689
Query: 113 EEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDI 171
+ M G + N +L + R K K++++ + + + ++ ++
Sbjct: 690 TRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHA 749
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
++ +L + M+ G P L Y + AE ++K+++ L+
Sbjct: 750 FSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELD 809
Query: 232 RWTCRLLLPLYAELGKADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
++ LY++LG + A ++K + +P I + + V+EA+A+ +
Sbjct: 810 MDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLR 869
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M KT + YT L+ Y + + + K +AE+GC A++ ++ ++ + G
Sbjct: 870 EMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAG 929
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
E K + + ++ + + F+P ++ ++MD Y K G E++ + ++G +
Sbjct: 930 EHRKIEEV-IEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHY 988
Query: 409 QTLVQAYINAK 419
+++ +++N K
Sbjct: 989 TSIINSHLNNK 999
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 112/260 (43%), Gaps = 7/260 (2%)
Query: 145 KVADVLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
+++D +L+ M+++ ++Y +I + G++ + + M+ +G PD+ T
Sbjct: 200 RLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYN 259
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLC 258
+ + GR E+ E + M T ++ +Y + G KA+++ K
Sbjct: 260 SVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEE 319
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P I+ GK V EA A+F+ M K+ + + + ++A++ YA M S
Sbjct: 320 GRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDA 379
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ M +G LA+ ++ + + EK IL KA + KP S Y +++
Sbjct: 380 EHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKC-IILYKAMVGSGLKPELSVYAIMVR 438
Query: 379 QYAKRGDIHSTEKIFHRMRQ 398
+ ++ + E + M Q
Sbjct: 439 VFYQKSSLAEIENLSKEMVQ 458
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T Y L+ + + LS + ++M GC ++A++ ++ G VE A SI
Sbjct: 185 TITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFR 244
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Q+Q F P +Y ++ +A+ G I E+I MR + + T++ Y
Sbjct: 245 IMQEQG-FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMY 300
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 6/172 (3%)
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
EL + VAR + NP + M ++ G+ N+ A+ +F R + + Y
Sbjct: 65 ELYECLNVARWYA---PNPRMLAVMLSV--LGRANQPGLAQELFDRAESSIGN-CVQVYN 118
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
+L+ VYA H + + L+ +M + GC + ++ ++K GG E S LL+
Sbjct: 119 SLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYA 178
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+P +Y ++ + + IF M++ G + ++ Y
Sbjct: 179 AGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVY 230
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 149/331 (45%), Gaps = 13/331 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDKKKVADVLLL- 152
Y +++ + KK VF R+K+ F + S+ C L+ LY ++ K VA + +
Sbjct: 420 YHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGC--LINLYVKIGK--VAKAIAIS 475
Query: 153 --MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
ME +K +Y +LI +D T ++ E M G++PD + +L + +
Sbjct: 476 KEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKM 535
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVC 267
G ++A +L++M+ + ++ R ++ +A G + I L + P +
Sbjct: 536 GNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTY 595
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
A I + N+VE A +V +MS + YT +++ YA ++K + ++ E
Sbjct: 596 NALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKE 655
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G + ++ L++ + G ++ A ++ + Q + F Y +++D +A+RGD+
Sbjct: 656 GGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTF-VYNILIDGWARRGDVW 714
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ +M++ G + + + A A
Sbjct: 715 EAADLMKQMKEDGVPPNIHTYTSYINACCKA 745
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 134/347 (38%), Gaps = 43/347 (12%)
Query: 134 LLILY--KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+I+Y KR DK M ++ F + L+ + D+ G E MK+E
Sbjct: 282 LMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAE 341
Query: 192 GIEPDSSTQAILAKHY-----------------------------------VSGGRKEKA 216
GIE T +IL + G ++A
Sbjct: 342 GIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRA 401
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEA 273
E ++ EME D + ++ Y + + ++ K C P + I
Sbjct: 402 EELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINL 461
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K+ KV +A A+ K M + K + K Y+ L+ + + + ++M +SG
Sbjct: 462 YVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPD 521
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++ L++ + G +++A IL K Q++ + +P ++ I++ +A GD+ I
Sbjct: 522 RAIYNLLIEAFCKMGNMDRAIRILEKMQKE-RMQPSNRAFRPIIEGFAVAGDMKRALDIL 580
Query: 394 HRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNK 438
MR+ G + L+ I N A + ++M + PN+
Sbjct: 581 DLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNE 627
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 104/250 (41%), Gaps = 4/250 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLME 154
+R ++ ++K+A ++ + M+ G T N L+ L ++ ++ VL M
Sbjct: 560 FRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMS 619
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + +Y I++ + D+ + +K G++ D L + GR +
Sbjct: 620 IAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQ 679
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAI 271
A A+ +EM + + + +L+ +A G + A + K + + P + + I
Sbjct: 680 SALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYI 739
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
A K ++ A+ V MS K + K YT L+K +A + + ++M +G
Sbjct: 740 NACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLK 799
Query: 332 IGPLAWDALV 341
A+ LV
Sbjct: 800 PDEAAYHCLV 809
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLL 151
E Y ++ A ++ KA E F ++K+ G + + LL + + + A V
Sbjct: 627 EHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTR 686
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + + F Y ILID + D+ +++ MK +G+ P+ T G
Sbjct: 687 EMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAG 746
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
++A+ ++ EM LK + T L+ +A D+ + ++
Sbjct: 747 DMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFE 791
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 144/346 (41%), Gaps = 7/346 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L ++ L+ AE + ++ + E Y L+ + A +
Sbjct: 300 RAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G +S+ +++L ++ R D +K VL M+ V+ + Y ++ID G+ N
Sbjct: 360 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L M+ EGIEPD T L + GGR ++A + +EM N T +
Sbjct: 420 LGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNI 479
Query: 238 LLPLYAELGKADQV-ARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ L E + V A + ++ E P + ++ +G+ + +EA + M
Sbjct: 480 MINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADG 539
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S Y AL+ YA + ++VK M G + L ++L+ E V +A
Sbjct: 540 LKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAF 599
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
S+ L+ ++N +P +Y +M + I+ M G
Sbjct: 600 SV-LQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSY 165
N + A + FN+M+++G N L+ + + + + A++ M + N +Y
Sbjct: 418 NCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTY 477
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 478 NIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKA 537
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM----AAIEAWGKLNKVE 281
D LK L+ YA+ G AD + K +++ L+V + + I A+G+ +V
Sbjct: 538 DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKAD-GLEVSILVLNSLINAFGEDRRVV 596
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
EA +V + M + + YT L+K + K + ++M SGC
Sbjct: 597 EAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGC 645
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 131/343 (38%), Gaps = 47/343 (13%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
+K +Y L+ + L +QV++ M G+ PD +T ++L Y GR E A
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAW 274
+LKEME D +K + +L + + G KA V R + P I+ +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK N + A F +M + + + L+ + + +L ++M ES C G
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 335 LAWDALVKL-----HVEGGEV-------------------------------EKADSILL 358
++ ++ L H EG E E D I
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI-- 532
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+A + + KP + Y +++ YA+RG + M+ G +L+ A+
Sbjct: 533 EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGED 592
Query: 419 K--TPAYGIRDRMRADNVFPN----KALAAQVAQVDAFRKTAV 455
+ A+ + MR + + P+ L + +V+ F K V
Sbjct: 593 RRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPV 635
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGK 319
P + A I A G +V EAEA+F + K T+ Y ALLK Y L +
Sbjct: 260 TPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAE 319
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML--IM 377
++ +M++ G + LV + G E A ILLK + + KP SSY+ I+
Sbjct: 320 QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA-RILLKEMEADGVKP--SSYVFSRIL 376
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVF 435
+ RGD + M+ G + ++ + N A ++MR + +
Sbjct: 377 AGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIE 436
Query: 436 PN 437
P+
Sbjct: 437 PD 438
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
A AL+ G V +A+++ L+ + KP +Y ++ Y + G + + E++
Sbjct: 265 AVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDE 324
Query: 396 MRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQV 444
M Q G + LV AY A A + M AD V P+ + +++
Sbjct: 325 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRI 375
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 159/389 (40%), Gaps = 48/389 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDKKKVADVLLL 152
VY +++ N K VF R+K+ GF + S+ C LL LY ++ K VA L +
Sbjct: 405 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGC--LLNLYVKIGK--VAKALSI 460
Query: 153 ---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
ME +K +Y +LI+ +D + E M G++PD + +L + +
Sbjct: 461 SKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCK 520
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM- 268
G ++A +L++M+ + ++ R ++ YA G L + + M
Sbjct: 521 MGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMT 580
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A I + +KV+ A +V +MS + YT +++ YA + K + ++
Sbjct: 581 YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 640
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSI------------------------------ 356
ESG + ++ L++ + G ++ A ++
Sbjct: 641 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 700
Query: 357 ----LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L+K +++ P +Y ++ K GD+ EK+ M VG K + TL+
Sbjct: 701 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 760
Query: 413 QAYINAKTPAYGIR--DRMRADNVFPNKA 439
+ + P ++ + M+ + P++A
Sbjct: 761 KGWARVSLPDRALKCFEEMKLAGLKPDEA 789
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 154/358 (43%), Gaps = 42/358 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIP---ESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
Y+ + AK+ Q A++ ++ S G + + A+C +GN +++AEE+ M
Sbjct: 336 YSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGN-MERAEELVCEM 394
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
++ G + ++ Y +++ EN K L+
Sbjct: 395 EEDGIDAPIDVYHSMMHGYT------------IIQNEN--------KCLV---------- 424
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V E +K G +P + L YV G+ KA ++ KEME +K + T +L+
Sbjct: 425 ----VFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLI 480
Query: 240 PLYAELGK-ADQVARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ L A+ A ++ S P + IEA+ K+ ++ A + ++M K +
Sbjct: 481 NGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQ 540
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
S + + +++ YA + D + M SGC + ++AL+ V +V++A S+
Sbjct: 541 PSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSV 600
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L K P +Y +IM YA GDI + F ++++ G ++TL++A
Sbjct: 601 LDKMSIAG-ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 657
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 134/347 (38%), Gaps = 43/347 (12%)
Query: 134 LLILY--KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+I+Y KR DK M ++ F + L+ + D+ G VE MKSE
Sbjct: 268 LMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE 327
Query: 192 GIEPDSSTQAILAKHY-----------------------------------VSGGRKEKA 216
G+E T +IL + G E+A
Sbjct: 328 GLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERA 387
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEA 273
E ++ EME D + ++ Y + ++ ++ K C P + +
Sbjct: 388 EELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNL 447
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K+ KV +A ++ K M K + K Y+ L+ + + + ++M SG
Sbjct: 448 YVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPD 507
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++ L++ + G +++A IL K Q++ + +P ++ I++ YA GD+ S
Sbjct: 508 RAIYNLLIEAFCKMGNMDRAICILEKMQKE-RMQPSNRAFRPIIEGYAVAGDMKSALDTL 566
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNK 438
MR+ G V + L+ + A + D+M + PN+
Sbjct: 567 DLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNE 613
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 102/250 (40%), Gaps = 4/250 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLME 154
+R ++ ++K A + + M+ G T N L+ L ++ ++ VL M
Sbjct: 546 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 605
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + +Y I++ S D+ + +K G++ D L + GR +
Sbjct: 606 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQ 665
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAI 271
A A+ +EM + + + +L+ +A G +A+ + + K P + + I
Sbjct: 666 SALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYI 725
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
A K ++ AE V + M K + K YT L+K +A + + ++M +G
Sbjct: 726 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 785
Query: 332 IGPLAWDALV 341
++ LV
Sbjct: 786 PDEASYHCLV 795
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNR 118
Y + + + + +Q+A S + K+ S G E Y ++ A ++ KA E F +
Sbjct: 581 YNALIHGLVRKHKVQRAVSVLDKM--SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK 638
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSND 177
+K+ G + + LL + + + A V M + + F Y ILID + D
Sbjct: 639 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 698
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + +++ MK +G+ P+ T G ++AE +++EM LK + T
Sbjct: 699 VWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTT 758
Query: 238 LLPLYAELGKADQVARIWK 256
L+ +A + D+ + ++
Sbjct: 759 LIKGWARVSLPDRALKCFE 777
>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 134/326 (41%), Gaps = 6/326 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-ME 154
Y + V + + AE ++ MK GF + F ++ + ++ K + D LL ME
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+++ + +D+ + N + Q M G EPD + IL G+
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD----QVARIWKLCESNPWLDVCMAA 270
A + M + C L+ K D VA K V A
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I + K ++E+AEA+ MSK + Y LL Y D+ ML + + ++ +M SG
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI 286
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ +++ L+K H +K + ++K + F + SY +++ + + +
Sbjct: 287 QLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVV-SYSTLIETFCRASNTRKAY 345
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYI 416
++F MRQ G V + +L++A++
Sbjct: 346 RLFEEMRQKGMVMNVVTYTSLIKAFL 371
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 141/343 (41%), Gaps = 8/343 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y L+ V A E++N M G + AC L++ K +A ++
Sbjct: 150 VSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAE 209
Query: 154 EKEN--VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
E ++ VKL+ Y LI ++ + + + M G EPD T +L +Y
Sbjct: 210 EIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNN 269
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCMAA 270
++AE ++ EM ++ ++ LL + + D+ K E + DV +
Sbjct: 270 MLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYS 329
Query: 271 --IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
IE + + + +A +F+ M + ++ YT+L+K + S K L+ QM E
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTEL 389
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + + ++ + G V+KA + +++ P SY ++ + G +
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGV-FNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRM 429
K+F M+ F+ ++ I K + AY + D+M
Sbjct: 449 AIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 94/255 (36%), Gaps = 22/255 (8%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
PD+ ++ L Y + N L RAE +A M +QL + Y
Sbjct: 253 PDLVTYNVLLNYYYDNNMLKRAEGVMA-------EMVRSGIQLDAY------------SY 293
Query: 64 ASCLDLIAKLRGLQKAESYIQKI--PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
L ++ K +++ K P F V Y TL+ +N +KA +F M+
Sbjct: 294 NQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQ 353
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTG 180
KG + L+ + R VA LL M + + + Y ++D +S ++
Sbjct: 354 KGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
V M I PD+ + L GR +A + ++M+G T + ++
Sbjct: 414 AYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIG 473
Query: 241 LYAELGKADQVARIW 255
K ++W
Sbjct: 474 GLIRGKKLSAAYKVW 488
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 148/327 (45%), Gaps = 11/327 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y +L N + + A +F+ M+ + + + L+ + K+ + D L
Sbjct: 162 YNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYF---GKEGMFDAALSWLQ 218
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME++ V Y LI++ + D + + +K GI PD + +
Sbjct: 219 KMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAK 278
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWLDV--CM 268
+A +LKEM ++ + LL ++ E K + ++ I ++ E N LD+ C
Sbjct: 279 LFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCN 338
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+L+ V+EA+ +F RM K + + Y +L+VY + ++ + L + M
Sbjct: 339 IMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 398
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ ++ ++K++ + E EKA + L++ Q+ +P +Y I+ + K G +
Sbjct: 399 EIKQNVVTYNTMIKIYGKTLEHEKATN-LVQDMQKRGIEPNAITYSTIISIWGKAGKLDR 457
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ +F ++R G +QT++ AY
Sbjct: 458 SAMLFQKLRSSGAEIDQVLYQTMIVAY 484
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 141/348 (40%), Gaps = 42/348 (12%)
Query: 69 LIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTS 128
L + R L K + +P++ V Y TLL V +A V + MK+ P+
Sbjct: 279 LFREARFLLKEMRAVDVMPDT----VSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDL 334
Query: 129 FACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
CN ++ +Y +LD K AD L M K ++ SY ++ + G++ +
Sbjct: 335 TTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRL 394
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M+ + I+ + T + K Y EKA ++++M+ ++ + T Y+ +
Sbjct: 395 MQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAIT-------YSTI-- 445
Query: 248 ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
I WGK K++ + +F+++ + ++ Y ++
Sbjct: 446 -----------------------ISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIV 482
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
Y ++ K L+ ++ + A L K G +E+A + +A + K
Sbjct: 483 AYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAK----AGRIEEATWVFRQAFDAGELK 538
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ S + ++D +++ + ++F +MR VG+ ++ AY
Sbjct: 539 DI-SVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAY 585
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/259 (17%), Positives = 119/259 (45%), Gaps = 7/259 (2%)
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI-EPDSSTQAILAKHYVSGGRKEKAEAML 220
+ S + ++ + + +D +++ + E + P ++ ++ + + E A +
Sbjct: 123 ELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLF 182
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQ-VARIWKLCESNPWLDVCMAA--IEAWGKL 277
EM L R+T L+ + + G D ++ + K+ + D+ + + IE KL
Sbjct: 183 DEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKL 242
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+A ++F R+ ++ Y ++ V+ K+ + + L+K+M +++
Sbjct: 243 CDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSY 302
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPM-FSSYMLIMDQYAKRGDIHSTEKIFHRM 396
L+ + VE + +A S++ + ++ N P+ ++ +++D Y + + +++F RM
Sbjct: 303 STLLNMFVENEKFLEALSVISEMKEVNC--PLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360
Query: 397 RQVGYVARFKQFQTLVQAY 415
R++G + T+++ Y
Sbjct: 361 RKIGIEPNVVSYNTILRVY 379
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 157/356 (44%), Gaps = 14/356 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y LL N + A +F+ M+ KG + + L+ + K + D L
Sbjct: 138 YNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITSF---GKHGLFDSSLFWLQ 194
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME++NV Y LID+ + +D + + +K+ I PD + +
Sbjct: 195 QMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGKAK 254
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWLDV--CM 268
+A +L+EM + ++ + LL +Y + K + ++ +++ E+ LD+ C
Sbjct: 255 LFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCN 314
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+L+ +EA+ +F M K + + Y LL+VY + + + L + M
Sbjct: 315 IMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSK 374
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ ++ ++ ++ + E EKA + L++ ++ +P +Y I+ + K G +
Sbjct: 375 DVQQNVVTYNTMINIYGKTLEHEKATN-LIQEMKKRGIEPNAITYSTIISIWEKAGKLDR 433
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKALA 441
+F ++R G +QT++ AY A A+ R + R DN+ + A+
Sbjct: 434 AAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIG 489
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/342 (18%), Positives = 142/342 (41%), Gaps = 40/342 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +++ K + ++A +Q++ ++ V Y TLLA V +A +F M
Sbjct: 243 YNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMN 302
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ P+ CN ++ +Y +L K AD L M K ++ SY L+ + G+++
Sbjct: 303 EAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFG 362
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+S+ ++ + T + Y EKA +++EM+ ++ + T ++
Sbjct: 363 EAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTII 422
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
+ W K K++ A +F+++ + ++
Sbjct: 423 SI--------------------------------WEKAGKLDRAAILFQKLRSSGVRIDE 450
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 451 VLYQTMIVAYERAGLVAHAKRLLHELKRPDN----IPRDTAIGILARAGRIEEATWVFRQ 506
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
A + K + S + +++ ++K + ++F +MR VGY
Sbjct: 507 AFDAREVKDI-SVFGCMINLFSKNKKYGNVVEVFEKMRVVGY 547
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 159/389 (40%), Gaps = 48/389 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDKKKVADVLLL 152
VY +++ N K VF R+K+ GF + S+ C LL LY ++ K VA L +
Sbjct: 410 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGC--LLNLYVKIGK--VAKALSI 465
Query: 153 ---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
ME +K +Y +LI+ +D + E M G++PD + +L + +
Sbjct: 466 SKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCK 525
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM- 268
G ++A +L++M+ + ++ R ++ YA G L + + M
Sbjct: 526 MGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMT 585
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A I + +KV+ A +V +MS + YT +++ YA + K + ++
Sbjct: 586 YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 645
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSI------------------------------ 356
ESG + ++ L++ + G ++ A ++
Sbjct: 646 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 705
Query: 357 ----LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L+K +++ P +Y ++ K GD+ EK+ M VG K + TL+
Sbjct: 706 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 765
Query: 413 QAYINAKTPAYGIR--DRMRADNVFPNKA 439
+ + P ++ + M+ + P++A
Sbjct: 766 KGWARVSLPDRALKCFEEMKLAGLKPDEA 794
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 135/318 (42%), Gaps = 14/318 (4%)
Query: 134 LLILY--KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+I+Y KR DK M ++ F + L+ + D+ G VE MKSE
Sbjct: 302 LMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE 361
Query: 192 GIEPDSSTQAILAKHYV------SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
G+E T +IL + G E+AE +++EME D + ++ Y +
Sbjct: 362 GLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTII 421
Query: 246 GKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
++ ++ K C P + + + K+ KV +A ++ K M K + K Y
Sbjct: 422 QNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTY 481
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
+ L+ + + + ++M SG ++ L++ + G +++A IL K Q+
Sbjct: 482 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 541
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--T 420
+ + +P ++ I++ YA GD+ S MR+ G V + L+ +
Sbjct: 542 E-RMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQ 600
Query: 421 PAYGIRDRMRADNVFPNK 438
A + D+M + PN+
Sbjct: 601 RAVSVLDKMSIAGITPNE 618
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 46/348 (13%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILI- 169
A F M+ +G +F L+ Y D + + M+ E ++LT +Y ILI
Sbjct: 316 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILIS 375
Query: 170 -----DIKGQSNDLTGMDQVVEAMKSEGIE------------------------------ 194
+ QS ++ +++V M+ +GI+
Sbjct: 376 GFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLK 435
Query: 195 -----PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-A 248
P + L YV G+ KA ++ KEME +K + T +L+ + L A
Sbjct: 436 ECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFA 495
Query: 249 DQVARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+ A ++ S P + IEA+ K+ ++ A + ++M K + S + + ++
Sbjct: 496 NAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPII 555
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
+ YA + D + M SGC + ++AL+ V +V++A S+L K
Sbjct: 556 EGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAG-I 614
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
P +Y +IM YA GDI + F ++++ G ++TL++A
Sbjct: 615 TPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 662
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 102/250 (40%), Gaps = 4/250 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLME 154
+R ++ ++K A + + M+ G T N L+ L ++ ++ VL M
Sbjct: 551 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 610
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + +Y I++ S D+ + +K G++ D L + GR +
Sbjct: 611 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQ 670
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAI 271
A A+ +EM + + + +L+ +A G +A+ + + K P + + I
Sbjct: 671 SALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYI 730
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
A K ++ AE V + M K + K YT L+K +A + + ++M +G
Sbjct: 731 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 790
Query: 332 IGPLAWDALV 341
++ LV
Sbjct: 791 PDEASYHCLV 800
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNR 118
Y + + + + +Q+A S + K+ S G E Y ++ A ++ KA E F +
Sbjct: 586 YNALIHGLVRKHKVQRAVSVLDKM--SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK 643
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSND 177
+K+ G + + LL + + + A V M + + F Y ILID + D
Sbjct: 644 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 703
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + +++ MK +G+ P+ T G ++AE +++EM LK + T
Sbjct: 704 VWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTT 763
Query: 238 LLPLYAELGKADQVARIWK 256
L+ +A + D+ + ++
Sbjct: 764 LIKGWARVSLPDRALKCFE 782
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 148/344 (43%), Gaps = 21/344 (6%)
Query: 90 FRGEVVYRTLLANCVAGNNV-------KKAEEVFNRMK---DKGFPVTSFACNQLLILYK 139
F E ++ L +C NN+ K+E V+ +K D+ FP+ CN ++L
Sbjct: 185 FMDECGFKASLFSC---NNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCN--IVLNS 239
Query: 140 RLDKKKVADVLLLMEK-ENVKLTQ-FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
+ K++ +++K +N +L +Y +++ + ++++ M+ GIE D
Sbjct: 240 LCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADL 299
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK- 256
T I+ R +A +LK M NL + L+ + GK + I+
Sbjct: 300 YTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQ 359
Query: 257 -LCES-NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
L +S P + A I+ + + + +EA V M T + S Y+ALL Y H
Sbjct: 360 MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSK 419
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
L DL+K + I + L+ + GEV KA I LK + P +Y
Sbjct: 420 LGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQI-LKCMLADGIDPDVITYS 478
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+++ K G IH T++I RM++ G + + TLV + A
Sbjct: 479 ALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKA 522
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 84/409 (20%), Positives = 162/409 (39%), Gaps = 43/409 (10%)
Query: 49 WLETNKKLDF-IERDYASC---LDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLANC 103
WL + LD D +C L+ + L KAES +QK+ V Y T+L
Sbjct: 215 WLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRLPNAVTYNTILNWY 274
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQ 162
V K A + + M+ G + N ++ +L + A +LL M + N+ +
Sbjct: 275 VKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDE 334
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
SY LI + + M + ++P +T L Y GR ++A +L E
Sbjct: 335 CSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYE 394
Query: 223 MEGDNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNK 279
M+ ++ T LL Y ++LG A + + + + + I+ + +L +
Sbjct: 395 MQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGE 454
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
V +A+ + K M Y+AL+ M+ + K+++ +M +SG + +
Sbjct: 455 VSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTT 514
Query: 340 LVKLHVEGGEVEK--------------ADSILLKA------------------QQQNKFK 367
LV + G ++ A+S++ A Q ++ K
Sbjct: 515 LVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMK 574
Query: 368 PMF--SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
F +S+ I+D Y +RG++ ++ M + G+ + +L++
Sbjct: 575 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG 623
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 160/393 (40%), Gaps = 13/393 (3%)
Query: 57 DFIERD---YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKK 111
D I+ D Y++ ++ + K+ + + + + ++ +S V+Y TL+ + K+
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 527
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVKLTQFSYKILID 170
A + F + G S N LL + R A+ M + + S+ +ID
Sbjct: 528 ALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIID 587
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
Q ++ V + M G PD T L + GG +A+ + +
Sbjct: 588 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAI 647
Query: 231 HRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAI--EAWGKLNKVEEAEAVF 287
T LL + G D+ + K+ N D I + + K KV A +
Sbjct: 648 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 707
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM-AESGCHIGPLAWDALVKLHVE 346
+ M + T YT LL + + + +++ + G + +A+++++ +++
Sbjct: 708 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 767
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
GG++ + + L++ +N+ P +SY ++M Y K+G + T ++ M + G
Sbjct: 768 GGQINEIER-LMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 826
Query: 407 QFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
++ L+ ++ ++M + VFP+
Sbjct: 827 TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPD 859
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/374 (18%), Positives = 144/374 (38%), Gaps = 41/374 (10%)
Query: 84 QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD 142
Q + +S + V Y L+ +A V M+ G + + LL Y +
Sbjct: 359 QMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHS 418
Query: 143 KKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
K A D++ + ++ + + Y ILID Q +++ Q+++ M ++GI+PD T +
Sbjct: 419 KLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYS 478
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR----IWK- 256
L G + + +L M+ + + L+ + + G A + + I++
Sbjct: 479 ALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRS 538
Query: 257 ------------LC---------ESNPW----------LDVCM--AAIEAWGKLNKVEEA 283
LC E+ + DV I+++ + V EA
Sbjct: 539 GLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEA 598
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+V+ M + Y +LL+ L + K+ + + E C I + L+
Sbjct: 599 FSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVG 658
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ G +++A + K +N P +Y +++D + KRG + + M + G V
Sbjct: 659 ICKHGTLDEALDLCEKMVTRNIL-PDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVP 717
Query: 404 RFKQFQTLVQAYIN 417
+ L+ +N
Sbjct: 718 DTIAYTCLLNGLVN 731
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 159/389 (40%), Gaps = 48/389 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDKKKVADVLLL 152
VY +++ N K VF R+K+ GF + S+ C LL LY ++ K VA L +
Sbjct: 384 VYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGC--LLNLYVKIGK--VAKALSI 439
Query: 153 ---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
ME +K +Y +LI+ +D + E M G++PD + +L + +
Sbjct: 440 SKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCK 499
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM- 268
G ++A +L++M+ + ++ R ++ YA G L + + M
Sbjct: 500 MGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMT 559
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A I + +KV+ A +V +MS + YT +++ YA + K + ++
Sbjct: 560 YNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIK 619
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSI------------------------------ 356
ESG + ++ L++ + G ++ A ++
Sbjct: 620 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVW 679
Query: 357 ----LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L+K +++ P +Y ++ K GD+ EK+ M VG K + TL+
Sbjct: 680 EAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLI 739
Query: 413 QAYINAKTPAYGIR--DRMRADNVFPNKA 439
+ + P ++ + M+ + P++A
Sbjct: 740 KGWARVSLPDRALKCFEEMKLAGLKPDEA 768
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 154/358 (43%), Gaps = 42/358 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIP---ESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
Y+ + AK+ Q A++ ++ S G + + A+C +GN +++AEE+ M
Sbjct: 315 YSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGN-MERAEELVREM 373
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
++ G + ++ Y +++ EN K L+
Sbjct: 374 EEDGIDAPIDVYHSMMHGYT------------IIQNEN--------KCLV---------- 403
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V E +K G +P + L YV G+ KA ++ KEME +K + T +L+
Sbjct: 404 ----VFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLI 459
Query: 240 PLYAELGK-ADQVARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ L A+ A ++ S P + IEA+ K+ ++ A + ++M K +
Sbjct: 460 NGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQ 519
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
S + + +++ YA + D + M SGC + ++AL+ V +V++A S+
Sbjct: 520 PSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSV 579
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L K P +Y +IM YA GDI + F ++++ G ++TL++A
Sbjct: 580 LDKMSIAG-ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRA 636
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 135/347 (38%), Gaps = 43/347 (12%)
Query: 134 LLILY--KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+I+Y KR DK M ++ F + L+ + D+ G VE MKSE
Sbjct: 247 LMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSE 306
Query: 192 GIEPDSSTQAILAKHY-----------------------------------VSGGRKEKA 216
G+E T +IL + G E+A
Sbjct: 307 GLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERA 366
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEA 273
E +++EME D + ++ Y + ++ ++ K C P + +
Sbjct: 367 EELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNL 426
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K+ KV +A ++ K M K + K Y+ L+ + + + ++M SG
Sbjct: 427 YVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPD 486
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++ L++ + G +++A IL K Q++ + +P ++ I++ YA GD+ S
Sbjct: 487 RAIYNLLIEAFCKMGNMDRAICILEKMQKE-RMQPSNRAFRPIIEGYAVAGDMKSALDTL 545
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNK 438
MR+ G V + L+ + A + D+M + PN+
Sbjct: 546 DLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNE 592
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 102/250 (40%), Gaps = 4/250 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLME 154
+R ++ ++K A + + M+ G T N L+ L ++ ++ VL M
Sbjct: 525 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 584
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + +Y I++ S D+ + +K G++ D L + GR +
Sbjct: 585 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQ 644
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAI 271
A A+ +EM + + + +L+ +A G +A+ + + K P + + I
Sbjct: 645 SALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYI 704
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
A K ++ AE V + M K + K YT L+K +A + + ++M +G
Sbjct: 705 NACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLK 764
Query: 332 IGPLAWDALV 341
++ LV
Sbjct: 765 PDEASYHCLV 774
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNR 118
Y + + + + +Q+A S + K+ S G E Y ++ A ++ KA E F +
Sbjct: 560 YNALIHGLVRKHKVQRAVSVLDKM--SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK 617
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSND 177
+K+ G + + LL + + + A V M + + F Y ILID + D
Sbjct: 618 IKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGD 677
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + +++ MK +G+ P+ T G ++AE +++EM LK + T
Sbjct: 678 VWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTT 737
Query: 238 LLPLYAELGKADQVARIWK 256
L+ +A + D+ + ++
Sbjct: 738 LIKGWARVSLPDRALKCFE 756
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 144/350 (41%), Gaps = 7/350 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A G + KA EV M G N +L Y ++ K A L
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L+D ++ T ++ ++M G+EPD +T L + Y + G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ A+L M + + +L+ YA+ K D+ ++ NP + A
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K V++A F++M + YT+L+ K ++L+ +M + G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D Y G +
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEK-LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEA 530
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
K+ M VG + TL+ Y ++ A + M + V PN
Sbjct: 531 TKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPN 580
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 145/339 (42%), Gaps = 47/339 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K + A Y Q I E + VY +L+ + + KAEE+ M
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEML 468
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 469 DRGICLNTIFFNSIIHSHCKEGRVIESEKLFD---LMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T L Y R + A A+ KEM + + T
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585
Query: 237 LLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
++L + ++ + +S L++ I G K N +EA +F+ + T
Sbjct: 586 IILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 645
Query: 294 WKKLSTKHYT----ALLKV---------------------YADHKMLSK---GKDLVKQ- 324
+L T+ + ALLKV Y ++++++ G+ L+++
Sbjct: 646 DLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705
Query: 325 ------MAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
M ++GC + + +V+ ++ GE+ +A + L
Sbjct: 706 DQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 136/305 (44%), Gaps = 12/305 (3%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL----DKKKVAD 148
+ Y T++ C G ++KKA ++F M+ +G N L+ + R D ++V
Sbjct: 270 ITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRV-- 327
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
M++ ++ F+Y LID + + ++ +M+ + I P+ T + + Y
Sbjct: 328 -FAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYG 386
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVC 267
G E+A + +M+ ++ R + L+ +YA+LG+ D K E DV
Sbjct: 387 KLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVV 446
Query: 268 M--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
A I+A+GK K ++A +F +M + Y+AL+ Y+ M + +
Sbjct: 447 TYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEF 506
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+G + + +L+ + G VE A +LL+ Q +P +Y ++D Y + G
Sbjct: 507 KRAGLKPDVVLYSSLIDSCCKCGLVEDA-VVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565
Query: 386 IHSTE 390
+ + E
Sbjct: 566 VDNVE 570
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 172/433 (39%), Gaps = 28/433 (6%)
Query: 1 MDAPDISIHST---LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLD 57
+ AP +S +ST L K++ + L + + L R + +ALQ EW+ L
Sbjct: 138 LSAPSMSGNSTALLLEKWSHQLVGLE--DFPYLLRELGNRGEWERALQGYEWMVQQGHLR 195
Query: 58 FIERDYASCL-DLIAKLRGLQKAESYIQKIPESFRGEVVY--RTLLANCVAGNNVKKAEE 114
AS + + +L ++ A + ++ G VY +++ ++A +
Sbjct: 196 SEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALK 255
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRL---------DKKKVADVLLLMEKENVKLTQFSY 165
VF MK G C LI Y + D KK D+ M+KE V+ + ++
Sbjct: 256 VFQAMKKAG-------CKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITF 308
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
LI + + + +V M+ GIE D T L GG+ E A +++ M
Sbjct: 309 NSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRL 368
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEE 282
N+ + T ++ Y +LG ++ ++ + ES D I+ + KL + ++
Sbjct: 369 KNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDD 428
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A K M + K Y AL+ Y L +M G L + AL+
Sbjct: 429 ALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALID 488
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+ + G + A SI ++ ++ KP Y ++D K G + + M Q G
Sbjct: 489 AYSKAGMHQDATSIFVEFKRAG-LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ 547
Query: 403 ARFKQFQTLVQAY 415
+ +L+ AY
Sbjct: 548 PNIVTYNSLIDAY 560
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 123/315 (39%), Gaps = 41/315 (13%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKI 167
V+ A +VFNR + GF +A + ++ Y R + ++ V M+K K +Y
Sbjct: 215 VEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNT 274
Query: 168 LIDIKGQSN-DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+ID G+ DL + E M+ EG+EPD T L G E ++ + EM+
Sbjct: 275 IIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRR 334
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEA 283
+++ +T L+ + G+ + A I +L +P + I+ +GKL EEA
Sbjct: 335 GIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEA 394
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
++ M ++ + Y L+ +YA K M G
Sbjct: 395 IGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGL------------- 441
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
KAD + +Y ++D Y K+G +F +M+ G V
Sbjct: 442 --------KADVV---------------TYNALIDAYGKQGKYKDAAGLFDKMKAEGLVP 478
Query: 404 RFKQFQTLVQAYINA 418
+ L+ AY A
Sbjct: 479 NVLTYSALIDAYSKA 493
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 124/324 (38%), Gaps = 43/324 (13%)
Query: 140 RLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSS 198
RL K ++A DV +K ++Y ++ G+S +V +AMK G +P+
Sbjct: 211 RLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLI 270
Query: 199 TQAILAKHYVSGGRK-EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
T + GG +KA + +EM+ + ++ R T L+ + + +W
Sbjct: 271 TYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSR-------GSLW-- 321
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
E+++ VF M + + Y L+ +
Sbjct: 322 -----------------------EDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMEL 358
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
++ M + + ++ + + G E+A L +++ +P SY ++
Sbjct: 359 AASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIG-LYHDMKESGVRPDRVSYNTLI 417
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY----GIRDRMRADN 433
D YAK G M +VG A + L+ AY K Y G+ D+M+A+
Sbjct: 418 DIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAY--GKQGKYKDAAGLFDKMKAEG 475
Query: 434 VFPNKALAAQVAQVDAFRKTAVSE 457
+ PN + A +DA+ K + +
Sbjct: 476 LVPN--VLTYSALIDAYSKAGMHQ 497
>gi|356510655|ref|XP_003524052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 712
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 119/272 (43%), Gaps = 3/272 (1%)
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
+ D+ M V L +Y +I + N E M G+ PD T + +
Sbjct: 208 IEDLAHQMIDNGVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEVTYSAILD 267
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NP 262
Y G+ E+ ++ + K T +L ++ E G D + +++ ES P
Sbjct: 268 VYARLGKVEEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQP 327
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
L V +EA GK K A +F+ M ++ + K TA++K+Y + +L
Sbjct: 328 NLVVYNTLLEAMGKAGKPGFARGLFEEMIESGIVPNEKTLTAVIKIYGKARWSRDALELW 387
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++M E+G + + ++ L+ + + G VE+A+++ +Q KP SY +++ Y
Sbjct: 388 QRMKENGWPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYGS 447
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+GD+ K+F M ++G F L+Q
Sbjct: 448 QGDVDKAMKLFDEMCKLGVELNVMGFTCLIQC 479
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 9/256 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y T+++ N KA F RM G + +L +Y RL KV +V+ L
Sbjct: 225 ITYSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLG--KVEEVISLY 282
Query: 154 EKENV---KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
E+ K ++ +L + G++ D G+ V + M+S G++P+ L +
Sbjct: 283 ERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKA 342
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM- 268
G+ A + +EM + + T ++ +Y + + +W+ + N W +D +
Sbjct: 343 GKPGFARGLFEEMIESGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILY 402
Query: 269 -AAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ + VEEAE +F+ M ++ K + YTA+L +Y + K L +M
Sbjct: 403 NTLLNMCADVGLVEEAETLFRDMKQSVHCKPDSWSYTAMLNIYGSQGDVDKAMKLFDEMC 462
Query: 327 ESGCHIGPLAWDALVK 342
+ G + + + L++
Sbjct: 463 KLGVELNVMGFTCLIQ 478
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/148 (18%), Positives = 64/148 (43%), Gaps = 3/148 (2%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y+ ++ + K ++M ++G + + A++ ++ G+VE+ S+ + +
Sbjct: 227 YSTIISCAKKCNLYDKAVHWFERMYKTGLMPDEVTYSAILDVYARLGKVEEVISLYERGR 286
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+KP ++ ++ + + GD +F M VG + TL++A A P
Sbjct: 287 ATG-WKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKAGKP 345
Query: 422 AY--GIRDRMRADNVFPNKALAAQVAQV 447
+ G+ + M + PN+ V ++
Sbjct: 346 GFARGLFEEMIESGIVPNEKTLTAVIKI 373
>gi|302798623|ref|XP_002981071.1| hypothetical protein SELMODRAFT_444771 [Selaginella moellendorffii]
gi|300151125|gb|EFJ17772.1| hypothetical protein SELMODRAFT_444771 [Selaginella moellendorffii]
Length = 470
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 184/426 (43%), Gaps = 45/426 (10%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIA 71
+ ++ GN L+R+ +A+ + +R RRM+ K++Q+ WL K ++ E DY + L
Sbjct: 61 IKQWERSGNKLTRSMLAMLLQRMRCRRMHTKSVQILSWLVEKKPIEVTEGDYEQLVTLAC 120
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
+ + AE Y +P + L+A + N + KAE N M+ P+
Sbjct: 121 RDSDYETAEKYFYSLPSHLSKWPAFSALVAGYASRNLMAKAE---NLMRTGTSPLPQPYS 177
Query: 132 NQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
+L+ +R + +K+ + M+ + ++ +Y +L+ K + + G++Q VE
Sbjct: 178 AMILMYIRRAEYQKIVKIYKSMKADGIEPNVITYAVLLKFKDRIGPIKGLEQDVE----- 232
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
D+ + L+ E A + G+ ++ YA LGK D+V
Sbjct: 233 ----DALGKIKLS---------EMCAAKRPAIAGN-----------MMHCYAMLGKLDKV 268
Query: 252 ARIWKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
+W+ + L + AIE+ L +V +AE V + K + + AL + +
Sbjct: 269 EEVWQQMDQERRLPEGFFVMAIESLALLGQVTKAEKVAQ--MKPTANVQARLLQALARHF 326
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS---ILLKAQQQNKF 366
A + + ++++ + ++ LV ++ + + A S + LK + +
Sbjct: 327 AKQGNMKRVEEMLGRADRYELTPSFGIYNYLVTGYLARKDPQTAASRMRLALKVVTEERA 386
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV-ARFKQFQTLVQAYINA-KTPAYG 424
P +++ ++ A D+ + E++ R R G+ F + L+ Y+ A K P+
Sbjct: 387 VPSYAAVTGLLPYLAAEKDVTTAEQMVRRYR--GWTDDNFHKL--LLNVYVEAGKGPSPD 442
Query: 425 IRDRMR 430
I+ R R
Sbjct: 443 IKSRFR 448
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 172/387 (44%), Gaps = 19/387 (4%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAES----YIQKIP-ESFRGEVVY 96
+A+ L EW+ +N ++ D + ++L+ ++ G + S + KIP + + +V
Sbjct: 176 RAILLFEWVVSNSVSGDVKLD-SKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRA 234
Query: 97 RTLLANCVAGNN-VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK--KVADVLLLM 153
T + + + N K+A +F RMKD G + N +L +Y ++ + K+ D+L M
Sbjct: 235 CTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEM 294
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E ++ +F+ +I G+ + + +KS G EP + T L + + G
Sbjct: 295 RNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIY 354
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAA 270
+A +LKEME +N T L+ Y G ++ A + P
Sbjct: 355 SEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTV 414
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE--- 327
I A+G+ K +A +F +M K+ + Y ++L + S+ ++++K +++
Sbjct: 415 INAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKK---SRSEEMIKILSDMRI 471
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+GC + W+ L+ + + G+ + + + + + F+P ++ ++ Y + G
Sbjct: 472 NGCPPNRITWNTLLAMCGDKGKHKFVNHV-FREMKNCGFEPGKDTFNTLISAYGRCGSEL 530
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
K++ M + G+ + L+ A
Sbjct: 531 DAAKMYDEMMKAGFTPCATTYNALLNA 557
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 135/289 (46%), Gaps = 9/289 (3%)
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+VKL + +++I I G+ + + ++++ + + D + Y G+ ++A
Sbjct: 192 DVKLDSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQA 251
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA-DQVARIW-KLCESNPWLD--VCMAAIE 272
AM + M+ L T ++L +Y ++G++ D++ + ++ D C I
Sbjct: 252 IAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVIS 311
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
A G+ + EA+ F + + + T Y ALL+V+ + S+ +++K+M ++ C +
Sbjct: 312 ACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTL 371
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ ++ LV +V G E+ ++ + + P +Y +++ Y + G ++
Sbjct: 372 DSVTYNELVAAYVRAGFYEEGATV-IDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQL 430
Query: 393 FHRMRQVGYVARFKQFQTLVQAYINAKTPA---YGIRDRMRADNVFPNK 438
F++M++ G V + +++ A + K+ + I MR + PN+
Sbjct: 431 FNQMKKSGCVPNVCTYNSIL-ALLGKKSRSEEMIKILSDMRINGCPPNR 478
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 123/306 (40%), Gaps = 5/306 (1%)
Query: 114 EVFNRMKDKGFPVTSFACNQLLILYKRLDKKK-VADVLLLMEKENVKLTQFSYKILIDIK 172
++ + M+ G P N LL + K K V V M+ + + ++ LI
Sbjct: 464 KILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAY 523
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
G+ ++ + M G P ++T L G + AE++L +M K +
Sbjct: 524 GRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNE 583
Query: 233 WTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
+ L+L YA+ G + RI K P + I A K V E F+
Sbjct: 584 TSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEE 643
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ K K + ++L ++A + M + + ++ + ESG + +++L+ ++ GE
Sbjct: 644 LMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGE 703
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
KA+ I LK ++ P SY I+ + ++G + ++ M G +
Sbjct: 704 CWKAEEI-LKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYN 762
Query: 410 TLVQAY 415
T V Y
Sbjct: 763 TFVSGY 768
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/299 (18%), Positives = 125/299 (41%), Gaps = 13/299 (4%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVL 150
G+ + TL++ + A ++++ M GF + N LL L +R D K VL
Sbjct: 512 GKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVL 571
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
L M + K + S+ +++ + ++ G++++ + + I P +L + +
Sbjct: 572 LDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFP----SWVLLRTLILA 627
Query: 211 GRKEKA----EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PW 263
K +A E +E+ + K +L ++A+ ++ ++ L + P
Sbjct: 628 NFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPD 687
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
L + + + + + +AE + K + K+ + Y ++K + ++ + ++
Sbjct: 688 LVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMS 747
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+M G ++ V + G + D ++ Q+N KP +Y +I+D Y K
Sbjct: 748 EMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKN-CKPNELTYKIIVDGYCK 805
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 144/350 (41%), Gaps = 7/350 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A G + KA EV M G N +L Y ++ K A L
Sbjct: 232 VTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L+D ++ T ++ ++M G+EPD +T L + Y + G
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ A+L M + + +L+ YA+ K D+ ++ NP + A
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K V++A F++M + YT+L+ K ++L+ +M + G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D Y G +
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEK-LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEA 530
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
K+ M VG + TL+ Y ++ A + M + V PN
Sbjct: 531 TKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPN 580
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 122/280 (43%), Gaps = 20/280 (7%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K + A Y Q I E + VY +L+ + + KAEE+ M
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEML 468
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 469 DRGICLNTIFFNSIIHSHCKEGRVIESEKLFD---LMVRIGVKPNVITYSTLIDGYCLAG 525
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T L Y R + A A+ KEM + + T
Sbjct: 526 KMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 585
Query: 237 LLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
++L + ++ + +S L++ I G K N +EA +F+ + T
Sbjct: 586 IILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 645
Query: 294 WKKLSTKHYT----ALLKVYADHKMLSKGKDLVKQMAESG 329
+L T+ + ALLKV + + KDL ++ +G
Sbjct: 646 DLQLETRTFNIMIGALLKVGRN----DEAKDLFAALSANG 681
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 145/330 (43%), Gaps = 16/330 (4%)
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENV-KLTQFSYKILIDIKGQS 175
R+K G P L+ +K+L K V+++L ++ ++ + + +LI G+
Sbjct: 72 RIKKDGLPRDLVLGT--LVRFKQLKKWDLVSEILEWLQSQHWWDFNEMDFLMLITAYGKL 129
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
D G + V+ +M G P+ + L + Y GGR AEA+ + M+ + T
Sbjct: 130 GDFNGAEMVLRSMNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTY 189
Query: 236 RLLLPLYAELGKADQVARIWK--LCESNPWLD----VCMAAIEAWGKLNKVEEAEAVFKR 289
+++L + E K + +++ L + N L+ + I K E+A VF
Sbjct: 190 QIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFAL 249
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
M++ ST Y +L+ ++K +SK D QM SG +++ L+K +
Sbjct: 250 MAERGVPQSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLRPDVVSYALLIKAYGRARR 306
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
E+A ++ + +P +Y +++D +A G + +F MR+ +
Sbjct: 307 EEEALAV-FEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYT 365
Query: 410 TLVQAYINAK--TPAYGIRDRMRADNVFPN 437
T++ AY+NA A R+R D + PN
Sbjct: 366 TMLSAYVNASDMEGAENFFKRLRQDGLKPN 395
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 40/311 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDK-GFPVTSFACNQLLILY---KRLDKKKVADV 149
+ Y+ +L V GN K+AEEVF + +K P+ +++Y K + +K V
Sbjct: 187 LTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKV 246
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
LM + V + +Y L+ + +++ ++ + M+ G+ PD + A+L K Y
Sbjct: 247 FALMAERGVPQSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLRPDVVSYALLIKAYGR 303
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
R+E+A A+ +EM ++ +LL +A G
Sbjct: 304 ARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGM---------------------- 341
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
VE+A VFK M + YT +L Y + + ++ K++ + G
Sbjct: 342 ----------VEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGAENFFKRLRQDG 391
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + AL+K H + +EK I + Q N K + IMD Y K D S
Sbjct: 392 LKPNVVTYGALIKGHAKVNNLEKMMEI-YEEMQLNSIKANQTILTTIMDAYGKNKDFGSA 450
Query: 390 EKIFHRMRQVG 400
+ M G
Sbjct: 451 VIWYKEMEHHG 461
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 149/382 (39%), Gaps = 52/382 (13%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLANC 103
++ EWL++ DF E D+ + KL AE ++ + + VV T L
Sbjct: 101 EILEWLQSQHWWDFNEMDFLMLITAYGKLGDFNGAEMVLRSMNGNGYVPNVVSHTALMEA 160
Query: 104 VA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ 162
G AE +F RM+ G P S
Sbjct: 161 YGRGGRYNNAEAIFRRMQTSG-PEPS---------------------------------A 186
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAM---KSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
+Y+I++ + N ++V E + ++ +EPD ++ G EKA +
Sbjct: 187 LTYQIILKTFVEGNKFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKV 246
Query: 220 LKEMEGDNLKEHRWTCRLLLPL---YAELGKA-DQVARIWKLCESNPWLDVCMAA--IEA 273
M + + T L+ Y E+ K DQ+ R S DV A I+A
Sbjct: 247 FALMAERGVPQSTVTYNSLMSFETNYKEVSKIYDQMQR------SGLRPDVVSYALLIKA 300
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ + EEA AVF+ M + S K Y LL +A M+ + + + K M C
Sbjct: 301 YGRARREEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPD 360
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++ ++ +V ++E A++ K +Q+ KP +Y ++ +AK ++ +I+
Sbjct: 361 LCSYTTMLSAYVNASDMEGAEN-FFKRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIY 419
Query: 394 HRMRQVGYVARFKQFQTLVQAY 415
M+ A T++ AY
Sbjct: 420 EEMQLNSIKANQTILTTIMDAY 441
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDK 143
+P+S V Y +L++ N K+ +++++M+ G V S+A L+ Y R +
Sbjct: 255 VPQS---TVTYNSLMS---FETNYKEVSKIYDQMQRSGLRPDVVSYAL--LIKAYGRARR 306
Query: 144 KKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
++ A V M V+ + +Y IL+D S + V ++M+ + PD +
Sbjct: 307 EEEALAVFEEMLDAGVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTT 366
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
+ YV+ E AE K + D LK + T L+ +A++ +++ I++ + N
Sbjct: 367 MLSAYVNASDMEGAENFFKRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNS 426
Query: 263 W---LDVCMAAIEAWGKLNKVEEAEAVFKRM 290
+ ++A+GK A +K M
Sbjct: 427 IKANQTILTTIMDAYGKNKDFGSAVIWYKEM 457
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 6/276 (2%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y L+ + L +QV++ M G+ PD +T ++L Y GR E A +LKEM
Sbjct: 161 AYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 220
Query: 224 EGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
E D +K + +L + + G KA V R P I+ +GK N +
Sbjct: 221 EADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCL 280
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
A F RM + + + L+ + + +L +M ES C +G ++ +
Sbjct: 281 GHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIM 340
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ L E E +++L + ++Q P +Y ++D Y + G M+ G
Sbjct: 341 INLLGEEQRWEGVEAMLAEMKEQG-LVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADG 399
Query: 401 YVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNV 434
+ LV AY A + MRAD +
Sbjct: 400 LKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGL 435
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 144/346 (41%), Gaps = 7/346 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L K+ L+ AE + ++ + E Y L+ + A +
Sbjct: 160 RAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 219
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G +S+ +++L ++ R + +K VL M V+ + Y ++ID G+ N
Sbjct: 220 MEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNC 279
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L + M+ EGIEPD T L + GGR ++A + EM N T +
Sbjct: 280 LGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNI 339
Query: 238 LLPLYAELGKADQV-ARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ L E + + V A + ++ E P + ++ +G+ + +EA + M
Sbjct: 340 MINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADG 399
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S+ Y AL+ YA + ++VK M G + ++L+ E + +A
Sbjct: 400 LKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAF 459
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
S+ L+ ++N +P +Y +M + I+ M G
Sbjct: 460 SV-LQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSG 504
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSY 165
N + A + F+RM+++G N L+ + + + + ++ M + N L +Y
Sbjct: 278 NCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTY 337
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 338 NIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKA 397
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEE 282
D LK L+ YA+ G AD + K ++ V + I A+G+ ++ E
Sbjct: 398 DGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAE 457
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A +V + M + + YT L+K + K + ++M SGC
Sbjct: 458 AFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGC 505
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 8/254 (3%)
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
I+P + L K YV G + AE +L EM + T LL+ Y G+ +
Sbjct: 155 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 214
Query: 253 RIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
+ K E++ P V + + + ++A AV + M + + Y ++ +
Sbjct: 215 ILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 274
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM 369
+ L D +M E G + W+ L+ H +GG ++A + + ++ N P+
Sbjct: 275 GKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN--CPL 332
Query: 370 -FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIR 426
++Y ++++ + E + M++ G V + TLV Y + A
Sbjct: 333 GTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCI 392
Query: 427 DRMRADNVFPNKAL 440
+ M+AD + P+ +
Sbjct: 393 EAMKADGLKPSSTM 406
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 8/182 (4%)
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGK 319
P + A I + G +V EAEA+F + K T+ Y ALLK Y L +
Sbjct: 120 TPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAE 179
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML--IM 377
++ +M++ G + LV + G E A ILLK + + KP SSY+ I+
Sbjct: 180 QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA-RILLKEMEADGVKP--SSYVFSRIL 236
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVF 435
+ RG+ + M G + ++ + N A DRMR + +
Sbjct: 237 AGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIE 296
Query: 436 PN 437
P+
Sbjct: 297 PD 298
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 4/181 (2%)
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
VC + A G ++ E +++ ++ + ++ L+ +A ++ +L+
Sbjct: 57 VCFGVVAARGVIDC--EVPSMYCGGGESRLEPDAPLFSDLISAFARARLPDAALELLASA 114
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
G A AL+ V +A+++ L+ + KP +Y ++ Y K G
Sbjct: 115 QAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGS 174
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQ 443
+ + E++ M Q G + LV AY A A + M AD V P+ + ++
Sbjct: 175 LKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSR 234
Query: 444 V 444
+
Sbjct: 235 I 235
>gi|413950397|gb|AFW83046.1| hypothetical protein ZEAMMB73_939845 [Zea mays]
Length = 453
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 138/341 (40%), Gaps = 39/341 (11%)
Query: 24 RAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYI 83
RA++ RR Y +AL++ W+E+ L D+A+ LDLIAK +AE Y
Sbjct: 109 RADVPSFHTKFSERR-YEQALEIFSWMESCSSLRLSSWDHAARLDLIAKAYSTSQAEEYY 167
Query: 84 QKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK 143
K+ + FP+ L D
Sbjct: 168 NKLQSPATRQAA---------------------------SFPL-------LHCYVMERDH 193
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM-KSEGIEPDSSTQAI 202
+KV V+ LM++ N+ SY + ++ + + + + V + M E ++ ST
Sbjct: 194 EKVLSVIDLMKRNNIHRNVLSYNLWMNACAEVSGVDSVQSVFQVMLNDETVKVGWSTYCT 253
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
LA + G +A+A L + E R ++ YA L +D V R+W+ +S P
Sbjct: 254 LANIFRKNGLNTEAQACLVKAEAKLSPTGRLGYSFVMTCYAALNDSDGVMRMWEASKSVP 313
Query: 263 WLDVC---MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
+ MAA+ K+ + +AE +F + +K + LL Y ++ + K +
Sbjct: 314 GRILTAYYMAAMSCSIKVGDISQAECIFGKWEAGCRKHDVRVSNVLLGAYVRNRWIEKAE 373
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
L M E G W+ L++ +V+ +++KA + K
Sbjct: 374 RLHLHMLEKGACPNYKTWEILMEGYVQSRQMDKAVGCMKKG 414
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 157/358 (43%), Gaps = 18/358 (5%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y LL N + A +F+ M+ KG + + L+ + K + D L
Sbjct: 147 YNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTLITCF---GKHGLFDSSLFWLQ 203
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME++NV Y LID+ + +D + + +K+ I PD + +
Sbjct: 204 QMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAK 263
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWLDV--CM 268
+A +L+EM + ++ + LL +Y + K + ++ ++ E+ LD+ C
Sbjct: 264 LFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCN 323
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+L+ +EA+ +F M K + + Y LL+VY + + + L + M
Sbjct: 324 IMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSK 383
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK--FKPMFSSYMLIMDQYAKRGDI 386
+ ++ ++ ++ + E EKA +++ Q+ NK +P +Y I+ + K G +
Sbjct: 384 DVQQNVVTYNTMINIYGKTLEHEKATNLI---QEMNKRGIEPNAITYSTIISIWEKAGKL 440
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKALA 441
+F ++R G +QT++ AY A+ R + R DN+ + A+A
Sbjct: 441 DRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIA 498
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/342 (19%), Positives = 144/342 (42%), Gaps = 40/342 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +++ K + ++A +Q++ ++ V Y TLLA V +A +F+ M
Sbjct: 252 YNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMN 311
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ P+ CN ++ +Y +L K AD L M K ++ SY L+ + G+++
Sbjct: 312 EAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFG 371
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+S+ ++ + T + Y EKA +++EM ++ + T
Sbjct: 372 EAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAIT----- 426
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
Y+ + I W K K++ A +F+++ + ++
Sbjct: 427 --YSTI-------------------------ISIWEKAGKLDRAAILFQKLRSSGVRIDE 459
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 460 VLYQTMIVAYERTGLVAHAKRLLHELKRPD----NIPRDTAIAILARAGRIEEATWVFRQ 515
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
A + K + S + +++ ++K + ++F +MR+VGY
Sbjct: 516 AFDAREVKDI-SVFGCMINLFSKNKKYANVVEVFEKMREVGY 556
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 153/383 (39%), Gaps = 25/383 (6%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTL 99
+ A +L E +E N L E YA D + K ++A S+I + + +V Y TL
Sbjct: 548 FDNAFRLFEMMEQNG-LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALT-KVYYTTL 605
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENV 158
+ N A + RM D+G S+ + LL L K+ + +L M +
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K T F+Y ILID + ++ M S G +P ++T + Y GR E AE
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCMA---- 269
++ +ME + + T +L+ +G D+ K CE N W C+
Sbjct: 726 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW-TYCLLLKHL 784
Query: 270 ---------AIEAWGKLNKVEE--AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
+++ G N +E + +RM K + Y++L+ + L +
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
L+ M G + L+K + EKA S + + F+P SY L++
Sbjct: 845 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS-FVSIMSECGFQPQLESYRLLVV 903
Query: 379 QYAKRGDIHSTEKIFHRMRQVGY 401
GD + +F + ++GY
Sbjct: 904 GLCNEGDFEKVKSLFCDLLELGY 926
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 135/353 (38%), Gaps = 14/353 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y T++ + ++ A F + + G +F CN L++ Y R + +K + L+
Sbjct: 184 VTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLM 243
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + ++SY ILI + + + MK +G P+ L GR
Sbjct: 244 MPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR 303
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
A + M + + T ++ Y++LG+ + +I +L E N C
Sbjct: 304 VGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG----CHPDDW 359
Query: 273 AWGKL------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ L K EEAE + K + +T L+ Y + + +M
Sbjct: 360 TYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 419
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
S C + + L+ ++ +++A LL N P +Y I+D Y K G +
Sbjct: 420 SSKCKLDLQVFGKLINSLIKKDRLKEAKE-LLNEISANGLVPNVITYTSIIDGYCKSGKV 478
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
++ M + G + +L+ + K A + +M+ D + PN
Sbjct: 479 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/349 (18%), Positives = 128/349 (36%), Gaps = 43/349 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+ Y +++ V A EV M+ G ++ N L+ Y + KK+ + L
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM--YGLVKDKKLHKAMALL 520
Query: 153 --MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+K+ + +Y L+ + +D ++ E M+ G++PD A+L
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
GR E+A + + +G L + +T
Sbjct: 581 GRAEEAYSFIVR-KGVALTKVYYT----------------------------------TL 605
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+ + K + A + +RM + Y+ LL K L++ ++ QM+ G
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
A+ L+ + G+ + A + + KP ++Y + ++ Y K G + E
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKR-MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 391 KIFHRMRQVGYVARFKQFQTLVQ--AYINAKTPAYGIRDRMRADNVFPN 437
+ +M + G + L+ ++ A+ RM + PN
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 147/395 (37%), Gaps = 36/395 (9%)
Query: 56 LDFIERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVA 105
L +ERD Y S + + K + L KA + + K+ + + Y TLL
Sbjct: 485 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 544
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFS 164
++ A +F M+ G A +L L K + + + ++ V LT+
Sbjct: 545 EHDFDNAFRLFEMMEQNGLKPDEHA---YAVLTDALCKAGRAEEAYSFIVRKGVALTKVY 601
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LID ++ + ++E M EG PDS T ++L R +A +L +M
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVE 281
+K + +L+ GK D R++ S+ P I ++ K ++E
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+AE + +M + Y L+ + + +K+M + C P W +
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCE--PNYWTYCL 779
Query: 342 KL-HVEGGEVEKADSI----------------LLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
L H+ G + S+ LL+ ++ P ++Y ++ + K G
Sbjct: 780 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 839
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + M G + L++ + K
Sbjct: 840 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTK 874
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 133/341 (39%), Gaps = 24/341 (7%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP--VTSFACNQLLILYKRLDKKKVAD 148
R E Y L+ V+KA +F MK G V +F ++ +V D
Sbjct: 251 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFT----FLISGLCKSGRVGD 306
Query: 149 VLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
LL M + V + +Y +I + + ++ E M+ G PD T L
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI- 365
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWL 264
+ + + E+AE +L + T L+ Y K D R+ K+ S L
Sbjct: 366 YGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425
Query: 265 DVCMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
D ++ +GKL ++++EA+ + +S + YT+++ Y +
Sbjct: 426 D-----LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 480
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+++K M GC +++L+ V+ ++ KA ++L K Q++ P +Y ++
Sbjct: 481 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK-MQKDGIIPNVITYTTLL 539
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
D + ++F M Q G + L A A
Sbjct: 540 QGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
>gi|302764530|ref|XP_002965686.1| hypothetical protein SELMODRAFT_407278 [Selaginella moellendorffii]
gi|300166500|gb|EFJ33106.1| hypothetical protein SELMODRAFT_407278 [Selaginella moellendorffii]
Length = 1015
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 187/450 (41%), Gaps = 65/450 (14%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ PDI L ++ EGN S + ++ L R+ Y + LQL + + +
Sbjct: 576 LSKPDI--FQGLKEWVREGNTFSSSLLSKVYYRLAKRKCYKEILQLLRGIREENMVQTTQ 633
Query: 61 RDYASCLDLIAKLRGLQKAESYIQK-IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
Y + + + + AE + IP FR E V L+ + N + K+E+ +M
Sbjct: 634 THYIWEMAITCRQQSTYAAEIFYNDIIPARFRSEEVTAALIFSLAKRNALAKSEKWIEQM 693
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+++ N L+ LY LD+ K VL
Sbjct: 694 T----VLSTDLLNMLMALY--LDRDKHDKVL----------------------------- 718
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILA--KHYVSGGR---KEKAEAMLKEMEGDNLKEHRWT 234
+ E M G+EP +T +L K GG + +AE +K+++ D R T
Sbjct: 719 ---ETYERMSKLGLEPSINTYLMLLTYKDKAGGGLEGIEREAEEAVKKIDLD--AALRKT 773
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVC-----MAAIEAWGKLNKVEEAEAVFKR 289
+ + + LGKA V IW +S C ++A+ A+G++ VE AE VF+
Sbjct: 774 LQETMEVCGYLGKAASVEDIWSRLKSLSGTQACDQSSYLSAMAAFGRVKNVERAEQVFEE 833
Query: 290 M--SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ K L+ H +++VY + +++K + +++ P +++LV+ ++
Sbjct: 834 LLTQDLSKSLANPH-AVMVEVYVSNGLMAKAEHVLRHRLNEAV-FSP--YNSLVRGYIAS 889
Query: 348 GEVEKADSIL---LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
G+ E A + L + A +P + + M ++ +A R DI E+I R +G
Sbjct: 890 GDTELALARLKEGVAAIPARHIRPAYKTMMALLPVFAARRDIDGAERIMFHYRFIGDATV 949
Query: 405 FKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
+ + L++ Y+ R+RM+ +V
Sbjct: 950 YNE---LLKVYVACNVFPLDFRNRMKGSDV 976
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/453 (19%), Positives = 189/453 (41%), Gaps = 67/453 (14%)
Query: 14 KYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKL 73
K+ GN LS ++ L R+ Y + ++L E + + + F + + +I++
Sbjct: 92 KWMRRGNCLSSDVLSTIYFWLMKRKRYTEIMKLLEGIRCERLVKFTDMHCVWAIGVISRR 151
Query: 74 RGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
RG+ KAE + +PE R + V L + N + KAE+ +++ T+ +
Sbjct: 152 RGMAKAERFYDSLPEKLRTDRVTVGLFLSVAKENGLAKAEQWLEKIQVH----TTDILDV 207
Query: 134 LLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
+++LY DK +K++ ++ E M+ G+
Sbjct: 208 MMVLYLNRDKH--------------------HKVV--------------EMFERMRGLGL 233
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW---------TCRLLLPLYAE 244
+P T +L K K++ L +EG+ L + T + +Y
Sbjct: 234 QPSVRTYLMLLKC------KDRGAGGLNAIEGEALGAVQTIDVEDSPVRTLNDAMEVYGY 287
Query: 245 LGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM---SKTWKKLS 298
+GK + +W K S+ +AI A G + +V +A A+ K + S + K
Sbjct: 288 VGKQHGIEELWRSLKRTRSDIHQSSYFSAITALGLVGEVAKARALCKELLAGSDEFTKFE 347
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL- 357
+ +L+VYA + M+ K + +++ P +++L++ ++ + +A L
Sbjct: 348 QNPHALMLEVYARNGMMEKAERILQSKELDRDSFAP--YNSLIQGYMAANNISEALKKLD 405
Query: 358 --LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L A + + + M+++ YA GD+ +++ R ++G + +F ++ Y
Sbjct: 406 DGLAAVPAKSIRLQYKTMMVLLPVYAANGDVEGAKELMRRYTKLGDAGVYNEF---LKVY 462
Query: 416 INAKTPAYGIRDRMRADNVFPNKALAAQVAQVD 448
I+ K +RM+A+ V N+ + ++D
Sbjct: 463 ISRKRHPREFMERMQANGVEGNRETEKLLEELD 495
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 137/299 (45%), Gaps = 13/299 (4%)
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--ILYKRLDKKKVADVLLLMEKE 156
L A C AG+ + +AE V + M++ G P + N L +L R +K V +V M++E
Sbjct: 19 LRAYCNAGS-LHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAV-EVYQRMKRE 76
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+ ++ ++I++ G++ +V MKS G +P+ T L + G EKA
Sbjct: 77 RCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKA 136
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAI 271
E + +EM+ + + L+ Y+ G + I+ L CE P +
Sbjct: 137 EEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCE--PDRASYNILV 194
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+A+G+ E+AEAVF+ + + + K + LL +A ++ ++++ Q+ +SG
Sbjct: 195 DAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLT 254
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
A +A++ + G ++ + + A + + +Y + ++ Y + G + E
Sbjct: 255 PDTFALNAMLNAYARAGRLDDMERLF--AAMERRGDADVGTYNVAVNAYGRAGYVGRME 311
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 8/274 (2%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEK 155
T L N A + +KAEEVF M+ G +A N L+ Y R + +++ LM+
Sbjct: 121 TALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQH 180
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ + SY IL+D G++ + V E +K G+ P + +L + G +
Sbjct: 181 MGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATR 240
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM--AAIEA 273
E ++ ++ L + +L YA G+ D + R++ E DV A+ A
Sbjct: 241 CEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDADVGTYNVAVNA 300
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+G+ V EA F ++ +TA + YA K + +V++M ++GC+
Sbjct: 301 YGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCY-- 358
Query: 334 PLAWDALVKLHVEGGE--VEKADSILLKAQQQNK 365
P A A V L E VE+ +I+ ++ K
Sbjct: 359 PDAGTARVLLAACSDERQVEQVTAIVRSMHKKPK 392
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 82/227 (36%), Gaps = 68/227 (29%)
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
P T A+L + Y + G +AE ++ EM +EH +P A +
Sbjct: 10 PTEDTYALLLRAYCNAGSLHRAEGVISEM-----REHG------IPPNATV--------- 49
Query: 255 WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
N +LD + K E+A V++RM + + +T+ +T ++ VY K
Sbjct: 50 -----YNAYLDGLL-------KARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQ 97
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
+ +M GC KP +Y
Sbjct: 98 PMSSMKVFNEMKSIGC------------------------------------KPNICTYT 121
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+++ +A+ G E++F M+Q G+ + L++AY A P
Sbjct: 122 ALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLP 168
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 163/385 (42%), Gaps = 13/385 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
+ ++ KL+ QKAES + + + + V+ L+ A ++A +FN M
Sbjct: 750 HTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMM 809
Query: 121 DKGFPVTSFACN---QLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
G T + N Q LI+ RLD+ V V+ ++ K+++ S +++D + +
Sbjct: 810 RDGPSPTVDSVNGLMQALIVDGRLDELYV--VIQELQDMGFKISKSSITLMLDAFAHAGN 867
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + ++ + MK+ G P I+ G R EAM+ EME K
Sbjct: 868 IFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNS 927
Query: 238 LLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+L LY +G + ++++L + P D I + + + EE ++ M +
Sbjct: 928 VLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVG 987
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y +L+ + +M+ + ++L + + C + + ++K+ G KA+
Sbjct: 988 LEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAE 1047
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
LL ++ +P ++ L+M Y+ G EK+ ++ G + +++ A
Sbjct: 1048 K-LLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDA 1106
Query: 415 YINAKTPAYGIRD--RMRADNVFPN 437
Y+ I+ M+ D + P+
Sbjct: 1107 YLKNGDHNVAIQKLMEMKKDGLEPD 1131
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 124/307 (40%), Gaps = 47/307 (15%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y TL++ C +N+++A +V+N M + C L
Sbjct: 295 ITYNTLISACSRESNLEEAVKVYNDM-------VAHRCQPDL------------------ 329
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
++Y +I + G+ ++ + ++S+G PD+ T L + G
Sbjct: 330 ---------WTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNV 380
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAA 270
+K + + ++M + T ++ +Y + G+ D +++ KL +P
Sbjct: 381 DKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVL 440
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I++ GK N ++EA V M K + + ++AL+ YA + ++ M SG
Sbjct: 441 IDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGI 500
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ---NKFKPMFSSYMLIMDQYAKRG--- 384
LA+ ++ + + E KA +K Q+ + FKP + Y +++ K
Sbjct: 501 KPDHLAYSVMLDILLRFNESGKA----MKLYQEMVLHSFKPDHALYEVMLRVLGKENREE 556
Query: 385 DIHSTEK 391
D+H K
Sbjct: 557 DVHKVVK 563
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 125/310 (40%), Gaps = 10/310 (3%)
Query: 98 TLLANCVAGNNVKKAEEVFNRMKD-KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEK 155
T+L+ N A E+F R + G V + N ++ +Y R + KV ++L LM
Sbjct: 193 TILSVLGKANQEALAVEIFARAEAASGNTVQVY--NAMMGVYARTGRFTKVQELLDLMRS 250
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTG--MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ S+ LI+ + +S + +++ ++ GI+PD T L
Sbjct: 251 RGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNL 310
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AA 270
E+A + +M + WT ++ +Y G + + R++K ES +L + +
Sbjct: 311 EEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSL 370
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ A+ + V++ + + + M K Y ++ +Y L M SG
Sbjct: 371 LYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGR 430
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + L+ + +++A + + + KP ++ ++ YAK G E
Sbjct: 431 SPDAVTYTVLIDSLGKANMIKEAAEV-MSEMLNARVKPTLRTFSALICGYAKAGKRVEAE 489
Query: 391 KIFHRMRQVG 400
+ F M + G
Sbjct: 490 ETFDCMLRSG 499
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 8/243 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V Y +LL NV K +E+ M GF N ++ +Y + + +A L
Sbjct: 365 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSD 424
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ +Y +LID G++N + +V+ M + ++P T + L Y G+
Sbjct: 425 MKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGK 484
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPL---YAELGKADQVARIWKLCESNPWLDVCMA 269
+ +AE M +K ++L + + E GKA ++ + L P +
Sbjct: 485 RVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEV 544
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ GK N+ E+ V K M ++L + + + + ++++ G
Sbjct: 545 MLRVLGKENREEDVHKVVKDM----EELCGMNSQVICSILVKGECFDHAANMLRLAISQG 600
Query: 330 CHI 332
C +
Sbjct: 601 CEL 603
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/334 (16%), Positives = 126/334 (37%), Gaps = 35/334 (10%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+Y +LL C +A ++F+ M+ G + +++ Y ++ + A L+
Sbjct: 677 TMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQ 736
Query: 153 MEKENVKLTQFS-YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
E++ + S + +I+ G+ + +V +++ + D L Y + G
Sbjct: 737 AEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASG 796
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
E+A A+ M D +P +D +
Sbjct: 797 CYERARAIFNTMMRDG--------------------------------PSPTVDSVNGLM 824
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+A +++E V + + K+S T +L +A + + K + + M +G
Sbjct: 825 QALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYF 884
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ ++ L +G V ++ ++ + +FKP S + ++ Y GD T +
Sbjct: 885 PTMHLYRIMIGLLAKGKRVRDVEA-MVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQ 943
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
++ +++ G + TL+ Y + P G+
Sbjct: 944 VYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGL 977
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 153/383 (39%), Gaps = 25/383 (6%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTL 99
+ A +L E +E N L E YA D + K ++A S+I + + +V Y TL
Sbjct: 548 FDNAFRLFEMMEQNG-LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALT-KVYYTTL 605
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENV 158
+ N A + RM D+G S+ + LL L K+ + +L M +
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K T F+Y ILID + ++ M S G +P ++T + Y GR E AE
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCMA---- 269
++ +ME + + T +L+ +G D+ K CE N W C+
Sbjct: 726 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW-TYCLLLKHL 784
Query: 270 ---------AIEAWGKLNKVEE--AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
+++ G N +E + +RM K + Y++L+ + L +
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
L+ M G + L+K + EKA S + + F+P SY L++
Sbjct: 845 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS-FVSIMSECGFQPQLESYRLLVV 903
Query: 379 QYAKRGDIHSTEKIFHRMRQVGY 401
GD + +F + ++GY
Sbjct: 904 GLCNEGDFEKVKSLFCDLLELGY 926
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 136/353 (38%), Gaps = 14/353 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y T++ + ++ A F + + G +F CN L++ Y R + +K + L+
Sbjct: 184 VTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLM 243
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + ++SY ILI ++ + + MK +G P+ L GR
Sbjct: 244 MPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR 303
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
A + M + + T ++ Y++LG+ + +I +L E N C
Sbjct: 304 VGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG----CHPDDW 359
Query: 273 AWGKL------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ L K EEAE + K + +T L+ Y + + +M
Sbjct: 360 TYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 419
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
S C + + L+ ++ +++A LL N P +Y I+D Y K G +
Sbjct: 420 SSKCKLDLQVFGKLINSLIKKDRLKEAKE-LLNEISANGLVPNVITYTSIIDGYCKSGKV 478
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
++ M + G + +L+ + K A + +M+ D + PN
Sbjct: 479 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/349 (18%), Positives = 128/349 (36%), Gaps = 43/349 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+ Y +++ V A EV M+ G ++ N L+ Y + KK+ + L
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM--YGLVKDKKLHKAMALL 520
Query: 153 --MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+K+ + +Y L+ + +D ++ E M+ G++PD A+L
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
GR E+A + + +G L + +T
Sbjct: 581 GRAEEAYSFIVR-KGVALTKVYYT----------------------------------TL 605
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+ + K + A + +RM + Y+ LL K L++ ++ QM+ G
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
A+ L+ + G+ + A + + KP ++Y + ++ Y K G + E
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKR-MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 391 KIFHRMRQVGYVARFKQFQTLVQ--AYINAKTPAYGIRDRMRADNVFPN 437
+ +M + G + L+ ++ A+ RM + PN
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 773
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 147/395 (37%), Gaps = 36/395 (9%)
Query: 56 LDFIERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVA 105
L +ERD Y S + + K + L KA + + K+ + + Y TLL
Sbjct: 485 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 544
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFS 164
++ A +F M+ G A +L L K + + + ++ V LT+
Sbjct: 545 EHDFDNAFRLFEMMEQNGLKPDEHA---YAVLTDALCKAGRAEEAYSFIVRKGVALTKVY 601
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LID ++ + ++E M EG PDS T ++L R +A +L +M
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 661
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVE 281
+K + +L+ GK D R++ S+ P I ++ K ++E
Sbjct: 662 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 721
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+AE + +M + Y L+ + + +K+M + C P W +
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCE--PNYWTYCL 779
Query: 342 KL-HVEGGEVEKADSI----------------LLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
L H+ G + S+ LL+ ++ P ++Y ++ + K G
Sbjct: 780 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 839
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + M G + L++ + K
Sbjct: 840 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTK 874
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 133/341 (39%), Gaps = 24/341 (7%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP--VTSFACNQLLILYKRLDKKKVAD 148
R E Y L+ V++A +F MK G V +F ++ +V D
Sbjct: 251 RNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFT----FLISGLCKSGRVGD 306
Query: 149 VLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
LL M + V + +Y +I + + ++ E M+ G PD T L
Sbjct: 307 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI- 365
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWL 264
+ + + E+AE +L + T L+ Y K D R+ K+ S L
Sbjct: 366 YGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425
Query: 265 DVCMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
D ++ +GKL ++++EA+ + +S + YT+++ Y +
Sbjct: 426 D-----LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 480
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+++K M GC +++L+ V+ ++ KA ++L K Q++ P +Y ++
Sbjct: 481 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK-MQKDGIIPNVITYTTLL 539
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
D + ++F M Q G + L A A
Sbjct: 540 QGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 580
>gi|356533844|ref|XP_003535468.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 813
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 141/331 (42%), Gaps = 7/331 (2%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVL 150
G Y TL+ +K+A E F +M +G T+ N ++ I ++V+ ++
Sbjct: 272 GSHTYNTLIDTYGKAGQLKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLV 331
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
ME+ +Y ILI + + +D+ + E MK +EPD + L Y
Sbjct: 332 RKMEELRCSPNTRTYNILISLYAKHDDIGMATKYFEIMKEACLEPDLVSYRTLLYAYSIR 391
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL---CESNPWLDVC 267
+AE ++KEM+ L+ ++T L +Y + G DQ + +W L N +
Sbjct: 392 KMVGEAEELVKEMDERRLEIDQYTQSALTRMYIKAGMLDQ-SLLWFLRFHVAGNMTSECY 450
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
A+I+A+G+ EAE VF S+ K LS + ++K Y K K L M +
Sbjct: 451 AASIDAYGEHGHTLEAEKVFI-WSQKQKNLSVLEFNVMIKAYGIGKCYEKACQLFDSMEQ 509
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G ++ +L+++ + A L K Q+ Y +++ +AK G +
Sbjct: 510 HGVVADRCSYTSLIQILTTSDQPHMAKPYLKKMQEAGLVSDCI-PYCVVICSFAKLGQLE 568
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
E I+ M + G + L+ + +A
Sbjct: 569 MAEDIYWEMIRHGVQPDVIVYSILINVFSDA 599
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 121/297 (40%), Gaps = 37/297 (12%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILI 169
+A E+F KG + + N +L R + ++V + M + T +Y LI
Sbjct: 134 RALEIFEWFNKKGHELNTIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCSTYGTLI 193
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D+ + ++ M +G++PD T I+ + Y G +KAE K
Sbjct: 194 DVYSKGGRRDDALSWLDMMLGQGVQPDEVTMVIVVQLYKKAGEFQKAEEFFK-------- 245
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA----------IEAWGKLNK 279
+W+ LG + +A + +L E VC A I+ +GK +
Sbjct: 246 --KWS----------LGNDNAMATL-ELDERV----VCANASFGSHTYNTLIDTYGKAGQ 288
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
++EA F +M K +T + ++ + +H L + LV++M E C ++
Sbjct: 289 LKEASETFAKMLKQGVAPTTVTFNTMINICGNHGQLEEVSLLVRKMEELRCSPNTRTYNI 348
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
L+ L+ + ++ A + ++ +P SY ++ Y+ R + E++ M
Sbjct: 349 LISLYAKHDDIGMATK-YFEIMKEACLEPDLVSYRTLLYAYSIRKMVGEAEELVKEM 404
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 143/351 (40%), Gaps = 9/351 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L AK + A Y + + E+ V YRTLL V +AEE+
Sbjct: 344 RTYNILISLYAKHDDIGMATKYFEIMKEACLEPDLVSYRTLLYAYSIRKMVGEAEELVKE 403
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
M ++ + + + L +Y + + + L +T Y ID G+
Sbjct: 404 MDERRLEIDQYTQSALTRMYIKAGMLDQSLLWFLRFHVAGNMTSECYAASIDAYGEHGHT 463
Query: 179 TGMDQV-VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
++V + + K + + ++ K Y G EKA + ME + R +
Sbjct: 464 LEAEKVFIWSQKQKNLSVLEFN--VMIKAYGIGKCYEKACQLFDSMEQHGVVADRCSYTS 521
Query: 238 LLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + + K + + C+ I ++ KL ++E AE ++ M +
Sbjct: 522 LIQILTTSDQPHMAKPYLKKMQEAGLVSDCIPYCVVICSFAKLGQLEMAEDIYWEMIRHG 581
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y+ L+ V++D + + V +M ++G + +++L+KL+ + +EKA
Sbjct: 582 VQPDVIVYSILINVFSDAGRVKEAISYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAQ 641
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
Q + ++SS +I D Y K+ + ++IF +++ G F
Sbjct: 642 EAYKLLQLSEEGPNVYSSNCMI-DLYVKQSMVGQAKQIFDTLKKNGGANEF 691
>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 158/367 (43%), Gaps = 17/367 (4%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-- 152
VY ++ N + + A +F+ M KG + + L+ K+ + D
Sbjct: 162 VYNVVIRNVLRAKQWQLAHGLFDEMLQKGLSPDKYTYSTLI---THFSKQGLFDSSFFWL 218
Query: 153 --MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-IEPDSSTQAILAKHYVS 209
ME++NV Y LI++ + D + + A+K G I PD ++ Y
Sbjct: 219 QQMERDNVSGDLVLYSNLIELSRKLCDYSKAISIFNALKGSGNIVPDLIACNMMISVYGK 278
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWLDV-- 266
+A +L+EM + + + LL +Y + K + V+ ++ E +D+
Sbjct: 279 AKLFREARLLLQEMRDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTT 338
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
C I+ +G+L ++EA+ F M K + + Y +L+VY + + + L M
Sbjct: 339 CNIMIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQ 398
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
G + ++ ++ ++ + E +KA + L++ Q +P +Y I+ + K G +
Sbjct: 399 MKGVPQNVVTYNTMISIYGKSLEHDKATN-LIQEMQSRGIQPNAITYSTIISIWEKAGKL 457
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKALA-- 441
+FH++R G +QT++ AY A A+ R + + DNV A+
Sbjct: 458 DRAAMLFHKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNELKQPDNVSRETAITIL 517
Query: 442 AQVAQVD 448
A+ +VD
Sbjct: 518 ARAGKVD 524
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 154/352 (43%), Gaps = 24/352 (6%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN---CVAGNN--VKKAEEVFN 117
Y++ ++L KL KA S + S G +V + N V G ++A +
Sbjct: 233 YSNLIELSRKLCDYSKAISIFNALKGS--GNIVPDLIACNMMISVYGKAKLFREARLLLQ 290
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKEN-----VKLTQFSYKILIDIK 172
M+D G ++ + + LL +Y +D +K + + L + N + LT + I+ID+
Sbjct: 291 EMRDNGVNPSTASYSTLLAIY--VDNQKFVEAVSLFSEMNEVECPIDLT--TCNIMIDVY 346
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
GQ + D M+ GIEP+ + + + Y G +A + M+ + ++
Sbjct: 347 GQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNV 406
Query: 233 WTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
T ++ +Y + + D+ + + +S P I W K K++ A +F +
Sbjct: 407 VTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHK 466
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ + K+ Y ++ Y +++ K L+ ++ + ++ + + + G+
Sbjct: 467 LRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNELKQPD----NVSRETAITILARAGK 522
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
V++A + +A + K + S + I+D +++ ++F +MR+VG+
Sbjct: 523 VDEAMWVFRQAFDAGEVKDI-SVFGCIIDIFSRERKYAHVVEVFEKMREVGH 573
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 119/279 (42%), Gaps = 15/279 (5%)
Query: 62 DYASC---LDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVF 116
D +C +D+ +L+ +++A+ + + + VV Y T+L +A +F
Sbjct: 335 DLTTCNIMIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLF 394
Query: 117 NRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
+ M+ KG P N ++ +Y K L+ K +++ M+ ++ +Y +I I ++
Sbjct: 395 SLMQMKGVPQNVVTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKA 454
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM-EGDNLKEHRWT 234
L + +++ G++ D + Y G A+ +L E+ + DN+ R T
Sbjct: 455 GKLDRAAMLFHKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNELKQPDNVS--RET 512
Query: 235 CRLLLPLYAELGKADQVARIWKLC-ESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMS 291
+L A GK D+ +++ ++ D+ + I+ + + K VF++M
Sbjct: 513 AITIL---ARAGKVDEAMWVFRQAFDAGEVKDISVFGCIIDIFSRERKYAHVVEVFEKMR 569
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ + +L + + + L KQM E GC
Sbjct: 570 EVGHFPDSNVIALVLNAFGKLRKFERADALYKQMYEEGC 608
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 10/312 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y L+ V ++A EV+ M G + + L++ + + D + V +L ME
Sbjct: 184 TYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDVETVVWLLREME 243
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
VK +SY I I + GQ+ ++++ M+ EG +PD T +L + GR
Sbjct: 244 DHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVS 303
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAI 271
A+ + +M+ + K R T LL + G + V IW +++ + D + A +
Sbjct: 304 DAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVV 363
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+A ++ +V+EA VF +M + + Y +L+ + L+ +L M G
Sbjct: 364 DALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPT 423
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK---PMFSSYMLIMDQYAKRGDIHS 388
+ + + + GE KA +K + K K P + ++ AK G +
Sbjct: 424 PNGYTYVLFINYYGKSGESLKA----IKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGM 479
Query: 389 TEKIFHRMRQVG 400
+++FH ++ +G
Sbjct: 480 AKRVFHELKSIG 491
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 134/320 (41%), Gaps = 7/320 (2%)
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVK 159
A C G V +A +VF++MK KG ++ N L+ + + D+ A ++ M
Sbjct: 365 ALCQVGR-VDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPT 423
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
++Y + I+ G+S + + E MKS+GI PD + GR A+ +
Sbjct: 424 PNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRV 483
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGK 276
E++ + T +++ ++ AD+ +++ ++ E+ DV + I+ K
Sbjct: 484 FHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYK 543
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+ EA +F + + + Y LL + + L+++M + +
Sbjct: 544 AGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLIT 603
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
++ ++ + GEV A +L + P SSY + K + +IF +M
Sbjct: 604 YNTVLDCLCKNGEVNYALGMLYNMTMKGCM-PDLSSYNTALHGLVKEDRLTEAFRIFCQM 662
Query: 397 RQVGYVARFKQFQTLVQAYI 416
++V + T++ +++
Sbjct: 663 KKV-LAPDYTTLCTILPSFV 681
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 128/332 (38%), Gaps = 15/332 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP---VTSFACNQLLILYKRLDKKKVADVL 150
V Y TLL C + + E++N MK G+ V A L R+D+ +DV
Sbjct: 322 VTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDE--ASDVF 379
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+++ ++ Q+SY LI +++ L ++ M G P+ T + +Y
Sbjct: 380 DQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKS 439
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC--- 267
G KA + M+ + +L A+ G+ R++ +S + VC
Sbjct: 440 GESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKS---IGVCPDN 496
Query: 268 ---MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
I+ K + +EA VF M +T +L+ ++ + +
Sbjct: 497 ITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHE 556
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
+ E ++ L+ G+V++ LL+ N + P +Y ++D K G
Sbjct: 557 LKEMNLDPTDCTYNTLLAGLGREGKVKEVMH-LLEEMNSNSYPPNLITYNTVLDCLCKNG 615
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+++ + + M G + + T + +
Sbjct: 616 EVNYALGMLYNMTMKGCMPDLSSYNTALHGLV 647
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 41 GKALQLSEWLETNKKLDF--IERDYASCLDLIAKL---RGLQKA-ESYIQKIPESFR-GE 93
GK++++ + L+ K++ E Y + +I+ L + L +A + Y + + E F
Sbjct: 822 GKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTP 881
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
Y LL + ++ AE++F+ M D G N LL Y+ + +KV ++
Sbjct: 882 CTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQN 941
Query: 153 MEKENVKLTQFSYKILID---IKGQSND-LTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
M + + SY +LI G+ ND L+ Q+ E G+EPD T +L
Sbjct: 942 MVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTEL----GLEPDLITYNLLIHGLG 997
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
GR E+A ++ +ME + + +T L+ + GKA + ++++ N W
Sbjct: 998 RSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNGW 1052
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 186/446 (41%), Gaps = 65/446 (14%)
Query: 38 RMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAE---SYIQKIPESFRGEV 94
R++ + +++ +++E K L ER SC L+ L+ + + + ++ ES + E+
Sbjct: 159 RLFDETIRVYDYVE-EKGLVIEER---SCFVLLLALKRCGEVDFCVRFFHRMVESNKFEI 214
Query: 95 VYRTLL----ANCVAGNNVKKAEEVFNRMKDKGF-PVTSFACNQLLILY-KRLDKKKVAD 148
++L C G V+KA+E+ + M KG F N LL Y R D+K V +
Sbjct: 215 RVQSLTLVIDVLCRRGE-VEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDE 273
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE-------------- 194
+L LMEKE V + +Y ILI S D+ +++ E M+ + IE
Sbjct: 274 ILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSR 333
Query: 195 ---------------------PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
P++ T L G+ E AE +L EM+ + +
Sbjct: 334 RLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLV 393
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCMAAIEAWG--KLNKVEEAEAVFKRM 290
+ Y GK D+ R+ + E DV I A G KL++ +EA+ + M
Sbjct: 394 IFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSM 453
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
+ K + +T +++Y L++ + L + M + G + ++ L+ + + +V
Sbjct: 454 VEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKV 513
Query: 351 EKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
++A I K++ NK P +Y ++ G + K+F+ MR G +
Sbjct: 514 KQAHKI--KSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYT 571
Query: 410 TLVQAYINAKTPAYGIRDRMRADNVF 435
+++ G+ RAD F
Sbjct: 572 SMIS----------GLSKEGRADEAF 587
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 163/385 (42%), Gaps = 13/385 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
+ ++ KL+ QKAES + + + + V+ L+ A ++A +FN M
Sbjct: 782 HTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMM 841
Query: 121 DKGFPVTSFACN---QLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
G T + N Q LI+ RLD+ V V+ ++ K+++ S +++D + +
Sbjct: 842 RDGPSPTVDSVNGLMQALIVDGRLDELYV--VIQELQDMGFKISKSSITLMLDAFAHAGN 899
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + ++ + MK+ G P I+ G R EAM+ EME K
Sbjct: 900 IFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNS 959
Query: 238 LLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+L LY +G + ++++L + P D I + + + EE ++ M +
Sbjct: 960 VLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVG 1019
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y +L+ + +M+ + ++L + + C + + ++K+ G KA+
Sbjct: 1020 LEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAE 1079
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
LL ++ +P ++ L+M Y+ G EK+ ++ G + +++ A
Sbjct: 1080 K-LLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDA 1138
Query: 415 YINAKTPAYGIRD--RMRADNVFPN 437
Y+ I+ M+ D + P+
Sbjct: 1139 YLKNGDHNVAIQKLMEMKKDGLEPD 1163
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 124/307 (40%), Gaps = 47/307 (15%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y TL++ C +N+++A +V+N M + C L
Sbjct: 327 ITYNTLISACSRESNLEEAVKVYNDM-------VAHRCQPDL------------------ 361
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
++Y +I + G+ ++ + ++S+G PD+ T L + G
Sbjct: 362 ---------WTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNV 412
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAA 270
+K + + ++M + T ++ +Y + G+ D +++ KL +P
Sbjct: 413 DKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVL 472
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I++ GK N ++EA V M K + + ++AL+ YA + ++ M SG
Sbjct: 473 IDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGI 532
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ---NKFKPMFSSYMLIMDQYAKRG--- 384
LA+ ++ + + E KA +K Q+ + FKP + Y +++ K
Sbjct: 533 KPDHLAYSVMLDILLRFNESGKA----MKLYQEMVLHSFKPDHALYEVMLRVLGKENREE 588
Query: 385 DIHSTEK 391
D+H K
Sbjct: 589 DVHKVVK 595
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 124/310 (40%), Gaps = 10/310 (3%)
Query: 98 TLLANCVAGNNVKKAEEVFNRMKD-KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEK 155
T+L+ N A E+F R + G V + N ++ +Y R + KV ++L LM
Sbjct: 225 TILSVLGKANQEALAVEIFARAEAAXGNTVQVY--NAMMGVYARTGRFTKVQELLDLMRS 282
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTG--MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ S+ LI+ + +S + +++ ++ GI+PD T L
Sbjct: 283 RGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNL 342
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AA 270
E+A + +M + WT ++ +Y G + + R++K ES +L + +
Sbjct: 343 EEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSL 402
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ A+ + V++ + + + M K Y ++ +Y L M SG
Sbjct: 403 LYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGR 462
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + L+ + +++A + + KP ++ ++ YAK G E
Sbjct: 463 SPDAVTYTVLIDSLGKANMIKEAAEV-MSEMLNAXVKPTLRTFSALICGYAKAGKRVEAE 521
Query: 391 KIFHRMRQVG 400
+ F M + G
Sbjct: 522 ETFDCMLRSG 531
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 8/243 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V Y +LL NV K +E+ M GF N ++ +Y + + +A L
Sbjct: 397 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSD 456
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ +Y +LID G++N + +V+ M + ++P T + L Y G+
Sbjct: 457 MKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGK 516
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPL---YAELGKADQVARIWKLCESNPWLDVCMA 269
+ +AE M +K ++L + + E GKA ++ + L P +
Sbjct: 517 RVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEV 576
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ GK N+ E+ V K M ++L + + + + ++++ G
Sbjct: 577 MLRVLGKENREEDVHKVVKDM----EELCGMNSQVICSILVKGECFDHAANMLRLAISQG 632
Query: 330 CHI 332
C +
Sbjct: 633 CEL 635
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 55/334 (16%), Positives = 125/334 (37%), Gaps = 35/334 (10%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+Y +LL C +A ++F+ M+ G + +++ Y ++ + A L+
Sbjct: 709 TMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQ 768
Query: 153 MEKENVKLTQFS-YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
E++ + S + +I+ G+ + +V +++ + D L Y + G
Sbjct: 769 AEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAASG 828
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
E+A A+ M D +P +D +
Sbjct: 829 CYERARAIFNTMMRDG--------------------------------PSPTVDSVNGLM 856
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+A +++E V + + K+S T +L +A + + K + + M +G
Sbjct: 857 QALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYF 916
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ ++ L +G V ++ ++ + FKP S + ++ Y GD T +
Sbjct: 917 PTMHLYRIMIGLLAKGKRVRDVEA-MVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQ 975
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
++ +++ G + TL+ Y + P G+
Sbjct: 976 VYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGL 1009
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 178/438 (40%), Gaps = 46/438 (10%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P++ I+++L E D+ E A+A T M + +QL+E + +
Sbjct: 164 PNVHIYTSLIHAYAEARDM---EGAVAC----TEEMLSQGIQLNEAV------------F 204
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMK 120
S + A + AE + +K G +VY +++ A C AGN ++ E + +M+
Sbjct: 205 CSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGN-METVEALLAQME 263
Query: 121 DKGFP---------VTSFAC----NQLLILYKRL-------DKKKVADVLLLMEKENVKL 160
++GF + FA + L + RL + K D+L M+K V
Sbjct: 264 EEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSP 323
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
+ Y +++D + D T +V E M S G++PD IL + GR +KA +L
Sbjct: 324 NKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVL 383
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKL 277
+ +E + L T +L Y + G + ++ K P + + + K
Sbjct: 384 ENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKA 443
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
++E A + M S + YTAL + YA + K + ++M + I +A+
Sbjct: 444 RQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAY 503
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
AL+K G + A + + + ++ YA+ G + E++ M
Sbjct: 504 GALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAME 563
Query: 398 QVGYVARFKQFQTLVQAY 415
+ G + +L+ AY
Sbjct: 564 RDGTKPDTLIYNSLINAY 581
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 8/255 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LM 153
Y ++L V G N++KA EVF+R+K G + N LL + + + A ++L M
Sbjct: 397 TYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEM 456
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
V ++ Y L + ++ D+ V + MK E + D L K + G
Sbjct: 457 LANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAM 516
Query: 214 EKAEAMLKEMEGDNLKEHRWT-CRLLLPLYAELGKADQVARIWKLCE---SNPWLDVCMA 269
A + +++ LK ++ T C +L YA G+ ++ + E + P + +
Sbjct: 517 HGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNS 576
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLS---TKHYTALLKVYADHKMLSKGKDLVKQMA 326
I A+G + E+ EA+ +M K+ K + Y L++VYA + + ++L + +A
Sbjct: 577 LINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLA 636
Query: 327 ESGCHIGPLAWDALV 341
W AL+
Sbjct: 637 RLKLVPDATTWTALM 651
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 129/330 (39%), Gaps = 26/330 (7%)
Query: 134 LLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ Y R K A M ++K Y LI ++ D+ G E M S+G
Sbjct: 137 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 196
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
I+ + + + Y S G E AE ++ + +NL ++ Y + G + V
Sbjct: 197 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 256
Query: 253 RIWKLCESNPW---LDVCMAAIEAWGKLNKVEEAEAVFKR---------MSKTWKKLS-- 298
+ E + L + + + ++ E+ + F R M+K L
Sbjct: 257 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEM 316
Query: 299 TKH--------YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
KH Y ++ YA + + + M +G + ++ LV + G +
Sbjct: 317 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRM 376
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
+KA + L+ + N+ P +Y I+D Y K G+I ++F R++ G + +
Sbjct: 377 DKALGV-LENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNS 435
Query: 411 LVQAYINAKT--PAYGIRDRMRADNVFPNK 438
L+ A+ A + + M A+ V P++
Sbjct: 436 LLSGLAKARQMENARLMLNEMLANGVVPSE 465
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 24/279 (8%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +L+D + D EAM++ I+P+ L Y E A A +EM
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW--KLCESN--PWLDVCMAAIEAWGKLNKV 280
++ + ++ YA G ++ A W K N P V + ++A+ + +
Sbjct: 194 SQGIQLNEAVFCSIISGYASAGN-NEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNM 252
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
E EA+ +M + + + YT +L +A+ + E C L++
Sbjct: 253 ETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIR------------DEEKC----LSFFHR 296
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+K+ + G + KA I L+ ++ P Y +IMD YA+ GD + K++ M G
Sbjct: 297 LKVSPQAGNMAKALDI-LEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 355
Query: 401 YVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
+ LV A+ A A G+ + + A+ + P
Sbjct: 356 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPT 394
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 95/247 (38%), Gaps = 43/247 (17%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTL 99
KAL + E +E N+ L IE Y S LD K +QKA +I + G V Y +L
Sbjct: 378 KALGVLENIEANRLLPTIET-YTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSL 436
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENV 158
L+ ++ A + N M G + L Y R D +K V M+KEN+
Sbjct: 437 LSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENL 496
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQV---------------------------------- 184
+ +Y L+ S + G +V
Sbjct: 497 AIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAE 556
Query: 185 --VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR---WTCRLLL 239
V AM+ +G +PD+ L Y GR E EA+L +M + K+ + T L+
Sbjct: 557 ELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLI 616
Query: 240 PLYAELG 246
+YA+ G
Sbjct: 617 QVYAQAG 623
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 141/353 (39%), Gaps = 36/353 (10%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +D + K + + AE QK+ + V Y T++ V +AE VF +M
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322
Query: 121 DKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
D+G N ++ L K K V M + VK +Y I+ID ++ +
Sbjct: 323 DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVD 382
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ V + M +G++P++ T L Y+S G+ E+ +KEM +L+ +T LLL
Sbjct: 383 RAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLL 442
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
+ GK + EA ++F M + K S
Sbjct: 443 DYLCKNGKCN--------------------------------EARSLFDSMIRKGIKPSV 470
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y +L Y LS+ DL+ M +G ++ ++ + + +++ I +K
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+QQ P +Y ++D K G + F++M G F +LV
Sbjct: 531 MKQQG-LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV 582
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/397 (18%), Positives = 152/397 (38%), Gaps = 50/397 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y + +D + K + + KAE Q++ P++ + Y ++ +V +AE VF
Sbjct: 333 YNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDN----LTYTIIIDGLCKAQSVDRAEGVF 388
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
+M DKG + N L+ Y + ++V + M +++ F+Y +L+D ++
Sbjct: 389 QQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKN 448
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
+ ++M +GI+P + I+ Y G + +L M + + +
Sbjct: 449 GKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIF 508
Query: 236 RLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
++ YA+ D+V I+ K +P + I+A KL +V++A F +M
Sbjct: 509 NTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMIN 568
Query: 293 T---------------------WKKL--------------STKHYTALLKVYADHKMLSK 317
W+K+ + +L + +
Sbjct: 569 EGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVME 628
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ L+ M G ++++ L+ H +++A LL KP SY ++
Sbjct: 629 ARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVK-LLDGMVSAGLKPNIVSYNTLL 687
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
Y K G I + +F M + G + + T++
Sbjct: 688 HGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNG 724
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 129/330 (39%), Gaps = 48/330 (14%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y T++ V +AE+VF +M +KG
Sbjct: 226 VTYNTIIDGLCKAQEVDRAEDVFQQMVEKG------------------------------ 255
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
VK +Y +ID ++ ++ + V + M +G++P + T +
Sbjct: 256 ----VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAV 311
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD--VCMAA 270
++AE + ++M +K T ++ + D+ ++ ++ + D
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTII 371
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK--DLVKQMAES 328
I+ K V+ AE VF++M K + Y L+ H LS G+ ++V+++ E
Sbjct: 372 IDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLI-----HGYLSTGQWEEVVQRIKEM 426
Query: 329 GCH-IGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
H + P + L+ + G+ +A S L + + KP + Y +++ Y K+G
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARS-LFDSMIRKGIKPSVTIYGIMLHGYGKKGA 485
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + + M G + F T++ AY
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAY 515
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 15/188 (7%)
Query: 253 RIWKLCESNPWLDVCMAAI--EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
R+ + C + D C +I + ++ ++E A F + KT ++ LLK
Sbjct: 71 RMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLC 130
Query: 311 DHKMLSKGKD-LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQQNKFK 367
D K + + L++QM E GC +G ++++ L+K + E+A +L + Q +
Sbjct: 131 DTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCS 190
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRD 427
P SY ++++ + G + +F M G + T++ A+ +
Sbjct: 191 PDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQ-------E 240
Query: 428 RMRADNVF 435
RA++VF
Sbjct: 241 VDRAEDVF 248
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+ K +V+ AE VF++M K S Y ++ + + + + + +QM + G
Sbjct: 267 IDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGV 326
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ ++ ++ + ++KA+ + + + KP +Y +I+D K + E
Sbjct: 327 KPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG-VKPDNLTYTIIIDGLCKAQSVDRAE 385
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINA 418
+F +M G + L+ Y++
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLST 413
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 142/358 (39%), Gaps = 47/358 (13%)
Query: 63 YASCLDLIAKLRGLQKAE-SYIQKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +D + KL + A + Q I E VV+ +L+ + +K EE+F M
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML 602
Query: 121 DKGF-PVTSFACNQLLILYKR---LDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
++G P F L L K ++ +++ D ++ M +K SY LID ++
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCM---GLKPDVISYNTLIDGHCFAS 659
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM------------- 223
+ ++++ M S G++P+ + L Y GR + A + +EM
Sbjct: 660 RMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYN 719
Query: 224 -------EGDNLKEHR------------W---TCRLLLPLYAELGKADQVARIWK-LCES 260
E R W T ++L + + D+ +I++ LC
Sbjct: 720 TILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSM 779
Query: 261 NPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
+ LD+ I+ K + E+A +F + S Y + + + L +
Sbjct: 780 DLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEEL 839
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
L M +SG +AL++ ++ GE+ +A + L K ++N ++ MLI
Sbjct: 840 DCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLI 897
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/364 (18%), Positives = 140/364 (38%), Gaps = 44/364 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI----------------L 137
+ Y L+ C N+++KA + +RM+ G+P + F L+I L
Sbjct: 185 LTYNALINACARNNDLEKAINLISRMRQDGYP-SDFVNYSLIIQSLVRSNRIDSPILQKL 243
Query: 138 YKRL-----------------------DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQ 174
Y + D K + L +++ + + +I G
Sbjct: 244 YSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGD 303
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
S + + + E MK G++P + L K YV G + AE ++ EME + T
Sbjct: 304 SGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECT 363
Query: 235 CRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
LL+ Y+ G+ + + K E+N P V + ++ + +++ V K M
Sbjct: 364 YSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMK 423
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ + Y ++ + L D +M G + W+ L+ H + E
Sbjct: 424 NSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHE 483
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+A+ L + + F P +++ ++++ + ++ + + MR +G + + TL
Sbjct: 484 RAEE-LFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTL 542
Query: 412 VQAY 415
+ Y
Sbjct: 543 IDIY 546
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 115/262 (43%), Gaps = 8/262 (3%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K+ + LL +++ L+ +Y LI+ ++NDL ++ M+ +G D +++
Sbjct: 168 EKLYEAFLLSQQQ--ALSPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLI 225
Query: 204 AKHYVSGGRKEKA--EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
+ V R + + + E++ D L+ ++ +A+ G ++ + +++
Sbjct: 226 IQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQAS 285
Query: 262 ---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P +A I A G ++ EAEA+F+ M K T+ Y LLK Y ML
Sbjct: 286 GLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDA 345
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ +V +M SG + L+ + G E A I+LK + N P + I+
Sbjct: 346 EFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESA-RIVLKEMEANNIMPNSYVFSRILA 404
Query: 379 QYAKRGDIHSTEKIFHRMRQVG 400
Y RG+ + ++ M+ G
Sbjct: 405 SYRDRGEWQKSFQVLKEMKNSG 426
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 137/349 (39%), Gaps = 46/349 (13%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
+ +AE +F MKD G + A N LL Y + K A+
Sbjct: 307 IIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEF------------------- 347
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+V M+ G+ PD T ++L Y + GR E A +LKEME +N+
Sbjct: 348 ---------------IVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNI 392
Query: 229 KEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
+ + +L Y + G K+ QV + K P I+ +GK + ++ A
Sbjct: 393 MPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMD 452
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
F +M + T + L+ + ++ + ++L ++M E G ++ ++
Sbjct: 453 TFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMIN--- 509
Query: 346 EGGEVEKADSI--LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
GE E+ D + L+ + P +Y ++D Y K G + M+ G
Sbjct: 510 SFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKP 569
Query: 404 RFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPNKALAAQVAQVDAF 450
+ L+ AY + MRAD++ P +L A + ++AF
Sbjct: 570 SSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKP--SLLALNSLINAF 616
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 123/312 (39%), Gaps = 5/312 (1%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLL 151
E Y L+ + A V M+ S+ +++L Y+ R + +K VL
Sbjct: 361 ECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLK 420
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M+ V+ + Y ++ID G+ + L + M SEGI+PD+ T L +
Sbjct: 421 EMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAE 480
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
E+AE + +EM T +++ + E + D V + S P +
Sbjct: 481 LHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYT 540
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +GK + +A + M K S+ Y AL+ YA + + + + M
Sbjct: 541 TLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRAD 600
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
LA ++L+ E +A S+ LK ++N KP +Y +M + +
Sbjct: 601 SLKPSLLALNSLINAFGEDRRDAEAFSV-LKYMKENDLKPDVVTYTTLMKALIRVDKFNK 659
Query: 389 TEKIFHRMRQVG 400
++ M G
Sbjct: 660 VPSVYEEMILAG 671
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 46/308 (14%)
Query: 31 MANLRTRRMYGKALQ-LSEWLETNKKLDFIERDYASCLDLIAKLRGLQKA-ESYIQKIPE 88
+A+ R R + K+ Q L E + + D Y +D K L A +++ + + E
Sbjct: 403 LASYRDRGEWQKSFQVLKEMKNSGVRPD--RHFYNVMIDTFGKFSCLDHAMDTFDKMLSE 460
Query: 89 SFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMKDKGFP--VTSFACNQLLILYKRLDKKK 145
+ + V L +C + ++AEE+F M +KGF VT+F +++ ++++
Sbjct: 461 GIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFN----IMINSFGEQER 516
Query: 146 VADVLLLM---EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
DV LM + +Y LIDI G+S + + +E MKS G++P S+
Sbjct: 517 WDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNA 576
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
L Y G E+A + M D+LK P
Sbjct: 577 LINAYAQKGLSEQAVNAFRLMRADSLK--------------------------------P 604
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
L + I A+G+ + EA +V K M + K YT L+K +K +
Sbjct: 605 SLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVY 664
Query: 323 KQMAESGC 330
++M +GC
Sbjct: 665 EEMILAGC 672
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 154/350 (44%), Gaps = 17/350 (4%)
Query: 76 LQKAESYIQKIPE-SFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFAC 131
+ KAE+ ++++ E + +Y T++ + K VF R K+ G V ++ C
Sbjct: 34 MDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGC 93
Query: 132 NQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
L+ LY +L K K +V ME +K +Y +LI+ + D + E +
Sbjct: 94 --LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIK 151
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY------AE 244
+GI+PD + + G+ ++A +KEM+ + H+ T R +P+ E
Sbjct: 152 DGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQK---QRHKPTTRTFMPIIHGFARKGE 208
Query: 245 LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
+ KA V + ++ P + A I + K+E+AE + M+ + YT
Sbjct: 209 MKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTT 268
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
++ YA K ++ + G + ++AL+K + G ++ A ++ + QN
Sbjct: 269 IMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQN 328
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ F Y +++D +A+RGD+ + +M++ G + + + A
Sbjct: 329 IPRNTF-IYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINA 377
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 135/332 (40%), Gaps = 7/332 (2%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
A+ F K+K + + ++ Y +R + K ++ ME+E + Y ++D
Sbjct: 2 ADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMD 61
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
D V E K G+ P T L Y G+ KA + KEME +K
Sbjct: 62 GYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKH 121
Query: 231 HRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVF 287
+ T +L+ + +L A+ A L + DV + I A+ + K++ A
Sbjct: 122 NMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTV 181
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
K M K K +T+ + ++ +A + K D+ M SGC ++AL+ VE
Sbjct: 182 KEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEK 241
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
++EKA+ IL + P +Y IM YA GD F ++R G
Sbjct: 242 RKMEKAEQILDEMTLAG-VSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYT 300
Query: 408 FQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
++ L++A + A + M A N+ N
Sbjct: 301 YEALLKACCKSGRMQSALAVTKEMSAQNIPRN 332
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 3/176 (1%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEV-VYRTLLANCVAGNNVKKAEEVFN 117
E Y + + A L KA +Y K+ E + +V Y LL C ++ A V
Sbjct: 263 EHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 322
Query: 118 RMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
M + P +F N L+ + +R D + AD++ M++E V+ +Y I+ ++
Sbjct: 323 EMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAG 382
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
D+ + +E MKS G++P+ T L + EKA + +EM+ LK R
Sbjct: 383 DMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDR 438
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 4/205 (1%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTL 99
KAL + + + + + + A L L+ K R ++KAE + ++ + E Y T+
Sbjct: 211 KALDVFDMMRMSGCIPTVHTYNALILGLVEK-RKMEKAEQILDEMTLAGVSPNEHTYTTI 269
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENV 158
+ + + KA F +++D+G + + LL + + + A V M +N+
Sbjct: 270 MHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNI 329
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
F Y ILID + D+ +++ MK EG++PD T G ++A
Sbjct: 330 PRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATK 389
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYA 243
++EM+ +K + T L+ +A
Sbjct: 390 TIEEMKSVGVKPNVKTYTTLINGWA 414
>gi|357125724|ref|XP_003564540.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Brachypodium distachyon]
Length = 652
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 139/335 (41%), Gaps = 14/335 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
V Y LL ++ A + M+ +G +F+ + LL R A L L
Sbjct: 119 VPYNLLLRAASRAGQLRLASGLLLEMRHRGVAADAFSYSTLLAALTRAGHLDHALTFLPL 178
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD-SSTQAILAKHYVSGG 211
ME + V + LI + + D + +++ GI PD + A +A + S
Sbjct: 179 MEADAVSPDLVLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAIAAYCKSDL 238
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCESNPWLDVC 267
++ +L ++ D + + +L A G+ ++ + P L V
Sbjct: 239 LRDAKRLLLHDIPADGVAPDAESYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVF 298
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ A+G+L+ EA+ +F M +T S Y +L+VY D + + L M
Sbjct: 299 NIVLNAYGQLDLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMCS 358
Query: 328 S-----GCHIGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
S G + P + ++ ++ +H + E EKA S L++ Q N +P +Y I+ +
Sbjct: 359 SASDGNGSSVKPNVVTYNTIISIHGKSLEDEKAGS-LVRDMQANGIQPNAVTYSTILSIW 417
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
K G + K+F ++ + G +QT+V AY
Sbjct: 418 VKAGKLDRAAKLFEKLLESGTEIDPVLYQTMVVAY 452
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 139/366 (37%), Gaps = 44/366 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V++ L+ + G + +A +F+R++ G A N + Y + D + A LLL
Sbjct: 189 VLFSNLIHLALRGGDAPRALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLRDAKRLLLH 248
Query: 153 -MEKENVKLTQFSYK-ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
+ + V SY IL + + L + ++PD S I+ Y
Sbjct: 249 DIPADGVAPDAESYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAYGQL 308
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-CES--------- 260
+A+ + M + T +L +Y + G + ++ L C S
Sbjct: 309 DLAREADRLFWSMRRTGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMCSSASDGNGSSV 368
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P + I GK + E+A ++ + M + + Y+ +L ++ L +
Sbjct: 369 KPNVVTYNTIISIHGKSLEDEKAGSLVRDMQANGIQPNAVTYSTILSIWVKAGKLDRAAK 428
Query: 321 LVKQMAESGCHIGPLAWDALV-------------------KLHVEGGEVEKADSILLKAQ 361
L +++ ESG I P+ + +V K EG E A SIL A
Sbjct: 429 LFEKLLESGTEIDPVLYQTMVVAYERAGLVSQAKRLLRELKDPAEGIPTETAISILANAG 488
Query: 362 QQNKFKPMF------------SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+ + +F S + +MD +AK S ++F MR++G++ +
Sbjct: 489 RVEEAAWLFRRAVNTGEVRDPSVHRAMMDLFAKNRRHRSVVEVFDEMRKLGHLPDSETIA 548
Query: 410 TLVQAY 415
T + AY
Sbjct: 549 TAMNAY 554
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 153/383 (39%), Gaps = 25/383 (6%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTL 99
+ A +L E +E N L E YA D + K ++A S+I + + +V Y TL
Sbjct: 433 FDNAFRLFEMMEQNG-LKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALT-KVYYTTL 490
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENV 158
+ N A + RM D+G S+ + LL L K+ + +L M +
Sbjct: 491 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 550
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K T F+Y ILID + ++ M S G +P ++T + Y GR E AE
Sbjct: 551 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 610
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWLDVCMA---- 269
++ +ME + + T +L+ +G D+ K CE N W C+
Sbjct: 611 LILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW-TYCLLLKHL 669
Query: 270 ---------AIEAWGKLNKVEE--AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
+++ G N +E + +RM K + Y++L+ + L +
Sbjct: 670 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 729
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
L+ M G + L+K + EKA S + + F+P SY L++
Sbjct: 730 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS-FVSIMSECGFQPQLESYRLLVV 788
Query: 379 QYAKRGDIHSTEKIFHRMRQVGY 401
GD + +F + ++GY
Sbjct: 789 GLCNEGDFEKVKSLFCDLLELGY 811
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 135/353 (38%), Gaps = 14/353 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y T++ + ++ A F + + G +F CN L++ Y R + +K + L+
Sbjct: 69 VTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLM 128
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + ++SY ILI + + + MK +G P+ L GR
Sbjct: 129 MPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGR 188
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
A + M + + T ++ Y++LG+ + +I +L E N C
Sbjct: 189 VGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG----CHPDDW 244
Query: 273 AWGKL------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ L K EEAE + K + +T L+ Y + + +M
Sbjct: 245 TYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMM 304
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
S C + + L+ ++ +++A LL N P +Y I+D Y K G +
Sbjct: 305 SSKCKLDLQVFGKLINSLIKKDRLKEAKE-LLNEISANGLVPNVITYTSIIDGYCKSGKV 363
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
++ M + G + +L+ + K A + +M+ D + PN
Sbjct: 364 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 416
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/349 (18%), Positives = 128/349 (36%), Gaps = 43/349 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+ Y +++ V A EV M+ G ++ N L+ Y + KK+ + L
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLM--YGLVKDKKLHKAMALL 405
Query: 153 --MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+K+ + +Y L+ + +D ++ E M+ G++PD A+L
Sbjct: 406 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA 465
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
GR E+A + + +G L + +T
Sbjct: 466 GRAEEAYSFIVR-KGVALTKVYYT----------------------------------TL 490
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+ + K + A + +RM + Y+ LL K L++ ++ QM+ G
Sbjct: 491 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 550
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
A+ L+ + G+ + A + + KP ++Y + ++ Y K G + E
Sbjct: 551 KCTIFAYTILIDEMLREGKHDHAKR-MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 609
Query: 391 KIFHRMRQVGYVARFKQFQTLVQ--AYINAKTPAYGIRDRMRADNVFPN 437
+ +M + G + L+ ++ A+ RM + PN
Sbjct: 610 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPN 658
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 147/395 (37%), Gaps = 36/395 (9%)
Query: 56 LDFIERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVA 105
L +ERD Y S + + K + L KA + + K+ + + Y TLL
Sbjct: 370 LKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 429
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFS 164
++ A +F M+ G A +L L K + + + ++ V LT+
Sbjct: 430 EHDFDNAFRLFEMMEQNGLKPDEHA---YAVLTDALCKAGRAEEAYSFIVRKGVALTKVY 486
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LID ++ + ++E M EG PDS T ++L R +A +L +M
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS 546
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVE 281
+K + +L+ GK D R++ S+ P I ++ K ++E
Sbjct: 547 LRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLE 606
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+AE + +M + Y L+ + + +K+M + C P W +
Sbjct: 607 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCE--PNYWTYCL 664
Query: 342 KL-HVEGGEVEKADSI----------------LLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
L H+ G + S+ LL+ ++ P ++Y ++ + K G
Sbjct: 665 LLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAG 724
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + M G + L++ + K
Sbjct: 725 RLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTK 759
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 129/323 (39%), Gaps = 24/323 (7%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP--VTSFACNQLLILYKRLDKKKVAD 148
R E Y L+ V+KA +F MK G V +F ++ +V D
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFT----FLISGLCKSGRVGD 191
Query: 149 VLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
LL M + V + +Y +I + + ++ E M+ G PD T L
Sbjct: 192 ARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI- 250
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWL 264
+ + + E+AE +L + T L+ Y K D R+ K+ S L
Sbjct: 251 YGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 310
Query: 265 DVCMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
D ++ +GKL ++++EA+ + +S + YT+++ Y +
Sbjct: 311 D-----LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDI 365
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+++K M GC +++L+ V+ ++ KA ++L K Q++ P +Y ++
Sbjct: 366 ALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK-MQKDGIIPNVITYTTLL 424
Query: 378 DQYAKRGDIHSTEKIFHRMRQVG 400
D + ++F M Q G
Sbjct: 425 QGQCDEHDFDNAFRLFEMMEQNG 447
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 143/344 (41%), Gaps = 19/344 (5%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLT 161
C +G V A + + M G + + N LL Y R D +V ++L +ME E ++ T
Sbjct: 25 CKSGR-VDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEAT 83
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
G +V++ G+EP+ T +L + G+ E AE +L
Sbjct: 84 V-----------GDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 132
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-NPWLDVCMAAIEAWG--KLN 278
+M+G + ++ ++ Y G D +I E LD+ A G ++N
Sbjct: 133 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVN 192
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+++EA+ + M + + YT L+ ++ + + + L ++MAE G + ++
Sbjct: 193 RLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN 252
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + + G + +A+ K ++ F P +Y ++ + G + K+F M+Q
Sbjct: 253 VMIHGYAKKGSIREAER-FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQ 311
Query: 399 VGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNKAL 440
G + L+ A+ + D M + P+ +L
Sbjct: 312 RGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSL 355
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/446 (21%), Positives = 190/446 (42%), Gaps = 33/446 (7%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLD-------FIERD 62
S + K EEG ++S ++ + G A W + K++ + +
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKA---GHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
YA C + +++AE+ ++++ E +Y T++ + KK VF R+K
Sbjct: 422 YAHC-----QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+ GF T L+ LY ++ K K +V +M++E VK +Y ++I+ + D
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V E M EG++PD + + G ++A +KEM+ L+ HR T R +
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ--KLR-HRPTTRTFM 593
Query: 240 PL---YAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
P+ YA+ G ++ +V + + C P + I L + +A + M+
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING---LVEKRQAVEILDEMTLA 650
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ YT +++ YA K + ++ G + ++AL+K + G ++ A
Sbjct: 651 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 710
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ + +N + F Y +++D +A+RGD+ + +M++ G + + +
Sbjct: 711 LAVTKEMSARNIPRNSF-VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 769
Query: 414 AYINAK--TPAYGIRDRMRADNVFPN 437
A A A + M A V PN
Sbjct: 770 ACSKAGDMNRATQTIEEMEALGVKPN 795
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 146/344 (42%), Gaps = 6/344 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSY 165
++ +A E F RM+ +G TS L+ Y D + + M++E ++++ +Y
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+++ ++ D + K ++S + + E+AEA+++EME
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 226 DNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ + ++ Y A+ K V + K C P + I + K+ K+ +
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A V + M + K + K Y+ ++ + K + + + M + G + ++ ++
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
G +++A + K Q+ + +P ++M I+ YAK GD+ + ++F MR+ G V
Sbjct: 563 AFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 403 ARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQ 446
F L+ + K A I D M V N+ ++ Q
Sbjct: 622 PTVHTFNGLINGLVE-KRQAVEILDEMTLAGVSANEHTYTKIMQ 664
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 22/228 (9%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y LL C ++ A V M + P SF N L+ + +R D + AD++ M
Sbjct: 693 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 752
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+KE VK +Y I ++ D+ Q +E M++ G++P+ T L K +
Sbjct: 753 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 812
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLY---AELGKADQVARIWKLC----ESNPWLDV 266
EKA + +EM+ +K + LL A + +A + + +C E+ +D+
Sbjct: 813 EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDM 872
Query: 267 --------CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
C+ IEA G E E + K W S H+ L
Sbjct: 873 GTAVHWSKCLCKIEASGG----ELTETLQKTFPPDWS--SHHHHHGFL 914
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 109/270 (40%), Gaps = 10/270 (3%)
Query: 68 DLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLA---NCVAGNNVKKAEEVFNRMKDK 122
++I+ G+ + IQ + E R RT + +++++ EVF+ M+
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
G T N L+ ++K++ ++L M V + +Y ++ D
Sbjct: 619 GCVPTVHTFNGLI--NGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAF 676
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+ +++EG++ D T L K GR + A A+ KEM N+ + + +L+ +
Sbjct: 677 EYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGW 736
Query: 243 AELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
A G + A + + + P + + I A K + A + M K +
Sbjct: 737 ARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNI 796
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESG 329
K YT L+K +A + K ++M G
Sbjct: 797 KTYTTLIKGWARASLPEKALSCYEEMKAMG 826
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
++ +G+ + A F+RM +++ YT+L+ YA + + + V++M E G
Sbjct: 316 VKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI 375
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + + +V + G E AD +A++ +K S Y I+ + + ++ E
Sbjct: 376 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA-SIYGKIIYAHCQTCNMERAE 434
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
+ M + G A + T++ Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGY 459
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 182/421 (43%), Gaps = 31/421 (7%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLD-------FIERD 62
S + K EEG ++S ++ + G A W + K++ + +
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKA---GHAEAADYWFDEAKRIHKTLNASIYGKII 421
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
YA C + +++AE+ ++++ E +Y T++ + KK VF R+K
Sbjct: 422 YAHC-----QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+ GF T L+ LY ++ K K +V +M++E VK +Y ++I+ + D
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V E M EG++PD + + G ++A +KEM+ L+ HR T R +
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ--KLR-HRPTTRTFM 593
Query: 240 PL---YAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
P+ YA+ G ++ +V + + C P + I L + +A + M+
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING---LVEKRQAVEILDEMTLA 650
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ YT +++ YA K + ++ G + ++AL+K + G ++ A
Sbjct: 651 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 710
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ + +N + F Y +++D +A+RGD+ + +M++ G + + +
Sbjct: 711 LAVTKEMSARNIPRNSF-VYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 769
Query: 414 A 414
A
Sbjct: 770 A 770
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 146/344 (42%), Gaps = 6/344 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSY 165
++ +A E F RM+ +G TS L+ Y D + + M++E ++++ +Y
Sbjct: 323 GDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY 382
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+++ ++ D + K ++S + + E+AEA+++EME
Sbjct: 383 SVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEE 442
Query: 226 DNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ + ++ Y A+ K V + K C P + I + K+ K+ +
Sbjct: 443 EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A V + M + K + K Y+ ++ + K + + + M + G + ++ ++
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
G +++A + K Q+ + +P ++M I+ YAK GD+ + ++F MR+ G V
Sbjct: 563 AFCGMGNMDRAIQTV-KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 403 ARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQ 446
F L+ + K A I D M V N+ ++ Q
Sbjct: 622 PTVHTFNGLINGLVE-KRQAVEILDEMTLAGVSANEHTYTKIMQ 664
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y LL C ++ A V M + P SF N L+ + +R D + AD++ M
Sbjct: 693 TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQM 752
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+KE VK +Y I ++ D+ Q +E M++ G++P+ T L K +
Sbjct: 753 KKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLP 812
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLL 239
EKA + +EM+ +K + LL
Sbjct: 813 EKALSCYEEMKAMGIKPDKAVYHCLL 838
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 109/270 (40%), Gaps = 10/270 (3%)
Query: 68 DLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLA---NCVAGNNVKKAEEVFNRMKDK 122
++I+ G+ + IQ + E R RT + +++++ EVF+ M+
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
G T N L+ ++K++ ++L M V + +Y ++ D
Sbjct: 619 GCVPTVHTFNGLI--NGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAF 676
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+ +++EG++ D T L K GR + A A+ KEM N+ + + +L+ +
Sbjct: 677 EYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGW 736
Query: 243 AELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
A G + A + + + P + + I A K + A + M K +
Sbjct: 737 ARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNI 796
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESG 329
K YT L+K +A + K ++M G
Sbjct: 797 KTYTTLIKGWARASLPEKALSCYEEMKAMG 826
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
++ +G+ + A F+RM +++ YT+L+ YA + + + V++M E G
Sbjct: 316 VKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI 375
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + + +V + G E AD +A++ +K S Y I+ + + ++ E
Sbjct: 376 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA-SIYGKIIYAHCQTCNMERAE 434
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
+ M + G A + T++ Y
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGY 459
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 114/282 (40%), Gaps = 6/282 (2%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
+K +Y L+ + L +QV++ M G+ PD +T ++L Y GR E A
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 347
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAW 274
+LKEME D +K + +L + + G KA V R P I+ +
Sbjct: 348 ILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 407
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK N + A F RM + + + L+ + + +L +M ES C +G
Sbjct: 408 GKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGT 467
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
++ ++ L E E +++L + ++Q P +Y ++D Y + G
Sbjct: 468 TTYNIMINLLGEEQRWEGVEAMLAEMKEQG-LVPNIITYTTLVDVYGRSGRFKEAVDCIE 526
Query: 395 RMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNV 434
M+ G + LV AY A + MRAD +
Sbjct: 527 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGL 568
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 143/346 (41%), Gaps = 7/346 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L K+ L+ AE + ++ + E Y L+ + A +
Sbjct: 293 RAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 352
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G +S+ +++L ++ R + +K VL M V+ + Y ++ID G+ N
Sbjct: 353 MEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNC 412
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L + M+ EGIEPD T L + GGR ++A + EM N T +
Sbjct: 413 LGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNI 472
Query: 238 LLPLYAELGKADQV-ARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ L E + + V A + ++ E P + ++ +G+ + +EA + M
Sbjct: 473 MINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADG 532
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S Y AL+ YA + ++VK M G + ++L+ E + +A
Sbjct: 533 LKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAF 592
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
S+ L+ ++N +P +Y +M + I+ M G
Sbjct: 593 SV-LQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSG 637
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSY 165
N + A + F+RM+++G N L+ + + + + ++ M + N L +Y
Sbjct: 411 NCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTY 470
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 471 NIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKA 530
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEE 282
D LK L+ YA+ G AD + K ++ V + I A+G+ ++ E
Sbjct: 531 DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAE 590
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A +V + M + + YT L+K + K + ++M SGC
Sbjct: 591 AFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGC 638
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 240 PLYAELGKADQVARI----WKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
PL+++L A AR+ +L S P + A I + G +V EAEA+F
Sbjct: 222 PLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLE 281
Query: 290 MSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
+ K T+ Y ALLK Y L + ++ +M++ G + LV + G
Sbjct: 282 FFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 341
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYML--IMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
E A ILLK + + KP SSY+ I+ + RG+ + M G
Sbjct: 342 RWESA-RILLKEMEADGVKP--SSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRH 398
Query: 407 QFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
+ ++ + N A DRMR + + P+
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPD 431
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 114/282 (40%), Gaps = 6/282 (2%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
+K +Y L+ + L +QV++ M G+ PD +T ++L Y GR E A
Sbjct: 288 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 347
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAW 274
+LKEME D +K + +L + + G KA V R P I+ +
Sbjct: 348 ILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTF 407
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK N + A F RM + + + L+ + + +L +M ES C +G
Sbjct: 408 GKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGT 467
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
++ ++ L E E +++L + ++Q P +Y ++D Y + G
Sbjct: 468 TTYNIMINLLGEEQRWEGVEAMLAEMKEQG-LVPNIITYTTLVDVYGRSGRFKEAVDCIE 526
Query: 395 RMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNV 434
M+ G + LV AY A + MRAD +
Sbjct: 527 AMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGL 568
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 143/346 (41%), Gaps = 7/346 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L K+ L+ AE + ++ + E Y L+ + A +
Sbjct: 293 RAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 352
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G +S+ +++L ++ R + +K VL M V+ + Y ++ID G+ N
Sbjct: 353 MEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNC 412
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L + M+ EGIEPD T L + GGR ++A + EM N T +
Sbjct: 413 LGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNI 472
Query: 238 LLPLYAELGKADQV-ARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ L E + + V A + ++ E P + ++ +G+ + +EA + M
Sbjct: 473 MINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADG 532
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S Y AL+ YA + ++VK M G + ++L+ E + +A
Sbjct: 533 LKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAF 592
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
S+ L+ ++N +P +Y +M + I+ M G
Sbjct: 593 SV-LQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSG 637
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSY 165
N + A + F+RM+++G N L+ + + + + ++ M + N L +Y
Sbjct: 411 NCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTY 470
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 471 NIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKA 530
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEE 282
D LK L+ YA+ G AD + K ++ V + I A+G+ ++ E
Sbjct: 531 DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAE 590
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A +V + M + + YT L+K + K + ++M SGC
Sbjct: 591 AFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGC 638
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 240 PLYAELGKADQVARI----WKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
PL+++L A AR+ +L S P + A I + G +V EAEA+F
Sbjct: 222 PLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLE 281
Query: 290 MSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
+ K T+ Y ALLK Y L + ++ +M++ G + LV + G
Sbjct: 282 FFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 341
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYML--IMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
E A ILLK + + KP SSY+ I+ + RG+ + M G
Sbjct: 342 RWESA-RILLKEMEADGVKP--SSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRH 398
Query: 407 QFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
+ ++ + N A DRMR + + P+
Sbjct: 399 FYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPD 431
>gi|414864941|tpg|DAA43498.1| TPA: hypothetical protein ZEAMMB73_100357 [Zea mays]
Length = 788
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 186/448 (41%), Gaps = 35/448 (7%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLD----- 57
APD S + TL +G A L + ++ R + + +S ++ +KK
Sbjct: 168 APDNSTYGTLINVCCQGGREWTA--LLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETA 225
Query: 58 --FIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEV 115
F ER ++S D I ++ G Y Y TL+ +++K +
Sbjct: 226 EIFFER-WSS--DSIRRMEGRSHYNLY------------TYNTLIDTYGKAGHLEKVSDT 270
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQ 174
FN+M +G + N ++ + + + +KVA ++ +ME+ +Y ILI + +
Sbjct: 271 FNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTRTYNILIALYRE 330
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
S+D+ + MK+E + PD + L Y G KAEA+LKEM+ +T
Sbjct: 331 SDDIDIAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKAEALLKEMDERGFMVDEYT 390
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L +Y +G +Q R + + + A I+A+G+ + AE F K
Sbjct: 391 QSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIVLAEKAFVCCLKK- 449
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K +S ++K Y ML + ++ M + + +L++L + ++ K
Sbjct: 450 KMISVSACNVMIKAYGLVGMLDEACEIANGMERYDILPDYVTYTSLIQL-LSTAKLPKKA 508
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L+ + K Y +++ +AK GD+ +E +F M G + L+ A
Sbjct: 509 IYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDA 568
Query: 415 Y-----INAKTPAYGIRDRMRADNVFPN 437
Y + + +G+ M+ D ++ N
Sbjct: 569 YAEVGNVQQASAYFGL---MKKDGLYEN 593
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 122/297 (41%), Gaps = 16/297 (5%)
Query: 135 LILYKRLDKKKVADVLLLMEKE-NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
+IL ++ D ++ ++ +E +L Y ++++ G++ + ++ M S G+
Sbjct: 108 IILKEQKDWRRAVEIFDWFRREQGHELNVIHYNVVLNTVGKARRWDLVLRLWYEMHSFGV 167
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK------ 247
PD+ST L GGR+ A L +M L T +++ + + G+
Sbjct: 168 APDNSTYGTLINVCCQGGREWTALLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEI 227
Query: 248 ------ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
+D + R+ N L I+ +GK +E+ F +M S
Sbjct: 228 FFERWSSDSIRRMEGRSHYN--LYTYNTLIDTYGKAGHLEKVSDTFNQMLSEGVAPSVVT 285
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+ +++ + H + K LV+ M E C ++ L+ L+ E +++ A+ K +
Sbjct: 286 FNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTRTYNILIALYRESDDIDIAEYYYWKMK 345
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+N + S L+ Y+ RG + E + M + G++ L + Y+N
Sbjct: 346 TENLVPDVVSCRTLLYG-YSIRGMVTKAEALLKEMDERGFMVDEYTQSALTRMYVNV 401
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 4/203 (1%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y ++I ++ DL + + M G+ PD +IL Y G ++A A M+
Sbjct: 527 YSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMK 586
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVE 281
D L E+ L+ LY ++G + +KL +S N L I+ + V+
Sbjct: 587 KDGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSLDTNAILYASNCMIDLYSDHCMVK 646
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA VF + K + + ++ +Y + K+M G L++++++
Sbjct: 647 EACEVFDSL-KVRGIANEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGLLTQLLSYNSVI 705
Query: 342 KLHVEGGEVEKADSILLKAQQQN 364
+++V GG E+A I K N
Sbjct: 706 QMYVSGGRTEEALKIFKKMLASN 728
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 166/421 (39%), Gaps = 47/421 (11%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVV-YRTLLANCVAGNNVKKAEEVFNR 118
R Y + L + + AE Y K+ E+ +VV RTLL V KAE +
Sbjct: 319 RTYNILIALYRESDDIDIAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKAEALLKE 378
Query: 119 MKDKGFPVTSFACNQLLILY--------------------------KRLDKKKVADVLLL 152
M ++GF V + + L +Y +D ++L
Sbjct: 379 MDERGFMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIVL 438
Query: 153 MEKENV-----KLTQFS-YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
EK V K+ S ++I G L ++ M+ I PD T L +
Sbjct: 439 AEKAFVCCLKKKMISVSACNVMIKAYGLVGMLDEACEIANGMERYDILPDYVTYTSLIQL 498
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPW 263
+ +KA L++M+ L +++ +A+ G ++ + R + P
Sbjct: 499 LSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPD 558
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
+ V I+A+ ++ V++A A F M K + Y +L+K+Y + + + K
Sbjct: 559 IFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYENVTIYNSLIKLYTKVGYVPEARGAYK 618
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQ-QNKFKPMFSSYMLIMDQY 380
+ + A + ++ L+ + V++A + LK + N+F S+ +++ Y
Sbjct: 619 LLKSLDTNAILYASNCMIDLYSDHCMVKEACEVFDSLKVRGIANEF-----SHAMMVCMY 673
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNK 438
K G ++ M+ +G + + + +++Q Y++ A I +M A N PN
Sbjct: 674 KKVGRYDVAHRVCKEMQALGLLTQLLSYNSVIQMYVSGGRTEEALKIFKKMLASNTPPND 733
Query: 439 A 439
A
Sbjct: 734 A 734
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 133/309 (43%), Gaps = 12/309 (3%)
Query: 115 VFNRMKDKGFPVTSFACNQL---LILYKRLDKKKVADVLLLMEKE---NVKLTQFSYKIL 168
VF RM + G+ F+ N L L + K+ ++ ++LL M + N SY +
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKK--SQEALELLLHMTADGGYNCSPNVVSYSTI 209
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
ID + ++ + + M +G PD T + L KAEA+L+ M +
Sbjct: 210 IDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGV 269
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEA 285
+ T +++ Y LG+ ++ R+ K + P + + I+ + K+ + EA +
Sbjct: 270 MPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARS 329
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
VF M + +K ++ Y LL YA L +DL+ M G A++ L+ +
Sbjct: 330 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 389
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
+ G V+KA + + +QN +P SY ++ K G + F++M G
Sbjct: 390 KHGAVDKAMTAFTE-MRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNI 448
Query: 406 KQFQTLVQA 414
F +L+
Sbjct: 449 ISFTSLIHG 457
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 133/340 (39%), Gaps = 10/340 (2%)
Query: 84 QKIPESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD 142
+ I + F +VV Y +L+ + KAE + M DKG + N ++ Y L
Sbjct: 228 EMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLG 287
Query: 143 KKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
+ + A LL M ++ +Y +LI + V ++M +G +P+S+
Sbjct: 288 QLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYH 347
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLK-EHRWTCRLLLPLYAELGKADQVARIWKLCES 260
IL Y + G +L M D + EHR +L+ YA+ G D+ +
Sbjct: 348 ILLHGYATKGALIDVRDLLDLMIRDGIPFEHR-AFNILICAYAKHGAVDKAMTAFTEMRQ 406
Query: 261 N---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
N P + I K+ +VE+A F +M + +T+L+ K
Sbjct: 407 NGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKK 466
Query: 318 GKDLVKQMAESGCHIGPLAWDALV-KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
++L +M G H + + ++ L EG VE D KP SY +
Sbjct: 467 VEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQD--FFDMVIHIGVKPNVVSYNTL 524
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+D Y G + + K F RM +G + L+ Y
Sbjct: 525 IDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYF 564
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 138/343 (40%), Gaps = 41/343 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMK 120
Y++ + ++ K+ ++ A + Q + E ++ + +L+ + KK EE+ M
Sbjct: 416 YSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMI 475
Query: 121 DKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
++G + N ++ L K + D ++ VK SY LID +
Sbjct: 476 NRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMD 535
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ + M S G+ PDS T L Y GR E A A+ +EM ++K T ++L
Sbjct: 536 ESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIIL 595
Query: 240 PLYAELGK-----------------------------------ADQVARIWKLCESNPW- 263
+ G+ D+ R+++ S +
Sbjct: 596 HGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFE 655
Query: 264 LDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
LDV I A K+ +++EA+++F M Y+ ++K + +L + DL
Sbjct: 656 LDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDL 715
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
M ++GC + +++ +E G+V +A + L K ++N
Sbjct: 716 FLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKN 758
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 114/266 (42%), Gaps = 11/266 (4%)
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+NV L Q K L D G+ D MD V M G PD + L K + ++
Sbjct: 128 QNVTLNQL-IKGLCD--GKRTD-DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQE 183
Query: 216 AEAMLKEMEGD---NLKEHRWTCRLLLPLYAELGKADQVARIWK--LCESNPWLDVCMAA 270
A +L M D N + + ++ + + G+ D+ ++ + + P V ++
Sbjct: 184 ALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSS 243
Query: 271 -IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ K + +AEA+ + M +T+ Y +++ Y L + L+K+M+ SG
Sbjct: 244 LIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 303
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + L++ + + G +A S+ ++ + KP + Y +++ YA +G +
Sbjct: 304 LQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQ-KPNSTIYHILLHGYATKGALIDV 362
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
+ M + G + F L+ AY
Sbjct: 363 RDLLDLMIRDGIPFEHRAFNILICAY 388
>gi|414864940|tpg|DAA43497.1| TPA: hypothetical protein ZEAMMB73_100357 [Zea mays]
Length = 816
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 99/448 (22%), Positives = 186/448 (41%), Gaps = 35/448 (7%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLD----- 57
APD S + TL +G A L + ++ R + + +S ++ +KK
Sbjct: 168 APDNSTYGTLINVCCQGGREWTA--LLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETA 225
Query: 58 --FIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEV 115
F ER ++S D I ++ G Y Y TL+ +++K +
Sbjct: 226 EIFFER-WSS--DSIRRMEGRSHYNLY------------TYNTLIDTYGKAGHLEKVSDT 270
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQ 174
FN+M +G + N ++ + + + +KVA ++ +ME+ +Y ILI + +
Sbjct: 271 FNQMLSEGVAPSVVTFNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTRTYNILIALYRE 330
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
S+D+ + MK+E + PD + L Y G KAEA+LKEM+ +T
Sbjct: 331 SDDIDIAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKAEALLKEMDERGFMVDEYT 390
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L +Y +G +Q R + + + A I+A+G+ + AE F K
Sbjct: 391 QSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIVLAEKAFVCCLKK- 449
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K +S ++K Y ML + ++ M + + +L++L + ++ K
Sbjct: 450 KMISVSACNVMIKAYGLVGMLDEACEIANGMERYDILPDYVTYTSLIQL-LSTAKLPKKA 508
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L+ + K Y +++ +AK GD+ +E +F M G + L+ A
Sbjct: 509 IYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDA 568
Query: 415 Y-----INAKTPAYGIRDRMRADNVFPN 437
Y + + +G+ M+ D ++ N
Sbjct: 569 YAEVGNVQQASAYFGL---MKKDGLYEN 593
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 122/297 (41%), Gaps = 16/297 (5%)
Query: 135 LILYKRLDKKKVADVLLLMEKE-NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
+IL ++ D ++ ++ +E +L Y ++++ G++ + ++ M S G+
Sbjct: 108 IILKEQKDWRRAVEIFDWFRREQGHELNVIHYNVVLNTVGKARRWDLVLRLWYEMHSFGV 167
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK------ 247
PD+ST L GGR+ A L +M L T +++ + + G+
Sbjct: 168 APDNSTYGTLINVCCQGGREWTALLWLGDMCKRGLMPDEVTMSIVMQAHKKAGEYETAEI 227
Query: 248 ------ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
+D + R+ N L I+ +GK +E+ F +M S
Sbjct: 228 FFERWSSDSIRRMEGRSHYN--LYTYNTLIDTYGKAGHLEKVSDTFNQMLSEGVAPSVVT 285
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+ +++ + H + K LV+ M E C ++ L+ L+ E +++ A+ K +
Sbjct: 286 FNSMIHAWGKHHRMEKVASLVRMMEEFQCFPDTRTYNILIALYRESDDIDIAEYYYWKMK 345
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+N + S L+ Y+ RG + E + M + G++ L + Y+N
Sbjct: 346 TENLVPDVVSCRTLLYG-YSIRGMVTKAEALLKEMDERGFMVDEYTQSALTRMYVNV 401
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 4/203 (1%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y ++I ++ DL + + M G+ PD +IL Y G ++A A M+
Sbjct: 527 YSVVISSFAKNGDLRMSEYLFREMIMSGVRPDIFVYSILIDAYAEVGNVQQASAYFGLMK 586
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVE 281
D L E+ L+ LY ++G + +KL +S N L I+ + V+
Sbjct: 587 KDGLYENVTIYNSLIKLYTKVGYVPEARGAYKLLKSLDTNAILYASNCMIDLYSDHCMVK 646
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA VF + K + + ++ +Y + K+M G L++++++
Sbjct: 647 EACEVFDSL-KVRGIANEFSHAMMVCMYKKVGRYDVAHRVCKEMQALGLLTQLLSYNSVI 705
Query: 342 KLHVEGGEVEKADSILLKAQQQN 364
+++V GG E+A I K N
Sbjct: 706 QMYVSGGRTEEALKIFKKMLASN 728
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 166/421 (39%), Gaps = 47/421 (11%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVV-YRTLLANCVAGNNVKKAEEVFNR 118
R Y + L + + AE Y K+ E+ +VV RTLL V KAE +
Sbjct: 319 RTYNILIALYRESDDIDIAEYYYWKMKTENLVPDVVSCRTLLYGYSIRGMVTKAEALLKE 378
Query: 119 MKDKGFPVTSFACNQLLILY--------------------------KRLDKKKVADVLLL 152
M ++GF V + + L +Y +D ++L
Sbjct: 379 MDERGFMVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIVL 438
Query: 153 MEKENV-----KLTQFS-YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
EK V K+ S ++I G L ++ M+ I PD T L +
Sbjct: 439 AEKAFVCCLKKKMISVSACNVMIKAYGLVGMLDEACEIANGMERYDILPDYVTYTSLIQL 498
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPW 263
+ +KA L++M+ L +++ +A+ G ++ + R + P
Sbjct: 499 LSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKNGDLRMSEYLFREMIMSGVRPD 558
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
+ V I+A+ ++ V++A A F M K + Y +L+K+Y + + + K
Sbjct: 559 IFVYSILIDAYAEVGNVQQASAYFGLMKKDGLYENVTIYNSLIKLYTKVGYVPEARGAYK 618
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQ-QNKFKPMFSSYMLIMDQY 380
+ + A + ++ L+ + V++A + LK + N+F S+ +++ Y
Sbjct: 619 LLKSLDTNAILYASNCMIDLYSDHCMVKEACEVFDSLKVRGIANEF-----SHAMMVCMY 673
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNK 438
K G ++ M+ +G + + + +++Q Y++ A I +M A N PN
Sbjct: 674 KKVGRYDVAHRVCKEMQALGLLTQLLSYNSVIQMYVSGGRTEEALKIFKKMLASNTPPND 733
Query: 439 A 439
A
Sbjct: 734 A 734
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 11/313 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y L+ V ++A +V+ M G T + L++ + KR D + V +L M
Sbjct: 173 TYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEM 232
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E V+ +SY I I + GQ+ L +++ M+ EG +PD T +L + GR
Sbjct: 233 EARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRL 292
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AA 270
A+ + +M+ + K R T LL + G + V+ IW +++ + D + AA
Sbjct: 293 ADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAA 352
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
++A ++ +V+EA VF M + Y +L+ + ++ +L M G
Sbjct: 353 VDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGP 412
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK---PMFSSYMLIMDQYAKRGDIH 387
+ H + GE KA LK + K K P + ++ AK G +
Sbjct: 413 TPNGYTHVLFINYHGKSGESLKA----LKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLG 468
Query: 388 STEKIFHRMRQVG 400
+++FH ++ +G
Sbjct: 469 MAKRVFHELKAMG 481
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 130/357 (36%), Gaps = 42/357 (11%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y L+ V + + AEE+F+ MK G F + LIL ++ D+L +
Sbjct: 769 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYH--LILDAMGKSMRIEDMLKIQEE 826
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + K T +Y +I +S L + + SEG P T L + G
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAI 271
E AEA+ EM E G CE N + ++ +
Sbjct: 887 IEDAEALFDEM-------------------LECG-----------CEPNCAIYNILLNGY 916
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
G KV E +F+ M + K YT ++ L+ G KQ+ + G
Sbjct: 917 RIAGDTEKVCE---LFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE 973
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ ++ L+ + G +E+A S L ++ P +Y ++ K G K
Sbjct: 974 PDLITYNLLIHGLGKSGRLEEALS-LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGK 1032
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
++ + G+ + L++ Y + +P A+ RM PN + Q+
Sbjct: 1033 MYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 11/276 (3%)
Query: 41 GKALQLSEWLET-----NKKLDFIERDYASCLDLIAKLRGLQKAES-YIQKIPESFRG-E 93
GK++++ + L+ NK Y + + + K + L +A + Y Q + E F
Sbjct: 812 GKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTP 871
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
Y LL + N++ AE +F+ M + G N LL Y+ D +KV ++
Sbjct: 872 CTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFES 931
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M ++ + SY ++ID L + + G+EPD T +L GR
Sbjct: 932 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGR 991
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMA 269
E+A ++ +ME + + +T L+ + GKA + ++++ + W + A
Sbjct: 992 LEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNA 1051
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
I + E A A + RM + ++ Y L
Sbjct: 1052 LIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 131/339 (38%), Gaps = 51/339 (15%)
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVK 159
A C G V +A +VF+ MK KG ++ N L+ + + D+ + ++ M
Sbjct: 355 ALCQVGR-VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPT 413
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
+++ + I+ G+S + + E MKS+GI PD + GR A+ +
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGK 276
E++ + T +++ ++ AD+ +I+ ++ E+ DV + I+ K
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+ EA +F + + + + Y LL + +GK VK++ +
Sbjct: 534 AGRGNEAWKIFYELKEMNLEPTDCTYNTLLA-----GLGREGK--VKEVMQ--------- 577
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
LL+ N F P +Y ++D K G+++ + + M
Sbjct: 578 --------------------LLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617
Query: 397 RQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVF 435
G + + T++ YG+ R D F
Sbjct: 618 TMNGCMPDLSSYNTVM----------YGLVKEDRLDEAF 646
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/366 (18%), Positives = 140/366 (38%), Gaps = 42/366 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
+ Y ++ C +N +A ++F M + A N L+ +LYK + +
Sbjct: 487 ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYE 546
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+++ N++ T +Y L+ G+ + + Q++E M S P+ T + G
Sbjct: 547 LKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGE 606
Query: 213 KEKAEAMLKEM--------------------EGDNLKEHRWT-CRL-------------L 238
A ML M + D L E W C++ +
Sbjct: 607 VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTI 666
Query: 239 LPLYAELG---KADQVARIWKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LP + G +A R + L + + +D + +E K + E++ + ++ +
Sbjct: 667 LPSFVRSGLMKEALHTVREYIL-QPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASS 725
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
L + +++ HK +LVK+ G + +++AL+ V+ ++ A
Sbjct: 726 GLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIA 785
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ L ++ P +Y LI+D K I KI M GY + + + T++
Sbjct: 786 EE-LFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 844
Query: 414 AYINAK 419
+ +K
Sbjct: 845 GLVKSK 850
>gi|449457725|ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 227
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 96/188 (51%), Gaps = 3/188 (1%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P+IS+ L ++ EG + + E+ + LR + + AL++S+W+ + D
Sbjct: 41 PNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADI 100
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNN-VKKAEEVFNRMKDK 122
A ++LI ++ GL++ E Y +P + V+ LL NC A V KA ++K+
Sbjct: 101 AIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALL-NCYAHEKCVDKANAFMQKIKEM 159
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGM 181
GF + N ++ LY ++ + + D LL M++ V +F+Y I I ++D G+
Sbjct: 160 GFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGI 219
Query: 182 DQVVEAMK 189
++++E M+
Sbjct: 220 EKIMEQME 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
+++ +E+ E F M K+ + ALL YA K + K ++++ E G PL
Sbjct: 109 RVHGLEQVEDYFDNMPSQLKRYQV--HIALLNCYAHEKCVDKANAFMQKIKEMGFANSPL 166
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
++ ++ L+ + GE E+ DS+L + +++ + F +Y + + YA D EKI +
Sbjct: 167 PYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRF-TYSIRISAYAAASDFRGIEKIMEQ 225
Query: 396 M 396
M
Sbjct: 226 M 226
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 139/321 (43%), Gaps = 10/321 (3%)
Query: 88 ESFRGEVVYRTLLANCVAGNNVKKAEEVFNR---MKDKGFPVTSFACNQLLILYKRLDK- 143
+ + +VV T+L + + V K +E F MK +G N L+ RL++
Sbjct: 361 DGYLPDVVTFTILIDALC--KVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRL 418
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+ ++ ME ++ T ++Y + ID G+S + + E MK+ GI P+
Sbjct: 419 DEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNAS 478
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-- 261
GR E+A+ ++ L T +L+ Y + G+ D ++ E N
Sbjct: 479 LYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGC 538
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P + + + I+ K ++V+EA +F+RM + + Y LL + +
Sbjct: 539 DPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATA 598
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L K M C ++++ L+ + GEV+ A +L + + N F P +Y ++
Sbjct: 599 LFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF-PDVLTYNTVIYGL 657
Query: 381 AKRGDIHSTEKIFHRMRQVGY 401
K ++ +FH+M++V Y
Sbjct: 658 IKENRVNYAFWLFHQMKKVIY 678
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 104/236 (44%), Gaps = 7/236 (2%)
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PW 263
Y+ GG +E A L++M + ++ L+ L + G + ++++ S P
Sbjct: 168 YIRGGLRE-APVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPS 226
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
L A + A GK +E + + M + + +T +++ + + ++K
Sbjct: 227 LKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILK 286
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
+M ++GC + + L+ G++ A + LK + + KP +Y+ ++D+++
Sbjct: 287 RMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH-KPDRVTYITLLDKFSDH 345
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
GD+ + ++ + M GY+ F L+ A + A+G D M+ V PN
Sbjct: 346 GDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPN 401
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 154/378 (40%), Gaps = 26/378 (6%)
Query: 77 QKAESYIQKIPESFRGEVVYRTLLANCV-----AGNNVKKAEEVFNRMKDKGFPVTSFAC 131
+A S+ + E R V++ T N V A V+ VFN M+ + + +
Sbjct: 103 NQAFSFFNSVAEMPR--VIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQ---IIKRSI 157
Query: 132 NQLL----ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
N L +LY R ++ L M K L +SY LI + +S +V
Sbjct: 158 NTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRR 217
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAE---AMLKEMEGDNLKEHRWTCRLLLPLYAE 244
M SEGI+P T + L V+ G++ E +L+EME L+ + +T + + +
Sbjct: 218 MVSEGIKPSLKTYSALM---VALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGR 274
Query: 245 LGKADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
GK D+ I K + P + I+A K+ A+ +F +M + K
Sbjct: 275 AGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVT 334
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y LL ++DH L K+ +M G + + L+ + G+V++A L +
Sbjct: 335 YITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMK 394
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+Q P +Y ++ + + ++F+ M +G + + Y +
Sbjct: 395 KQG-VAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGES 453
Query: 422 AYGIR--DRMRADNVFPN 437
I+ ++M+ + + PN
Sbjct: 454 GKAIKTFEKMKTNGIVPN 471
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 117/295 (39%), Gaps = 18/295 (6%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
F+Y + +D G+S + + + E M G +P++ T I+ V +KA + +
Sbjct: 824 FTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYD 883
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-----LCESN-PWLDVCMAAIEAWGK 276
+ + WT L+ +LG+ ++ + ++ C N P ++ M +GK
Sbjct: 884 LMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILM---NGFGK 940
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE---SGCHIG 333
VE A +F+RM K + K Y+ ++ M+ K D + E SG
Sbjct: 941 QGDVETACELFRRMVKEGIRPDLKSYSIMVDCLC---MVGKVDDALHYFEELKLSGLDPD 997
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+ ++ ++ VE+A S L + P +Y ++ G + K++
Sbjct: 998 LVCYNLMINGLGRSQRVEEALS-LFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMY 1056
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
++ G + L++ + + P AY + +M PN AQ+
Sbjct: 1057 EELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 145/379 (38%), Gaps = 75/379 (19%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
++A +V+ RM +G + + L++ L KR D + V +L ME ++ +++ I
Sbjct: 209 REALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTIC 268
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I I G++ + +++ M G PD T +L + G+ A+ + +M+ +
Sbjct: 269 IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH 328
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAI------------EAWG 275
K R T LL +++ G D + W E++ +L DV I EA+G
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFG 388
Query: 276 -------------------------KLNKVEEAEAVFKRMS------------------- 291
+LN+++EA +F M
Sbjct: 389 TLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYG 448
Query: 292 ---------KTWKKLSTKHYT-------ALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
KT++K+ T A L A+ L + K+ + + G +
Sbjct: 449 KSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAI 508
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
++ L++ + + G V+ A LL ++N P ++D K + K+F R
Sbjct: 509 TYNILMRCYGKAGRVDDAIK-LLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQR 567
Query: 396 MRQVGYVARFKQFQTLVQA 414
M+++ + TL+
Sbjct: 568 MKEMKLAPTVVTYNTLLAG 586
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 136/313 (43%), Gaps = 11/313 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y L+ V ++A +V+ M G T + L++ + KR D + V +L M
Sbjct: 173 TYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEM 232
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E V+ +SY I I + GQ+ L +++ M+ EG +PD T +L + GR
Sbjct: 233 EARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRL 292
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AA 270
A+ + +M+ + K R T LL + G + V+ IW +++ + D + AA
Sbjct: 293 ADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAA 352
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
++A ++ +V+EA VF M + Y +L+ + ++ +L M G
Sbjct: 353 VDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGP 412
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK---PMFSSYMLIMDQYAKRGDIH 387
+ H + GE KA LK + K K P + ++ AK G +
Sbjct: 413 TPNGYTHVLFINYHGKSGESLKA----LKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLG 468
Query: 388 STEKIFHRMRQVG 400
+++FH ++ +G
Sbjct: 469 MAKRVFHELKAMG 481
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 130/357 (36%), Gaps = 42/357 (11%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y L+ V + + AEE+F+ MK G F + LIL ++ D+L +
Sbjct: 769 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYH--LILDAMGKSMRIEDMLKIQEE 826
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + K T +Y +I +S L + + SEG P T L + G
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAI 271
E AEA+ EM E G CE N + ++ +
Sbjct: 887 IEDAEALFDEM-------------------LECG-----------CEPNCAIYNILLNGY 916
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
G KV E +F+ M + K YT ++ L+ G KQ+ + G
Sbjct: 917 RIAGDTEKVCE---LFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLE 973
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ ++ L+ + G +E+A S L ++ P +Y ++ K G K
Sbjct: 974 PDLITYNLLIHGLGKSGRLEEALS-LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGK 1032
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
++ + G+ + L++ Y + +P A+ RM PN + Q+
Sbjct: 1033 MYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPN 1089
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 11/276 (3%)
Query: 41 GKALQLSEWLET-----NKKLDFIERDYASCLDLIAKLRGLQKAES-YIQKIPESFRG-E 93
GK++++ + L+ NK Y + + + K + L +A + Y Q + E F
Sbjct: 812 GKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTP 871
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
Y LL + N++ AE +F+ M + G N LL Y+ D +KV ++
Sbjct: 872 CTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFES 931
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M ++ + SY ++ID L + + G+EPD T +L GR
Sbjct: 932 MVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGR 991
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMA 269
E+A ++ +ME + + +T L+ + GKA + ++++ + W + A
Sbjct: 992 LEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNA 1051
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
I + E A A + RM + ++ Y L
Sbjct: 1052 LIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 131/339 (38%), Gaps = 51/339 (15%)
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVK 159
A C G V +A +VF+ MK KG ++ N L+ + + D+ + ++ M
Sbjct: 355 ALCQVGR-VDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPT 413
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
+++ + I+ G+S + + E MKS+GI PD + GR A+ +
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRV 473
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGK 276
E++ + T +++ ++ AD+ +I+ ++ E+ DV + I+ K
Sbjct: 474 FHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYK 533
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+ EA +F + + + + Y LL + +GK VK++ +
Sbjct: 534 AGRGNEAWKIFYELKEMNLEPTDCTYNTLLA-----GLGREGK--VKEVMQ--------- 577
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
LL+ N F P +Y ++D K G+++ + + M
Sbjct: 578 --------------------LLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSM 617
Query: 397 RQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVF 435
G + + T++ YG+ R D F
Sbjct: 618 TMNGCMPDLSSYNTVM----------YGLVKEGRLDEAF 646
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 132/316 (41%), Gaps = 9/316 (2%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKIL 168
+A ++F +K+ T N LL R K K+V +L M + +Y +
Sbjct: 538 NEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTV 597
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+D ++ ++ ++ +M G PD S+ + V GR ++A M +M+
Sbjct: 598 LDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLA 657
Query: 229 KEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLD--VCMAAIEAWGKLNKVEEA 283
++ C +L P + G +A R + L + + +D + +E K + E++
Sbjct: 658 PDYATVCTIL-PSFVRSGLMKEALHTVREYIL-QPDSKVDRSSVHSLMEGILKRDGTEKS 715
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+ ++ + L + +++ + HK +LVK+ G + +++AL+
Sbjct: 716 IEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICG 775
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
V+ ++ A+ L ++ P +Y LI+D K I KI M GY +
Sbjct: 776 LVDEDLIDIAEE-LFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKS 834
Query: 404 RFKQFQTLVQAYINAK 419
+ + T++ + +K
Sbjct: 835 TYVTYNTIISGLVKSK 850
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 144/352 (40%), Gaps = 9/352 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLL 152
V Y ++ + KA +FN M G ++ N L+ Y K D K ++L
Sbjct: 382 VTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAE 441
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ + + F+Y +LI S+DL ++V++ M G++P+ L K YV R
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMA 269
E A +LK M + + + L+ K ++ + + E P A
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I + K +++ AE FK M + + YT L+K + D + K M E G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
A+ A++ + G+ ++A + LK + +F Y ++ + K GDI
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF-LYNSLISGFCKEGDIEKA 680
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAK----TPAYGIRDRMRADNVFPN 437
+++ M G + TL+ Y K T A+ + D M + + P+
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPD 732
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 151/394 (38%), Gaps = 49/394 (12%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
P F Y L++ ++++KA EV ++M G F L+ Y + + ++
Sbjct: 449 PSPF----TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEM 504
Query: 147 A-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
A ++L +M V F Y LI ++ + ++ M +GI+P++ T
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN--P 262
Y G + AE K+M + + +L+ + ++G + +K + E P
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
+ A I + K K +EA VF + KT Y +L+ + + K L
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLY 684
Query: 323 KQMAESGCHIGPLAWDALVK---------------------------------LHVEG-- 347
+M +G + + ++ L+ + ++G
Sbjct: 685 DEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCG 744
Query: 348 --GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
G +EKA S+ +AQQ++ S++ ++D + K G + ++F M
Sbjct: 745 KEGNLEKALSLFHEAQQKSVGS--LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 802
Query: 406 KQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
+ L+ AY A+ A + M N+ PN
Sbjct: 803 VTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 836
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 129/327 (39%), Gaps = 5/327 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LME 154
Y + V +A EV M +KG L+ + + + K A ++ M
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ +F+Y LID + ++ ++ + M + G++ + T + G
Sbjct: 339 SSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMA 398
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAI 271
KA ++ EM ++ WT LL+ Y ++ KA ++ K + P I
Sbjct: 399 KAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ +++A V +M + K + Y L+K Y +L+K M +G
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
++ L+ +VE+A +L+ ++ KP +Y ++ Y+K G+I E+
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG-IKPNAHTYGAFINLYSKSGEIQVAER 577
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINA 418
F M G V + L++ + +
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDV 604
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 112/291 (38%), Gaps = 36/291 (12%)
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
VL MEKE K F+Y I Q+ + +V + M +G+ PD T +L +
Sbjct: 264 VLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFC 322
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM 268
R ++A+ + + M L +R+T Y
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRFT-------YT------------------------- 350
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I+ + K +EEA + M KL+ Y A++ A ++K L +M +
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G ++ L+ +++ ++ KA LL + K P +Y +++ D+
Sbjct: 411 GIEPDTWTYNLLIDGYLKSHDMAKACE-LLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
++ +M + G + TL++AY+ I M A+ V P+
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 133/345 (38%), Gaps = 52/345 (15%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLL-ANCVAGNNVKKAEEVFNRM 119
Y + ++L +K +Q AE Y + + S V+Y L+ +C GN V+ A F M
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE-ALSTFKCM 617
Query: 120 KDKGF-P--------VTSFACN-----QLLILYKRLDKKKVADVLLL------------- 152
+KG P + S + N + + K L V DV L
Sbjct: 618 LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677
Query: 153 ---------MEKENVKLTQFSYKILIDIKG--QSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
M + Y LI+ G +S +LT ++ + M S+GI PD
Sbjct: 678 EKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYC 737
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW------ 255
IL G EKA ++ E + ++ L+ + + GK + ++
Sbjct: 738 ILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDK 796
Query: 256 KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
KL P + I+A+GK +EEAE +F M +T YT+LL Y
Sbjct: 797 KL---TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNR 853
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
K L K M G +A+ + + + G+ +A +L K+
Sbjct: 854 FKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 898
>gi|242042129|ref|XP_002468459.1| hypothetical protein SORBIDRAFT_01g046280 [Sorghum bicolor]
gi|241922313|gb|EER95457.1| hypothetical protein SORBIDRAFT_01g046280 [Sorghum bicolor]
Length = 790
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 177/422 (41%), Gaps = 29/422 (6%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALA-MANLRTRRMYGKALQLSEWLETNKKLD---- 57
APD S + TL +G R +AL + ++ R + + ++ ++ +KK
Sbjct: 170 APDNSTYGTLINVCCQGG---RESVALLWLGDMCKRGLMPDEVTMNIVMQAHKKAGEYET 226
Query: 58 ---FIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEE 114
F ER ++S D I ++ G Y Y TL+ +++K +
Sbjct: 227 AGLFFER-WSS--DSIRRMEGSSHYSLY------------TYNTLIDTYGKAGHLEKVSD 271
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKG 173
FN+M +G + N ++ ++ + + ++VA ++ +ME+ +Y ILI +
Sbjct: 272 TFNQMLREGVAPSVVTFNSMIHVWGKHHRMEQVASLVRMMEEFQCFPDTRTYNILIALYR 331
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
+SND+ + MK E + PD + L Y G KAEA+LKEM+ +
Sbjct: 332 ESNDIDIAEYYYCKMKGENLVPDVVSCRTLLYGYSIRGMVTKAEALLKEMDERGFVVDEY 391
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
T L +Y +G +Q R + + + A I+A+G+ + AE F K
Sbjct: 392 TQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIVLAEKAFIYCIKK 451
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K LS ++K Y + L + ++ M G + + +L++L + ++ K
Sbjct: 452 -KMLSVSACNVMIKAYGLVEKLDEACEIADGMERYGILPDYVTYASLIQL-LSTAKLPKK 509
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
L+ + K Y +++ +AK GD+ E +F M G + L+
Sbjct: 510 AIYYLEKMKVVKLLSDCIPYSVVISSFAKIGDLRMAEYLFREMVMSGVRPDVFVYSILID 569
Query: 414 AY 415
AY
Sbjct: 570 AY 571
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 15/272 (5%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+L Y +++ G++ + ++ M S G+ PD+ST L GGR+ A
Sbjct: 135 ELNVIHYNVMLYTVGKARRWDLVLRLWHEMHSFGVAPDNSTYGTLINVCCQGGRESVALL 194
Query: 219 MLKEMEGDNLKEHRWTCRLLLP------------LYAELGKADQVARIWKLCESNPWLDV 266
L +M L T +++ L+ E +D + R+ S+ L
Sbjct: 195 WLGDMCKRGLMPDEVTMNIVMQAHKKAGEYETAGLFFERWSSDSIRRMEG--SSHYSLYT 252
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
I+ +GK +E+ F +M + S + +++ V+ H + + LV+ M
Sbjct: 253 YNTLIDTYGKAGHLEKVSDTFNQMLREGVAPSVVTFNSMIHVWGKHHRMEQVASLVRMME 312
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
E C ++ L+ L+ E +++ A+ K + +N + S L+ Y+ RG +
Sbjct: 313 EFQCFPDTRTYNILIALYRESNDIDIAEYYYCKMKGENLVPDVVSCRTLLYG-YSIRGMV 371
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
E + M + G+V L + Y+N
Sbjct: 372 TKAEALLKEMDERGFVVDEYTQSALTRMYVNV 403
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 171/421 (40%), Gaps = 47/421 (11%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIP-ESFRGEVV-YRTLLANCVAGNNVKKAEEVFNR 118
R Y + L + + AE Y K+ E+ +VV RTLL V KAE +
Sbjct: 321 RTYNILIALYRESNDIDIAEYYYCKMKGENLVPDVVSCRTLLYGYSIRGMVTKAEALLKE 380
Query: 119 MKDKGFPVTSFACNQLLILY--------------------------KRLDKKKVADVLLL 152
M ++GF V + + L +Y +D ++L
Sbjct: 381 MDERGFVVDEYTQSALTRMYVNVGMLEQAWRWFDRFHHHMNSECFSANIDAFGEKGYIVL 440
Query: 153 MEKENV------KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
EK + L+ + ++I G L ++ + M+ GI PD T A L +
Sbjct: 441 AEKAFIYCIKKKMLSVSACNVMIKAYGLVEKLDEACEIADGMERYGILPDYVTYASLIQL 500
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPW 263
+ +KA L++M+ L +++ +A++G A+ + R + P
Sbjct: 501 LSTAKLPKKAIYYLEKMKVVKLLSDCIPYSVVISSFAKIGDLRMAEYLFREMVMSGVRPD 560
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
+ V I+A+ ++ V++A A F M K + Y +L+K+Y +++ ++ K
Sbjct: 561 VFVYSILIDAYAEVGNVQQASAYFGLMKKDGLCENVTIYNSLIKLYTKVGYVAEARETYK 620
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQ-QNKFKPMFSSYMLIMDQY 380
+ + A + ++ L+ + V++A + LK + N+F S+ +++ Y
Sbjct: 621 LLKSLDANAILYASNCMIDLYSDHCMVKEACEVFEGLKVRGIANEF-----SHAMMVCMY 675
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNK 438
K G +I M+ +G + + + +++Q Y + A I +M A N PN
Sbjct: 676 KKVGRYDVAHRICKEMQALGLLTQLLSYNSVIQMYASGGRMEEALKIFKKMLASNTAPND 735
Query: 439 A 439
A
Sbjct: 736 A 736
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 115/289 (39%), Gaps = 12/289 (4%)
Query: 130 ACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM 188
ACN ++ Y ++K + ++ ME+ + +Y LI + + +E M
Sbjct: 458 ACNVMIKAYGLVEKLDEACEIADGMERYGILPDYVTYASLIQLLSTAKLPKKAIYYLEKM 517
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
K + D +++ + G AE + +EM ++ + +L+ YAE+G
Sbjct: 518 KVVKLLSDCIPYSVVISSFAKIGDLRMAEYLFREMVMSGVRPDVFVYSILIDAYAEVGNV 577
Query: 249 DQVARIW------KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
Q + + LCE+ + + + I+ + K+ V EA +K +
Sbjct: 578 QQASAYFGLMKKDGLCEN---VTIYNSLIKLYTKVGYVAEARETYKLLKSLDANAILYAS 634
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
++ +Y+DH M+ + ++ + + G + +V ++ + G + A I + Q
Sbjct: 635 NCMIDLYSDHCMVKEACEVFEGLKVRGI-ANEFSHAMMVCMYKKVGRYDVAHRICKEMQA 693
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+ SY ++ YA G + KIF +M FQ L
Sbjct: 694 LGLLTQLL-SYNSVIQMYASGGRMEEALKIFKKMLASNTAPNDATFQAL 741
>gi|115436130|ref|NP_001042823.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|57899055|dbj|BAD87829.1| putative DNA-binding protein [Oryza sativa Japonica Group]
gi|113532354|dbj|BAF04737.1| Os01g0301500 [Oryza sativa Japonica Group]
gi|222618277|gb|EEE54409.1| hypothetical protein OsJ_01440 [Oryza sativa Japonica Group]
Length = 484
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 8/261 (3%)
Query: 3 APDISIHSTLTKYAEEGND--LSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
A + S+ L ++ EG + ++ A++A +L + AL+L +W+ K +
Sbjct: 57 AGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAHALELMDWMVNTKGMSMTY 116
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTL--LANCVAGNNV-KKAEEVFN 117
YA L+L+ + G++ AE Y IP SF + +RT L NC + +KA ++
Sbjct: 117 ARYALHLELLYSVYGIEAAEEYFSGIP-SFTRDQNHRTYGALLNCYCSAKMEEKATNIYR 175
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
RM + G P ++ N L+ LY L + KVA++ M++ NV+ + + IL+ N
Sbjct: 176 RMDELGIPSSTKLMNNLMGLYLELGQHSKVANLFDEMKERNVQPDELTCCILMRSHAAHN 235
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE-AMLKEMEGDNLKEHRWTC 235
+ + + M + S L Y++ G E+AE A ++ E R
Sbjct: 236 KIDTVKETFYNMSLLDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPF 295
Query: 236 RLLLPLYAELGKADQVARIWK 256
L+ +A +G V R+WK
Sbjct: 296 YFLMRQFASIGNLRGVNRVWK 316
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
+E AE F + + + + Y ALL Y KM K ++ ++M E G +
Sbjct: 132 IEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNN 191
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
L+ L++E G+ K ++ + +++N +P + ++M +A I + ++ F+ M +
Sbjct: 192 LMGLYLELGQHSKVANLFDEMKERN-VQPDELTCCILMRSHAAHNKIDTVKETFYNMSLL 250
Query: 400 GYVARFKQFQTLVQAYINA 418
++ F+TL Y+NA
Sbjct: 251 DVPKQWSIFRTLGSIYMNA 269
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 145/346 (41%), Gaps = 7/346 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L ++ L+ AE + ++ + E Y L+ + A +
Sbjct: 300 RAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G +S+ +++L ++ R D +K VL M+ V+ + Y ++ID G+ N
Sbjct: 360 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L + M+ E IEPD T L + GGR ++A + +EM N T +
Sbjct: 420 LGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNI 479
Query: 238 LLPLYAELGKADQV-ARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ L E + + V A + ++ E P + ++ +G+ + +EA + M
Sbjct: 480 MINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADG 539
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S Y AL+ YA + ++VK M G + L ++L+ E V +A
Sbjct: 540 LKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAF 599
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
S+ L+ ++N +P +Y +M + I+ M G
Sbjct: 600 SV-LQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 644
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 4/261 (1%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
+K +Y L+ + L +QV++ M G+ PD +T ++L Y GR E A
Sbjct: 295 IKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAW 274
+LKEME D +K + +L + + G KA V R + P I+ +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK N + A F RM + + + L+ + + +L ++M ES C G
Sbjct: 415 GKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGT 474
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
++ ++ L E E +++L + ++Q P +Y ++D Y + G
Sbjct: 475 TTYNIMINLLGEQERWEGVEAMLSEMKEQG-LVPNIITYTTLVDVYGRSGRYKEAIDCIE 533
Query: 395 RMRQVGYVARFKQFQTLVQAY 415
M+ G + LV AY
Sbjct: 534 AMKADGLKPSPTMYHALVNAY 554
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 6/229 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSY 165
N + A + F+RM+++ N L+ + + + + ++ M + N +Y
Sbjct: 418 NCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTY 477
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 478 NIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKA 537
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM----AAIEAWGKLNKVE 281
D LK L+ YA+ G AD + K +++ L+V + + I A+G+ +V
Sbjct: 538 DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKAD-GLEVSILVLNSLINAFGEDRRVV 596
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
EA +V + M + + YT L+K + K + ++M SGC
Sbjct: 597 EAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGC 645
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGK 319
P + A I A G +V EAEA+F + K T+ Y ALLK Y L +
Sbjct: 260 TPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAE 319
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML--IM 377
++ +M++ G + LV + G E A ILLK + + KP SSY+ I+
Sbjct: 320 QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA-RILLKEMEADGVKP--SSYVFSRIL 376
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVF 435
+ RGD + M+ G + ++ + N A DRMR + +
Sbjct: 377 AGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEEIE 436
Query: 436 PN 437
P+
Sbjct: 437 PD 438
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 103/272 (37%), Gaps = 40/272 (14%)
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE-MEGDNLKEHRWTCRLLLPL 241
+++ + ++ G+ P S+ L S GR +AEA+ E +K LL
Sbjct: 249 ELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKG 308
Query: 242 YAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
Y +G A+QV C P ++A+ + + E A + K M K S
Sbjct: 309 YVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPS 368
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCH--------------------------- 331
+ ++ +L + D K ++++M SG
Sbjct: 369 SYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFD 428
Query: 332 ------IGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
I P + W+ L+ H +GG ++A + + ++ N P ++Y ++++ ++
Sbjct: 429 RMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESN-CPPGTTTYNIMINLLGEQ 487
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
E + M++ G V + TLV Y
Sbjct: 488 ERWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
A AL+ G V +A+++ L+ + KP +Y ++ Y + G + + E++
Sbjct: 265 AVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDE 324
Query: 396 MRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQV 444
M Q G + LV AY A A + M AD V P+ + +++
Sbjct: 325 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRI 375
>gi|356565994|ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 93/165 (56%), Gaps = 4/165 (2%)
Query: 26 EIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK 85
E+ + L R++Y AL+LSE + + + RD+A LDL+AK RG+ A++Y
Sbjct: 66 EVNDTLKKLDDRKLYQLALKLSETMAKRNMIKTV-RDHAIHLDLLAKARGITAAKNYFVN 124
Query: 86 IPESFRGEVVYRTLLANCVAGNN-VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK- 143
+PES + + + +L NC ++KAE +MK+ P++S N L++LY ++ +
Sbjct: 125 LPESAKNHLCHGAIL-NCYCKEPMIEKAEGFMEKMKELSLPLSSMPYNSLIMLYTKVGQP 183
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM 188
+KV+ ++ M+ N+ L ++Y + + ND++ +++V + M
Sbjct: 184 EKVSSLIQEMKTSNIMLDSYTYNVWMRALAAVNDISSVERVHDEM 228
>gi|302779738|ref|XP_002971644.1| hypothetical protein SELMODRAFT_412145 [Selaginella moellendorffii]
gi|300160776|gb|EFJ27393.1| hypothetical protein SELMODRAFT_412145 [Selaginella moellendorffii]
Length = 1056
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 186/450 (41%), Gaps = 65/450 (14%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+ PDI L ++ EGN S + ++ L R+ Y + LQL + + +
Sbjct: 617 LSKPDI--FQGLKEWVREGNTFSSSLLSKVYYRLAKRKCYKEILQLLRGIREENMVQTTQ 674
Query: 61 RDYASCLDLIAKLRGLQKAESYIQK-IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
Y + + + + AE + IP FR E V L+ + N + K+E+ +M
Sbjct: 675 THYIWEMAITCRQQSTYAAEIFYNDIIPARFRSEEVTAALIFSLAKRNALAKSEKWIEQM 734
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+++ N L+ LY LD+ K VL
Sbjct: 735 T----VLSTDLLNMLMALY--LDRDKHDKVL----------------------------- 759
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILA--KHYVSGGR---KEKAEAMLKEMEGDNLKEHRWT 234
+ E M G+EP +T +L K GG + +AE +K ++ D R T
Sbjct: 760 ---ETYERMCKLGLEPSINTYLMLLTYKDKAGGGLEGIEREAEEAVKNIDLD--AALRKT 814
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVC-----MAAIEAWGKLNKVEEAEAVFKR 289
+ + + LGKA V IW +S C ++A+ A+G++ VE AE VF+
Sbjct: 815 LQETMEVCGYLGKAASVEDIWSRLKSLSGTQACDQSSYLSAMAAFGRVKNVERAEQVFEE 874
Query: 290 M--SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ K L+ H +++VY + +++K + +++ P +++LV+ ++
Sbjct: 875 LLAQDLSKSLANPH-AVMVEVYVSNGLMAKAEHVLRHRLNEAV-FSP--YNSLVRGYIAS 930
Query: 348 GEVEKADSIL---LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
G+ E A + L + A +P + + M ++ +A R DI E+I R +G
Sbjct: 931 GDTELALARLKEGVAAIPARHIRPAYKTMMALLPVFAARRDIDGAERIMFHYRFIGDATV 990
Query: 405 FKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
+ + L++ Y+ R+RM+ +V
Sbjct: 991 YNE---LLKVYVACNVFPLDFRNRMKGSDV 1017
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 193/463 (41%), Gaps = 69/463 (14%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
PD + K+ GN LS ++ L R+ Y + ++L E + + + F +
Sbjct: 125 PDT--FEAVKKWMRRGNCLSSDVLSTIYFWLMKRKRYTEIMKLLEGIRCERLVKFTDMHC 182
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG 123
+ +I++ RG+ KAE + +PE R + V L + N + KAE+ +++
Sbjct: 183 VWAIGVISRRRGMAKAERFYDSLPEKLRTDRVTVGLFLSVAKENGLAKAEQWLEKIQVH- 241
Query: 124 FPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
T+ + +++LY DK +K++ +
Sbjct: 242 ---TTDILDVMMVLYLNRDKH--------------------HKVV--------------E 264
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW---------T 234
+ E M+ G++P T +L K K++ L +EG+ L + T
Sbjct: 265 MFERMRGLGLQPSVRTYLMLLKC------KDRGAGGLNAIEGEALGAVQTMDVEDPPLRT 318
Query: 235 CRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM- 290
+ +Y +GK D + +W K S+ +AI A G + +V +A A+ K +
Sbjct: 319 LNDAMEVYGYVGKQDGIEELWRSLKRTRSDIHQSSYFSAITALGLVGEVAKARALCKELL 378
Query: 291 --SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
S + K + +L+VYA + M+ K + +++ P +++L++ ++
Sbjct: 379 AGSDEFTKFEQNPHALMLEVYARNGMMEKAERILQSKELDRDSFAP--YNSLIQGYMAAN 436
Query: 349 EVEKADSIL---LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
+ +A L L A + + + M+++ YA GD+ +++ R ++G +
Sbjct: 437 NISEALKKLDDGLAAVPAKSIRLQYKTMMVLLPVYAANGDVEGAKELMRRYTKLGDAGVY 496
Query: 406 KQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVD 448
+F ++ YI+ K +RM+A+ V N+ + ++D
Sbjct: 497 NEF---LKVYISRKRHPREFMERMQANGVEGNRETEKLLEELD 536
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 117/269 (43%), Gaps = 9/269 (3%)
Query: 91 RGE-VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP---VTSFACNQLLILYKRLDKKKV 146
RG V Y TL++ + NNV A E+F+ M D+G+P V F L RL
Sbjct: 309 RGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRL--VDA 366
Query: 147 ADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
++ M+K KL + +Y ILI + L Q+ E MK G++PD T L
Sbjct: 367 CNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSC 426
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCES--NPW 263
G + +L M D + T L+ Y + GK D+ +I++ + E+ P
Sbjct: 427 LCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPN 486
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
+ I+ K +V+ A +F M + + Y ALLK D M K +L+
Sbjct: 487 TVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMD 546
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEK 352
QM E C + D L++ E GE E+
Sbjct: 547 QMKEERCTPDYVTMDVLMEWLPEIGETER 575
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 162/428 (37%), Gaps = 65/428 (15%)
Query: 65 SCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRMKDK 122
S L LRG+ + + +++ S + ++V +L N C AG V A +V +RM
Sbjct: 139 SALGRAGNLRGMTELFTSMRE--ASVKPDIVTYGILLNRLCKAGL-VGDALKVLDRMSSP 195
Query: 123 GFPVTSFACNQLLILYKRLDK----KKVADVLLLMEK-----ENVKLTQFSYKILIDIKG 173
G S C ++IL +D ++ D ++ +++ +Y L D
Sbjct: 196 G----SDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACC 251
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE--- 230
+ D+ Q+VE M+ EG+ P+ T + GR A +E L+
Sbjct: 252 RVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGN 311
Query: 231 ------------HRWTCRLLLPLYAELGKADQ---------VARIWKLCESNPWLDVCMA 269
H L + L+ E+ ADQ I L ++ +D C
Sbjct: 312 AVTYSTLVSAFLHCNNVALAMELFHEM--ADQGYPPDAVMYFTMISGLTQAGRLVDACNI 369
Query: 270 A------------------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
A I + + ++ EA +F+ M + Y LL
Sbjct: 370 AASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCK 429
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
S +L+ M + GC + + LV + + G+ ++A I ++ + + +P
Sbjct: 430 AGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKI-FRSMGEARIQPNTV 488
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRM 429
Y ++D K ++ K+F MR+ A + L++ + P A+ + D+M
Sbjct: 489 IYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM 548
Query: 430 RADNVFPN 437
+ + P+
Sbjct: 549 KEERCTPD 556
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 134/325 (41%), Gaps = 25/325 (7%)
Query: 106 GNNVKKAE--EVFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVLLLMEKENVKLT 161
GN K AE +VF +K+ N LL ++ + +D + V+ V M++
Sbjct: 255 GNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSE-VSGVFKEMKRAGFVPE 313
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+ +Y LI + + + M GI PD ST + GG E++E +
Sbjct: 314 RDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFA 373
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNK-- 279
EM+ K + T LL YA GK ++ R+ L E ++C IE L K
Sbjct: 374 EMKDGRCKPNELTYCSLLHAYAN-GK--EIGRMLALAE-----EICSGVIEPHAVLLKTL 425
Query: 280 ---------VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ EAE F + + A+L +Y +M +K +++ M ESG
Sbjct: 426 VLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGF 485
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+++L+ +H E+++ +L K KP SY ++ Y + G +
Sbjct: 486 TPSLATYNSLMYMHSRSENFERSEEVL-KEILAKGIKPDTISYNTVIFAYCRNGRMKEAS 544
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
+IF MR+ G V + T V +Y
Sbjct: 545 RIFSEMRESGLVPDVITYNTFVASY 569
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 133/323 (41%), Gaps = 17/323 (5%)
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
K++GL + +P+ E Y TL+ C G+ ++A VF MK GF
Sbjct: 87 KIKGLFEGMKNAGVLPD----EYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTY 142
Query: 132 NQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
N LL +Y + + K A +VL ME + +Y LI + L ++ M
Sbjct: 143 NALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVE 202
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
GI D T L +V G+ E A + EM K + T L+ ++ GK +
Sbjct: 203 GGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAE 262
Query: 251 VARIWKLCESNPWLDVCMAAIEAWGKLNKV-------EEAEAVFKRMSKTWKKLSTKHYT 303
+ ++++ +++ C+ I W L V E VFK M + Y
Sbjct: 263 MMKVFEEIKNS----CCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYN 318
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
L+ Y+ + D+ K+M E+G ++A++ GG E+++ I + +
Sbjct: 319 TLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAE-MKD 377
Query: 364 NKFKPMFSSYMLIMDQYAKRGDI 386
+ KP +Y ++ YA +I
Sbjct: 378 GRCKPNELTYCSLLHAYANGKEI 400
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 155/367 (42%), Gaps = 9/367 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK--IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + LD+ K R ++A +++ + V Y +L++ +K+A E+ N+M
Sbjct: 142 YNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMV 201
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+ G + F LL + R K + A V M K ++ LI + G
Sbjct: 202 EGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFA 261
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
M +V E +K+ PD T L + G + + KEM+ R T L+
Sbjct: 262 EMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLI 321
Query: 240 PLYAELGKADQVARIWK-LCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
Y+ G DQ I+K + E+ P L A + A + E++E +F M K
Sbjct: 322 SAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCK 381
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ Y +LL YA+ K + + L +++ + LV ++ + + +A+
Sbjct: 382 PNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVA 441
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
L+ +++ F P S+ ++ Y +R T +I + M + G+ + +L+ Y+
Sbjct: 442 FLELKRKG-FSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLM--YM 498
Query: 417 NAKTPAY 423
++++ +
Sbjct: 499 HSRSENF 505
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 121/312 (38%), Gaps = 41/312 (13%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKI 167
V A + N + GF + +A L+ + + A ++ ME+E K T +Y +
Sbjct: 14 VSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNV 73
Query: 168 LIDIKGQS----NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
++++ G+ N + G+ E MK+ G+ PD T L G E+A A+ K+M
Sbjct: 74 ILNVYGKMGMPWNKIKGL---FEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDM 130
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
+ + T N LDV +GK + +EA
Sbjct: 131 KSMGFVPDKVT-------------------------YNALLDV-------YGKSRRTKEA 158
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
V + M S Y +L+ YA +L + +L QM E G ++ + L+
Sbjct: 159 MEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSG 218
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
V G+ E A + + + KP ++ ++ + RG K+F ++ V
Sbjct: 219 FVRAGKDESAMRVFAEMRAAG-CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVP 277
Query: 404 RFKQFQTLVQAY 415
+ TL+ +
Sbjct: 278 DIVTWNTLLAVF 289
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 113/263 (42%), Gaps = 21/263 (7%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I + G+ ++ ++ + +G D L VS GR +A + K+ME +
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 227 NLKEHRWTCRLLLPLYAELGKA-DQVARIWKLCES----------NPWLDVCMAAIEAWG 275
K T ++L +Y ++G +++ +++ ++ N + C G
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRR-----G 117
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
L+ EEA AVFK M Y ALL VY + + +++++M +GC +
Sbjct: 118 SLH--EEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIV 175
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQ-QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+++L+ + G +++A + LK Q + +Y ++ + + G S ++F
Sbjct: 176 TYNSLISAYARDGLLKEA--MELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFA 233
Query: 395 RMRQVGYVARFKQFQTLVQAYIN 417
MR G F L++ + N
Sbjct: 234 EMRAAGCKPNICTFNALIKMHGN 256
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILI 169
+AE F +K KGF N +L +Y R K ++L M + + +Y L+
Sbjct: 437 EAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLM 496
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
+ +S + ++V++ + ++GI+PD+ + + Y GR ++A + EM L
Sbjct: 497 YMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLV 556
Query: 230 EHRWTCRLLLPLYA 243
T + YA
Sbjct: 557 PDVITYNTFVASYA 570
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 133/308 (43%), Gaps = 7/308 (2%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
A E F+R D GF +++ +CN +L+ L K V V M + + + ++ ++I+
Sbjct: 178 ALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN 237
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ VVE MK+ G P T + Y G+ KA+A+LKEM +
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP 297
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVF 287
+ T +L+ + ++++ + P + + I K++EA +
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+MS K + Y AL+ + KML + ++++ + + G + ++ L+ + +
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 348 GEVEKADSILLKAQQ-QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
G ++ D+ LL++ P S+Y ++ + + G++ K+ M G A
Sbjct: 418 GRMD--DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLV 475
Query: 407 QFQTLVQA 414
+ LV A
Sbjct: 476 TYNILVDA 483
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 146/342 (42%), Gaps = 16/342 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNV----------KKAEEVFNRMKDKGFPVTSFACNQLL 135
+ ES E++ R + N V + V +KA +V MK GF + N ++
Sbjct: 212 VVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTII 271
Query: 136 ILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE 194
Y + K AD LL M + + + ++ ILID + ++T +V E M+ +G++
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQ 331
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE---LGKADQV 251
P+ T L S G+ ++A + +M G LK + T L+ + + L +A ++
Sbjct: 332 PNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM 391
Query: 252 ARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
P + I+A+GK ++++A + M T + Y L+ +
Sbjct: 392 LDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCR 451
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQQNKFKPM 369
+ + + L K+M +G + ++ LV + GE KA +L + ++ +
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRAN 511
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+Y +++ + +G + ++ + M + G + + L
Sbjct: 512 IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 97/235 (41%), Gaps = 6/235 (2%)
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWL 264
V GR E++ KEM + + T +++ ++GK A V K +P +
Sbjct: 205 VKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV 264
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
I+ + K K+ +A+A+ K M + + L+ + + ++ K + ++
Sbjct: 265 ITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEE 324
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M G + +++L+ G++++A + K KP +Y +++ + K+
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG-LKPNVVTYNALINGFCKKK 383
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
+ ++ + + G F TL+ AY A A+ +R M V PN
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 101/265 (38%), Gaps = 30/265 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLL 152
V Y +L+ + + +A + ++M G N L+ + K+ K+ ++L
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ K + ++ LID G++ + + M G+ P+ ST L + G
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGN 454
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
++A + KEMEG+ LK T +L+ + G+ + R+
Sbjct: 455 VKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL------------------ 496
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
++E M K ++ + Y L+K + + L + L+ +M E G
Sbjct: 497 -------LDE----MTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 545
Query: 333 GPLAWDALVKLHVEGGEVEKADSIL 357
+D L +E G + D L
Sbjct: 546 NRTTYDILRDEMMEKGFIPDIDGHL 570
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 168/411 (40%), Gaps = 41/411 (9%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDL 69
+ L KYA +GN +SR + + + + + ++ +EWL +F ++DY
Sbjct: 105 AILKKYAGDGN-ISRESVVGTLTRFKQMQAWKIIIKFTEWLMEQGWYNFNQKDY------ 157
Query: 70 IAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSF 129
+ LLA C G V K E +F RM + G V +
Sbjct: 158 --------------------------FLVLLAYCKDGQ-VDKTEGIFQRMAELGV-VANI 189
Query: 130 ACNQLLI--LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDI---KGQSNDLTGMDQV 184
L I +R K V + T +Y+ ++ G+ +D+ + ++
Sbjct: 190 EMYTLQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKL 249
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
V S ++PD+ ++ Y G+ E+A ++ + M+ + + T LL
Sbjct: 250 VTDSPSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKT 309
Query: 245 LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
A+ V R + + +P + A + A+ K + E A A F M + + Y A
Sbjct: 310 WKDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNA 369
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
L+ YA K + ++KQM ++GC ++ +L+ +V + KA+ +L+ ++ +
Sbjct: 370 LINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEAD 429
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+P ++ ++M YA + + + F M+ G + LV AY
Sbjct: 430 -LQPNLQTFCVLMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAY 479
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 100/249 (40%), Gaps = 42/249 (16%)
Query: 211 GRK---EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC 267
GR+ +KAEA+ + + T + ++ Y+E G+ D V RI+KL +P V
Sbjct: 200 GRRRSFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVK 259
Query: 268 MAA------IEAWGKLNKVEEAEAVFKRM------------------SKTWK-------K 296
A I +GK KVE+A +V++ M KTWK K
Sbjct: 260 PDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAEDVFRK 319
Query: 297 LSTK-------HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
L YTAL+ YA + M +G +A++AL+ + + +
Sbjct: 320 LQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKD 379
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
E A ++ LK +QN P SY ++ Y + E+ RM++ + F
Sbjct: 380 PEGARAV-LKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFC 438
Query: 410 TLVQAYINA 418
L+ Y N
Sbjct: 439 VLMTGYANG 447
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 93/252 (36%), Gaps = 5/252 (1%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
V++A V+ MK + +T N LL K K DV ++ + FSY L
Sbjct: 278 VEQAMSVYQSMKRERVALTIVTFNSLLACQKTW--KDAEDVFRKLQAAKLDPDVFSYTAL 335
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
++ ++ + M + GI P L Y E A A+LK+M+ +
Sbjct: 336 VNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGC 395
Query: 229 KEHRWTCRLLLPLYAE---LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
+ L+ Y + KA+Q K + P L + + NK++
Sbjct: 396 TPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCVLMTGYANGNKLDNMMR 455
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
F+ M + + YT L+ Y + KQM +G P+ L+K+
Sbjct: 456 SFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGYKPDPILRTVLLKIAK 515
Query: 346 EGGEVEKADSIL 357
+ E+ +L
Sbjct: 516 SHEQTEEIHELL 527
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 3/178 (1%)
Query: 55 KLDFIERDYASCLDLIAKLRGLQKAES-YIQKIPESFRG-EVVYRTLLANCVAGNNVKKA 112
KLD Y + ++ AK R + A + + I R +V Y L+ + + A
Sbjct: 324 KLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGA 383
Query: 113 EEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDI 171
V +MK G T + L+ Y ++ K +L M++ +++ ++ +L+
Sbjct: 384 RAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCVLMTG 443
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
N L M + E MK G+EP+ +L Y S + A K+M G K
Sbjct: 444 YANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGYK 501
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 133/308 (43%), Gaps = 7/308 (2%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
A E F+R D GF +++ +CN +L+ L K V V M + + + ++ ++I+
Sbjct: 178 ALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN 237
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ VVE MK+ G P T + Y G+ KA+A+LKEM +
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP 297
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVF 287
+ T +L+ + ++++ + P + + I K++EA +
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+MS K + Y AL+ + KML + ++++ + + G + ++ L+ + +
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 348 GEVEKADSILLKAQQ-QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
G ++ D+ LL++ P S+Y ++ + + G++ K+ M G A
Sbjct: 418 GRMD--DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLV 475
Query: 407 QFQTLVQA 414
+ LV A
Sbjct: 476 TYNILVDA 483
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 5/312 (1%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKIL 168
+KA +V MK GF + N ++ Y + K AD LL M + + + ++ IL
Sbjct: 246 QKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNIL 305
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
ID + ++T +V E M+ +G++P+ T L S G+ ++A + +M G L
Sbjct: 306 IDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGL 365
Query: 229 KEHRWTCRLLLPLYAE---LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
K + T L+ + + L +A ++ P + I+A+GK ++++A
Sbjct: 366 KPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFL 425
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+ M T + Y L+ + + + + L K+M +G + ++ LV
Sbjct: 426 LRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALC 485
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
+ GE KA LL + P +Y ++D Y + G+ + + M + G A
Sbjct: 486 KKGETRKAVR-LLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANI 544
Query: 406 KQFQTLVQAYIN 417
+ L++ + N
Sbjct: 545 VTYNVLIKGFCN 556
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 4/268 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLL 152
V Y +L+ + + +A + ++M G N L+ + K+ K+ ++L
Sbjct: 335 VTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDD 394
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ K + ++ LID G++ + + M G+ P+ ST L + G
Sbjct: 395 IGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGN 454
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCES--NPWLDVCMA 269
++A + KEMEG+ LK T +L+ + G+ + R+ ++ E NP A
Sbjct: 455 VKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNA 514
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + + A V M K ++ + Y L+K + + L + L+ +M E G
Sbjct: 515 LIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG 574
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSIL 357
+D L +E G + D L
Sbjct: 575 LIPNRTTYDILRDEMMEKGFIPDIDGHL 602
>gi|218192142|gb|EEC74569.1| hypothetical protein OsI_10130 [Oryza sativa Indica Group]
Length = 823
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 173/415 (41%), Gaps = 15/415 (3%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALA-MANLRTRRMYGKALQLSEWLETNKKLDFIER 61
APD S + TL +G R +AL + ++ R + + +S L+ +KK E+
Sbjct: 173 APDNSTYGTLIDVHCKG---GRERMALLWLGDMIKRGLLPDEITMSIVLQVHKKAGEYEK 229
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
+L K L ES ++ Y TL+ ++K + FN+M
Sbjct: 230 -----AELFFKRWSL---ESDVKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQMLR 281
Query: 122 KGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
+G N ++ ++ K ++VA ++ ME+ +Y ILI + + ND+
Sbjct: 282 EGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCLPDTRTYNILISLYREINDIDV 341
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+ MK+E + PD + L Y G +A+A+LKEM N+ +T +
Sbjct: 342 AEYYFRKMKAENLLPDVVSCRTLLYGYSIKGMVTEAQALLKEMYERNMVIDEYTQSAVTR 401
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
+Y + G +Q R ++ + A I+A+G+ + AE F K K LST
Sbjct: 402 MYVDAGMLEQAWRWFEKFNYQLNSECFSANIDAFGERGHILLAEKAFMCCIKR-KMLSTC 460
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
++K Y + L + ++ M G L + +L+ L EKA L+
Sbjct: 461 VCNVMIKAYGLVEKLDEACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKA-LYYLRK 519
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Q K Y +++ +AK G++H + +F M G A + L+ AY
Sbjct: 520 MQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAY 574
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y ++I ++ +L +D + M + GI+ D+ +IL Y G +KAEA ++
Sbjct: 532 YSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLK 591
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-----NPWLDVCMAAIEAWGKLNK 279
L E L+ LY ++ + +++KL +S N + CM I+ +
Sbjct: 592 KAGLCESATIYNSLIKLYTKVVYLAEAQKMYKLLKSLNADTNLYASNCM--IDLYSDHCM 649
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
V+EA +F+ + T K H ++ +Y + + K+M SG L++++
Sbjct: 650 VKEAREIFENLKVTGKANEFSH-AMMVCLYKKIARFDEAHRISKEMQASGFLTQALSYNS 708
Query: 340 LVKLHVEGGEVEKADSILLKAQQQN 364
+++++V GG +E A I K N
Sbjct: 709 VIQMYVSGGRMEDALKIFQKMLASN 733
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 112/267 (41%), Gaps = 17/267 (6%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +++ G++ + ++ M S G+ PD+ST L + GGR+ A L +M
Sbjct: 144 YNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNSTYGTLIDVHCKGGRERMALLWLGDMI 203
Query: 225 GDNLKEHRWTCRLLLPLYAELG---KADQVARIWKL----------CESNPWLDVCMAAI 271
L T ++L ++ + G KA+ + W L C S L I
Sbjct: 204 KRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYS---LYTYNTLI 260
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ +GK ++E+ F +M + + + ++ V+ H+ + + L++ M E C
Sbjct: 261 DTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCL 320
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
++ L+ L+ E +++ A+ K + +N + S L+ Y+ +G + +
Sbjct: 321 PDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPDVVSCRTLLYG-YSIKGMVTEAQA 379
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINA 418
+ M + V + + Y++A
Sbjct: 380 LLKEMYERNMVIDEYTQSAVTRMYVDA 406
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 7/278 (2%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I G L ++ + M+ GI PD T + L + EKA L++M+
Sbjct: 464 VMIKAYGLVEKLDEACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAA 523
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCMAAI--EAWGKLNKVEEA 283
L +++ +A+ G V +++ + S D + +I +A+ ++ V++A
Sbjct: 524 KLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKA 583
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
EA F + K S Y +L+K+Y L++ + + K + A + ++ L
Sbjct: 584 EAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKMYKLLKSLNADTNLYASNCMIDL 643
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ + V++A I + K FS M++ Y K +I M+ G++
Sbjct: 644 YSDHCMVKEAREIFENLKVTGKANE-FSHAMMVC-LYKKIARFDEAHRISKEMQASGFLT 701
Query: 404 RFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKA 439
+ + +++Q Y++ A I +M A N PN A
Sbjct: 702 QALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDA 739
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 115/261 (44%), Gaps = 23/261 (8%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y+ +D A++ +QKAE+Y + ++ E +Y +L+ + +A++++ +K
Sbjct: 567 YSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKMYKLLK 626
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLT----QFSYKILIDIKGQSN 176
+A N ++ LY K A + EN+K+T +FS+ +++ + +
Sbjct: 627 SLNADTNLYASNCMIDLYSDHCMVKEAREIF----ENLKVTGKANEFSHAMMVCLYKKIA 682
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
++ + M++ G + + + + YVSGGR E A + ++M N + T +
Sbjct: 683 RFDEAHRISKEMQASGFLTQALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDATFK 742
Query: 237 LLLPLYAELGKADQVARIWKLCESNPWLD--------VCMAAIEAWGKLNKVEEAEAVFK 288
L + + G ++ R +L N D +CMA ++ + A+
Sbjct: 743 ALKIILVKRGVSNNDIRRLELLRKNRIHDCLRHWYRMLCMAVRSGGSSSRRISDNSALRT 802
Query: 289 RM-----SKTWKKLSTKHYTA 304
+ SK+ K+ + KH T+
Sbjct: 803 HIFDIGNSKSGKRNTRKHVTS 823
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 17/273 (6%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAM-KSEG----------IEPDSSTQAILAKHYVSGGR 212
+Y L+ D G + V+ M + EG + P+ T L Y +GG
Sbjct: 230 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 289
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMA 269
E +EA+L+ ME + + T +L+ Y G A+ V R P +
Sbjct: 290 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTT 349
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+ AE V RM + + L+ VYA + K ++ +M +G
Sbjct: 350 LLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAG 409
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS-SYMLIMDQYAKRGDIHS 388
+A+D L+ +V G+V A+ +L + ++ + P F +Y +M+ YA +GD+
Sbjct: 410 VGPTAMAFDTLLNAYVVAGDVGGAEQVLRR--REAEAYPDFPLTYNTLMNGYADKGDVAG 467
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
E + RMR G TL+ AY A P
Sbjct: 468 AEGVLARMRAKGVGPDETTLSTLLHAYAEAGDP 500
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 122/296 (41%), Gaps = 27/296 (9%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
++ ++ + D G + V+ + + G+ PD T L Y G E AEA+L+ M
Sbjct: 195 TFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRM 254
Query: 224 ---EGDNLKEHR--------WTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA-- 270
EG ++E T L+ YA G + + + E + C+A
Sbjct: 255 LEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERME-----EACIAPNV 309
Query: 271 ------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ A+ V+ AE V +RM + + YT LL Y + + ++++ +
Sbjct: 310 MTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLAR 369
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M +G L + L+ ++ GEVE A +L + + P ++ +++ Y G
Sbjct: 370 MEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAG-VGPTAMAFDTLLNAYVVAG 428
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNK 438
D+ E++ R Y + TL+ Y + A G+ RMRA V P++
Sbjct: 429 DVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDE 484
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 125/329 (37%), Gaps = 42/329 (12%)
Query: 3 APDI-SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DFIE 60
+PD+ + H+ + YA+E D AE+ L WL L D +
Sbjct: 190 SPDLPTFHTVMKVYADE-RDPEGAEMVLG------------------WLLARGLLPDVV- 229
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV-------------VYRTLLANCVAGN 107
Y + + A + AE+ ++++ E G V Y TL+ AG
Sbjct: 230 -TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGG 288
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYK 166
+V+ +E V RM++ L+ Y R D K VL M V +Y
Sbjct: 289 DVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYT 348
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
L+ + + G ++V+ M++ G+ P + T A L Y + G E A+ +L ME
Sbjct: 349 TLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAA 408
Query: 227 NLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNPWLDVCMAAI-EAWGKLNKVEE 282
+ LL Y ++G A+QV R + E+ P + + + V
Sbjct: 409 GVGPTAMAFDTLLNAYVVAGDVGGAEQVLR-RREAEAYPDFPLTYNTLMNGYADKGDVAG 467
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
AE V RM + LL YA+
Sbjct: 468 AEGVLARMRAKGVGPDETTLSTLLHAYAE 496
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 61/153 (39%), Gaps = 1/153 (0%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y TLL N AEEV RM+ G T+ L+ +Y R + + VL M
Sbjct: 346 TYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARM 405
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E V T ++ L++ + D+ G +QV+ ++E T L Y G
Sbjct: 406 EAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDV 465
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
AE +L M + T LL YAE G
Sbjct: 466 AGAEGVLARMRAKGVGPDETTLSTLLHAYAEAG 498
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
+ + TL+ A V+ A+ V RM+ G T+ A + LL Y D VL
Sbjct: 380 LTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRR 439
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
E E +Y L++ D+ G + V+ M+++G+ PD +T + L Y G
Sbjct: 440 REAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGD 499
Query: 213 KEKAEAML 220
AEA+L
Sbjct: 500 PLGAEAVL 507
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 17/273 (6%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAM-KSEG----------IEPDSSTQAILAKHYVSGGR 212
+Y L+ D G + V+ M + EG + P+ T L Y +GG
Sbjct: 244 TYTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGD 303
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMA 269
E +EA+L+ ME + + T +L+ Y G A+ V R P +
Sbjct: 304 VEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTT 363
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+ AE V RM + + L+ VYA + K ++ +M +G
Sbjct: 364 LLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAG 423
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS-SYMLIMDQYAKRGDIHS 388
+A+D L+ +V G+V A+ +L + ++ + P F +Y +M+ YA +GD+
Sbjct: 424 VGPTAMAFDTLLNAYVVAGDVGGAEQVLRR--REAEAYPDFPLTYNTLMNGYADKGDVAG 481
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
E + RMR G TL+ AY A P
Sbjct: 482 AEGVLARMRAKGVGPDETTLSTLLHAYAEAGDP 514
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 122/296 (41%), Gaps = 27/296 (9%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
++ ++ + D G + V+ + + G+ PD T L Y G E AEA+L+ M
Sbjct: 209 TFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTYTTLMHAYAGRGDTEGAEAVLRRM 268
Query: 224 ---EGDNLKEHR--------WTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA-- 270
EG ++E T L+ YA G + + + E + C+A
Sbjct: 269 LEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERME-----EACIAPNV 323
Query: 271 ------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ A+ V+ AE V +RM + + YT LL Y + + ++++ +
Sbjct: 324 MTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYTVNGNAAGAEEVLAR 383
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M +G L + L+ ++ GEVE A +L + + P ++ +++ Y G
Sbjct: 384 MEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAG-VGPTAMAFDTLLNAYVVAG 442
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNK 438
D+ E++ R Y + TL+ Y + A G+ RMRA V P++
Sbjct: 443 DVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDE 498
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 125/329 (37%), Gaps = 42/329 (12%)
Query: 3 APDI-SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DFIE 60
+PD+ + H+ + YA+E D AE+ L WL L D +
Sbjct: 204 SPDLPTFHTVMKVYADE-RDPEGAEMVLG------------------WLLARGLLPDVVT 244
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV-------------VYRTLLANCVAGN 107
Y + + A + AE+ ++++ E G V Y TL+ AG
Sbjct: 245 --YTTLMHAYAGRGDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGG 302
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYK 166
+V+ +E V RM++ L+ Y R D K VL M V +Y
Sbjct: 303 DVEGSEAVLERMEEACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYT 362
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
L+ + + G ++V+ M++ G+ P + T A L Y + G E A+ +L ME
Sbjct: 363 TLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAA 422
Query: 227 NLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNPWLDVCMAAI-EAWGKLNKVEE 282
+ LL Y ++G A+QV R + E+ P + + + V
Sbjct: 423 GVGPTAMAFDTLLNAYVVAGDVGGAEQVLR-RREAEAYPDFPLTYNTLMNGYADKGDVAG 481
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
AE V RM + LL YA+
Sbjct: 482 AEGVLARMRAKGVGPDETTLSTLLHAYAE 510
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 61/153 (39%), Gaps = 1/153 (0%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y TLL N AEEV RM+ G T+ L+ +Y R + + VL M
Sbjct: 360 TYTTLLHAYTVNGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARM 419
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E V T ++ L++ + D+ G +QV+ ++E T L Y G
Sbjct: 420 EAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRRREAEAYPDFPLTYNTLMNGYADKGDV 479
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
AE +L M + T LL YAE G
Sbjct: 480 AGAEGVLARMRAKGVGPDETTLSTLLHAYAEAG 512
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
+ + TL+ A V+ A+ V RM+ G T+ A + LL Y D VL
Sbjct: 394 LTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMAFDTLLNAYVVAGDVGGAEQVLRR 453
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
E E +Y L++ D+ G + V+ M+++G+ PD +T + L Y G
Sbjct: 454 REAEAYPDFPLTYNTLMNGYADKGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGD 513
Query: 213 KEKAEAML 220
AEA+L
Sbjct: 514 PLGAEAVL 521
>gi|193806506|sp|Q940Z1.2|PPR51_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g19525
Length = 316
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
L+ + +S + + E +KS G+ PD + YV+ G+ + E ++KEM+
Sbjct: 16 LVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKE 75
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPW-LDVCMAAIEAWGKLNKVEEA 283
LK LL YA++G A+ A I + P + +EA+GK +V++A
Sbjct: 76 LKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKA 135
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
++ F M K K K L++ Y L K L+ Q+ + G IG + + LV
Sbjct: 136 KSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDW 195
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPM 369
G +E+A+ +L+K Q + P
Sbjct: 196 MANLGLIEEAEQLLVKISQLGEAPPF 221
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P + A + + K E A F+ + + K Y A++ Y + G+ L
Sbjct: 8 PDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERL 67
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+K+M + AL++ + + G+ A I Q + F +Y L ++ Y
Sbjct: 68 MKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYG 127
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
K G + + F MR++G+ K LV+AY
Sbjct: 128 KAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAY 161
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 140/349 (40%), Gaps = 7/349 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y T++ +AE VF +M D GF ++ N L+ Y + K K+V +L
Sbjct: 235 VTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEE 294
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M +K ++Y L++ ++ ++M +GI+P ST IL Y + G
Sbjct: 295 MSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGA 354
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
+ + L M + L + YA+ G D+ I+ + P + A
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 414
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+A KL +V++AE F +M + + +L+ + ++LV +M + G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ L+ G V + L+ + +P SY ++ Y G
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRR-LIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEA 533
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFP 436
EK+F M +G + TL+ Y +A AY + M V P
Sbjct: 534 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTP 582
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 88/228 (38%), Gaps = 4/228 (1%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M GI PD T + ++AE + ++M + K + +T L+ Y +GK
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK 284
Query: 248 ADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
+V ++ + + C + + K + EA F M + K Y
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
L+ YA LS+ + M E+G ++ + + G ++KA I K +Q
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
P +Y ++D K G + E F++M G F +LV
Sbjct: 405 -LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV 451
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 107/270 (39%), Gaps = 19/270 (7%)
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN---LKEHRWTCRL 237
MD +++ M G PD+ + IL K + R E+A +L M D+ + + +
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204
Query: 238 LLPLYAELGKADQVARIW-KLCESNPWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ + G+ D+ ++ ++ + DV I+ K + AE VF++M
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264
Query: 295 KKLSTKHYTALLKVYADHKMLSKGK-----DLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
K + Y L+ H LS GK ++++M+ G + +L+ + G
Sbjct: 265 FKPNNYTYNCLI-----HGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGR 319
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+A + + KP S+Y +++ YA +G + M + G F
Sbjct: 320 CREA-RFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFN 378
Query: 410 TLVQAYINAKT--PAYGIRDRMRADNVFPN 437
AY A I ++MR + PN
Sbjct: 379 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPN 408
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD---V 149
EV Y TLL + + + A +F M KG VT IL+ K+ ++ +
Sbjct: 549 EVTYNTLLHGYCSASRIDDAYCLFREMLRKG--VTPGVVTYNTILHGLFQTKRFSEAKEL 606
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
L M K ++Y I+++ +SN + ++ +++ S+G++ + T I+ +
Sbjct: 607 YLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLK 666
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
GGRKE A + + + L + T RL+ E G ++ ++ E N
Sbjct: 667 GGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKN 718
>gi|356574710|ref|XP_003555488.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 821
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 152/373 (40%), Gaps = 17/373 (4%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLIL---YKRLDKKKVAD 148
G Y TL+ +K+A + F M +G T+ N ++ + + RL++ V+
Sbjct: 280 GSHTYNTLIDTYGKAGQLKEASQTFVEMLKQGVAPTTVTFNTMINICGNHGRLEE--VSL 337
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
++ ME+ +Y ILI + + +D+ + E MK +EPD + L Y
Sbjct: 338 LVRKMEELRCSPNTRTYNILISLHAKHDDIGMATKYFETMKEACLEPDLVSYRTLLYAYS 397
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL---CESNPWLD 265
+AE ++KEM+ L+ ++T L +Y E G D+ + +W L N +
Sbjct: 398 IRKMIREAEELVKEMDKRRLEIDQYTQSALTRMYIEAGMLDR-SLLWFLRFHVAGNMTSE 456
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
A I+A+G+ EAE VF K K LS + ++K Y K K L M
Sbjct: 457 CYAANIDAYGEHGHTLEAEKVFIWCQKQ-KNLSVLEFNVMIKAYGIGKCYEKACQLFDSM 515
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ G ++ +L+ + + A L K Q+ Y ++ +AK G
Sbjct: 516 EKHGVVADRCSYTSLIHILASADQPHIAKPYLKKMQEAGLVSDCI-PYCAVISSFAKLGQ 574
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMR----ADNVFPNKA 439
+ TE I+ M + G L+ + +A A G D M+ N +
Sbjct: 575 LEMTEDIYREMIRHGVQPDVIVHGILINVFSDAGRVKEAIGYVDEMKKAGLPGNTVIYNS 634
Query: 440 LAAQVAQVDAFRK 452
L A++D K
Sbjct: 635 LIKLYAKIDNLEK 647
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 117/301 (38%), Gaps = 33/301 (10%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILI 169
+A E+F KG + N +L R + ++V + M + T +Y LI
Sbjct: 130 RALEIFEWFNKKGHELNVIHYNIMLRSLGRARQWRRVESLWNEMNARGIAATCSTYGTLI 189
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D+ + + M +G++PD T I+ + Y G +K E +
Sbjct: 190 DVYSKGGRRDDALSWLNMMLGQGVQPDEVTMVIVVQLYKKAGEFQKGEEFFR-------- 241
Query: 230 EHRWTC-RLLLPLYAELGKADQVARIWKLCESNPWLD---VCMAA----------IEAWG 275
+W+ + L L D V ++P LD C A I+ +G
Sbjct: 242 --KWSSGKPLRSKSKPLRSNDNVV-------ASPELDERVACANASFGSHTYNTLIDTYG 292
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
K +++EA F M K +T + ++ + +H L + LV++M E C
Sbjct: 293 KAGQLKEASQTFVEMLKQGVAPTTVTFNTMINICGNHGRLEEVSLLVRKMEELRCSPNTR 352
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
++ L+ LH + ++ A + ++ +P SY ++ Y+ R I E++
Sbjct: 353 TYNILISLHAKHDDIGMATK-YFETMKEACLEPDLVSYRTLLYAYSIRKMIREAEELVKE 411
Query: 396 M 396
M
Sbjct: 412 M 412
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 156/357 (43%), Gaps = 21/357 (5%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L AK + A Y + + E+ V YRTLL +++AEE+
Sbjct: 352 RTYNILISLHAKHDDIGMATKYFETMKEACLEPDLVSYRTLLYAYSIRKMIREAEELVKE 411
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENV--KLTQFSYKILIDIKGQSN 176
M + + + + L +Y ++ + LL + +V +T Y ID G+
Sbjct: 412 MDKRRLEIDQYTQSALTRMY--IEAGMLDRSLLWFLRFHVAGNMTSECYAANIDAYGEHG 469
Query: 177 DLTGMDQV-VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
++V + K + + ++ K Y G EKA + ME + R +
Sbjct: 470 HTLEAEKVFIWCQKQKNLSVLEFN--VMIKAYGIGKCYEKACQLFDSMEKHGVVADRCSY 527
Query: 236 RLLLPLYAELGKADQ--VARIW--KLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFK 288
L+ + L ADQ +A+ + K+ E+ D C+ A I ++ KL ++E E +++
Sbjct: 528 TSLIHI---LASADQPHIAKPYLKKMQEAGLVSD-CIPYCAVISSFAKLGQLEMTEDIYR 583
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M + + + L+ V++D + + V +M ++G + +++L+KL+ +
Sbjct: 584 EMIRHGVQPDVIVHGILINVFSDAGRVKEAIGYVDEMKKAGLPGNTVIYNSLIKLYAKID 643
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
+EKA Q ++ ++SS +I D Y KR + ++IF +++ G F
Sbjct: 644 NLEKAKEAYKLLQLSDEGPGVYSSNCMI-DLYVKRSMVDQAKEIFETLKKNGAANEF 699
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 111/270 (41%), Gaps = 10/270 (3%)
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
N +Y LID G++ L Q M +G+ P + T + + GR E+
Sbjct: 276 NASFGSHTYNTLIDTYGKAGQLKEASQTFVEMLKQGVAPTTVTFNTMINICGNHGRLEEV 335
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEA 273
++++ME + T +L+ L+A ++G A + K P L + A
Sbjct: 336 SLLVRKMEELRCSPNTRTYNILISLHAKHDDIGMATKYFETMKEACLEPDLVSYRTLLYA 395
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ + EAE + K M K ++L YT AL ++Y + ML + + +G +
Sbjct: 396 YSIRKMIREAEELVKEMDK--RRLEIDQYTQSALTRMYIEAGMLDRSLLWFLRFHVAG-N 452
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ + A + + E G +A+ + + Q+Q + + +++ Y +
Sbjct: 453 MTSECYAANIDAYGEHGHTLEAEKVFIWCQKQKNLSVL--EFNVMIKAYGIGKCYEKACQ 510
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+F M + G VA + +L+ +A P
Sbjct: 511 LFDSMEKHGVVADRCSYTSLIHILASADQP 540
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 6/269 (2%)
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
L+ + ++I G Q+ ++M+ G+ D + L S + A+
Sbjct: 487 LSVLEFNVMIKAYGIGKCYEKACQLFDSMEKHGVVADRCSYTSLIHILASADQPHIAKPY 546
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCMAAI--EAWGK 276
LK+M+ L ++ +A+LG+ + I++ + DV + I +
Sbjct: 547 LKKMQEAGLVSDCIPYCAVISSFAKLGQLEMTEDIYREMIRHGVQPDVIVHGILINVFSD 606
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+V+EA M K +T Y +L+K+YA L K K+ K + S G +
Sbjct: 607 AGRVKEAIGYVDEMKKAGLPGNTVIYNSLIKLYAKIDNLEKAKEAYKLLQLSDEGPGVYS 666
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ ++ L+V+ V++A I ++ + ML + + +R D +I ++
Sbjct: 667 SNCMIDLYVKRSMVDQAKEIFETLKKNGAANEFTFAMMLCLYKKIERFD--EAIQIAKQI 724
Query: 397 RQVGYVARFKQFQTLVQAYINAKTPAYGI 425
R++G + + ++ Y A P I
Sbjct: 725 RKLGPLTDL-SYNNVLDLYAIAGRPKEAI 752
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 181/455 (39%), Gaps = 57/455 (12%)
Query: 24 RAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD--YASCLDLIAKLRGLQKAES 81
R E+ TRR W+ N +D + +D + + ++ +L+ S
Sbjct: 76 RPELGFRFFIWTTRRR-----SFRSWVTHNLVIDMLAKDDGFDTYWKILEELK-----NS 125
Query: 82 YIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL 141
IQ P +F L+A +KA E F +MKD G F N IL+ +
Sbjct: 126 NIQIPPPTFS------VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNS--ILHVMV 177
Query: 142 DKKKVADVLLL-------MEKENVKLTQFSYKILID---IKGQSNDLTGMDQVVEAMKSE 191
K +V LL M K N + ++ IL++ G+++D M + M +
Sbjct: 178 QK----EVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKM---FDEMTQK 230
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
GI P++ I+ R + +L M+ TC LL + +LG+ D+
Sbjct: 231 GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEA 290
Query: 252 ARIWKLCESNPW---LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
+ +L E + + + I+ + + +E + ++M K + YT L++
Sbjct: 291 FALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRG 350
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ + M+ +++ M + G ++AL+K + G ++KA S+ L+ + + F P
Sbjct: 351 FCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCF-P 409
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA---------- 418
+Y +++ + G + +IF++M +G F L+ A
Sbjct: 410 TSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469
Query: 419 ------KTPAYGIRDRMRADNVFPNKALAAQVAQV 447
K P+ +R AD V +L V ++
Sbjct: 470 YKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERL 504
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 148/366 (40%), Gaps = 20/366 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
++Y +L+ + N MK G S CN LL + +L + A LL L
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
EKE L Y LID ++ + + M GIEPD IL + + G
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGM 356
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLDVCMAAI 271
+ A ML +M L + L+ + ++G D+ + ++ +++ + C I
Sbjct: 357 VDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTI 416
Query: 272 EAWGKLNK--VEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD-----------HKM-LSK 317
G ++EA +F +M S + AL+ +KM + K
Sbjct: 417 LICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGK 476
Query: 318 GKDLVKQMAESGCHIGPLA-WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
L ++++ + A +V+ E G + KA +L++ P +Y ++
Sbjct: 477 NPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSG-VVPDIMTYNVL 535
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNV 434
++ + K +I+ K+F ++ G+ + TL+ + ++ + A+ + D+M +
Sbjct: 536 INGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGC 595
Query: 435 FPNKAL 440
P+ A+
Sbjct: 596 TPSSAV 601
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 166/410 (40%), Gaps = 39/410 (9%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDL 69
+ L KYA +GN +SR + + + + + ++ +EWL +F ++DY
Sbjct: 105 AILKKYAGDGN-ISRESVVGTLTRFKQMQAWKIIIKFTEWLMEQGWYNFNQKDY------ 157
Query: 70 IAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT-S 128
+ LLA C G V K E +F RM + G
Sbjct: 158 --------------------------FLVLLAYCKDGQ-VDKTEGIFQRMAELGVAANIE 190
Query: 129 FACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDI---KGQSNDLTGMDQVV 185
Q+ +R K V + T +Y+ ++ G+ +D+ + ++V
Sbjct: 191 MYTLQIEGYGRRRSFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLV 250
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
S ++PD+ ++ Y G+ E+A ++ + M+ + + T LL
Sbjct: 251 TDSPSPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKTW 310
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
A+ V R + + +P + A + A+ K + E A A F M + + Y AL
Sbjct: 311 KDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNAL 370
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ YA K + ++KQM ++GC ++ +L+ +V + KA+ +L+ ++ +
Sbjct: 371 INAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEAD- 429
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+P ++ ++M YA + + + F M+ G + LV AY
Sbjct: 430 LQPNLQTFCILMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAY 479
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 118/305 (38%), Gaps = 39/305 (12%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
LME+ Q Y +++ + + + + + M G+ + + + Y
Sbjct: 144 LMEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRR 203
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA- 270
+KAEA+ + + T + ++ Y+E G+ D V RI+KL +P V A
Sbjct: 204 SFDKAEAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDAR 263
Query: 271 -----IEAWGKLNKVEEAEAVFKRM------------------SKTWK-------KLSTK 300
I +GK KVE+A +V++ M KTWK KL
Sbjct: 264 MYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAEDVFRKLQAA 323
Query: 301 -------HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
YTAL+ YA + M +G +A++AL+ + + + E A
Sbjct: 324 KLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGA 383
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ LK +QN P SY ++ Y + E+ RM++ + F L+
Sbjct: 384 RAV-LKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCILMT 442
Query: 414 AYINA 418
Y N
Sbjct: 443 GYANG 447
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 99/265 (37%), Gaps = 36/265 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V + +LLA K AE+VF +++ F+ L+ Y + + + A
Sbjct: 298 VTFNSLLA---CQKTWKDAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDD 354
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M ++ TQ +Y LI+ + D G V++ MK G P + L YVS
Sbjct: 355 MIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNL 414
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
KAE + M+ +L+ + T +L+ YA K D + R ++
Sbjct: 415 MAKAEQTVLRMKEADLQPNLQTFCILMTGYANGNKLDNMMRSFETM-------------- 460
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
KL +E V YT L+ Y + KQM +GC
Sbjct: 461 ---KLAGLEPNRHV---------------YTVLVNAYGSNDDFDSAIIWYKQMLGTGCKP 502
Query: 333 GPLAWDALVKLHVEGGEVEKADSIL 357
P+ L+K+ + E+ +L
Sbjct: 503 DPILRTVLLKIAKSHEQTEEIHELL 527
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 155/354 (43%), Gaps = 7/354 (1%)
Query: 67 LDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGF 124
++++ K L+KA+ +I + + VV Y T++ + V+ A V + MK++G
Sbjct: 243 INVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGV 302
Query: 125 PVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
S+ L+ + K ++ + +L M++ + T +Y LID DL
Sbjct: 303 EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFG 362
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ M I P ST +L G+ ++A+ M+K+M + T +L+ Y
Sbjct: 363 YRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYC 422
Query: 244 ELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
G A + + S P L + I K N+++ A+ +F+++ +
Sbjct: 423 RCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLI 482
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+ AL+ + + L + L+K+M + + ++ L++ G+VE+A LLK
Sbjct: 483 MFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE-LLKE 541
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ +P SY ++ Y+KRGDI+ I M +G+ + L+Q
Sbjct: 542 MKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQG 595
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 154/429 (35%), Gaps = 91/429 (21%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK------- 143
+ +V+ L+ C A E F+ MK+KG N +L L+ +L++
Sbjct: 164 KSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVL 223
Query: 144 -----------------------------KKVADVLLLMEKENVKLTQFSYKILIDIKGQ 174
KK D + ME VK +Y +I
Sbjct: 224 YAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCS 283
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
+ G V++ MK+ G+EPDS T L GG+ E+A +L++M+ L T
Sbjct: 284 RGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVT 343
Query: 235 CRLLLPLYAE-------LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
L+ Y G D++ R L P + I A K++EA+ +
Sbjct: 344 YNTLIDGYCNKGDLVKAFGYRDEMVRRAIL----PTVSTYNLLIHALFLEGKMDEADGMI 399
Query: 288 KRM--------SKTWKKLSTKH---------------------------YTALLKVYADH 312
K M S T+ L + YT+L+ V +
Sbjct: 400 KDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKR 459
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
+ DL +++ G + ++AL+ H G +++A + LLK + P +
Sbjct: 460 NRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFA-LLKEMDKRNIVPDEVT 518
Query: 373 YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY-----INAKTPAYGIRD 427
Y +M + G + ++ M++ G + TL+ Y IN A+ IRD
Sbjct: 519 YNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDIND---AFTIRD 575
Query: 428 RMRADNVFP 436
M + P
Sbjct: 576 EMLSIGFNP 584
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
+P+S + Y L+ N KKA + + M KG T L+ + + ++ K
Sbjct: 408 VPDS----ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMK 463
Query: 146 VADVL---LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
AD L ++ E + L F+ LID + +L +++ M I PD T
Sbjct: 464 AADDLFEKIIREGASPDLIMFN--ALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-- 260
L + G+ E+A +LKEM+ ++ + L+ Y++ G + I S
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Query: 261 -NPWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
NP L A I+ K + + AE + K M
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEM 612
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 144/344 (41%), Gaps = 43/344 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+VY TL+ N V++AE +F MK KG T+ N L+ Y R + K+ + LL
Sbjct: 355 IVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAE 414
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGM--DQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ +K SY LI G+ ++ M D ++ MK GI+P S + + Y
Sbjct: 415 MKDFGLKPNANSYTCLISAYGRQKKMSDMAADAFLK-MKKVGIKPTSHSYTAMIHAYSVS 473
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
G EKA A+ + M + +K T LL + +G + + +IWKL S
Sbjct: 474 GWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMS---------- 523
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
KV+ + F L+ +A + + +D++ + + G
Sbjct: 524 -------EKVKGTQVTF---------------NILVDGFAKQGLFMEARDVISEFGKIGL 561
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ ++ L+ + GG ++ LLK + + +P +Y ++ + + D
Sbjct: 562 QPTVMTYNMLINAYARGG-LDSNIPQLLKEMEALRLRPDSITYSTVIYAFVRVRDFKRAF 620
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
M + GYV ++ L +A ++ K + D+ ++D V
Sbjct: 621 FYHKEMVKSGYVMDISSYRKL-RAILDVK-----VADKNKSDKV 658
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 147/383 (38%), Gaps = 15/383 (3%)
Query: 44 LQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
L L +W+ + + + Y + L+ + R K + +P S FR VY ++
Sbjct: 197 LYLFQWMRSQEPSLVTPKVYTTLFPLLGRARMGDKLMVLFRNLPSSKEFRNVRVYNAAIS 256
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKEN---V 158
+ K A +V+ M+ G C+ ++I ++L D EK N V
Sbjct: 257 GLLYDGRYKDAWKVYESMETDGVLPDHVTCSIMIIGMRKLG-HSAKDAWQFFEKMNQKGV 315
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+ + ++ LI L+ + M+ +GI ++ L Y R E+AE
Sbjct: 316 RWGKEAFGALIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEG 375
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-----NPWLDVCMAAIEA 273
+ EM+ +K T +L+ Y+ + V + L E P + I A
Sbjct: 376 LFVEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESL--LAEMKDFGLKPNANSYTCLISA 433
Query: 274 WGKLNKVEEAEA-VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
+G+ K+ + A F +M K K ++ YTA++ Y+ K + + M G
Sbjct: 434 YGRQKKMSDMAADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKP 493
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ L+ G+ E I K K K ++ +++D +AK+G +
Sbjct: 494 SIETYTTLLDAFRRVGDTETLMKI-WKLMMSEKVKGTQVTFNILVDGFAKQGLFMEARDV 552
Query: 393 FHRMRQVGYVARFKQFQTLVQAY 415
++G + L+ AY
Sbjct: 553 ISEFGKIGLQPTVMTYNMLINAY 575
>gi|302764528|ref|XP_002965685.1| hypothetical protein SELMODRAFT_407276 [Selaginella moellendorffii]
gi|300166499|gb|EFJ33105.1| hypothetical protein SELMODRAFT_407276 [Selaginella moellendorffii]
Length = 949
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/453 (20%), Positives = 190/453 (41%), Gaps = 67/453 (14%)
Query: 14 KYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKL 73
K+ GN LS ++ L R+ Y + ++L E + + + F + + +I++
Sbjct: 133 KWMRRGNCLSSDVLSTIYFWLMKRKRYTEIMKLLEGIRCERLVKFTDMHCVWAIGVISRR 192
Query: 74 RGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
RG+ KAE + +PE R + V L + N + KAE+ +++ T+ +
Sbjct: 193 RGMAKAERFYDSLPEKLRTDRVTVGLFLSVAKENGLAKAEQWLEKIQVH----TTDILDV 248
Query: 134 LLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
+++LY DK +K++ ++ E M+ G+
Sbjct: 249 MMVLYLNRDKH--------------------HKVV--------------EMFERMRGLGL 274
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW---------TCRLLLPLYAE 244
+P T +L K K++ L +EG+ L + T + +Y
Sbjct: 275 QPSVRTYLMLLKC------KDRGAGGLNAIEGEALGAVQTMDVEDPPLRTLNDAMEVYGY 328
Query: 245 LGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM---SKTWKKLS 298
+GK D + +W K S+ +AI A G + +V +A A+ K + S + K
Sbjct: 329 VGKQDGIEELWRSLKRTRSDIHQSSYFSAITALGLVGEVAKARALCKELLAGSDEFTKFE 388
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL- 357
+ +L+VYA + M+ K + +++ P +++L++ ++ + +A L
Sbjct: 389 QNPHALMLEVYARNGMMEKAERILQSKELDRDSFAP--YNSLIQGYMAANNISEALKKLD 446
Query: 358 --LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L A + + + M+++ YA GD+ +++ R ++G + +F ++ Y
Sbjct: 447 DGLAAVPAKSIRLQYKTMMVLLPVYAANGDVEGAKELMRRYTKLGDAGVYNEF---LKVY 503
Query: 416 INAKTPAYGIRDRMRADNVFPNKALAAQVAQVD 448
I+ K +RM+A+ V N+ + ++D
Sbjct: 504 ISRKRHPREFMERMQANGVEGNRETEKLLEELD 536
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 153/365 (41%), Gaps = 10/365 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
+ + +D + K LQ+A+ ++ + + + Y +L+ V+ A+EVF RM
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ---FSYKILIDIKGQSND 177
+G N L+ + V LLLME+ +Y LID ++
Sbjct: 399 VRGIEPNVVTYNSLI--HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 456
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+++ MK++ PD T + L + R + A + +M + T
Sbjct: 457 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFST 516
Query: 238 LLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ Y G D R+ + + +P + + ++ + K+ ++ EA V KRM+K
Sbjct: 517 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 576
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ + YTAL+ + + L+++M +G + + +L+ G++E+A
Sbjct: 577 CQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEAR 636
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
IL + ++ K +Y ++MD + G + + ++ ++Q G R + L++
Sbjct: 637 KILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 696
Query: 415 YINAK 419
K
Sbjct: 697 LCQGK 701
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/353 (18%), Positives = 139/353 (39%), Gaps = 14/353 (3%)
Query: 70 IAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSF 129
+ K R KA Y + + E + + + ++ N + +A F +MK KG +
Sbjct: 104 LCKARNTAKALDYFRSM-ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEW 162
Query: 130 ACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM 188
N L+ + ++ K A +LL M++ + +Y +I + + ++ M
Sbjct: 163 TYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQM 222
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
G P+ T L G ++A +L EM L+ +++ L+ + GK
Sbjct: 223 VENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKI 282
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKH 301
D +++ E N D C + A+ L +++EA +F++M + +
Sbjct: 283 DMALKVF---EDNSNGD-CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVT 338
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+TAL+ L + + +++ M + C + + +L+ + G+V A + K
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV-FKRM 397
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+P +Y ++ + + S + M G + + TL+
Sbjct: 398 IVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDG 450
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 128/334 (38%), Gaps = 30/334 (8%)
Query: 120 KDKGFPVTSFACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
K +GF + N+L L+ +R+D+ +L + F+Y ++I +S
Sbjct: 16 KQQGFDHNVYTYNRLFEALLRARRIDE--TCHILKNGWPPGITPNVFTYAVVIQGLCKSG 73
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT-- 234
DL +++E M+ G PD++ + KA + ME + WT
Sbjct: 74 DLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK-NVITWTIM 132
Query: 235 ----CRL-LLP----LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
C+ LP +A++ K V W I + K++KV A
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTY----------NVLINGFCKVHKVHRAYL 182
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+ K M ++ + Y+ ++ + + L +QM E+GC + ++ L+
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
G +++A LL ++ +P SY +M K G I K+F
Sbjct: 243 RNGLMDEAYE-LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301
Query: 406 KQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
+ TL+ A A + ++MR ++ P+
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPD 335
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 14/300 (4%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V Y ++ C G + +A E+F+ M G N LL + R + A L
Sbjct: 256 VTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFS 315
Query: 153 -MEKENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M ++ F+Y L+D KG DL Q++ M + I P+ T + + Y
Sbjct: 316 EMLYRGIEQDIFTYNTLLDAVCKGGQMDLA--FQIMSEMPRKHIMPNVVTYSTVIDGYAK 373
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM- 268
GR ++A + EM+ ++ R + LL +YA+LG+ ++ + K ES+ +
Sbjct: 374 AGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVT 433
Query: 269 --AAIEAWGKLNKVEEAEAVFKRM--SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
A + +GK K EE + VF+ M + + L T Y+ L+ VY+ + + ++ ++
Sbjct: 434 YNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLT--YSTLIDVYSKGGLYQEAMEVFRE 491
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
++G + + AL+ + G VE A S L + ++ +P +Y I+D + + G
Sbjct: 492 FKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG-IRPNVVTYNSIIDAFGRSG 550
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 111/262 (42%), Gaps = 4/262 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
+ + +LLA C G + A +F+ M +G F N LL + + +A ++
Sbjct: 292 ITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSE 351
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M ++++ +Y +ID ++ L + MK I D + L Y GR
Sbjct: 352 MPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGR 411
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
E+A + KEME +K+ T LL Y + GK ++V R+++ ++ P L
Sbjct: 412 FEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYST 471
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + K +EA VF+ K K Y+AL+ + ++ + +M + G
Sbjct: 472 LIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG 531
Query: 330 CHIGPLAWDALVKLHVEGGEVE 351
+ +++++ G E
Sbjct: 532 IRPNVVTYNSIIDAFGRSGSAE 553
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 142/368 (38%), Gaps = 45/368 (12%)
Query: 134 LLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
++ + RL + ++A +V E T +++ LI G+S +V E MKS G
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250
Query: 193 IEPDSST-QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
++P+ T A++ G +A + EM + ++ R T LL + G +
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310
Query: 252 ARIWK----------LCESNPWLD-VCMAA---------------------------IEA 273
++ + N LD VC I+
Sbjct: 311 RNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDG 370
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K +++EA +F M L Y LL +YA + ++ K+M SG
Sbjct: 371 YAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKD 430
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+ ++AL+ + + G+ E+ + + + + F P +Y ++D Y+K G ++F
Sbjct: 431 AVTYNALLGGYGKQGKYEEVKRVFEEMKAERIF-PNLLTYSTLIDVYSKGGLYQEAMEVF 489
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAFR 451
++ G A + L+ A A D M + + PN + +DAF
Sbjct: 490 REFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSI--IDAFG 547
Query: 452 KTAVSELL 459
++ +E +
Sbjct: 548 RSGSAECV 555
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 184/399 (46%), Gaps = 40/399 (10%)
Query: 34 LRTRRMYGKALQLSEWL--ETNKKLDFIERDYASCLDLIAKLRG----LQKAESYIQKIP 87
LR + + + + EW+ ++ + D I C +L+ G ++AES ++
Sbjct: 142 LRLNKKWDSIILVCEWILRRSSFQPDVI------CFNLLIDAYGQKFRFKEAESLYVQLL 195
Query: 88 ES--FRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--ILYKRLD 142
ES E Y L+ A C+AG ++KAE V M++ + N + ++ ++ +
Sbjct: 196 ESRCVPTEDTYTLLIKAYCMAGL-IEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRKGN 254
Query: 143 KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
++ DV M+++ K T +Y ++I++ G+++ ++ M+S +P+ T
Sbjct: 255 TEQAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTA 314
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL----- 257
L + G EKAE + ++++ D + R G A I+ L
Sbjct: 315 LVNAFAREGLCEKAEEIFEQLQEDGHIDSR------------AGYPYGAAEIFSLMQHMG 362
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
CE + M ++A+G+ +AEAVF+ M + + K + LL Y+ + ++K
Sbjct: 363 CEPDRASYNIM--VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTK 420
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN-KFKPMFSSYMLI 376
+ +VK+M+E+G ++++ L+ G+ K + IL A+ +N S+Y ++
Sbjct: 421 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKIL--AEMENGPCTADISTYNIL 478
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
++ Y K G + E++F +++ + + + + AY
Sbjct: 479 INIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAY 517
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 119/275 (43%), Gaps = 37/275 (13%)
Query: 98 TLLANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK-----VADVLL 151
T L N A + +KAEE+F ++++ G +D + A++
Sbjct: 313 TALVNAFAREGLCEKAEEIFEQLQEDG----------------HIDSRAGYPYGAAEIFS 356
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
LM+ + + SY I++D G++ + + V E MK GI P + +L Y
Sbjct: 357 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRAR 416
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
K EA++KEM + ++ + +L LY LG+ ++ +I E+ P C A I
Sbjct: 417 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP----CTADI 472
Query: 272 EA-------WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+GK +E E +F + + K +T+ + Y+ K+ K ++ ++
Sbjct: 473 STYNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEE 532
Query: 325 MAESGCHIGPLAWDALVKLHVEGGE--VEKADSIL 357
M +SGC P A V L E VE+ S+L
Sbjct: 533 MIDSGC--APDGGTAKVLLSACSSEDQVEQVTSVL 565
>gi|449457361|ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Cucumis sativus]
Length = 858
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 167/408 (40%), Gaps = 53/408 (12%)
Query: 47 SEWLETNKK-LDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFR--GEVVYRTLLANC 103
S W+E NKK + I Y + +D+ +K ++A +++++ E EV ++
Sbjct: 207 SLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLY 266
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLT 161
+KAE F + +CN + Y+ +KKK A V + + +V L+
Sbjct: 267 KKAGEFQKAESFFKKWS---------SCNSMK--YEITNKKKAASVKVESSLHPPHVSLS 315
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
++Y LID G++ L E M EG+ P + T + + G+ ++ +++
Sbjct: 316 TYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQ 375
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVE 281
+ME T +L+ LYA K + ++
Sbjct: 376 KMEELQCPPDTRTYNILISLYA--------------------------------KHDNID 403
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
A F M + + Y LL Y+ M+++ + L+ +M E G I AL
Sbjct: 404 LASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALT 463
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+++++ G +E++ S + Y +D Y +RG I E++F ++
Sbjct: 464 RMYIDAGMLEESWSWFWRFHLAGHMSS--ECYSANIDAYGERGFILEAERVFVSCQEEKK 521
Query: 402 VARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPNKALAAQVAQV 447
+F +++AY + A I D M+++ V P+K + + Q+
Sbjct: 522 CTVL-EFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQI 568
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 31/283 (10%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y I++ G++ ++ + M +GI+P +ST L Y GG KE+A L+ M
Sbjct: 189 YNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERMN 248
Query: 225 GDNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCES--------------------- 260
++ T +++ LY E KA+ + W C S
Sbjct: 249 EQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLH 308
Query: 261 NPWLDVCM----AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
P + + I+ +GK +++EA F+ M K +T + ++ + +H L
Sbjct: 309 PPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLK 368
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
+ L+++M E C ++ L+ L+ + ++ A + + ++ +P SY +
Sbjct: 369 EVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAG-LQPDIVSYRTL 427
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGY-VARFKQFQTLVQAYINA 418
+ Y+ R + EK+ M + G + F Q L + YI+A
Sbjct: 428 LYAYSIRHMVAEAEKLITEMDERGLEIDEFTQ-SALTRMYIDA 469
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 149/381 (39%), Gaps = 69/381 (18%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPES-FRGEVV-YRTLLANCVAGNNVKKAEEVFNR 118
R Y + L AK + A +Y ++ E+ + ++V YRTLL + V +AE++
Sbjct: 387 RTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITE 446
Query: 119 MKDKGFPVTSFACNQLLILY----------------------------KRLDKKKVADVL 150
M ++G + F + L +Y +D +
Sbjct: 447 MDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSANIDAYGERGFI 506
Query: 151 LLMEK------ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
L E+ E K T + ++I G D ++ ++MKS G+ PD + + L
Sbjct: 507 LEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLI 566
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL 264
+ A A LK+M+ L + + P+
Sbjct: 567 QILTGADMPAMALAYLKKMQSAGL----------------------------VSDCIPYS 598
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
V I ++ KL +E A+ +++ M K + Y L+ +AD + + + V
Sbjct: 599 VV----ISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNA 654
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M G + +++L+KL+ + G +++A +Q + ++SS +I D Y++R
Sbjct: 655 MKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMI-DLYSERS 713
Query: 385 DIHSTEKIFHRMRQVGYVARF 405
+ E+IF +++ G F
Sbjct: 714 MVKEAEEIFESLKKKGEANEF 734
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 136/310 (43%), Gaps = 9/310 (2%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILI 169
KA E F M+D + N +L +L ++ V M K N ++ ILI
Sbjct: 144 KAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILI 203
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D +S ++ + + M GI PD+ T ++ R + A + +M+ +
Sbjct: 204 DGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVG 263
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDV----CMAAIEAWGKLNKVEEAE 284
TC LL + L + D+ + +L E + + LDV C+ I + + E+ +
Sbjct: 264 PDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL--IRGLFRAKRYEDVQ 321
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
++++M + K YT ++K A+ + +L+ +M ESG + ++ L+K
Sbjct: 322 LLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGF 381
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
+ G + +A S+ L+ + + F P +Y +++ + G ++IF+ M ++G
Sbjct: 382 CDMGLLSEARSLQLEISRHDCF-PNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPS 440
Query: 405 FKQFQTLVQA 414
F +L+
Sbjct: 441 AVTFNSLIDG 450
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 148/375 (39%), Gaps = 26/375 (6%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
+P++F Y +++ V A +F++MKD G CN LL + LD+
Sbjct: 228 LPDAF----TYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVD 283
Query: 146 VADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
A LL L EK+ L Y LI ++ + + M + ++PD I+
Sbjct: 284 EAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMM 343
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--- 261
K G+ A +L EM + +L+ + ++G + AR +L S
Sbjct: 344 KGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSE-ARSLQLEISRHDC 402
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD--------- 311
P + I + +A+ +F M K S + +L+
Sbjct: 403 FPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHL 462
Query: 312 --HKM-LSKGKDLVKQMAESGCHI-GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
+KM + + L ++++ H+ + +V+ + G + KA IL++
Sbjct: 463 LFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGD-A 521
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGI 425
P +Y ++++ + K G+ + K+F M+ G + TL+ + + AY +
Sbjct: 522 PGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKV 581
Query: 426 RDRMRADNVFPNKAL 440
D+M + P+ A+
Sbjct: 582 FDQMEKNGCTPDAAV 596
>gi|449518091|ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g23020-like [Cucumis sativus]
Length = 859
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 167/408 (40%), Gaps = 53/408 (12%)
Query: 47 SEWLETNKK-LDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFR--GEVVYRTLLANC 103
S W+E NKK + I Y + +D+ +K ++A +++++ E EV ++
Sbjct: 208 SLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEVTMGIVVQLY 267
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLT 161
+KAE F + +CN + Y+ +KKK A V + + +V L+
Sbjct: 268 KKAGEFQKAESFFKKWS---------SCNSMK--YEITNKKKAASVKVESSLHPPHVSLS 316
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
++Y LID G++ L E M EG+ P + T + + G+ ++ +++
Sbjct: 317 TYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQ 376
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVE 281
+ME T +L+ LYA K + ++
Sbjct: 377 KMEELQCPPDTRTYNILISLYA--------------------------------KHDNID 404
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
A F M + + Y LL Y+ M+++ + L+ +M E G I AL
Sbjct: 405 LASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERGLEIDEFTQSALT 464
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+++++ G +E++ S + Y +D Y +RG I E++F ++
Sbjct: 465 RMYIDAGMLEESWSWFWRFHLAGHMSS--ECYSANIDAYGERGFILEAERVFVSCQEEKK 522
Query: 402 VARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPNKALAAQVAQV 447
+F +++AY + A I D M+++ V P+K + + Q+
Sbjct: 523 CTVL-EFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQI 569
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 31/283 (10%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y I++ G++ ++ + M +GI+P +ST L Y GG KE+A L+ M
Sbjct: 190 YNIVLGTLGKAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERMN 249
Query: 225 GDNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCES--------------------- 260
++ T +++ LY E KA+ + W C S
Sbjct: 250 EQGMEPDEVTMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLH 309
Query: 261 NPWLDVCM----AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
P + + I+ +GK +++EA F+ M K +T + ++ + +H L
Sbjct: 310 PPHVSLSTYTYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLK 369
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
+ L+++M E C ++ L+ L+ + ++ A + + ++ +P SY +
Sbjct: 370 EVTFLMQKMEELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAG-LQPDIVSYRTL 428
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGY-VARFKQFQTLVQAYINA 418
+ Y+ R + EK+ M + G + F Q L + YI+A
Sbjct: 429 LYAYSIRHMVAEAEKLITEMDERGLEIDEFTQ-SALTRMYIDA 470
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/381 (20%), Positives = 149/381 (39%), Gaps = 69/381 (18%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPES-FRGEVV-YRTLLANCVAGNNVKKAEEVFNR 118
R Y + L AK + A +Y ++ E+ + ++V YRTLL + V +AE++
Sbjct: 388 RTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITE 447
Query: 119 MKDKGFPVTSFACNQLLILY----------------------------KRLDKKKVADVL 150
M ++G + F + L +Y +D +
Sbjct: 448 MDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSANIDAYGERGFI 507
Query: 151 LLMEK------ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
L E+ E K T + ++I G D ++ ++MKS G+ PD + + L
Sbjct: 508 LEAERVFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLI 567
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL 264
+ A A LK+M+ L + + P+
Sbjct: 568 QILTGADMPAMALAYLKKMQSAGL----------------------------VSDCIPYS 599
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
V I ++ KL +E A+ +++ M K + Y L+ +AD + + + V
Sbjct: 600 VV----ISSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNA 655
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M G + +++L+KL+ + G +++A +Q + ++SS +I D Y++R
Sbjct: 656 MKRDGLSGNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMI-DLYSERS 714
Query: 385 DIHSTEKIFHRMRQVGYVARF 405
+ E+IF +++ G F
Sbjct: 715 MVKEAEEIFESLKKKGEANEF 735
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 128/291 (43%), Gaps = 7/291 (2%)
Query: 130 ACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM 188
CN L+ + R + + A +++ M ++ + ++ +Y LI+ G S + ++ + M
Sbjct: 172 TCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNWREALKLCKKM 231
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
G+ PD T I+ Y +G + KA + + M+G N++ T +++ +LG+
Sbjct: 232 TENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLGQY 291
Query: 249 DQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
++ I+ K E +P + + I + ++E AVF M K + Y
Sbjct: 292 EKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYN 351
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
L+ YA H M + + + SG +++ +L+ + + +KA + + ++
Sbjct: 352 TLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREV-FEMMKR 410
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+K KP SY ++D Y G + ++ M Q G TL+ A
Sbjct: 411 DKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAA 461
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 140/352 (39%), Gaps = 56/352 (15%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TL+ + K+A VFN +K+ G + LL Y R + KK +V +
Sbjct: 348 VSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEM 407
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+++ +K SY +ID G + L +V+ M+ +GI P++ + L R
Sbjct: 408 MKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSR 467
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW----------------- 255
K + +L+ E ++K + + Y +G+ ++ ++
Sbjct: 468 KVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTV 527
Query: 256 ---------KLCESNPWLDVCM-----AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
K CE+ +L M EA+ K+ EAE++F +M
Sbjct: 528 LISGCCKMTKYCEALEFLSEMMDLKIPMTKEAYSS-GKITEAESMFNKMKMAGCSPDVVT 586
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
YT +L Y + K L+++M E +A AL++ +GG+ K
Sbjct: 587 YTMMLHAYNAAEHWKKACALLQEMEEYNIQPDTIACSALMRAFNKGGDPSK--------- 637
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+LI+ ++ + +I ++ IF M V + + ++T ++
Sbjct: 638 ------------VLILAEFMREKEIPLSDAIFFEM--VSACSLLRDWRTTIE 675
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 146/322 (45%), Gaps = 11/322 (3%)
Query: 134 LLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ Y +L D + VL M K+ + T S L++ G++ + V M++ G
Sbjct: 147 LVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALMEAYGRAKQYRKAEAVFHRMQTSG 206
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN---LKEHRWTCRLLLPLYAELGKAD 249
EP T I+ K V G + ++AEA+ +++ + K + +++ +Y + G
Sbjct: 207 PEPSPITYQIILKSLVEGDKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYA 266
Query: 250 QVARIW-KLCESN-PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
Q +++ ++ E P V ++ ++ +E +++ +M + K Y+ L+K
Sbjct: 267 QARKLFAQMSERGIPQSTVTFNSLMSFE--GDYKEVSSIYDQMQRAGLKPDVVSYSLLIK 324
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
Y + + + ++M ++G +++ L+ G VE+A ++ K ++++ +
Sbjct: 325 AYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQTV-FKTMRRHRVE 383
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGI 425
P SY ++ Y D+ EK F R+++ G + TL++ Y ++ +
Sbjct: 384 PDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRV 443
Query: 426 RDRMRADNVFPNKALAAQVAQV 447
+RMR V PN+ + + V
Sbjct: 444 YERMRMQGVEPNQTIFTTIMDV 465
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 172/441 (39%), Gaps = 84/441 (19%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLANC 103
++ EWL T DF E D+ + KL +AE ++ + + +R V+ +T L
Sbjct: 126 EILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALMEA 185
Query: 104 VA-GNNVKKAEEVFNRMKDKG---FPVTS------------------------------F 129
+KAE VF+RM+ G P+T F
Sbjct: 186 YGRAKQYRKAEAVFHRMQTSGPEPSPITYQIILKSLVEGDKYKEAEAIFEDLLSEKRTFF 245
Query: 130 ACNQ-----LLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
+Q ++ +YK+ D + + M + + + ++ L+ +G D +
Sbjct: 246 KPDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQSTVTFNSLMSFEG---DYKEVSS 302
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ G++PD + ++L K Y R+E+A A+ +EM ++ R + +LL +A
Sbjct: 303 IYDQMQRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFA 362
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
G VEEA+ VFK M + + YT
Sbjct: 363 ISG--------------------------------LVEEAQTVFKTMRRHRVEPDLCSYT 390
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
+L Y + + + +++ E G + + L+K + + VEK + + + Q
Sbjct: 391 TMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRVYERMRMQ 450
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY 423
+P + + IMD + + D + F+ M GY K L+ AKTP
Sbjct: 451 G-VEPNQTIFTTIMDVHGRNSDFGNAVIWFNEMETRGYPPDKKAKNILLSL---AKTP-- 504
Query: 424 GIRDRMRADNVFPNKALAAQV 444
++ A+ + N A+ +V
Sbjct: 505 --EEQQEANELTGNGAIQLEV 523
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 242 YAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+ +L K + V+ I + + W D + + A+GKL AE V K M+K +
Sbjct: 115 FKQLKKWNLVSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYRP 174
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ TAL++ Y K K + + +M SG P+ + ++K VEG + ++A++I
Sbjct: 175 TVISQTALMEAYGRAKQYRKAEAVFHRMQTSGPEPSPITYQIILKSLVEGDKYKEAEAIF 234
Query: 358 --LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
L ++++ FKP + +++ Y K GD K+F +M + G F +L+
Sbjct: 235 EDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQSTVTFNSLM 291
>gi|297847014|ref|XP_002891388.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
gi|297337230|gb|EFH67647.1| hypothetical protein ARALYDRAFT_336905 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 34/240 (14%)
Query: 15 YAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLR 74
++E+G+ + + + + N KAL+ SEW+ K + DYA+ L L+ +
Sbjct: 44 WSEQGDQVKPSYVRGVIKNFHDFNQCSKALEASEWMCEQKFFNIFSEDYAARLHLVETVL 103
Query: 75 GLQKAESYIQKIPESFRGEVVYRTLLANCV-AGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
GL++AE + + IPE+ R VY LL + + + KAE F +M+D GF + N
Sbjct: 104 GLEEAEKFFESIPENMRDYSVYDNLLRSYTKSEKTLDKAEATFEKMRDLGFLLKPSPFNS 163
Query: 134 LLILYK--------------------RLDKKKVADVLLLME-------------KENVKL 160
++ LY+ R D K +VL ++ K+ K+
Sbjct: 164 MISLYRHLKKKDMVKKLEREMMENDVRFDSHKELNVLTILSTCKDSMYSVWNYIKKRGKM 223
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
T Y+ I + +D+ G +++ E K G + D S ++L + G K E ++
Sbjct: 224 TDEEYRSRISYLLKLDDVQGAEKLYEEWKPVGPKLDMSIPSLLISRFCEEGNGSKVEELV 283
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 139/360 (38%), Gaps = 44/360 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y+S + + K R + KAE+++++ +P+++ Y L+ + K+A VF
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNW----TYNNLIYGYSSTGQWKEAVRVF 314
Query: 117 NRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ + A N L+ L K K+ DV M + FSY I+++
Sbjct: 315 KEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATK 374
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L M + + M +GI PD T +L K Y + G +KA + EM +K H T
Sbjct: 375 GCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVT- 433
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
M I A ++ K+++A F +M
Sbjct: 434 -------------------------------YMTVIAALCRIGKMDDAMEKFNQMIDQGV 462
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
Y L++ + H L K K+L+ ++ +G + + + +++ + G V A +
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
I P Y ++MD Y G + ++F M G + TLV Y
Sbjct: 523 I-FDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 122/307 (39%), Gaps = 7/307 (2%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ---FSYKILIDI 171
+ +R + G F+ N LL K AD LL M E + +Y +ID
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
+ D+ + + M GI PD T + + +KAEA L++M +
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290
Query: 232 RWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKL---NKVEEAEAVFK 288
WT L+ Y+ G+ + R++K L +A G L K++EA VF
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M+ + YT +L YA L DL M G ++ L+K + G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
++KA I+ + + KP +YM ++ + G + + F++M G V +
Sbjct: 411 MLDKA-MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469
Query: 409 QTLVQAY 415
L+Q +
Sbjct: 470 HCLIQGF 476
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 146/367 (39%), Gaps = 55/367 (14%)
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVV-----YRTLLANCVAGNNVKKAEEVFNRMKD 121
+ +IA L + K + ++K + VV Y L+ ++ KA+E+ + + +
Sbjct: 435 MTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 494
Query: 122 KG--FPVTSFA--CNQLLILYKRLDKKKVADVLLLMEKENVKL--TQFSYKILIDIKGQS 175
G + F N L L + +D + + D+ + NV L Y +L+D
Sbjct: 495 NGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV-----NVGLHPDAVVYNMLMDGYCLV 549
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
+ +V +AM S GIEP+ L Y GR ++ ++ +EM +K
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609
Query: 236 RLLLPLYAELGKADQV-ARIWKLCESNPWLDVCMAAIEAWG------------------- 275
+++ E G+ + ++ ES ++ C +I G
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669
Query: 276 --------KLN----------KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
LN +VEEA+ +F +S++ Y+ ++ ++ +
Sbjct: 670 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEE 729
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+D+ M +GC + +V+ ++ E+ +A + L K ++N F + ML++
Sbjct: 730 AEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN-FSLEHLTAMLLV 788
Query: 378 DQYAKRG 384
D ++ +G
Sbjct: 789 DLFSSKG 795
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 156/362 (43%), Gaps = 11/362 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y ++ KL+ QKAES + + + S V+ L+ ++A +FN M
Sbjct: 777 YIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMM 836
Query: 121 DKGFPVTSFACN---QLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
G T + N Q LI+ +RL++ V V+ ++ +K+++ S + ++ Q+ +
Sbjct: 837 RDGPSPTVDSVNGLLQALIVDRRLNELYV--VIQELQDMGLKISKSSILLTLEAFAQAGN 894
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L + ++ MK+ G P I+ + R E ML EME + C
Sbjct: 895 LFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNS 954
Query: 238 LLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+L LY + + I++ + P + I + + + EE ++ +M
Sbjct: 955 ILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLG 1014
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y +L+ + +M + ++L +++ +G + + ++K + G+ KA+
Sbjct: 1015 LEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAE 1074
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ LL +++ +P S+ L+M Y K G E + +R G V + +++ A
Sbjct: 1075 N-LLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDA 1133
Query: 415 YI 416
Y+
Sbjct: 1134 YL 1135
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 114/276 (41%), Gaps = 5/276 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLM 153
VYR +L V+ E + M++ GF CN +L LY + D K + + +
Sbjct: 916 VYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDFKSMGIIYQKI 975
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ ++K + +Y LI + + ++ M+S G+EP T L +
Sbjct: 976 QDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMY 1035
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAA 270
E+AE + +E+ + K R L++ Y G KA+ + I K P +
Sbjct: 1036 EQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLL 1095
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ ++GK + EEAE V K + T L T Y++++ Y G + + +M E+G
Sbjct: 1096 MVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGI 1155
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
W ++ +A +LL A Q F
Sbjct: 1156 EPDHRIWTCFIRAATLSEGTNEA-IVLLNALQDAGF 1190
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 126/310 (40%), Gaps = 38/310 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y TL++ C +N+++A VF+ M+ S C L
Sbjct: 322 ITYNTLISACSRESNLEEAVAVFSDME-------SHRCQPDL------------------ 356
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
++Y +I + G+ +++ + ++S+G PD+ T L + G
Sbjct: 357 ---------WTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNT 407
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAA 270
EK + +EM + T ++ +Y + G+ DQ +I++ +S NP
Sbjct: 408 EKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVL 467
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I++ GK +KVEEA V M K + Y+AL+ YA + ++ M SG
Sbjct: 468 IDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGI 527
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
LA+ ++ + E++KA + + ++ F P Y ++M + +
Sbjct: 528 KPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREG-FTPDNGLYEVMMHALVRENMWDVVD 586
Query: 391 KIFHRMRQVG 400
+I M ++
Sbjct: 587 RIIRDMEELS 596
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 101/268 (37%), Gaps = 33/268 (12%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKIL 168
+KAEE+F ++ KGF + N LL + R + +KV D+ M K + +Y +
Sbjct: 373 RKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTI 432
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I + G+ Q+ MKS G PD+ T +L + E+A ++ EM +
Sbjct: 433 IHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGV 492
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
K P L A I A+ K K EEAE F
Sbjct: 493 K--------------------------------PTLHTYSALICAYAKAGKREEAEETFN 520
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M ++ K Y+ +L + + K L +M G ++ ++ V
Sbjct: 521 CMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVREN 580
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLI 376
+ D I+ ++ + P S +L+
Sbjct: 581 MWDVVDRIIRDMEELSGMNPQVISSVLV 608
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/328 (17%), Positives = 135/328 (41%), Gaps = 7/328 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL---ILYKRLDKKKVADVLL 151
VY ++ K +E+ + M+++G + N L+ + ++ +L
Sbjct: 251 VYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLN 310
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ + ++ +Y LI + ++L V M+S +PD T + Y
Sbjct: 311 EVRRSGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCA 370
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA-- 269
R KAE + KE+E T LL ++ G ++V I + + M
Sbjct: 371 RARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYN 430
Query: 270 -AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I +GK + ++A +++ M + + YT L+ + + +++ +M ++
Sbjct: 431 TIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDA 490
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + AL+ + + G+ E+A+ +++ KP +Y +++D + + ++
Sbjct: 491 GVKPTLHTYSALICAYAKAGKREEAEETF-NCMRRSGIKPDRLAYSVMLDFFLRFNEMKK 549
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYI 416
++H M + G+ ++ ++ A +
Sbjct: 550 AMGLYHEMIREGFTPDNGLYEVMMHALV 577
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 140/340 (41%), Gaps = 23/340 (6%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
FR +Y +L+ C+ A ++F+ M+ G + ++ +Y R+D + A
Sbjct: 699 FRSCTMYESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHH 758
Query: 150 LLLMEKENVKLTQFSYKILIDI---KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
LL ++N + + IDI G+ + +V +++ + D L
Sbjct: 759 LLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHA 818
Query: 207 YVSGGRKEKAEAMLKEMEGD----------NLKEHRWTCRLLLPLYAELGKADQVARIWK 256
Y G E+A A+ M D L + R L LY + + + K
Sbjct: 819 YAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMG--LK 876
Query: 257 LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH-YTALLKVYADHKML 315
+ +S+ L +EA+ + + E + ++ M K T H Y +L++ K +
Sbjct: 877 ISKSSILL-----TLEAFAQAGNLFEVQKIYNGM-KAAGYFPTMHVYRIMLRLLCKCKRV 930
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML 375
+ ++ +M E+G ++++KL++ G E K+ I+ + Q KP +Y
Sbjct: 931 RDVETMLCEMEEAGFQPDLQICNSILKLYL-GIEDFKSMGIIYQKIQDASLKPDEETYNT 989
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
++ Y + + ++MR +G + +++L+ A+
Sbjct: 990 LIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAF 1029
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 75/183 (40%), Gaps = 3/183 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + + + +KAE +++ F V Y +LL N +K ++ M
Sbjct: 359 YNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMV 418
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
+GF N ++ +Y + + A + M+ +Y +LID G+++ +
Sbjct: 419 KRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVE 478
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V+ M G++P T + L Y G++E+AE M +K R ++L
Sbjct: 479 EAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVML 538
Query: 240 PLY 242
+
Sbjct: 539 DFF 541
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/156 (18%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
+ V + +E +GKL ++AE++ + + K+ K + AL+ YA + + +
Sbjct: 774 ISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFN 833
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
M G + + L++ + + + ++++ Q K SS +L ++ +A+
Sbjct: 834 TMMRDGPSPTVDSVNGLLQALIVDRRLNEL-YVVIQELQDMGLKISKSSILLTLEAFAQA 892
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
G++ +KI++ M+ GY ++ +++ K
Sbjct: 893 GNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCK 928
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK N+ A +F R + + + Y A++ VYA + SK K+L+ M E GC
Sbjct: 226 GKANQEALAVEIFARAESSVGD-TVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDL 284
Query: 335 LAWDALVKLHVEGGEVEKADSI-LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++++ L+ ++ G +E ++ LL +++ +P +Y ++ ++ ++ +F
Sbjct: 285 VSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISACSRESNLEEAVAVF 344
Query: 394 HRM 396
M
Sbjct: 345 SDM 347
>gi|302763321|ref|XP_002965082.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
gi|300167315|gb|EFJ33920.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
Length = 731
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 149/330 (45%), Gaps = 10/330 (3%)
Query: 95 VYRTLLANCVAGNNVKKAE--EVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL- 151
Y T+++ G + K AE +VF M G +T+ N ++ +Y + + + A++L+
Sbjct: 231 TYNTMIS--FYGEHAKFAEGSKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLVT 288
Query: 152 -LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
+ ++++ +Y LI++ +++ L + +E M+ G+ D T L Y +
Sbjct: 289 NMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSADQVTFRTLISAYAAN 348
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC--M 268
KAEA+++EMEG + +++ +Y + +++ S L+V +
Sbjct: 349 NVVWKAEALVQEMEGSGFLIDQAMYTVMIAMYVRARDVPKAESVFRFLHSRGGLEVSTYV 408
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
++ + + +++A VF+ ++K + Y ++K Y + + + M +
Sbjct: 409 GVMDVYAEHKCLDQAREVFE-LAKNAGLKTPSLYNVMMKAYGACDRFTDAVTVFEAMEKD 467
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G ++++L++L +G +E +L+ + FKP +S ++ Y G +
Sbjct: 468 GASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAG-FKPSLASCSSVVSFYGDMGRVRE 526
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
E++F M G A + L+ AY A
Sbjct: 527 AERVFKEMLASGVEADVICYSALLNAYAEA 556
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 178/411 (43%), Gaps = 25/411 (6%)
Query: 6 ISIHSTLTKYAEEGN---DLSRAEIALAMANLRTR-RMYGKALQL--SEWLETNKKLDFI 59
IS + K+AE ++ +A + L +YGKA + +E L TN K
Sbjct: 236 ISFYGEHAKFAEGSKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLVTNMKQ--- 292
Query: 60 ERD-------YASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVK 110
+D Y S +++ K L+ ++++ +S +V +RTL++ A N V
Sbjct: 293 RKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSADQVTFRTLISAYAANNVVW 352
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
KAE + M+ GF + ++ +Y R A+ + L +Y ++D
Sbjct: 353 KAEALVQEMEGSGFLIDQAMYTVMIAMYVRARDVPKAESVFRFLHSRGGLEVSTYVGVMD 412
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ + L +V E K+ G++ S ++ K Y + R A + + ME D
Sbjct: 413 VYAEHKCLDQAREVFELAKNAGLK-TPSLYNVMMKAYGACDRFTDAVTVFEAMEKDGASP 471
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVF 287
+ + L+ L + + + R+ L ++ P L C + + +G + +V EAE VF
Sbjct: 472 NEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVF 531
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
K M + + Y+ALL YA+ + + + + +G + + +++KL+
Sbjct: 532 KEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNL 591
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
G + +A+ I ++ ++ P + +++ Y K G E++F M++
Sbjct: 592 GLIAEAEKIY---EEISRLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQR 639
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 13/218 (5%)
Query: 211 GRKEKAEAMLK---EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDV 266
GR K E + K EM G+ + +T +L+ ++ G D+ R ++ + ES D
Sbjct: 128 GRAAKWELLQKYWSEMLGERVPPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDE 187
Query: 267 CMAA--IEAWGKLNKVEEAEAVFKRM-------SKTWKKLSTKHYTALLKVYADHKMLSK 317
M + + + +EEAE F + T + + + Y ++ Y +H ++
Sbjct: 188 VMVSTYMNLQRRFGDLEEAEKAFWGLFSENLVDGTTKRPENPETYNTMISFYGEHAKFAE 247
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
G + +M ++G + + ++A++ ++ + G +A+ ++ +Q+ P ++Y ++
Sbjct: 248 GSKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLVTNMKQRKDCCPDVATYNSLI 307
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ Y K + RMR G A F+TL+ AY
Sbjct: 308 EMYVKNDKLELVSGCLERMRDSGVSADQVTFRTLISAY 345
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 137/338 (40%), Gaps = 57/338 (16%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS---STQAILAKHYVS 209
M E V T F+Y IL+D+ G++ + M G+EPD ST L + +
Sbjct: 143 MLGERVPPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRF-- 200
Query: 210 GGRKEKAEAMLKEMEGDNL-------KEHRWTCRLLLPLYAELGKADQVARIW-KLCESN 261
G E+AE + +NL E+ T ++ Y E K + ++++ ++ ++
Sbjct: 201 -GDLEEAEKAFWGLFSENLVDGTTKRPENPETYNTMISFYGEHAKFAEGSKVFAEMMKAG 259
Query: 262 PWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSK---------TWKKLSTKH--------- 301
L A I +GK + EAE + M + T+ L +
Sbjct: 260 VELTTVTFNAMIHVYGKAGRTREAELLVTNMKQRKDCCPDVATYNSLIEMYVKNDKLELV 319
Query: 302 ------------------YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+ L+ YA + ++ K + LV++M SG I + ++ +
Sbjct: 320 SGCLERMRDSGVSADQVTFRTLISAYAANNVVWKAEALVQEMEGSGFLIDQAMYTVMIAM 379
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+V +V KA+S+ + + S+Y+ +MD YA+ + ++F + G +
Sbjct: 380 YVRARDVPKAESVFRFLHSRGGLE--VSTYVGVMDVYAEHKCLDQAREVFELAKNAG-LK 436
Query: 404 RFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPNKA 439
+ +++AY + T A + + M D PN+A
Sbjct: 437 TPSLYNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEA 474
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/294 (19%), Positives = 124/294 (42%), Gaps = 3/294 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
Y +D+ A+ + L +A + + + +Y ++ A + A VF M+
Sbjct: 407 YVGVMDVYAEHKCLDQAREVFELAKNAGLKTPSLYNVMMKAYGACDRFTDAVTVFEAMEK 466
Query: 122 KGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G + N L+ +L K + + VL+L++ K + S ++ G +
Sbjct: 467 DGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVRE 526
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
++V + M + G+E D + L Y G +A+ L ++ ++
Sbjct: 527 AERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMK 586
Query: 241 LYAELGKADQVARIWK-LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
LY+ LG + +I++ + +P + + + K EAE +F+ M + L+
Sbjct: 587 LYSNLGLIAEAEKIYEEISRLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNE 646
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
T +LK+Y + + +G D+ + M+ A++ ++ ++V+ G + +A
Sbjct: 647 VACTMMLKLYREAGKIEQGLDVARVMSRRFLITDARAFNVVIAMYVKAGLMREA 700
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/241 (17%), Positives = 107/241 (44%), Gaps = 6/241 (2%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLL 151
E + +L+ G ++ + V +K GF + +C+ ++ Y + + + A+ V
Sbjct: 473 EASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFK 532
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M V+ Y L++ ++ Q ++++K+ G PD+ + K Y + G
Sbjct: 533 EMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLG 592
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE-SNPWLD--VCM 268
+AE + +E+ L + +L LY + G + ++++ + P L+ C
Sbjct: 593 LIAEAEKIYEEI--SRLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACT 650
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
++ + + K+E+ V + MS+ + + + ++ +Y ++ + + +K+M +
Sbjct: 651 MMLKLYREAGKIEQGLDVARVMSRRFLITDARAFNVVIAMYVKAGLMREALEALKEMRRA 710
Query: 329 G 329
G
Sbjct: 711 G 711
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 13/329 (3%)
Query: 94 VVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLL 151
V Y T++ +C+ G ++A +F MKDKG + N + L K ++ + ++
Sbjct: 252 VTYNTIIHGHCLRGK-FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLIC 310
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + + +Y LID DL + M S+GI T + G
Sbjct: 311 KMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEG 370
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES------NPWLD 265
R A+ M+KEM + T +L+ Y G A R + L + P L
Sbjct: 371 RMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDA---KRAFGLLDEMVGKGIQPTLV 427
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ I GK N+++EA+A+F ++ + + AL+ + + + + L+K+M
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ ++ L++ + G+VE+A LL ++ KP SY ++ Y+KRGD
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQ-LLDEMKRRGIKPDHISYNTLISGYSKRGD 546
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ ++ M G+ + L+Q
Sbjct: 547 MKDAFRVRDEMMTTGFDPTILTYNALIQG 575
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 136/309 (44%), Gaps = 5/309 (1%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILI 169
+A E F +K+KGF CNQ+L L+ +L++ ++A VL M + N++ + +++ I+I
Sbjct: 164 EALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMI 223
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
++ + L + + M++ G++P+ T + + G+ ++A + + M+ L+
Sbjct: 224 NVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLE 283
Query: 230 EHRWTCRLLLPLYAELGKADQVAR-IWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAV 286
+T + + G+ ++ + I K+ E P A I+ + +++A A
Sbjct: 284 PDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAY 343
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
M S Y + + +++K+M E G + + L+ +
Sbjct: 344 RDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCR 403
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
G+ ++A LL +P +Y ++ KR + + +F +++Q G +
Sbjct: 404 CGDAKRAFG-LLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDII 462
Query: 407 QFQTLVQAY 415
F L+ +
Sbjct: 463 VFNALIDGH 471
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 128/313 (40%), Gaps = 44/313 (14%)
Query: 89 SFRGEVVYRTLLANCVAGN----------NVKKAEEVFNRMKDKGFPVTSFACNQLLILY 138
++R E++ + ++A+ V N + A+ + M++KG + N L+ Y
Sbjct: 342 AYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGY 401
Query: 139 KRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
R D K+ +L M + ++ T +Y LI + G+ N + D + ++ EG+ PD
Sbjct: 402 CRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDI 461
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
L + + G ++A +LKEM DN+K +LP D++
Sbjct: 462 IVFNALIDGHCANGNIDRAFQLLKEM--DNMK--------VLP--------DEITY---- 499
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
++ + + KVEEA + M + K Y L+ Y+ +
Sbjct: 500 ----------NTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKD 549
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ +M +G L ++AL++ + E E A+ LLK P S+Y+ I+
Sbjct: 550 AFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEE-LLKEMVSKGITPDDSTYLSII 608
Query: 378 DQYAKRGDIHSTE 390
+ D+ +
Sbjct: 609 EAMETVDDLEGND 621
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 80/198 (40%), Gaps = 6/198 (3%)
Query: 237 LLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL+ Y EL K ++ + L + P ++ C + + KLN+ + A ++ M +
Sbjct: 151 LLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRM 210
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ S + ++ V L K K+ + M G + ++ ++ H G+ ++A
Sbjct: 211 NIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA 270
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ + + +P +Y + K G + + +M + G V + L+
Sbjct: 271 -RVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALID 329
Query: 414 AYINAK--TPAYGIRDRM 429
Y N AY RD M
Sbjct: 330 GYCNKGDLDKAYAYRDEM 347
>gi|186478661|ref|NP_564088.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|8778424|gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana]
gi|332191742|gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 725
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 150/358 (41%), Gaps = 34/358 (9%)
Query: 38 RMYGKALQLSEWLETNKKLDFIERD---------YASCLDLIAKLRGLQKAESYIQKIPE 88
++YG L +W+E K+ E + C ++ KL LQ+ + P
Sbjct: 281 KIYGLELSDPKWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKLESLQEGDD-----PS 335
Query: 89 SFRGE---------VVYRTLLANCVAGNN---VKKAEEVFNRMKDKGFPVTSFACNQLLI 136
E V + L+ GN +K AE V + +K F + ++L+
Sbjct: 336 GLLAEWAELLEPNRVDWIALINQLREGNTHAYLKVAEGVLD---EKSFNASISDYSKLIH 392
Query: 137 LYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
++ + + + V +L M + + + L+ + +S + + E +KS G+ P
Sbjct: 393 IHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRP 452
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI- 254
D + YV+ G+ + E ++KEM+ LK LL YA++G A+ A I
Sbjct: 453 DEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGIS 512
Query: 255 --WKLCESNPW-LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
+ P + +EA+GK +V++A++ F M K K K L++ Y
Sbjct: 513 SSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKG 572
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM 369
L K L+ Q+ + G IG + + LV G +E+A+ +L+K Q + P
Sbjct: 573 ENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAPPF 630
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 3/181 (1%)
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ ++A+ + V RI K N P + A + + K E A F+ +
Sbjct: 390 LIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYG 449
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ K Y A++ Y + G+ L+K+M + AL++ + + G+ A
Sbjct: 450 LRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAA 509
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
I Q + F +Y L ++ Y K G + + F MR++G+ K LV+A
Sbjct: 510 GISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRA 569
Query: 415 Y 415
Y
Sbjct: 570 Y 570
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ L+ +H + +E + IL K Q F + ++ L+ Y+K G+ + F +
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALV-HMYSKSGNFERATEAFENL 445
Query: 397 RQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+ G K ++ ++ Y+NA P G R
Sbjct: 446 KSYGLRPDEKIYEAMILGYVNAGKPKLGER 475
>gi|449438490|ref|XP_004137021.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
mitochondrial-like [Cucumis sativus]
Length = 334
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 5/248 (2%)
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
+M++ GF T + N +L LY L K +K+A++L ME+ + +F+Y I ++ ++
Sbjct: 3 KMREVGFMKTPLSYNAMLNLYAHLGKHEKLAELLKEMEEMGIGPDRFTYNIRMNAYAAAS 62
Query: 177 DLTGMDQVVEAMKSEG-IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
D+T M++++ M+++ + D T ++ Y G E + MLK+ E + +W
Sbjct: 63 DITNMEKLLSKMEADPLVATDWHTYFVVGNGYFKAGLSENSILMLKKAEQFIGDKQKWLA 122
Query: 236 -RLLLPLYAELGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
+ L+ LYA +G D+V R+W L + + + I + KL+ ++ AE + K
Sbjct: 123 YQYLMTLYAAIGNKDEVYRVWNLYTNLQKRFNSGYLCIISSLMKLDDIDGAERILKEWES 182
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ ++ Y + K + + ++ E+G WD L + G K
Sbjct: 183 GDTSFDFRIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEANTWDLLASGYHSNGLTNK 242
Query: 353 ADSILLKA 360
L KA
Sbjct: 243 VAETLKKA 250
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 158/386 (40%), Gaps = 44/386 (11%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDK-KKVADVLLL 152
Y +++ + KK VF R+K+ F + S+ C L+ LY ++ K K +
Sbjct: 412 YHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGC--LINLYIKIGKVTKAIAISKE 469
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME +K +Y +LI +D + E M G++PD + +L + + G
Sbjct: 470 MESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGN 529
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
++A +L++M+ + ++ R ++ +A G + I L + P + A
Sbjct: 530 MDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNA 589
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K N+VE A +V +MS + YT +++ YA + + K + ++ E G
Sbjct: 590 LIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGG 649
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSI--------------------------------- 356
+ ++ L++ + G ++ A ++
Sbjct: 650 LKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAA 709
Query: 357 -LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L+K +++ P +Y ++ K GD+ +K+ M VG K + TL++ +
Sbjct: 710 DLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGW 769
Query: 416 INAKTPAYGIR--DRMRADNVFPNKA 439
A P ++ + M+ + P++A
Sbjct: 770 AKASLPDRALKSFEEMKLAGLKPDEA 795
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 145/323 (44%), Gaps = 36/323 (11%)
Query: 94 VVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLL 151
++Y ++ A+C +GN + +AEE+ M++ G A + ++ Y + D+KK V
Sbjct: 375 IIYSNIIHAHCQSGN-MDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFE 433
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+++ + SY LI++ + +T + + M+S GI+ ++ T ++L ++
Sbjct: 434 RLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLH 493
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
A ++ +EM L+ R LL+ + ++G D+ R
Sbjct: 494 DFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIR------------------ 535
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ ++M K + S + + +++ +A + + +++ M SGC
Sbjct: 536 --------------ILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCA 581
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ ++AL+ ++ +VE+A S+L K P +Y +IM YA GDI +
Sbjct: 582 PTVMTYNALIHGLIKKNQVERAVSVLNKMSIAG-ITPNEHTYTIIMRGYAANGDIGKAFE 640
Query: 392 IFHRMRQVGYVARFKQFQTLVQA 414
F ++++ G ++TL++A
Sbjct: 641 YFTKIKEGGLKLDVYIYETLLRA 663
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 136/347 (39%), Gaps = 43/347 (12%)
Query: 134 LLILY--KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+I+Y KR DK M ++ F + L+ + D+ G+ VE MK+E
Sbjct: 274 LMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAE 333
Query: 192 GIEPDSSTQAILAKHY-----------------------------------VSGGRKEKA 216
GIE T +I+ + G ++A
Sbjct: 334 GIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRA 393
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEA 273
E +++EME D + ++ Y + + ++ K C P + I
Sbjct: 394 EELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINL 453
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K+ KV +A A+ K M K + K Y+ L+ + + + ++M +SG
Sbjct: 454 YIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPD 513
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++ L++ + G +++A IL K Q++ + +P ++ I++ +A GD+ I
Sbjct: 514 RAIYNLLIEAFCKMGNMDRAIRILEKMQKE-RMQPSNRAFRPIIEGFAVAGDMKRALNIL 572
Query: 394 HRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNK 438
MR+ G + L+ I N A + ++M + PN+
Sbjct: 573 DLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNE 619
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 104/250 (41%), Gaps = 4/250 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLME 154
+R ++ ++K+A + + M+ G T N L+ L K+ ++ VL M
Sbjct: 552 FRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMS 611
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + +Y I++ + D+ + +K G++ D L + GR +
Sbjct: 612 IAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQ 671
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAI 271
A A+ +EM + + + +L+ +A G + A + K + + P + + I
Sbjct: 672 SALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYI 731
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
A K ++ A+ V + M+ K + K YT L+K +A + + ++M +G
Sbjct: 732 NACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLK 791
Query: 332 IGPLAWDALV 341
A+ LV
Sbjct: 792 PDEAAYHCLV 801
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 1/159 (0%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLL 151
E Y ++ A ++ KA E F ++K+ G + + LL + + + A V
Sbjct: 619 EHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTR 678
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + + F Y ILID + D+ +++ MK +G+ P+ T G
Sbjct: 679 EMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAG 738
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
++A+ +++EM LK + T L+ +A+ D+
Sbjct: 739 DMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDR 777
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 8/253 (3%)
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
CL L + K + +P + Y T++ + + +A E+F MK+ G
Sbjct: 148 CLSLFDTASQILKEMKAVNCLPNV----ISYTTMINSLGRSGRLDEAVELFEEMKELGRS 203
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
S+ N LL Y R + + A L + ME E ++Y +ID+ G+ + V
Sbjct: 204 PNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRGGLFAEAEGV 263
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
M+ +G PD T + Y R+ +A +LK M+ WT +LL +
Sbjct: 264 FLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTYNILLDAAGK 323
Query: 245 LGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
G A + +I+ K +P L A I +G+L EEAE + M T +
Sbjct: 324 AGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRATGCVPNATA 383
Query: 302 YTALLKVYADHKM 314
Y L+ Y+ H M
Sbjct: 384 YCGLMNSYSHHGM 396
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/420 (20%), Positives = 158/420 (37%), Gaps = 53/420 (12%)
Query: 31 MANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESF 90
M L R +ALQ+ +L+ + + + E + + + ++ + L A + + ++
Sbjct: 1 MKELEIRGARRQALQVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAG 60
Query: 91 RGEVV--YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVA 147
V Y LL+ +K+A +F MK+KG N L+ KR ++
Sbjct: 61 VAPSVHAYTALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKR--AYRLP 118
Query: 148 DVLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
D++ L M++ V+ +Y +++ + Q+++ MK+ P+ + +
Sbjct: 119 DLVGLFEEMKQAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMI 178
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--- 261
GR ++A + +EM+ + WT LL YA G+ ++ ++ E
Sbjct: 179 NSLGRSGRLDEAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCI 238
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P L I+ G+ EAE VF M + Y +L Y+ + +DL
Sbjct: 239 PDLYTYNTVIDMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDL 298
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+K M +GC P +Y +++D
Sbjct: 299 LKTMKRAGC------------------------------------TPDLWTYNILLDAAG 322
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDR----MRADNVFPN 437
K G +IFH ++ G+ F L+ Y + + +R MRA PN
Sbjct: 323 KAGSASEAMQIFHELKAAGHSPNLVSFSALINMY--GRLGYFEEAERAWVEMRATGCVPN 380
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 129/306 (42%), Gaps = 3/306 (0%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILID 170
AE F M++ G LL + R + + M K T+ +Y++ I+
Sbjct: 126 AELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYIN 185
Query: 171 IKGQSNDLTGMDQVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
++ +++ + + +S +PD+ ++ Y G+ + +A+ ++M+G +
Sbjct: 186 ALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVP 245
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
T L+ + A+ R + + P + I A+ K +VEEA VF+
Sbjct: 246 MTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFRE 305
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
M + + S Y LL YA K + + L K M + C ++ L+ + G
Sbjct: 306 MVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGN 365
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
++KA+ LLK +Q +P +Y +M Y DI++ + F +++ G F
Sbjct: 366 MKKAER-LLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFT 424
Query: 410 TLVQAY 415
LV+ +
Sbjct: 425 LLVRTF 430
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 136/313 (43%), Gaps = 16/313 (5%)
Query: 135 LILYKRLDK-KKVADVLLLMEKE---NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
LI ++L+K V +VLL ++++ N + F+ ++I G+ + M+
Sbjct: 78 LIRLRQLNKWTMVLEVLLWLKQQDWWNFGIHDFN--LMIAAYGKLGQPGIAELSFTEMRE 135
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
G+EP+ + L + + G +AE++ +EM T ++ + + + +
Sbjct: 136 VGLEPNVACFTSLLEAHARTGNFVRAESIYQEMLKTGPAPTEVTYQVYINALCKAERFND 195
Query: 251 VARIWKL----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
RI+K E+ P + + +GK K E +A+F++M ++ + +L+
Sbjct: 196 AERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTFNSLM 255
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
A K ++ + ++ M + + + L+ + + VE+A ++ + +
Sbjct: 256 ---AFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAH-VVFREMVASGL 311
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYG 424
+P +Y ++D YAK ++ E +F M Q + + TL+ AY N A
Sbjct: 312 RPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAER 371
Query: 425 IRDRMRADNVFPN 437
+ RM+ + PN
Sbjct: 372 LLKRMKQAGLEPN 384
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 108/280 (38%), Gaps = 14/280 (5%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV---VYRTLLANCVAGNNVKKAEEVF 116
E Y ++ + K AE + + ES + +Y +L + + +F
Sbjct: 177 EVTYQVYINALCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALF 236
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDKKKVADV---LLLMEKENVKLTQFSYKILIDIKG 173
+MK G P+T N L+ +K VAD L M+ +K +Y LI+
Sbjct: 237 RQMKGAGVPMTVVTFNSLMAF-----QKTVADAEACLRHMQAAKIKPDVITYTGLINAYS 291
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
++ + V M + G+ P L Y E AE++ K M D +
Sbjct: 292 KARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIR 351
Query: 234 TCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
+ LL YA G KA+++ + K P + ++ + ++ + F+ +
Sbjct: 352 SYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDL 411
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
K K ++ +T L++ + + K+M +SGC
Sbjct: 412 QKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGC 451
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 20/305 (6%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
++L F K L+ + N + + + MKS G P+ + ++L Y G R AE
Sbjct: 174 LQLCNFLLKCLV----ERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAE 229
Query: 218 A--MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCE-SNPWLDVCM-A 269
A +L EME +K + T L L + QVA W LC+ NP C A
Sbjct: 230 AFELLSEMEMKGVKPNAATYGTYL---YGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNA 286
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + + +V+EA VF M K T Y+ L+ + G DL+ +MA +G
Sbjct: 287 VIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNG 346
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+++ +L+ G+VE A + + ++Q FK Y +I++ + +I
Sbjct: 347 IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQG-FKHDHIVYSIILNGCCQHLNIEVV 405
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQV 447
+++ M +V + +L+ A+ + T A G+ + M V PN + V
Sbjct: 406 CDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPN--VVTCTILV 463
Query: 448 DAFRK 452
D F K
Sbjct: 464 DGFGK 468
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 65/327 (19%), Positives = 131/327 (40%), Gaps = 13/327 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLME 154
Y T L V A + +G P ++ N ++ + R + ++ +V M+
Sbjct: 249 YGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMK 308
Query: 155 KENVKLTQFSYKILID-IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
K + SY IL+D + Q + LTG D +VE M GI P + + L G+
Sbjct: 309 KGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVE-MARNGIAPTLVSYSSLLHGLCRAGKV 367
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDV--CMAA 270
E A + + +E K ++L + + V +W + N D +
Sbjct: 368 ELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSL 427
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+ + + +A VF+ M + + T L+ + +M+ + + ++ + G
Sbjct: 428 IYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFG- 486
Query: 331 HIGPLAWDALVKLHVEG-GEVEKADSI--LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
I P + ++ + G +V K+D + + + + P Y +I+D + K +
Sbjct: 487 -IVPNL--CMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLP 543
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
++FH+M G + +L+
Sbjct: 544 EAFRLFHKMLDEGTKPNVFTYTSLING 570
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 118/326 (36%), Gaps = 40/326 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP----VTSFACNQLLILYKRLDKKKVADV 149
V Y +LL V+ A E+F R++++GF V S N + L+ + V D+
Sbjct: 352 VSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCC---QHLNIEVVCDL 408
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M N ++Y LI + +LT V E M G+ P+ T IL V
Sbjct: 409 WNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTIL----VD 464
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
G KE+ M+ E + L K Q + LC
Sbjct: 465 GFGKER---MIDEA------------------FLFLHKVRQFGIVPNLCMYR-------V 496
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K+NK + +F M K T Y+ ++ + L + L +M + G
Sbjct: 497 IINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEG 556
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +L+ + + + L K P Y ++ Y KR ++ +
Sbjct: 557 TKPNVFTYTSLINGLCHDDRLPEVVT-LFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAA 615
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
+IF M ++G A + L+ +
Sbjct: 616 LEIFRGMGKLGLSADAFLYTCLIGGF 641
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 141/333 (42%), Gaps = 9/333 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
VY +L C+ + +AE + RM G P+ F+ N ++ LY K+ + + V M
Sbjct: 186 VYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRM 245
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+KE ++ ++ LI + + Q+ M + PD+ T L Y G
Sbjct: 246 DKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNI 305
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD--VCMAA 270
E+A + EME + T +L E GK +V ++ ++ E D C
Sbjct: 306 EEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTL 365
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+ K + A V K+M ++ +L+ Y AL+ + K L + K+ QM ++G
Sbjct: 366 INAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGF 425
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK--FKPMFSSYMLIMDQYAKRGDIHS 388
+ LV + AD++LL + K P + Y ++ + ++G +
Sbjct: 426 SPNYSVFSWLVDGFCKK---NNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQ 482
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+K+F +M+ G V + TL Y+ P
Sbjct: 483 AQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKP 515
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 120/309 (38%), Gaps = 34/309 (11%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILID 170
A VF++M+ +G + AC LL R A V M + + ++ Y ++
Sbjct: 133 ALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLH 192
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ ++ D + +V M + G+ D + + Y G + +A + M+ + +
Sbjct: 193 VCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGI-- 250
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
+AD V W + I K +V+EA +F M
Sbjct: 251 ----------------RADTVT--WN------------SLIHGLCKYGRVKEAAQLFTEM 280
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
+ YT L+ Y + + L +M +G G ++A+++ E G++
Sbjct: 281 AAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKM 340
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
++ + LL + K + + +++ Y KRG + S K+ +M + G ++
Sbjct: 341 KEVNQ-LLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKA 399
Query: 411 LVQAYINAK 419
L+ + AK
Sbjct: 400 LIHGFCKAK 408
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 96/249 (38%), Gaps = 17/249 (6%)
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
KLRG +A + G Y +L +K+ ++ N M ++ C
Sbjct: 310 KLRGEMEATGMLP-------GVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTC 362
Query: 132 NQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
N L+ Y KR V M + ++L QF+YK LI ++ +L + M
Sbjct: 363 NTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVD 422
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAML---KEMEGDNLKEHRWTCRLLLPLYAELGK 247
G P+ S + L + +K A+A+L E+ L + R L+ G
Sbjct: 423 AGFSPNYSVFSWLVDGFC---KKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGL 479
Query: 248 ADQVARIWKLCESNPWL-DVCMAAIEAWGKLN--KVEEAEAVFKRMSKTWKKLSTKHYTA 304
DQ +++ +S + D + A A+ L K A M+K ++ + Y
Sbjct: 480 VDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIYNC 539
Query: 305 LLKVYADHK 313
L YAD K
Sbjct: 540 LCTSYADEK 548
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 3/180 (1%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P C A + A + A VF M++ +ST Y A+L V ++ + L
Sbjct: 147 PDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEAL 206
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
V +M +G + +++ ++ L+ + G +A + + ++ + ++ ++
Sbjct: 207 VTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEG-IRADTVTWNSLIHGLC 265
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKA 439
K G + ++F M + TL+ Y A A +R M A + P A
Sbjct: 266 KYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVA 325
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 152/364 (41%), Gaps = 40/364 (10%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TLL+ C +AE VF M + G + L+ + +L++ +KV+++L
Sbjct: 253 VTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKE 312
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME SY +L++ QS + V M+ G P+++T +IL Y GR
Sbjct: 313 MESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGR 372
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN---------- 261
+ + EM+ N + + T +L+ ++ E G +V ++ + E N
Sbjct: 373 YDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEG 432
Query: 262 ---------------------------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
P IEA+G+ EEA F M++
Sbjct: 433 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 492
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K + + Y +L++++A + + + ++ +M +SG ++ +++ +GG+ E+A
Sbjct: 493 SKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAI 552
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ ++ + P + ++ Y G + +E+ F ++ +G + + ++
Sbjct: 553 KAYVEMEKA-RCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAV 611
Query: 415 YINA 418
Y A
Sbjct: 612 YAKA 615
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 139/327 (42%), Gaps = 6/327 (1%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
+ Y T++ +C G + ++ +F +M+ +G N LL R A+++
Sbjct: 217 LTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFR 276
Query: 153 MEKENVKLTQFS-YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
E L + Y L++ G+ N L + ++++ M+S G PD ++ +L + + G
Sbjct: 277 TMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSG 336
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCM 268
++A + ++M+G + T +LL LY G+ D V ++ K+ + P
Sbjct: 337 SIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYN 396
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I +G+ +E +F M + + + + Y L+ + K ++ M E
Sbjct: 397 ILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEK 456
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G A+ +++ + + E+A + + KP +Y ++ +AK G
Sbjct: 457 GVVPSSKAYTGVIEAYGQAALYEEA-LVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKE 515
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
+E I +M Q G F +++A+
Sbjct: 516 SEAILLKMGQSGVARNRDTFNGVIEAF 542
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 286 VFKRMSK-TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+FK M + W K + YT ++ V +L K +++ +M G ++ AL+ +
Sbjct: 132 LFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAY 191
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG-DIHSTEKIFHRMRQVGYVA 403
G+ K+ LL ++ + P +Y +++ A+ G D +F +MR G A
Sbjct: 192 GRNGQY-KSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQA 250
Query: 404 RFKQFQTLVQA 414
+ TL+ A
Sbjct: 251 DIVTYNTLLSA 261
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 168/410 (40%), Gaps = 41/410 (10%)
Query: 24 RAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD--YASCLDLIAKLRGLQKAES 81
R E+ TRR W+ N +D + +D + + ++ +L+ S
Sbjct: 76 RPELGFRFFIWTTRRR-----SFRSWVTHNLVIDMLAKDDGFDTYWKILEELKN-----S 125
Query: 82 YIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL 141
IQ P +F L+A +KA E F +MKD G F N IL+ +
Sbjct: 126 NIQIPPPTFS------VLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNS--ILHVMV 177
Query: 142 DKKKVADVLLL-------MEKENVKLTQFSYKILID---IKGQSNDLTGMDQVVEAMKSE 191
K +V LL M K N + ++ IL++ G+++D M + M +
Sbjct: 178 QK----EVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKM---FDEMTQK 230
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
GI P++ I+ R + +L M+ TC LL + +LG+ D+
Sbjct: 231 GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEA 290
Query: 252 ARIWKLCESNPW---LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
+ +L E + + + I+ + + +E + ++M K + YT L++
Sbjct: 291 FALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRG 350
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ + M+ +++ M + G ++AL+K + G ++KA S+ L+ + + F P
Sbjct: 351 FCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCF-P 409
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+Y +++ + G + +IF++M +G F L+ A
Sbjct: 410 TSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKA 459
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 124/333 (37%), Gaps = 45/333 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
++Y +L+ + N MK G S CN LL + +L + A LL L
Sbjct: 237 MIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQL 296
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
EKE L Y LID ++ + + M GIEPD IL + + G
Sbjct: 297 FEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGM 356
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
+ A ML +M L + L+ + ++G D+ AR +L
Sbjct: 357 VDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDK-ARSLQL--------------- 400
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
+SK ++ YT L+ + +L + + + QM GC
Sbjct: 401 ----------------EISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSP 444
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ ++AL+ + GE+E+A + K + S L + Q A R + T
Sbjct: 445 SIMTFNALIDGLCKAGELEEARHLFYKMEIGKN-----PSLFLRLSQGADR--VMDTANG 497
Query: 393 FHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
FHR+ + F+ L Q N TP+ +
Sbjct: 498 FHRVDR-----EEDAFRVLDQMVKNGCTPSSAV 525
>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 808
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 116/267 (43%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M +E + ++ +Y LI+ G S + +V + M G+ PD T I+ Y +G +
Sbjct: 204 MLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQ 263
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA + + M+G N++ T +++ +LG+ ++ I+ K E P +
Sbjct: 264 YSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTF 323
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ I + +VE +AVF M + Y AL+ YA H M + + K++
Sbjct: 324 TSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKA 383
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
SG +++ +L+ + + +KA + ++ K KP S+ ++D Y G +
Sbjct: 384 SGLLPDVVSYTSLLSSYGRSKQPKKARE-MFNMMKKAKLKPNVVSFNALIDAYGSNGLLA 442
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
K+ M Q G TL+ A
Sbjct: 443 DAVKVLREMEQDGIHPNIVTICTLLAA 469
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 130/342 (38%), Gaps = 60/342 (17%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y L+ ++A VF ++K G + LL Y R + KK ++ +
Sbjct: 356 VSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNM 415
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+K +K S+ LID G + L +V+ M+ +GI P+ T L G+
Sbjct: 416 MKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQ 475
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---------------- 256
K +A+L + +K + C + Y +G+ ++ ++
Sbjct: 476 KVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTV 535
Query: 257 ----LCESNPW------------------LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
C+ + + +VC + I A+ K ++ EAE++F M
Sbjct: 536 LISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAG 595
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+TA+L Y + K DL+++M + + +A AL++ + G
Sbjct: 596 CCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMRAFNKRGN----- 650
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
S +LI+ ++ K +I ++ IF M
Sbjct: 651 ----------------PSQVLILAEFMKEKEIPFSDAIFFEM 676
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 158/412 (38%), Gaps = 61/412 (14%)
Query: 19 GNDLSRAEIALAMANLRTRRMYGKALQLSEWLE-TNKKLDFIERDYASCLDLIAKLRGLQ 77
G DL I L+ +T Y KAL E ++ TN + D R+ + + KL +
Sbjct: 245 GPDLVTHNIVLSA--YKTGAQYSKALSYFELMKGTNIRPDTTTRNIV--IYCLVKLGQCE 300
Query: 78 KAESYIQKIPESFRGE-----VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
KA + E R E V + +++ V+ + VF+ M +G T + N
Sbjct: 301 KAIDIFNSMREK-RAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYN 359
Query: 133 QLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+ Y + A V ++ + SY L+ G+S ++ MK
Sbjct: 360 ALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKA 419
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT-CRLLLPLYAELGKADQ 250
++P+ + L Y S G A +L+EME D + + T C LL A G+ Q
Sbjct: 420 KLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLL----AACGRCGQ 475
Query: 251 VARIWKLCESNPWLDV------CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
I + + + C +AI ++ + + E+A A++ M K ++ YT
Sbjct: 476 KVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTV 535
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK-ADSILLKAQQQ 363
L+ SGC K+ G +E AD + LK
Sbjct: 536 LI---------------------SGC----------CKMSKYGKAIEFFADMMELKIALT 564
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
K + SS ++ Y+K+G I E IF M+ G F ++ AY
Sbjct: 565 ---KEVCSS---VICAYSKQGQITEAESIFTMMKMAGCCPDIITFTAMLHAY 610
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 8/258 (3%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y L+ ++ L + VV M+ G++PD T ++L Y GR E A +LKEM
Sbjct: 329 AYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEM 388
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKV 280
E N++ + + +L Y + G+ + ++ K +SN P I+ +GK N +
Sbjct: 389 EASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCL 448
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
+ A A F+RM + T + L+ + + ++L +M + G ++ +
Sbjct: 449 DHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIM 508
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ E E+ L K Q Q P +Y ++D Y K G + ++ G
Sbjct: 509 INSMGEQQRWEQVSLFLSKMQSQG-LLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG 567
Query: 401 YVARFKQFQTLVQAYINA 418
FK T+ A INA
Sbjct: 568 ----FKPTSTMYNALINA 581
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 130/301 (43%), Gaps = 10/301 (3%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K+ + LL +++ LT +Y LI ++ D+ ++ M+ +G +PD + +
Sbjct: 169 EKLYEAFLLSQRQ--VLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSI 226
Query: 204 AKHYVSGGRKEKA--EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
++ + + + + E+E D ++ ++ +++ G + R + +SN
Sbjct: 227 IQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSN 286
Query: 262 ---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P +A I A G + EAEA+F+ + + + T+ Y ALLK Y L
Sbjct: 287 GLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDA 346
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ +V +M ++G + L+ + G E A I+LK + + +P Y I+
Sbjct: 347 EFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESA-RIVLKEMEASNVEPNSYVYSRILA 405
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFP 436
Y +G+ + ++ M+ G + ++ + N A +RM ++ + P
Sbjct: 406 SYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRP 465
Query: 437 N 437
+
Sbjct: 466 D 466
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 137/348 (39%), Gaps = 11/348 (3%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L K L+ AE + ++ ++ E Y L+ + A V
Sbjct: 328 RAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKE 387
Query: 119 MKDKGFPVTSFACNQLLILYKRLDK---KKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ S+ +++L Y+ DK +K VL M+ V+ + Y ++ID G+
Sbjct: 388 MEASNVEPNSYVYSRILASYR--DKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKY 445
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
N L E M SEGI PD+ T L + GR AE + EM+ T
Sbjct: 446 NCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTY 505
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSK 292
+++ E + +QV+ +S L + ++ +GK + +A + +
Sbjct: 506 NIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKS 565
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
T K ++ Y AL+ YA + + + M G LA ++L+ E +
Sbjct: 566 TGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAE 625
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
A ++ L+ ++N +P +Y +M + ++ M G
Sbjct: 626 AFAV-LQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSG 672
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/363 (18%), Positives = 135/363 (37%), Gaps = 42/363 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP---VTSFACNQLLILYKRLDKKKVADVL 150
+ Y L+ C +V+KA + ++M+ G+ V + Q L ++D + +
Sbjct: 186 LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLY 245
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST--QAILA---- 204
+E + +++ +I ++ D T + + +S G+ P ST ILA
Sbjct: 246 TEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNS 305
Query: 205 -----------------------------KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
K YV G + AE ++ EME +K T
Sbjct: 306 GRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTY 365
Query: 236 RLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
LL+ YA G+ + + K E++ P V + ++ + +++ V K M
Sbjct: 366 SLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKS 425
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ Y ++ + + L ++M G + W+ L+ H + G
Sbjct: 426 NGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNM 485
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
A+ L QQ + P ++Y ++++ ++ +M+ G + + TLV
Sbjct: 486 AEE-LFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLV 544
Query: 413 QAY 415
Y
Sbjct: 545 DVY 547
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 95/228 (41%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSY 165
N + A F RM +G + N L+ + + + +A+ L M++ +Y
Sbjct: 446 NCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTY 505
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I+ G+ + + M+S+G+ P+S T L Y GR A L+ ++
Sbjct: 506 NIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKS 565
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEE 282
K L+ YA+ G ++ ++L + P L + I A+G+ + E
Sbjct: 566 TGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAE 625
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A AV + M + + YT L+K + K + ++M SGC
Sbjct: 626 AFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGC 673
>gi|356534408|ref|XP_003535747.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35130-like [Glycine max]
Length = 357
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 131/318 (41%), Gaps = 48/318 (15%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
VVY + + G N KAEE+F RMK
Sbjct: 7 VVYNAYINGLMKGGNSDKAEEIFKRMK--------------------------------- 33
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
K+ K T +Y +LI++ G++ + M + +P+ T L +V G
Sbjct: 34 -KDACKSTTETYTMLINLYGKAGKSFMALILFHEMTTHKCKPNICTYTALVNAFVREGLC 92
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLY------AELGKADQVARIWKL-----CESNP 262
EKAE + ++M+ L+ + L+ Y + G A I+ L CE P
Sbjct: 93 EKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPFSRAGYPYGAAEIFSLMQHMGCE--P 150
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
++A+GK ++AEAVFK M + + K + L Y+ ++K ++++
Sbjct: 151 DRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQSAYSKMGNVNKCEEIL 210
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
QM +SG + +++ L+ G+ K + + L+ ++ + S+Y +++++Y +
Sbjct: 211 NQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEV-LRVMEKGSYVADISTYNILINRYGQ 269
Query: 383 RGDIHSTEKIFHRMRQVG 400
G I E F + G
Sbjct: 270 AGXIERMEDFFQLLPSKG 287
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-------KKVA 147
Y L+ V +KAEEVF +M++ G +A N L+ YK A
Sbjct: 78 TYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETYKFSSPFSRAGYPYGAA 137
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
++ LM+ + + SY IL+D G++ + V + MK GI P + +L Y
Sbjct: 138 EIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLQSAY 197
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DV 266
G K E +L +M LK + + + +L LY LG+ ++ + ++ E ++ D+
Sbjct: 198 SKMGNVNKCEEILNQMCKSGLKLNTYVLKSMLNLYGRLGQFGKMEEVLRVMEKGSYVADI 257
Query: 267 CM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
I +G+ +E E F+ + K +T+ + Y+ K+ K ++ ++
Sbjct: 258 STYNILINRYGQAGXIERMEDFFQLLPSKGLKPDVVTWTSRMGAYSXKKLYLKCLEIFEE 317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 197 SSTQAILAKHYVSG----GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
++ A++ Y++G G +KAE + K M+ D K T +L+ LY + GK+
Sbjct: 2 NNPSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMAL 61
Query: 253 RIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
++ ++ P + A + A+ + E+AE VF++M + + Y AL++ Y
Sbjct: 62 ILFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEVFEQMQEAGLEPDVYAYNALMETY 121
Query: 310 ADHKMLSKG------KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
S+ ++ M GC +++ LV + + G + A+++ K ++
Sbjct: 122 KFSSPFSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVF-KDMKR 180
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
P S+M++ Y+K G+++ E+I ++M + G
Sbjct: 181 VGITPTMKSHMVLQSAYSKMGNVNKCEEILNQMCKSG 217
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 7/162 (4%)
Query: 260 SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
+NP V A I K ++AE +FKRM K K +T+ YT L+ +Y
Sbjct: 2 NNPSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKSTTETYTMLINLYGKAGKSFMAL 61
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
L +M C + ALV V G EKA+ + + Q+ +P +Y +M+
Sbjct: 62 ILFHEMTTHKCKPNICTYTALVNAFVREGLCEKAEEV-FEQMQEAGLEPDVYAYNALMET 120
Query: 380 Y------AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Y ++ G + +IF M+ +G + LV AY
Sbjct: 121 YKFSSPFSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAY 162
>gi|22773251|gb|AAN06857.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 769
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 176/418 (42%), Gaps = 21/418 (5%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALA-MANLRTRRMYGKALQLSEWLETNKKLDFIER 61
APD S + TL +G R +AL + ++ R + + +S L+ +KK E+
Sbjct: 173 APDNSTYGTLIDVHCKG---GRERMALLWLGDMIKRGLLPDEITMSIVLQVHKKAGEYEK 229
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
+L K L ES ++ Y TL+ ++K + FN+M
Sbjct: 230 -----AELFFKRWSL---ESDVKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQMLR 281
Query: 122 KGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
+G N ++ ++ K ++VA ++ ME+ +Y ILI + + ND+
Sbjct: 282 EGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCLPDTRTYNILISLYREINDIDV 341
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+ MK+E + PD + L Y G +A+A+LKEM N+ +T +
Sbjct: 342 AEYYFRKMKAENLLPDVVSCRTLLYGYSIKGMVTEAQALLKEMYERNMVIDEYTQSAVTR 401
Query: 241 LYAELGKADQVARIWKLCES-NPWLDV-CMAA-IEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+Y + G +Q W E N L+ C +A I+A+G+ + AE F K K L
Sbjct: 402 MYVDAGMLEQA---WCWFEKFNYQLNSECFSANIDAFGERGHILLAEKAFMCCIKR-KML 457
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
ST ++K Y + L + ++ M G L + +L+ L EKA
Sbjct: 458 STCVCNVMIKAYGLVEKLDEACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKA-LYY 516
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L+ Q K Y +++ +AK G++H + +F M G A + L+ AY
Sbjct: 517 LRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAY 574
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y ++I ++ +L +D + M + GI+ D+ +IL Y G +KAEA ++
Sbjct: 532 YSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLK 591
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-----NPWLDVCMAAIEAWGKLNK 279
L E L+ LY ++ + + +KL +S N + CM I+ +
Sbjct: 592 KAGLCESATIYNSLIKLYTKVVYLAEAQKTYKLLKSLNADTNLYASNCM--IDLYSDHCM 649
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
V+EA +F+ + T K H ++ +Y + + K+M SG L++++
Sbjct: 650 VKEAREIFENLKVTGKANEFSH-AMMVCLYKKIARFDEAHRISKKMQASGFLTQALSYNS 708
Query: 340 LVKLHVEGGEVEKADSILLKAQQQN 364
+++++V GG +E A I K N
Sbjct: 709 VIQMYVSGGRMEDALKIFQKMLASN 733
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 112/267 (41%), Gaps = 17/267 (6%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +++ G++ + ++ M S G+ PD+ST L + GGR+ A L +M
Sbjct: 144 YNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNSTYGTLIDVHCKGGRERMALLWLGDMI 203
Query: 225 GDNLKEHRWTCRLLLPLYAELG---KADQVARIWKL----------CESNPWLDVCMAAI 271
L T ++L ++ + G KA+ + W L C S L I
Sbjct: 204 KRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYS---LYTYNTLI 260
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ +GK ++E+ F +M + + + ++ V+ H+ + + L++ M E C
Sbjct: 261 DTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCL 320
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
++ L+ L+ E +++ A+ K + +N + S L+ Y+ +G + +
Sbjct: 321 PDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPDVVSCRTLLYG-YSIKGMVTEAQA 379
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINA 418
+ M + V + + Y++A
Sbjct: 380 LLKEMYERNMVIDEYTQSAVTRMYVDA 406
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 7/278 (2%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I G L ++ + M+ GI PD T + L + EKA L++M+
Sbjct: 464 VMIKAYGLVEKLDEACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAA 523
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCMAAI--EAWGKLNKVEEA 283
L +++ +A+ G V +++ + S D + +I +A+ ++ V++A
Sbjct: 524 KLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKA 583
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
EA F + K S Y +L+K+Y L++ + K + A + ++ L
Sbjct: 584 EAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKTYKLLKSLNADTNLYASNCMIDL 643
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ + V++A I + K FS M++ Y K +I +M+ G++
Sbjct: 644 YSDHCMVKEAREIFENLKVTGKANE-FSHAMMVC-LYKKIARFDEAHRISKKMQASGFLT 701
Query: 404 RFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKA 439
+ + +++Q Y++ A I +M A N PN A
Sbjct: 702 QALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDA 739
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 126/301 (41%), Gaps = 10/301 (3%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K+ + LL +++ LT +Y LI +++DL ++ M+ +G D + +
Sbjct: 239 EKLYEAFLLSQRQT--LTPLTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFI 296
Query: 204 AKHYVSGGRKEKA--EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
+ + + + + + E+E D ++ ++ +A+ G ++ + + N
Sbjct: 297 IQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGN 356
Query: 262 ---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P +A I A G + EEAEA+F+ + + T+ Y ALLK Y L
Sbjct: 357 GLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDA 416
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ +V +M SG + L+ + G E A I+LK + + +P + I+
Sbjct: 417 ESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESA-RIVLKEMEASGVRPNSYVFSRILA 475
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFP 436
Y RG + ++ MR G + ++ + N A DRMR + V P
Sbjct: 476 SYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQP 535
Query: 437 N 437
+
Sbjct: 536 D 536
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 3/203 (1%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y L+ ++ L + +V M+ G PD T ++L Y + GR E A +LKEM
Sbjct: 399 AYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEM 458
Query: 224 EGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
E ++ + + +L Y + G K+ QV R + +P I+ +GK N +
Sbjct: 459 EASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCL 518
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
+ A A F RM + + L+ + +K ++L + M ESGC ++ +
Sbjct: 519 DHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIM 578
Query: 341 VKLHVEGGEVEKADSILLKAQQQ 363
+ E E ++L K Q Q
Sbjct: 579 INSFGEQERWEDVKTLLGKMQSQ 601
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/441 (19%), Positives = 170/441 (38%), Gaps = 56/441 (12%)
Query: 41 GKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLL 100
G A L WLE + E Y+ + + + L +A Q+ + + Y L+
Sbjct: 206 GTAYSLVTWLERHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLT---PLTYNALI 262
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI----------------LYKRLDKK 144
C ++++KA + +RM+ G+P + F +I +Y ++
Sbjct: 263 GACARNDDLEKALNLMSRMRRDGYP-SDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESD 321
Query: 145 KVA-------DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV------------ 185
K+ D+++ K S+ ++ G S + V+
Sbjct: 322 KIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEA 381
Query: 186 ----EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
E +K G+ P + L K YV G + AE+++ EME T LL+
Sbjct: 382 EAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDA 441
Query: 242 YAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
YA G+ + + K E++ P V + ++ K +++ V + M +
Sbjct: 442 YANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPD 501
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
Y ++ + L +M G + W+ L+ H + G KA+ L
Sbjct: 502 RHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEE-LF 560
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT--LVQAYI 416
+A Q++ P ++Y ++++ + ++ + + +M+ G +A + T L + I
Sbjct: 561 EAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLGLSEQAI 620
Query: 417 NAKTPAYGIRDRMRADNVFPN 437
N A+ + MRAD + P+
Sbjct: 621 N----AFRV---MRADGLKPS 634
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 34/304 (11%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L K L+ AES + ++ S E Y L+ + A V
Sbjct: 398 RAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKE 457
Query: 119 MKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G S+ +++L Y+ K +K VL M V + Y ++ID G+ N
Sbjct: 458 MEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNC 517
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL--------- 228
L + M+ EG++PD+ T L + G KAE + + M+
Sbjct: 518 LDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNI 577
Query: 229 ------KEHRW-TCRLLLP------------LYAELGKADQVARIWKLCESN---PWLDV 266
++ RW + LL Y LG ++Q +++ ++ P + V
Sbjct: 578 MINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLGLSEQAINAFRVMRADGLKPSVLV 637
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ I A+G+ + EA +V + M + K YT L+K + K + ++M
Sbjct: 638 LNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMT 697
Query: 327 ESGC 330
SGC
Sbjct: 698 LSGC 701
>gi|242078445|ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
gi|241940341|gb|EES13486.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
Length = 602
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 147/319 (46%), Gaps = 11/319 (3%)
Query: 134 LLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ Y +L D + VL M K+ + + S L++ G+ + V M++ G
Sbjct: 146 LVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTSG 205
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD---NLKEHRWTCRLLLPLYAELGKAD 249
EP T I+ K V G + ++AEA+ +++ + + K + +++ +Y + G
Sbjct: 206 PEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYA 265
Query: 250 QVARIW-KLCESN-PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
Q +++ ++ E P V ++ ++ +E +++ +M + K Y+ L+K
Sbjct: 266 QARKLFAQMSERKIPLSTVTFNSLMSFE--TDYKEVSSIYDQMQRAGMKPDVVSYSLLIK 323
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
Y + + + ++M ++G +++ L+ G V++A+++ KA ++++ +
Sbjct: 324 AYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFAISGLVDEANTV-FKAMRRHRVE 382
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGI 425
P SY ++ Y D++ EK F R++ G + TL++ Y +N +
Sbjct: 383 PDLCSYTTMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKVMRV 442
Query: 426 RDRMRADNVFPNKALAAQV 444
+RMR V PN+ + +
Sbjct: 443 YERMRIQGVEPNQTIYTTI 461
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 154/398 (38%), Gaps = 77/398 (19%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLANC 103
++ EWL T DF E D+ + KL +AE ++ + + ++ V+ +T L
Sbjct: 125 EILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEA 184
Query: 104 VA-GNNVKKAEEVFNRMKDKG---FPV------------------------------TSF 129
G +KAE VF RM+ G PV TSF
Sbjct: 185 YGRGKQYRKAEAVFRRMQTSGPEPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSF 244
Query: 130 ACNQ-----LLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
+Q ++ +YK+ D + + M + + L+ ++ L+ + D +
Sbjct: 245 KPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERKIPLSTVTFNSLMSFE---TDYKEVSS 301
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ G++PD + ++L K Y R+E+A A+ +EM ++ R + +LL +A
Sbjct: 302 IYDQMQRAGMKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFA 361
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
G D EA VFK M + + YT
Sbjct: 362 ISGLVD--------------------------------EANTVFKAMRRHRVEPDLCSYT 389
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
++ Y + ++ + +++ + G + + L+K + + VEK + + + Q
Sbjct: 390 TMVLAYVNASDMNGAEKFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKVMRVYERMRIQ 449
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+P + Y IMD + + D + F M GY
Sbjct: 450 G-VEPNQTIYTTIMDAHGRNSDFGNAVIWFKEMEARGY 486
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 242 YAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+ +L K + V+ I + + W D + + A+GKL AE V K M+K +
Sbjct: 114 FKQLKKWNIVSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQP 173
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
S T L++ Y K K + + ++M SG P+ + ++K VEG + ++A++I
Sbjct: 174 SVISQTGLMEAYGRGKQYRKAEAVFRRMQTSGPEPSPVTYQIILKSLVEGDKYKEAEAIF 233
Query: 358 --LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L +++ FKP + +++ Y K GD K+F +M +
Sbjct: 234 EDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSE 276
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
++ LI+ G + +V + M G+ PD T I+ Y SG + KA + + M
Sbjct: 7 TFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELM 66
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLN 278
+G N++ T +++ ++ + Q I+ K E P + + I +
Sbjct: 67 KGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRG 126
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
++E+ +AVF M K + Y AL+ YA H M + + +M SG +++
Sbjct: 127 QIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYT 186
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+L+ + +A + ++NK KP SY +MD Y G + I M Q
Sbjct: 187 SLISTFGRSQQPARAREV-FDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQ 245
Query: 399 VGYVARFKQFQTLVQA 414
G TL+ A
Sbjct: 246 DGIHPNVVSICTLLAA 261
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 24/280 (8%)
Query: 89 SFRGEV-----VYRTLLANCVAGNNV---------------KKAEEVFNRMKDKGFPVTS 128
S RG++ V+ T+LA + N V K+A VF+ MK GF
Sbjct: 123 SVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDV 182
Query: 129 FACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
+ L+ + R + A +V +M++ K SY L+D G + L ++
Sbjct: 183 VSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILRE 242
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M+ +GI P+ + L G+K +++L E + + C + Y +G+
Sbjct: 243 MEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGE 302
Query: 248 ADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
++ +++ E + P I +++K EEA FK M LS++ Y++
Sbjct: 303 YEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSS 362
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
++ Y+ L K + L + SGC + + A++ +
Sbjct: 363 MICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAY 402
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 113/282 (40%), Gaps = 9/282 (3%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKK 144
IP S + L+ C + N ++A V +M D G N +L YK
Sbjct: 1 IPPS---RSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYS 57
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE--PDSSTQAI 202
K LM+ N++ + I+I + ++ +M+ + E PD T
Sbjct: 58 KALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTS 117
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN 261
+ Y G+ E +A+ M + +K + + L+ YA G + ++ ++ S
Sbjct: 118 IIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSG 177
Query: 262 PWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
DV + I +G+ + A VF M + K + Y AL+ Y + L +
Sbjct: 178 FCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAV 237
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
D++++M + G H ++ L+ G+ DS+L A+
Sbjct: 238 DILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAE 279
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 75/184 (40%), Gaps = 7/184 (3%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE--S 328
+ A+ + +A + F+ M T + T ++ K + ++ M E S
Sbjct: 47 LSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRS 106
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
C + + +++ L+ G++E ++ KP SY ++ YA G
Sbjct: 107 ECRPDVVTFTSIIHLYSVRGQIEDCKAVF-STMLAEGIKPNIVSYNALISAYASHGMDKE 165
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG--IRDRMRADNVFPNKALAAQVAQ 446
+F M++ G+ + +L+ + ++ PA + D M+ + PN L + A
Sbjct: 166 AFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPN--LVSYNAL 223
Query: 447 VDAF 450
+DA+
Sbjct: 224 MDAY 227
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 168/387 (43%), Gaps = 18/387 (4%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK----IP-ESFRGEV-V 95
+AL L EW + D R ++L+ ++ G + S K IP E + +V
Sbjct: 158 RALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRA 217
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK--KVADVLLLM 153
Y T+L + K+A ++F +MK+ G T N +L +Y ++ + ++ ++L M
Sbjct: 218 YTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEM 277
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ ++L +F+ +I G+ L + + +K G +P + T + + + G
Sbjct: 278 RSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIY 337
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAA 270
+A ++LKEME +N T L Y G D+ + S P
Sbjct: 338 TEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTV 397
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE--- 327
I+A+GK + ++A +F M + Y ++L + S+ +D++K + E
Sbjct: 398 IDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKK---SRTEDVIKVLCEMKL 454
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+GC W+ ++ + E G+ + + L+ + F+P ++ ++ YA+ G
Sbjct: 455 NGCAPNRATWNTMLAVCSEEGKHNYVNKV-LREMKNCGFEPDKDTFNTLISAYARCGSEV 513
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+ K++ M + G+ + L+ A
Sbjct: 514 DSAKMYGEMVKSGFTPCVTTYNALLNA 540
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 123/320 (38%), Gaps = 44/320 (13%)
Query: 114 EVFNRMKDKGFPVTSFACNQLLILYKR---LDKKKVADVLLLMEKENVKLTQFSYKILID 170
E+ + M+ KG + F C+ ++ R LD+ + L ++ K +Y ++
Sbjct: 272 ELLDEMRSKGLELDEFTCSTVISACGREGMLDEAR--KFLAELKFNGYKPGTVTYNSMLQ 329
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ G++ T +++ M+ PDS T LA YV G ++ A++ M +
Sbjct: 330 VFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMP 389
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKL-----CESNPW---------------------- 263
+ T ++ Y + G+ D R++ L C N +
Sbjct: 390 NAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVL 449
Query: 264 ----LDVCMAAIEAWGKLNKVEEAEA-------VFKRMSKTWKKLSTKHYTALLKVYADH 312
L+ C W + V E V + M + + L+ YA
Sbjct: 450 CEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARC 509
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
+ +M +SG ++AL+ G+ + A+S++ + + FKP +S
Sbjct: 510 GSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVI-QDMRTKGFKPNENS 568
Query: 373 YMLIMDQYAKRGDIHSTEKI 392
Y L++ Y+K G++ EK+
Sbjct: 569 YSLLLHCYSKAGNVKGIEKV 588
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 96/222 (43%), Gaps = 5/222 (2%)
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
C ++G++K E I F ++ RTL+ +++ E F++++ G+
Sbjct: 575 CYSKAGNVKGIEKVEKEIYD-GHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYK 633
Query: 126 VTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
N +L ++ R K ++L + + ++ F+Y L+D+ + + ++V
Sbjct: 634 PDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEV 693
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
++ +++ G EPD + + K + G ++A +L EM ++ T L YA
Sbjct: 694 LKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAG 753
Query: 245 L---GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
+ +A++V R P ++ + K K EEA
Sbjct: 754 MELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEA 795
>gi|76152337|gb|ABA39836.1| putative DNA-binding protein [Solanum lycopersicum]
Length = 156
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
M AP + + + K+ E GN+++R E+A AM N R RRMYGKALQL EWLE++ +L FI+
Sbjct: 90 MAAPALRVSKIMDKWVE-GNNVTRVEVASAMLNFRKRRMYGKALQLPEWLESSNQLTFID 148
Query: 61 RDYASCL 67
RDYA L
Sbjct: 149 RDYALVL 155
>gi|218188053|gb|EEC70480.1| hypothetical protein OsI_01546 [Oryza sativa Indica Group]
Length = 484
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 119/261 (45%), Gaps = 8/261 (3%)
Query: 3 APDISIHSTLTKYAEEGND--LSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
A + S+ L ++ EG + ++ A++A +L + AL+L +W+ K +
Sbjct: 57 AGEGSVSRVLDEWVREGREEAIAAADLAKCARDLHKVKRDAHALELMDWMVNTKGMSMTY 116
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTL--LANCVAGNNV-KKAEEVFN 117
YA L+L+ + G++ AE Y IP SF + +RT L NC + +KA ++
Sbjct: 117 ARYALHLELLYSVYGIEAAEEYFSGIP-SFTRDQNHRTYGALLNCYCSAKMEEKATNIYR 175
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
RM + G P ++ N L+ LY L + K A++ M++ NV+ + + IL+ N
Sbjct: 176 RMDELGIPSSTKLMNNLMGLYLELGQHSKAANLFDEMKERNVQPDELTCCILMRSHAAHN 235
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE-AMLKEMEGDNLKEHRWTC 235
+ + + M + S L Y++ G E+AE A ++ E R
Sbjct: 236 KIDTVKETFYNMSLLDVPKQWSIFRTLGSIYMNAGMVEEAELAFMRAQEFLGFDHGRHPF 295
Query: 236 RLLLPLYAELGKADQVARIWK 256
L+ +A +G V R+WK
Sbjct: 296 YFLMRQFASIGSLRGVNRVWK 316
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
+E AE F + + + + Y ALL Y KM K ++ ++M E G +
Sbjct: 132 IEAAEEYFSGIPSFTRDQNHRTYGALLNCYCSAKMEEKATNIYRRMDELGIPSSTKLMNN 191
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
L+ L++E G+ KA ++ + +++N +P + ++M +A I + ++ F+ M +
Sbjct: 192 LMGLYLELGQHSKAANLFDEMKERN-VQPDELTCCILMRSHAAHNKIDTVKETFYNMSLL 250
Query: 400 GYVARFKQFQTLVQAYINA 418
++ F+TL Y+NA
Sbjct: 251 DVPKQWSIFRTLGSIYMNA 269
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 146/352 (41%), Gaps = 7/352 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
V + +LL G+ V A +F++M G+ N ++ L K D+L
Sbjct: 152 VTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
MEK+ + +Y LI S + ++V M I PD T L V GR
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLL---LPLYAELGKADQVARIWKLCESNPWLDVCMA 269
+AE +EM +L T LL L +Y+ L +A+++ P +
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I + K KVE +F MS+ +T YT L++ Y L+ +++ ++M G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
H + ++ L+ + G++EKA ++L Q+N +Y +I+ K G++
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKA-LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNKA 439
I+ + G + + T++ + A + +M+ D + PN+
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 5/141 (3%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL 150
R V Y L+ + AEE+F RM G N L L+ D K+ L
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL--LHGLCDNGKIEKAL 416
Query: 151 LL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
++ M+K + +Y I+I ++ ++ + ++ +G+ PD T +
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 208 VSGGRKEKAEAMLKEMEGDNL 228
G + +A+A+ ++M+ D +
Sbjct: 477 YKKGLRREADALFRKMKEDGI 497
>gi|115450907|ref|NP_001049054.1| Os03g0162900 [Oryza sativa Japonica Group]
gi|108706330|gb|ABF94125.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547525|dbj|BAF10968.1| Os03g0162900 [Oryza sativa Japonica Group]
gi|222624238|gb|EEE58370.1| hypothetical protein OsJ_09514 [Oryza sativa Japonica Group]
Length = 823
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 176/418 (42%), Gaps = 21/418 (5%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALA-MANLRTRRMYGKALQLSEWLETNKKLDFIER 61
APD S + TL +G R +AL + ++ R + + +S L+ +KK E+
Sbjct: 173 APDNSTYGTLIDVHCKG---GRERMALLWLGDMIKRGLLPDEITMSIVLQVHKKAGEYEK 229
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
+L K L ES ++ Y TL+ ++K + FN+M
Sbjct: 230 A-----ELFFKRWSL---ESDVKMKGHPCYSLYTYNTLIDTYGKAGQLEKVSDTFNQMLR 281
Query: 122 KGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
+G N ++ ++ K ++VA ++ ME+ +Y ILI + + ND+
Sbjct: 282 EGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCLPDTRTYNILISLYREINDIDV 341
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+ MK+E + PD + L Y G +A+A+LKEM N+ +T +
Sbjct: 342 AEYYFRKMKAENLLPDVVSCRTLLYGYSIKGMVTEAQALLKEMYERNMVIDEYTQSAVTR 401
Query: 241 LYAELGKADQVARIWKLCES-NPWLDV-CMAA-IEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+Y + G +Q W E N L+ C +A I+A+G+ + AE F K K L
Sbjct: 402 MYVDAGMLEQA---WCWFEKFNYQLNSECFSANIDAFGERGHILLAEKAFMCCIKR-KML 457
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
ST ++K Y + L + ++ M G L + +L+ L EKA
Sbjct: 458 STCVCNVMIKAYGLVEKLDEACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKA-LYY 516
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L+ Q K Y +++ +AK G++H + +F M G A + L+ AY
Sbjct: 517 LRKMQAAKLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAY 574
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y ++I ++ +L +D + M + GI+ D+ +IL Y G +KAEA ++
Sbjct: 532 YSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKAEAYFGLLK 591
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-----NPWLDVCMAAIEAWGKLNK 279
L E L+ LY ++ + + +KL +S N + CM I+ +
Sbjct: 592 KAGLCESATIYNSLIKLYTKVVYLAEAQKTYKLLKSLNADTNLYASNCM--IDLYSDHCM 649
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
V+EA +F+ + T K H ++ +Y + + K+M SG L++++
Sbjct: 650 VKEAREIFENLKVTGKANEFSH-AMMVCLYKKIARFDEAHRISKKMQASGFLTQALSYNS 708
Query: 340 LVKLHVEGGEVEKADSILLKAQQQN 364
+++++V GG +E A I K N
Sbjct: 709 VIQMYVSGGRMEDALKIFQKMLASN 733
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 112/267 (41%), Gaps = 17/267 (6%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +++ G++ + ++ M S G+ PD+ST L + GGR+ A L +M
Sbjct: 144 YNVVLCAVGRARRWDLVARLWHEMHSGGVAPDNSTYGTLIDVHCKGGRERMALLWLGDMI 203
Query: 225 GDNLKEHRWTCRLLLPLYAELG---KADQVARIWKL----------CESNPWLDVCMAAI 271
L T ++L ++ + G KA+ + W L C S L I
Sbjct: 204 KRGLLPDEITMSIVLQVHKKAGEYEKAELFFKRWSLESDVKMKGHPCYS---LYTYNTLI 260
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ +GK ++E+ F +M + + + ++ V+ H+ + + L++ M E C
Sbjct: 261 DTYGKAGQLEKVSDTFNQMLREGVSPNVVTFNTMIHVWGKHRRMEQVASLMRTMEEFQCL 320
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
++ L+ L+ E +++ A+ K + +N + S L+ Y+ +G + +
Sbjct: 321 PDTRTYNILISLYREINDIDVAEYYFRKMKAENLLPDVVSCRTLLYG-YSIKGMVTEAQA 379
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINA 418
+ M + V + + Y++A
Sbjct: 380 LLKEMYERNMVIDEYTQSAVTRMYVDA 406
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 7/278 (2%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I G L ++ + M+ GI PD T + L + EKA L++M+
Sbjct: 464 VMIKAYGLVEKLDEACEIADGMERYGILPDYLTYSSLIHLMSTAKLPEKALYYLRKMQAA 523
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCMAAI--EAWGKLNKVEEA 283
L +++ +A+ G V +++ + S D + +I +A+ ++ V++A
Sbjct: 524 KLLIDCVPYSVVISCFAKNGNLHMVDCLFREMITSGIQADTYVYSILIDAYAEVGDVQKA 583
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
EA F + K S Y +L+K+Y L++ + K + A + ++ L
Sbjct: 584 EAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKTYKLLKSLNADTNLYASNCMIDL 643
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ + V++A I + K FS M++ Y K +I +M+ G++
Sbjct: 644 YSDHCMVKEAREIFENLKVTGKANE-FSHAMMVC-LYKKIARFDEAHRISKKMQASGFLT 701
Query: 404 RFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKA 439
+ + +++Q Y++ A I +M A N PN A
Sbjct: 702 QALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDA 739
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%), Gaps = 10/205 (4%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y+ +D A++ +QKAE+Y + ++ E +Y +L+ + +A++ + +K
Sbjct: 567 YSILIDAYAEVGDVQKAEAYFGLLKKAGLCESATIYNSLIKLYTKVVYLAEAQKTYKLLK 626
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLT----QFSYKILIDIKGQSN 176
+A N ++ LY K A + EN+K+T +FS+ +++ + +
Sbjct: 627 SLNADTNLYASNCMIDLYSDHCMVKEAREIF----ENLKVTGKANEFSHAMMVCLYKKIA 682
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
++ + M++ G + + + + YVSGGR E A + ++M N + T +
Sbjct: 683 RFDEAHRISKKMQASGFLTQALSYNSVIQMYVSGGRMEDALKIFQKMLASNTPPNDATFK 742
Query: 237 LLLPLYAELGKADQVARIWKLCESN 261
L + + G ++ R +L N
Sbjct: 743 ALKIILVKRGVSNNDIRRLELLRKN 767
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ ++ LI+ G + +V + M G+ PD T I+ Y SG +
Sbjct: 91 MLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQ 150
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA + + M+G N++ T +++ ++ + Q I+ K E P +
Sbjct: 151 YSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTF 210
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ I + ++E+ +AVF M K + Y AL+ YA H M + + +M
Sbjct: 211 TSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKR 270
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
SG +++ +L+ + +A + ++NK KP SY +MD Y G +
Sbjct: 271 SGFCPDVVSYTSLISTFGRSQQPARAREV-FDMMKRNKCKPNLVSYNALMDAYGSNGYLP 329
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
I M Q G TL+ A
Sbjct: 330 QAVDILREMEQDGIHPNVVSICTLLAA 356
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 24/300 (8%)
Query: 89 SFRGEV-----VYRTLLANCVAGNNV---------------KKAEEVFNRMKDKGFPVTS 128
S RG++ V+ T+LA + N V K+A VF+ MK GF
Sbjct: 218 SVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDV 277
Query: 129 FACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
+ L+ + R + A +V +M++ K SY L+D G + L ++
Sbjct: 278 VSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILRE 337
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M+ +GI P+ + L G+K +++L E + + C + Y +G+
Sbjct: 338 MEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGE 397
Query: 248 ADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
++ +++ E + P I +++K EEA FK M LS++ Y++
Sbjct: 398 YEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSS 457
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
++ Y+ L K + L + SGC + + A++ + EK ++ + + N
Sbjct: 458 MICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANN 517
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 113/282 (40%), Gaps = 9/282 (3%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKK 144
IP S + L+ C + N ++A V +M D G N +L YK
Sbjct: 96 IPPS---RSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYS 152
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE--PDSSTQAI 202
K LM+ N++ + I+I + ++ +M+ + E PD T
Sbjct: 153 KALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTS 212
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN 261
+ Y G+ E +A+ M + +K + + L+ YA G + ++ ++ S
Sbjct: 213 IIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSG 272
Query: 262 PWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
DV + I +G+ + A VF M + K + Y AL+ Y + L +
Sbjct: 273 FCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAV 332
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
D++++M + G H ++ L+ G+ DS+L A+
Sbjct: 333 DILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAE 374
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/293 (18%), Positives = 113/293 (38%), Gaps = 10/293 (3%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y ++I + + N + + M+ +PD T L + G+ A ++++M
Sbjct: 33 YNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMEDML 92
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVE 281
+ R T L+ G + R+ K N P L + A+ +
Sbjct: 93 RAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYS 152
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE--SGCHIGPLAWDA 339
+A + F+ M T + T ++ K + ++ M E S C + + +
Sbjct: 153 KALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTS 212
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
++ L+ G++E ++ KP SY ++ YA G +F M++
Sbjct: 213 IIHLYSVRGQIEDCKAVF-STMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRS 271
Query: 400 GYVARFKQFQTLVQAYINAKTPAYG--IRDRMRADNVFPNKALAAQVAQVDAF 450
G+ + +L+ + ++ PA + D M+ + PN L + A +DA+
Sbjct: 272 GFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPN--LVSYNALMDAY 322
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 144/327 (44%), Gaps = 11/327 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y +L N + A +F+ M+ + + + L+ + K+ + D L
Sbjct: 160 YNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSF---GKEGMFDSALSWLQ 216
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME++ V Y LI++ + D + + +K GI PD + Y
Sbjct: 217 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 276
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CM 268
++A ++KEM + + + LL +Y E K + ++ ++ E N LD+ C
Sbjct: 277 LFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCN 336
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+L+ V+EA+ +F + K + + Y +L+VY + ++ + L + M
Sbjct: 337 IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 396
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ ++ ++K++ + E EKA + L++ Q +P +Y I+ + K G +
Sbjct: 397 DIEQNVVTYNTMIKIYGKTMEHEKATN-LVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 455
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
+F ++R G +QT++ AY
Sbjct: 456 AATLFQKLRSSGVEIDQVLYQTMIVAY 482
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 194/454 (42%), Gaps = 68/454 (14%)
Query: 3 APDISIHSTL-TKYAEEG-------------NDLSRAEIALAMANL--RTRRM--YGKAL 44
APD +STL T + +EG D ++ L +NL +RR+ Y KA+
Sbjct: 189 APDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVL-YSNLIELSRRLCDYSKAI 247
Query: 45 QLSEWLE-TNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
+ L+ + D + Y S +++ K + ++A I+++ E+ V Y TLL+
Sbjct: 248 SIFSRLKRSGITPDLVA--YNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLS 305
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL---------- 151
V + +A VF MK+ P+ CN ++ +Y +LD K AD L
Sbjct: 306 VYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 365
Query: 152 --------------------------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
LM++++++ +Y +I I G++ + +V
Sbjct: 366 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 425
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M+S GIEP++ T + + + G+ ++A + +++ ++ + + ++ Y +
Sbjct: 426 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 485
Query: 246 GKADQVARI---WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
G R+ KL ++ P AI K EEA VF++ ++ + +
Sbjct: 486 GLMGHAKRLLHELKLPDNIPR----ETAITILAKAGSTEEATWVFRQAFESGEVKDISVF 541
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
++ +Y+ ++ ++ ++M +G A ++ + + E EKAD++ + Q+
Sbjct: 542 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREFEKADTVYREMQE 601
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ P + ++ Y+ + D E +F R+
Sbjct: 602 EGCVFPD-EVHFQMLSLYSSKKDFEMVESLFERL 634
>gi|12321886|gb|AAG50982.1|AC073395_24 hypothetical protein, 3' partial; 101251-102939 [Arabidopsis
thaliana]
Length = 532
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 178/410 (43%), Gaps = 34/410 (8%)
Query: 34 LRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGE 93
LR+ +AL++S+W+ K + E D+++ L K+ L++AE + + IPE+ R E
Sbjct: 83 LRSSNRPRQALEVSDWMVEQKMYNLPE-DFSARFHLTEKVLNLEEAEKFFESIPENMRFE 141
Query: 94 VVYRTLL---ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADV 149
+Y +LL A +KKAE VF +MK G + N + LY L ++ KV ++
Sbjct: 142 SMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVDEI 201
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
L M++ NV+L + + + +D+ MD+ + A + E D T +AK YV
Sbjct: 202 LREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL-ADRKEITRLDGLTMLAMAKAYVR 260
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-------KLCESNP 262
G E + + + K++ R L+ +LG +I+ L N
Sbjct: 261 DGEIEDVHRVWDKYKATRQKDNE-EFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNR 319
Query: 263 WLDVCMAAIEAWGKLNKVEE--------------AEAVFKRMSKTWKKLSTKHYTALLKV 308
D+ ++ G + K ++ + + M K K+S L+K
Sbjct: 320 IPDMLVSGYREKGMVMKADKLVNKTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKN 379
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG--EVEKADSILLKAQQQNKF 366
D LSK + M + + D +LH+ +E+A++ + +N
Sbjct: 380 LRDSNQLSKALEASTWMCQKKV-FNLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMK 438
Query: 367 KPMFSSYMLIMDQYAKRGDIHS-TEKIFHRMRQVGYVARFKQFQTLVQAY 415
+S Y ++ YA+ + S E +F +MR++G ++ F +L+ Y
Sbjct: 439 D--YSVYDTLLSCYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLISLY 486
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Query: 19 GNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQK 78
GN +S + + NLR KAL+ S W+ K + DYA+ L L K+ GL++
Sbjct: 365 GNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTEKVLGLEE 424
Query: 79 AESYIQ-KIPESFRGEVVYRTLLANCVA--GNNVKKAEEVFNRMKDKGFPVTSFACNQLL 135
AE++ + IPE+ + VY TLL+ C A N KAE VF +M++ G N L+
Sbjct: 425 AENFFESSIPENMKDYSVYDTLLS-CYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLI 483
Query: 136 ILYKRLDKKKVADVLLL-MEKENVK 159
LY K V ++LL M+ +N++
Sbjct: 484 SLYSGQGKLSVVNILLCDMKHKNIE 508
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 160/409 (39%), Gaps = 65/409 (15%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAK-------LRGLQKAESYIQKIPESFRGEV 94
+ L + +W TN ++ A+ L ++ K + KAES I +
Sbjct: 218 ECLTMQQWYATNARM------VATILSVLGKANQEGIAVEIFAKAESVIADTVQ------ 265
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL------------------- 135
VY ++ N +K E+FN M+++G + N L+
Sbjct: 266 VYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLD 325
Query: 136 -----------ILYKRL--------DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
I Y L + K+ V ME + ++Y +I + G+
Sbjct: 326 EVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCG 385
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ + E +KS G PD+ T L + G EK + +EM + T
Sbjct: 386 FALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYN 445
Query: 237 LLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
++ +Y + G+ D+ R+++ +S NP I+ GK +K+EEA V M
Sbjct: 446 TIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDA 505
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K + Y+AL+ YA + ++ +M ESG LA+ ++ + E++KA
Sbjct: 506 GVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKA 565
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKR--GDIHSTEKIFHRMRQVG 400
+ L + + F P Y +++ + GD+ E++ +++G
Sbjct: 566 -AALYQEMIEAGFTPDTGLYEVMLPALVRENMGDV--IERVVQDTKELG 611
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 166/378 (43%), Gaps = 11/378 (2%)
Query: 56 LDFIERDYASCLDLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAE 113
LD + ++ KL+ Q AES ++ + + S V+ L+ ++A
Sbjct: 785 LDNVTVHIIDIIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERAR 844
Query: 114 EVFNRMKDKGFPVTSFACN---QLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
+FN M +G T + N Q LI+ RL + V V+ ++ ++K+++ S ++++
Sbjct: 845 AIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYV--VIQELQDMDLKISKSSILLMLE 902
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
Q+ +L + +V MK+ G P ++ R ML EM K
Sbjct: 903 AFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKP 962
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVF 287
+L LY+ + + + I+++ + P + I + + ++ EE ++
Sbjct: 963 DLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLM 1022
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+M + Y +++ ++ ++ + ++L +++ +G + + ++K++
Sbjct: 1023 HKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTS 1082
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+ +KA++ LL+ ++ +P ++ L+M Y K G ++I +R +G V
Sbjct: 1083 GDHQKAEN-LLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLP 1141
Query: 408 FQTLVQAYINAKTPAYGI 425
+ +++ AY+ GI
Sbjct: 1142 YSSVIDAYLKKGDAKAGI 1159
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 111/267 (41%), Gaps = 4/267 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
+YR ++ V+ + + M + GF N +L LY +++ + + + ++
Sbjct: 931 LYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMI 990
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ + + +Y LI + + + ++ MKS G+EP T + +
Sbjct: 991 QDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLY 1050
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAA 270
++AE + +E+ + K R L++ +Y G KA+ + I K P
Sbjct: 1051 DQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLL 1110
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ ++GK + EEA+ + K + L T Y++++ Y G + + +M E+
Sbjct: 1111 MVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAI 1170
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSIL 357
W ++ GEV A+++L
Sbjct: 1171 EPDHRIWTCFIRAASLSGEVNDANNLL 1197
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 134/326 (41%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A + KA EV N M G N +L Y + K A L
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y +L+D ++ ++ ++M G++P+ +T L + Y + G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ +L M + + + +L+ YA+ GK DQ ++ NP A
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K +VE+A F++M Y +L+ + ++L+ +M + G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + + KP +Y +++ Y G +
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEK-LFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
K+ M VG + TL+ Y
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGY 556
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/341 (17%), Positives = 136/341 (39%), Gaps = 36/341 (10%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K ++ A Y Q I E G +VY +L+ N ++AEE+ M
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLT 179
D+G + + N ++ + + + ++ L LM + VK +Y LI+ + +
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+++ M S G++P++ T + L Y R E A + KEME + T ++L
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
+ + + A+ ++ R++++ ++
Sbjct: 589 --------------------------------QGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y +L +K+ + + + + ++ ++ ++ G ++A + +
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV- 675
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
A N P + +Y L+ + +G + +++F M G
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 170/401 (42%), Gaps = 22/401 (5%)
Query: 56 LDFIERD---------YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCV 104
+DF E D Y + ++ +L+ QKAES + + V+ L+
Sbjct: 765 IDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYA 824
Query: 105 AGNNVKKAEEVFNRMKDKGFPVTSFACN---QLLILYKRLDKKKVADVLLLMEKENVKLT 161
A ++A +FN M G T N Q LI+ RLD+ V V+ ++ K++
Sbjct: 825 ASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYV--VVQELQDMGFKIS 882
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+ S +++D ++ ++ + ++ MK+ G P ++A+ G + EAML
Sbjct: 883 KSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLS 942
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLN 278
EME K +L +Y + + ++++ + + P D I + + +
Sbjct: 943 EMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDH 1002
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+ EE ++ M + Y +L+ + +++ + ++L +++ GC + +
Sbjct: 1003 RPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYH 1062
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++K++ G KA+ L + +P ++ L+M Y G EK+ +++
Sbjct: 1063 TMMKIYRNSGSHSKAER-LFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKE 1121
Query: 399 VGYVARFKQFQTLVQAYINAKTPAYGIRD--RMRADNVFPN 437
G + +++ AY+ GI+ +M+ + + P+
Sbjct: 1122 TGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPD 1162
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 5/292 (1%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILID 170
A E+ N ++ G + N L+ R ++ A V ME + + ++Y +I
Sbjct: 310 AIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMIS 369
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ G+ +Q+ ++S G PD+ + L + G EK + + +EM +
Sbjct: 370 VYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGK 429
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVF 287
T ++ +Y + G+ + ++++ +S NP I++ GK NK+ EA V
Sbjct: 430 DEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVM 489
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
M T K + K Y+AL+ YA + ++ M SG LA+ ++ +H+
Sbjct: 490 SEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRF 549
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
E ++A + L K + S Y L++ K + ++ M ++
Sbjct: 550 NEPKRAMT-LYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDMEEI 600
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 241 LYAELGKADQVARIWKLCESNPWL----DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LY ++G + + ES+ L + + IEA+G+L ++AE+V + +
Sbjct: 751 LYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCIT 810
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ K + AL++ YA + + + M G + L++ + G +++ +
Sbjct: 811 VDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDEL-YV 869
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+++ Q FK SS +L++D +A+ G+I +KI+H M+ GY ++ + +
Sbjct: 870 VVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMAR 926
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 107/252 (42%), Gaps = 4/252 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLM 153
+YR + G V+ E + + M++ GF N +L +Y + D +K V +
Sbjct: 920 LYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRI 979
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+++ ++ + +Y LI + + + ++ M+ G+EP T L +
Sbjct: 980 KEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLV 1039
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAA 270
E+AE + +E++ K R ++ +Y G + R++ + + P +
Sbjct: 1040 EQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLL 1099
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ ++G + +EAE V + +T LST Y++++ Y + + G + QM + G
Sbjct: 1100 MVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGL 1159
Query: 331 HIGPLAWDALVK 342
W ++
Sbjct: 1160 EPDHRIWTCFIR 1171
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK N+ A VF R + + + Y A++ VYA +K ++L+ M E GC
Sbjct: 231 GKANQEALAVEVFMRAEPSAGN-TVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDL 289
Query: 335 LAWDALVKLHVEGGEVEKADSI-LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++++ L+ ++ G + +I LL +++ +P +Y ++ ++ ++ K+F
Sbjct: 290 VSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVF 349
Query: 394 HRM 396
M
Sbjct: 350 DDM 352
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 89/452 (19%), Positives = 181/452 (40%), Gaps = 35/452 (7%)
Query: 4 PD-ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRR----------MYGK------ALQL 46
PD +S +S L +A EGN EI M + + MYGK ALQL
Sbjct: 394 PDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQL 453
Query: 47 SEWLETN-KKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVV--YRTLLANC 103
++++ + D + Y +D + K + +A + ++ + + Y L+
Sbjct: 454 YRDMQSSGRNPDAV--TYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGY 511
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQ 162
+AEE F+ M G A + +L ++ R ++ K A L M + + L
Sbjct: 512 AKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDH 571
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
Y++++ + N + + +V+ M+ + +IL K G ++A ML+
Sbjct: 572 SLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQTISSILVK----GECYDEAAKMLRR 627
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
D+ + R +L Y+ G+ + + + + + M L K ++
Sbjct: 628 AISDHFEIDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQ 687
Query: 283 AEAVFKRMSKTWKKLSTKHYT---ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
+A K S + T +T +L++ +++++++ + M G +++
Sbjct: 688 LDAALKEYSNNRELGFTGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKASESLYES 747
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
+V L+ + G E A ++ A+ S Y+ +++ Y + E + +RQ
Sbjct: 748 MVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQR 807
Query: 400 GYVARFKQFQTLVQAYINAKTPAYGIRDRMRA 431
K + L++AY A G +R RA
Sbjct: 808 CITVDRKVWNALIEAY-----AASGCYERARA 834
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 8/268 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ + +K +Y L+ ++ L + +V M+ G+ PD T ++L YV+ GR
Sbjct: 330 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 389
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMA 269
E A +LKEME +++ + + LL + + G K QV + K P
Sbjct: 390 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 449
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +GK N ++ A F RM + + L+ + H +++ + M G
Sbjct: 450 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 509
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSI--LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
C ++ ++ + G+ E+ D + LL + P ++ ++D Y K G +
Sbjct: 510 CLPCATTYNIMINSY---GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ M+ VG + L+ AY
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAY 594
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 141/348 (40%), Gaps = 11/348 (3%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVF 116
R Y + L K L+ AES + ++ + RG E Y L+ V + A V
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEK--RGVSPDEHTYSLLIDAYVNAGRWESARIVL 397
Query: 117 NRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ SF ++LL ++ R + +K VL M+ VK + Y ++ID G+
Sbjct: 398 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 457
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
N L + M SEGIEPD T L + GR AE M + ME T
Sbjct: 458 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 236 RLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
+++ Y + + D + R+ +S P + ++ +GK + +A + M
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
K S+ Y AL+ YA + + + + M G LA ++L+ E +
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 637
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
A ++ L+ ++N KP +Y +M + ++ M G
Sbjct: 638 AFAV-LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSY 165
N + A F+RM +G N L+ + + + VA+ + ME+ +Y
Sbjct: 458 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I+ G M +++ MKS+GI P+ T L Y GR A L+EM+
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEE 282
LK L+ YA+ G ++Q +++ S+ P L + I A+G+ + E
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 637
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A AV + M + K YT L+K K + ++M SGC
Sbjct: 638 AFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGC 685
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 135/305 (44%), Gaps = 16/305 (5%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K+ + LL +K+ LT +Y LI ++ND+ ++ M+ +G + D +++
Sbjct: 181 EKLYEAFLLSQKQT--LTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 238
Query: 204 AKHYVSGGRKEKAEAML-----KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC 258
+ S R K ++++ KE+E D L+ ++ +A+ G + ++ +
Sbjct: 239 IQ---SLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMA 295
Query: 259 ESNPW---LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
++ ++ I A + EAEA+F+ + ++ K T+ Y ALLK Y L
Sbjct: 296 QATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPL 355
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML 375
+ +V +M + G + L+ +V G E A I+LK + +P +
Sbjct: 356 KDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA-RIVLKEMEAGDVQPNSFVFSR 414
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADN 433
++ + RG+ T ++ M+ +G + + ++ + N A DRM ++
Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 474
Query: 434 VFPNK 438
+ P++
Sbjct: 475 IEPDR 479
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 139/366 (37%), Gaps = 48/366 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+ Y L+ C N+++KA + +M+ G+ S N L++ K+ V+LL
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGY--QSDFVNYSLVIQSLTRSNKIDSVMLLR 255
Query: 153 ----MEKENVKL-TQFSYKILIDIKGQSND------LTGMDQ------------------ 183
+E++ ++L Q I++ +S D L GM Q
Sbjct: 256 LYKEIERDKLELDVQLVNDIIMGF-AKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 314
Query: 184 -----------VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ E ++ GI+P + L K YV G + AE+M+ EME +
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 233 WTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
T LL+ Y G+ + + K E+ P V + + + ++ V K
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
M K + Y ++ + L +M G + W+ L+ H + G
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
A+ + +A ++ P ++Y ++++ Y + +++ +M+ G +
Sbjct: 495 HIVAEE-MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 553
Query: 410 TLVQAY 415
TLV Y
Sbjct: 554 TLVDVY 559
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 151/364 (41%), Gaps = 22/364 (6%)
Query: 67 LDLIAKLRGLQKAESYIQKIP--------ESFRGEVVYRTLLANCVAGNNVKKAEEVFNR 118
L + K R QKAE + +K Y T++ +K+A E F R
Sbjct: 263 LQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKR 322
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME--KENVKLTQFSYKILIDIKGQSN 176
M ++G T+ N ++ +Y + + +V LM+ K + +Y ILI + ++N
Sbjct: 323 MLEEGIVPTTVTFNTMIHVYG--NNGQFGEVTSLMKTMKFHCAPDTRTYNILISLHTKNN 380
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D+ + MK G++PD + L + ++AE ++ EM+ ++++ +T
Sbjct: 381 DIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAEELIAEMDDNDVEIDEYTQS 440
Query: 237 LLLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
L +Y E A+ + + W N + A I+A+G+ + EAE VF
Sbjct: 441 ALTRMYIE---AEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQ 497
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K+ + Y ++K Y K K +L + M G ++ LV++ +
Sbjct: 498 EVNKR-TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPD 556
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
KA L K ++ Y ++ + K G ++ E+++ M + + L
Sbjct: 557 KAKCYLEKMRETGYVSDCI-PYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 615
Query: 412 VQAY 415
+ A+
Sbjct: 616 INAF 619
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 11/247 (4%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+L Y I++ I G++ + + + M +GI+P +ST L Y GG K A
Sbjct: 183 ELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC 242
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAA----- 270
L +M ++ T ++L +Y E KA++ + W E+ VC+++
Sbjct: 243 WLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNT 302
Query: 271 -IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +GK +++EA FKRM + +T + ++ VY ++ + L+K M +
Sbjct: 303 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTM-KFH 361
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
C ++ L+ LH + ++E+A + K + KP SY ++ ++ R +
Sbjct: 362 CAPDTRTYNILISLHTKNNDIERAGT-YFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEA 420
Query: 390 EKIFHRM 396
E++ M
Sbjct: 421 EELIAEM 427
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 163/407 (40%), Gaps = 84/407 (20%)
Query: 39 MYGKALQLSEWLETNKKLDFI----ERDYASCLDLIAKLRGLQKAESYIQKI------PE 88
+YG Q E K + F R Y + L K +++A +Y +++ P+
Sbjct: 341 VYGNNGQFGEVTSLMKTMKFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPD 400
Query: 89 SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDKK- 144
V YRTLL + VK+AEE+ M D + + + L +Y + L+K
Sbjct: 401 P----VSYRTLLYAFSIRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSW 456
Query: 145 ------------------------------KVADVLLLMEKENVKLTQFSYKILIDIKGQ 174
A+ + + +E K T Y ++I G
Sbjct: 457 SWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGI 516
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
S ++ E+M S G+ PD T L + S +KA+ L++M
Sbjct: 517 SKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMR---------- 566
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+ V+ C A I ++ KL ++ AE V+K M +
Sbjct: 567 ------------ETGYVSDCIPYC----------AVISSFVKLGQLNMAEEVYKEMVEYN 604
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y L+ +AD + + V+ M E+G + +++L+KL+ + G +++A+
Sbjct: 605 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAE 664
Query: 355 SI---LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+I LL++ + ++ +++S +I + Y++R + E IF M+Q
Sbjct: 665 AIYRKLLRSCNETQYPDVYTSNCMI-NLYSQRSMVRKAEAIFESMKQ 710
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 116/267 (43%), Gaps = 10/267 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLLLM 153
Y TL+ + + KA+ +M++ G+ ++ + +L + +A+ V M
Sbjct: 541 TYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 600
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ N++ Y +LI+ + ++ VEAMK GI +S L K Y G
Sbjct: 601 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYL 660
Query: 214 EKAEAMLKEM-EGDNLKEHR--WTCRLLLPLYAELGKADQVARIWKLC----ESNPWLDV 266
++AEA+ +++ N ++ +T ++ LY++ + I++ E+N +
Sbjct: 661 DEAEAIYRKLLRSCNETQYPDVYTSNCMINLYSQRSMVRKAEAIFESMKQRREANEFTFA 720
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
M + + K + EEA + K+M + Y ++L +YA + + K+M
Sbjct: 721 MMLCM--YKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETFKEMV 778
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKA 353
SG + +L + ++ G +KA
Sbjct: 779 SSGIQPDDSTFKSLGTILIKLGMSKKA 805
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 112/268 (41%), Gaps = 8/268 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ + +K +Y L+ ++ L + +V M+ G+ PD T ++L YV+ GR
Sbjct: 301 LRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 360
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMA 269
E A +LKEME +++ + + LL + + G K QV + K P
Sbjct: 361 WESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 420
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +GK N ++ A F RM + + L+ + H +++ + M G
Sbjct: 421 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 480
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSI--LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
C ++ ++ + G+ E+ D + LL + P ++ ++D Y K G +
Sbjct: 481 CLPCATTYNIMINSY---GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 537
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ M+ VG + L+ AY
Sbjct: 538 DAIECLEEMKSVGLKPSSTMYNALINAY 565
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 141/348 (40%), Gaps = 11/348 (3%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVF 116
R Y + L K L+ AES + ++ + RG E Y L+ V + A V
Sbjct: 311 RAYNALLKGYVKTGPLKDAESMVSEMEK--RGVSPDEHTYSLLIDAYVNAGRWESARIVL 368
Query: 117 NRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ SF ++LL ++ R + +K VL M+ VK + Y ++ID G+
Sbjct: 369 KEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 428
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
N L + M SEGIEPD T L + GR AE M + ME T
Sbjct: 429 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 488
Query: 236 RLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
+++ Y + + D + R+ +S P + ++ +GK + +A + M
Sbjct: 489 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 548
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
K S+ Y AL+ YA + + + + M G LA ++L+ E +
Sbjct: 549 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 608
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
A ++ L+ ++N KP +Y +M + ++ M G
Sbjct: 609 AFAV-LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 655
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSY 165
N + A F+RM +G N L+ + + + VA+ + ME+ +Y
Sbjct: 429 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 488
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I+ G M +++ MKS+GI P+ T L Y GR A L+EM+
Sbjct: 489 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 548
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEE 282
LK L+ YA+ G ++Q +++ S+ P L + I A+G+ + E
Sbjct: 549 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 608
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A AV + M + K YT L+K K + ++M SGC
Sbjct: 609 AFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGC 656
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 135/305 (44%), Gaps = 16/305 (5%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K+ + LL +K+ LT +Y LI ++ND+ ++ M+ +G + D +++
Sbjct: 152 EKLYEAFLLSQKQT--LTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLV 209
Query: 204 AKHYVSGGRKEKAEAML-----KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC 258
+ S R K ++++ KE+E D L+ ++ +A+ G + ++ +
Sbjct: 210 IQ---SLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMA 266
Query: 259 ESNPW---LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
++ ++ I A + EAEA+F+ + ++ K T+ Y ALLK Y L
Sbjct: 267 QATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPL 326
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML 375
+ +V +M + G + L+ +V G E A I+LK + +P +
Sbjct: 327 KDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA-RIVLKEMEAGDVQPNSFVFSR 385
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADN 433
++ + RG+ T ++ M+ +G + + ++ + N A DRM ++
Sbjct: 386 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEG 445
Query: 434 VFPNK 438
+ P++
Sbjct: 446 IEPDR 450
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 139/366 (37%), Gaps = 48/366 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+ Y L+ C N+++KA + +M+ G+ S N L++ K+ V+LL
Sbjct: 169 LTYNALIGACARNNDIEKALNLIAKMRQDGY--QSDFVNYSLVIQSLTRSNKIDSVMLLR 226
Query: 153 ----MEKENVKL-TQFSYKILIDIKGQSND------LTGMDQ------------------ 183
+E++ ++L Q I++ +S D L GM Q
Sbjct: 227 LYKEIERDKLELDVQLVNDIIMGF-AKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 285
Query: 184 -----------VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ E ++ GI+P + L K YV G + AE+M+ EME +
Sbjct: 286 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 345
Query: 233 WTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
T LL+ Y G+ + + K E+ P V + + + ++ V K
Sbjct: 346 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 405
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
M K + Y ++ + L +M G + W+ L+ H + G
Sbjct: 406 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 465
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
A+ + +A ++ P ++Y ++++ Y + +++ +M+ G +
Sbjct: 466 HIVAEE-MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 524
Query: 410 TLVQAY 415
TLV Y
Sbjct: 525 TLVDVY 530
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 147/349 (42%), Gaps = 14/349 (4%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y ++ N + + A +F M+ + + + L+ K+ + D L
Sbjct: 158 YNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLI---THFGKEGMFDSALSWLQ 214
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME++ V Y LI++ + D + + +K GI PD + +
Sbjct: 215 KMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAK 274
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CM 268
+A +L EM + + LL +Y E GK + ++ ++ E LD+ C
Sbjct: 275 LFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCN 334
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+L+ +EA+ +F M K + Y LL+VY + ++ + L + M
Sbjct: 335 VMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRK 394
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ ++ ++K++ + E EKA + L++ Q +P +Y I+ + K G +
Sbjct: 395 DIEQNVVTYNTMIKIYGKSLEHEKATN-LVQEMQNRGIEPNAITYSTIISIWDKAGKLDR 453
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 454 AAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 502
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 193/461 (41%), Gaps = 82/461 (17%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALA-MANLRTRRMYGKALQLSEWLETNKKLDFIE 60
APD +STL T + +EG + AL+ + + R+ G + S +E ++KL
Sbjct: 187 APDRYTYSTLITHFGKEG----MFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLC--- 239
Query: 61 RDYASCLDLIAKLR--GLQ--------------KAESYIQK---IPESFRGEVV-----Y 96
DY+ + + ++L+ G+ KA+ + + +PE G V+ Y
Sbjct: 240 -DYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSY 298
Query: 97 RTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEK 155
TLL+ V +A VF+ M + P+ CN ++ +Y +LD K AD L M K
Sbjct: 299 STLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRK 358
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
++ SY L+ + G++ + M+ + IE + T + K Y EK
Sbjct: 359 MGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEK 418
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM------ 268
A +++EM+ ++ + T ++ ++ + GK D+ A ++ KL S +D +
Sbjct: 419 ATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIV 478
Query: 269 ---------------------------AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
AI ++EEA VF++ +
Sbjct: 479 AYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAFDAGEVKDITV 538
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ ++ +++ ++ + ++ +M +G ++ L +A KL E EKAD+I
Sbjct: 539 FGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLR----EFEKADAIY 594
Query: 358 LKAQQQNKFKPMFSS--YMLIMDQYAKRGDIHSTEKIFHRM 396
+ +++ +FS + ++ Y RGD + +F R+
Sbjct: 595 KEMEEEG---CVFSDEVHFQMLSLYGARGDFQMVDSLFERL 632
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
+ +ID+ ++ T + +V + M+ G PDS+ A++ EKA+A+ KEME
Sbjct: 539 FGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREFEKADAIYKEME 598
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD---VCMAAIEAWGKLNKVE 281
+ +L LY G V +++ +S+P ++ + + + + N++
Sbjct: 599 EEGCVFSDEVHFQMLSLYGARGDFQMVDSLFERLDSDPNINKKELHLVVASIYERANRLN 658
Query: 282 EAEAVFKRM 290
+A + RM
Sbjct: 659 DASQIMNRM 667
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 4/274 (1%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
++V +VL M + Y +ID + L +++ M S G++P+ L
Sbjct: 279 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTL 338
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNP 262
K S R E+ E +L EM + T +L+ + + G D+V + ++ E
Sbjct: 339 LKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGC 398
Query: 263 WLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
DV I + K ++EA + K M+ K +T YT +LK + +D
Sbjct: 399 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 458
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L+ QM + GC + P+ ++ L+ + G VE+A LLK N P SY ++D
Sbjct: 459 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGL 517
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K G ++ + M G + ++ A
Sbjct: 518 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 145/359 (40%), Gaps = 18/359 (5%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNR 118
R YA+ +D I K L+ A + ++P + VV Y TLL + ++ EE+
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 119 MKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M DK P+ N L+ + + +V ++L M + +Y +I+ +
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGL 417
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ ++++M + G +P++ + I+ K S R AE ++ +M + T
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 477
Query: 238 LLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + G +Q + K + +P L I+ GK K +EA + M
Sbjct: 478 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 537
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+T Y+++ + ++K + + ++ + ++A++ + GE E+A
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 597
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF-----------HRMRQVGYV 402
L + P S+Y +++ A G + +++ H M+ G V
Sbjct: 598 E-FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGIV 655
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 90/237 (37%), Gaps = 18/237 (7%)
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL------- 245
+ P++ T + + + GR A A+L EM R C + P+Y +
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMP-------RRGCAPIPPMYHVILEAACRG 170
Query: 246 -GKADQVARIWKLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
G V + L LDV C + A V+EA + + + + Y
Sbjct: 171 GGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSY 230
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
A+LK K ++L+++M C + ++ L+ G E+ +L +
Sbjct: 231 NAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQ-MV 289
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
++ P Y I+D K G + +I +RM G + TL++ +A+
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 346
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 153/365 (41%), Gaps = 10/365 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
+ + +D + K LQ+A+ ++ + + + Y +L+ V+ A+EVF RM
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 279
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ---FSYKILIDIKGQSND 177
+G N L+ + V LLLME+ +Y LID ++
Sbjct: 280 VRGIEPNVVTYNSLI--HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGR 337
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+++ MK++ PD T + L + R + A + +M + T
Sbjct: 338 APEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFST 397
Query: 238 LLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ Y G D R+ + + +P + + ++ + K+ ++ EA V KRM+K
Sbjct: 398 LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ + YTAL+ + + L+++M +G + + +L+ G++E+A
Sbjct: 458 CQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEAR 517
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+L + ++ K +Y ++MD + G + + ++ ++Q G R + L++
Sbjct: 518 KMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 577
Query: 415 YINAK 419
K
Sbjct: 578 LCQGK 582
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/316 (18%), Positives = 125/316 (39%), Gaps = 13/316 (4%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSY 165
N + +A F +MK KG + N L+ + ++ K A +LL M++ + +Y
Sbjct: 21 NRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 80
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+I + + ++ M G P+ T L G ++A +L EM
Sbjct: 81 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 140
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKL-------N 278
L+ +++ L+ + GK D +++ E N D C + A+ L
Sbjct: 141 RGLQPDKFSYDTLMAGLCKTGKIDMALKVF---EDNSNGD-CPPDVVAYSTLIAGLCKTG 196
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+++EA +F++M + + +TAL+ L + + +++ M + C + +
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+L+ + G+V A + K +P +Y ++ + + S + M
Sbjct: 257 SLIDGLCKTGQVRDAQEV-FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315
Query: 399 VGYVARFKQFQTLVQA 414
G + + TL+
Sbjct: 316 TGCLPDIITYNTLIDG 331
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 126/292 (43%), Gaps = 5/292 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL+++C G+ ++A EVF MK GF N LL +Y + + + A +VL M
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E + +Y LI + L ++ M +GI+PD T L + G+
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKD 412
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAA 270
+ A + +EM + + T L+ ++ G ++ +++ K+CE P +
Sbjct: 413 DYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTL 472
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ +G+ E VFK M + + L+ Y+ + + ++M ++G
Sbjct: 473 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGV 532
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++A++ GG E+++ +L + + + KP +Y ++ YA
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAE-MKDGRCKPNELTYCSLLHAYAN 583
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I + G+ + ++ ++++G+ D L Y S GR +A + K++E +
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 227 NLKEHRWTCRLLLPLYAELGKA-DQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEE 282
+ T ++L +Y ++G ++A + +S+ P L I + + + EE
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A VF+ M Y ALL VY + + +++K+M SG + +++L+
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 343 LHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G +++A + LK+Q K KP +Y ++ + K G K+F MR G
Sbjct: 370 AYARDGLLDEA--MELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGC 427
Query: 402 VARFKQFQTLVQAYIN 417
F L++ + N
Sbjct: 428 QPNICTFNALIKMHGN 443
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M G+ PD ST + GG E++E +L EM+ K + T LL YA GK
Sbjct: 527 MLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN-GK 585
Query: 248 ADQVARIWKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
+V R+ L E P + + + K + + E E F + +
Sbjct: 586 --EVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITT 643
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
A++ +Y +M+SK +++ + +SG +++L+ ++ EK++ IL +
Sbjct: 644 LNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREII 703
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ KP S+ ++ Y + G + +IF M+ G + T + +Y
Sbjct: 704 AKG-MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASY 756
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKI 167
V K E+ N +KD GF + N L+ +Y R + +K D+L + + +K S+
Sbjct: 657 VSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNT 716
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+I ++ + ++ MK G+ PD T Y S +A ++K M +
Sbjct: 717 VIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNG 776
Query: 228 LKEHRWTCRLLLPLYAELGKADQVA 252
K ++ T L+ + +L + D+ +
Sbjct: 777 CKPNQNTYNSLIDWFCKLNRRDEAS 801
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 107/272 (39%), Gaps = 14/272 (5%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y +LA G +++E+V MKD LL Y + K+V + L E
Sbjct: 538 TYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYA--NGKEVERMSALAE 595
Query: 155 KENVKLTQ---FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ + + K L+ + +S+ LT ++ ++ +G PD +T + Y G
Sbjct: 596 EIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIY---G 652
Query: 212 RK---EKAEAMLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLD 265
R+ K +L ++ T L+ +Y+ K++ + R P +
Sbjct: 653 RRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDII 712
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I A+ + +++EA +F M Y + YA M + D+VK M
Sbjct: 713 SFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
++GC +++L+ + ++A S +
Sbjct: 773 IKNGCKPNQNTYNSLIDWFCKLNRRDEASSFI 804
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 133/326 (40%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A + KA EV N M G N +L Y + K A L
Sbjct: 232 VTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKK 291
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y +L+D ++ ++ ++M G++P+ +T L + Y + G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ +L M + + + +L+ YA GK DQ ++ NP A
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K +VE+A F++M Y +L+ + ++L+ +M + G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + + KP +Y +++ Y G +
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEK-LFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
K+ M VG + TL+ Y
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGY 556
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/341 (17%), Positives = 136/341 (39%), Gaps = 36/341 (10%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K ++ A Y Q I E G +VY +L+ N ++AEE+ M
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLT 179
D+G + + N ++ + + + ++ L LM + VK +Y LI+ + +
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+++ M S G++P++ T + L Y R E A + KEME + T ++L
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
+ + + A+ ++ R++++ ++
Sbjct: 589 --------------------------------QGLFQTRRTAAAKELYVRITESGTQIEL 616
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y +L +K+ + + + + ++ ++ ++ G ++A + +
Sbjct: 617 STYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFV- 675
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
A N P + +Y L+ + +G + +++F M G
Sbjct: 676 AFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 15/318 (4%)
Query: 145 KVADVLLLMEK---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
VAD +M+K + F+Y +I + +DL QV M EG EP++ T +
Sbjct: 230 NVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYS 289
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----K 256
L GR +A +++EM + TC + ++G + R++ K
Sbjct: 290 TLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNK 349
Query: 257 LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
CE N + + + L KV A +F RMS+ +T Y AL+ + +++ +
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKV--AIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
++ M +GC + ++ ++K + G+ +KA +++ Q +Y I
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA-MLVMNNMLQRGHSANLVTYNTI 466
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNV 434
+ Y G+ S +I MR G + L+ + I+ A+G+ + M D +
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526
Query: 435 FPNKALAAQVAQVDAFRK 452
PN+ A +D + K
Sbjct: 527 CPNE--VTYTALIDGYCK 542
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 141/366 (38%), Gaps = 11/366 (3%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVAD 148
F V Y L+ V +K A V N M G N+++ Y L D KK
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
V+ M + +Y +I S + T ++++ M+ G +PD + L +
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLD 265
+ E A + EM D L + T L+ Y + K D + K P +
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I K N AE + K M + + YTA++ + S ++ +M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E GC L + +L++ + G+VE+A++ L +++ P +Y+ +++ Y G
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAEN-LFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRA--DNVFPNKALAAQ 443
+ RM + G + L++ N Y + D+ A +V PN + Q
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN----EYLLADQRLAALPDVVPNCSFGYQ 741
Query: 444 VAQVDA 449
DA
Sbjct: 742 TTDQDA 747
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 3/178 (1%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P L + A I A K V +AE + K++ ++ T YT+++ + L +
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
QMA+ GC + + L+ + G V +A L++ + P + +
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD-LIREMILHGILPTAHTCTGPIIALC 331
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
G ++F M+ G + L+ + A G+ RM D VFPN
Sbjct: 332 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 13/331 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEE-VFNRMKDKGFPVTSFACNQL---LILYKRLDKKKVADV 149
V L+ GN A + VF RM + G+ F+ N L L + K+ ++ ++
Sbjct: 127 VTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKK--SQEALEL 184
Query: 150 LLLMEKE---NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
L+ M + N SY +ID + ++ + M +G+ PD T L
Sbjct: 185 LIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDG 244
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLD 265
+KA A+L+ M + T +++ Y LG+ ++ R+ K + S D
Sbjct: 245 LCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 304
Query: 266 VCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
V + I+ + K+ + EA +VF M + +K ++ Y LL YA L +DL+
Sbjct: 305 VVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD 364
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
M G A++ L+ + + G V+KA + + +QN +P SY ++ K
Sbjct: 365 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTE-MRQNGLRPDVVSYSTVIHILCKT 423
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
G + F++M G F +L+
Sbjct: 424 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHG 454
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 124/331 (37%), Gaps = 15/331 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V Y T++ V KA +F+ M +G P N L+ L K K +L
Sbjct: 201 VSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQH 260
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V +Y I+I L ++++ M G++PD T ++L ++Y GR
Sbjct: 261 MFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGR 320
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC--ESNPW------L 264
+A ++ M K + +LL YA G V + L + P+ +
Sbjct: 321 CAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNI 380
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+C A+ K V++A F M + + Y+ ++ + + Q
Sbjct: 381 LIC-----AYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQ 435
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M G +++ +L+ GE +K + + + + P IMD K G
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG-IHPDAIFMNTIMDNLCKEG 494
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + F + +G + TL+ Y
Sbjct: 495 RVVEAQDFFDMVIHIGVKPDVVSYNTLIDGY 525
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 139/343 (40%), Gaps = 41/343 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMK 120
Y++ + ++ K ++ A + Q + E ++ + +L+ + KK EE+ M
Sbjct: 413 YSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMI 472
Query: 121 DKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
++G + N ++ L K + D ++ VK SY LID +
Sbjct: 473 NRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMD 532
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ ++ M S G+ PDS T L Y GR E A A+ +EM ++K T ++L
Sbjct: 533 ESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIML 592
Query: 240 PLYAELGK-----------------------------------ADQVARIWKLCESNPW- 263
+ G+ D+ R+++ S +
Sbjct: 593 HGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFE 652
Query: 264 LDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
LDV I A K+ +++EA+++F M Y+ ++K + + +L + +L
Sbjct: 653 LDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNL 712
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
M ++GC + +V+ +E G+V +A + L K ++N
Sbjct: 713 FLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKN 755
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 125/329 (37%), Gaps = 9/329 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V Y +L+ + KA + M DKG + N ++ Y L + + A LL
Sbjct: 236 VTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKK 295
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M ++ +Y +LI + V ++M +G +P+S+ IL Y + G
Sbjct: 296 MSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGA 355
Query: 213 KEKAEAMLKEMEGDNLK-EHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
+L M D + EHR +L+ YA+ G D+ + N P +
Sbjct: 356 LIDVRDLLDLMIRDGIPFEHR-AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYS 414
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I K +VE+A F +M + +T+L+ K ++L +M
Sbjct: 415 TVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR 474
Query: 329 GCHIGPLAWDALV-KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G H + + ++ L EG VE D KP SY ++D Y G +
Sbjct: 475 GIHPDAIFMNTIMDNLCKEGRVVEAQD--FFDMVIHIGVKPDVVSYNTLIDGYCFVGKMD 532
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ K RM +G + +L+ Y
Sbjct: 533 ESIKQLDRMVSIGLRPDSWTYNSLLNGYF 561
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 126/292 (43%), Gaps = 5/292 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL+++C G+ ++A EVF MK GF N LL +Y + + + A +VL M
Sbjct: 293 TYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEM 352
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E + +Y LI + L ++ M +GI+PD T L + G+
Sbjct: 353 EASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKD 412
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAA 270
+ A + +EM + + T L+ ++ G ++ +++ K+CE P +
Sbjct: 413 DYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTL 472
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ +G+ E VFK M + + L+ Y+ + + ++M ++G
Sbjct: 473 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGV 532
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++A++ GG E+++ +L + + + KP +Y ++ YA
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAE-MKDGRCKPNELTYCSLLHAYAN 583
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I + G+ + ++ ++++G+ D L Y S GR +A + K++E +
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 227 NLKEHRWTCRLLLPLYAELGKA-DQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEE 282
+ T ++L +Y ++G ++A + +S+ P L I + + + EE
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A VF+ M Y ALL VY + + +++K+M SG + +++L+
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 343 LHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G +++A + LK+Q K KP +Y ++ + K G K+F MR G
Sbjct: 370 AYARDGLLDEA--MELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGC 427
Query: 402 VARFKQFQTLVQAYIN 417
F L++ + N
Sbjct: 428 QPNICTFNALIKMHGN 443
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 10/234 (4%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M G+ PD ST + GG E++E +L EM+ K + T LL YA GK
Sbjct: 527 MLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN-GK 585
Query: 248 ADQVARIWKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
+V R+ L E P + + + K + + E E F + +
Sbjct: 586 --EVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITT 643
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
A++ +Y +M+SK +++ + +SG +++L+ ++ EK++ IL +
Sbjct: 644 LNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREII 703
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ KP S+ ++ Y + G + +IF M+ G + T + +Y
Sbjct: 704 AKG-MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASY 756
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKI 167
V K E+ N +KD GF + N L+ +Y R + +K D+L + + +K S+
Sbjct: 657 VSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNT 716
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+I ++ + ++ MK G+ PD T Y S +A ++K M +
Sbjct: 717 VIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNE 776
Query: 228 LKEHRWTCRLLLPLYAELGKADQ 250
K ++ T L+ + +L + D+
Sbjct: 777 CKPNQNTYNSLIDWFCKLNRRDE 799
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 134/318 (42%), Gaps = 15/318 (4%)
Query: 145 KVADVLLLMEK---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
VAD +M+K + F+Y +I + +DL QV M EG EP++ T +
Sbjct: 230 NVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYS 289
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----K 256
L GR +A +++EM + TC + ++G + R++ K
Sbjct: 290 TLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNK 349
Query: 257 LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
CE N + + + L KV A +F RMS+ +T Y AL+ + +++ +
Sbjct: 350 GCEPNVYTYTALISGLCVSGLLKV--AIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
++ M +GC + ++ ++K + G+ +KA +++ Q +Y I
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA-MLVMNNMLQRGHSANLVTYNTI 466
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNV 434
+ Y G+ S +I MR G + L+ + I+ A+G+ + M D +
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526
Query: 435 FPNKALAAQVAQVDAFRK 452
PN+ A +D + K
Sbjct: 527 CPNE--VTYTALIDGYCK 542
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 141/366 (38%), Gaps = 11/366 (3%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVAD 148
F V Y L+ V +K A V N M G N+++ Y L D KK
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
V+ M + +Y +I S + T ++++ M+ G +PD + L +
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLD 265
+ E A + EM D L + T L+ Y + K D + K P +
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I K N AE + K M + + YTA++ + S ++ +M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E GC L + +L++ + G+VE+A++ L +++ P +Y+ +++ Y G
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAEN-LFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRA--DNVFPNKALAAQ 443
+ RM + G + L++ N Y + D+ A +V PN + Q
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN----EYLLADQRLAALPDVVPNCSFGYQ 741
Query: 444 VAQVDA 449
DA
Sbjct: 742 TTDQDA 747
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 3/178 (1%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P L + A I A K V +AE + K++ ++ T YT+++ + L +
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
QMA+ GC + + L+ + G V +A L++ + P + +
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD-LIREMILHGILPTAHTCTGPIIALC 331
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
G ++F M+ G + L+ + A G+ RM D VFPN
Sbjct: 332 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 5/268 (1%)
Query: 90 FRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVA 147
R ++V T L N + +KA EVFN+MK + N L+ Y K+
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAV 313
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
+L MEK+ ++ S L+ G+ +T ++ ++EA +S GI+ ++ K Y
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSY 373
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCES--NPWL 264
+S G EKA + M N+K T +L+ ++LGK + R ++ + +S +
Sbjct: 374 LSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTK 433
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+V + I ++ K K+ EAE+ F M K+ YT L++ Y + DL K+
Sbjct: 434 EVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKE 493
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEK 352
M +G + +L++ +GGE E+
Sbjct: 494 MEVNGIPPDAIICSSLMEAFNKGGEPER 521
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 135/314 (42%), Gaps = 7/314 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSY 165
N V +A +F M++ + N L+ + R + + A +++ M + + T+ +Y
Sbjct: 25 NQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTY 84
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+I+ G + + ++ + M G+ PD T I+ +G + KA + + M+G
Sbjct: 85 NNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKG 144
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKV 280
N+ +T +++ ++G+ + ++ + + P + + + ++ +V
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQV 204
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
E +A+F M K + Y +LL YA M + + + ++G +++ +L
Sbjct: 205 ENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSL 264
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ + + EKA + K ++N KP SY ++D Y G + + H M + G
Sbjct: 265 LNAYGRSAQPEKAREVFNK-MKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDG 323
Query: 401 YVARFKQFQTLVQA 414
TL+ A
Sbjct: 324 IQPDVVSISTLLAA 337
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 160/448 (35%), Gaps = 93/448 (20%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKKKVADVLLL 152
Y ++ C A N KKA E+ +M + G N +L K K +
Sbjct: 82 TTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEI 141
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM--------KSEGIEPDSSTQAILA 204
M+ NV F+ I+I L + Q EA+ + PD T +
Sbjct: 142 MKGANVTSDTFTLNIIIHC------LVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIM 195
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--- 261
Y G+ E +A+ M + +K + LL YA G + I+ L + N
Sbjct: 196 HSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLR 255
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P + + + A+G+ + E+A VF +M K K + Y AL+ Y ML + L
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGL 315
Query: 322 VKQMAESGCH-----------------------------------IGPLAWDALVKLHVE 346
+ +M + G + +A+++ +K ++
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLS 375
Query: 347 GGEVEKADSILLKAQQQNK--------------------------FKPMFSS-------- 372
G+ EKA + ++ N F+ M S
Sbjct: 376 FGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEV 435
Query: 373 YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP---AYGIRDRM 429
Y ++ Y K+G + E F M++ G + TL+QAY NA A+ + M
Sbjct: 436 YSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAY-NAGGGWKRAWDLFKEM 494
Query: 430 RADNVFPNKALAAQVAQVDAFRKTAVSE 457
+ + P+ + + + ++AF K E
Sbjct: 495 EVNGIPPDAIICSSL--MEAFNKGGEPE 520
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 36/197 (18%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
V TLLA C + + E + + +G + + A N + Y D +K ++
Sbjct: 329 VSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTS 388
Query: 153 MEKENVKLTQFSYKILI--------------------DIKGQSND--------------- 177
M + NVK +Y ILI D K S
Sbjct: 389 MRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGK 448
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L+ + +MK G PD T L + Y +GG ++A + KEME + + C
Sbjct: 449 LSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSS 508
Query: 238 LLPLYAELGKADQVARI 254
L+ + + G+ ++V ++
Sbjct: 509 LMEAFNKGGEPERVLQL 525
>gi|297790207|ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297308804|gb|EFH39266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 842
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 151/364 (41%), Gaps = 22/364 (6%)
Query: 67 LDLIAKLRGLQKAESYIQKIP--------ESFRGEVVYRTLLANCVAGNNVKKAEEVFNR 118
L + K R QKAE + +K Y T++ +K+A E F R
Sbjct: 264 LQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKR 323
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME--KENVKLTQFSYKILIDIKGQSN 176
M ++G T+ N ++ +Y + + +V LM+ K + +Y ILI + ++N
Sbjct: 324 MLEEGIVPTTVTFNTMIHVYG--NNGQFGEVTSLMKTMKFHCAPDTRTYNILISLHTKNN 381
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D+ + MK G++PD + L + ++AE ++ EM+ ++++ +T
Sbjct: 382 DIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRRMVKEAEELIAEMDDNDVEIDEYTQS 441
Query: 237 LLLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
L +Y E A+ + + W N + A I+A+G+ + EAE VF
Sbjct: 442 ALTRMYIE---AEMLEKSWSWFRRVHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQ 498
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K+ + Y ++K Y K K +L + M G ++ LV++ +
Sbjct: 499 EVNKR-TVLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPD 557
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
KA L K ++ Y ++ + K G ++ E+++ M + + L
Sbjct: 558 KAKCYLEKMRETGYVSDCI-PYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 412 VQAY 415
+ A+
Sbjct: 617 INAF 620
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 11/247 (4%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+L Y I++ I G++ + + + M +GI+P +ST L Y GG K A
Sbjct: 184 ELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC 243
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAA----- 270
L +M ++ T ++L +Y E KA++ + W E+ VC+++
Sbjct: 244 WLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNT 303
Query: 271 -IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +GK +++EA FKRM + +T + ++ VY ++ + L+K M +
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTM-KFH 362
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
C ++ L+ LH + ++E+A + K + KP SY ++ ++ R +
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGT-YFKEMKGAGLKPDPVSYRTLLYAFSIRRMVKEA 421
Query: 390 EKIFHRM 396
E++ M
Sbjct: 422 EELIAEM 428
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 164/407 (40%), Gaps = 84/407 (20%)
Query: 39 MYGKALQLSEWLETNKKLDFI----ERDYASCLDLIAKLRGLQKAESYIQKI------PE 88
+YG Q E K + F R Y + L K +++A +Y +++ P+
Sbjct: 342 VYGNNGQFGEVTSLMKTMKFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPD 401
Query: 89 SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDK-- 143
V YRTLL VK+AEE+ M D + + + L +Y + L+K
Sbjct: 402 P----VSYRTLLYAFSIRRMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSW 457
Query: 144 ---KKV--------------------------ADVLLLMEKENVKLTQFSYKILIDIKGQ 174
++V A+ + + +E K T Y ++I G
Sbjct: 458 SWFRRVHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGI 517
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
S ++ E+M S G+ PD T L + S +KA+ L++M
Sbjct: 518 SKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMR---------- 567
Query: 235 CRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+ V+ C A I ++ KL ++ AE V+K M +
Sbjct: 568 ------------ETGYVSDCIPYC----------AVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y L+ +AD + + V+ M E+G + +++L+KL+ + G +++A+
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 355 SI---LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+I LL++ + ++ +++S+ + + ++R + E IF M+Q
Sbjct: 666 AIYRKLLRSCNETQYPDVYTSHCM-NNLCSERSMVRKAEAIFESMKQ 711
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 8/268 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ + +K +Y L+ ++ L + +V M+ G+ PD T ++L YV+ GR
Sbjct: 332 LRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGR 391
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMA 269
E A +LKEME +++ + + LL Y + G K QV + K P
Sbjct: 392 WESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNV 451
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +GK N ++ A F RM + + L+ + H +++ + M G
Sbjct: 452 VIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRG 511
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSI--LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
C ++ ++ + G+ E+ D + LL + P ++ ++D Y K G +
Sbjct: 512 CLPCATTYNIMINSY---GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 568
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ M+ VG + L+ AY
Sbjct: 569 DAIECLEEMKSVGLKPSSTMYNALINAY 596
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 125/312 (40%), Gaps = 5/312 (1%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLL 151
E Y L+ V + A V M+ SF ++LL Y+ R + +K VL
Sbjct: 376 EHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLK 435
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M+ VK + Y ++ID G+ N L + M SEGIEPD T L + G
Sbjct: 436 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 495
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
R AE M + ME T +++ Y + + D + R+ +S P +
Sbjct: 496 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 555
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
++ +GK + +A + M K S+ Y AL+ YA + + + + M
Sbjct: 556 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 615
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G LA ++L+ E +A ++ L+ ++N KP +Y +M +
Sbjct: 616 GLKPSLLALNSLINAFGEDRRDAEAFAV-LQYMKENGVKPDVVTYTTLMKALIRVDKFQK 674
Query: 389 TEKIFHRMRQVG 400
++ M G
Sbjct: 675 VPGVYEEMIMSG 686
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSY 165
N + A F+RM +G N L+ + + + VA+ + ME+ +Y
Sbjct: 460 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 519
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I+ G M +++ MKS+GI P+ T L Y GR A L+EM+
Sbjct: 520 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 579
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEE 282
LK L+ YA+ G ++Q +++ S+ P L + I A+G+ + E
Sbjct: 580 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 639
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A AV + M + K YT L+K K + ++M SGC
Sbjct: 640 AFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGC 687
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 132/302 (43%), Gaps = 10/302 (3%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K+ + LL +K+ LT +Y LI ++ND+ ++ M+ +G + D +++
Sbjct: 183 EKLYEAFLLSQKQT--LTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLV 240
Query: 204 AKHYVSGGRKEKA--EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
+ + + + + KE+E D L+ ++ +A+ G + ++ + ++
Sbjct: 241 IQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQAT 300
Query: 262 PW---LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
++ I A + EAEA+F+ + ++ K TK Y ALLK Y L
Sbjct: 301 GLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDA 360
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ +V +M + G + L+ +V G E A I+LK + +P + ++
Sbjct: 361 ELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA-RIVLKEMETGDVQPNSFVFSRLLA 419
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFP 436
Y RG+ T ++ M+ +G + + ++ + N A DRM ++ + P
Sbjct: 420 GYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 479
Query: 437 NK 438
++
Sbjct: 480 DR 481
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 125/309 (40%), Gaps = 11/309 (3%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ---FSYKILIDI 171
+ +R + G F+ N LL K AD LL M E + +Y +ID
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
+ D+ + + M GI PD T + + +KAEA L++M +
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290
Query: 232 RWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKL---NKVEEAEAVFK 288
WT L+ Y+ G+ + R++K L +A G L K++EA VF
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL--AWDALVKLHVE 346
M+ + YT +L YA L DL M G I P+ ++ L+K +
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG--IAPVICTFNVLIKAYAN 408
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
G ++KA I+ + + KP +YM ++ + G + + F++M G V
Sbjct: 409 CGMLDKA-MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKY 467
Query: 407 QFQTLVQAY 415
+ L+Q +
Sbjct: 468 AYHCLIQGF 476
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 139/360 (38%), Gaps = 44/360 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y+S + + K R + KAE+++++ +P+++ Y L+ + K+A VF
Sbjct: 259 YSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNW----TYNNLIYGYSSTGQWKEAVRVF 314
Query: 117 NRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ + A N L+ L K K+ DV M + FSY I+++
Sbjct: 315 KEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATK 374
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L M + + M +GI P T +L K Y + G +KA + EM +K H T
Sbjct: 375 GCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVT- 433
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
Y M I A ++ K+++A F +M
Sbjct: 434 ------Y-------------------------MTVIAALCRIGKMDDAMEKFNQMIDQGV 462
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
Y L++ + H L K K+L+ ++ +G + + + +++ + G V A +
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
I P Y ++MD Y G + ++F M G + TLV Y
Sbjct: 523 IF-DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 146/367 (39%), Gaps = 55/367 (14%)
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVV-----YRTLLANCVAGNNVKKAEEVFNRMKD 121
+ +IA L + K + ++K + VV Y L+ ++ KA+E+ + + +
Sbjct: 435 MTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 494
Query: 122 KG--FPVTSFA--CNQLLILYKRLDKKKVADVLLLMEKENVKL--TQFSYKILIDIKGQS 175
G + F N L L + +D + + D+ + NV L Y +L+D
Sbjct: 495 NGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV-----NVGLHPDAVVYNMLMDGYCLV 549
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
+ +V +AM S GIEP+ L Y GR ++ ++ +EM +K
Sbjct: 550 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 609
Query: 236 RLLLPLYAELGKADQV-ARIWKLCESNPWLDVCMAAIEAWG------------------- 275
+++ E G+ + ++ ES ++ C +I G
Sbjct: 610 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 669
Query: 276 --------KLN----------KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
LN +VEEA+ +F +S++ Y+ ++ ++ +
Sbjct: 670 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEE 729
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+D+ M +GC + +V+ ++ E+ +A + L K ++N F + ML++
Sbjct: 730 AEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN-FSLEHLTAMLLV 788
Query: 378 DQYAKRG 384
D ++ +G
Sbjct: 789 DLFSSKG 795
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 143/327 (43%), Gaps = 11/327 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y +L N + A +F+ M+ + + + L+ + K+ + D L
Sbjct: 26 YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSF---GKEGMFDSALSWLQ 82
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME++ V Y LI++ + D + + +K GI PD + Y
Sbjct: 83 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 142
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CM 268
+A ++KEM + + + LL +Y E K + ++ ++ E N LD+ C
Sbjct: 143 LFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCN 202
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+L+ V+EA+ +F + K + + Y +L+VY + ++ + L + M
Sbjct: 203 IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 262
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ ++ ++K++ + E EKA + L++ Q +P +Y I+ + K G +
Sbjct: 263 DIEQNVVTYNTMIKIYGKTMEHEKATN-LVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 321
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
+F ++R G +QT++ AY
Sbjct: 322 AATLFQKLRSSGVEIDQVLYQTMIVAY 348
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 193/454 (42%), Gaps = 68/454 (14%)
Query: 3 APDISIHSTL-TKYAEEG-------------NDLSRAEIALAMANL--RTRRM--YGKAL 44
APD +STL T + +EG D ++ L +NL +RR+ Y KA+
Sbjct: 55 APDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVL-YSNLIELSRRLCDYSKAI 113
Query: 45 QLSEWLE-TNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
+ L+ + D + Y S +++ K + ++A I+++ E+ V Y TLL+
Sbjct: 114 SIFSRLKRSGITPDLVA--YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 171
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL---------- 151
V + +A VF MK+ + CN ++ +Y +LD K AD L
Sbjct: 172 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 231
Query: 152 --------------------------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
LM++++++ +Y +I I G++ + +V
Sbjct: 232 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 291
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M+S GIEP++ T + + + G+ ++A + +++ ++ + + ++ Y +
Sbjct: 292 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 351
Query: 246 GKADQVARI---WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
G R+ KL ++ P AI K + EEA VF++ ++ + +
Sbjct: 352 GLMGHAKRLLHELKLPDNIPR----ETAITILAKAGRTEEATWVFRQAFESGEVKDISVF 407
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
++ +Y+ ++ ++ ++M +G ++ + + E EKAD++ + Q+
Sbjct: 408 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQE 467
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ P + ++ Y+ + D E +F R+
Sbjct: 468 EGCVFPD-EVHFQMLSLYSSKKDFEMVESLFQRL 500
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 143/361 (39%), Gaps = 16/361 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGF----PVTSFACNQLLILYKRLDKKKVADV 149
V Y T+++ N++KA E+ M KG + ++ N L+ + R + + A
Sbjct: 133 VTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTY--NTLINAFYRASRIREACA 190
Query: 150 LL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
M+ + + IL+ + D+ ++++ MK G PD T +
Sbjct: 191 FREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALC 250
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVC 267
G+ +A +LK M + T LL + + G + + + +C N DV
Sbjct: 251 VAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVI 307
Query: 268 MAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I G ++ +V+ A + + + + YT+L+ + + LVK+M
Sbjct: 308 TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM 367
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ GC G + + +LV + G V KA IL + N P+F +Y +++ K G
Sbjct: 368 SVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLF-TYNIVLGGLIKDGS 426
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQ 443
I + + GYV + TL+ A A + D M + FPN
Sbjct: 427 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGS 486
Query: 444 V 444
V
Sbjct: 487 V 487
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/439 (22%), Positives = 172/439 (39%), Gaps = 49/439 (11%)
Query: 11 TLTKYAEEGND-LSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDL 69
L +Y +G+ L R + + + + + ++ EWL +F E D+ +
Sbjct: 96 VLRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITA 155
Query: 70 IAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
KL AE + + + S + Y L+ + G AE +F RM+ G +
Sbjct: 156 YGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPS 215
Query: 128 SFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
+ +L + DK K E E V ++ L+D
Sbjct: 216 AITYQIILKTFVEGDKFK--------EAEEV------FETLLD----------------- 244
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL---YAE 244
K ++PD ++ Y G EKA + M G + + T L+ Y E
Sbjct: 245 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE 304
Query: 245 LGKA-DQVARIWKLCESNPWLDVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
+ K DQ+ R S+ DV A I+A+G+ + EEA +VF+ M + + K
Sbjct: 305 VSKIYDQMQR------SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 358
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y LL +A M+ + K + K M ++ ++ +V ++E A+ K
Sbjct: 359 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK-FFKRI 417
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT- 420
+ + F+P +Y ++ YAK D+ +++ +MR G A T++ A K
Sbjct: 418 KVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNF 477
Query: 421 -PAYGIRDRMRADNVFPNK 438
A G M + V P++
Sbjct: 478 GSALGWYKEMESCGVPPDQ 496
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 141/319 (44%), Gaps = 11/319 (3%)
Query: 134 LLILYKRLDKKKVAD-VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ Y +L A+ VL ++ K SY L++ G+ + + M+S G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEM---EGDNLKEHRWTCRLLLPLYAELGKAD 249
EP + T I+ K +V G + ++AE + + + + LK + +++ +Y + G +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 250 QVARIWK--LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
+ +++ + + P V ++ ++ K E ++ +M ++ + Y L+K
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYK--EVSKIYDQMQRSDIQPDVVSYALLIK 329
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
Y + + + ++M ++G A++ L+ G VE+A ++ K+ ++++
Sbjct: 330 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF-KSMRRDRIF 388
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGI 425
P SY ++ Y D+ EK F R++ G+ + TL++ Y A +
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 426 RDRMRADNVFPNKALAAQV 444
++MR + N+ + +
Sbjct: 449 YEKMRLSGIKANQTILTTI 467
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 5/262 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
+Y ++ N +KA +VF+ M KG P ++ N L+ K+V+ + M+
Sbjct: 256 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF--ETSYKEVSKIYDQMQ 313
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ +++ SY +LI G++ V E M G+ P IL + G E
Sbjct: 314 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 373
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAI 271
+A+ + K M D + W+ +L Y + + +K + + P + I
Sbjct: 374 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 433
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ + K N VE+ V+++M + K + T ++ K K+M G
Sbjct: 434 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 493
Query: 332 IGPLAWDALVKLHVEGGEVEKA 353
A + L+ L E+E+A
Sbjct: 494 PDQKAKNVLLSLASTQDELEEA 515
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 4/274 (1%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
++V +VL M + Y +ID + L +++ M S G++P+ L
Sbjct: 316 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTL 375
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNP 262
K S R E+ E +L EM + T +L+ + + G D+V + ++ E
Sbjct: 376 LKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 435
Query: 263 WLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
DV I + K ++EA + K M+ K +T YT +LK + +D
Sbjct: 436 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 495
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L+ QM + GC + P+ ++ L+ + G VE+A LLK N P SY ++D
Sbjct: 496 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGL 554
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K G ++ + M G + ++ A
Sbjct: 555 GKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 588
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/374 (19%), Positives = 151/374 (40%), Gaps = 20/374 (5%)
Query: 46 LSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANC 103
L++ +E D R YA+ +D I K L+ A + ++P + VV Y TLL
Sbjct: 322 LAQMVEHGCTPDI--RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGL 379
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQ 162
+ ++ EE+ M DK P+ N L+ + + +V ++L M +
Sbjct: 380 CSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDV 439
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+Y +I+ + + ++++M + G +P++ + I+ K S R AE ++ +
Sbjct: 440 ITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQ 499
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNK 279
M + T L+ + G +Q + K + +P L I+ GK K
Sbjct: 500 MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGK 559
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
+EA + M +T Y+++ + ++K + + ++ + ++A
Sbjct: 560 TDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNA 619
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF------ 393
++ + GE E+A L + P S+Y +++ A G + +++
Sbjct: 620 VISSLCKRGETERAIE-FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSK 678
Query: 394 -----HRMRQVGYV 402
H M+ G V
Sbjct: 679 GALRKHLMKHFGIV 692
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 90/237 (37%), Gaps = 18/237 (7%)
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL------- 245
+ P++ T + + + GR A A+L EM R C + P+Y +
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMP-------RRGCAPIPPMYHVILEAACRG 207
Query: 246 -GKADQVARIWKLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
G V + L LDV C + A V+EA + + + + Y
Sbjct: 208 GGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSY 267
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
A+LK K ++L+++M C + ++ L+ G E+ +L +
Sbjct: 268 NAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQ-MV 326
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
++ P Y I+D K G + +I +RM G + TL++ +A+
Sbjct: 327 EHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAE 383
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y LI+ G S + V + M G+ PD T I+ + SG +
Sbjct: 212 MLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQ 271
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA + + M+G +++ T +++ +L + D+ I+ K E P +
Sbjct: 272 YSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTF 331
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ I + +VE EA F M K + Y AL+ YA M ++ ++ +
Sbjct: 332 TSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQ 391
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G +++ +L+ + + KA I + ++NK KP SY ++D Y G +
Sbjct: 392 NGFRPDIVSYTSLLNAYGRSQKPHKARQIFDR-MKRNKLKPNLVSYNALIDAYGSNGLLA 450
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
KI M Q G TL+ A
Sbjct: 451 DAIKILREMEQEGIQPNVVSICTLLAA 477
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 121/311 (38%), Gaps = 40/311 (12%)
Query: 86 IPESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK- 143
I E + +V Y L+ A +A FN +K GF + LL Y R K
Sbjct: 355 IAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKP 414
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
K + M++ +K SY LID G + L +++ M+ EGI+P+ + L
Sbjct: 415 HKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTL 474
Query: 204 AKHYVSGGRKEKAEAMLK--EMEGDNLKEHRWTCRL-----------LLPLYAELGK--- 247
RK K + +L EM G L + + + LY + K
Sbjct: 475 LAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKI 534
Query: 248 -ADQV---------ARIWKLCESNPWLDVCM------------AAIEAWGKLNKVEEAEA 285
D V ++ K E+ +++ M +AI A+ K ++ EAE+
Sbjct: 535 KTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAES 594
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
F M + YTA+L Y + K L ++M S + +A AL++
Sbjct: 595 TFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFN 654
Query: 346 EGGEVEKADSI 356
+GG+ + S+
Sbjct: 655 KGGQPGRVLSL 665
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/427 (18%), Positives = 153/427 (35%), Gaps = 82/427 (19%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKK 144
IP S Y L+ C + N K+A V +M + G N +L +K
Sbjct: 217 IPPS---RSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYS 273
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE--PDSSTQAI 202
K LM+ +++ + I+I + ++ +M+ + E PD T
Sbjct: 274 KALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTS 333
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN- 261
+ Y G+ E EA M + LK + + L+ YA G ++ + + N
Sbjct: 334 IIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNG 393
Query: 262 --PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
P + + + A+G+ K +A +F RM + K + Y AL+ Y + +L+
Sbjct: 394 FRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAI 453
Query: 320 DLVKQMAESGCH-----------------------------------IGPLAWDALVKLH 344
++++M + G + +A++A +
Sbjct: 454 KILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSC 513
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD-------------------------- 378
+ GE +KA L K+ ++ K K +Y +++
Sbjct: 514 MNVGEYDKAIG-LYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLS 572
Query: 379 ---------QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRD 427
Y+K+G I E F+ M+ G + ++ AY A+ AY + +
Sbjct: 573 KEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFE 632
Query: 428 RMRADNV 434
M A ++
Sbjct: 633 EMEASSI 639
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 8/170 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y + +C+ KA ++ M+ K S L+ ++ K + L M
Sbjct: 504 VAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSK--YGEALSFM 561
Query: 154 EK---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
E+ + L++ Y I + + + MKS G PD T + Y +
Sbjct: 562 EEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAA 621
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES 260
EKA A+ +EME ++K C L+ K Q R+ L ES
Sbjct: 622 ENWEKAYALFEEMEASSIKLDTIACAALM---RSFNKGGQPGRVLSLAES 668
>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 913
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 142/345 (41%), Gaps = 23/345 (6%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
P + +V + L C+ G+ +++A V M++ G T FA + + L ++
Sbjct: 231 PNDYTYAIVIKAL---CINGS-LEEAMYVIKEMEESGITPTGFAYTAYI---EGLCVNEM 283
Query: 147 AD----VLLLMEKENVKLTQFSYKILIDIKGQSNDL--TGMDQVVEAMKSEGIEPDSSTQ 200
+D VL + N+ L ++Y + + +G N+L + V+ M+ EG+ PD
Sbjct: 284 SDLGYQVLQAWKGANIPLDMYAYTVAV--RGFCNELKFDKAESVLRDMEKEGMVPDMHCY 341
Query: 201 AILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES 260
L + G KA A L EM +K + +L ELG +V + +S
Sbjct: 342 TALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKS 401
Query: 261 -NPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
+LD ++A KL K+EEA + M + HYT L+ Y +
Sbjct: 402 LGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVD 461
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ ++M E+G I + +D LV G +A + LL Q K KP +Y +++
Sbjct: 462 AFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALN-LLDYMQTQKLKPNSITYNVVV 520
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPA 422
+ G + E +F+ + + ++ Y A A
Sbjct: 521 ESLCMGGKVKEAEAVFNSIED----KSLDNYFAMINGYCKANHTA 561
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 123/300 (41%), Gaps = 53/300 (17%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR-----LL 238
V + +K G+ P+ T AI+ K G E+A ++KEME + + L
Sbjct: 220 VYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLC 279
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLN--KVEEAEAVFKRMSKTWKK 296
+ ++LG QV + WK +N LD+ + G N K ++AE+V + M K
Sbjct: 280 VNEMSDLGY--QVLQAWK--GANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMV 335
Query: 297 LSTKHYTAL----------LKVYAD-HKMLSKGK------------------------DL 321
YTAL LK YA ++M+SKG D
Sbjct: 336 PDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQ 395
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQQNKFKPMFSSYMLIMDQ 379
Q G + ++++ +V + G++E+A ++L +K +Q N Y +++
Sbjct: 396 FNQFKSLGLFLDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINM---DVMHYTTLING 452
Query: 380 YAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPN 437
Y +G++ K+F MR+ G + LV + T A + D M+ + PN
Sbjct: 453 YCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPN 512
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 136/357 (38%), Gaps = 49/357 (13%)
Query: 89 SFRGEVVYRTLLANCVAGNNV----------KKAEEVFNRMKDKGFPVTSFACNQLLILY 138
+F E++ + + NCV ++ + + FN+ K G + + N ++
Sbjct: 359 AFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDAL 418
Query: 139 KRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
+L K + A LL M+ + + + Y LI+ ++ +V E M+ GIE D
Sbjct: 419 CKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDV 478
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
T +L + G +A +L M+ LK + T +++ GK + ++
Sbjct: 479 VTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNS 538
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
E LD A I + K N A +F R+S H S
Sbjct: 539 IEDKS-LDNYFAMINGYCKANHTAGAAKLFFRLS-----------------VKGHVKRSC 580
Query: 318 GKDLVKQMAESGCHIGPLAW-DALVKLHVE----------------GGE--VEKADSILL 358
+L+K + E G + G L + ++ L+VE GG + KA S+
Sbjct: 581 CYNLLKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVF- 639
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + P +Y +++ Y + + +FH M+Q G F L+ +
Sbjct: 640 DMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLLDGH 696
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 73/396 (18%), Positives = 146/396 (36%), Gaps = 98/396 (24%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIP-ESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y + +D + KL L++A + + ++ + +V++ T L N C GN V A +VF M
Sbjct: 411 YNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGN-VVDAFKVFEEM 469
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
++ G + DV+ +Y +L+ ++ T
Sbjct: 470 RENGIEI---------------------DVV-------------TYDVLVSGFCRNGLAT 495
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH-------- 231
+++ M+++ ++P+S T ++ + GG+ ++AEA+ +E +L +
Sbjct: 496 EALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSLDNYFAMINGYC 555
Query: 232 ----------------------RWTCRLLLPLYAELGKADQVARIW-----------KLC 258
R C LL E G D + + K
Sbjct: 556 KANHTAGAAKLFFRLSVKGHVKRSCCYNLLKNLCEEGDNDGILMLLETMLNLNVEPSKFI 615
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
+ +C A G + +A++VF + K YT ++ Y L +
Sbjct: 616 YGKLFTSLCRA-----GGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEA 670
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLH-------------VEGGEVEKADSILLKAQQQN- 364
DL M + G + + L+ H +GG + D++ + + ++
Sbjct: 671 VDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDT 730
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ KP Y +++D Y K +H +F M + G
Sbjct: 731 EIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERG 766
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 100/265 (37%), Gaps = 20/265 (7%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK 155
Y ++ N+ A ++F R+ KG S N L L + D + +L M
Sbjct: 547 YFAMINGYCKANHTAGAAKLFFRLSVKGHVKRSCCYNLLKNLCEEGDNDGILMLLETMLN 606
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGM---DQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
NV+ ++F Y L ++ GM V + + G PD I+ Y
Sbjct: 607 LNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNC 666
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
++A + +M+ +K T +LL A I K+ +A
Sbjct: 667 LKEAVDLFHDMKQRGIKPDLVTFTVLL-------DGHHKAHIKKV----------YSAAN 709
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
A G + +A A++ M T K YT L+ Y L + +M E G
Sbjct: 710 AKGGNEDIFDALAIWTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEP 769
Query: 333 GPLAWDALVKLHVEGGEVEKADSIL 357
+ + AL+ + G+V++A ++L
Sbjct: 770 DIITYTALLSGCCQRGDVDRAVNLL 794
>gi|255551050|ref|XP_002516573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544393|gb|EEF45914.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 396
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 6/264 (2%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M G +PD T +A YV AE M+ EM+ ++ + TC ++ Y + G+
Sbjct: 1 MVVSGRQPDVVTYNTIATAYVRNEETNLAEEMISEMQNTGVQPNERTCGTVISGYCKEGR 60
Query: 248 ADQVARI---WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
+ R K +P L V + I+ + + + V K M + K ++
Sbjct: 61 IKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEFNVKPDVITFST 120
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
++ ++ ++K +++ M ++G A+ L K +V E EKA+ LL ++
Sbjct: 121 IMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQ-LLTTMMES 179
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--A 422
F P + ++ + + ++F +M + G K F+TL+ + AK P A
Sbjct: 180 GFHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKA 239
Query: 423 YGIRDRMRADNVFPNKALAAQVAQ 446
I MR NV P K+ VA+
Sbjct: 240 EDILQIMREYNVEPKKSTMLLVAE 263
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKE 156
T+++ +K+A +RMK+ G N L+ + +D+ V +VL LME+
Sbjct: 50 TVISGYCKEGRIKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEF 109
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
NVK ++ +++ ++ + ++ + M GI+PD +ILAK YV EKA
Sbjct: 110 NVKPDVITFSTIMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKA 169
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGK 276
E +L M +P + + I W
Sbjct: 170 EQLLTTMMESGF--------------------------------HPNVVIFTTVISGWCS 197
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
++++ A VF +M + + K + L+ +++ K K +D+++ M E
Sbjct: 198 TDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKAEDILQIMRE 248
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 142/362 (39%), Gaps = 41/362 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY----------KRLDK 143
V Y ++ C N+ KA E++N+MK+K T F N L+ Y K D+
Sbjct: 365 VTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDE 424
Query: 144 K---KVADVLLL----------------------MEKENVKLTQFSYKILIDIKGQSNDL 178
+A+V M ++ V+ + SY +I Q D+
Sbjct: 425 AVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+ V M +G++P+ T ++L Y G E A + M G+N+ +TC ++
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNII 544
Query: 239 LPLYAELGKADQVA-RIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTW 294
+ + G+ + R+ KL + ++ CM I+ + K V A AV+ M K
Sbjct: 545 INGLCKAGRTSESQDRLKKLVQEG-FIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIG 603
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ YT L+ + + ++ +M G + + AL+ G++ A
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNA- 662
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
S LL Q+ P Y ++ + K ++ + + RM G + + TL+
Sbjct: 663 SQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISG 722
Query: 415 YI 416
+
Sbjct: 723 LL 724
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/409 (19%), Positives = 166/409 (40%), Gaps = 20/409 (4%)
Query: 43 ALQLSEWLETNKKLDF--IERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRT 98
++ ++ +E++++LDF R + L+ K + + A + E V
Sbjct: 135 SVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNI 194
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK-EN 157
L+ V N +++A +V+N+M KG + ++ R K + A+ K +
Sbjct: 195 FLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKG 254
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
V+L +Y I+I+ + D ++ M+ +G P + + G+ +A
Sbjct: 255 VELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAV 314
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK------LCESNPWLDVCMAAI 271
+ EM + L+ Y + G D ++ +C +N V A I
Sbjct: 315 KVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNN----VTYAVI 370
Query: 272 EAW-GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
W K +++A ++ +M + + +L++ Y + + L + G
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI 430
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+++L+ + G++ +A SI K ++ +P SY ++ + ++GD+ S
Sbjct: 431 A-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKG-VRPSVVSYNNMILGHCQQGDMDSAN 488
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
+F M + G + L+ Y A+G+ DRMR +N+ P+
Sbjct: 489 GVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPS 537
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 121/331 (36%), Gaps = 38/331 (11%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKK 145
P F ++ L C AG ++++ ++ +GF T N ++ + K
Sbjct: 536 PSDFTCNIIINGL---CKAGR-TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNS 591
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
V M K V F+Y LI+ +SN++ +V++ MK++GIE D + L
Sbjct: 592 ALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALID 651
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD 265
+ G A +L E++ L ++ +Y+ +
Sbjct: 652 GFCRKGDMVNASQLLSELQEVGLSPNKV-------VYSSM-------------------- 684
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I + KL +E A + KRM + YT L+ L +L +M
Sbjct: 685 -----ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEM 739
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
G + + L+ G++E A I L+ + P Y ++ + K G+
Sbjct: 740 LAKGIMPDLITYSVLIHGLCNKGQLENAQKI-LEDMDRKCMTPTVFIYNTLITGHFKEGN 798
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ ++ + M G V + LV +
Sbjct: 799 LQEAFRLHNEMLDKGLVPDDTTYDILVNGKV 829
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 141/354 (39%), Gaps = 16/354 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
V Y T++ ++ A F +++ G + ++ CN LL+ Y R D +K +L++
Sbjct: 180 VTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMM 239
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + ++SY ILI ++ + +V M +G + T +L K GR
Sbjct: 240 MPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGR 299
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVC 267
A +L EM + WT ++ Y + G+ I L C + W
Sbjct: 300 IHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNS 359
Query: 268 MAAIEAWGKLNKVEEA--EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ GKL++ EE A+ + + T +T L+ Y + + + M
Sbjct: 360 LIYGLCGGKLDEAEELLNGAIARGFTPT-----VITFTNLINGYCKAERIDDALRVKSNM 414
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
S C + A+ L+ + ++ +++A L N P +Y I+D Y K G
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCRLKEAKET-LNEMFANGLAPNVVTYTSIIDGYCKVGM 473
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
+ + ++F M G + +L+ I K A + +M+ D + P
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPG 527
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/398 (19%), Positives = 150/398 (37%), Gaps = 47/398 (11%)
Query: 47 SEWLETNKKLDFIERDYASCLD-LIAKLRGLQKAESYIQKIPESFRGEVV-YRTLLANCV 104
S + +N KLD + Y ++ LI K R + E+ + VV Y +++
Sbjct: 412 SNMISSNCKLDL--QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYC 469
Query: 105 AGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLT 161
V A EVF M+ +G ++ L+ Y + KK+ + L M+++ +
Sbjct: 470 KVGMVGAALEVFKLMEHEGCHPNAWTYGSLI--YGLIQDKKLHKAMALITKMQEDGITPG 527
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+Y LI + + ++ ++ E M+ G+ PD +L GR E+A + L
Sbjct: 528 VITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV 587
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVE 281
+G L + +T + ++ + K +
Sbjct: 588 R-KGVVLTKVTYT----------------------------------SLVDGFSKAGNTD 612
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
A + ++M K Y+ LL+ K L++ ++ QM SG +A+ ++
Sbjct: 613 FAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIII 672
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ G+ + A S L + KP ++Y + + Y K G I E + M + G
Sbjct: 673 SEMIKEGKHDHAKS-LFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGV 731
Query: 402 VARFKQFQTLVQ--AYINAKTPAYGIRDRMRADNVFPN 437
+ + ++ A+ RM + PN
Sbjct: 732 TPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPN 769
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 135/335 (40%), Gaps = 20/335 (5%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADV 149
R E Y L+ V++A + M G S + +L K L K+ ++ D
Sbjct: 247 RNEYSYTILIQGLCEARCVREALVLVFMMVHDG---CSLNLHTYTLLIKGLCKEGRIHDA 303
Query: 150 LLLMEK---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
L+++ V + ++Y +ID +S + + M+ G PD T L +
Sbjct: 304 RGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI-Y 362
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV 266
+ GG+ ++AE +L T L+ Y + + D R+ +SN
Sbjct: 363 GLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV----KSNMISSN 418
Query: 267 CMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
C ++A+G L +++EA+ M + YT+++ Y M+
Sbjct: 419 CKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAAL 478
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
++ K M GCH + +L+ ++ ++ KA +++ K Q++ P +Y ++
Sbjct: 479 EVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITK-MQEDGITPGVITYTTLIQG 537
Query: 380 YAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K+ + + ++F M Q G + + L A
Sbjct: 538 QCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDA 572
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 19/218 (8%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K + +Y + I + + + ++ M+ +G+ PD T I G ++A +
Sbjct: 697 KPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFS 756
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKAD-------------QVARIWKLCES----- 260
LK M + + + WT LLL + ++ + ++ +W+L E
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHG 816
Query: 261 -NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
NP + + I + K ++EEA + M + + YT L+K D K+ K
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAV 876
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
V M E G ++ L+ + G+ ++A S+
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLF 914
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 4/268 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TLL+ C +AE VF M D G + L+ + +L + +KV+D+L
Sbjct: 248 VTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSE 307
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M SY +L++ +S + V M++ G P+++T ++L + GR
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN--PWLDVCMA 269
+ + EM+ N T +L+ ++ E G +V ++ + E N P ++
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A GK E+A + + M+ S+K YT +++ + + + M E G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ + +L+ GG V+++++IL
Sbjct: 488 SNPSIETYHSLLYSFARGGLVKESEAIL 515
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 128/319 (40%), Gaps = 9/319 (2%)
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K +V M + V + FSY LI+ G++ ++++ MK++ I P T +
Sbjct: 159 KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVI 218
Query: 205 KHYVSGGRK-EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-- 261
GG E + EM + ++ T LL A G D+ +++
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P L +E +GKL ++E+ + M+ Y LL+ YA + +
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
+ QM +GC + L+ L + G + + L+ + N P ++Y ++++ +
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT-DPDAATYNILIEVF 397
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNK 438
+ G +FH M + + ++ ++ A A I M A+++ P+
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 439 ALAAQVAQVDAFRKTAVSE 457
A ++AF + A+ E
Sbjct: 458 --KAYTGVIEAFGQAALYE 474
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 111/274 (40%), Gaps = 6/274 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y+ ++ KLR L+K + ++ S Y LL ++K+A VF++M+
Sbjct: 285 YSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
G + + LL L+ + + V + L M+ N +Y ILI++ G+
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ + M E IEPD T + GG E A +L+ M +++ ++
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 240 PLYAELGKADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ + ++ + SNP ++ + + ++ + V+E+EA+ R+ +
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ + A ++ Y + M +S C
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 7/350 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A + KA EV N M G N +L Y + K A L
Sbjct: 237 VTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L++ ++ T ++ ++M G+EPD +T L + Y + G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ A+L M + ++ +L+ YA+ K DQ ++ NP +
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ K V++A F++M + YT+L+ K ++L+ +M + G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D G +
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEK-LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
K+ M VG + TL+ Y ++ A + M + V PN
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 143/335 (42%), Gaps = 17/335 (5%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +D++ K + A Y Q I E + VY +L+ + KAEE+ M
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFD---LMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T L Y R + A A+ KEM + + T
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 237 LLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
++L + ++ + +S L++ I G K N +EA +F+ + T
Sbjct: 591 IILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 650
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+L T+ + ++ + + KDL + +G + + + +E G +E+
Sbjct: 651 DLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEEL 710
Query: 354 DSILLKAQQQNKFKPMFSSYML--IMDQYAKRGDI 386
D + L ++ S ML I+ + +RGDI
Sbjct: 711 DDLFLSMEENGCSA---DSRMLNSIVRKLLQRGDI 742
>gi|356563451|ref|XP_003549976.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic-like [Glycine max]
Length = 714
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 3/265 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M V L +Y +I + N E M + PD T + + Y G+
Sbjct: 215 MIDNGVPLDNITYSTIISCAKKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLGK 274
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
E+ ++ + K T +L ++ E G D + +++ ES P L V
Sbjct: 275 VEEVISLYERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNT 334
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+EA GK K A +F+ M + + K TA++K+Y + +L ++M E+G
Sbjct: 335 LLEAMGKAGKPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENG 394
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + ++ L+ + + G VE+A+++ +Q KP SY +++ Y +GD+
Sbjct: 395 WPMDFILYNTLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDKA 454
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQA 414
K+F+ M + G F L+Q
Sbjct: 455 MKLFNEMCKSGVELNVMGFTCLIQC 479
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 9/256 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y T+++ N KA F RM + +L +Y RL KV +V+ L
Sbjct: 225 ITYSTIISCAKKCNLYDKAVHWFERMYKTSLMPDEVTYSAILDVYARLG--KVEEVISLY 282
Query: 154 EKENV---KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
E+ K ++ +L + G++ D G+ V + M+S G++P+ L +
Sbjct: 283 ERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVFQEMESVGVQPNLVVYNTLLEAMGKA 342
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM- 268
G+ A + +EM + + T ++ +Y + + +W+ + N W +D +
Sbjct: 343 GKPVFARGLFEEMIELGIVPNEKTLTAVIKIYGKARWSRDALELWQRMKENGWPMDFILY 402
Query: 269 -AAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ + VEEAE +F+ M ++ K + YTA+L +Y + K L +M
Sbjct: 403 NTLLNMCADVGLVEEAETLFRDMKQSAHCKPDSWSYTAMLNIYGSQGDVDKAMKLFNEMC 462
Query: 327 ESGCHIGPLAWDALVK 342
+SG + + + L++
Sbjct: 463 KSGVELNVMGFTCLIQ 478
>gi|22165078|gb|AAM93695.1| putative leaf protein [Oryza sativa Japonica Group]
Length = 372
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 159/393 (40%), Gaps = 67/393 (17%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCV 104
QLS W+ L D A+ L+LI K+ GL +A Y +P+ + + Y +LL
Sbjct: 29 QLSMWMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYA 88
Query: 105 AGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFS 164
N V+KAEE+F +M+ G +S+A N ++ LY +
Sbjct: 89 EANCVEKAEELFEKMRGMGM-ASSYAYNVMMRLYLQ------------------------ 123
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
GQ + M Q AM+ GI PD ST L V+ RK+K
Sbjct: 124 -------NGQVERVHSMHQ---AMEESGIVPDVSTTHTL----VAVLRKKKT-------- 161
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE-SNPWLDVCMAAIEAWGKLNKVEEA 283
L A A+ + I + E +N + M I K+N + A
Sbjct: 162 ----------------LVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDMVGA 205
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
E ++ ++ L+ Y ++ K + LV Q + G L
Sbjct: 206 EKAYEEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGG 265
Query: 344 HVEGGEVEKADSILLK--AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ + G+V KA + K A N++ P ++ ++ ++ +A++ ++ + E++ ++++
Sbjct: 266 YFKVGQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVT 325
Query: 402 VARFKQFQTLVQAYINAKTPAYGIRDRMRADNV 434
R + L++ Y+NA P + RM+ D +
Sbjct: 326 PTR-DIYHGLLKTYVNAGKPVSDLLHRMKKDGM 357
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 4/261 (1%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
+K +Y L+ + L +QV++ M G+ PD +T ++L Y GR E A
Sbjct: 295 IKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESAR 354
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAW 274
+LKEME D +K + +L + + G KA V R + P I+ +
Sbjct: 355 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTF 414
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK N + A F +M + + + L+ + + +L ++M ES C G
Sbjct: 415 GKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGT 474
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
++ ++ L E E +++L + ++Q P +Y ++D Y + G
Sbjct: 475 TTYNIMINLLGEQEHWEGVEAMLSEMKEQG-LVPNIITYTTLVDVYGRSGRYKEAIDCIE 533
Query: 395 RMRQVGYVARFKQFQTLVQAY 415
M+ G + LV AY
Sbjct: 534 AMKADGLKPSPTMYHALVNAY 554
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 6/256 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L ++ L+ AE + ++ + E Y L+ + A +
Sbjct: 300 RAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKE 359
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G +S+ +++L ++ R D +K VL M+ V+ + Y ++ID G+ N
Sbjct: 360 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNC 419
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L M+ EGIEPD T L + GGR ++A + +EM N T +
Sbjct: 420 LGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNI 479
Query: 238 LLPLYAELGKADQV-ARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ L E + V A + ++ E P + ++ +G+ + +EA + M
Sbjct: 480 MINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADG 539
Query: 295 KKLSTKHYTALLKVYA 310
K S Y AL+ YA
Sbjct: 540 LKPSPTMYHALVNAYA 555
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSY 165
N + A + FN+M+++G N L+ + + + + A++ M + N +Y
Sbjct: 418 NCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTY 477
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 478 NIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKA 537
Query: 226 DNLKEHRWTCRLLLPLYAELG 246
D LK L+ YA+ G
Sbjct: 538 DGLKPSPTMYHALVNAYAQRG 558
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGK 319
P + A I A G +V EAEA+F + K T+ Y ALLK Y L +
Sbjct: 260 TPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAE 319
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML--IM 377
++ +M++ G + LV + G E A ILLK + + KP SSY+ I+
Sbjct: 320 QVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA-RILLKEMEADGVKP--SSYVFSRIL 376
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVF 435
+ RGD + M+ G + ++ + N A ++MR + +
Sbjct: 377 AGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIE 436
Query: 436 PN 437
P+
Sbjct: 437 PD 438
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 40/272 (14%)
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE-MEGDNLKEHRWTCRLLLPL 241
+++ + ++ G+ P S+ L + GR +AEA+ E +K LL
Sbjct: 249 ELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKG 308
Query: 242 Y---AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
Y A L A+QV C P ++A+ + + E A + K M K S
Sbjct: 309 YVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPS 368
Query: 299 T----------------------------------KH-YTALLKVYADHKMLSKGKDLVK 323
+ +H Y ++ + + L D
Sbjct: 369 SYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFN 428
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
+M E G + W+ L+ H +GG ++A + + ++ N P ++Y ++++ ++
Sbjct: 429 KMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN-CPPGTTTYNIMINLLGEQ 487
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
E + M++ G V + TLV Y
Sbjct: 488 EHWEGVEAMLSEMKEQGLVPNIITYTTLVDVY 519
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 143/327 (43%), Gaps = 11/327 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y +L N + A +F+ M+ + + + L+ + K+ + D L
Sbjct: 158 YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSF---GKEGMFDSALSWLQ 214
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME++ V Y LI++ + D + + +K GI PD + Y
Sbjct: 215 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 274
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CM 268
+A ++KEM + + + LL +Y E K + ++ ++ E N LD+ C
Sbjct: 275 LFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCN 334
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+L+ V+EA+ +F + K + + Y +L+VY + ++ + L + M
Sbjct: 335 IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 394
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ ++ ++K++ + E EKA + L++ Q +P +Y I+ + K G +
Sbjct: 395 DIEQNVVTYNTMIKIYGKTMEHEKATN-LVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
+F ++R G +QT++ AY
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAY 480
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 193/454 (42%), Gaps = 68/454 (14%)
Query: 3 APDISIHSTL-TKYAEEG-------------NDLSRAEIALAMANL--RTRRM--YGKAL 44
APD +STL T + +EG D ++ L +NL +RR+ Y KA+
Sbjct: 187 APDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVL-YSNLIELSRRLCDYSKAI 245
Query: 45 QLSEWLE-TNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
+ L+ + D + Y S +++ K + ++A I+++ E+ V Y TLL+
Sbjct: 246 SIFSRLKRSGITPDLVA--YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL---------- 151
V + +A VF MK+ + CN ++ +Y +LD K AD L
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 152 --------------------------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
LM++++++ +Y +I I G++ + +V
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M+S GIEP++ T + + + G+ ++A + +++ ++ + + ++ Y +
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483
Query: 246 GKADQVARI---WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
G R+ KL ++ P AI K + EEA VF++ ++ + +
Sbjct: 484 GLMGHAKRLLHELKLPDNIP----RETAITILAKAGRTEEATWVFRQAFESGEVKDISVF 539
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
++ +Y+ ++ ++ ++M +G ++ + + E EKAD++ + Q+
Sbjct: 540 GCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQE 599
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ P + ++ Y+ + D E +F R+
Sbjct: 600 EGCVFPD-EVHFQMLSLYSSKKDFEMVESLFQRL 632
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 133/325 (40%), Gaps = 6/325 (1%)
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKEN 157
+L C +G V AE V M ++G + L+ + +L + A L MEK+
Sbjct: 52 ILLLCKSGK-VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR 110
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
+ +Y +I + + D+V M S G+EPD T L Y G EKA
Sbjct: 111 IVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAF 170
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAW 274
++ +M L + T L +LG+ D + ++C L++C + +
Sbjct: 171 SLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGL 230
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K + +A + + M T +T L+ Y + K +L+++M + G
Sbjct: 231 CKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTV 290
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+ ++ L+ G +E + LL + P ++Y +M QY R ++ T +I+
Sbjct: 291 ITFNVLMNGFCMSGMLEDGER-LLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYK 349
Query: 395 RMRQVGYVARFKQFQTLVQAYINAK 419
M G + + L++ + A+
Sbjct: 350 GMCARGVMPDSNTYNILIKGHCKAR 374
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 8/272 (2%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
MK G PD + + + Y GG +K +++EM+ LK + +T ++ L + GK
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 248 ADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
D R+ + + P V I+ + KL ++ A +F M K YTA
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
++ + + + +M G + + L+ + + GE+EKA S L Q+
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFS-LHNQMVQS 179
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PA 422
P +Y + D K G + + ++ H M G + +LV + A
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239
Query: 423 YGIRDRMRADNVFPNKALAAQVAQVDAFRKTA 454
+ + M ++P+ + +DA+ KT
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTL--MDAYCKTG 269
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 4/255 (1%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
SY +I+ +L + ++++ M+ +G++P+ T + G+ + AE +L+EM
Sbjct: 12 SYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREM 71
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKV 280
+ L+ + +LG +++ E P A I + K+
Sbjct: 72 INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
EA+ VF +M + YT L+ Y + K L QM +SG + + AL
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ G+V+ A+ LL + +Y +++ K G+I K+ M G
Sbjct: 192 ADGLCKLGQVDTANE-LLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250
Query: 401 YVARFKQFQTLVQAY 415
F TL+ AY
Sbjct: 251 MYPDTITFTTLMDAY 265
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 126/321 (39%), Gaps = 34/321 (10%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
EV Y TL+ ++KA + N+M G L +L + A+ LL
Sbjct: 150 EVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLH 209
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + ++L +Y L++ +S ++ +++E M+ G+ PD+ T L Y G
Sbjct: 210 EMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTG 269
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
KA +L+EM L+ T +L+ + CM+ +
Sbjct: 270 EMVKAHELLREMLDRGLQPTVITFNVLMNGF------------------------CMSGM 305
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+E+ E + M + +T Y +L+K Y + ++ K M G
Sbjct: 306 --------LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVM 357
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
++ L+K H + +++A L K + F SSY I+ + K+ I +
Sbjct: 358 PDSNTYNILIKGHCKARNMKEA-WFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARE 416
Query: 392 IFHRMRQVGYVARFKQFQTLV 412
+F MR+ G A + + V
Sbjct: 417 LFEEMRREGMAADAEIYNLFV 437
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 144/363 (39%), Gaps = 12/363 (3%)
Query: 62 DYASC---LDLIAKLRGLQKAESYIQKIPESFRGE---VVYRTLLANCVAGNNVKKAEEV 115
D +C L+ I + KA ++ +P SF E V Y +L +E+
Sbjct: 191 DVGNCNLVLNAICDQGSVDKALHLLRDLP-SFGCEPDVVSYNAVLKGLCMAKRWGCVQEL 249
Query: 116 FNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQ 174
M P N L+ L + ++V +VL M + Y +ID +
Sbjct: 250 MEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICK 309
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
L +++ M S G++P+ L K S R E+ E +L EM + T
Sbjct: 310 EGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVT 369
Query: 235 CRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
+L+ + + G D+V + + + P + I + K ++EA + K M+
Sbjct: 370 FNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT 429
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
K +T YT +LK + +DL+ QM + GC + P+ ++ L+ + G VE
Sbjct: 430 ACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVE 489
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+A LLK N P SY ++D K G ++ + M G + ++
Sbjct: 490 QAIE-LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSI 548
Query: 412 VQA 414
A
Sbjct: 549 ASA 551
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/359 (19%), Positives = 144/359 (40%), Gaps = 18/359 (5%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNR 118
R YA+ +D I K L+ A + ++P + VV Y TLL + ++ EE+
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 119 MKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M DK P+ N L+ + + +V ++L M +Y +I+ +
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGL 417
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ ++++M + G +P++ + I+ K S R AE ++ +M + T
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNT 477
Query: 238 LLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + G +Q + K + +P L I+ GK K +EA + M
Sbjct: 478 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 537
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+T Y+++ + ++K + + ++ + ++A++ + GE E+A
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 597
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF-----------HRMRQVGYV 402
L + P S+Y +++ A G + +++ H M+ G V
Sbjct: 598 E-FLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGIV 655
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 143/357 (40%), Gaps = 28/357 (7%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKK 145
P+ F Y L+ + KA E+ + M D+G + N ++ L K ++
Sbjct: 8 PDVF----TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 63
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
+L +M + N + + +Y LI + ++ +V+ S G PD T +ILA
Sbjct: 64 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILAD 123
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES----- 260
GR ++A ++KEM G+ + T L+ L KA + + ++L E+
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLID---GLCKASKTEKAYELLETLVSSG 180
Query: 261 -NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
P + ++ K ++++A + + M K S YTAL++ + +
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
+ K+M C LA+ +LV + + ++A ++ + P Y +MD
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV----DGIRGTPYIDVYNALMDG 296
Query: 380 YAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFP 436
Y K G + +F M G V K + ++ G+ + D FP
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD----------GLCKHGKVDEAFP 343
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/356 (18%), Positives = 143/356 (40%), Gaps = 6/356 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK-IPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y + + + K + + +A++ + + + F +VV ++LA+ C G + +A E+ M
Sbjct: 83 YNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGR-IDEAFELVKEM 141
Query: 120 KDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
G N L+ L K +K ++L + +Y I++D + L
Sbjct: 142 SGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRL 201
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
++VE M G P T L + GR ++A + KEM + L
Sbjct: 202 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 261
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ Y + + + ++ P++DV A ++ + K +++E VF+ M+ +
Sbjct: 262 VNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 321
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
K Y ++ H + + ++ M +GC ++++ ++ + + ++A +L
Sbjct: 322 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 381
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ Q P +Y +M Q+ K I M + G + TL+
Sbjct: 382 QMIQAG-IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 436
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 107/272 (39%), Gaps = 10/272 (3%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V F+Y ILID +++ +++ M G+ PD+ T + G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE----SNPWLDVCM 268
E+A ++L M N R +C L + L K V R L + S DV
Sbjct: 61 FERAHSLLAVMAERNC---RPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVT 117
Query: 269 AAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+I A G K +++EA + K MS + Y L+ K +L++ +
Sbjct: 118 YSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV 177
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
SG + + +V + G ++KA +++ + P +Y +M+ + G +
Sbjct: 178 SSGFVPDVVTYTIIVDGLCKEGRLDKALK-MVEGMLKRGCTPSVITYTALMEGLCRTGRV 236
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
IF M A + +LV Y +
Sbjct: 237 DEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 268
>gi|414885834|tpg|DAA61848.1| TPA: leaf protein [Zea mays]
Length = 637
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 158/376 (42%), Gaps = 15/376 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL----ILYKRLDKKKVADV 149
+ + L+ V + +A F +MK G T+ N L+ I+ K + ++V D+
Sbjct: 138 IFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDM 197
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
+ + LT +Y IL+ +L VV M++ G EPD T +A Y +
Sbjct: 198 MGVEGSVRPNLT--TYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYAN 255
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLDV 266
+AE ++ E++ ++ T +++ Y G+ ++ R K S P + +
Sbjct: 256 NDETWRAEELIVEIQ-TRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVI 314
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
++ + N + + M K K Y+ L ++ ++K + +M
Sbjct: 315 FNTLLKGFLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMI 374
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
E+G P + L K V + EKA+ +LL+ P ++ ++ + D+
Sbjct: 375 EAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSHLG-LCPNVVTFTTVISGWCSVADM 433
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQV 444
S +++ +M + G + F+TL+ Y K P A + MR V P ++ +
Sbjct: 434 ESAMRVYDKMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLI 493
Query: 445 AQVDAFRKTAVSELLD 460
A DA++ ++E ++
Sbjct: 494 A--DAWKAVGLTENIN 507
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 34/254 (13%)
Query: 78 KAESYIQKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI 136
+AE I +I R E + ++ +++A +MKD G N LL
Sbjct: 261 RAEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLK 320
Query: 137 LY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
+ D V +L LMEK +K +Y ++ + V + M GIEP
Sbjct: 321 GFLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEP 380
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
D +ILAK +V + EKAE +L +M + LG
Sbjct: 381 DPQVYSILAKGFVRAQQPEKAEDLLLQM-------------------SHLG--------- 412
Query: 256 KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
LC P + I W + +E A V+ +M K+ + + + L+ Y++ K
Sbjct: 413 -LC---PNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFETLIWGYSEQKQP 468
Query: 316 SKGKDLVKQMAESG 329
K +++++ M E+G
Sbjct: 469 WKAEEVLQMMRETG 482
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K +A +VFK + K S YT LL + +M L+ ++ +G + ++
Sbjct: 82 KPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFN 141
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
AL+ VE + +A + K + + P S++ ++ Y G ++++F M
Sbjct: 142 ALINAFVEAKRMGEAINTFWK-MKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGV 200
Query: 399 VGYV-ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
G V + LV+A+ + + A+G+ +M+A P+
Sbjct: 201 EGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPD 242
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 172/438 (39%), Gaps = 49/438 (11%)
Query: 12 LTKYAEEGND-LSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLI 70
L +Y +G+ L R + + + + + ++ EWL +F E D+ +
Sbjct: 33 LRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAY 92
Query: 71 AKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTS 128
KL AE + + + S + Y L+ + G AE +F RM+ G ++
Sbjct: 93 GKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSA 152
Query: 129 FACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM 188
+L + DK K E E V ++ L+D
Sbjct: 153 ITYQIILKTFVEGDKFK--------EAEEV------FETLLD-----------------E 181
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL---YAEL 245
K ++PD ++ Y G EKA + M G + + T L+ Y E+
Sbjct: 182 KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV 241
Query: 246 GKA-DQVARIWKLCESNPWLDVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
K DQ+ R S+ DV A I+A+G+ + EEA +VF+ M + + K Y
Sbjct: 242 SKIYDQMQR------SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 295
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
LL +A M+ + K + K M ++ ++ +V ++E A+ K +
Sbjct: 296 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK-FFKRIK 354
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT-- 420
+ F+P +Y ++ YAK D+ +++ +MR G A T++ A K
Sbjct: 355 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFG 414
Query: 421 PAYGIRDRMRADNVFPNK 438
A G M + V P++
Sbjct: 415 SALGWYKEMESCGVPPDQ 432
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 141/319 (44%), Gaps = 11/319 (3%)
Query: 134 LLILYKRLDKKKVAD-VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ Y +L A+ VL ++ K SY L++ G+ + + M+S G
Sbjct: 88 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 147
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEM---EGDNLKEHRWTCRLLLPLYAELGKAD 249
EP + T I+ K +V G + ++AE + + + + LK + +++ +Y + G +
Sbjct: 148 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 207
Query: 250 QVARIWK--LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
+ +++ + + P V ++ ++ K E ++ +M ++ + Y L+K
Sbjct: 208 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYK--EVSKIYDQMQRSDIQPDVVSYALLIK 265
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
Y + + + ++M ++G A++ L+ G VE+A ++ K+ ++++
Sbjct: 266 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVF-KSMRRDRIF 324
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGI 425
P SY ++ Y D+ EK F R++ G+ + TL++ Y A +
Sbjct: 325 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 384
Query: 426 RDRMRADNVFPNKALAAQV 444
++MR + N+ + +
Sbjct: 385 YEKMRLSGIKANQTILTTI 403
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 5/262 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
+Y ++ N +KA +VF+ M KG P ++ N L+ K+V+ + M+
Sbjct: 192 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF--ETSYKEVSKIYDQMQ 249
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ +++ SY +LI G++ V E M G+ P IL + G E
Sbjct: 250 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 309
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAI 271
+A+ + K M D + W+ +L Y + + +K + + P + I
Sbjct: 310 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 369
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ + K N VE+ V+++M + K + T ++ K K+M G
Sbjct: 370 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 429
Query: 332 IGPLAWDALVKLHVEGGEVEKA 353
A + L+ L E+E+A
Sbjct: 430 PDQKAKNVLLSLASTQDELEEA 451
>gi|195613918|gb|ACG28789.1| leaf protein [Zea mays]
Length = 637
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 158/376 (42%), Gaps = 15/376 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL----ILYKRLDKKKVADV 149
+ + L+ V + +A F +MK G T+ N L+ I+ K + ++V D+
Sbjct: 138 IFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDM 197
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
+ + LT +Y IL+ +L VV M++ G EPD T +A Y +
Sbjct: 198 MGVEGSVRPNLT--TYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYAN 255
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLDV 266
+AE ++ E++ ++ T +++ Y G+ ++ R K S P + +
Sbjct: 256 NDETWRAEELIVEIQ-TRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVI 314
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
++ + N + + M K K Y+ L ++ ++K + +M
Sbjct: 315 FNTLLKGFLDANDMAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMI 374
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
E+G P + L K V + EKA+ +LL+ P ++ ++ + D+
Sbjct: 375 EAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSHLG-LCPNVVTFTTVISGWCSVADM 433
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQV 444
S +++ +M + G + F+TL+ Y K P A + MR V P ++ +
Sbjct: 434 ESAMRVYDKMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLI 493
Query: 445 AQVDAFRKTAVSELLD 460
A DA++ ++E ++
Sbjct: 494 A--DAWKAVGLTENIN 507
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 101/254 (39%), Gaps = 34/254 (13%)
Query: 78 KAESYIQKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI 136
+AE I +I R E + ++ +++A +MKD G N LL
Sbjct: 261 RAEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLK 320
Query: 137 LY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
+ D V +L LM+K +K +Y ++ + V + M GIEP
Sbjct: 321 GFLDANDMAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEP 380
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
D +ILAK +V + EKAE +L +M + LG
Sbjct: 381 DPQVYSILAKGFVRAQQPEKAEDLLLQM-------------------SHLG--------- 412
Query: 256 KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
LC P + I W + +E A V+ +M K+ + + + L+ Y++ K
Sbjct: 413 -LC---PNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFETLIWGYSEQKQP 468
Query: 316 SKGKDLVKQMAESG 329
K +++++ M E+G
Sbjct: 469 WKAEEVLQMMRETG 482
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K +A +VFK + K S YT LL + +M L+ ++ +G + ++
Sbjct: 82 KPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFN 141
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
AL+ VE + +A + K + + P S++ ++ Y G ++++F M
Sbjct: 142 ALINAFVEAKRMGEAINTFWK-MKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGV 200
Query: 399 VGYV-ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
G V + LV+A+ + + A+G+ +M+A P+
Sbjct: 201 EGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPD 242
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 172/438 (39%), Gaps = 49/438 (11%)
Query: 12 LTKYAEEGND-LSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLI 70
L +Y +G+ L R + + + + + ++ EWL +F E D+ +
Sbjct: 90 LRQYKTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAY 149
Query: 71 AKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTS 128
KL AE + + + S + Y L+ + G AE +F RM+ G ++
Sbjct: 150 GKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSA 209
Query: 129 FACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM 188
+L + DK K E E V ++ L+D
Sbjct: 210 ITYQIILKTFVEGDKFK--------EAEEV------FETLLD-----------------E 238
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL---YAEL 245
K ++PD ++ Y G EKA + M G + + T L+ Y E+
Sbjct: 239 KKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV 298
Query: 246 GKA-DQVARIWKLCESNPWLDVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
K DQ+ R S+ DV A I+A+G+ + EEA +VF+ M + + K Y
Sbjct: 299 SKIYDQMQR------SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
LL +A M+ + K + K M ++ ++ +V ++E A+ K +
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK-FFKRIK 411
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT-- 420
+ F+P +Y ++ YAK D+ +++ +MR G A T++ A K
Sbjct: 412 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFG 471
Query: 421 PAYGIRDRMRADNVFPNK 438
A G M + V P++
Sbjct: 472 SALGWYKEMESCGVPPDQ 489
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 106/262 (40%), Gaps = 5/262 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
+Y ++ N +KA +VF+ M KG P ++ N L+ K+V+ + M+
Sbjct: 249 MYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF--ETSYKEVSKIYDQMQ 306
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ +++ SY +LI G++ V E M G+ P IL + G E
Sbjct: 307 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 366
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAI 271
+A+ + K M D + W+ +L Y + + +K + + P + I
Sbjct: 367 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 426
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ + K N VE+ V+++M + K + T ++ K K+M G
Sbjct: 427 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 486
Query: 332 IGPLAWDALVKLHVEGGEVEKA 353
A + L+ L E+E+A
Sbjct: 487 PDQKAKNVLLSLASTQDELEEA 508
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 131/326 (40%), Gaps = 9/326 (2%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM-- 153
Y +L+ V + AE + MK K + + N LL Y R K + V LM
Sbjct: 222 YSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTR--KSLLEQVEKLMQD 279
Query: 154 -EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
E +KL+ FSY +LID ++ L MK E + ++ + L Y + +
Sbjct: 280 AEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQ 339
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
+ +LK+M N+K +++ +L+ Y + G+ Q R + + P + +
Sbjct: 340 WDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNS 399
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
IEA + + EA + K+M + S Y +L H + L+ +M G
Sbjct: 400 LIEAHCRAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKG 459
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + LV + +A S LK + +P S Y + + YAKRG
Sbjct: 460 LDPNVVTYTTLVDSYGTSKRYREA-SEYLKQMKSQGLQPSTSVYCALANSYAKRGLCEQA 518
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
++F M + G L+ A+
Sbjct: 519 MEVFKSMEKDGVELNLSMLNLLINAF 544
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 7/273 (2%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKI 167
+ +A F +M +GF N L+ + R + D+L M++ + +Y I
Sbjct: 375 LPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPSLHTYNI 434
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+++ G N M +++ M+ +G++P+ T L Y + R +A LK+M+
Sbjct: 435 ILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYREASEYLKQMKSQG 494
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEEAE 284
L+ L YA+ G +Q ++K E + L + I A+G K EA
Sbjct: 495 LQPSTSVYCALANSYAKRGLCEQAMEVFKSMEKDGVELNLSMLNLLINAFGVAGKYVEAF 554
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL---V 341
+VF + + YT L+K + L + D+ +QM +GC +A D L
Sbjct: 555 SVFDYILEVGMSPDVVTYTTLMKALIKAEQLDQVPDVYEQMVRAGCTPDDMAKDMLRSAQ 614
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
+ G ++ K++ L K + ++++ S++
Sbjct: 615 RFKQRGPKITKSEFPLAKKKLESRYSDWVDSHV 647
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 147/371 (39%), Gaps = 47/371 (12%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY----KRLDKKKVA 147
G + Y ++ C + ++ A E+ N+M+ GF + N L+ KR+ ++
Sbjct: 112 GPMAYNAIVGTCAREDRLETALELMNQMRGSGFQPDNV--NYTLVFQACAKKRVGVDVIS 169
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
V +E+E +++ Y +I+ ++ D Q + M++ + PD + + L +
Sbjct: 170 RVCANIEQEGLEMDTKLYNDVINAYCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETL 229
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC 267
V R + AEA EM+ + K + T LL Y +QV ++ + E + L +
Sbjct: 230 VVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAE-DAGLKLS 288
Query: 268 MAA----IEAWGKLNKVEEAEAVFKRM---------------------SKTWK------- 295
+ I+A+ + ++++A+A F M ++ W
Sbjct: 289 TFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLK 348
Query: 296 -------KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
K + + L+ Y L + QM + G + W++L++ H G
Sbjct: 349 DMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAG 408
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
+ +A LLK Q+ + P +Y +I++ + MR G +
Sbjct: 409 LITEALD-LLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTY 467
Query: 409 QTLVQAYINAK 419
TLV +Y +K
Sbjct: 468 TTLVDSYGTSK 478
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 57/323 (17%), Positives = 126/323 (39%), Gaps = 53/323 (16%)
Query: 143 KKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
+ +V + +LL +++ V +Y ++ + + L +++ M+ G +PD+
Sbjct: 91 ESRVEEAMLLFDQLKQLGVSPGPMAYNAIVGTCAREDRLETALELMNQMRGSGFQPDNVN 150
Query: 200 QAIL----AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT------CRLLLPLYAELGKAD 249
++ AK V + A + E EG + + CR P KA
Sbjct: 151 YTLVFQACAKKRVGVDVISRVCANI-EQEGLEMDTKLYNDVINAYCRAGDP-----DKAF 204
Query: 250 QVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
Q + + C+ P + + IE + ++++AEA + M K++ + ALL Y
Sbjct: 205 QYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAY 264
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI------------- 356
+L + + L++ ++G + ++ L+ + G +++A +
Sbjct: 265 TRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANA 324
Query: 357 ---------------------LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
LLK + KP + +++D Y K G + + F +
Sbjct: 325 FIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQ 384
Query: 396 MRQVGYVARFKQFQTLVQAYINA 418
M + G+ + +L++A+ A
Sbjct: 385 MDKEGFKPDVVTWNSLIEAHCRA 407
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/424 (20%), Positives = 170/424 (40%), Gaps = 47/424 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVVYRTLLANCVAGNNVK-KAEEVFNRMK 120
Y+S + K +++AE+ + + E + +L + A +++ + VF+++K
Sbjct: 231 YSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLK 290
Query: 121 ---DKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D G T+ L+ LY +L K K + M+ + + L + +Y +L+D Q
Sbjct: 291 ARIDTGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLG 350
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME------------ 224
D V E M GIEPD T IL K + + +A +L M+
Sbjct: 351 DFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYI 410
Query: 225 ---------GD--------------NLKEHRWTCRLLLPLYAELGKADQVARI---WKLC 258
GD + + T +++ +LG+ D+ A + +L
Sbjct: 411 TIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELA 470
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P ++ + + ++ A KR+++ +K Y +LLK +
Sbjct: 471 GVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNA 530
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ ++MA +G + ++ L+ + G++ +A I+ K +Q+ F P SY ++
Sbjct: 531 IAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEG-FTPDIHSYTSFVN 589
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFP 436
K GD+ + M+Q + + L+ + + P A D M+A + P
Sbjct: 590 ACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIP 649
Query: 437 NKAL 440
+K L
Sbjct: 650 DKPL 653
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 135/308 (43%), Gaps = 19/308 (6%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI--LAKHYVSGGRKEKA 216
K + Y +LI G+ D G E M++ GI DSS A L + Y+ + A
Sbjct: 120 KAVERDYALLIHYYGKRGDKRGARVTFEKMRAAGI--DSSVHAYNNLIRAYIMAQNLQGA 177
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEA 273
+ ++EME + + + T ++ Y G + + ++ S W + + + I A
Sbjct: 178 VSCVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHA 237
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL---VKQMAESGC 330
+ K +E AEA+ M + + + Y L+ YA + ++ ++ +K ++G
Sbjct: 238 YCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGL 297
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ + L+ L+ + G++ KA +KAQ + ++Y +++D Y + GD +
Sbjct: 298 SPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNR---NTYSMLVDGYVQLGDFAN 354
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQ 446
+F M + G + + L++A+ ++ T A + RM+ P + +
Sbjct: 355 AFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPT--IQTYITI 412
Query: 447 VDAFRKTA 454
+D F KT
Sbjct: 413 IDGFMKTG 420
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 142/357 (39%), Gaps = 28/357 (7%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKK 145
P+ F Y L+ + KA E+ + M D+G + N ++ L K ++
Sbjct: 259 PDVF----TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 314
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
+L +M + N + + +Y LI + ++ +V+ S G PD T +ILA
Sbjct: 315 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES----- 260
GR ++A ++KEM G + T L+ L KA + + ++L ES
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLID---GLCKASKTEKAYELLESLVSSG 431
Query: 261 -NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
P + ++ K ++++A + + M K S YTAL++ + +
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
+ K+M C LA+ +LV + + ++A ++ + P Y +MD
Sbjct: 492 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV----DGIRGTPYIDVYNALMDG 547
Query: 380 YAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFP 436
Y K G + +F M G V K + ++ G+ + D FP
Sbjct: 548 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD----------GLCKHGKVDEAFP 594
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 143/356 (40%), Gaps = 6/356 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK-IPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y + + + K + + +A+ + + + F +VV ++LA+ C G + +A E+ M
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGR-IDEAFELVKEM 392
Query: 120 KDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
KG N L+ L K +K ++L + +Y I++D + L
Sbjct: 393 SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRL 452
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
++VE M G P T L + GR ++A + KEM + L
Sbjct: 453 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 512
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ Y + + + ++ P++DV A ++ + K +++E VF+ M+ +
Sbjct: 513 VNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPN 572
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
K Y ++ H + + ++ M +GC ++++ ++ + + ++A +L
Sbjct: 573 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 632
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ Q P +Y +M Q+ K I M + G + TL+
Sbjct: 633 QMIQAG-IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 687
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 134/338 (39%), Gaps = 18/338 (5%)
Query: 90 FRGEVVYRTLL--ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKV 146
F+ EV T+L A C G +K A E+F + + A N ++ + R D
Sbjct: 191 FKPEVSVYTILTRAFCKTGR-LKDALEIFRNIPSP----DAIAYNAIIHGHCRKNDCDGA 245
Query: 147 ADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
+ L M + V F+Y ILID +++ +++ M G+ PD+ T +
Sbjct: 246 LEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG 305
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR----IWKLCESNP 262
G+ E+A ++L M N R +C L + L K V R + + S
Sbjct: 306 LCKAGKFERAHSLLAVMAERNC---RPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362
Query: 263 WLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
DV +I A G K +++EA + K MS + Y L+ K +
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L++ + SG + + +V + G ++KA +++ + P +Y +M+
Sbjct: 423 LLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK-MVEGMLKRGCTPSVITYTALMEGL 481
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ G + IF M A + +LV Y +
Sbjct: 482 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKS 519
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 114/290 (39%), Gaps = 33/290 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK-VADVLLL 152
V Y TL++ N + A E+ + M G V+ AC + RL K+ + LLL
Sbjct: 679 VTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVS--ACTTYNTIIDRLCKEGCLKQALLL 736
Query: 153 MEK---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M+ V+ +Y I ID + L ++ M + E +T I
Sbjct: 737 MDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVII---GLCK 793
Query: 210 GGRKEKAEAMLKEM---EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC---ESNPW 263
+ ++A + +EM +G + H + LL+ + + + D+ + L +P
Sbjct: 794 AEQLDRASKLAREMVAVKGLCITSHTFN--LLIDAFTKTKRLDEALTLLGLMVQRGCSPS 851
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
+ I KL+KV++A +F M+ S+ YT L+ + +++
Sbjct: 852 VITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLE 911
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSY 373
+MA S C I L W + + +Q Q F P +SS+
Sbjct: 912 EMASSDCEIDDLKW----------------EDVAPHSQFQTTFGPCYSSF 945
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 98/263 (37%), Gaps = 15/263 (5%)
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
G S+ + M E M G PDS T ++ K + +KA ML + + K
Sbjct: 139 GSSDRIPAM---FERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEV 195
Query: 233 WTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
+L + + G+ I++ S P A I + N + A K M++
Sbjct: 196 SVYTILTRAFCKTGRLKDALEIFRNIPS-PDAIAYNAIIHGHCRKNDCDGALEFLKEMNE 254
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
Y L+ K +++ +M + G + +++++ + G+ E+
Sbjct: 255 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 314
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
A S+L ++N +P +Y ++ K+ ++ + + G+V + L
Sbjct: 315 AHSLLAVMAERN-CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSIL- 372
Query: 413 QAYINAKTPAYGIRDRMRADNVF 435
A G+ R R D F
Sbjct: 373 ---------ADGLCKRGRIDEAF 386
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 106/252 (42%), Gaps = 9/252 (3%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +ID+ G+ + QV++ MK+ +E T +IL + YV G +A ME
Sbjct: 145 YNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRME 204
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEE 282
N K + +L+ + +A + + + P + V + W + + E
Sbjct: 205 DYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPE 264
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE VF M + YT ++ +++ D+ +M + GC + ++ L++
Sbjct: 265 AERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLR 324
Query: 343 LHVEGGEVEKADSILLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
+HV+ G EK +L+ Q K P +Y +++ + K G++ K+ + M +
Sbjct: 325 VHVKAGRTEK----VLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKK 380
Query: 400 GYVARFKQFQTL 411
G F L
Sbjct: 381 GCSPNASTFNGL 392
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 131/349 (37%), Gaps = 44/349 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRMK 120
++ + ++ + R +A+S+ + + F +V+ T L C AGN + +AE VF MK
Sbjct: 215 FSILISILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGN-IPEAERVFTEMK 273
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G C NV ++Y I+ID + +T
Sbjct: 274 VAG-------C-----------------------MPNV----YTYTIVIDALCRCGQITR 299
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
V M G EP+S T L + +V GR EK + +M+ T L+
Sbjct: 300 AHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIE 359
Query: 241 LYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ + G D+ ++ K C N + KL V A ++ +M +
Sbjct: 360 SHCKDGNLDEALKVLNSMVKKGCSPN--ASTFNGLFGSIAKLRDVNGAHRLYAKMKELKC 417
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K +T Y L++++ D K L K+M E + L+ ++ G A
Sbjct: 418 KANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYK 477
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
+ ++ KP Y ++ Q K G + E++ M G+ R
Sbjct: 478 FFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGFATR 526
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 148/361 (40%), Gaps = 11/361 (3%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
+P+ F +++ L N + K +F + G + + C+ LL + K
Sbjct: 165 VPDGFTYSILFDGLSRN----GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVS 220
Query: 146 VAD-VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+A+ VL + + T+ Y LI+ Q+ +L G MKS I+PD T L
Sbjct: 221 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 280
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--- 261
R A+ +L EM+ + + T L+ Y G+ ++ + + N
Sbjct: 281 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 340
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P + + + A+ K K+ EA A+ M + + Y A++ Y +H + L
Sbjct: 341 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 400
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
V++M +G + ++ L+K ++ +A+ I + + ++ P SY ++
Sbjct: 401 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI-INSLSNHRLIPDAVSYNTLISACC 459
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKA 439
RG+I + RM + G + + + L+ A + +M +NV P+ A
Sbjct: 460 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 519
Query: 440 L 440
+
Sbjct: 520 I 520
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 5/309 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V+Y TL+ ++ A F +MK + N L+ L K D+L+
Sbjct: 239 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 298
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ V T ++ LID G++ L V+ M+ G++P+ + + + G+
Sbjct: 299 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
+A A+L +M ++ + ++ Y E G DQ + + +SN P +
Sbjct: 359 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 418
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +++ EAE + +S Y L+ + K DL ++M + G
Sbjct: 419 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 478
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ L+ G + + + L + QN P + + ++++ Y+K G+
Sbjct: 479 IKSTVRTYHQLISGLGGAGRLNEME-YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA 537
Query: 390 EKIFHRMRQ 398
E + M Q
Sbjct: 538 EDLRKEMLQ 546
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 33/307 (10%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKI 167
VK+A E F +M+ GF + N+LL L K + KK +V M+ K SY I
Sbjct: 206 VKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTI 265
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
L++ GQ +L +++V M+ EG EPD T IL + + ++A + EME N
Sbjct: 266 LLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKN 325
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
+K P V I G +++EA F
Sbjct: 326 IK--------------------------------PSPHVFCTLINGLGSEKRLKEALEFF 353
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+++ + Y A++ Y ++ +V +M +SG +D ++ ++G
Sbjct: 354 EQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKG 413
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+ ++A S+ + ++ +P S+Y +++ + + +I+ M+ G +
Sbjct: 414 RKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHL 473
Query: 408 FQTLVQA 414
F TL+ +
Sbjct: 474 FSTLINS 480
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKK--LSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
IEA GK +++ ++ +S +K LS + + + + YA + + + + ++M +
Sbjct: 163 IEALGK---IKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKF 219
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G +G ++ L+ + V+KA + K + +FKP SY ++++ + + ++
Sbjct: 220 GFQMGVSDFNRLLDTLCKSRNVKKAQEVFDK-MKHGRFKPDIKSYTILLEGWGQDQNLLK 278
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
+++ MR G+ F L+ A+ A+ IR M A N+ P+
Sbjct: 279 LNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPS 329
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 159/385 (41%), Gaps = 14/385 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y C+D K + A + +I +V Y +++ GN + +A E+F +M+
Sbjct: 271 YNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQME 330
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKL-TQFSYKILIDIKGQSNDLT 179
++A N +++ Y K A LL +K + + +Y ++ G+ L
Sbjct: 331 QNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLG 390
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ E MK + P+ ST +L G E A + M+ L + T +++
Sbjct: 391 EALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMI 449
Query: 240 PLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+ K D+ I+ K+C + + C + I+ GK +V++A ++++M +
Sbjct: 450 DRLCKAKKLDEACSIFEGMNHKICSPDE-VTFC-SLIDGLGKQGRVDDAYRLYEQMLDSD 507
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K + YT+L+K + G + K+M GC +A + + GE K
Sbjct: 508 KIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGR 567
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ L + + F P SY +++ K G T ++F+ M++ G V + T +
Sbjct: 568 A-LFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDG 626
Query: 415 YINAK--TPAYGIRDRMRADNVFPN 437
+ + AY + + M+ P
Sbjct: 627 FCKSGKVNKAYQLLEEMKTKGRQPT 651
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 135/330 (40%), Gaps = 10/330 (3%)
Query: 96 YRTLLANCVAGNNVK--KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
Y +LL V NVK E++ M GF ++ C +L++ + +K ++ D++
Sbjct: 131 YDSLLL--VMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQC 188
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K + +Y LI + M + M+ G E + + + GR
Sbjct: 189 MRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGR 248
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL--DVCMAA 270
+ A ++L EM+ + L + + + + GK D + + +S+ L DV +
Sbjct: 249 LDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTS 308
Query: 271 -IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K N+++EA +F++M + Y ++ Y + L+++ G
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
C +A++ ++ + G + +A + + P S+Y +++D K G++ +
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTF--EEMKKDAAPNLSTYNVLIDMLCKAGEVEAA 426
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
K+ M++ G ++ AK
Sbjct: 427 FKVRDAMKEAGLFPNVMTVNIMIDRLCKAK 456
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 132/302 (43%), Gaps = 24/302 (7%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
SY ILI ++ ++ AMK +G D+ + G+ KA +L+EM
Sbjct: 584 SYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEM 643
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM--AAIEAWGKLNKV 280
+ + T ++ A++ + D+ +++ +SN L+V + + I+ +GK+ ++
Sbjct: 644 KTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRI 703
Query: 281 EEAEAVFKRMSKTWKKLSTKHYT------ALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
+EA + + + + K L+ YT AL+K ++ L +++ K + + HI
Sbjct: 704 DEAYLIMEELMQ--KGLTPNVYTWNCLLDALVKAEEINEALVCFQNM-KNLKGTPNHI-- 758
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+ L+ + KA + + Q+ KP +Y ++ AK G+I +F
Sbjct: 759 -TYSILINGLCRVRKFNKA-FVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFE 816
Query: 395 RMRQVGYVARFKQFQTLVQ--AYINAKTPAYGIRD--RMRADNVFPNKALAAQVAQVDAF 450
R + G V + +++ +Y AY I + RM+ N+ +A +DA
Sbjct: 817 RFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTC----IALLDAL 872
Query: 451 RK 452
+K
Sbjct: 873 QK 874
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 143/350 (40%), Gaps = 7/350 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A + KA EV N M G N +L Y + K A L
Sbjct: 237 VTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L++ ++ T ++ ++M G+EPD +T L + Y + G
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ A+L M + ++ +L+ YA+ K DQ ++ NP +
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ K V++A F++M + YT+L+ K ++L+ +M + G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D G +
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEK-LFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
K+ M VG + TL+ Y ++ A + M + V PN
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 143/335 (42%), Gaps = 17/335 (5%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +D++ K + A Y Q I E + VY +L+ + KAEE+ M
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFD---LMVRIGVKPDIITYNTLIDGCCLAG 530
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T L Y R + A A+ KEM + + T
Sbjct: 531 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 590
Query: 237 LLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
++L + ++ + +S L++ I G K N +EA +F+ + T
Sbjct: 591 IILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 650
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+L T+ + ++ + + KDL + +G + + + +E G +E+
Sbjct: 651 DLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEEL 710
Query: 354 DSILLKAQQQNKFKPMFSSYML--IMDQYAKRGDI 386
D + L ++ S ML I+ + +RGDI
Sbjct: 711 DDLFLSMEENGCSA---DSRMLNSIVRKLLQRGDI 742
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 33/307 (10%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKI 167
VK+A E F +M+ GF + N+LL L K + KK +V M+ K SY I
Sbjct: 206 VKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTI 265
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
L++ GQ +L +++V M+ EG EPD T IL + + ++A + EME N
Sbjct: 266 LLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKN 325
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
+K P V I G +++EA F
Sbjct: 326 IK--------------------------------PSPHVFCTLINGLGSEKRLKEALEFF 353
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+++ + Y A++ Y ++ +V +M +SG +D ++ ++G
Sbjct: 354 EQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKG 413
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+ ++A S+ + ++ +P S+Y +++ + + +I+ M+ G +
Sbjct: 414 RKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHL 473
Query: 408 FQTLVQA 414
F TL+ +
Sbjct: 474 FSTLINS 480
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKK--LSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
IEA GK +++ ++ +S +K LS + + + + YA + + + + ++M +
Sbjct: 163 IEALGK---IKQFNVIWNLVSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKF 219
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G +G ++ L+ + V+KA + K + +FKP SY ++++ + + ++
Sbjct: 220 GFQMGVSDFNRLLDTLCKSRNVKKAQEVFDK-MKHGRFKPDIKSYTILLEGWGQDQNLLK 278
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
+++ MR G+ F L+ A+ A+ IR M A N+ P+
Sbjct: 279 LNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPS 329
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/436 (19%), Positives = 169/436 (38%), Gaps = 58/436 (13%)
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
D C D + R + K P+S V Y T++ + + A + M D
Sbjct: 22 DAGQCSDAVLHFREMSKTCP-----PDS----VTYNTMINGLSKSDRLDDAIRLLEEMVD 72
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENV------------------KLTQ- 162
GF F+ N +L+ +V + L L+E+ + KL Q
Sbjct: 73 NGFAPNVFSYNT--VLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130
Query: 163 -------------------FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+Y L+D + DL G ++V M G P++ T +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNI 190
Query: 204 AKHYVSGGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-- 260
SG + + A + KEM E + +T ++ + GK D R+ + S
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250
Query: 261 -NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
+P + + + K K++EA A+ +RM+++ + Y ++ + + +
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
L+++M + GC + + L+ + G+ E A L++ + + P +Y ++D
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG-LVEVMVEKGYVPNLFTYNSLLDM 369
Query: 380 YAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI--RDRMRADNVFPN 437
+ K+ ++ ++ M Q G V + T++ A G+ ++M ++N P+
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 429
Query: 438 KALAAQVAQVDAFRKT 453
+ +DA KT
Sbjct: 430 IVTFNTI--IDAMCKT 443
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/391 (18%), Positives = 166/391 (42%), Gaps = 23/391 (5%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNR 118
Y + ++ + KL + +A + K+ + RG + Y TL+ ++ A E+ +
Sbjct: 117 YTTVINGLCKLDQVDEACRVMDKMIQ--RGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 174
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM----EKENVKLTQFSYKILIDIKGQ 174
M ++G+ + N I++ +K+ L L E + F+Y ++D +
Sbjct: 175 MTERGYRPNAITYNN--IMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVK 232
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
S + ++VEAM S+G P+ T + L G+ ++A A+L+ M + T
Sbjct: 233 SGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 292
Query: 235 CRLLLPLYAELGKADQVARIWK-----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
++ + +LG+ D+ + + C+ P + ++A+ K K E+A + +
Sbjct: 293 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQ--PNVVTYTVLLDAFCKCGKAEDAIGLVEV 350
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
M + + Y +LL ++ + + L+ M + GC ++++ ++ + +
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
V + +LL+ N P ++ I+D K + ++F+ +++ G +
Sbjct: 411 VHEG-VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 469
Query: 410 TLVQAYINAK---TPAYGIRDRMRADNVFPN 437
+LV ++ Y +R+ R P+
Sbjct: 470 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 11/256 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL---LILYKRLDKKKVADVL 150
V + T++ V A E+FN +++ G N L L +R D+ A+ L
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQ---AEYL 487
Query: 151 L--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
L + K+ +Y +ID +S + ++ M S+G+ PD T +I+
Sbjct: 488 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 547
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-NPWLDVC 267
++A +L+ M + T L+ + + G D+ I +L S + DV
Sbjct: 548 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVV 607
Query: 268 MAAI--EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+I + K ++ +A + + M + T Y LLK + D DL + M
Sbjct: 608 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVM 667
Query: 326 AESGCHIGPLAWDALV 341
+ GC + LV
Sbjct: 668 RQCGCEPDNATYTTLV 683
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 132/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +KS G PD + +
Sbjct: 25 MEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGFTPDLVAYNAMINVFGKAKL 84
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 85 FREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 144
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 145 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 204
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 205 IEQNVVTYNSMIMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 263
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 264 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 317
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 109/267 (40%), Gaps = 43/267 (16%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 72 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 131
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL----------------------------- 151
+ + CN ++ +Y +L K AD L
Sbjct: 132 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 191
Query: 152 -------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
LM+++N++ +Y +I I G++ + + +++ M+S GIEP+S T + +
Sbjct: 192 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 251
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNP 262
+ G+ ++A + +++ ++ + + ++ Y G R+ + N
Sbjct: 252 SIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNI 311
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKR 289
D + + G ++EEA VF++
Sbjct: 312 PRDTAIHILAGAG---RIEEATYVFRQ 335
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 134/318 (42%), Gaps = 15/318 (4%)
Query: 145 KVADVLLLMEK---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
VAD +M+K + F+Y +I + +DL QV M EG EP++ T +
Sbjct: 230 NVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYS 289
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----K 256
L GR +A +++EM + TC + ++G + R++ K
Sbjct: 290 TLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNK 349
Query: 257 LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
CE N + + + + KV A +F RMS+ +T Y AL+ + +++ +
Sbjct: 350 GCEPNVYTYTALISGLCVSGILKV--AIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
++ M +GC + ++ ++K + G+ +KA +++ Q +Y I
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKA-MLVMNNMLQRGHSANLVTYNTI 466
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNV 434
+ Y G+ S +I MR G + L+ + I+ A+G+ + M D +
Sbjct: 467 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526
Query: 435 FPNKALAAQVAQVDAFRK 452
PN+ A +D + K
Sbjct: 527 CPNE--VTYTALIDGYCK 542
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 141/366 (38%), Gaps = 11/366 (3%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVAD 148
F V Y L+ V +K A V N M G N+++ Y L D KK
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAML 446
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
V+ M + +Y +I S + T ++++ M+ G +PD + L +
Sbjct: 447 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 506
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLD 265
+ E A + EM D L + T L+ Y + K D + K P +
Sbjct: 507 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 566
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I K N AE + K M + + YTA++ + S ++ +M
Sbjct: 567 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E GC L + +L++ + G+VE+A++ L +++ P +Y+ +++ Y G
Sbjct: 627 IEQGCLPNLLTYSSLIRALGQEGKVEEAEN-LFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRA--DNVFPNKALAAQ 443
+ RM + G + L++ N Y + D+ A +V PN + Q
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN----EYLLADQRLAALPDVVPNCSFGYQ 741
Query: 444 VAQVDA 449
DA
Sbjct: 742 TTDQDA 747
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 3/178 (1%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P L + A I A K V +AE + K++ ++ T YT+++ + L +
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
QMA+ GC + + L+ + G V +A L++ + P + +
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD-LIREMILHGILPTAHTCTGPIIALC 331
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
G ++F M+ G + L+ + A G+ RM D VFPN
Sbjct: 332 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 7/266 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLL 152
+VY TL+ N V++AE +F MK KG TS N L+ Y +R+ + + ++LL
Sbjct: 349 IVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLE 408
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGM--DQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ ++ SY LI G+ ++ M D + MK GI+P S + L Y G
Sbjct: 409 MQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLR-MKKVGIKPTSHSYTALIHAYSVG 467
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA- 269
G EKA + M+ + +K T LL + G + +IWKL S+ +
Sbjct: 468 GWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTF 527
Query: 270 --AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
++ + K EA V K + + Y L+ YA S+ L+K+M
Sbjct: 528 NILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTS 587
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKA 353
+ + ++ +V + ++A
Sbjct: 588 LNLKPDSITYSTMIYAYVRVRDFKRA 613
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 150/361 (41%), Gaps = 31/361 (8%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL----MEKENVKLT 161
G++ K A E F RM KG ++ L L K + + + L+ MEK+ +
Sbjct: 291 GHSAKDAWEFFQRMNRKG---VKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSN 347
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
Y L+D +SN + + + MK++G+ P S+T IL Y + E E +L
Sbjct: 348 AIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLL 407
Query: 222 EMEGDNLKEH--RWTCRLLLPLYAELGK-----ADQVARIWKLCESNPWLDVCMAAIEAW 274
EM+ L+ + +TC L+ Y K AD R+ K+ P A I A+
Sbjct: 408 EMQDMGLEPNVKSYTC--LISAYGRQKKMSDMAADAFLRMKKVG-IKPTSHSYTALIHAY 464
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY---ADHKMLSKGKDLVKQMAESGCH 331
E+A F+ M + K S + YTALL + D + L K + K M
Sbjct: 465 SVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMK---IWKLMLSDKIE 521
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ ++ L+ + G +A ++ + + F+P +Y ++M+ YA+ G +
Sbjct: 522 GTRVTFNILLDGFAKQGHYMEARDVIFEFGKIG-FQPTVMTYNMLMNAYARGGQHSRLPQ 580
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFR 451
+ M + + T++ AY+ +RD RA + QV +++
Sbjct: 581 LLKEMTSLNLKPDSITYSTMIYAYVR-------VRDFKRAFFYHKQMVKSGQVPDPQSYQ 633
Query: 452 K 452
K
Sbjct: 634 K 634
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 117/290 (40%), Gaps = 66/290 (22%)
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
VT+ AC+ +L+ L + + D L+++ + K QF D++ ++ ++G+
Sbjct: 205 VTARACS---LLFPMLGRAGMGDDLMVLLRNLPKTRQFR-----DVRIYNSAISGLS--- 253
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
S GR + A + EME +N++ TC +++ + +
Sbjct: 254 -----------------------SCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKD 290
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
G +A +AW F+RM++ K S + AL
Sbjct: 291 GH---------------------SAKDAW----------EFFQRMNRKGVKWSLEVLGAL 319
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+K + D + ++ + +M + G + ++ L+ + + VE+A+ L +
Sbjct: 320 IKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEG-LFGEMKAKG 378
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
P ++Y ++MD Y++R E + M+ +G K + L+ AY
Sbjct: 379 VMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAY 428
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 141/370 (38%), Gaps = 44/370 (11%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLME 154
Y T++ G +K+A+E + K++G F+ L+ Y K+ D K A +L +
Sbjct: 344 YNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIA 403
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ K SY I ++ V E M +G+ PD+ +L GR
Sbjct: 404 EIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFP 463
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC---ESNPWLDVCMAAI 271
+ +L EM N++ + L+ + G+ D+ +I+K+ +P + A I
Sbjct: 464 AMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMI 523
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ + K K+ +A + +M Y+ ++ Y +S + QM
Sbjct: 524 KGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM------ 577
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
++KFKP +Y +++ + K+ D+ EK
Sbjct: 578 ------------------------------MKHKFKPNVITYTSLINGFCKKADMIRAEK 607
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDA 449
+F M+ V + TLV + A P A I + M + PN A + ++
Sbjct: 608 VFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYL--ING 665
Query: 450 FRKTAVSELL 459
TA S +L
Sbjct: 666 LTNTATSPVL 675
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 125/290 (43%), Gaps = 12/290 (4%)
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
D++++ G D+ T +I+ K + G+ E+ ++K+ G H +++
Sbjct: 186 DKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDG 245
Query: 242 YAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
Y + G R K + P ++ A I + K + E + + M+ ++
Sbjct: 246 YCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMN 305
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
K + ++ + +++K + +++MAE GC ++ ++ +GG +++AD L
Sbjct: 306 VKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLE 365
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI-- 416
KA+++ F SY +M Y K+GD + R+ ++G + + +
Sbjct: 366 KAKERGLLPNKF-SYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVH 424
Query: 417 NAKTPAYGIRDRMRADNVFPN----KALAAQVAQVDAF--RKTAVSELLD 460
A +R++M VFP+ L + + + F K +SE+LD
Sbjct: 425 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLD 474
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 138/332 (41%), Gaps = 44/332 (13%)
Query: 87 PESFRGEVVYRTLLANCVAGNN-VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
P+ F Y T++ NC++ N + +A+ + N+M D+G + N L++ + +
Sbjct: 333 PDVF----TYNTVI-NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL--CSQNR 385
Query: 146 VADVLLLMEKENVKLTQ---FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
+ + L L + VK +++ ILI+ + D ++ E MKS G PD T I
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNI 445
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
L H S G+ A +LKEME + T +
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTI------------------------ 481
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
I+A K ++EEAE VF +M S + L+ K + +L+
Sbjct: 482 --------IDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELI 533
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+QM + G + +++++ + + G+++KA I L+ N F+ +Y +++ K
Sbjct: 534 EQMVKEGLQPSNITYNSILTHYCKQGDLKKAADI-LETMTANGFEIDVVTYGTLINGLCK 592
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
G K+ MR G K + ++Q+
Sbjct: 593 AGRTQVALKLLRGMRIKGIRPTPKAYNPVIQS 624
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 144/398 (36%), Gaps = 57/398 (14%)
Query: 71 AKLRGLQKAESYIQKIPESFRGEV---VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
A+LR A ++ +F + VY LL G+ +K E V+N M D+G
Sbjct: 135 ARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPD 194
Query: 128 SFACNQLLILYKRLDKKKVADVLLL--MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
N L+ R + + A VL+L M V + ++ L+ + + +V
Sbjct: 195 VVTLNTLIKALCRAHQVRTA-VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVK 253
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
M G P T +L Y GR E A +++ D + + T + +
Sbjct: 254 TKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQN 313
Query: 246 GKADQVARIWKL------------------CES-NPWLD------------VCMAAIEAW 274
G ++ L C S N LD C+ +
Sbjct: 314 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTF 373
Query: 275 GKL-------NKVEEAEAVFKRMSKTWKKLSTKHYT------ALLKVYADHKMLSKGKDL 321
L N++EEA + + + T K LS YT AL KV H G L
Sbjct: 374 NTLIVALCSQNRLEEALDLAREL--TVKGLSPDVYTFNILINALCKVGDPHL----GIRL 427
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
++M SGC + ++ L+ G++ A LLK + N +Y I+D
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALD-LLKEMESNGCPRSTVTYNTIIDALC 486
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
K+ I E++F +M G F TL+ AK
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAK 524
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 122/297 (41%), Gaps = 41/297 (13%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLL 151
EV Y L+ + + + A ++ M+ G P ++ N ++ L K++ ++ +V
Sbjct: 440 EVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFD 499
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M+ + + ++ LID ++ + +++E M EG++P + T + HY G
Sbjct: 500 QMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQG 559
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA----RIWKLCESNPWLDVC 267
+KA +L+ M + + T L+ + G+ QVA R ++ P
Sbjct: 560 DLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRT-QVALKLLRGMRIKGIRPTPKAY 618
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
I++ + N + +A ++F+ M++ + Y + + L +G +K+
Sbjct: 619 NPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVF------RGLCRGGGPIKE--- 669
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
A+D LV++ +G F P FSS+ ++ + G
Sbjct: 670 --------AFDFLVEMVNKG------------------FMPEFSSFRMLAEGLLNLG 700
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 8/158 (5%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL---LILYKRLDKKKVA 147
R V Y T++ +++AEEVF++M G ++ N L L KR+D
Sbjct: 473 RSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRID--DAT 530
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
+++ M KE ++ + +Y ++ + DL ++E M + G E D T L
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
GR + A LK + G +K R T + P+ L
Sbjct: 591 CKAGRTQVA---LKLLRGMRIKGIRPTPKAYNPVIQSL 625
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 153/373 (41%), Gaps = 13/373 (3%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
+P+ F +++ L N + K +F + G + + C+ LL + K
Sbjct: 117 VPDGFTYSILFDGLSRN----GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVS 172
Query: 146 VAD-VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+A+ VL + + T+ Y LI+ Q+ +L G MKS I+PD T L
Sbjct: 173 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 232
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--- 261
R A+ +L EM+ + + T L+ Y G+ ++ + + N
Sbjct: 233 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 292
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P + + + A+ K K+ EA A+ M + + Y A++ Y +H + L
Sbjct: 293 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 352
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
V++M +G + ++ L+K ++ +A+ I + + ++ P SY ++
Sbjct: 353 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI-INSLSNHRLIPDAVSYNTLISACC 411
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKA 439
RG+I + RM + G + + + L+ A + +M +NV P+ A
Sbjct: 412 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 471
Query: 440 LAAQVAQVDAFRK 452
+ V+A+ K
Sbjct: 472 I--HNIMVEAYSK 482
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 5/309 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V+Y TL+ ++ A F +MK + N L+ L K D+L+
Sbjct: 191 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 250
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ V T ++ LID G++ L V+ M+ G++P+ + + + G+
Sbjct: 251 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 310
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
+A A+L +M ++ + ++ Y E G DQ + + +SN P +
Sbjct: 311 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 370
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +++ EAE + +S Y L+ + K DL ++M + G
Sbjct: 371 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 430
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ L+ G + + + L + QN P + + ++++ Y+K G+
Sbjct: 431 IKSTVRTYHQLISGLGGAGRLNEME-YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA 489
Query: 390 EKIFHRMRQ 398
E + M Q
Sbjct: 490 EDLRKEMLQ 498
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 8/258 (3%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y L+ ++ L + VV M+ G++PD T ++L Y GR E A +LKEM
Sbjct: 313 AYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEM 372
Query: 224 EGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
E N++ + + +L Y + G K+ QV + K P I+ +GK N +
Sbjct: 373 EASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCL 432
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
+ A A F+RM + L+ + ++L +M + G ++ +
Sbjct: 433 DHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIM 492
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ E E+ + L K Q Q +P +Y ++D Y K G + ++ G
Sbjct: 493 INSMGEQQRWEQVTAFLSKMQSQG-LQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTG 551
Query: 401 YVARFKQFQTLVQAYINA 418
FK T+ A INA
Sbjct: 552 ----FKPTSTMYNALINA 565
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 131/301 (43%), Gaps = 10/301 (3%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K+ + LL +++ LT +Y LI ++ D+ ++ M+ +G +PD + +
Sbjct: 153 EKLYEAFLLSQRQ--VLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSI 210
Query: 204 AKHYVSGGRKEKA--EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
++ + + + + E+E D ++ ++ +++ G + R + +SN
Sbjct: 211 IQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSN 270
Query: 262 ---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P +A I A G + EAEA+F+ + + + T+ Y ALLK Y L
Sbjct: 271 GLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDA 330
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ +V +M ++G + L+ ++ G E A I+LK + + +P + I+
Sbjct: 331 EFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESA-RIVLKEMEASNVQPNSYVFSRILA 389
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFP 436
Y +G+ + ++ M+ G + ++ + N A +RM ++ + P
Sbjct: 390 NYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPP 449
Query: 437 N 437
+
Sbjct: 450 D 450
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 117/297 (39%), Gaps = 9/297 (3%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK---KKVADVLLLMEKENVKLTQFSYK 166
+ A V M+ S+ +++L Y+ DK +K VL M+ V+ + Y
Sbjct: 363 ESARIVLKEMEASNVQPNSYVFSRILANYR--DKGEWQKSFQVLKDMKSSGVQPDRHFYN 420
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++ID G+ N L E M SEGI PD T L + GR + AE + EM+
Sbjct: 421 VMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQR 480
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEA 283
T +++ E + +QV +S P ++ +GK + +A
Sbjct: 481 GYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDA 540
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+ + T K ++ Y AL+ YA + + + M G LA ++L+
Sbjct: 541 IECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINA 600
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
E +A ++ L+ ++N +P +Y +M + ++ M G
Sbjct: 601 FGEDRRDAEAFAV-LQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASG 656
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSY 165
N + A F RM +G P N L+ + + + +A+ L M++ +Y
Sbjct: 430 NCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTY 489
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I+ G+ + + M+S+G++P+S T L Y GR A L+ ++
Sbjct: 490 NIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKS 549
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEE 282
K L+ YA+ G ++ ++L + P L + I A+G+ + E
Sbjct: 550 TGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAE 609
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A AV + M + + YT L+K + K + ++M SGC
Sbjct: 610 AFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGC 657
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/363 (18%), Positives = 136/363 (37%), Gaps = 42/363 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP---VTSFACNQLLILYKRLDKKKVADVL 150
+ Y L+ C +V+KA + ++M+ G+ V + Q L ++D + +
Sbjct: 170 LTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLY 229
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST--QAILA---- 204
+E + +++ +I ++ D T + + +S G+ P ST ILA
Sbjct: 230 AEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNS 289
Query: 205 -----------------------------KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
K YV G + AE ++ EME +K T
Sbjct: 290 GRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTY 349
Query: 236 RLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
LL+ +YA G+ + + K E++ P V + + + +++ V K M
Sbjct: 350 SLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKS 409
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ + Y ++ + + L ++M G + W+ L+ H + G +
Sbjct: 410 SGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDM 469
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
A+ L QQ + P ++Y ++++ ++ +M+ G + TLV
Sbjct: 470 AEE-LFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLV 528
Query: 413 QAY 415
Y
Sbjct: 529 DVY 531
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 146/338 (43%), Gaps = 11/338 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y +L N + A +F+ M+ + + + L+ + K + D L
Sbjct: 137 YNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSF---GKAGMFDESLFWLQ 193
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME++ V Y LI++ + D + + +K GI PD + +
Sbjct: 194 QMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKAR 253
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CM 268
+A ++ EM + + LL +Y E K + ++ ++ E+N LD+ C
Sbjct: 254 LFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCN 313
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+L+ V+EA+ +F M K + + Y LLKVY + ++ + L + M
Sbjct: 314 IMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRK 373
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ ++ ++K++ + E EKA + L++ Q+ +P +Y I+ + K G +
Sbjct: 374 EIEQNVVTYNTMIKIYGKSLEHEKATN-LVQEMQKRGIEPNAITYSTIISIWGKAGKLDR 432
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A A+ R
Sbjct: 433 AAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 470
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 155/375 (41%), Gaps = 46/375 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +++ K R ++A + ++ E V Y TLL+ V +A VF M
Sbjct: 242 YNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMN 301
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +LD K AD L M K ++ SY L+ + G++
Sbjct: 302 EANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFG 361
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + K Y EKA +++EM+ ++ + T ++
Sbjct: 362 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTII 421
Query: 240 PLYAELGKADQVARIW-KLCESNPWLDVCM------------------------------ 268
++ + GK D+ A ++ KL S +D +
Sbjct: 422 SIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDII 481
Query: 269 ---AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
AI+ + ++EEA VF++ + + ++++++ +K + ++ ++M
Sbjct: 482 PRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKM 541
Query: 326 AESG----CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+G + L +A KL E EKAD++ + Q++ P + ++ Y
Sbjct: 542 RGAGYFPDSDVIALVLNAYGKLR----EFEKADAVYREMQEEECVFPD-EVHFQMLSLYG 596
Query: 382 KRGDIHSTEKIFHRM 396
R D E +F ++
Sbjct: 597 ARKDFIMVESLFEKL 611
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 148/361 (40%), Gaps = 11/361 (3%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
+P+ F +++ L N + K +F + G + + C+ LL + K
Sbjct: 302 VPDGFTYSILFDGLSRN----GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVS 357
Query: 146 VAD-VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+A+ VL + + T+ Y LI+ Q+ +L G MKS I+PD T L
Sbjct: 358 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 417
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--- 261
R A+ +L EM+ + + T L+ Y G+ ++ + + N
Sbjct: 418 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 477
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P + + + A+ K K+ EA A+ M + + Y A++ Y +H + L
Sbjct: 478 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 537
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
V++M +G + ++ L+K ++ +A+ I + + ++ P SY ++
Sbjct: 538 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI-INSLSNHRLIPDAVSYNTLISACC 596
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKA 439
RG+I + RM + G + + + L+ A + +M +NV P+ A
Sbjct: 597 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 656
Query: 440 L 440
+
Sbjct: 657 I 657
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 5/309 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V+Y TL+ ++ A F +MK + N L+ L K D+L+
Sbjct: 376 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 435
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ V T ++ LID G++ L V+ M+ G++P+ + + + G+
Sbjct: 436 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
+A A+L +M ++ + ++ Y E G DQ + + +SN P +
Sbjct: 496 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 555
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +++ EAE + +S Y L+ + K DL ++M + G
Sbjct: 556 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 615
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ L+ G + + + L + QN P + + ++++ Y+K G+
Sbjct: 616 IKSTVRTYHQLISGLGGAGRLNEME-YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA 674
Query: 390 EKIFHRMRQ 398
E + M Q
Sbjct: 675 EDLRKEMLQ 683
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 155/364 (42%), Gaps = 19/364 (5%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y C+ + + R + A +++ + G + Y L+ A + KA+E++ +M+
Sbjct: 273 YTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMR 332
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLL------MEKENVKLTQFSYKILIDIKG 173
+S + +++ + +DK KV D+ + ME + +Y ILI+
Sbjct: 333 -----ASSHSPDRVTYI-TLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALC 386
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
+S D+ +++ M ++GI P+ T + + R ++A +L+ ME +K +
Sbjct: 387 KSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAF 446
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
+ L + Y + G + ++ + P + C A++ + ++ EAE +F +
Sbjct: 447 SYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDL 506
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
K + Y L+K Y+ + K L+ +M GC + ++L+ + G V
Sbjct: 507 HKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRV 566
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
+ A + + + K P +Y +++ K G I ++F M + G F +
Sbjct: 567 DAAWKMFGRLKNL-KLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNS 625
Query: 411 LVQA 414
L+
Sbjct: 626 LLDC 629
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 133/314 (42%), Gaps = 7/314 (2%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
+A +V+ RM +G + + L++ L +R D +K+ ++L M+ ++ ++Y I
Sbjct: 217 NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTIC 276
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I G++ + + + M EG PD T +L + G+ +KA+ + +M +
Sbjct: 277 IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSH 336
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEA 285
R T L+ + ++G + V R W E + P + IEA K V+ A
Sbjct: 337 SPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFD 396
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+ M+ + Y ++ + L + +L++ M G + P A+ ++ +
Sbjct: 397 MLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG--VKPTAFSYVLFIDY 454
Query: 346 EGGEVEKADSI-LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
G + A +I + ++ P ++ + A+ G I E IF+ + + G
Sbjct: 455 YGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPD 514
Query: 405 FKQFQTLVQAYINA 418
+ L++ Y A
Sbjct: 515 SVTYNMLMKCYSKA 528
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/301 (18%), Positives = 122/301 (40%), Gaps = 10/301 (3%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ F+Y +L+D G+S + + + M+S G EP++ T I+ V
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWLDVC 267
KA + E+ + T L+ + G+++Q +I++ C N +
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ I +GK +++ A +FK+M K + K YT L++ + + +++
Sbjct: 942 L--INGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKL 999
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G ++++ ++ + +++A S L + P +Y ++ G +
Sbjct: 1000 TGLDPDTVSYNFIINGLGKSRRLDEALS-LFSEMKNRGISPDLYTYNALILHLGIAGKVD 1058
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPNKALAAQVA 445
K++ ++ VG + L++ + K A+ + +M PN AQ+
Sbjct: 1059 VAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLP 1118
Query: 446 Q 446
Sbjct: 1119 N 1119
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 71/177 (40%), Gaps = 8/177 (4%)
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSK--TWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
D C +E + ++E+ VF M K ++ L+T Y + K + + + +
Sbjct: 132 DACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTT--YMTIFKALSIKGGIGRAPFAL 189
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++M E G + +++ L+ L + G E + K KP +Y +M +
Sbjct: 190 RKMTEVGFILNAYSYNGLIHLLLPGFCNEALK--VYKRMISEGMKPSMKTYSALMVALGR 247
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
RGD + M+ +G + ++A A+ A+GI M + P+
Sbjct: 248 RGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPD 304
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 90/221 (40%), Gaps = 16/221 (7%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
K+ GI P + L + EKA + ++M+ + +T LLL + GK+
Sbjct: 788 KNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAH---GKS 844
Query: 249 DQVARIWKL--------CESNPWL-DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ +++ L CE N ++ ++A+ LNK + ++ MS +
Sbjct: 845 KRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA--LDLYYELMSGDFSPTPC 902
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y L+ + + ++M + GC + ++ L+ + GE++ A L K
Sbjct: 903 T-YGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE-LFK 960
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ +P SY ++++ G I + F ++ G
Sbjct: 961 KMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG 1001
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 7/266 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLL 152
+VY TL+ N V++AE +F MK KG TS N L+ Y +R+ + + ++LL
Sbjct: 349 IVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLE 408
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGM--DQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ ++ SY LI G+ ++ M D + MK GI+P S + L Y G
Sbjct: 409 MQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLR-MKKVGIKPTSHSYTALIHAYSVG 467
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA- 269
G EKA + M+ + +K T LL + G + +IWKL S+ +
Sbjct: 468 GWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTF 527
Query: 270 --AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
++ + K EA V K + + Y L+ YA S+ L+K+M
Sbjct: 528 NILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTS 587
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKA 353
+ + ++ +V + ++A
Sbjct: 588 LNLKPDSITYSTMIYAYVRVRDFKRA 613
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 150/361 (41%), Gaps = 31/361 (8%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL----MEKENVKLT 161
G++ K A E F RM KG ++ L L K + + + L+ MEK+ +
Sbjct: 291 GHSAKDAWEFFQRMNRKG---VKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSN 347
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
Y L+D +SN + + + MK++G+ P S+T IL Y + E E +L
Sbjct: 348 AIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLL 407
Query: 222 EMEGDNLKEH--RWTCRLLLPLYAELGK-----ADQVARIWKLCESNPWLDVCMAAIEAW 274
EM+ L+ + +TC L+ Y K AD R+ K+ P A I A+
Sbjct: 408 EMQDMGLEPNVKSYTC--LISAYGRQKKMSDMAADAFLRMKKVG-IKPTSHSYTALIHAY 464
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY---ADHKMLSKGKDLVKQMAESGCH 331
E+A F+ M + K S + YTALL + D + L K + K M
Sbjct: 465 SVGGWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMK---IWKLMLSDKIE 521
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ ++ L+ + G +A ++ + + F+P +Y ++M+ YA+ G +
Sbjct: 522 GTRVTFNILLDGFAKQGHYMEARDVIFEFGKIG-FQPTVMTYNMLMNAYARGGQHSRLPQ 580
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFR 451
+ M + + T++ AY+ +RD RA + QV +++
Sbjct: 581 LLKEMTSLNLKPDSITYSTMIYAYVR-------VRDFKRAFFYHKQMVKSGQVPDPQSYQ 633
Query: 452 K 452
K
Sbjct: 634 K 634
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 117/290 (40%), Gaps = 66/290 (22%)
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
VT+ AC+ +L+ L + + D L+++ + K QF D++ ++ ++G+
Sbjct: 205 VTARACS---LLFPMLGRAGMGDDLMVLLRNLPKTRQFR-----DVRIYNSAISGLS--- 253
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
S GR + A + EME +N++ TC +++ + +
Sbjct: 254 -----------------------SCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKD 290
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
G +A +AW F+RM++ K S + AL
Sbjct: 291 GH---------------------SAKDAW----------EFFQRMNRKGVKWSLEVLGAL 319
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+K + D + ++ + +M + G + ++ L+ + + VE+A+ L +
Sbjct: 320 IKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEG-LFGEMKAKG 378
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
P ++Y ++MD Y++R E + M+ +G K + L+ AY
Sbjct: 379 VMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAY 428
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 143/310 (46%), Gaps = 8/310 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
+Y T+L V+KA + MK+KG +T + +L+ + K + A + + M
Sbjct: 267 IYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNM 326
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST-QAILAKHYVSGGR 212
KE K LI++ G++ L ++ E M+S P+ T ++ + S R
Sbjct: 327 LKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKAR 386
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA-- 270
+A ++M+ + + +T +L+ + + + ++ + + + + C AA
Sbjct: 387 ASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAP-CPAAYC 445
Query: 271 --IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I A GK + E A +F+ + + S + Y ++K LS+ DL +M +
Sbjct: 446 SLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKL 505
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
GC+ A++AL+ V G ++A S LL+ ++N P +S+ +I++ +A+ G
Sbjct: 506 GCNPDVYAYNALMSGMVRVGMTDEAHS-LLRTMEENGCTPDLNSHNIILNGFARTGGPKG 564
Query: 389 TEKIFHRMRQ 398
++F RM+
Sbjct: 565 AIEMFTRMKN 574
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 114/246 (46%), Gaps = 10/246 (4%)
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM---AA 270
KA ++ +++G K T ++ + + G ++V ++ ++C L + A
Sbjct: 177 KALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSAL 236
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+GKL + + A ++F M + + K YT +L +Y + K LV++M E GC
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGC 296
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + L+K + G+VE+A SI + ++ KP +++ K G +
Sbjct: 297 ALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEG-CKPDVVLINNLINLLGKAGRLADAI 355
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAK---TPAYGIRDRMRADNVFPNKALAAQVAQV 447
K+F M + + T+++A +K + A+ ++M+ + V P+ + + +
Sbjct: 356 KLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSIL--I 413
Query: 448 DAFRKT 453
D F KT
Sbjct: 414 DGFCKT 419
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/376 (19%), Positives = 145/376 (38%), Gaps = 53/376 (14%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLT 161
C +G V A + + M G + + N LL Y R D +V ++L +ME E ++ T
Sbjct: 142 CKSGR-VDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEAT 200
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKS------------------------------- 190
+Y IL+D + D++ ++ + MK+
Sbjct: 201 VGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLD 260
Query: 191 ----EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
G+EP+ T +L K + G+ E AE +L +M+G + ++ ++ Y G
Sbjct: 261 ECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKG 320
Query: 247 KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
D +I AA+E G + + + + + YT L+
Sbjct: 321 MVDDALKIK-------------AAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLI 367
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
++ + + + L ++MAE G L + ++ + + G + +A+ K ++ F
Sbjct: 368 SIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAER-FRKEMEKKGF 426
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYG 424
P +Y ++ + G + K+F M+Q G + L+ A+
Sbjct: 427 VPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQ 486
Query: 425 IRDRMRADNVFPNKAL 440
+ D M + P+ +L
Sbjct: 487 LYDDMLKAGLIPDDSL 502
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 135/333 (40%), Gaps = 29/333 (8%)
Query: 41 GKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTL 99
G+ ++ E +E N+ ++ Y +D ++ R + K E+ ++ + G+V T
Sbjct: 183 GRVQEILEIME-NEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTA 241
Query: 100 LAN--CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKE 156
+ N C AGN +++A +V + G L+ + ++ + + A++LL M+ +
Sbjct: 242 VINAYCRAGN-MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQ 300
Query: 157 NVKLTQFSYKILIDI---KGQSNDLTGMDQVVEAMKSE----------------GIEPDS 197
V L Q + +ID KG +D + +E + E G+ P+
Sbjct: 301 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNY 360
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
T L + G +A + +EM T +++ YA+ G+ + R K
Sbjct: 361 VTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKE 420
Query: 258 CESNPWL-DVCMAAIEAWGKL--NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
E ++ DV A G KV+ A +F+ M + + + YTAL+ A
Sbjct: 421 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 480
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALV-KLHVE 346
L M ++G + ALV LH +
Sbjct: 481 SEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTD 513
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 183/483 (37%), Gaps = 57/483 (11%)
Query: 6 ISIHS--TLTKY-AEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
IS H TL + A ++L A+I + L + AL L W D
Sbjct: 82 ISSHPLPTLPAFLASRRDELLPADIPSLLKALELSGHWEWALALLRWAGAEGAAD----- 136
Query: 63 YASCLDLIAKLRGLQKAESYI------QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEV 115
AS L+++ + G + + +P R +V Y T+L ++A E+
Sbjct: 137 -ASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVEL 195
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--MEKENVKLTQFSYKILIDIKG 173
F ++ +G T N +L +Y R+ + V LL M V+ F+ +I
Sbjct: 196 FAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACC 255
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
+ + E +K+ G P T L + + G +A +LKEME D +
Sbjct: 256 RDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAV 315
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA---AIEAWGKLNKVEEAEAVFKRM 290
T L YA G ++ A+ S L + A+G + KV+EA A+F +M
Sbjct: 316 TYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQM 375
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG-- 348
K+ + Y +L + + +++ +M+ SGC + W+ ++ + + G
Sbjct: 376 KKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGME 435
Query: 349 -------EVEKADSILLKAQQQNK-------------------------FKPMFSSYMLI 376
E K+ + L N F P ++Y +
Sbjct: 436 DYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNAL 495
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY--GIRDRMRADNV 434
++ +++GD + + I +MR G+ + + L+Q Y A I + V
Sbjct: 496 LNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTV 555
Query: 435 FPN 437
FP+
Sbjct: 556 FPS 558
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 127/325 (39%), Gaps = 38/325 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V + T+LA C V MK G ++ N L+ Y R + A +
Sbjct: 420 VTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNE 479
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M +Y L+++ + D + +V M+++G +P+ + ++L + Y GG
Sbjct: 480 MTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGN 539
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
+A+ KE+ G + R L+ +A
Sbjct: 540 IAGIDAIEKEVYGGTVFPSWVILRTLV-----------IANF------------------ 570
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
K ++ E F+ + + ++L +YA + M SK ++ + +SG
Sbjct: 571 ---KCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSP 627
Query: 333 GPLAWDALVKLHVEGGEVEKADSIL--LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ +++L+ ++ + E +A+ IL LK+ Q KP SY +++ + K+G I +
Sbjct: 628 DLITYNSLMDMYAKCSESWEAEKILNQLKSSQ---VKPDVVSYNTVINGFCKQGLIKEAQ 684
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
+I M G + TLV Y
Sbjct: 685 RILSEMIADGMAPCVVTYHTLVGGY 709
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 4/208 (1%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVAD 148
F V+ RTL+ + E+ F +K +G+ N +L +Y K KV +
Sbjct: 556 FPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTE 615
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
+ +++ + +Y L+D+ + ++ ++++ +KS ++PD + + +
Sbjct: 616 IFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFC 675
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL---GKADQVARIWKLCESNPWLD 265
G ++A+ +L EM D + T L+ YA L +A +V P
Sbjct: 676 KQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMEL 735
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
++++ K + EEA + +S+T
Sbjct: 736 TYRRVVDSYCKAKRFEEARSFLSEVSET 763
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 143/310 (46%), Gaps = 8/310 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
+Y T+L V+KA + MK+KG +T + +L+ + K + A + + M
Sbjct: 267 IYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNM 326
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST-QAILAKHYVSGGR 212
KE K LI++ G++ L ++ E M+S P+ T ++ + S R
Sbjct: 327 LKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKAR 386
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA-- 270
+A ++M+ + + +T +L+ + + + ++ + + + + C AA
Sbjct: 387 ASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAP-CPAAYC 445
Query: 271 --IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I A GK + E A +F+ + + S + Y ++K LS+ DL +M +
Sbjct: 446 SLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKL 505
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
GC+ A++AL+ V G ++A S LL+ ++N P +S+ +I++ +A+ G
Sbjct: 506 GCNPDVYAYNALMSGMVRVGMTDEAHS-LLRTMEENGCTPDLNSHNIILNGFARTGGPKG 564
Query: 389 TEKIFHRMRQ 398
++F RM+
Sbjct: 565 AIEMFTRMKN 574
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 114/246 (46%), Gaps = 10/246 (4%)
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM---AA 270
KA ++ +++G K T ++ + + G ++V ++ ++C L + A
Sbjct: 177 KALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSAL 236
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+GKL + + A ++F M + + K YT +L +Y + K LV++M E GC
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGC 296
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + L+K + G+VE+A SI + ++ KP +++ K G +
Sbjct: 297 ALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEG-CKPDVVLINNLINLLGKAGRLADAI 355
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAK---TPAYGIRDRMRADNVFPNKALAAQVAQV 447
K+F M + + T+++A +K + A+ ++M+ + V P+ + + +
Sbjct: 356 KLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSIL--I 413
Query: 448 DAFRKT 453
D F KT
Sbjct: 414 DGFCKT 419
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 144/347 (41%), Gaps = 17/347 (4%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y TL+ N+ A V+ M + G N +L Y R + ++ ++ +M
Sbjct: 267 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 326
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
EKE + T SY ILI ++ + + E + + DS T +L G
Sbjct: 327 EKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 385
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCM 268
KA ++L+E E + ++ G+ D+VA + C+ NP+ VC
Sbjct: 386 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPY--VCN 443
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I + + +K+E+A F M + Y L+ + + S+ LVK+M +
Sbjct: 444 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQK 503
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + + L+ +G +++ A ++ +A ++ FKP + +I+ G +
Sbjct: 504 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVED 562
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVF 435
+++ M+Q V TL++ + Y +RD RA ++
Sbjct: 563 ALQLYSEMKQRNCVPNLVTHNTLMEGF-------YKVRDFERASKIW 602
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 11/263 (4%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
++Y LI S +L G +V + M G+ PD + Y+ GR E+ + K
Sbjct: 266 YTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKV 325
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL------CESNPWLDVCMAAIEAWGK 276
ME + + L+ L+ E K D+ IW+L C + V + + G
Sbjct: 326 MEKEGCRTVVSYNILIRGLF-ENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGY 384
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
LNK A ++ + L T Y++++ L + ++ QM + GC P
Sbjct: 385 LNK---ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYV 441
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+A++ V ++E A + F P +Y +++ +K + M
Sbjct: 442 CNAVINGFVRASKLEDALRFFGNMVSKGCF-PTVVTYNTLINGLSKAERFSEAYALVKEM 500
Query: 397 RQVGYVARFKQFQTLVQAYINAK 419
Q G+ + L+ K
Sbjct: 501 LQKGWKPNMITYSLLMNGLCQGK 523
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 98/268 (36%), Gaps = 19/268 (7%)
Query: 99 LLANCVAGNNVK-KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD--------V 149
L+A+ A N++ +A ++F RM + F C + Y L +
Sbjct: 58 LVAHAYAKNSMPDQALDIFQRMHE------IFGCQPGIRSYNSLLNALIESNKWDEAESF 111
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
L E + +Y ILI I + +++ M +G PD + L
Sbjct: 112 FLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAK 171
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
G A + EM + +L+ + + G + IW+ P + +
Sbjct: 172 NGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIP 231
Query: 270 A----IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ I K K +E+ ++ RM K + Y+ L+ L + K+M
Sbjct: 232 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM 291
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKA 353
AE+G + ++ ++ ++ G +E+
Sbjct: 292 AENGVSPDVVVYNTMLNGYLRAGRIEEC 319
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 8/137 (5%)
Query: 267 CMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
C I ++ L NK +EAE+ F + + Y L+K+ K K K
Sbjct: 85 CQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAK 144
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
+L+ M G ++ L+ + G + A L + P + Y +++D
Sbjct: 145 ELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALK-LFDEMPERGVTPDVACYNILIDG 203
Query: 380 YAKRGDIHSTEKIFHRM 396
+ K+GDI + +I+ R+
Sbjct: 204 FFKKGDILNASEIWERL 220
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 142/327 (43%), Gaps = 11/327 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--- 152
Y +L N + A +F+ M+++ + + L+ K + D L
Sbjct: 110 YNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLI---THFGKAGMFDASLFWLQ 166
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME++ V Y LI++ + D + + +K GI PD + +
Sbjct: 167 QMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAK 226
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CM 268
+A+ ++KEM + + LL +Y E K + ++ ++ E+ LD+ C
Sbjct: 227 LFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCN 286
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+L+ +EA+ +F M K + + Y LL+VY + ++ + L + M +
Sbjct: 287 VMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKK 346
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ ++ ++K++ + E EKA + L++ Q +P +Y I+ + K G +
Sbjct: 347 DIEQNVVTYNTMIKVYGKSLEHEKATN-LMQEMQNRGIEPNAITYSTIISIWGKAGKLDR 405
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
+F ++R G +QT++ AY
Sbjct: 406 AAMLFQKLRSSGVEIDQVLYQTMIVAY 432
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 159/375 (42%), Gaps = 46/375 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +++ K + ++A+ ++++ E V Y TLL+ V +A VF M
Sbjct: 215 YNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMN 274
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ P+ CN ++ +Y +LD K AD L M K ++ SY L+ + G++
Sbjct: 275 EAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFG 334
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + K Y EKA +++EM+ ++ + T ++
Sbjct: 335 EAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTII 394
Query: 240 PLYAELGKADQVARIW-KLCESNPWLDVCM------------------------------ 268
++ + GK D+ A ++ KL S +D +
Sbjct: 395 SIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSI 454
Query: 269 ---AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
AI+ + ++EEA VF++ + + ++ +++ ++ + ++ ++M
Sbjct: 455 PRETAIKILARAGRIEEATWVFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKM 514
Query: 326 AESG----CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+G ++ L +A KLH E EKAD++ + Q++ P + ++ Y
Sbjct: 515 RGAGYFPDSNVIALVLNAYGKLH----EFEKADALYKEMQEEECVFPD-EVHFQMLSLYG 569
Query: 382 KRGDIHSTEKIFHRM 396
R D E +F R+
Sbjct: 570 ARKDFMMIEALFERL 584
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 142/375 (37%), Gaps = 46/375 (12%)
Query: 48 EWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLA 101
E ++ DF+ Y+S + + K R + KAE+++++ +P ++ Y L+
Sbjct: 244 EMVQRGIPPDFVT--YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNW----TYNNLIY 297
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKL 160
+ K+A VF M+ + L+ L K K+ DV M +
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
FSY I+++ L M + + M +GI PD T +L K Y + G +KA +
Sbjct: 358 NVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIF 417
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
EM +K T R I A ++ K+
Sbjct: 418 NEMRDHGVKPDVVTYR--------------------------------TVIAALCRIGKM 445
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
++A F +M Y L++ + H L K K+L+ ++ +G H+ + + ++
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSI 505
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ + G V A +I P Y ++MD Y G + ++F M G
Sbjct: 506 INNLCKLGRVMDAQNIF-DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 401 YVARFKQFQTLVQAY 415
+ TLV Y
Sbjct: 565 IEPNDVVYGTLVNGY 579
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 141/344 (40%), Gaps = 18/344 (5%)
Query: 89 SFRGEVVYRTLLANCVAGNNV-------KKAEE----VFNRMKDKGFPVTSFACNQLLIL 137
+F G+++ L N + N++ K+ +E + +R + G F+ + LL
Sbjct: 132 AFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKS 191
Query: 138 YKRLDKKKVADVLLLMEKENVKLTQ---FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE 194
K AD LL M E + +Y +ID + D+ + + M GI
Sbjct: 192 LCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIP 251
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
PD T + + +KAEA L++M + + WT L+ Y+ G+ + R+
Sbjct: 252 PDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Query: 255 WKLCESNPWL-DVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
+K + L DV + + + K K++EA VF M+ + + YT +L YA
Sbjct: 312 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYAT 371
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
L DL M G ++ L+K + G ++KA I+ + + KP
Sbjct: 372 KGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKA-MIIFNEMRDHGVKPDVV 430
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+Y ++ + G + + F++M G + L+Q +
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 133/333 (39%), Gaps = 50/333 (15%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT----SFACNQLLILYKRLDKKKVADVLL 151
Y L+ ++ KA+E+ + + + G + S N L L + +D + + D+ +
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526
Query: 152 LMEKENVKL--TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
NV L T Y +L+D + +V +AM S GIEP+ L Y
Sbjct: 527 -----NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV-ARIWKLCESNPWLDVCM 268
GR ++ ++ +EM +K +++ E G+ + ++ ES ++ C
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 641
Query: 269 AAIEAWG----------------------KLN---------------KVEEAEAVFKRMS 291
I G K+N +VEEA+ +F +S
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASIS 701
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
++ Y+ ++ ++ + +D+ M +GC + +V+ ++ E+
Sbjct: 702 RSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 761
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
+A + L K ++N F + ML++D ++ +G
Sbjct: 762 RAGAYLSKIDERN-FSLEHLTTMLLVDLFSSKG 793
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 134/323 (41%), Gaps = 7/323 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L K+ L+ AE + ++ + E Y L+ + A +
Sbjct: 307 RAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKE 366
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ G +S+ +++L ++ R D +K VL M V+ + Y ++ID G+ N
Sbjct: 367 MEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNC 426
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L M+ EGIEPD T L + GGR ++A + +EM N T +
Sbjct: 427 LGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNI 486
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ L E + V + + P + ++ +G+ + +EA + M
Sbjct: 487 MINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADG 546
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S Y AL+ YA + ++VK M G + ++L+ E V +A
Sbjct: 547 LKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAF 606
Query: 355 SILLKAQQQNKFKPMFSSYMLIM 377
S+ L+ ++N +P +Y +M
Sbjct: 607 SV-LQFMKENDLRPDVITYTTLM 628
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSY 165
N + A + FNRM+++G N L+ +++ + + ++ M + N +Y
Sbjct: 425 NCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTY 484
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 485 NIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKA 544
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEE 282
D LK L+ YA+ G AD + K ++ V + + A+G+ +V E
Sbjct: 545 DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVE 604
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A +V + M + + YT L+K + K + ++M SGC
Sbjct: 605 AFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGC 652
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 132/342 (38%), Gaps = 45/342 (13%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
+K +Y L+ + L +QV++ M G+ PD +T ++L Y GR E A
Sbjct: 302 IKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESAR 361
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAW 274
+LKEME D +K + +L + + G KA V R P I+ +
Sbjct: 362 ILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTF 421
Query: 275 GKLNKVEEAEAVFKRMSK--------TWKKLSTKH------------------------- 301
GK N + A F RM + TW L H
Sbjct: 422 GKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGT 481
Query: 302 --YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ++ + + + + ++ +M E G + + LV ++ G ++A + +
Sbjct: 482 TTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECI-E 540
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + KP + Y +++ YA+RG + MR G A +L+ A+ +
Sbjct: 541 VMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDR 600
Query: 420 --TPAYGIRDRMRADNVFPN----KALAAQVAQVDAFRKTAV 455
A+ + M+ +++ P+ L + +++ F K V
Sbjct: 601 RVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPV 642
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 118/285 (41%), Gaps = 24/285 (8%)
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+++ ++ G PD ++ + L ++ R A+L+ + GD L+E R PL+
Sbjct: 183 RLLALIREHGFLPDLASYSHLLASLLNT-RDPPDAAILERLLGD-LRESRLEPDA--PLF 238
Query: 243 AELGKADQVARI----WKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
++L A A + L S P + A I A G +V EAEA+F
Sbjct: 239 SDLISAFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFL 298
Query: 293 TWK-KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K T+ Y ALLK Y L + ++ +M++ G + LV + G E
Sbjct: 299 AGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWE 358
Query: 352 KADSILLKAQQQNKFKPMFSSYML--IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
A ILLK + + KP SSY+ I+ + RGD + M G +
Sbjct: 359 SA-RILLKEMEADGVKP--SSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYN 415
Query: 410 TLVQAY--INAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRK 452
++ + N A +RMR + + P+ + +DA RK
Sbjct: 416 VMIDTFGKYNCLGHAMDAFNRMREEGIEPD--VVTWNTLIDAHRK 458
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 4/268 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TLL+ C +AE VF M D G + L+ + +L + +KV D+L
Sbjct: 248 VTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGE 307
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M SY +L++ +S + V M++ G P+++T ++L + GR
Sbjct: 308 MASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGR 367
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN--PWLDVCMA 269
+ + EM+ N T +L+ ++ E G +V ++ + E N P ++
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A GK E+A + + M+ S+K YT +++ + + + M E G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ + +L+ GG V+++++IL
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAIL 515
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 128/319 (40%), Gaps = 9/319 (2%)
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K +V M + V + FSY LI+ G++ ++++ MK+E I P T +
Sbjct: 159 KCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVI 218
Query: 205 KHYVSGGRK-EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-- 261
GG E + EM + ++ T LL A G D+ +++
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P L +E +GKL ++E+ + M+ Y LL+ YA + +
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMG 338
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
+ QM +GC + L+ L + G + + L+ + N P ++Y ++++ +
Sbjct: 339 VFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT-DPDAATYNILIEVF 397
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNK 438
+ G +FH M + + ++ ++ A A I M A+++ P+
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 439 ALAAQVAQVDAFRKTAVSE 457
A ++AF + A+ E
Sbjct: 458 --KAYTGVIEAFGQAALYE 474
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/274 (19%), Positives = 111/274 (40%), Gaps = 6/274 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y+ ++ KLR L+K + ++ S Y LL ++K+A VF++M+
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
G + + LL L+ + + V + L M+ N +Y ILI++ G+
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ + M E IEPD T + GG E A +L+ M +++ ++
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 240 PLYAELGKADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ + ++ + SNP ++ + + ++ + V+E+EA+ R+ +
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ + A ++ Y + M +S C
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRC 558
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/400 (19%), Positives = 175/400 (43%), Gaps = 13/400 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVV--YRTLLANCVAGNNVKKAEEVFNRMK 120
Y ++ KL+ QKAES + + +S R + + +L++ ++A +FN M
Sbjct: 755 YTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMM 814
Query: 121 DKGFPVTSFACNQLL---ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
G T + N+LL + RL++ V V+ ++ K+++ S +++D ++ +
Sbjct: 815 RDGPSPTVESINKLLHALCVDGRLEELYV--VVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ ++++ +MK+ G P ++ + G R AE M+ EME N K
Sbjct: 873 IFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 238 LLPLYAELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+L +Y + + +++ ++ ES P I + + + EE ++ ++M
Sbjct: 933 MLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLG 992
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
Y +L+ + K L + + L +++ G + + ++K+ + G KA+
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
LL+ + +P ++ L+M Y+ G+ EK+ ++ + +++ A
Sbjct: 1053 K-LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDA 1111
Query: 415 YINAKTPAYGIRD--RMRADNVFPNKALAAQVAQVDAFRK 452
Y+ +K GI M+ + + P+ + + +F K
Sbjct: 1112 YLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFSK 1151
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/338 (18%), Positives = 143/338 (42%), Gaps = 20/338 (5%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
F G +Y TLL CVA + +A +VF+ ++ G + C ++++Y +L + A
Sbjct: 678 FGGSTMYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETA-- 735
Query: 150 LLLMEKENVKLTQFS----YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
++ + K F+ Y +I+ G+ + VV ++ G PD T L
Sbjct: 736 YQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMS 795
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI--------WKL 257
Y G E+A A+ M D + LL G+ +++ + +K+
Sbjct: 796 AYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKI 855
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
+S+ L ++A+ + + E ++ M + + Y ++++ K +
Sbjct: 856 SKSSILL-----MLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRD 910
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ +V +M E+ + W++++K++ + +K + + ++ +P ++Y ++
Sbjct: 911 AEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESG-LEPDETTYNTLI 969
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Y + + +MR +G + +++L+ A+
Sbjct: 970 IMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAF 1007
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 44/313 (14%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPES-FRGEV-VYRTLLANCVAGNNVKKAEEVFNR 118
R Y ++L+ K + ++ AE + ++ E+ F+ E+ ++ ++L + KK +V+ R
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQR 952
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ--FSYKILIDIKGQSN 176
+K+ G N L+I+Y R D++ L+ + N+ L +YK LI G+
Sbjct: 953 IKESGLEPDETTYNTLIIMYCR-DRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQK 1011
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
L +Q+ E + S+G++ D S + K G KAE +L+ M+ ++ T
Sbjct: 1012 CLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMH 1071
Query: 237 LLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
LL+ Y+ G NP +EAE V + T +
Sbjct: 1072 LLMVSYSSSG--------------NP------------------QEAEKVLSNLKNTEVE 1099
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK---LHVEGGEVEKA 353
L+T Y++++ Y K G + + +M + G W V+ E EV
Sbjct: 1100 LTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEV--- 1156
Query: 354 DSILLKAQQQNKF 366
+LLKA Q F
Sbjct: 1157 -MLLLKALQDIGF 1168
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA---- 270
+A + E+ + C+ ++ +Y +LG + ++ E+ + C
Sbjct: 699 EASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYTDI 758
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
IEA+GKL ++AE+V + ++ + K + +L+ YA+ + + + M G
Sbjct: 759 IEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGP 818
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + L+ G +E+ ++++ Q FK SS +L++D +A+ G+I
Sbjct: 819 SPTVESINKLLHALCVDGRLEEL-YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVN 877
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAK 419
KI+ M+ GY+ + ++ +++ K
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 150/401 (37%), Gaps = 44/401 (10%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKA-ESYIQKIPESFRGEVVYRTLL 100
+AL++ EWL R A+ L ++ + A E + + P VY ++
Sbjct: 173 RALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMM 232
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL---ILYKRLDKKKVADVLLLMEKEN 157
KA+E+ + M+ +G + N L+ + L V ++L ++
Sbjct: 233 GVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRNSG 292
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE-------------------------- 191
++ +Y L+ + ++L G +V E M++
Sbjct: 293 LRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 192 ---------GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
G PD+ T L + EK + + ++M+ + T ++ +Y
Sbjct: 353 RLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 243 AELGKADQVARIWK----LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ G+ D +++K L NP I++ GK N+ EA A+ M K +
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPT 472
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
+ Y+AL+ YA + +D M SG LA+ ++ + + G E KA +L
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA-WVLY 531
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
+ + P S Y L++ K +K M ++
Sbjct: 532 RDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEEL 572
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 149/367 (40%), Gaps = 9/367 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLL 152
V Y ++ + KA +FN M G ++ N L+ Y K D K ++L
Sbjct: 382 VTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAE 441
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ + + F+Y +LI S+DL ++V++ M G++P+ L K YV R
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMA 269
E A +LK M + + + L+ K ++ + + E P A
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I + K +++ AE FK M + + YT L+K + D + K M E G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
A+ A++ + G+ ++A + LK + +F Y ++ + K GDI
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF-LYNSLISGFCKEGDIEKA 680
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPNKALAAQVAQV 447
+++ M G + TL+ + T A + D + ++ P+ + + +
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTI--I 738
Query: 448 DAFRKTA 454
D + K+
Sbjct: 739 DGYCKSG 745
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 129/327 (39%), Gaps = 5/327 (1%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LME 154
Y + V +A EV M +KG L+ + + + K A ++ M
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ +F+Y LID + ++ ++ + M + G++ + T + G
Sbjct: 339 SSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMA 398
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAI 271
KA ++ EM L+ WT LL+ Y ++ KA ++ K + P I
Sbjct: 399 KAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ +++A V +M + K + Y L+K Y +L+K M +G
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
++ L+ +VE+A +L+ ++ KP +Y ++ Y+K G+I E+
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG-IKPNAHTYGAFINLYSKSGEIQVAER 577
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINA 418
F M G V + L++ + +
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDV 604
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 144/361 (39%), Gaps = 12/361 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLL-ANCVAGNNVKKAEEVFNRM 119
Y + ++L +K +Q AE Y + + S V+Y L+ +C GN V+ A F M
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE-ALSTFKCM 617
Query: 120 KDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
+KG A + ++ L K K+ V L K V F Y LI + D+
Sbjct: 618 LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
Q+ + M GI P+ L G KA + E+E +L T +
Sbjct: 678 EKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTI 737
Query: 239 LPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKR-MSKTW 294
+ Y + G + +++ S +P + I+ GK +E+A ++F K+
Sbjct: 738 IDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV 797
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
LS + +L+ + H + + ++L M + + + L+ + + +E+A+
Sbjct: 798 GSLSA--FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAE 855
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ L + +N P +Y ++ Y + G+ +F M G + + A
Sbjct: 856 QLFLDMETRN-IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASA 914
Query: 415 Y 415
Y
Sbjct: 915 Y 915
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 15/282 (5%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKK 144
+P+ F +Y +L++ +++KA ++++ M G N L+ L K +
Sbjct: 658 VPDVF----LYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K ++ +E++++ +Y +ID +S +LT ++ + M S+GI PD IL
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW------KLC 258
G EKA ++ E + ++ L+ + + GK + ++ KL
Sbjct: 774 DGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKL- 831
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
P + I+A+GK +EEAE +F M +T YT+LL Y K
Sbjct: 832 --TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM 889
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
L K M G +A+ + + + G+ +A +L K+
Sbjct: 890 ISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 931
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 112/291 (38%), Gaps = 36/291 (12%)
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
VL MEKE K F+Y I Q+ + +V + M +G+ PD T +L +
Sbjct: 264 VLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFC 322
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM 268
R ++A+ + + M L +R+T Y
Sbjct: 323 KQKRSKEAKLIFESMPSSGLNPNRFT-------YT------------------------- 350
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I+ + K +EEA + M KL+ Y A++ A ++K L +M +
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA 410
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G ++ L+ +++ ++ KA LL + K P +Y +++ D+
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACE-LLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
++ +M + G + TL++AY+ I M A+ V P+
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/405 (20%), Positives = 153/405 (37%), Gaps = 45/405 (11%)
Query: 76 LQKAESYI-QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
LQKA + Q I + V +Y TL+ V + + A E+ M G F N
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 134 LLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+I R K + A +LL+ M ++ +K +Y I++ +S ++ ++ + M S G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
I P++ IL K + G +A + K M L ++ ++ GK +
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 253 RIW--------------------KLCES------------------NPWLDVCMAAIEAW 274
++ C+ NP + V I
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
KL +V +A +F + + Y+ ++ Y L++ L +M G
Sbjct: 707 CKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+ L+ + G +EKA S+ +AQQ++ S++ ++D + K G + ++F
Sbjct: 767 YIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS--LSAFNSLIDSFCKHGKVIEARELFD 824
Query: 395 RMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
M + L+ AY A+ A + M N+ PN
Sbjct: 825 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 869
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 132/326 (40%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A + KA EV M G N ++ Y + K A L
Sbjct: 235 VTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L+D ++ T ++ ++M G++P+ +T L + Y + G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ +L M + + + + +L+ YA+ GK DQ ++ NP
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K +VE+A F++M Y +L+ K K+L+ +M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D Y G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEK-LFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEA 533
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
K+ M VG + TL+ Y
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGY 559
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 20/280 (7%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K ++ A Y Q I E G +VY +L+ + + KA+E+ M
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFD---LMVRIGVKPNIITYSTLIDGYCLAG 528
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T L Y R E A + +EME + T
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 237 LLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
++L + + ++ + ES L++ I G K N +EA +F+ + T
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 294 WKKLSTKHYT----ALLKVYADHKMLSKGKDLVKQMAESG 329
+L T+ + ALLKV + + KDL ++ +G
Sbjct: 649 DLQLETRTFNIMIGALLKVGRN----DEAKDLFAALSANG 684
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 13/194 (6%)
Query: 248 ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
AD+V LC + C A +++ A + K ++ +T LLK
Sbjct: 84 ADEVTP--NLCTYGILIGSCCCA-------GRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134
Query: 308 VYADHKMLSKGKDLV-KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL-LKAQQQNK 365
K S D+V ++M + GC +++ L+K + ++A +L +
Sbjct: 135 GLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD 194
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAY 423
P SY +++ + K GD+ +H M G + + +++ A A+ A
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAM 254
Query: 424 GIRDRMRADNVFPN 437
+ M + V PN
Sbjct: 255 EVLTSMVKNGVMPN 268
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 148/361 (40%), Gaps = 11/361 (3%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
+P+ F +++ L N + K +F + G + + C+ LL + K
Sbjct: 298 VPDGFTYSILFDGLSRN----GDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVS 353
Query: 146 VAD-VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+A+ VL + + T+ Y LI+ Q+ +L G MKS I+PD T L
Sbjct: 354 IAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALI 413
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--- 261
R A+ +L EM+ + + T L+ Y G+ ++ + + N
Sbjct: 414 NGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 473
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P + + + A+ K K+ EA A+ M + + Y A++ Y +H + L
Sbjct: 474 PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFIL 533
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
V++M +G + ++ L+K ++ +A+ I + + ++ P SY ++
Sbjct: 534 VEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEI-INSLSNHRLIPDAVSYNTLISACC 592
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKA 439
RG+I + RM + G + + + L+ A + +M +NV P+ A
Sbjct: 593 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNA 652
Query: 440 L 440
+
Sbjct: 653 I 653
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 5/309 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V+Y TL+ ++ A F +MK + N L+ L K D+L+
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLME 431
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ V T ++ LID G++ L V+ M+ G++P+ + + + G+
Sbjct: 432 MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
+A A+L +M ++ + ++ Y E G DQ + + +SN P +
Sbjct: 492 IPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNL 551
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +++ EAE + +S Y L+ + K DL ++M + G
Sbjct: 552 LIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ L+ G + + + L + QN P + + ++++ Y+K G+
Sbjct: 612 IKSTVRTYHQLISGLGGAGRLIEME-YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA 670
Query: 390 EKIFHRMRQ 398
E + M Q
Sbjct: 671 EDLRKEMLQ 679
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 20/263 (7%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y LI + + + M GI PD ST + GG E++E +L EM
Sbjct: 316 TYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEM 375
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNK---- 279
+ K + T LL YA GK ++ R+ L E ++C IE L K
Sbjct: 376 QDGMCKPNELTHCSLLHAYAN-GK--EIGRMLALAE-----EICSGVIEPHAVLLKTLVL 427
Query: 280 -------VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
+ EAE F + + A++ +Y +M++K +++ M ESG
Sbjct: 428 VNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTP 487
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+++L+ +H + E+++ +L K KP SY ++ Y + G + I
Sbjct: 488 SLATYNSLMYMHSQSENFERSEEVL-KEILAKGIKPDIISYNTVIFAYCRNGRMKEASHI 546
Query: 393 FHRMRQVGYVARFKQFQTLVQAY 415
F MR+ G + + T V +Y
Sbjct: 547 FSEMRESGLIPDVITYNTFVASY 569
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 124/298 (41%), Gaps = 5/298 (1%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLL 151
E Y TL+ C G+ ++A VF MK GF N LL +Y + + K+ +VL
Sbjct: 104 EYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLR 163
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME + +Y LI + L ++ M GI+ D T + +V G
Sbjct: 164 EMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTG 223
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCM 268
+ E A + +EM K + T L+ ++ GK ++ +++ K+C P +
Sbjct: 224 KDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWN 283
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ +G+ E VFK M + Y L+ Y+ + + K+M ++
Sbjct: 284 TLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDT 343
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
G ++A++ GG E+++ IL + Q KP ++ ++ YA +I
Sbjct: 344 GITPDLSTYNAVLAALARGGLWEQSEKILAE-MQDGMCKPNELTHCSLLHAYANGKEI 400
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 122/312 (39%), Gaps = 41/312 (13%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKI 167
V A + N + GF +A L+ + + A ++ ME+E K T +Y +
Sbjct: 14 VSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNV 73
Query: 168 LIDIKGQS----NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
++++ G+ N +TG+ E MK+ GI PD T L G E+A A+ ++M
Sbjct: 74 ILNVYGKMGMPWNKITGL---FEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDM 130
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
+ + T N LDV +GK +++EA
Sbjct: 131 KSMGFVPDKVT-------------------------YNTLLDV-------YGKSRRIKEA 158
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
V + M S Y +L+ YA +L + +L QM E G + + A++
Sbjct: 159 IEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSG 218
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
V G+ E A + + + KP ++ ++ + RG K+F ++ V
Sbjct: 219 FVRTGKDESAMRV-FEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVP 277
Query: 404 RFKQFQTLVQAY 415
+ TL+ +
Sbjct: 278 DIVTWNTLLAVF 289
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 115/256 (44%), Gaps = 7/256 (2%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I++ G+ ++ ++ + +G EPD L VS GR +A + K+ME +
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 227 NLKEHRWTCRLLLPLYAELGKA-DQVARIWKLCESNPWLD---VCMAAIEAWGKLNKVEE 282
K T ++L +Y ++G +++ +++ ++ L I + + EE
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A AVF+ M Y LL VY + + + +++++M +GC + +++L+
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182
Query: 343 LHVEGGEVEKADSILLKAQQ-QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G +E+A + LK Q + K +Y ++ + + G S ++F MR G
Sbjct: 183 AYARDGLLEEA--MELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGC 240
Query: 402 VARFKQFQTLVQAYIN 417
F L++ + N
Sbjct: 241 KPNICTFNALIKMHGN 256
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILI 169
+AE F +K KGF N ++ +Y R K ++L M++ + +Y L+
Sbjct: 437 EAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLM 496
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
+ QS + ++V++ + ++GI+PD + + Y GR ++A + EM L
Sbjct: 497 YMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLI 556
Query: 230 EHRWTCRLLLPLYA 243
T + YA
Sbjct: 557 PDVITYNTFVASYA 570
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 133/306 (43%), Gaps = 5/306 (1%)
Query: 114 EVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIK 172
E+ M G N +L + KR + V VL M+ V+L++ +Y LI
Sbjct: 412 EMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAY 471
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
G+ T ++ + M S G P +T L G A++++ +M + K +
Sbjct: 472 GRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPND 531
Query: 233 WTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
+ LLL YA+ G A + I K + P + + A K ++E E F+
Sbjct: 532 QSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQE 591
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ K + ++L +YA + + SK ++ + +SG + +++L+ ++ + E
Sbjct: 592 VKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNE 651
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+A+ I LK + ++ KP SY +++ + K+G I ++I M G +
Sbjct: 652 SWEAEKI-LKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYH 710
Query: 410 TLVQAY 415
TLV Y
Sbjct: 711 TLVGGY 716
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/466 (18%), Positives = 175/466 (37%), Gaps = 54/466 (11%)
Query: 20 NDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKA 79
++L R+++ + L + AL L W D A+ L+++ + G +
Sbjct: 106 DELLRSDLPSLLKALELSGHWEWALALLRWASDEGAAD------AAALEMVVRALGREGQ 159
Query: 80 ESYI------QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
+ +P R +V Y T+L ++A ++F ++ +G T N
Sbjct: 160 HDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYN 219
Query: 133 QLLILYKRLDKK--KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
+L +Y R+ + ++ +L M V+ F+ +I G+ L E +K+
Sbjct: 220 VVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA 279
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
G P T L + + G +A +LKEME + T L YA G ++
Sbjct: 280 RGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEE 339
Query: 251 VARIWKLCESNPWLDVCMA---AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
A+ S L + A+ + +V+EA A+F RM K + Y +
Sbjct: 340 AAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFG 399
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL---------L 358
+ + +++++M+ SGC + W+ ++ + + G + +L L
Sbjct: 400 MLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVEL 459
Query: 359 KAQQQNK-------------------------FKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
N F P ++Y +++ +++GD + + I
Sbjct: 460 SRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIV 519
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAKTPA--YGIRDRMRADNVFPN 437
+M + G+ + + L+Q Y A I + +FP+
Sbjct: 520 SKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPS 565
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 80 ESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY- 138
E Y+ I F V+ RTL+ ++ E+ F +K +G+ N +L +Y
Sbjct: 556 EVYVGTI---FPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 139 KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSS 198
K K ++ +++ + +Y L+D+ +SN+ +++++ +KS ++PD
Sbjct: 613 KNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVV 672
Query: 199 TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ + + G ++A+ +L EM D + T L+ YA L
Sbjct: 673 SYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASL 719
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 103/240 (42%), Gaps = 8/240 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+VY TL+ N+++ AE +F MK KG + N L+ Y R + K+ + LL
Sbjct: 356 IVYNTLMDAFCKSNHIEAAEGLFVEMKAKGIKPIAATYNILMHAYSRRMQPKIVEKLLEE 415
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGM---DQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M+ +K SY LI G+ +++ M D ++ MK G++P S + L Y
Sbjct: 416 MQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLK-MKKVGVKPTSQSYTALIHAYSV 474
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
G EKA A + M+ + +K T LL + G A + IWKL S
Sbjct: 475 SGLHEKAYAAFENMQNEGIKPSIETYTTLLNAFRHAGDAQTLMEIWKLMISEKVEGTGAT 534
Query: 270 ---AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
++ + K EA V K K + Y L+ YA SK L+K+MA
Sbjct: 535 FNILVDGFAKQGLFMEAREVISEFGKVGLKPTVVTYNMLINAYARGGQHSKLPQLLKEMA 594
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 127/311 (40%), Gaps = 32/311 (10%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFS 164
G++ K A + F +M KG + L+ + ++ A ++ MEK+ V +
Sbjct: 298 GHSAKDAWQFFEKMNRKGVRWSEEVLGALINSFCVEGLRRQALIIQSEMEKKGVSSSAIV 357
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y L+D +SN + + + MK++GI+P ++T IL Y + + E +L+EM+
Sbjct: 358 YNTLMDAFCKSNHIEAAEGLFVEMKAKGIKPIAATYNILMHAYSRRMQPKIVEKLLEEMQ 417
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAE 284
LK + + L+ Y GK ++ MAA +A
Sbjct: 418 DVGLKPNATSYTCLIIAY---GKQKNMSD--------------MAAADA----------- 449
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
F +M K K +++ YTAL+ Y+ + K + M G + L+
Sbjct: 450 --FLKMKKVGVKPTSQSYTALIHAYSVSGLHEKAYAAFENMQNEGIKPSIETYTTLLNAF 507
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
G+ + I K K + +++ +++D +AK+G ++ +VG
Sbjct: 508 RHAGDAQTLMEI-WKLMISEKVEGTGATFNILVDGFAKQGLFMEAREVISEFGKVGLKPT 566
Query: 405 FKQFQTLVQAY 415
+ L+ AY
Sbjct: 567 VVTYNMLINAY 577
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 87/208 (41%), Gaps = 32/208 (15%)
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC 267
+S GR E A + + ME +N+ TC +++ + ELG
Sbjct: 260 LSSGRSEDAWKVYESMETENIHPDHMTCSIMVTVMRELGH-------------------- 299
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+A +AW F++M++ + S + AL+ + + + + +M +
Sbjct: 300 -SAKDAW----------QFFEKMNRKGVRWSEEVLGALINSFCVEGLRRQALIIQSEMEK 348
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G + ++ L+ + +E A+ + ++ + + KP+ ++Y ++M Y++R
Sbjct: 349 KGVSSSAIVYNTLMDAFCKSNHIEAAEGLFVEMKAKG-IKPIAATYNILMHAYSRRMQPK 407
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAY 415
EK+ M+ VG + L+ AY
Sbjct: 408 IVEKLLEEMQDVGLKPNATSYTCLIIAY 435
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 133/306 (43%), Gaps = 5/306 (1%)
Query: 114 EVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIK 172
E+ M G N +L + KR + V VL M+ V+L++ +Y LI
Sbjct: 321 EMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAY 380
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
G+ T ++ + M S G P +T L G A++++ +M + K +
Sbjct: 381 GRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPND 440
Query: 233 WTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
+ LLL YA+ G A + I K + P + + A K ++E E F+
Sbjct: 441 QSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQE 500
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ K + ++L +YA + + SK ++ + +SG + +++L+ ++ + E
Sbjct: 501 VKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNE 560
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+A+ I LK + ++ KP SY +++ + K+G I ++I M G +
Sbjct: 561 SWEAEKI-LKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYH 619
Query: 410 TLVQAY 415
TLV Y
Sbjct: 620 TLVGGY 625
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/443 (18%), Positives = 165/443 (37%), Gaps = 54/443 (12%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYI------QKIPESFRGEV-V 95
AL L W D A+ L+++ + G + + +P R +V
Sbjct: 38 ALALLRWASDEGAAD------AAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRA 91
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK--KVADVLLLM 153
Y T+L ++A ++F ++ +G T N +L +Y R+ + ++ +L M
Sbjct: 92 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 151
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
V+ F+ +I G+ L E +K+ G P T L + + G
Sbjct: 152 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNY 211
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA---A 270
+A +LKEME + T L YA G ++ A+ S L
Sbjct: 212 TEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTV 271
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ A+ + +V+EA A+F RM K + Y + + + +++++M+ SGC
Sbjct: 272 MTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGC 331
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSIL---------LKAQQQNK---------------- 365
+ W+ ++ + + G + +L L N
Sbjct: 332 TPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFK 391
Query: 366 ---------FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
F P ++Y +++ +++GD + + I +M + G+ + + L+Q Y
Sbjct: 392 MYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYA 451
Query: 417 NAKTPA--YGIRDRMRADNVFPN 437
A I + +FP+
Sbjct: 452 KGGNAAGIESIEKEVYVGTIFPS 474
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 80 ESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY- 138
E Y+ I F V+ RTL+ ++ E+ F +K +G+ N +L +Y
Sbjct: 465 EVYVGTI---FPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 521
Query: 139 KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSS 198
K K ++ +++ + +Y L+D+ +SN+ +++++ +KS ++PD
Sbjct: 522 KNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVV 581
Query: 199 TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ + + G ++A+ +L EM D + T L+ YA L
Sbjct: 582 SYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASL 628
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 135/313 (43%), Gaps = 14/313 (4%)
Query: 135 LILYKRLDK-KKVADVLLLMEKENV-KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ +K+L K V+++L + +N ++ + +LI G+ + G ++V+ + G
Sbjct: 110 LVRFKQLKKWNLVSEILEWLRYQNWWNFSEMDFLMLITAYGKLGNFNGAERVLSVLSKMG 169
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
P+ + L + Y GG+ AEA+ + M+ + T +++L + E K +
Sbjct: 170 SSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEGDKFKEAE 229
Query: 253 RIW------KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
++ K P + I + K ++A VF M ST Y +L+
Sbjct: 230 EVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLM 289
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
++K +SK D QM SG +++ L+K + E+A S+ +
Sbjct: 290 SFETNYKEVSKIYD---QMQRSGIQPDVVSYALLIKAYGRARREEEALSV-FEEMLDAGV 345
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYG 424
+P +Y +++D +A G + + +F MR+ + T++ AY+NA A
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK 405
Query: 425 IRDRMRADNVFPN 437
R++ D PN
Sbjct: 406 FFKRIKVDGFEPN 418
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 165/416 (39%), Gaps = 51/416 (12%)
Query: 12 LTKYAEEGND-LSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLI 70
L +Y +G+ L R + + + + + ++ EWL +F E D+ +
Sbjct: 90 LRQYRTDGDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEMDFLMLITAY 149
Query: 71 AKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTS 128
KL AE + + + S + Y L+ + G AE +F RM+ G P S
Sbjct: 150 GKLGNFNGAERVLSVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG-PEPS 208
Query: 129 FACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM 188
Q+++ +E + K + ++ L+D
Sbjct: 209 AVTYQIILK-------------TFVEGDKFKEAEEVFETLLD-----------------E 238
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL---YAEL 245
K ++PD ++ Y G +KA + M G + + T L+ Y E+
Sbjct: 239 KKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQSTVTYNSLMSFETNYKEV 298
Query: 246 GKA-DQVARIWKLCESNPWLDVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
K DQ+ R S DV A I+A+G+ + EEA +VF+ M + + K Y
Sbjct: 299 SKIYDQMQR------SGIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
LL +A M+ + K + K M ++ ++ +V ++E A+ K +
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEK-FFKRIK 411
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ F+P +Y ++ YAK D+ +++ +MR G K QT++ ++A
Sbjct: 412 VDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSG----IKANQTILTTIMDA 463
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 103/243 (42%), Gaps = 14/243 (5%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP--VTSFACNQLLILYKRLDK 143
+P+S V Y +L++ N K+ +++++M+ G V S+A L+ Y R +
Sbjct: 278 VPQS---TVTYNSLMS---FETNYKEVSKIYDQMQRSGIQPDVVSYAL--LIKAYGRARR 329
Query: 144 KKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
++ A V M V+ T +Y IL+D S + V ++M+ + I PD +
Sbjct: 330 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 389
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCE 259
+ YV+ E AE K ++ D + + T ++ YA+ +++ ++ +L
Sbjct: 390 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSG 449
Query: 260 SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
+ ++A G+ A +K M K LL +Y+ L + K
Sbjct: 450 IKANQTILTTIMDASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSLYSTQDELDEAK 509
Query: 320 DLV 322
+L
Sbjct: 510 ELT 512
>gi|357444885|ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481768|gb|AES62971.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 553
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 136/324 (41%), Gaps = 41/324 (12%)
Query: 135 LILYKRLDK-KKVADVLLLMEKENV-KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ +K+L K VA++L + +N + + +LI G+ D G ++V+ M G
Sbjct: 111 LMRFKQLKKWNLVAEILEWLRAQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNG 170
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
P+ +Q L + Y GGR AEA+ + M+ + +T +++L + + K +
Sbjct: 171 YAPNVVSQTALMEAYGKGGRYNNAEAIFRRMQTFGPEPSAFTYQIILKTFVQGNKFKEAE 230
Query: 253 RIW-KLCESN-----PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
++ KL P + I + K E+A F M++ K +T Y +L+
Sbjct: 231 EVFDKLLNDEKSPLRPDQKMFNMMIYMYKKSGSHEKARQTFALMAERGIKKATVTYNSLM 290
Query: 307 KVYADHKMLSKGKD--------------------------------LVKQMAESGCHIGP 334
++K +S D + ++M ++G
Sbjct: 291 SFETNYKEVSNIYDQMQRADLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTR 350
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
A++ L+ G VE+A I+ K+ +++K+ P SY ++ Y D+ EK F
Sbjct: 351 KAYNILLDAFSISGMVEQA-RIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFFK 409
Query: 395 RMRQVGYVARFKQFQTLVQAYINA 418
R+ Q G+ + TL++ Y A
Sbjct: 410 RLIQDGFEPNVVTYGTLIKGYAKA 433
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 128/318 (40%), Gaps = 52/318 (16%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRM-KDKGFPV--TSFACNQLLILYKRL-D 142
P +F Y+ +L V GN K+AEEVF+++ D+ P+ N ++ +YK+
Sbjct: 208 PSAF----TYQIILKTFVQGNKFKEAEEVFDKLLNDEKSPLRPDQKMFNMMIYMYKKSGS 263
Query: 143 KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
+K LM + +K +Y L+ + +++ + + M+ + PD + A+
Sbjct: 264 HEKARQTFALMAERGIKKATVTYNSLMSFETNYKEVS---NIYDQMQRADLRPDVVSYAL 320
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
L Y R+E+A A+ +EM ++ R +LL ++ G
Sbjct: 321 LINAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGM--------------- 365
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
VE+A VFK M + YT +L Y + + +
Sbjct: 366 -----------------VEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAEKFF 408
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKA----DSILLKAQQQNKFKPMFSSYMLIMD 378
K++ + G + + L+K + + ++EK + +L + + N+ + IMD
Sbjct: 409 KRLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEMLGRGIKANQ-----TILTTIMD 463
Query: 379 QYAKRGDIHSTEKIFHRM 396
+ K GD S F M
Sbjct: 464 AHGKNGDFDSAVNWFKEM 481
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 142/378 (37%), Gaps = 44/378 (11%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLANC 103
++ EWL DF + D+ + KL AE + + ++ + VV +T L
Sbjct: 125 EILEWLRAQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVVSQTALMEA 184
Query: 104 VA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ 162
G AE +F RM+ G P S
Sbjct: 185 YGKGGRYNNAEAIFRRMQTFG-PEPS---------------------------------A 210
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSE---GIEPDSSTQAILAKHYVSGGRKEKAEAM 219
F+Y+I++ Q N ++V + + ++ + PD ++ Y G EKA
Sbjct: 211 FTYQIILKTFVQGNKFKEAEEVFDKLLNDEKSPLRPDQKMFNMMIYMYKKSGSHEKARQT 270
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA--IEAWGKL 277
M +K+ T L+ + + + + P DV A I A+GK
Sbjct: 271 FALMAERGIKKATVTYNSLMSFETNYKEVSNIYDQMQRADLRP--DVVSYALLINAYGKA 328
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+ EEA AVF+ M + + K Y LL ++ M+ + + + K M ++
Sbjct: 329 RREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQARIVFKSMRRDKYMPDLCSY 388
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
++ +V ++E A+ K Q+ F+P +Y ++ YAK DI + + M
Sbjct: 389 TTMLSAYVNAPDMEGAEK-FFKRLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEML 447
Query: 398 QVGYVARFKQFQTLVQAY 415
G A T++ A+
Sbjct: 448 GRGIKANQTILTTIMDAH 465
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 155/381 (40%), Gaps = 42/381 (11%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK----IP-ESFRGEV-V 95
+A+ L EWL N + D + ++L+A++ G + S K IP + + +V
Sbjct: 153 RAILLFEWLVLNLGTGNVNLDNQA-VELMARILGRESQHSIASKLFDVIPLDDYSLDVRA 211
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK--KKVADVLLLM 153
Y T+L + ++A +F +M + G T N +L +Y ++ + K+ +L M
Sbjct: 212 YTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEM 271
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ + +F+ +I G+ L + +KS+G P + T L + + G
Sbjct: 272 RSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIY 331
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
+A +++KEME +N T Y EL + A
Sbjct: 332 SEALSIMKEMEDNNCPPDAVT-------YNEL-------------------------VAA 359
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ + EE A+ M++ K + YT ++ Y + K L QM ESGC
Sbjct: 360 YVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPN 419
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++A++ + + + E+ IL + + P ++ ++ +G +++F
Sbjct: 420 VCTYNAILGMLGKKSQSEEMMKILCD-MKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVF 478
Query: 394 HRMRQVGYVARFKQFQTLVQA 414
M+ G+ F TL+ A
Sbjct: 479 QEMKSCGFEPDRDTFNTLITA 499
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 130/332 (39%), Gaps = 13/332 (3%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL 151
G V Y LL +A + M+D P + N+L+ Y R + L+
Sbjct: 314 GTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALI 373
Query: 152 -LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST-QAILAKHYVS 209
M + +K +Y +I+ G++ + + + MK G P+ T AIL
Sbjct: 374 DTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGML--- 430
Query: 210 GGRKEKAEAMLK---EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPW 263
G+K ++E M+K +M+ D +R T +L + G V R++ K C P
Sbjct: 431 -GKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPD 489
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
D I A G+ +AE ++ M + S Y ALL A + ++K
Sbjct: 490 RDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIK 549
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
M G ++ ++ + +GG V+ + I + F LI+ + R
Sbjct: 550 DMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCR 609
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ E+ F +++ GY F +++ +
Sbjct: 610 A-LAGMERAFQALQKHGYKPDLVVFNSMLSMF 640
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 121/274 (44%), Gaps = 13/274 (4%)
Query: 131 CNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
C + ++L++ L +L + NV L + +++ I G+ + + ++ + +
Sbjct: 151 CERAILLFEWL--------VLNLGTGNVNLDNQAVELMARILGRESQHSIASKLFDVIPL 202
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA-- 248
+ D + Y G+ E+A A+ ++M L T ++L +Y ++G++
Sbjct: 203 DDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWN 262
Query: 249 DQVARIWKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+ + ++ D C I A G+ ++EA+ F + T Y ALL
Sbjct: 263 KILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALL 322
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
+V+ + S+ ++K+M ++ C + ++ LV +V G E+ + L+ +N
Sbjct: 323 QVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEG-AALIDTMTENGI 381
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
KP +Y +++ Y + + ++ +M++ G
Sbjct: 382 KPNAVTYTTMINAYGRAAQVDKALSLYDQMKESG 415
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 139/363 (38%), Gaps = 44/363 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
V Y T++ V KA ++++MK+ G N +L +L K+ +++ +L
Sbjct: 386 VTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCD 445
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG-- 210
M+ + + ++ ++ + G + +V + MKS G EPD T L SG
Sbjct: 446 MKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLIT--ASGRC 503
Query: 211 -----------------------------------GRKEKAEAMLKEMEGDNLKEHRWTC 235
G AE+++K+M+ K +
Sbjct: 504 GSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSY 563
Query: 236 RLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
L+L YA+ G + RI K P + I A K + E F+ + K
Sbjct: 564 SLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQK 623
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
K + ++L +++ M + +++ + E G + +++L+ L+ GGE K
Sbjct: 624 HGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWK 683
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
A+ IL + Q K SY ++ + ++G +H + M G + T V
Sbjct: 684 AEEILRELQNSGD-KSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFV 742
Query: 413 QAY 415
Y
Sbjct: 743 GGY 745
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 157/375 (41%), Gaps = 28/375 (7%)
Query: 76 LQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL 135
Q AESY + +P G + + L + C + +++ A V ++ C
Sbjct: 120 FQLAESY-RVVP----GPLWHSLLKSLCTSSSSIGLAYAVVLWLQKHNL------CFSYE 168
Query: 136 ILYKRL-----DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
+LY L +K+ + LL +++N LT +Y LI ++NDL ++ M+
Sbjct: 169 LLYSILIHALGQSEKLYEAFLLSQRQN--LTPLTYNALISACARNNDLEKALNLITRMRQ 226
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKA--EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+G D +++ + + R + A + + +E+E D L+ ++ +A+ G
Sbjct: 227 DGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDL 286
Query: 249 DQVARIWKLCESNPWLDV----CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
+ + + + L V +A I A G + EAEA+F+ M K T+ Y A
Sbjct: 287 SKALEFLGVVQGS-GLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNA 345
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
LL+ Y +L + +V +M SG + L+ + G E A I+LK + +
Sbjct: 346 LLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESA-RIVLKEMEAS 404
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPA 422
+P + I+ Y +G+ + ++ M G + ++ + N A
Sbjct: 405 NVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHA 464
Query: 423 YGIRDRMRADNVFPN 437
DRM ++ + P+
Sbjct: 465 MATFDRMLSEGIEPD 479
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 131/320 (40%), Gaps = 8/320 (2%)
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLLLMEKENV 158
L NC G V+ AE +F M+D G + A N LL Y + K A+ V+ ME+ V
Sbjct: 315 LGNC--GRTVE-AEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGV 371
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+ +Y LID G + V++ M++ ++P++ + + Y G +K+
Sbjct: 372 SPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQ 431
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK--LCES-NPWLDVCMAAIEAWG 275
+L+EME ++ R +++ + + D + L E P I+
Sbjct: 432 VLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHC 491
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
+ K + AE +F+ M + + ++ + D + K+L+ M G +
Sbjct: 492 RAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSV 551
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
+ L+ ++ + G A L + KP + Y +++ YA+RG F
Sbjct: 552 TYTTLIDIYGKSGRFNDAIECL-DDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRA 610
Query: 396 MRQVGYVARFKQFQTLVQAY 415
MR G +L+ A+
Sbjct: 611 MRVDGLKPSLLALNSLINAF 630
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 4/237 (1%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K VL ME V+ + Y ++ID G+ N L + M SEGIEPD+ T L
Sbjct: 427 QKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTL 486
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-- 261
+ G+ ++AE + +EM T +++ + + + D V + S
Sbjct: 487 IDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGL 546
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P I+ +GK + +A M K S+ Y AL+ YA + +
Sbjct: 547 VPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVS 606
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ M G LA ++L+ E +A ++ L+ ++N KP +Y +M
Sbjct: 607 AFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTV-LQYMKENDLKPDVVTYTTLM 662
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 99/242 (40%), Gaps = 6/242 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-- 151
V Y ++ N + A F+RM +G + N L+ + R K A+ L
Sbjct: 446 VFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEE 505
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ME ++ I+I+ G + ++ M+S+G+ P+S T L Y G
Sbjct: 506 MMEG-GYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSG 564
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
R A L +M+ LK L+ YA+ G ++Q ++ + P L
Sbjct: 565 RFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALN 624
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ I A+G+ + EA V + M + K YT L+K + K + ++M S
Sbjct: 625 SLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILS 684
Query: 329 GC 330
GC
Sbjct: 685 GC 686
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 135/323 (41%), Gaps = 13/323 (4%)
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENV 158
L+N G ++ A VF + G + + N +L L +L K K A LL+ ME
Sbjct: 226 LSNSFDG--IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGN 283
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
SY +++D Q L + +++E ++ +G++P+ T + GR +AE
Sbjct: 284 VPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQ 343
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN------PWLDVCMAAIE 272
+L+ M+ + L+ + GK+ V+ +KL + P + I
Sbjct: 344 VLRVMKNQRIFPDNVVYTTLI---SGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIH 400
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
+ KV EA +F M K YTAL+ Y + + L QM E G
Sbjct: 401 GLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTP 460
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ + ALV + GEV+ A+ LL + +P +Y +++ K G+I K+
Sbjct: 461 NVVTYTALVDGLCKCGEVDIANE-LLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKL 519
Query: 393 FHRMRQVGYVARFKQFQTLVQAY 415
M G+ + T++ AY
Sbjct: 520 MEEMDLAGFFPDTITYTTIMDAY 542
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 162/416 (38%), Gaps = 41/416 (9%)
Query: 9 HSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLD 68
HS L + GN ++ + GK L+L E L+ K L + Y S +
Sbjct: 272 HSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQ-RKGLKPNQYTYNSIIS 330
Query: 69 LIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+ K + +AE ++ + F VVY TL++ NV ++F+ MK
Sbjct: 331 FLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMK------ 384
Query: 127 TSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVE 186
KK V D + +Y +I Q+ + ++
Sbjct: 385 ---------------RKKIVPDFV-------------TYTSMIHGLCQAGKVVEARKLFS 416
Query: 187 AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
M S+G++PD T L Y G ++A ++ +M L + T L+ + G
Sbjct: 417 EMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCG 476
Query: 247 KADQVARIW-KLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
+ D + ++ E +VC A I K+ +E+A + + M T YT
Sbjct: 477 EVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYT 536
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
++ Y ++K +L++ M + G + ++ L+ G +E + L+K
Sbjct: 537 TIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGER-LIKWMLD 595
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
P +++ +M QY R ++ +T +I+ M G V + L++ + A+
Sbjct: 596 KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKAR 651
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 130/323 (40%), Gaps = 5/323 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
V Y +++ V +A ++F+ M KG L+ Y + + K A L
Sbjct: 393 VTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQ 452
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M ++ + +Y L+D + ++ ++++ M +G++P+ T L G
Sbjct: 453 MVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGN 512
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMA 269
E+A +++EM+ T ++ Y ++G KA ++ RI P +
Sbjct: 513 IEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNV 572
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ + +E+ E + K M + + +L+K Y + ++ K M G
Sbjct: 573 LMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQG 632
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
++ L+K H + +++A L K + F +SY ++ + KR
Sbjct: 633 VVPDTNTYNILIKGHCKARNMKEA-WFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEA 691
Query: 390 EKIFHRMRQVGYVARFKQFQTLV 412
K+F MR G++A + + V
Sbjct: 692 RKLFEEMRTHGFIAEKEIYDIFV 714
>gi|297844926|ref|XP_002890344.1| F18O14.27 [Arabidopsis lyrata subsp. lyrata]
gi|297336186|gb|EFH66603.1| F18O14.27 [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
L+ + +S +L + E +KS G+ D + YV+ G+ + E ++KEM+
Sbjct: 427 LVHMYSKSGNLERATEAFENLKSYGLRLDEKIYEAMIMGYVNAGKPKLGERLVKEMQAKE 486
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWK--LCESNPWLDVCMAA--IEAWGKLNKVEEA 283
LK LL YA++G A+ A I L SN L + +EA+GK +V++A
Sbjct: 487 LKASEEVYMALLRAYAQMGDANGAAGISSSMLYASNDPLSFEAYSLFVEAYGKAGQVDKA 546
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
++ F M K K K L++ Y L K L+ Q+ + G IG + + LV
Sbjct: 547 KSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDW 606
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPM 369
G +E+A+ +L+K Q + P
Sbjct: 607 MANLGLIEEAEQLLVKISQLGEAPPF 632
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 3/181 (1%)
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ ++A+ + V RI K N P + + + + K +E A F+ +
Sbjct: 392 LIHIHAKENHIEDVERILKKMSQNGIFPDILTATSLVHMYSKSGNLERATEAFENLKSYG 451
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+L K Y A++ Y + G+ LVK+M + AL++ + + G+ A
Sbjct: 452 LRLDEKIYEAMIMGYVNAGKPKLGERLVKEMQAKELKASEEVYMALLRAYAQMGDANGAA 511
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
I + F +Y L ++ Y K G + + F MR++G+ K LV+A
Sbjct: 512 GISSSMLYASNDPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRA 571
Query: 415 Y 415
Y
Sbjct: 572 Y 572
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ L+ +H + +E + IL K Q F + ++ L+ Y+K G++ + F +
Sbjct: 389 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATSLV-HMYSKSGNLERATEAFENL 447
Query: 397 RQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+ G K ++ ++ Y+NA P G R
Sbjct: 448 KSYGLRLDEKIYEAMIMGYVNAGKPKLGER 477
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 133/306 (43%), Gaps = 5/306 (1%)
Query: 114 EVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIK 172
E+ M G N +L + KR + V VL M+ V+L++ +Y LI
Sbjct: 412 EMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAY 471
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
G+ T ++ + M S G P +T L G A++++ +M + K +
Sbjct: 472 GRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPND 531
Query: 233 WTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
+ LLL YA+ G A + I K + P + + A K ++E E F+
Sbjct: 532 QSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQE 591
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ K + ++L +YA + + SK ++ + +SG + +++L+ ++ + E
Sbjct: 592 VKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNE 651
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+A+ I LK + ++ KP SY +++ + K+G I ++I M G +
Sbjct: 652 SWEAEKI-LKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYH 710
Query: 410 TLVQAY 415
TLV Y
Sbjct: 711 TLVGGY 716
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/466 (18%), Positives = 175/466 (37%), Gaps = 54/466 (11%)
Query: 20 NDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKA 79
++L R+++ + L + AL L W D A+ L+++ + G +
Sbjct: 106 DELLRSDLPSLLKALELSGHWEWALALLRWASDEGAAD------AAALEMVVRALGREGQ 159
Query: 80 ESYI------QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
+ +P R +V Y T+L ++A ++F ++ +G T N
Sbjct: 160 HDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYN 219
Query: 133 QLLILYKRLDKK--KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
+L +Y R+ + ++ +L M V+ F+ +I G+ L E +K+
Sbjct: 220 VVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKA 279
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
G P T L + + G +A +LKEME + T L YA G ++
Sbjct: 280 RGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEE 339
Query: 251 VARIWKLCESNPWLDVCMA---AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
A+ S L + A+ + +V+EA A+F RM K + Y +
Sbjct: 340 AAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFG 399
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL---------L 358
+ + +++++M+ SGC + W+ ++ + + G + +L L
Sbjct: 400 MLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVEL 459
Query: 359 KAQQQNK-------------------------FKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
N F P ++Y +++ +++GD + + I
Sbjct: 460 SRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIV 519
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAKTPA--YGIRDRMRADNVFPN 437
+M + G+ + + L+Q Y A I + +FP+
Sbjct: 520 SKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPS 565
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 80 ESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY- 138
E Y+ I F V+ RTL+ ++ E+ F +K +G+ N +L +Y
Sbjct: 556 EVYVGTI---FPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Query: 139 KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSS 198
K K ++ +++ + +Y L+D+ +SN+ +++++ +KS ++PD
Sbjct: 613 KNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVV 672
Query: 199 TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ + + G ++A+ +L EM D + T L+ YA L
Sbjct: 673 SYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASL 719
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 151/360 (41%), Gaps = 9/360 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLL-ANCVAGNNVKKAEEVFNRM 119
+ C+ ++ + + +A +++ + G V Y L+ A C AG ++ A+E+F +M
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ-LENAKELFVKM 323
Query: 120 KDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
K G LL + D + ME + ++ IL+D+ ++ D
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+ M+ +GI P+ T L + GR E A +L ME ++ +T +
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443
Query: 239 LPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ + E GKA + K P + C A++ + ++ ++ EA+ +F + +
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ Y ++K Y+ + + +L+ +M +GC + ++L+ + G V++A
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + + K P +Y ++ K G + ++F M + F TL+ +
Sbjct: 564 MFDRMKDM-KLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 6/262 (2%)
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M V E M+ + I D T + K G + +L +M + ++ L+
Sbjct: 141 MAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIH 200
Query: 241 LYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
L + G + +++ S P L A + A GK E + K M +
Sbjct: 201 LLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRP 260
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ +T ++V + + ++ ++M + GC + + L+ G++E A +
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
+K + N KP Y+ ++D++ GD+ + ++ + +M GY+ F LV
Sbjct: 321 VK-MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Query: 418 AK--TPAYGIRDRMRADNVFPN 437
A+ A+ D MR + PN
Sbjct: 380 ARDFDEAFATFDVMRKQGILPN 401
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 121/290 (41%), Gaps = 8/290 (2%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
F++ +L+ + G+S +T + ++ + M S +PD+ T I+ +KA +
Sbjct: 824 FTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNK 279
+ + + T L+ A++G+ ++ R+++ P + I +GK+
Sbjct: 884 LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD 943
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
E A +FKRM + K YT L+ + + ++ +G +A++
Sbjct: 944 TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + +E+A + L + +N+ P +Y +M G + ++++ ++
Sbjct: 1004 IINGLGKSQRMEEA--LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061
Query: 399 VGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
G + L++ Y ++ P AY + M D PN AQ+
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 147/368 (39%), Gaps = 14/368 (3%)
Query: 59 IERDYASCLDLIAKLR---GLQKAESYIQKIPESFRGEVV----YRTLLANCVAGNNVKK 111
I RD + L + L GL++ + + K+ ++ G V+ Y L+ + +
Sbjct: 153 IRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKA--GFVLNAYSYNGLIHLLIQSGFCGE 210
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
A EV+ RM +G + + L++ L K+ D + V +L ME ++ +++ I I
Sbjct: 211 ALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIR 270
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ G++ + ++ M EG PD T +L + G+ E A+ + +M+ + K
Sbjct: 271 VLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAI--EAWGKLNKVEEAEAVF 287
+ LL + + G D W E++ ++ DV I + K +EA A F
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
M K + Y L+ + L+ M G ++ + +
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKS 450
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
GE KA K + + P + + A+ G + + +F+ +R+ G
Sbjct: 451 GETGKAVETFEKMKAKG-IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 408 FQTLVQAY 415
+ +++ Y
Sbjct: 510 YNMMMKCY 517
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 105/281 (37%), Gaps = 45/281 (16%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+++ VL M K L +SY LI + QS +V M SEG++P T + L
Sbjct: 174 RQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSAL 233
Query: 204 AKHYVSGGRKEKAE---AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE- 259
V+ G+K +E +LKEME L+ + +T + + + GK D+ I++ +
Sbjct: 234 M---VALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290
Query: 260 --SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
P L I+A ++E A+ +F +M K Y LL + D L
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
K+ QM G + P ++ +++
Sbjct: 351 FKEFWSQMEADG------------------------------------YMPDVVTFTILV 374
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
D K D F MR+ G + + TL+ + A
Sbjct: 375 DVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 102/254 (40%), Gaps = 6/254 (2%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
K GI P ++ L + EKA + K+M+ +T +LL ++ + GK
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 249 DQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
++ ++K S P I + K N +++A F + + + + + Y L
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ A L + L ++M++ GC ++ L+ + + G+ E A L K
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ-LFKRMVNEG 958
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAY 423
+P SY +++D G + F+ ++ G F + ++ ++ A
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 424 GIRDRMRADNVFPN 437
+ + MR + P+
Sbjct: 1019 ALYNEMRNRGIVPD 1032
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 41 MEQDQVPGDLVLYSNLIELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 100
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 101 FREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNI 160
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 161 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 220
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 221 IEQNVVTYNSMIMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKXGKLDRA 279
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 280 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 333
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/358 (18%), Positives = 143/358 (39%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL +A VF+ M+
Sbjct: 88 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFLEALSVFSEMR 147
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 148 EIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 207
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 208 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 267
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ + GK D+ A +++ S + VE + +F+ M
Sbjct: 268 SIWGKXGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 301
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 302 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 351
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 352 AIDAGEVKDITVFERMIHLLSKYKKYSNVI---EVFDKMRGLGYFPDSNVIAVVLNAY 406
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 98/236 (41%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGD-------LVLYS 54
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE K +A ++F R+ ++ Y
Sbjct: 55 NL-------------------------IELSRKXCDYSKAISIFSRLKRSGFTPDLVAYN 89
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++ E + +A S+ ++
Sbjct: 90 AMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYXENKKFLEALSV-FSEMRE 148
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
K ++ +++D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 IKCXLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 204
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 133/336 (39%), Gaps = 42/336 (12%)
Query: 88 ESFRGEVVYRTLLANCV-AGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
E F V + L+ + V G ++K+ ++ M +G + + + D ++
Sbjct: 133 EVFPDSVTFSVLMNSAVKGGGSLKEVWALYQDMVQRGISPSVSVFGTFIKAF--CDAGRL 190
Query: 147 ADVLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+ LL+ MEK NV Y ILID G+ L + ++ M+ GI+P+ T L
Sbjct: 191 KEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNAL 250
Query: 204 AKHYVSGGRKEK---AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES 260
Y+ K + AE +++EME L T +LL
Sbjct: 251 ITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLL--------------------- 289
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
A+G E+AE VF RM + ++ YTAL+ YA+ + K
Sbjct: 290 -----------GAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAAR 338
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
+ + + G + + AL+ + G++E ++ K+ + +YM I+D +
Sbjct: 339 AFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVW-KSMKVEGCVATRVTYMTILDAF 397
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
K+G + + G+ + L+ +Y+
Sbjct: 398 QKQGRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYM 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 85/203 (41%), Gaps = 6/203 (2%)
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
+P + V I+A+ +++EA + M K + Y L+ Y L + +
Sbjct: 171 SPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEG 230
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEK--ADSILLKAQQQNKFKPMFSSYMLIMD 378
L+ +M E G ++AL+ ++E + L++ + + P ++ +++
Sbjct: 231 LMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLG 290
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFP 436
Y G E++F+RM+ G + L+ AY + P R + +R V
Sbjct: 291 AYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGV-- 348
Query: 437 NKALAAQVAQVDAFRKTAVSELL 459
N + A +DA+R+ E++
Sbjct: 349 NPTVETYTALLDAYRRAGDLEMV 371
>gi|410110145|gb|AFV61152.1| pentatricopeptide repeat-containing protein 123, partial [Nashia
inaguensis]
Length = 433
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 38 MEQDQVPGDLILYSNLIELSXKLCDYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKL 97
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 98 FREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 157
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + S Y LL+VY D ++ + L + M
Sbjct: 158 MIDVYGQLGMAKEADKLFWGMRKMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 217
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 218 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 276
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 277 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 330
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 DEMRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGD-------LILYSNL 53
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
IE KL +A ++F R+ ++ Y A+
Sbjct: 54 -------------------------IELSXKLCDYSKAISIFSRLKRSGFXPDLVAYNAM 88
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 INVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKC 148
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPSVVSYNTLLRVYGDAE 201
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 109/267 (40%), Gaps = 43/267 (16%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 85 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 144
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL----------------------------- 151
+ + CN ++ +Y +L K AD L
Sbjct: 145 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPSVVSYNTLLRVYGDAELFG 204
Query: 152 -------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
LM+++N++ +Y ++ I G++ + + +++ M+S GIEP+S T + +
Sbjct: 205 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 264
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNP 262
+ G+ ++A + +++ ++ + + ++ Y G R+ + N
Sbjct: 265 SIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNI 324
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKR 289
D + + G ++EEA VF++
Sbjct: 325 PRDTAIHILAGAG---RIEEATYVFRQ 348
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/379 (20%), Positives = 162/379 (42%), Gaps = 12/379 (3%)
Query: 56 LDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAE 113
D I D A ++ KL+ QKAES + + + V+ L+ A ++A
Sbjct: 732 FDKISIDVA-VIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQAR 790
Query: 114 EVFNRMKDKGFPVTSFACN---QLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
VFN M G T + N Q LI+ RL++ V V ++ ++++ S +++D
Sbjct: 791 AVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYV--VTQEIQDMGFQISKSSILLILD 848
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ +++ ++ + MK+ G P I+ G R EAM+ EME +
Sbjct: 849 AFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRP 908
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVF 287
+L LY + + +I++ + + P D I + + ++ EE ++
Sbjct: 909 DLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLM 968
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
M + + Y +L+ + +++ ++L +++ G + + ++K++
Sbjct: 969 HEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNS 1028
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G KA+ LL + +P ++ L+M Y G EK+ ++++G
Sbjct: 1029 GNHSKAEK-LLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLP 1087
Query: 408 FQTLVQAYINAKTPAYGIR 426
+ +++ AY+ K + GI+
Sbjct: 1088 YSSVIDAYLKNKDYSVGIQ 1106
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 123/309 (39%), Gaps = 38/309 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y TL++ C +N+++A +VF+ M+ + C L
Sbjct: 283 ITYNTLISACSRESNLEEAVKVFDDME-------AHYCQPDL------------------ 317
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
++Y +I + G+ +Q+ + ++S+G PD+ T L + G
Sbjct: 318 ---------WTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNV 368
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMAA 270
+K + + EM T ++ +Y + G+ A Q+ R KL P
Sbjct: 369 DKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVL 428
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I++ GK NK+ EA V M K + + Y+AL+ YA + ++ M SG
Sbjct: 429 IDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGI 488
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
LA+ ++ + + E KA +L + ++ P + Y ++ + + +
Sbjct: 489 RPDQLAYSVMLDVFLRFDEATKA-MMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQ 547
Query: 391 KIFHRMRQV 399
+I M +V
Sbjct: 548 RIIRDMEEV 556
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 128/308 (41%), Gaps = 38/308 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES-FRGEV-VYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + L+ K + ++ E+ + ++ E+ FR ++ ++ ++L ++ +K +++ R+K
Sbjct: 878 YRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIK 937
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ--FSYKILIDIKGQSNDL 178
+ G N L+++Y R D + L+ E + L +YK LI G+ +
Sbjct: 938 EDGLQPDEDTYNTLIVMYCR-DHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLV 996
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+++ E + S+G + D S I+ K Y + G KAE +L M+ ++ T LL
Sbjct: 997 VDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLL 1056
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ Y G+ +EAE V + + LS
Sbjct: 1057 MVSYGSSGQ--------------------------------PQEAEKVLTNLKEMGLSLS 1084
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T Y++++ Y +K S G + +M + G W ++ A +LL
Sbjct: 1085 TLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDA-ILLL 1143
Query: 359 KAQQQNKF 366
+A Q + F
Sbjct: 1144 QALQDSGF 1151
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPW--LDVCMAA 270
+A + +M + +K + R ++ +Y ++G + + L E P+ + + +A
Sbjct: 682 EASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMPFDKISIDVAV 741
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
IE +GKL ++AE++ + + + K + AL++ YA + + + M G
Sbjct: 742 IETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGP 801
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + L++ + G +E+ ++ + Q F+ SS +LI+D +A+ +I +
Sbjct: 802 SPTVDSINGLLQALIVDGRLEEL-YVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAK 860
Query: 391 KIFHRMRQVGYVARFKQFQTLV 412
KI+ M+ GY ++ ++
Sbjct: 861 KIYQGMKAAGYFPTMHLYRIMI 882
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/338 (17%), Positives = 145/338 (42%), Gaps = 19/338 (5%)
Query: 90 FRGE-VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD 148
F G +Y +L+ C +A ++F+ M+ G + ++++Y ++ + A
Sbjct: 660 FTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAH 719
Query: 149 VLL-LMEKENVKLTQFSYKI-LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
L+ L E E + + S + +I+ G+ + +V ++ D L +
Sbjct: 720 YLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCTNVDRKVWNALIQA 779
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI--------WKLC 258
Y + G E+A A+ M D + LL G+ +++ + +++
Sbjct: 780 YAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQIS 839
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH-YTALLKVYADHKMLSK 317
+S+ L ++A+ +++ + EA+ +++ M K T H Y ++ + K +
Sbjct: 840 KSSILL-----ILDAFARVSNIAEAKKIYQGM-KAAGYFPTMHLYRIMIGLLCKGKRVRD 893
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ +V +M E+G W+++++L+ + K I + +++ +P +Y ++
Sbjct: 894 VEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRI-KEDGLQPDEDTYNTLI 952
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Y + + H MR++G + +++L+ A+
Sbjct: 953 VMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAF 990
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 144/355 (40%), Gaps = 18/355 (5%)
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKE 156
T+LA N A E+F R + T N ++ +Y R + KV +L LM +
Sbjct: 181 TILAVLGKANQEALAVEIFIR-AESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRER 239
Query: 157 NVKLTQFSYKILIDIKGQSNDLTG--MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ S+ LI+ + ++ +T +++ ++ G+ PD T L E
Sbjct: 240 GCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLE 299
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL------DVCM 268
+A + +ME + WT ++ +Y G + + +++K ES + + +
Sbjct: 300 EAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLL 359
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A G ++KV+E +M +++ Y ++ +Y L + M S
Sbjct: 360 YAFAREGNVDKVKEICNEMVQMGFIRDEMT---YNTIIHMYGKQGQHGLALQLYRDMKLS 416
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN-KFKPMFSSYMLIMDQYAKRGDIH 387
G + + L+ + ++ +A +++ ++ N KP +Y ++ YA+ G
Sbjct: 417 GRTPDAITYTVLIDSLGKANKMVEAANVM--SEMLNIGVKPTLRTYSALICGYARAGQRL 474
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNKAL 440
E+ F MR+ G + ++ ++ + T A + M D + P+ +
Sbjct: 475 EAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTV 529
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/477 (19%), Positives = 193/477 (40%), Gaps = 64/477 (13%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
P++ +++ L +G DL +AE L + M+ L L++ Y
Sbjct: 356 PNLFVYNALINALCKGEDLDKAE-------LLYKNMHSMNLPLNDV------------TY 396
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVY--RTLLANCVAGNNVKKAEEVFNRMKD 121
+ +D K L AESY ++ E E +Y +L+ ++ AE ++ +M +
Sbjct: 397 SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMIN 456
Query: 122 KGF--PVTSFA------CNQLLI-----LYKRLDKKKVADVLLL---------------- 152
+G T+F C L + LY+ +++K++A +
Sbjct: 457 EGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAE 516
Query: 153 -------MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
M + +K T+ +Y ++I+ +++++ +++E M G+ PD+ T L
Sbjct: 517 ASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLIS 576
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWL 264
S GR A+ + ++ NLK + LL Y G+ + ++ ++ + +
Sbjct: 577 GLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINM 636
Query: 265 D-VCMAA-IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
D VC A I+ K ++ + K+M + + YT+++ Y+ K + +
Sbjct: 637 DLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECL 696
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
M C + + A + + GE+++A + K N P +Y +D K
Sbjct: 697 DLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTAN-ISPNSVTYGCFLDSLTK 755
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
G++ + H M + G +A + L++ + + A + M + +FP+
Sbjct: 756 EGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPD 811
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 133/333 (39%), Gaps = 21/333 (6%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y L+ G V +A EV +++KG L++ + R+ ++ D + LM
Sbjct: 254 VTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRV--QQFDDGICLM 311
Query: 154 EKENVKL----TQFSYKILID-IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
E V+L T+ + L+D ++ + N + D VV+ + G P+ L
Sbjct: 312 -NEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVK-LGRFGFLPNLFVYNALINALC 369
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN------ 261
G +KAE + K M NL + T +L+ + + G D + ++ E
Sbjct: 370 KGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIY 429
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P+ + I K + AE ++ +M + + +T L+ Y + K L
Sbjct: 430 PY----NSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKL 485
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
++M E + AL+ E+ +A S L + K KP +Y ++++ Y
Sbjct: 486 YREMNEKEIAPSVYTFTALIYGLCSTNEMAEA-SKLFDEMVERKIKPTEVTYNVMIEGYC 544
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K ++ ++ M G V ++ L+
Sbjct: 545 KAHNMDKAFELLEDMLHNGLVPDTYTYRPLISG 577
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 119/289 (41%), Gaps = 17/289 (5%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLD 142
+P+++ YR L++ + V A++ + + K + + LL Y RL
Sbjct: 565 VPDTY----TYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLT 620
Query: 143 KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
+ A ++ N+ L + +LID + D+ + +++ M +G+ PDS
Sbjct: 621 EALSASCEMIQRGINMDLV--CHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTS 678
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN 261
+ Y G +K+ L M + + T + ++G+ D+ ++ K+ +N
Sbjct: 679 MIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTAN 738
Query: 262 --PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
P +++ K ++EA + M K +T Y L++ + L +
Sbjct: 739 ISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGLLA-NTATYNILIRGFCKLGRLIEAT 797
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA----DSILLKAQQQN 364
++ +M E+G + + ++ H G+V A D++L K + +
Sbjct: 798 KVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPD 846
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 130/301 (43%), Gaps = 10/301 (3%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K+ + +L +K+ LT +Y LI ++NDL ++ M+ +G + D +++
Sbjct: 193 EKLYEAFILSQKQT--LTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLI 250
Query: 204 AKHYVSGGRKEKA--EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES- 260
+ + + + + +E+E D ++ ++ +A+ G ++ + ++
Sbjct: 251 IQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQAS 310
Query: 261 --NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
NP +A I A G + EEAEA+F+ M + K K + ALLK YA L +
Sbjct: 311 GLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEA 370
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+ ++ +M +SG + LV + G E A LLK + +P + I+
Sbjct: 371 ESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARH-LLKQMEARNVQPNTFIFSRILA 429
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFP 436
Y RG+ T ++ M+ + ++ + N A DRM ++ + P
Sbjct: 430 SYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEP 489
Query: 437 N 437
+
Sbjct: 490 D 490
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 135/313 (43%), Gaps = 7/313 (2%)
Query: 71 AKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTS 128
A+ L++AES I ++ +S E Y L+ + A + +M+ + +
Sbjct: 362 ARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT 421
Query: 129 FACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
F +++L Y+ R + +K +VL M+ NVK + Y ++ID G+ N L + +
Sbjct: 422 FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR 481
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M SEGIEPD T L + G ++A + +EM+ T +++ E K
Sbjct: 482 MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK 541
Query: 248 ADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
D+V + +S P + ++ +G + +A + M K S Y A
Sbjct: 542 WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA 601
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
L+ +A + + + + M G LA ++L+ E +A SI L+ ++N
Sbjct: 602 LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSI-LQYMKEN 660
Query: 365 KFKPMFSSYMLIM 377
KP +Y +M
Sbjct: 661 DVKPDVVTYTTLM 673
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/408 (18%), Positives = 162/408 (39%), Gaps = 48/408 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI----------------L 137
+ Y L+ C N+++KA + +RM+ GF + F L+I L
Sbjct: 210 LTYNALIGACARNNDLEKALNLMSRMRQDGFQ-SDFINYSLIIQSLTRTNKIDIPLLQKL 268
Query: 138 YKRLDKKKVA-------DVLL----------------LMEKENVKLTQFSYKILIDIKGQ 174
Y+ ++ K+ D++L +++ + ++ +I G
Sbjct: 269 YEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGN 328
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
+ + E MK G++P L K Y G ++AE+++ EME L T
Sbjct: 329 HGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHT 388
Query: 235 CRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
LL+ YA +G+ + + K E+ P + + ++ + ++ V + M
Sbjct: 389 YGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMK 448
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K Y ++ + L + +M G + W+ L+ H + G +
Sbjct: 449 NSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHD 508
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+A + L + Q+ + P ++Y ++++ ++ + + +M+ G + + TL
Sbjct: 509 RA-AELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTL 567
Query: 412 VQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
V Y ++ A + M++ + P+ + A ++AF + +SE
Sbjct: 568 VDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYN--ALINAFAQRGLSE 613
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 119/317 (37%), Gaps = 49/317 (15%)
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+ ++ M+ G+ PD T +L Y + GR E A +LK+ME N++ + + +L
Sbjct: 371 ESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILAS 430
Query: 242 YAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
Y + G K +V R K P I+ +GK N ++ A + RM +
Sbjct: 431 YRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPD 490
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI-- 356
+ L+ + H + +L ++M E G P ++ ++ GE EK D +
Sbjct: 491 VVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMIN---SLGEQEKWDEVKI 547
Query: 357 -----------------------------------LLKAQQQNKFKPMFSSYMLIMDQYA 381
L+A + KP + Y +++ +A
Sbjct: 548 LLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFA 607
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN-- 437
+RG + M G +L+ A+ + A+ I M+ ++V P+
Sbjct: 608 QRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVV 667
Query: 438 --KALAAQVAQVDAFRK 452
L + +VD F K
Sbjct: 668 TYTTLMKALIRVDKFDK 684
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 120/306 (39%), Gaps = 42/306 (13%)
Query: 31 MANLRTRRMYGKALQ-LSEWLETNKKLDFIERDYASCLDLIAKLRGLQKA-ESYIQKIPE 88
+A+ R R + K + L E +N K D Y +D K L A E+Y + + E
Sbjct: 428 LASYRDRGEWQKTFEVLREMKNSNVKPD--RHFYNVMIDTFGKFNCLDHAMETYDRMLSE 485
Query: 89 SFRGEVVYRTLLANCVAGNNVK-KAEEVFNRMKDKGF---PVTSFACNQLLILYKRLDKK 144
+VV L +C + +A E+F M+++G+ P T L ++ D+
Sbjct: 486 GIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEV 545
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K+ +L M+ + + +Y L+DI G S +EAMKS G++P ++ L
Sbjct: 546 KI--LLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALI 603
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL 264
+ G E+A + M D L+ P L
Sbjct: 604 NAFAQRGLSEQAVNAYRVMISDGLR--------------------------------PSL 631
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ I A+G+ + EA ++ + M + K YT L+K K + ++
Sbjct: 632 LALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEE 691
Query: 325 MAESGC 330
M SGC
Sbjct: 692 MILSGC 697
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 10/260 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y +LL +KA EVFN+MK + N L+ Y K+ +L
Sbjct: 259 VSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHE 318
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
MEK+ ++ S L+ G+ +T ++ ++EA +S GI+ ++ K Y+S G
Sbjct: 319 MEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGD 378
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
EKA + M N+K T +L+ ++LGK + R ++ D+ + +
Sbjct: 379 YEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFE--------DMVDSKVS 430
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
+ K K+ EAE+ F M K+ YT L++ Y + DL K+M +G
Sbjct: 431 S-TKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPP 489
Query: 333 GPLAWDALVKLHVEGGEVEK 352
+ +L++ +GGE E+
Sbjct: 490 DAIICSSLMEAFNKGGEPER 509
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 135/314 (42%), Gaps = 7/314 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSY 165
N V +A +F M++ + N L+ + R + + A +++ M + + T+ +Y
Sbjct: 25 NQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTY 84
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+I+ G + + ++ + M G+ PD T I+ +G + KA + + M+G
Sbjct: 85 NNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKG 144
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKV 280
N+ +T +++ ++G+ + ++ + + P + + + ++ +V
Sbjct: 145 ANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQV 204
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
E +A+F M K + Y +LL YA M + + + ++G +++ +L
Sbjct: 205 ENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSL 264
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ + + EKA + K ++N KP SY ++D Y G + + H M + G
Sbjct: 265 LNAYGRSAQPEKAREVFNK-MKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDG 323
Query: 401 YVARFKQFQTLVQA 414
TL+ A
Sbjct: 324 IQPDVVSISTLLAA 337
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 158/437 (36%), Gaps = 83/437 (18%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKKKVADVLLL 152
Y ++ C A N KKA E+ +M + G N +L K K +
Sbjct: 82 TTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEI 141
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM--------KSEGIEPDSSTQAILA 204
M+ NV F+ I+I L + Q EA+ + PD T +
Sbjct: 142 MKGANVTSDTFTLNIIIHC------LVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIM 195
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--- 261
Y G+ E +A+ M + +K + LL YA G + I+ L + N
Sbjct: 196 HSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLR 255
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P + + + A+G+ + E+A VF +M K K + Y AL+ Y ML + L
Sbjct: 256 PDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGL 315
Query: 322 VKQMAESGCH-----------------------------------IGPLAWDALVKLHVE 346
+ +M + G + +A+++ +K ++
Sbjct: 316 LHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLS 375
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMD-----------------------QYAKR 383
G+ EKA + ++ N KP +Y +++ K
Sbjct: 376 FGDYEKALELYTSMRESN-VKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKE 434
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP---AYGIRDRMRADNVFPNKAL 440
G + E F M++ G + TL+QAY NA A+ + M + + P+ +
Sbjct: 435 GKLSEAESTFSSMKKSGCFPDVLTYTTLIQAY-NAGGGWKRAWDLFKEMEVNGIPPDAII 493
Query: 441 AAQVAQVDAFRKTAVSE 457
+ + ++AF K E
Sbjct: 494 CSSL--MEAFNKGGEPE 508
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 24/185 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
V TLLA C + + E + + +G + + A N + Y D +K ++
Sbjct: 329 VSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTS 388
Query: 153 MEKENVKLTQFSYKILI--------------------DIKGQSND---LTGMDQVVEAMK 189
M + NVK +Y ILI D K S L+ + +MK
Sbjct: 389 MRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMK 448
Query: 190 SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD 249
G PD T L + Y +GG ++A + KEME + + C L+ + + G+ +
Sbjct: 449 KSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPE 508
Query: 250 QVARI 254
+V ++
Sbjct: 509 RVLQL 513
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Query: 76 LQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
L +AES + +S F + Y TL+ AG K+A ++F M+ G P + C+
Sbjct: 437 LSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSS 496
Query: 134 LLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
L+ + K + ++V ++ M+K+++ L Q SY +I D +++E + S
Sbjct: 497 LMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDS 554
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 132/327 (40%), Gaps = 7/327 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V Y T++ ++ K +N M D+ N ++ L K K +VL
Sbjct: 89 VSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTT 148
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K V +Y ++ S ++ M+S+G+EPD T L + GR
Sbjct: 149 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 208
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
+A + M LK T LL YA G ++ + L N P V
Sbjct: 209 CTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 268
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+ K KVEEA VF +M + + Y A++ + + +QM + G
Sbjct: 269 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN-KFKPMFSSYMLIMDQYAKRGDIHS 388
G + +++L+ + E+A+ ++L+ + +F + I+D + K G +
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF--FNSIIDSHCKEGRVIE 386
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
+EK+F M ++G + TL+ Y
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGY 413
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 133/326 (40%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V Y +++A V KA EV M G N ++ + + K A V L
Sbjct: 124 VTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKK 183
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L+D ++ T ++ ++M G++P+ +T L + Y + G
Sbjct: 184 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 243
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ +L M + + + + +L+ YA+ K ++ ++ NP A
Sbjct: 244 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGA 303
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K +VE+A F++M Y +L+ + ++L+ +M + G
Sbjct: 304 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 363
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D Y G +
Sbjct: 364 ICLNTIFFNSIIDSHCKEGRVIESEK-LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 422
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
K+ M VG + TL+ Y
Sbjct: 423 TKLLASMVSVGMKPDCVTYSTLINGY 448
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 141/343 (41%), Gaps = 55/343 (16%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K ++ A Y Q I E G +VY +L+ N ++AEE+ M
Sbjct: 301 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 360
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 361 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFD---LMVRIGVKPDIITYSTLIDGYCLAG 417
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T + L Y R + A + +EME + T
Sbjct: 418 KMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYN 477
Query: 237 LLL-------------PLYAELGKA----------------------DQVARIWK-LCES 260
++L LY + K+ D R+++ LC
Sbjct: 478 IILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLC-- 535
Query: 261 NPWLDVCMAA------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
+D+ + A I+A K+ + +EA+ +F S + Y + + +
Sbjct: 536 --LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 593
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
L + L M ++GC + + +V+ ++ GE+ +A + L
Sbjct: 594 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 636
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 122/333 (36%), Gaps = 42/333 (12%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKG--FP--VTSFACNQLLILYKRL 141
IP+ F Y LL N ++A E+ + M D G P V S++ + +K
Sbjct: 48 IPDVFS----YNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS-TVINGFFKEG 102
Query: 142 DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
D K M + + +Y +I ++ + +V+ M G+ PD T
Sbjct: 103 DLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYN 162
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
+ + S G+ ++A LK+M D ++ T L+ LC++
Sbjct: 163 SIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY---------------LCKNG 207
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
+ EA +F M+K K Y LL+ YA L + L
Sbjct: 208 -----------------RCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGL 250
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ M +G H + LV + + +VE+A + K +QQ P +Y ++
Sbjct: 251 LDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG-LNPNAVTYGAVIGILC 309
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K G + F +M G + +L+
Sbjct: 310 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 342
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/311 (17%), Positives = 128/311 (41%), Gaps = 5/311 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V Y ++ V+ A F +M D+G + N L+ +K + A+ L+L
Sbjct: 299 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 358
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + L + +ID + + +++ + M G++PD T + L Y G+
Sbjct: 359 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 418
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
++A +L M +K T L+ Y ++ + +++ ES +P +
Sbjct: 419 MDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNI 478
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
++ + + A+ ++ ++K+ ++L Y +L +K+ + + +
Sbjct: 479 ILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 538
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ ++ ++ G ++A + + A N P + +Y L+ + +G +
Sbjct: 539 LKLEARTFNIMIDALLKVGRNDEAKDLFV-AFSSNGLVPNYWTYRLMAENIIGQGLLEEL 597
Query: 390 EKIFHRMRQVG 400
+++F M G
Sbjct: 598 DQLFLSMEDNG 608
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 139/339 (41%), Gaps = 21/339 (6%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
VY +L C+ + AE + RM G P+ F+ N ++ LY R + A V M
Sbjct: 274 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 333
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E + VK ++ LI + + Q++ M G+ PD T L Y G
Sbjct: 334 ENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDL 393
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD--VCMAA 270
E+A + EME + T +L E GK +V + ++ E D C
Sbjct: 394 EEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTL 453
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+ K + A V +RM ++ +L Y AL+ + K L + K+ + +M +G
Sbjct: 454 INAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG- 512
Query: 331 HIGP----LAWDALVKLHVEGGEVEKADSILLKA----QQQNKFKPMFSSYMLIMDQYAK 382
P L+W + G K +++ + A + F P + Y ++ + K
Sbjct: 513 -FSPNYSVLSW-------IVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCK 564
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+G I +F+ M+ G A + TL AY+ A P
Sbjct: 565 KGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKP 603
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 132/326 (40%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A + KA EV M G N ++ Y + K A L
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L+D ++ T ++ ++M G++P+ +T L + Y + G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ +L M + + + + +L+ YA+ GK DQ ++ NP
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K +VE+A F++M Y +L+ K K+L+ +M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D Y G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEK-LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 533
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
K+ M VG + TL+ Y
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGY 559
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 20/280 (7%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K ++ A Y Q I E G +VY +L+ + + KA+E+ M
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFD---LMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T L Y R E A + +EME + T
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 237 LLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
++L + + ++ + ES L++ I G K N +EA +F+ + T
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 294 WKKLSTKHYT----ALLKVYADHKMLSKGKDLVKQMAESG 329
+L T+ + ALLKV + + KDL ++ +G
Sbjct: 649 DLQLETRTFNIMIGALLKVGRN----DEAKDLFAALSANG 684
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 37 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 96
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 97 FREARSLISEMKXSGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNI 156
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 157 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 216
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 217 IEQNVVTYNSMIMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 275
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 276 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 329
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 2 MRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL-- 52
Query: 248 ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
IE KL +A ++F R+ ++ Y A++
Sbjct: 53 -----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMIN 89
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
V+ K+ + + L+ +M SG ++ L+ ++VE + +A S+ + ++
Sbjct: 90 VFGKAKLFREARSLISEMKXSGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREVKCLL 149
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 150 DLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 200
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 86/437 (19%), Positives = 179/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 8 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 64
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ S Y TLL
Sbjct: 65 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYSTLLT 124
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF+ M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 125 MYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 184
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 185 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 244
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +++ S + V
Sbjct: 245 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS-----------------SGV 287
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
E + +F+ M + Y +++ K L+ ++ + D
Sbjct: 288 EIDQILFQTM---------------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTA 328
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + ++ +Y K ++ ++F +MR
Sbjct: 329 IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYANV---VEVFDKMRG 385
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 386 LGYFPDSDVIALVLNAY 402
>gi|297829684|ref|XP_002882724.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328564|gb|EFH58983.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 518
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 179/442 (40%), Gaps = 90/442 (20%)
Query: 34 LRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGE 93
L + Y +AL++S W+ K + + D A LI + GL++AE + Q IPE+ +GE
Sbjct: 85 LHDSKRYRQALEVSNWMIEKKICNHLPEDLAVRFHLIENVLGLEEAEKFFQSIPENLKGE 144
Query: 94 VVYRTLLANCVAGNNV--KKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVL 150
+Y +LL + + +KAE F +M+ G + N ++ LY L ++ KV ++L
Sbjct: 145 SIYTSLLKSYAKSGEISLRKAEYTFEKMRKLGMLLRPSPYNSMVSLYSSLRNRNKVDEIL 204
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M++ N++L + + + D+ MD+ + + AI +++
Sbjct: 205 REMKENNLELDSPTVNNALRVYAAVCDVATMDKFL-----------ADWNAITTLEWLTT 253
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV--CM 268
KA +++ LY E G+ + V RIW L ++ D
Sbjct: 254 LEMAKAYRLIR-------------------LYGEAGEREDVYRIWDLYKNTKEKDNEGFR 294
Query: 269 AAIEAWGKLNKVEEAEAV-FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL------ 321
A I + KL+ + AE + + + + + T L+ Y M+ K L
Sbjct: 295 ALIGSLLKLDDINGAEKIYYDEWESSGLEFDLRIPTMLMSGYRAKGMVKKADKLLYKTMK 354
Query: 322 -----------VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI-------------- 356
V+++ ++ + P L+K + ++ KA
Sbjct: 355 NKRLVISINPFVEELVKNRNQVKPSDLRDLIKNLRDSNQLSKALEASTWMCEKRGFNLFP 414
Query: 357 ------------LLKAQQQNKF------KPM--FSSYMLIMDQYAKRGD--IHSTEKIFH 394
+L ++ KF K M +S Y ++ Y R D + E +F
Sbjct: 415 EDYAIRFHLIEKVLGLEEAEKFFESSIPKNMKDYSVYDTLLTSYT-RSDKTLVKAEGVFE 473
Query: 395 RMRQVGYVARFKQFQTLVQAYI 416
+MR++G++++ F +++ YI
Sbjct: 474 KMRELGFLSKLSPFNSIISLYI 495
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 6 ISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYAS 65
ISI+ + + + N + +++ + NLR KAL+ S W+ + + DYA
Sbjct: 360 ISINPFVEELVKNRNQVKPSDLRDLIKNLRDSNQLSKALEASTWMCEKRGFNLFPEDYAI 419
Query: 66 CLDLIAKLRGLQKAESYIQ-KIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKG 123
LI K+ GL++AE + + IP++ + VY TLL + + + KAE VF +M++ G
Sbjct: 420 RFHLIEKVLGLEEAEKFFESSIPKNMKDYSVYDTLLTSYTRSDKTLVKAEGVFEKMRELG 479
Query: 124 FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENV 158
F N ++ LY K KV +L M++ N+
Sbjct: 480 FLSKLSPFNSIISLYIEQRKLSKVNKLLCDMKQNNI 515
>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 426
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 132/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K GI PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDV--CMA 269
++A +++ EM + + +L +Y E K + +++ + E N LD+ C
Sbjct: 95 FKEARSLISEMRVAGVMPDTVSYSTILTMYVENHKFLEALSVFREMREINCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L+ +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ ++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNTMMMIYGKTLEHEKANN-LIQEMQNRGIEPNAITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G +QT++ AY A A+ R + R DN+ + A+
Sbjct: 274 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 327
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 145/356 (40%), Gaps = 40/356 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQ--KIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +++ K + ++A S I ++ V Y T+L V + +A VF M+
Sbjct: 82 YNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTMYVENHKFLEALSVFREMR 141
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +LD K AD L M K ++ SY L+ + G +
Sbjct: 142 EINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAELFG 201
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNAIT----- 256
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
Y+ + I WGK+ K++ A +F+++ + ++
Sbjct: 257 --YSTI-------------------------ISIWGKVGKLDRAAMLFQKLRSSGVEIDQ 289
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 290 VLYQTMIVAYERAGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATWVFRQ 345
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K + + + ++D ++K + ++F +MR +GY ++ AY
Sbjct: 346 AIDAGEVKDI-TVFERMIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLNAY 400
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 98/231 (42%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y +++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G +++ ++ ++VE + +A S+ + ++ N
Sbjct: 89 FGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTMYVENHKFLEALSVFREMREINCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + +++F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAE 198
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
++V +VL M + Y +ID + L ++++ M S G++P+ +
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-- 261
K S R ++AE +L EM + T +L+ + + G D+V + + S+
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P + I + K ++EA + K MS K +T YT +LK ++
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L+ QM + GC P+ ++ L+ + G VE+A LLK N P SY ++D
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGL 506
Query: 381 AKRGDIHSTEKIFHRMRQVG 400
K G ++ + M G
Sbjct: 507 GKAGKTEEALELLNVMVNKG 526
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 139/338 (41%), Gaps = 23/338 (6%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNR 118
R YA+ +D I K L+ A + ++P + VV Y T+L + K+AEE+ +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
M K P+ N L+ + + V V+ L+E+ S+ + D+ + +
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQ--NGLVDRVIELLEQ------MLSHGCMPDVITYTTVI 398
Query: 179 TG------MDQVV---EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
G +D+ V ++M S G +P++ + I+ K S GR AE ++ +M
Sbjct: 399 NGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP 458
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ T L+ + G +Q + K + +P L I+ GK K EEA +
Sbjct: 459 PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
M +T Y+++ + ++K + + ++ + ++A++ +
Sbjct: 519 LNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCK 578
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
E ++A N P S+Y +++ A G
Sbjct: 579 RWETDRAID-FFAYMVSNGCMPNESTYTMLIKGLASEG 615
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 132/326 (40%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A + KA EV M G N ++ Y + K A L
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L+D ++ T ++ ++M G++P+ +T L + Y + G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ +L M + + + + +L+ YA+ GK DQ ++ NP
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K +VE+A F++M Y +L+ K K+L+ +M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D Y G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEK-LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 533
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
K+ M VG + TL+ Y
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGY 559
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 20/280 (7%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K ++ A Y Q I E G +VY +L+ + + KA+E+ M
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFD---LMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T L Y R E A + +EME + T
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 237 LLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
++L + + ++ + ES L++ I G K N +EA +F+ + T
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 294 WKKLSTKHYT----ALLKVYADHKMLSKGKDLVKQMAESG 329
+L T+ + ALLKV + + KDL ++ +G
Sbjct: 649 DLQLETRTFNIMIGALLKVGRN----DEAKDLFAALSANG 684
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 13/194 (6%)
Query: 248 ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
AD+V LC + C A +++ A + K ++ +T LLK
Sbjct: 84 ADEVTP--NLCTYGILIGSCCCA-------GRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134
Query: 308 VYADHKMLSKGKDLV-KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL-LKAQQQNK 365
K S D+V ++M + GC +++ L+K + ++A +L +
Sbjct: 135 GLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD 194
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAY 423
P SY +++ + K GD+ +H M G + + +++ A A+ A
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 424 GIRDRMRADNVFPN 437
+ M + V PN
Sbjct: 255 EVLTSMVKNGVMPN 268
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 133/338 (39%), Gaps = 38/338 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
++Y TL+ + N +++AE +++ M+ KG TS N L+ Y R + + + LLL
Sbjct: 82 IIYNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQPDIIEKLLLE 141
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGM--DQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ + SY LI G+ ++ M D + MK GI+P S + L Y
Sbjct: 142 MQDAGLAPNAKSYTCLISAYGRQKKMSDMAADAFLR-MKKAGIKPTSYSYTALIHAYSVS 200
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
G EKA + M+ + +K T LL + G + IWKL
Sbjct: 201 GWHEKAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMR---------- 250
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
KVE F LL +A + +D++ + + G
Sbjct: 251 -------EKVEGTRVTF---------------NILLDGFAKQGHYMEARDVINEFKKFGL 288
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
H + ++ L+ + GG+ K LLK K +P +Y ++ Y + D
Sbjct: 289 HPTVMTYNMLMNAYARGGQDSKLPQ-LLKEMATLKLEPDSITYTTMIYAYVRVRDFRRAF 347
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDR 428
M + G V K +Q L +A ++ K RD+
Sbjct: 348 FYHKMMVKSGKVPDAKSYQKL-RAILDVKAAIKNRRDK 384
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 132/328 (40%), Gaps = 24/328 (7%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFS 164
G K+A E F RM KG + L+ + KK A ++ ME+ +
Sbjct: 24 GCTAKEAWEFFERMTRKGVKWSPEVLGALIKSFCDEGLKKEALIIQTEMERRGISSNAII 83
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y L+D +SN + + + M+++G++P S+T IL Y + + E +L EM+
Sbjct: 84 YNTLMDSYSKSNQIEEAEGLYSEMQAKGLKPTSATFNILMDAYSRRMQPDIIEKLLLEMQ 143
Query: 225 GDNLKEHRWTCRLLLPLYAELGK-----ADQVARIWKLCESNPWLDVCMAAIEAWGKLNK 279
L + + L+ Y K AD R+ K P A I A+
Sbjct: 144 DAGLAPNAKSYTCLISAYGRQKKMSDMAADAFLRM-KKAGIKPTSYSYTALIHAYSVSGW 202
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVY---ADHKMLSKGKDLVKQMAESGCHIGPLA 336
E+A F+ M + K S + YT LL + D K L D+ K M +
Sbjct: 203 HEKAYITFENMQREGIKPSIETYTTLLDAFRRAGDTKTLM---DIWKLMMREKVEGTRVT 259
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFK-----PMFSSYMLIMDQYAKRGDIHSTEK 391
++ L+ + G +A ++ N+FK P +Y ++M+ YA+ G +
Sbjct: 260 FNILLDGFAKQGHYMEARDVI------NEFKKFGLHPTVMTYNMLMNAYARGGQDSKLPQ 313
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ M + + T++ AY+ +
Sbjct: 314 LLKEMATLKLEPDSITYTTMIYAYVRVR 341
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y LI+ G S + +V + M G+ PD T I+ Y SG +
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA + + M+G ++ T +++ ++LG++ Q ++ K E P +
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ + + ++E AVF+ M K + Y AL+ YA H M ++ + +
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G +++ L+ + + KA + L +++ + KP +Y ++D Y G +
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFLA 442
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+IF +M Q G TL+ A
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 142/356 (39%), Gaps = 25/356 (7%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLL 152
V Y LL + KA+EVF M+ + N L+ Y + ++
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ +K S L+ +S +D V+ A +S GI +++ Y++
Sbjct: 451 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 510
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWL-DVCMA 269
EKA A+ + M +K T +L+ + K + K E S P +V +
Sbjct: 511 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 570
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+ K +V EAE++F +M + YT++L Y + K +L +M +G
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 630
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK-------FKPMFSS---------- 372
+A AL++ +GG+ +L+ ++ + F +FS+
Sbjct: 631 IEPDSIACSALMRAFNKGGQPSNV-FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRA 689
Query: 373 --YMLIMDQYAKRGDIHSTEKIFHRMRQVGYV-ARFKQFQTLVQAYINAKTPAYGI 425
+ +MD Y I T ++ H + G V A K F ++ + + Y I
Sbjct: 690 IDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 745
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 9/327 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y L+ C + N ++A EV +M D G N +L YK + K LM
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 154 EKENVKLTQFSYKILI---DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
+ V+ ++ I+I GQS+ + + ++E PD T + Y
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE-CRPDVVTFTSIMHLYSVK 333
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVC 267
G E A+ + M + LK + + L+ YA G + + + N P +
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ ++G+ + +A+ VF M K +K + Y AL+ Y + L++ ++ +QM +
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G ++ L+ + D++L AQ + ++Y + Y ++
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG-INLNTAAYNSAIGSYINAAELE 512
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
++ MR+ A F L+
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISG 539
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 149/355 (41%), Gaps = 10/355 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDKKKVADVL 150
+ + T++ + KA +V + MK GF N L+ Y R+ K AD +
Sbjct: 231 ITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAI 290
Query: 151 LLMEKEN-VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
L EN V ++ +LID + +L+ +V E M+S+G++P T L +
Sbjct: 291 LKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCN 350
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDV 266
G+ +A+ +L EM NLK + T L+ Y + ++ ++ P +
Sbjct: 351 EGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVIT 410
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ + K K+EEA + K M + + Y L+ + + + K+L+ +M
Sbjct: 411 FNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQ 470
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
G + ++ L+ E E +KA + L+ KP +Y ++++ Y G++
Sbjct: 471 CRGVKADTVTYNILISAWCEKKEPKKA-ARLIDEMLDKGLKPSHLTYNILLNGYCMEGNL 529
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKA 439
+ + +M + G A + L+Q Y A G+ + M + PN+
Sbjct: 530 RAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRT 584
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y LI+ G S + +V + M G+ PD T I+ Y SG +
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA + + M+G ++ T +++ ++LG++ Q ++ K E P +
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ + + ++E AVF+ M K + Y AL+ YA H M ++ + +
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G +++ L+ + + KA + L +++ + KP +Y ++D Y G +
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFLA 310
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+IF +M Q G TL+ A
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 142/356 (39%), Gaps = 25/356 (7%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLL 152
V Y LL + KA+EVF M+ + N L+ Y + ++
Sbjct: 259 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 318
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ +K S L+ +S +D V+ A +S GI +++ Y++
Sbjct: 319 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 378
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWL-DVCMA 269
EKA A+ + M +K T +L+ + K + K E S P +V +
Sbjct: 379 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 438
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+ K +V EAE++F +M + YT++L Y + K +L +M +G
Sbjct: 439 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 498
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK-------FKPMFSS---------- 372
+A AL++ +GG+ +L+ ++ + F +FS+
Sbjct: 499 IEPDSIACSALMRAFNKGGQPSNV-FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRA 557
Query: 373 --YMLIMDQYAKRGDIHSTEKIFHRMRQVGYV-ARFKQFQTLVQAYINAKTPAYGI 425
+ +MD Y I T ++ H + G V A K F ++ + + Y I
Sbjct: 558 IDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 613
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 9/327 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y L+ C + N ++A EV +M D G N +L YK + K LM
Sbjct: 83 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 142
Query: 154 EKENVKLTQFSYKILIDI---KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
+ V+ ++ I+I GQS+ + + ++E PD T + Y
Sbjct: 143 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE-CRPDVVTFTSIMHLYSVK 201
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVC 267
G E A+ + M + LK + + L+ YA G + + + N P +
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ ++G+ + +A+ VF M K +K + Y AL+ Y + L++ ++ +QM +
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G ++ L+ + D++L AQ + ++Y + Y ++
Sbjct: 322 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG-INLNTAAYNSAIGSYINAAELE 380
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
++ MR+ A F L+
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISG 407
>gi|115463017|ref|NP_001055108.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|113578659|dbj|BAF17022.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|125551683|gb|EAY97392.1| hypothetical protein OsI_19323 [Oryza sativa Indica Group]
gi|215697097|dbj|BAG91091.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630985|gb|EEE63117.1| hypothetical protein OsJ_17925 [Oryza sativa Japonica Group]
Length = 757
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 130/320 (40%), Gaps = 40/320 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
+Y TL+ N +++AE VF MK+KG T+ N L+ Y +RL + V +LL M
Sbjct: 411 MYNTLINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYCRRLQPEVVESLLLEM 470
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLT-GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ ++ SY LI + GQ ++ + MK++GI P SST L Y G
Sbjct: 471 QDLGLRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTDGIMPTSSTYTSLLCAYAVNGL 530
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
EKA +M+ + LK T L+ ++ G +++ W+
Sbjct: 531 HEKAYLTYVDMKREGLKPSLETYTALIDMFRRAGDTEKLMETWR---------------- 574
Query: 273 AWGKLN-KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+N KV +F +L A H + + D++ + +G
Sbjct: 575 --SMINEKVPGTRVIFH---------------MVLDGLAKHGLYVQATDVIYEFRRAGLQ 617
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST-- 389
+ ++ L+ GG+ K LLK + KP +Y ++ YA+ D
Sbjct: 618 PTVMTYNILMNAFARGGQHYKLPQ-LLKEMAAMELKPDSVTYSTMIYAYARVRDFSRAFY 676
Query: 390 -EKIFHRMRQVGYVARFKQF 408
K+ R Q+ V+ +K+
Sbjct: 677 YHKLMVRSGQLPDVSSYKKL 696
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 129/293 (44%), Gaps = 23/293 (7%)
Query: 182 DQVVEAMKSEGIEPDSS-TQAILAKHYVSG----GRKEKAEAMLKEMEGDNLKEHRWTCR 236
D+V+E ++S + P+ ++A+L +SG GR + + K ME N++ T
Sbjct: 285 DEVLEIVES--LPPERRFSEAVLYNAAMSGLAYRGRYDDTWKVFKLMEKKNIQPDHMTSL 342
Query: 237 LLLPLYAELGKADQVAR-IWKLCE-----SNPW-LDVCMAAIEAWGKLNKVEEAEAVFKR 289
++L + + K+ A+ W+ + W LD+C++ I+ + EA +
Sbjct: 343 IMLDV---MNKSKTSAKDAWEFFQRMERKGVKWSLDICISLIKIFCDNGLKTEALIIQSA 399
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
M K +T Y L+ Y + + + + +M E G + ++ L+ + +
Sbjct: 400 MEKKGIASNTSMYNTLINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILMGAYCRRLQ 459
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI-HSTEKIFHRMRQVGYVARFKQF 408
E +S+LL+ Q +P SY ++ Y ++ + E F RM+ G + +
Sbjct: 460 PEVVESLLLEMQDLG-LRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKTDGIMPTSSTY 518
Query: 409 QTLVQAY-INA-KTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
+L+ AY +N AY M+ + + P +L A +D FR+ +E L
Sbjct: 519 TSLLCAYAVNGLHEKAYLTYVDMKREGLKP--SLETYTALIDMFRRAGDTEKL 569
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 17/260 (6%)
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD--QVVEAMKSEGIEPDSSTQAILAKH 206
V LMEK+N++ + I++D+ +S + D + + M+ +G++ L K
Sbjct: 325 VFKLMEKKNIQPDHMTSLIMLDVMNKSKT-SAKDAWEFFQRMERKGVKWSLDICISLIKI 383
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW------KLCES 260
+ G K +A + ME + + L+ Y + + ++ ++ L +
Sbjct: 384 FCDNGLKTEALIIQSAMEKKGIASNTSMYNTLINAYCKANQIEEAEGVFVEMKEKGLSAT 443
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS-KGK 319
++ M A+ + + E E++ M + + + Y L++VY K +S K +
Sbjct: 444 AMTYNILMG---AYCRRLQPEVVESLLLEMQDLGLRPNARSYNFLIRVYGQQKKMSEKAE 500
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
D +M G + +L+ + G EKA + +++ KP +Y ++D
Sbjct: 501 DAFLRMKTDGIMPTSSTYTSLLCAYAVNGLHEKAYLTYVDMKREG-LKPSLETYTALIDM 559
Query: 380 YAKRGDIHSTEKIFHRMRQV 399
+ + GD TEK+ R +
Sbjct: 560 FRRAGD---TEKLMETWRSM 576
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 116/261 (44%), Gaps = 6/261 (2%)
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
D++++ G D+ T +I+ K + G+ E+ ++K G H +++
Sbjct: 190 DKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDG 249
Query: 242 YAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
Y + G R K+ P ++ A I + K + E + + M+ ++
Sbjct: 250 YCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMN 309
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
K + ++ + ++++ +++++MAE GC ++ ++ +GG +E+AD +L
Sbjct: 310 VKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLE 369
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
KA+++ F SY +M Y K+GD + R+ ++G + + + + A
Sbjct: 370 KAKERGLLPNKF-SYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVA 428
Query: 419 K--TPAYGIRDRMRADNVFPN 437
A +R++M VFP+
Sbjct: 429 GEIDVALMVREKMMEKGVFPD 449
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 142/370 (38%), Gaps = 44/370 (11%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLME 154
Y ++ G +++A+E+ + K++G F+ L+ Y K+ D K + +L +
Sbjct: 348 YNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIA 407
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ K SY I + ++ V E M +G+ PD+ IL GR
Sbjct: 408 EIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIP 467
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC---ESNPWLDVCMAAI 271
+ +L EM N++ + L+ + G+ D+ +I+K+ +P + A I
Sbjct: 468 AMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMI 527
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ + K K+ +A + M+ Y+ ++ Y +S + QM
Sbjct: 528 KGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM------ 581
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
++KFKP +Y +++ + K+ D+ EK
Sbjct: 582 ------------------------------MKHKFKPNVITYTSLINGFCKKADMIRAEK 611
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDA 449
+F M+ V + TLV + A P A I + M + PN A + ++
Sbjct: 612 VFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYL--ING 669
Query: 450 FRKTAVSELL 459
TA S +L
Sbjct: 670 LTNTATSPVL 679
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y LI+ G S + +V + M G+ PD T I+ Y SG +
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA + + M+G ++ T +++ ++LG++ Q ++ K E P +
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ + + ++E AVF+ M K + Y AL+ YA H M ++ + +
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G +++ L+ + + KA + L +++ + KP +Y ++D Y G +
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFLA 442
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+IF +M Q G TL+ A
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 9/327 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y L+ C + N ++A EV +M D G N +L YK + K LM
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 154 EKENVKLTQFSYKILI---DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
+ V+ ++ I+I GQS+ + + ++E PD T + Y
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE-CRPDVVTFTSIMHLYSVK 333
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVC 267
G E A+ + M + LK + + L+ YA G + + + N P +
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ ++G+ + +A+ VF M K +K + Y AL+ Y + L++ ++ +QM +
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G ++ L+ + D++L AQ + ++Y + Y ++
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG-INLNTAAYNSAIGSYINAAELE 512
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
++ MR+ A F L+
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISG 539
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 142/390 (36%), Gaps = 70/390 (17%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDKK-KVADVL 150
V Y L+ A V +K G V S+ C LL Y R + K +V
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC--LLNSYGRSRQPGKAKEVF 413
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD-SSTQAILAK---- 205
L+M KE K +Y LID G + L ++ M+ +GI+P+ S +LA
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 206 ------------------------------HYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
Y++ EKA A+ + M +K T
Sbjct: 474 KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTF 533
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+L+ + K + K E L + + K +V EAE++F +M
Sbjct: 534 TILISGSCRMSKYPEAISYLKEMED---LSIPLT------KEGQVTEAESIFNQMKMAGC 584
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ YT++L Y + K +L +M +G +A AL++ +GG+
Sbjct: 585 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV-F 643
Query: 356 ILLKAQQQNK-------FKPMFSS------------YMLIMDQYAKRGDIHSTEKIFHRM 396
+L+ ++ + F +FS+ + +MD Y I T ++ H
Sbjct: 644 VLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLF 703
Query: 397 RQVGYV-ARFKQFQTLVQAYINAKTPAYGI 425
+ G V A K F ++ + + Y I
Sbjct: 704 GKSGKVEAMMKLFYKIIASGVGINLKTYAI 733
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y LI+ G S + +V + M G+ PD T I+ Y SG +
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA + + M+G ++ T +++ ++LG++ Q ++ K E P +
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ + + ++E AVF+ M K + Y AL+ YA H M ++ + +
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G +++ L+ + + KA + L +++ + KP +Y ++D Y G +
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFLA 442
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+IF +M Q G TL+ A
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 143/356 (40%), Gaps = 25/356 (7%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLL 152
V Y LL + KA+EVF M+ + N L+ Y + ++
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ +K S L+ +S +D V+ A +S GI +++ Y++
Sbjct: 451 MEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAE 510
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWL-DVCMA 269
EKA A+ + M +K T +L+ + K + K E S P +V +
Sbjct: 511 LEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSS 570
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+ K +V EAE++F +M + YT++L Y + K +L+ +M +G
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANG 630
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK-------FKPMFSS---------- 372
+A AL++ +GG+ +L+ ++ + F +FS+
Sbjct: 631 IEPDSIACSALMRAFNKGGQPSNV-FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRA 689
Query: 373 --YMLIMDQYAKRGDIHSTEKIFHRMRQVGYV-ARFKQFQTLVQAYINAKTPAYGI 425
+ +MD Y I T ++ H + G V A K F ++ + + Y I
Sbjct: 690 IDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAI 745
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 128/327 (39%), Gaps = 9/327 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y L+ C + N ++A EV +M D G N +L YK + K LM
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 154 EKENVKLTQFSYKILI---DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
+ V+ ++ I+I GQS+ + + ++E PD T + Y
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE-CRPDVVTFTSIMHLYSVK 333
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVC 267
G E A+ + M + LK + + L+ YA G + + + N P +
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ ++G+ + +A+ VF M K +K + Y AL+ Y + L++ ++ +QM +
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G ++ L+ + D++L AQ + ++Y + Y ++
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG-INLNTAAYNSAIGSYINAAELE 512
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
++ MR+ A F L+
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISG 539
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 6/312 (1%)
Query: 90 FRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD 148
R ++V T L N + +KA EVFN M+ + N L+ Y K A
Sbjct: 396 LRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAI 455
Query: 149 VLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
LL ME++ ++ S L+ G+ LT +D ++ A KS GI+ ++ Y
Sbjct: 456 SLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSY 515
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWL-- 264
+S G +KA + M N+K T +L+ +LG+ + + ++ + + N L
Sbjct: 516 LSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTK 575
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+V + I ++ K K+ EA + F M +T YT L+K Y+D + DL K+
Sbjct: 576 EVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKE 635
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M +G + +L++ +GG+ E+ L++ +Q K + +Y I+
Sbjct: 636 MENNGTQPDAIVCSSLMEALNKGGQPERVLQ-LIEFMKQKKIQLNQKAYFEIISSCTMLR 694
Query: 385 DIHSTEKIFHRM 396
D + +I +
Sbjct: 695 DWKTASQIIEHL 706
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/406 (18%), Positives = 145/406 (35%), Gaps = 80/406 (19%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKK 144
IP S Y ++ C A N KKA E+ +M + G N +L +K
Sbjct: 219 IPPS---RTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYS 275
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE--GIEPDSSTQAI 202
K +M+ V + I+I + ++ +M+ PD T
Sbjct: 276 KAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTS 335
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN- 261
+ Y G+ E +A+ M + ++ + + LL YA G + +KL + N
Sbjct: 336 IMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNG 395
Query: 262 --PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
P + + + A+G+ + E+A VF M K K + Y AL+ Y ML +
Sbjct: 396 LRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAI 455
Query: 320 DLVKQMAES-----------------------------------GCHIGPLAWDALVKLH 344
L+ +M + G + +A+++ + +
Sbjct: 456 SLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSY 515
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG---------------DIHST 389
+ G+ +KA +L + + KP +Y +++ K G +IH T
Sbjct: 516 LSLGDYKKA-LVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLT 574
Query: 390 EKI--------------------FHRMRQVGYVARFKQFQTLVQAY 415
+++ F+ M++ G + TL++AY
Sbjct: 575 KEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAY 620
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
++V +VL M + Y +ID + L ++++ M S G++P+ +
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-- 261
K S R ++AE +L EM + T +L+ + + G D+V + + S+
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P + I + K ++EA + K MS K +T YT +LK ++
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L+ QM + GC P+ ++ L+ + G VE+A LLK N P SY ++D
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGL 506
Query: 381 AKRGDIHSTEKIFHRMRQVG 400
K G ++ + M G
Sbjct: 507 GKAGKTEEALELLNVMVNKG 526
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 139/338 (41%), Gaps = 23/338 (6%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNR 118
R YA+ +D I K L+ A + ++P + VV Y T+L + K+AEE+ +
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
M K P+ N L+ + + V V+ L+E+ S+ + D+ + +
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQ--NGLVDRVIELLEQ------MLSHGCMPDVITYTTVI 398
Query: 179 TG------MDQVV---EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
G +D+ V ++M S G +P++ + I+ K S GR AE ++ +M
Sbjct: 399 NGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCP 458
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ T L+ + G +Q + K + +P L I+ GK K EEA +
Sbjct: 459 PNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALEL 518
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
M +T Y+++ + ++K + + ++ + ++A++ +
Sbjct: 519 LNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCK 578
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
E ++A N P S+Y +++ A G
Sbjct: 579 RWETDRAID-FFAYMVSNGCMPNESTYTMLIKGLASEG 615
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 165/402 (41%), Gaps = 15/402 (3%)
Query: 22 LSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAES 81
L+ +E+ + L + + KAL++ EW+ + AS L ++ L A
Sbjct: 139 LTDSELVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALE 198
Query: 82 YIQKIP--ESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY 138
+ + ES+ +V Y +L++ + +F M+ +G + N +L LY
Sbjct: 199 LFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLY 258
Query: 139 -KRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD 196
KR D ++ + M+ + ++Y +I Q++ ++ + MK G P+
Sbjct: 259 GKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPN 318
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
T L Y GG ++A +L EME + + T L+ YA G D+ A + K
Sbjct: 319 RVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKK 378
Query: 257 ------LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
LC C I A+ + + E+A F M KT + Y L+ +Y
Sbjct: 379 SLLSKGLCPDE--FTYC-TLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYG 435
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
+ L + K M E C + W++L+K G + + ++ + ++ + P
Sbjct: 436 RMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNV-FREMKRAGYMPGV 494
Query: 371 SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
++ ++++ Y + G + + I+ + + G F L+
Sbjct: 495 DTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALM 536
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 152/390 (38%), Gaps = 54/390 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y L+A +A + + KG F L+ + R ++ +K +
Sbjct: 355 VTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTE 414
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K N +Y ILIDI G+ L M +V + M+ + PD T L K + + G
Sbjct: 415 MRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGM 474
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK------LCESNPWLDV 266
+ + +EM+ T +L+ Y G D I+K L + P
Sbjct: 475 LTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAA 534
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
MA++ G+ ++ E V + M++ +LS + L+ YA+ + + + ++
Sbjct: 535 LMASLAREGRW---QQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELE 591
Query: 327 ESG--------CHIGPLAW----------------------------DALVKLHVEGGEV 350
+S C LA+ +A++ + + G +
Sbjct: 592 KSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWI 651
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
E+A LL+ ++ + KP +Y +M Y + G + E++ MR+ G + T
Sbjct: 652 ERAVK-LLEEIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNT 710
Query: 411 LVQAY-----INAKTPAYG--IRDRMRADN 433
L+ +Y ++ +G + R+R DN
Sbjct: 711 LLYSYTKHGRMDDAARVFGDMVAARVRPDN 740
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 143/363 (39%), Gaps = 16/363 (4%)
Query: 58 FIE--RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEV 115
FIE R YAS L + L++ E + + S Y +L+ V +KA V
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTAS-----AYNSLIDAFVKAGYTQKALAV 111
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIK 172
+ M G ++ N L+ +K+ K+V V L M+ +N +Y ILID
Sbjct: 112 YRVMGQSGLRPDTYTFNVLMNAFKK--AKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
+ + +V MKS G P+ T + G +KA + +EM + L R
Sbjct: 170 CKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR 229
Query: 233 WTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
L+ G+AD A++++ S P + + G + EA +F+
Sbjct: 230 VVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
L Y L+ K L + ++ ++ E G ++AL+ + G
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR 349
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+ A ILL ++ P + Y ++D K G + ++ M+ +GY +
Sbjct: 350 IHDA-FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYN 408
Query: 410 TLV 412
TL+
Sbjct: 409 TLI 411
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P + C +E G + EAE V + K+ L + + L + YA +L K +
Sbjct: 17 PSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKSVEA 76
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+K+M C + A+++L+ V+ G +KA ++ + Q+ +P ++ ++M+ +
Sbjct: 77 LKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAV-YRVMGQSGLRPDTYTFNVLMNAFK 135
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K + S K+F M+ + L+ A
Sbjct: 136 KAKRVDSVWKLFEEMQNQNCSPNVITYSILIDA 168
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 132/326 (40%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A + KA EV M G N ++ Y + K A L
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L+D ++ T ++ ++M G++P+ +T L + Y + G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ +L M + + + + +L+ YA+ GK DQ ++ NP
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K +VE+A F++M Y +L+ K K+L+ +M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D Y G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEK-LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 533
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
K+ M VG + TL+ Y
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGY 559
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 20/280 (7%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K ++ A Y Q I E G +VY +L+ + + KA+E+ M
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFD---LMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T L Y R E A + +EME + T
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 237 LLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
++L + + ++ + ES L++ I G K N +EA +F+ + T
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 294 WKKLSTKHYT----ALLKVYADHKMLSKGKDLVKQMAESG 329
+L T+ + ALLKV + + KDL ++ +G
Sbjct: 649 DLQLETRTFNIMIGALLKVGRN----DEAKDLFAALSANG 684
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 13/194 (6%)
Query: 248 ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
AD+V LC + C A +++ A + K ++ +T LLK
Sbjct: 84 ADEVTP--NLCTYGILIGSCCCA-------GRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134
Query: 308 VYADHKMLSKGKDLV-KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL-LKAQQQNK 365
K S D+V ++M + GC +++ L+K + ++A +L +
Sbjct: 135 GLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD 194
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAY 423
P SY +++ + K GD+ +H M G + + +++ A A+ A
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 424 GIRDRMRADNVFPN 437
+ M + V PN
Sbjct: 255 EVLTSMVKNGVMPN 268
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 132/326 (40%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V Y +++A + KA EV M G N ++ Y + K A L
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + V+ +Y L+D ++ T ++ ++M G++P+ +T L + Y + G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ +L M + + + + +L+ YA+ GK DQ ++ NP
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K +VE+A F++M Y +L+ K K+L+ +M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +++++ H + G V +++ L + KP +Y ++D Y G +
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEK-LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 533
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
K+ M VG + TL+ Y
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGY 559
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 20/280 (7%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + + ++ K ++ A Y Q I E G +VY +L+ + + KA+E+ M
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 121 DKGFPVTSFACNQLLILY----KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
D+G + + N ++ + + ++ +K+ D LM + VK +Y LID +
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFD---LMVRIGVKPDIITYSTLIDGYCLAG 528
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ +++ +M S G++PD T L Y R E A + +EME + T
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588
Query: 237 LLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
++L + + ++ + ES L++ I G K N +EA +F+ + T
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 648
Query: 294 WKKLSTKHYT----ALLKVYADHKMLSKGKDLVKQMAESG 329
+L T+ + ALLKV + + KDL ++ +G
Sbjct: 649 DLQLETRTFNIMIGALLKVGRN----DEAKDLFAALSANG 684
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 13/194 (6%)
Query: 248 ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
AD+V LC + C A +++ A + K ++ +T LLK
Sbjct: 84 ADEVTP--NLCTYGILIGSCCCA-------GRLDLGFAALGNVIKKGFRVDAIAFTPLLK 134
Query: 308 VYADHKMLSKGKDLV-KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL-LKAQQQNK 365
K S D+V ++M + GC +++ L+K + ++A +L +
Sbjct: 135 GLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD 194
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAY 423
P SY +++ + K GD+ +H M G + + +++ A A+ A
Sbjct: 195 CPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAM 254
Query: 424 GIRDRMRADNVFPN 437
+ M + V PN
Sbjct: 255 EVLTSMVKNGVMPN 268
>gi|356511125|ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 503
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 20/356 (5%)
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
++ CL++ R +QK YI +Y L++ + A +F+ M++
Sbjct: 88 NWLQCLEV---FRWMQKQRWYIA-------DNGIYSKLISVMGKKGQTRMAMWLFSEMRN 137
Query: 122 KGFPVTSFACNQLLI--LYKRLDKKKVADVLLLMEK----ENVKLTQFSYKILIDIKGQS 175
G + N L+ L+ R K +A + +K E K +Y IL+ Q+
Sbjct: 138 TGCRPDTSVYNALITAHLHSRDKTKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQA 197
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
++ ++ + + + + PD T + Y G + EA+L M+ + K T
Sbjct: 198 RNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITF 257
Query: 236 RLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
LL+ Y E GK +QV + + L + I +GK ++AE VFKRM+
Sbjct: 258 NLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAEDVFKRMTD 317
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
S + +L+ +Y +S+ L ++ ES HI +A++ ++ G ++
Sbjct: 318 MGYTPSFVTHESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVYCINGLPQE 377
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
ADS+ +A K P S++ L+ Y K +K+ M + G V + F
Sbjct: 378 ADSLFERANSI-KIYPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIVPNKRFF 432
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 44/259 (16%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST-QAILAKHYVSGGRKE---KAEAML 220
Y LI + G+ + M++ G PD+S A++ H S + + KA
Sbjct: 112 YSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLHSRDKTKALAKAIGYF 171
Query: 221 KEMEG-DNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCES--NPWLDVCMAAIEAWGK 276
++M+G + K + T +LL +A+ +QV ++K L ES +P + ++A+GK
Sbjct: 172 QKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGK 231
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+ E EAV RM K + L+ Y GK KQ
Sbjct: 232 NGMIREMEAVLARMKSNQCKPDLITFNLLIDSY--------GK---KQ------------ 268
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
E G++E+ LL+++++ P F+S +L Y K E +F RM
Sbjct: 269 ---------EFGKMEQVFKSLLRSKERASL-PTFNSMIL---NYGKARLKDKAEDVFKRM 315
Query: 397 RQVGYVARFKQFQTLVQAY 415
+GY F ++L+ Y
Sbjct: 316 TDMGYTPSFVTHESLIYMY 334
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 125/296 (42%), Gaps = 5/296 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y TL++ C G+ ++A +F +MK +GF N LL ++ + + + A VL M
Sbjct: 266 TYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEM 325
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E T +Y LI + L + M +GI+PD T L + G+
Sbjct: 326 EANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKD 385
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAA 270
+ A + EM K + T L+ ++ GK ++ +++ KLC +P +
Sbjct: 386 DFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTL 445
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ +G+ + +FK M + + L+ Y+ + + K M E+G
Sbjct: 446 LAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGV 505
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
++A++ GG E+++ +L + + + KP SY ++ YA +I
Sbjct: 506 VPDLSTYNAVLAALARGGLWEQSEKVLAE-MEDGRCKPNELSYSSLLHAYANGKEI 560
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 7/256 (2%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I I G++ ++ ++ A++++G+ D L Y S GR A + +M+ D
Sbjct: 163 VIIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQD 222
Query: 227 NLKEHRWTCRLLLPLYAELGKA-DQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEE 282
T ++L +Y ++G V + + S P L I + + EE
Sbjct: 223 GCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEE 282
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A +F++M Y ALL V+ + + ++++M +G + +++L+
Sbjct: 283 AVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLIS 342
Query: 343 LHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ +GG +E+A + LK Q +K KP +Y ++ + K G ++F MR VG
Sbjct: 343 AYAKGGLLEEA--LDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGC 400
Query: 402 VARFKQFQTLVQAYIN 417
F L++ + N
Sbjct: 401 KPNICTFNALIKMHGN 416
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 133/325 (40%), Gaps = 25/325 (7%)
Query: 106 GNNVKKAE--EVFNRMKDKGFPVTSFACNQLLILYKR--LDKKKVADVLLLMEKENVKLT 161
GN K AE +VF+ +K N LL ++ + +D + V+ + M++
Sbjct: 415 GNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQ-VSGIFKEMKRAGFVAE 473
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+ ++ LI + V ++M G+ PD ST + GG E++E +L
Sbjct: 474 RDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLA 533
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNK-- 279
EME K + + LL YA GK ++ R+ E ++ ++E L K
Sbjct: 534 EMEDGRCKPNELSYSSLLHAYAN-GK--EIERMNAFAE-----EIYSGSVETHAVLLKTL 585
Query: 280 ---------VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ E E F + + A+L +Y +M++K +++ M E+
Sbjct: 586 VLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRF 645
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+++L+ ++ +K++ IL + ++ KP SY ++ Y + G +
Sbjct: 646 TPSLTTYNSLMYMYSRSENFQKSEEILREVLEKG-MKPDRISYNTVIYAYCRNGRMKEAS 704
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
+IF M+ V + T + Y
Sbjct: 705 RIFSEMKDSALVPDVVTYNTFIATY 729
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 112/272 (41%), Gaps = 14/272 (5%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y +LA G +++E+V M+D + + LL Y + K++ + E
Sbjct: 511 TYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYA--NGKEIERMNAFAE 568
Query: 155 K---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ +V+ K L+ + +S+ L ++ ++ GI PD +T + Y G
Sbjct: 569 EIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIY---G 625
Query: 212 RKE---KAEAMLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLD 265
RK+ KA +L M T L+ +Y+ K++++ R P
Sbjct: 626 RKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRI 685
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I A+ + +++EA +F M + Y + YA M ++ D+V+ M
Sbjct: 686 SYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYM 745
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ GC ++++V + + + +A+S +
Sbjct: 746 IKQGCKPDQNTYNSIVDWYCKLDQRHEANSFV 777
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
++V +VL M + Y +ID + L ++++ M S G++P+ +
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-- 261
K S R ++AE +L EM + T +L+ + + G D+V + + S+
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P + I + K ++EA + K MS K +T YT +LK ++
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L+ QM + GC P+ ++ L+ + G VE+A LLK N P SY ++D
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGL 506
Query: 381 AKRGDIHSTEKIFHRMRQVG 400
K G ++ + M G
Sbjct: 507 GKAGKTEEALELLNVMVNKG 526
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 163/425 (38%), Gaps = 53/425 (12%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
AP+I +TL Y R LA Q+SE T R
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLA--------------QMSEHGCTPDI-----RM 288
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMK 120
YA+ +D I K L+ A + ++P + VV Y T+L + K+AEE+ + M
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
K P+ N L+ + + V V+ L+E+ S+ + D+ + + G
Sbjct: 349 QKDCPLDDVTFNILVDFFCQ--NGLVDRVIELLEQ------MLSHGCMPDVITYTTVING 400
Query: 181 ------MDQVV---EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
+D+ V ++M S G +P++ + I+ K S GR AE ++ +M +
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460
Query: 232 RWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
T L+ + G +Q + K + +P L I+ GK K EEA +
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M +T Y+++ + ++K + + ++ + ++A++ +
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRW 580
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF-----------HRMR 397
E ++A N P S+Y +++ A G +++ H MR
Sbjct: 581 ETDRAID-FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMR 639
Query: 398 QVGYV 402
G V
Sbjct: 640 HFGIV 644
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
++V +VL M + Y +ID + L ++++ M S G++P+ +
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-- 261
K S R ++AE +L EM + T +L+ + + G D+V + + S+
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P + I + K ++EA + K MS K +T YT +LK ++
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L+ QM + GC P+ ++ L+ + G VE+A LLK N P SY ++D
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGL 506
Query: 381 AKRGDIHSTEKIFHRMRQVG 400
K G ++ + M G
Sbjct: 507 GKAGKTEEALELLNVMVNKG 526
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 163/425 (38%), Gaps = 53/425 (12%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
AP+I +TL Y R LA Q+SE T R
Sbjct: 248 APNIVTFNTLIGYLCRNGLFERVHEVLA--------------QMSEHGCTPDI-----RM 288
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMK 120
YA+ +D I K L+ A + ++P + VV Y T+L + K+AEE+ + M
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
K P+ N L+ + + V V+ L+E+ S+ + D+ + + G
Sbjct: 349 QKDCPLDDVTFNILVDFFCQ--NGLVDRVIELLEQ------MLSHGCMPDVITYTTVING 400
Query: 181 ------MDQVV---EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
+D+ V ++M S G +P++ + I+ K S GR AE ++ +M +
Sbjct: 401 FCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPN 460
Query: 232 RWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
T L+ + G +Q + K + +P L I+ GK K EEA +
Sbjct: 461 PVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 520
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M +T Y+++ + ++K + + ++ + ++A++ +
Sbjct: 521 VMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRW 580
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF-----------HRMR 397
E ++A N P S+Y +++ A G +++ H MR
Sbjct: 581 ETDRAID-FFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMR 639
Query: 398 QVGYV 402
G V
Sbjct: 640 HFGIV 644
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 146/345 (42%), Gaps = 20/345 (5%)
Query: 78 KAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLIL 137
K ++YI KI Y +L+ ++ + +F K+KGF +T FA N L+
Sbjct: 147 KQKNYIHKIE-------CYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRS 199
Query: 138 YKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE 194
+ L V ++L + M++ ++ + +++ L++ S + ++V E M+ I
Sbjct: 200 FGALGM--VEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIG 257
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
PD + + K Y G +KA +ME NL+ + T L+ G D +
Sbjct: 258 PDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHL 317
Query: 255 WKLCESNPWLDVCMAA----IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
++ E L++ A I K + E +VF+ M+K K + YTAL+ Y
Sbjct: 318 YQEMEER-GLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYG 376
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA-DSILLKAQQQNKFKPM 369
+ +++ +L ++M G + + +V + G +++A + + M
Sbjct: 377 KNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAM 436
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
F Y ++D K G + EK F M + G + L+ A
Sbjct: 437 F--YSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDA 479
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 97/230 (42%), Gaps = 13/230 (5%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV--ADVL 150
++ Y TL+ C + N ++ M+++G + A L+I D + V + V
Sbjct: 295 KITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHA-YSLVIGGLCKDGRTVEGSSVF 353
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M K+ K Y LID G++ ++ + E MK EG EPD T ++
Sbjct: 354 ENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKS 413
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE-----SNPWLD 265
GR ++A E DN E L LGKA +V K E P
Sbjct: 414 GRLDEAVEYF-EFCKDN--EVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDS 470
Query: 266 VCMAA-IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK-VYADHK 313
C A I+A K K+EEA +FKRM K + YT L+ ++ +H+
Sbjct: 471 YCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHR 520
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 144/375 (38%), Gaps = 46/375 (12%)
Query: 48 EWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLA 101
E ++ DF+ Y+S + + K R + KAE+++++ +P ++ Y L+
Sbjct: 244 EMVQRGIPPDFVT--YSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNW----TYNNLIY 297
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKL 160
+ K+A VF M+ + N L+ L K K+ DV M +
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
FSY I+++ L M + + M +GI P T +L K Y + G +KA +
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 417
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
EM +K + T Y + I A ++ K+
Sbjct: 418 NEMRDHGVKPNVLT-------YTTV-------------------------IAALCRIGKM 445
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
++A F +M Y L++ + H L K K+L+ ++ +G H+ + + ++
Sbjct: 446 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSI 505
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ + G V A +I P Y ++MD Y G + ++F M G
Sbjct: 506 INNLCKLGRVMDAQNIF-DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 401 YVARFKQFQTLVQAY 415
+ TLV Y
Sbjct: 565 IEPNDVVYGTLVNGY 579
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 120/294 (40%), Gaps = 20/294 (6%)
Query: 136 ILYKRL---DKKKVADVLLLMEKENVKLTQ---FSYKILIDIKGQSNDLTGMDQVVEAMK 189
IL K L K AD LL M E + +Y +ID + D+ + + M
Sbjct: 187 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 246
Query: 190 SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD 249
GI PD T + + +KAEA L++M + + WT L+ Y+ G+
Sbjct: 247 QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWK 306
Query: 250 QVARIWKLCESNPWL------DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
+ R++K L ++ M ++ +G K++EA VF M+ + Y
Sbjct: 307 EAVRVFKEMRRQSILPDVVTFNMLMGSLCKYG---KIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPL--AWDALVKLHVEGGEVEKADSILLKAQ 361
+L YA L DL M G I P+ ++ L+K + G ++KA I+
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDG--IAPVICTFNVLIKAYANCGMLDKA-MIIFNEM 420
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + KP +Y ++ + G + + F++M G + L+Q +
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 474
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 133/333 (39%), Gaps = 50/333 (15%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT----SFACNQLLILYKRLDKKKVADVLL 151
Y L+ ++ KA+E+ + + + G + S N L L + +D + + D+ +
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV 526
Query: 152 LMEKENVKL--TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
NV L T Y +L+D + +V +AM S GIEP+ L Y
Sbjct: 527 -----NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCK 581
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV-ARIWKLCESNPWLDVCM 268
GR ++ ++ +EM +K +++ E G+ + ++ ES ++ C
Sbjct: 582 IGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCT 641
Query: 269 AAIEAWG---------------------------KLN----------KVEEAEAVFKRMS 291
+I G LN +VEEA+ +F +S
Sbjct: 642 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 701
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
++ Y+ ++ ++ + +D+ M +GC + +V+ ++ E+
Sbjct: 702 RSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 761
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
+A + L K ++N F + ML++D ++ +G
Sbjct: 762 RAGAYLSKIDERN-FSLEHLTTMLLVDLFSSKG 793
>gi|12322983|gb|AAG51473.1|AC069471_4 hypothetical protein [Arabidopsis thaliana]
Length = 349
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 24/265 (9%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
+ L ++ + G DL+ A + + +L + + ALQ+SEW+ D D+AS L
Sbjct: 10 VTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLSTEDFASRL 69
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLA-NCVAGNNVKKAEEVFNRMKDKGFPV 126
L+ GL++AE + + IPE+ R + V+ TLL+ ++ +AE + M+ + +
Sbjct: 70 CLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQNMLL 129
Query: 127 TSFACNQLLILYKRLDKKKVADVLLLMEKEN-----VKLTQF----SYKILIDIKGQSND 177
+ ++ LY L +K + D +L KEN LT +Y L D++
Sbjct: 130 KPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAMEMF 189
Query: 178 LTGMDQVVEAMKSEGIEPDSS----TQAILAKHYVSGGRKEKAEAMLKEME-GDNLKEHR 232
L G++ VE EP S T +AK Y+ GG KA ML+ E + K
Sbjct: 190 LMGLE--VE-------EPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKD 240
Query: 233 WTCRLLLPLYAELGKADQVARIWKL 257
++L+ +Y + G +R+ +L
Sbjct: 241 SANKVLMMMYWDAGAKQDASRLSRL 265
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 160/376 (42%), Gaps = 12/376 (3%)
Query: 71 AKLRGLQKAESYIQKIP-ESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSF 129
KL+ Q+AE++++ + ES ++ L+ + A +F+ M KG T
Sbjct: 599 GKLKLWQQAENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVE 658
Query: 130 ACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVE 186
+ N + LI+ RLD+ V V+ ++ ++K+++ + ++++ ++ D+ + ++
Sbjct: 659 SVNGMMRALIVDGRLDELYV--VVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYN 716
Query: 187 AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
MK+ G P+ I+ R E M+ EMEG K LL +Y G
Sbjct: 717 GMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTG 776
Query: 247 KADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
D+ ++ + E+ P D I + + + EE + M K + Y
Sbjct: 777 NFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYK 836
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
LL K+ + L ++M G + + ++K++ KA+ LL A ++
Sbjct: 837 ILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEH-LLSAMKE 895
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY 423
+ +P ++ ++M Y G EK+ + ++ + T++ AY+ + +
Sbjct: 896 DGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSL 955
Query: 424 GIRD--RMRADNVFPN 437
GI M+ D V P+
Sbjct: 956 GITKLLEMKRDGVEPD 971
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 134/330 (40%), Gaps = 17/330 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-- 151
+ Y TL++ C G+N+ A VF M + N ++ ++ R K + A+++
Sbjct: 134 ITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKE 193
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
L+EK + +Y L+ + D+ +++V E + G D T + Y G
Sbjct: 194 LVEK-GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMG 252
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES------NPWLD 265
R + A + EM T +L+ LGK D+++ K+ E P L
Sbjct: 253 RLDLALGLYDEMRAIGCTPDAVTYTVLVD---SLGKMDRISEAGKVLEEMADAGLKPTLV 309
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
A I A+ K + ++AE F RM ++ K Y +L V+A K L + M
Sbjct: 310 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAM 369
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ G + L+ +G E ++ + ++ + + P+ S +LI + +G
Sbjct: 370 IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECISQG- 428
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ R GY K +++ AY
Sbjct: 429 ----ASLLKRACLQGYEPDGKSLLSILDAY 454
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 128/293 (43%), Gaps = 9/293 (3%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
++AE +F + +KGF + N LL + K D ++V V + K + +Y +
Sbjct: 185 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 244
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I + G+ L + + M++ G PD+ T +L R +A +L+EM L
Sbjct: 245 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 304
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEA 285
K T L+ YA+ G+ D R + ++ ES P + ++ + + ++ +
Sbjct: 305 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 364
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+++ M K K Y LL A + + +++ M E+ + PL +++ +
Sbjct: 365 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM-EAVFEMNPLVISSIL---I 420
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + + S+L +A Q ++P S + I+D Y K G + +RQ
Sbjct: 421 KAECISQGASLLKRACLQG-YEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQ 472
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 38/276 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
VV TLL N + EV++ + + G N L+++Y R + + LL
Sbjct: 763 VVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYE 822
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K + SYKIL+ G++ D + E M+++G + S ++ K Y +
Sbjct: 823 MGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARN 882
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
KAE +L M+ D ++ T +L+ Y G D
Sbjct: 883 HSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPD----------------------- 919
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
EAE V + + ++ST Y+ +L Y ++ S G + +M G
Sbjct: 920 ---------EAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEP 970
Query: 333 GPLAWDALVKLHVEGGEVEKADS--ILLKAQQQNKF 366
W + ++ E+ D +LLK+ Q F
Sbjct: 971 DHQVWTSFIR---AASLCEQTDDAILLLKSLQDCGF 1003
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y L+ + L + ++M S C ++A+V +H G+ ++A+ ++ K
Sbjct: 136 YNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAE-LMFKEL 194
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAK 419
+ F+P +Y ++ +AK GD+ E++ + + G+ + T++ Y +
Sbjct: 195 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRL 254
Query: 420 TPAYGIRDRMRADNVFPN 437
A G+ D MRA P+
Sbjct: 255 DLALGLYDEMRAIGCTPD 272
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+A IEA+GKL ++AE K + K + + + AL+ YA+ + + + M +
Sbjct: 592 VAMIEAYGKLKLWQQAENFVKGL-KQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIK 650
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G + + +++ + G +++ ++++ Q K S+ +L+++ +AK GD+
Sbjct: 651 KGPLPTVESVNGMMRALIVDGRLDEL-YVVVQELQDLDIKISKSTVLLMLEAFAKAGDVF 709
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
KI++ M+ GY+ ++ ++ + K
Sbjct: 710 EVMKIYNGMKAAGYLPNMHLYRIMISLLCHNK 741
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/453 (19%), Positives = 182/453 (40%), Gaps = 51/453 (11%)
Query: 38 RMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYR 97
RM+ +L++ ++ +K F E D SC + + L+ E ++ + + + R
Sbjct: 132 RMFDSSLEVFDYA---RKKGF-EIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIR 187
Query: 98 TLLANCVAGNNVKKAEEV-----FNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLL 151
V KK E V + + KGF + N LL Y + D V ++L
Sbjct: 188 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 247
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD--------------- 196
LMEK V +Y +LI+ +S+ + +++ + M +GIEPD
Sbjct: 248 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 307
Query: 197 --------------------SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ T L G + AE M+ +M+ + +R
Sbjct: 308 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 367
Query: 237 LLLPLYAELGKADQVARIWKLCESNPW-LDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
L+ Y + G D+ R+ + + + +D I A G + N+ EEA+ + M +
Sbjct: 368 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEER 427
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ ++ L+ +Y + ++ + L K M + G + ++A ++ + + G++E+A
Sbjct: 428 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 487
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
L+ Q+ P +Y ++D G++ ++F+ M Q+G + ++
Sbjct: 488 YK-LINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 546
Query: 414 AYI--NAKTPAYGIRDRMRADNVFPNKALAAQV 444
A+ + D M + + P+ + + +
Sbjct: 547 GLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSL 579
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 178/450 (39%), Gaps = 24/450 (5%)
Query: 6 ISIHS--TLTKY-AEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
IS H TL + A ++L RA+I + L + AL L W D
Sbjct: 83 ISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAAD----- 137
Query: 63 YASCLDLIAKLRGLQKAESYI------QKIPESFRGEV-VYRTLLANCVAGNNVKKAEEV 115
AS L+++ + G + + +P R +V Y T+L ++A E+
Sbjct: 138 -ASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALEL 196
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL--MEKENVKLTQFSYKILIDIKG 173
F ++ +G T N +L +Y R+ + V LL M V+ F+ +I
Sbjct: 197 FAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACC 256
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
+ + E +K+ G P T L + + G +A +L EME + +
Sbjct: 257 RDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAV 316
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRM 290
T L YA G ++ AR S L + A+G + KV+EA A+F +M
Sbjct: 317 TYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQM 376
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
KT + Y +L + + +++ +M+ SGC + W+ ++ + + G +
Sbjct: 377 KKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRG-M 435
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
E + +L+ + + +Y ++ Y + G + K+++ M G+ +
Sbjct: 436 EDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNA 495
Query: 411 LVQAYINAK--TPAYGIRDRMRADNVFPNK 438
L+ + A I +MR PN+
Sbjct: 496 LLNVLSRQGDWSTAQSIVSKMRTKGFKPNE 525
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 157/399 (39%), Gaps = 27/399 (6%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESY---------IQKIPESF--- 90
A+ +E T + F E + A CLD +A L A +Y + K+ E+
Sbjct: 315 AVTYNELAGTYARAGFFE-EAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALF 373
Query: 91 ----RGEVVYRTLLANCVAGNNVKKAE-----EVFNRMKDKGFPVTSFACNQLL-ILYKR 140
+ V N V G KK+ E+ M G N +L + KR
Sbjct: 374 DQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKR 433
Query: 141 LDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQ 200
+ V VL M V+L++ +Y LI G+ T ++ M S G P +T
Sbjct: 434 GMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTY 493
Query: 201 AILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI----WK 256
L G A++++ +M K + + LLL YA+ G +A I +
Sbjct: 494 NALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYG 553
Query: 257 LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
P + + A K +++ E F+ + + ++L +YA + M S
Sbjct: 554 SGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYS 613
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
K ++ + SG + +++L+ ++ + E +A+ IL + + KP SY +
Sbjct: 614 KATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTV 673
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
++ + K+G + +++ M G + TLV Y
Sbjct: 674 INGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGY 712
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/453 (19%), Positives = 182/453 (40%), Gaps = 51/453 (11%)
Query: 38 RMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYR 97
RM+ +L++ ++ +K F E D SC + + L+ E ++ + + + R
Sbjct: 136 RMFDSSLEVFDYA---RKKGF-EIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIR 191
Query: 98 TLLANCVAGNNVKKAEEV-----FNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLL 151
V KK E V + + KGF + N LL Y + D V ++L
Sbjct: 192 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 251
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD--------------- 196
LMEK V +Y +LI+ +S+ + +++ + M +GIEPD
Sbjct: 252 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 311
Query: 197 --------------------SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ T L G + AE M+ +M+ + +R
Sbjct: 312 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 371
Query: 237 LLLPLYAELGKADQVARIWKLCESNPW-LDVCMAAIEAWG--KLNKVEEAEAVFKRMSKT 293
L+ Y + G D+ R+ + + + +D I A G + N+ EEA+ + M +
Sbjct: 372 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEER 431
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ ++ L+ +Y + ++ + L K M + G + ++A ++ + + G++E+A
Sbjct: 432 GVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEA 491
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
L+ Q+ P +Y ++D G++ ++F+ M Q+G + ++
Sbjct: 492 YK-LINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 550
Query: 414 AYI--NAKTPAYGIRDRMRADNVFPNKALAAQV 444
A+ + D M + + P+ + + +
Sbjct: 551 GLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSL 583
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 7 MEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 66
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 67 FREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 126
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 127 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 186
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 187 IEQNVVTYNSMIMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 245
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 246 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 299
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 145/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 54 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 113
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 114 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 173
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 174 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 233
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + VE + +F+ M
Sbjct: 234 SIWGKVGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 267
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 268 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 317
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 318 AIDAGEAKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGYFPDSNVIAVVLNAY 372
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 121/281 (43%), Gaps = 16/281 (5%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+LI G+ + + ++V+ M G P+ + L + Y G R AEA+ + M+
Sbjct: 145 MLITAYGKQGNFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSS 204
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLC---ESNPW---LDVCMAAIEAWGKLNKV 280
K T +++L + E K + +++ E +P + I K
Sbjct: 205 GPKPSAVTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNY 264
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
E+A +F M++ ST Y +L+ ++K +SK D QM SG +++ L
Sbjct: 265 EKARQIFALMTQRGVPKSTVTYNSLMSFETNYKEVSKIYD---QMQRSGLQPDVISYALL 321
Query: 341 VKLHVEGGEVEKADSILLKAQQ--QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G+ + D L ++ +P +Y +++D +A G + +F MR+
Sbjct: 322 INAY---GKARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRR 378
Query: 399 VGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
Y + T++ AY+NA A +R++ D + PN
Sbjct: 379 DRYTPDLCSYTTMLSAYVNASDMAGAENFFNRLKQDGLEPN 419
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 130/315 (41%), Gaps = 48/315 (15%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDK-GFPVTSFACNQLLILY---KRLDKKKVADV 149
V Y+ +L N V GN K+AEEVF + D+ P+ +++Y K + +K +
Sbjct: 211 VTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQI 270
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
LM + V + +Y L+ + +++ ++ + M+ G++PD + A+L Y
Sbjct: 271 FALMTQRGVPKSTVTYNSLMSFETNYKEVS---KIYDQMQRSGLQPDVISYALLINAYGK 327
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
R+++A A+ +EM ++ +LL +A G
Sbjct: 328 ARREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM---------------------- 365
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
VE+A VFK M + YT +L Y + ++ ++ ++ + G
Sbjct: 366 ----------VEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFNRLKQDG 415
Query: 330 CHIGPLAWDALVKLHVEGGEV----EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ + AL+K + + + EK + + L+ + N+ + + IMD Y K D
Sbjct: 416 LEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQ-----TIFTTIMDAYGKNKD 470
Query: 386 IHSTEKIFHRMRQVG 400
S + M Q G
Sbjct: 471 FGSAVIWYKEMEQYG 485
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 133/318 (41%), Gaps = 17/318 (5%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYK 166
N AE+V + M G+ + L+ Y R + A+ + M+ K + +Y+
Sbjct: 155 NFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVTYQ 214
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSE---GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
I++ + N ++V E + E ++PD ++ + G EKA + M
Sbjct: 215 IILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALM 274
Query: 224 EGDNLKEHRWTCRLLLPL---YAELGKA-DQVARIWKLCESNPWLDVCMAA--IEAWGKL 277
+ + T L+ Y E+ K DQ+ R S DV A I A+GK
Sbjct: 275 TQRGVPKSTVTYNSLMSFETNYKEVSKIYDQMQR------SGLQPDVISYALLINAYGKA 328
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+ +EA AVF+ M + + K Y LL +A M+ + + + K M ++
Sbjct: 329 RREDEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSY 388
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
++ +V ++ A++ + +Q + +P +Y ++ YAK ++ + + M+
Sbjct: 389 TTMLSAYVNASDMAGAENFFNRLKQ-DGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQ 447
Query: 398 QVGYVARFKQFQTLVQAY 415
G A F T++ AY
Sbjct: 448 LRGVKANQTIFTTIMDAY 465
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 7/202 (3%)
Query: 242 YAELGKADQVARIWKLCESNPWLDV----CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+ +L K V++I + + W D + I A+GK AE V M+K
Sbjct: 114 FKQLKKWHLVSQILEWVRTQSWWDFNEMDSLMLITAYGKQGNFSAAEKVLSYMNKMGYVP 173
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ +TAL++ Y + + + ++M SG + + ++K VEG + ++A+ +
Sbjct: 174 NVVSHTALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVTYQIILKNFVEGNKFKEAEEVF 233
Query: 358 --LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L ++++ KP + +++ + K G+ +IF M Q G + +L+
Sbjct: 234 ETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVTYNSLMSFE 293
Query: 416 INAKTPAYGIRDRMRADNVFPN 437
N K + I D+M+ + P+
Sbjct: 294 TNYKEVS-KIYDQMQRSGLQPD 314
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 139/350 (39%), Gaps = 16/350 (4%)
Query: 76 LQKAESYIQKIPES---FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
++ A ++IQ++ F + + TL+ +VK A E+ + M +G+ + N
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 133 QLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
++ L K + K+ + L M + +Y LI + N + ++ + S+
Sbjct: 335 SVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
GI PD T L + A + +EM + +T +L+ GK D+
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 252 ARIWKLCESNPWLDVCMAA-------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
+ K E L C + I+ + K NK+ EAE +F M ++ Y
Sbjct: 455 LNMLKQME----LSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
L+ + + L+ QM G +++L+ GG+++KA I ++A N
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADI-VQAMTSN 569
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+P +Y ++ K G + K+ ++ G + ++Q
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQG 619
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 112/274 (40%), Gaps = 12/274 (4%)
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKE- 230
G+S M +++E MK+ G E +S IL + Y +++ ++ M D LK
Sbjct: 94 GRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPD 153
Query: 231 -HRWTCRLLLPLYAELGKADQVAR----IWKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
H + L L + K ++A +W + P + I+A + +++ A
Sbjct: 154 THFYNRMLNLLVDGNNLKLVEIAHAKMSVWGI---KPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+ + M K +T +++ Y + L + +QM E GC ++ + +V
Sbjct: 211 MLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFC 270
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
+ G VE A + + + Q+ F P ++ +++ K G + +I M Q GY
Sbjct: 271 KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV 330
Query: 406 KQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
+ +++ + A D+M + PN
Sbjct: 331 YTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPN 364
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 118/286 (41%), Gaps = 10/286 (3%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF---PVTSFACNQLLILYKRL-D 142
PE+ V Y TL + + NNV A E+F+ M D G V F L RL D
Sbjct: 306 PEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLD 365
Query: 143 KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
A M+K KL +Y ILI + L +++E MK G++PD T
Sbjct: 366 ACTTAAS---MKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNT 422
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-- 260
L G + +L M D + T L+ Y + GK D+ RI++ +
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEAR 482
Query: 261 -NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
P + I+ K +V+ A +F M + + Y ALLK D KM K
Sbjct: 483 IQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAF 542
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+L+ +M E C + D L++ E GE E+ + + Q++
Sbjct: 543 ELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFMQQRDQKDN 588
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 152/419 (36%), Gaps = 59/419 (14%)
Query: 71 AKLRGLQKAESYIQKIPESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSF 129
LRG+ E + S + +VV Y LL +V A +V +RM G S
Sbjct: 145 GNLRGMT--ELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPG----SD 198
Query: 130 ACNQLLILYKRLDK----KKVADVLLLMEK-----ENVKLTQFSYKILIDIKGQSNDLTG 180
C + IL +D ++ ++ +++ +Y L D + D+
Sbjct: 199 VCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGM 258
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE-------MEGDNLKE--- 230
++V M+ EG+ P+ T + GR A +E G+ +
Sbjct: 259 ACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTL 318
Query: 231 -----HRWTCRLLLPLYAELG----KADQV---ARIWKLCESNPWLDVCMAA-------- 270
H + + L+ E+ + D V I L ++ LD C A
Sbjct: 319 ASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGF 378
Query: 271 ----------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
I + + K+ EA + + M + Y LL S +
Sbjct: 379 KLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDE 438
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L+ M + GC + + LV + + G+ ++A I ++ + + +P Y ++D
Sbjct: 439 LLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIF-RSMDEARIQPNTVIYNTLIDFL 497
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
K ++ K+F MR+ A + L++ + K A+ + DRMR + PN
Sbjct: 498 CKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPN 556
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y LI+ G S + +V + M G+ PD T I+ Y SG +
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA + + M+G ++ T +++ ++LG++ Q ++ K E P +
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTF 323
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ + + ++E AVF+ M K + Y AL+ YA H M + +
Sbjct: 324 TSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKR 383
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G +++ +L+ + + KA + L +++ + KP +Y ++D Y G +
Sbjct: 384 NGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFLA 442
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+IF +M Q G TL+ A
Sbjct: 443 EAVEIFRQMEQDGTKPNVVSVCTLLAA 469
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 102/241 (42%), Gaps = 6/241 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y L+ C + N ++A EV +M D G N +L YK + K LM
Sbjct: 215 TYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE--PDSSTQAILAKHYVSGG 211
+ V+ ++ I+I + + V +M+ + E PD T + Y G
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRG 334
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
E A+ + M + LK + + L+ YA G ++ ++ + N P +
Sbjct: 335 EIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYT 394
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ + ++G+ + +A+ VF M K +K + Y AL+ Y + L++ ++ +QM +
Sbjct: 395 SLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 454
Query: 329 G 329
G
Sbjct: 455 G 455
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 112/295 (37%), Gaps = 39/295 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLL 152
V Y L+ + A VF +K G + LL Y R + K +V L+
Sbjct: 356 VSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLM 415
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS-STQAILAK------ 205
M KE K +Y LID G + L ++ M+ +G +P+ S +LA
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKK 475
Query: 206 ----------------------------HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
Y++ EKA A+ + M +K T +
Sbjct: 476 KVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTI 535
Query: 238 LLPLYAELGKADQVARIWKLCE--SNPWL-DVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + K + K E S P +V + + A+ K +V EAE++F +M
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
K YT++L Y + K +L +M +G +A AL++ +GG+
Sbjct: 596 CKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 650
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 10/296 (3%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL- 151
V Y ++ C G K+ E+F M G N LL + R + A L
Sbjct: 258 VTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFN 317
Query: 152 LMEKENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M + F+Y L+D KG DL +++ M + I P+ T + +A Y
Sbjct: 318 EMIDRGIDQDVFTYNTLLDAVCKGGQMDLA--YEIMLEMPGKKILPNVVTYSTMADGYAK 375
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM 268
GR E A + EM+ + R + LL +YA+LG+ + ++ K + S DV
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVT 435
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A ++ +GK K E VFK M K + Y+ L+ VY+ + + ++ ++
Sbjct: 436 YNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 495
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++G + + L+ + G V+ A +LL + +P +Y I+D + +
Sbjct: 496 QAGLKADVVLYSELINALCKNGLVDSA-VLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 142/358 (39%), Gaps = 10/358 (2%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKI 167
V+ A+ VF +G+ T FA + L+ Y + + V M+ +K +Y
Sbjct: 203 VELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNA 262
Query: 168 LIDIKGQSN-DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+ID G+ + + ++ E M G++PD T L GG E A + EM
Sbjct: 263 VIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR 322
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEA 283
+ + +T LL + G+ D I P + + + K ++E+A
Sbjct: 323 GIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDA 382
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
++ M L Y LL +YA + K+M SG + ++AL+
Sbjct: 383 LNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDG 442
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ + G+ + + K ++++ P +Y ++D Y+K ++F +Q G A
Sbjct: 443 YGKQGKFNEVTRVF-KEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKA 501
Query: 404 RFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
+ L+ A A + D M + + PN + +DAF ++ +E L
Sbjct: 502 DVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSI--IDAFGRSTTAEFL 557
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 136/332 (40%), Gaps = 8/332 (2%)
Query: 76 LQKAESYIQKIPESFRGE---VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
+ +A ++ +P SF + V Y +L + +++ M G P N
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFN 264
Query: 133 QLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
L+ L + ++V VL M Y ++D + L ++++ M S
Sbjct: 265 TLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSY 324
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
G++P+ + K S R E+AE +L EM ++ T +L+ + + G +V
Sbjct: 325 GLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRV 384
Query: 252 ARIW-KLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
+ ++ E DV I + K ++EA + K M+ + +T YT +LK
Sbjct: 385 IELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKG 444
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ +DL+ QM E GC P+ ++ ++ + G VE+A LLK N P
Sbjct: 445 LCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIE-LLKQMLLNGCSP 503
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
SY ++D K G ++ + M G
Sbjct: 504 DLISYSTVIDGLGKAGKTDEALELLNVMVNKG 535
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 157/382 (41%), Gaps = 9/382 (2%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLA 101
AL W E K + Y + ++ + K++ + S + ++ + + +
Sbjct: 140 ALSFFTWAEKQKGFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKLLNKDTFALISR 199
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKL 160
V++A E F RM++ GF + + N+LL L K +K V M+K
Sbjct: 200 RHARARKVEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVP 259
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY IL++ G+ ++L +D+V MK +G EPD T IL Y + + A +
Sbjct: 260 DIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELF 319
Query: 221 KEMEGDNLK--EHRWTCRLLLPLYAE--LGKADQVARIWKLCESNPWLDVCMAAIEAWGK 276
EME N K H + C L+ L +E L +A + +K C P + + A+
Sbjct: 320 HEMEAKNCKPTPHVY-CTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCW 378
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA-ESGCHIGPL 335
++++A V M K +++ Y +L + ++ ++M+ E GC
Sbjct: 379 SMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVS 438
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
++ +V++ V+ A + + + + P Y ++ + + K F
Sbjct: 439 TYEIIVRMFCNEDRVDLAKQVWDQMKAKGVL-PGMHMYSDLITSLCHKNKLGEACKYFQE 497
Query: 396 MRQVGYVARFKQFQTLVQAYIN 417
M G K F L QA ++
Sbjct: 498 MLDAGIRPPAKMFSNLKQALLD 519
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A IEA GK+ + + ++ M K+ K L+ + + + +A + + + + ++M E
Sbjct: 162 ALIEALGKIKQFKLIRSLVNEM-KSRKLLNKDTFALISRRHARARKVEEAIEAFERMEEF 220
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + ++ L+ + VEKA+ + K +++ +F P SY ++++ + K ++
Sbjct: 221 GFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKR-RFVPDIKSYTILLEGWGKEHNLLR 279
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
++++ M+ G+ + L+ AY AK A + M A N P
Sbjct: 280 LDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPT 330
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 180/456 (39%), Gaps = 55/456 (12%)
Query: 38 RMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV--- 94
+M+G+AL+ E +E K ER SCL + LR + +S ++ +V
Sbjct: 173 KMFGEALEAFEHME-KKGFHIDER---SCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVT 228
Query: 95 VYR--TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLL 151
VY +L +V+ ++ + + KG N + Y KRLD VA++L
Sbjct: 229 VYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT 288
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE----------------- 194
LMEKE V +Y +LI + ++ E M+ +GIE
Sbjct: 289 LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSG 348
Query: 195 ------------------PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
P + T L G+ E A+ ++ EM+G + +
Sbjct: 349 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 408
Query: 237 LLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
L+ Y E G D+ R+ K ES+ + +A+ KLN+ +EA+ + M
Sbjct: 409 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIAS--GLCKLNRKDEAKGLLFSMV 466
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ +T +T L+ +Y + K + ++M E G + ++ L+ + + G ++
Sbjct: 467 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 526
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+A + + + + +++ LI + G + K+F M Q G V + +
Sbjct: 527 EAHKLKDELENRGLIPDVYTCTSLIHGECID-GKVDMALKLFDEMPQRGLVPNVVTYTAM 585
Query: 412 VQAYI--NAKTPAYGIRDRMRADNVFPNKALAAQVA 445
+ A+ + D M+ + P+ + + +
Sbjct: 586 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K K + L +VYAD+KM + + + M + G HI + + GG+V DS
Sbjct: 156 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQV---DS 212
Query: 356 ILLKAQQQNKFKPMFSSYML--IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
L ++ + Y L ++D KRGD+ K+ + G A + ++
Sbjct: 213 CLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIE 272
Query: 414 AYI 416
Y
Sbjct: 273 GYF 275
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 119/324 (36%), Gaps = 38/324 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V+Y TL+ + + A V M+++G +F N L+I + K A LL
Sbjct: 456 VIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLE 515
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
EN G +PD+ T Y+ G
Sbjct: 516 MVEN----------------------------------GFKPDAFTYGAFISGYIEAGEF 541
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCMAAIE 272
A+ +KEM + ++ C L+ Y + GK + ++ + E D +
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601
Query: 273 AWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
G K KV +AE +F M Y L+ ++ + K + +M ++G
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ ++ L+ GE+EKA LL F P +Y I+D Y K GD+
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKE-LLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAF 720
Query: 391 KIFHRMRQVGYVARFKQFQTLVQA 414
++F M+ G V + TLV
Sbjct: 721 QLFDEMKLKGLVPDSFVYTTLVDG 744
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 132/361 (36%), Gaps = 64/361 (17%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +D +KL +QKA S ++ ++ ++Y LL ++KA+E+ + M
Sbjct: 633 YGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS 692
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
KGFP + +Y +ID +S DL
Sbjct: 693 GKGFPPNAV----------------------------------TYCTIIDGYCKSGDLAE 718
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
Q+ + MK +G+ PDS L E+A + + E L+
Sbjct: 719 AFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNE-KGCASSSAPFNALIN 777
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV---------------EEAEA 285
+ GK + + N +D + + +GK N V E A+
Sbjct: 778 WVFKFGKTELTTDMI-----NRLMD---GSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKE 829
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+F M K + YT+LL Y S+ + ++ +G + + ++ +
Sbjct: 830 LFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFL 889
Query: 346 EGGEVEKA----DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G KA D + K + K S+ ++ +AK G++ EK+ M ++ Y
Sbjct: 890 KEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKY 949
Query: 402 V 402
+
Sbjct: 950 I 950
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 47/256 (18%), Positives = 99/256 (38%), Gaps = 33/256 (12%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
SY +LID + L ++ M S G+ D+ +IL + G + A ++ EM
Sbjct: 282 SYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEM 341
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
H ++ ++ Y +C+ + E +E+A
Sbjct: 342 -----VSHGFSIDPMMYDYF----------------------ICVMSKEG-----AMEKA 369
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+A+F M + Y +L++ + K + KG +L+ ++ + I P + VK
Sbjct: 370 KALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKG 429
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
G+++ A +I +K + +P Y ++ + ++ ++ MR+ G
Sbjct: 430 MCSSGDLDGAYNI-VKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAP 488
Query: 404 RFKQFQTLVQAYINAK 419
+ +L+ AK
Sbjct: 489 DTFCYNSLIIGLSKAK 504
>gi|226533082|ref|NP_001141414.1| uncharacterized protein LOC100273524 [Zea mays]
gi|194704512|gb|ACF86340.1| unknown [Zea mays]
Length = 637
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 157/376 (41%), Gaps = 15/376 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL----ILYKRLDKKKVADV 149
+ + L+ V + +A F +MK G T+ N L+ I+ K + ++V D+
Sbjct: 138 IFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDM 197
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
+ + LT +Y IL+ +L VV M++ G EPD T +A Y +
Sbjct: 198 MGVEGSVRPNLT--TYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYAN 255
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLDV 266
+AE ++ E++ ++ T +++ Y G+ ++ R K S P + +
Sbjct: 256 NDETWRAEELIVEIQ-TRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVI 314
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
++ + N + + M K K Y+ L ++ ++K + +M
Sbjct: 315 FNTLLKGFLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMI 374
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
E+G P + L K V + EKA+ +LL+ P ++ ++ + D+
Sbjct: 375 EAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSHLG-LCPNVVTFTTVISGWCSVADM 433
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQV 444
S +++ +M + G + F+T + Y K P A + MR V P ++ +
Sbjct: 434 ESAMRVYDKMCKSGVYPNLRTFETPIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLI 493
Query: 445 AQVDAFRKTAVSELLD 460
A DA++ ++E ++
Sbjct: 494 A--DAWKAVGLTENIN 507
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 5/230 (2%)
Query: 78 KAESYIQKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI 136
+AE I +I R E + ++ +++A +MKD G N LL
Sbjct: 261 RAEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLK 320
Query: 137 LY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
+ D V +L LMEK +K +Y ++ + V + M GIEP
Sbjct: 321 GFLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEP 380
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
D +ILAK +V + EKAE +L +M L + T ++ + + + R++
Sbjct: 381 DPQVYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVY 440
Query: 256 -KLCESNPWLDVCMAAIEAWGKLNKVE--EAEAVFKRMSKTWKKLSTKHY 302
K+C+S + ++ WG + + +AE V + M +T K Y
Sbjct: 441 DKMCKSGVYPNLRTFETPIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTY 490
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K +A +VFK + K S YT LL + +M L+ ++ +G + ++
Sbjct: 82 KPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFN 141
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
AL+ VE + +A + K + + P S++ ++ Y G ++++F M
Sbjct: 142 ALINAFVEAKRMGEAINTFWK-MKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGV 200
Query: 399 VGYV-ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
G V + LV+A+ + + A+G+ +M+A P+
Sbjct: 201 EGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPD 242
>gi|186478941|ref|NP_174121.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332192779|gb|AEE30900.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 388
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 24/265 (9%)
Query: 8 IHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCL 67
+ L ++ + G DL+ A + + +L + + ALQ+SEW+ D D+AS L
Sbjct: 49 VTPPLDEWLKRGKDLNPAVLRGLINSLCESQRFNHALQVSEWITKRGIFDLSTEDFASRL 108
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLA-NCVAGNNVKKAEEVFNRMKDKGFPV 126
L+ GL++AE + + IPE+ R + V+ TLL+ ++ +AE + M+ + +
Sbjct: 109 CLVEISTGLKEAEKFFKSIPENMRDDSVHTTLLSLYTISKKTRHEAEATYQTMRVQNMLL 168
Query: 127 TSFACNQLLILYKRLDKKKVADVLLLMEKEN-----VKLTQF----SYKILIDIKGQSND 177
+ ++ LY L +K + D +L KEN LT +Y L D++
Sbjct: 169 KPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAMEMF 228
Query: 178 LTGMDQVVEAMKSEGIEPDSS----TQAILAKHYVSGGRKEKAEAMLKEME-GDNLKEHR 232
L G++ VE EP S T +AK Y+ GG KA ML+ E + K
Sbjct: 229 LMGLE--VE-------EPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKD 279
Query: 233 WTCRLLLPLYAELGKADQVARIWKL 257
++L+ +Y + G +R+ +L
Sbjct: 280 SANKVLMMMYWDAGAKQDASRLSRL 304
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 163/386 (42%), Gaps = 17/386 (4%)
Query: 42 KALQLSEWLETNKKL--DFIERDYASCLDLIAKLRGLQKAESYIQK----IP-ESFRGEV 94
KAL L EW N + + I+R ++L+ ++ G + + K IP + + +V
Sbjct: 166 KALLLFEWSVLNLGIANEKIDR---HAIELMVRILGRESQHTVASKLFDVIPLDDYVLDV 222
Query: 95 -VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK--KVADVLL 151
Y T+L +A E+F RM + G + N +L +Y ++ + K+ ++L
Sbjct: 223 RAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLD 282
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + +F+ ++ G+ + + +KSEG +P + T L + G
Sbjct: 283 EMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAG 342
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
+A ++L EME +N T ++ Y G ++ A + S P
Sbjct: 343 IFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYT 402
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I A+G++ +++A +F +M + + Y A+L + + + ++ M +
Sbjct: 403 TIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLN 462
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
GC + W+ ++ + + G + K + + + + F+P ++ ++ Y + G +
Sbjct: 463 GCSPNHITWNTMLAMCGKKG-MHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNND 521
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQA 414
K+ M + G+ + L+ A
Sbjct: 522 AAKMHEEMIKAGFSPCINTYNALLNA 547
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 130/329 (39%), Gaps = 44/329 (13%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
+ + T+LA C K +VF MK+ GF N L+ Y R A
Sbjct: 468 HITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDA---AK 524
Query: 153 MEKENVKLTQFS-----YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
M +E +K FS Y L++ + D + V+ M+++G P ++ +++ Y
Sbjct: 525 MHEEMIK-AGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSY 583
Query: 208 VSGGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV 266
GG + E + K + +GD + P W L +
Sbjct: 584 AKGGNVKGIEMIEKSIYDGD-----------IFP-------------SWMLLRT------ 613
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ A K + E F+ + K K ++L ++A + M + ++++ +
Sbjct: 614 ---LVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIH 670
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
++G + ++L+ ++ GG+ KA+ + L+ Q + KP SY ++ + ++G +
Sbjct: 671 DAGLQPDLVTHNSLMDMYARGGDCWKAEEV-LRMLQTSGGKPDLVSYNTVIKGFCRKGLM 729
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+I M +G + T + Y
Sbjct: 730 QEGIRILSEMTSIGVGPCIFTYNTFISGY 758
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 150/374 (40%), Gaps = 16/374 (4%)
Query: 38 RMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFR-GEVV 95
R + K L+L + + + + LDF E ++ L + + +A + + E ++ G V
Sbjct: 272 RSWDKILELLDEMRS-RGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVT 330
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLME 154
Y LL +A V + M++ P + N+++ Y R ++ A V+ M
Sbjct: 331 YNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMA 390
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST-QAILAKHYVSGGRK 213
+ + +Y +I+ G+ D+ ++ + M G P+ +T A+L G+K
Sbjct: 391 SKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGML----GKK 446
Query: 214 EKAEAMLK---EMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVC 267
+E M+K M+ + + T +L + + G +QV R K C P D
Sbjct: 447 SLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTF 506
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
I A+G+ +A + + M K Y ALL A + ++ M
Sbjct: 507 NTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRN 566
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G ++ +V + +GG V+ + I + F L++ + R +
Sbjct: 567 KGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCR-SLT 625
Query: 388 STEKIFHRMRQVGY 401
E+ F +++ GY
Sbjct: 626 GMERAFQALQKHGY 639
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 155 KENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
K N++ + ++Y +L K +DL G Q+ E MKS+G+ P++ L + G+
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAG--QMFECMKSDGVSPNNRLLGFLVSSFAEKGK 153
Query: 213 KEKAEAMLK---EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
A A+L E+EG C ++ L L K D+V KL + + C
Sbjct: 154 LHFATALLLQSFEVEG--------CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND 205
Query: 270 A------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
I + K E+A + MS + Y L++ + L+K ++ K
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 324 QM-AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+ + S C + + +++ + + G++ +A S LL + P ++ +++D YAK
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASS-LLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
G++ + E+I +M G F +L+ Y + G R + M A +FPN
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 120/261 (45%), Gaps = 5/261 (1%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI-EPDSSTQAI 202
+K ++L +M + +Y LI +SN+L ++ + +KS + PD T
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESN 261
+ Y G+ +A ++L +M + T +L+ YA+ G+ I K+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 262 PWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
+ DV + I+ + ++ +V + +++ M+ + Y+ L+ + L K +
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
+L+ Q+A P ++ ++ + G+V +A+ ++++ ++ K KP ++ +++
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN-VIVEEMEKKKCKPDKITFTILIIG 461
Query: 380 YAKRGDIHSTEKIFHRMRQVG 400
+ +G + IFH+M +G
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIG 482
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 157/393 (39%), Gaps = 57/393 (14%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD--------- 62
++ +AE+G + A A+ L++ + G + ++ L T KLD +E
Sbjct: 145 VSSFAEKG----KLHFATALL-LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR 199
Query: 63 YASCLD------LIAKLRGLQKAESYIQ--KIPESFRGE---VVYRTLLANCVAGNNVKK 111
+ SC D LI L G+ KAE ++ + F E V Y TL+ N + K
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 112 AEEVFNRMKDKGFP---VTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKI 167
A E+F +K V ++ ++ Y + K + A LL M + + T ++ +
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYT--SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
L+D ++ ++ +++ M S G PD T L Y G+ + + +EM
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 228 LKEHRWTCRLLL-------------PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAW 274
+ + +T +L+ L +L D + + + NP I+ +
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY---NP-------VIDGF 427
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K KV EA + + M K K +T L+ + + + + +M GC
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 335 LAWDALVKLHVEGGEVEKA---DSILLKAQQQN 364
+ +L+ ++ G ++A + I K Q N
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNN 520
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 10/296 (3%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL- 151
V Y ++ C G K+ E+F M G N LL + R + A L
Sbjct: 258 VTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFN 317
Query: 152 LMEKENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M + F+Y L+D KG DL +++ M + I P+ T + +A Y
Sbjct: 318 EMIDRGIDQDVFTYNTLLDAVCKGGQMDLA--YEIMLEMPGKKILPNVVTYSTMADGYAK 375
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM 268
GR E A + EM+ + R + LL +YA+LG+ + ++ K + S DV
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVT 435
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A ++ +GK K E VFK M K + Y+ L+ VY+ + + ++ ++
Sbjct: 436 YNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 495
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++G + + L+ + G V+ A +LL + +P +Y I+D + +
Sbjct: 496 QAGLKADVVLYSELINALCKNGLVDSA-VLLLDEMTKEGIRPNVVTYNSIIDAFGR 550
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 142/358 (39%), Gaps = 10/358 (2%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKI 167
V+ A+ VF +G+ T FA + L+ Y + + V M+ +K +Y
Sbjct: 203 VELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNA 262
Query: 168 LIDIKGQSN-DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+ID G+ + + ++ E M G++PD T L GG E A + EM
Sbjct: 263 VIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDR 322
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEA 283
+ + +T LL + G+ D I P + + + K ++E+A
Sbjct: 323 GIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDA 382
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
++ M L Y LL +YA + K+M SG + ++AL+
Sbjct: 383 LNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDG 442
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ + G+ + + K ++++ P +Y ++D Y+K ++F +Q G A
Sbjct: 443 YGKQGKFNEVTRVF-KEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKA 501
Query: 404 RFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
+ L+ A A + D M + + PN + +DAF ++ +E L
Sbjct: 502 DVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSI--IDAFGRSTTAEFL 557
>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rubella]
Length = 440
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 132/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 41 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 100
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 101 FREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 160
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L+ +EA+ +F M K + S + LL+VY D ++ + L + M
Sbjct: 161 MIDVYGQLSMAKEADKLFWGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKN 220
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 221 IEQTVVTYNSMIMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 279
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 280 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 333
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 99/236 (41%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYS 54
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE KL +A ++F R+ ++ Y
Sbjct: 55 NL-------------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 89
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 90 AMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREI 149
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + +K+F MR++G F TL++ Y +A+
Sbjct: 150 KCLLDLTTCNIMI-DVYGQLSMAKEADKLFWGMRKMGIEPSVVSFNTLLRVYGDAE 204
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/267 (19%), Positives = 110/267 (41%), Gaps = 43/267 (16%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 88 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 147
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL----------------------------- 151
+ + CN ++ +Y +L K AD L
Sbjct: 148 EIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGMRKMGIEPSVVSFNTLLRVYGDAELFG 207
Query: 152 -------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
LM+++N++ T +Y +I I G++ + + +++ M+S GIEP+S T + +
Sbjct: 208 EAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 267
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNP 262
+ G+ ++A + +++ ++ + + ++ Y G R+ + N
Sbjct: 268 SIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNI 327
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKR 289
D + + G ++EEA VF++
Sbjct: 328 PRDTAIHILAGAG---RIEEATYVFRQ 351
>gi|125528270|gb|EAY76384.1| hypothetical protein OsI_04314 [Oryza sativa Indica Group]
Length = 665
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 18/339 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+ Y LL + ++ A + M+D+G +F+ + LL R A L L
Sbjct: 129 IPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPL 188
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMK-SEGIEPD-SSTQAILAKHYVSG 210
ME + V + LI + + D + ++ + GI+PD + A +A + S
Sbjct: 189 MEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSD 248
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCESNPWLDV 266
++ +L +M D + + +L A G+ ++ + P L V
Sbjct: 249 LLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLSV 308
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ A+G+L+ EA+ +F M + S Y +L+VY D + + L M
Sbjct: 309 FNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMR 368
Query: 327 ES--------GCHIGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
+ G I P + ++ ++ ++ + E EKA S L++ Q N +P +Y I
Sbjct: 369 SAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGS-LVQDMQANGIQPNAITYSTI 427
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + K G + K+F ++R+ G +QT+V AY
Sbjct: 428 LSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAY 466
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 131/355 (36%), Gaps = 49/355 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDK-GFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V++ L+ + G + KA +F+R++ G A N + Y + D + A+ LLL
Sbjct: 199 VLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLL 258
Query: 153 --MEKENVKLTQFSYK-ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M + V SY IL + + L + ++PD S I+ Y
Sbjct: 259 HDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLSVFNIVLNAYGQ 318
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--------- 260
+A+ + M + T +L +Y + G + ++ L S
Sbjct: 319 LDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRG 378
Query: 261 ----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
P + I +GK + E+A ++ + M + + Y+ +L ++ L
Sbjct: 379 GSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLD 438
Query: 317 KGKDLVKQMAESGCHIGPLAWDALV-------------------------------KLHV 345
+ L +++ E+G I P+ + +V K+
Sbjct: 439 RAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETAIKILA 498
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
G VE+A + +A + S Y +++D +AK S ++F MR+ G
Sbjct: 499 NAGRVEEAAWLFRRAADAGDVRDT-SVYRMMIDLFAKSRRHRSVIEVFDEMRKAG 552
>gi|115440859|ref|NP_001044709.1| Os01g0833000 [Oryza sativa Japonica Group]
gi|20805252|dbj|BAB92918.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113534240|dbj|BAF06623.1| Os01g0833000 [Oryza sativa Japonica Group]
Length = 665
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 18/339 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+ Y LL + ++ A + M+D+G +F+ + LL R A L L
Sbjct: 129 IPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPL 188
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMK-SEGIEPD-SSTQAILAKHYVSG 210
ME + V + LI + + D + ++ + GI+PD + A +A + S
Sbjct: 189 MEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSD 248
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCESNPWLDV 266
++ +L +M D + + +L A G+ ++ + P L V
Sbjct: 249 LLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSV 308
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ A+G+L+ EA+ +F M + S Y +L+VY D + + L M
Sbjct: 309 FNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMR 368
Query: 327 ES--------GCHIGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
+ G I P + ++ ++ ++ + E EKA S L++ Q N +P +Y I
Sbjct: 369 SAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGS-LVQDMQANGIQPNAITYSTI 427
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + K G + K+F ++R+ G +QT+V AY
Sbjct: 428 LSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAY 466
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 131/355 (36%), Gaps = 49/355 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDK-GFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V++ L+ + G + KA +F+R++ G A N + Y + D + A+ LLL
Sbjct: 199 VLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLL 258
Query: 153 --MEKENVKLTQFSYK-ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M + V SY IL + + L + ++PD S I+ Y
Sbjct: 259 HDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQ 318
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--------- 260
+A+ + M + T +L +Y + G + ++ L S
Sbjct: 319 LDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRG 378
Query: 261 ----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
P + I +GK + E+A ++ + M + + Y+ +L ++ L
Sbjct: 379 GSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLD 438
Query: 317 KGKDLVKQMAESGCHIGPLAWDALV-------------------------------KLHV 345
+ L +++ E+G I P+ + +V K+
Sbjct: 439 RAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETAIKILA 498
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
G VE+A + +A + S Y +++D +AK S ++F MR+ G
Sbjct: 499 NAGRVEEAAWLFRRAADAGDVRDT-SVYRMMIDLFAKSRRHRSVIEVFDEMRKAG 552
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 135/360 (37%), Gaps = 44/360 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y S + + K R + KAE+++++ +P ++ Y L+ + K+A VF
Sbjct: 260 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNW----TYNNLIYGYSSTGQWKEAVRVF 315
Query: 117 NRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ + L+ L K K+ DV M + FSY I+++
Sbjct: 316 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 375
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L M + + M +GI PD T +L K Y + G +KA + EM +K T
Sbjct: 376 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 435
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
R I A ++ K+++A F +M
Sbjct: 436 R--------------------------------TVIAALCRIGKMDDAMEKFNQMIDQGV 463
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
Y L++ + H L K K+L+ ++ +G H+ + + +++ + G V A +
Sbjct: 464 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 523
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
I P Y ++MD Y G + ++F M G + TLV Y
Sbjct: 524 IF-DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 582
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 138/344 (40%), Gaps = 18/344 (5%)
Query: 89 SFRGEVVYRTLLANCVAGNNV-------KKAEE----VFNRMKDKGFPVTSFACNQLLIL 137
+F G+++ L N + N++ K+ +E + +R + G F+ + LL
Sbjct: 135 AFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKS 194
Query: 138 YKRLDKKKVADVLLLMEKENVKLTQ---FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE 194
K AD LL M E + +Y +ID + D+ + + M GI
Sbjct: 195 LCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 254
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
PD T + +KAEA L++M + + WT L+ Y+ G+ + R+
Sbjct: 255 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 314
Query: 255 WKLCESNPWL-DVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
+K + L DV + + + K K++EA VF M+ + Y +L YA
Sbjct: 315 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 374
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
L DL M G ++ L+K + G ++KA I+ + + KP
Sbjct: 375 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA-MIIFNEMRDHGVKPDVV 433
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+Y ++ + G + + F++M G + L+Q +
Sbjct: 434 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 477
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 113/276 (40%), Gaps = 14/276 (5%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT----SFACNQLLILYKRLDKKKVADVLL 151
Y L+ ++ KA+E+ + + + G + S N L L + +D + + D+ +
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 529
Query: 152 LMEKENVKL--TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
NV L Y +L+D + +V +AM S GIEP+ L Y
Sbjct: 530 -----NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCK 584
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV-ARIWKLCESNPWLDVCM 268
GR ++ ++ +EM +K +++ E G+ + ++ ES +D+C
Sbjct: 585 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICT 644
Query: 269 AAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
I G K +EA +FK + K++ ++ + + + KDL ++
Sbjct: 645 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 704
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
S + + ++ ++ G VE+A+ + Q
Sbjct: 705 RSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 740
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 131/297 (44%), Gaps = 11/297 (3%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKI 167
+A EV+ M + G + + L++ + + K+ V VL L ME VK +SY I
Sbjct: 196 EAMEVYKAMVEDGISPSVRTYSVLMVSFGK--KRDVDTVLWLLNEMEARGVKPNVYSYTI 253
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
I + GQ+ Q++ M+ G +PD T ++ + GR A+ + +M+ +
Sbjct: 254 CIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASD 313
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAE 284
K R T LL + G + V IW ++ + D + A ++A ++ +++EA
Sbjct: 314 QKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEAL 373
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
AVF M + Y +L+ + M + +L M + C P + ++ ++
Sbjct: 374 AVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHM--NACGPSPNGYTHVLFIN 431
Query: 345 VEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
G + +I ++K P ++ ++ A+ G + +++F+ ++ +G
Sbjct: 432 YYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMG 488
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 133/320 (41%), Gaps = 8/320 (2%)
Query: 86 IPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK 143
+ + + +V T + + C G + +A VF+ MK+KG ++ N L+ + + D
Sbjct: 345 VADGYNDNIVSYTAVVDALCQVGR-LDEALAVFDEMKEKGISPEQYSYNSLISGFLKADM 403
Query: 144 -KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
+ ++ M +++ + I+ G+S Q E MKS+GI PD +
Sbjct: 404 FDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANA 463
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN 261
+ GR A+ + E++ + T +++ ++ KAD+ + + E+
Sbjct: 464 VLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETG 523
Query: 262 PWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
DV + I+ K K EA +F ++ + + + Y LL + +
Sbjct: 524 CVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVM 583
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
L+++M S + ++ ++ + GEV A +L ++ P SSY +M
Sbjct: 584 HLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKG-CTPDLSSYNTVMYG 642
Query: 380 YAKRGDIHSTEKIFHRMRQV 399
K ++F +M+++
Sbjct: 643 LIKEERFEEAFRMFCQMKKI 662
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/322 (17%), Positives = 119/322 (36%), Gaps = 38/322 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y TLL C + + E++N M G+
Sbjct: 319 VTYITLLDKCGDSGDSQSVMEIWNAMVADGY----------------------------- 349
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+N+ SY ++D Q L V + MK +GI P+ + L ++
Sbjct: 350 -NDNI----VSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMF 404
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAA 270
++A + M + +T L + Y + G++ + + ++ +S P + A
Sbjct: 405 DRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAV 464
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ + + ++ A+ VF + T YT ++K + + + M E+GC
Sbjct: 465 LSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGC 524
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
LA ++L+ +GG+ +A + + ++ K +P +Y ++ + G +
Sbjct: 525 VPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEM-KIEPTNGTYNTLLSGLGREGKVKEVM 583
Query: 391 KIFHRMRQVGYVARFKQFQTLV 412
+ M + + T++
Sbjct: 584 HLLEEMTHSIHPPNLITYNTVL 605
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 125/309 (40%), Gaps = 26/309 (8%)
Query: 41 GKALQLSEWLETNKKLD--FIERDYASCLDLIAKL----RGLQKAESYIQKIPESFR-GE 93
GK++++ E L ++ E Y + +I+ L R Q + Y + E F
Sbjct: 819 GKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTP 878
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
Y LL + + AE +FN M + G N LL ++ + + V +
Sbjct: 879 CTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEK 938
Query: 153 MEKENVKLTQFSYKILIDI---KGQSND-LTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
M ++ + SY +LID G+ ND L+ Q++E G+EPD +L
Sbjct: 939 MVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLEL----GLEPDLIIYNLLIDGLG 994
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LD 265
R E+A + EM+ + + +T L+ + GKA + A++++ W +
Sbjct: 995 KSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVF 1054
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
A I + + A A + ++ + TAL+ D +++ + L +M
Sbjct: 1055 TYNALIRGYSVSGSTDNAYAAYDCVA-----VGVSLKTALISGLVDENLINIAEGLFAEM 1109
Query: 326 AESGCHIGP 334
GC GP
Sbjct: 1110 KRRGC--GP 1116
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 56/312 (17%), Positives = 120/312 (38%), Gaps = 11/312 (3%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILI 169
+A ++FN+ K G + + + N L+ + +A D+ M++ +F+Y +++
Sbjct: 756 EAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLIL 815
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D G+S + M +V M +G E T + V R E+A + + +
Sbjct: 816 DAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFS 875
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWL-DVCMAAIEAWGKLNKVEEA 283
T LL + GK ++ C+ N + ++ + G V +
Sbjct: 876 PTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQ- 934
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F++M + K YT L+ L+ G +Q+ E G + ++ L+
Sbjct: 935 --IFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDG 992
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ +E+A L ++ P +Y ++ K G +++ + G+
Sbjct: 993 LGKSERIEEA-VCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKP 1051
Query: 404 RFKQFQTLVQAY 415
+ L++ Y
Sbjct: 1052 NVFTYNALIRGY 1063
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 135/360 (37%), Gaps = 44/360 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y S + + K R + KAE+++++ +P ++ Y L+ + K+A VF
Sbjct: 257 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNW----TYNNLIYGYSSTGQWKEAVRVF 312
Query: 117 NRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ + L+ L K K+ DV M + FSY I+++
Sbjct: 313 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 372
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L M + + M +GI PD T +L K Y + G +KA + EM +K T
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
R I A ++ K+++A F +M
Sbjct: 433 R--------------------------------TVIAALCRIGKMDDAMEKFNQMIDQGV 460
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
Y L++ + H L K K+L+ ++ +G H+ + + +++ + G V A +
Sbjct: 461 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
I P Y ++MD Y G + ++F M G + TLV Y
Sbjct: 521 IF-DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 579
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 138/344 (40%), Gaps = 18/344 (5%)
Query: 89 SFRGEVVYRTLLANCVAGNNV-------KKAEE----VFNRMKDKGFPVTSFACNQLLIL 137
+F G+++ L N + N++ K+ +E + +R + G F+ + LL
Sbjct: 132 AFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKS 191
Query: 138 YKRLDKKKVADVLLLMEKENVKLTQ---FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE 194
K AD LL M E + +Y +ID + D+ + + M GI
Sbjct: 192 LCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 251
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
PD T + +KAEA L++M + + WT L+ Y+ G+ + R+
Sbjct: 252 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 311
Query: 255 WKLCESNPWL-DVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
+K + L DV + + + K K++EA VF M+ + Y +L YA
Sbjct: 312 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 371
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
L DL M G ++ L+K + G ++KA I+ + + KP
Sbjct: 372 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA-MIIFNEMRDHGVKPDVV 430
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+Y ++ + G + + F++M G + L+Q +
Sbjct: 431 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 474
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 113/276 (40%), Gaps = 14/276 (5%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT----SFACNQLLILYKRLDKKKVADVLL 151
Y L+ ++ KA+E+ + + + G + S N L L + +D + + D+ +
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526
Query: 152 LMEKENVKL--TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
NV L Y +L+D + +V +AM S GIEP+ L Y
Sbjct: 527 -----NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 581
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV-ARIWKLCESNPWLDVCM 268
GR ++ ++ +EM +K +++ + G+ + ++ ES +D+C
Sbjct: 582 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICT 641
Query: 269 AAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
I G K +EA +FK + K++ ++ + + + KDL ++
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 701
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
S + + ++ ++ G VE+A+ + Q
Sbjct: 702 RSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 139/339 (41%), Gaps = 21/339 (6%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
VY +L C+ + AE + RM G P+ F+ N ++ LY R + A V M
Sbjct: 182 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 241
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E + VK ++ LI + + Q++ M G+ PD T L Y G
Sbjct: 242 ENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDL 301
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD--VCMAA 270
E+A + EME + T +L E GK +V + ++ E D C
Sbjct: 302 EEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTL 361
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+ K + A V +RM ++ +L Y AL+ + K L + K+ + +M +G
Sbjct: 362 INAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG- 420
Query: 331 HIGP----LAWDALVKLHVEGGEVEKADSILLKA----QQQNKFKPMFSSYMLIMDQYAK 382
P L+W + G K +++ + A + F P + Y ++ + K
Sbjct: 421 -FSPNYSVLSW-------IVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCK 472
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+G I +F+ M+ G A + TL AY+ A P
Sbjct: 473 KGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKP 511
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 180/456 (39%), Gaps = 55/456 (12%)
Query: 38 RMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV--- 94
+M+G+AL+ E +E K ER SCL + LR + +S ++ +V
Sbjct: 169 KMFGEALEAFEHME-KKGFHIDER---SCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVT 224
Query: 95 VYR--TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLL 151
VY +L +V+ ++ + + KG N + Y KRLD VA++L
Sbjct: 225 VYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT 284
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE----------------- 194
LMEKE V +Y +LI + ++ E M+ +GIE
Sbjct: 285 LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSG 344
Query: 195 ------------------PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
P + T L G+ E A+ ++ EM+G + +
Sbjct: 345 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 404
Query: 237 LLLPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
L+ Y E G D+ R+ K ES+ + +A+ KLN+ +EA+ + M
Sbjct: 405 TLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIAS--GLCKLNRKDEAKGLLFSMV 462
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ +T +T L+ +Y + K + ++M E G + ++ L+ + + G ++
Sbjct: 463 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 522
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+A + + + + +++ LI + G + K+F M Q G V + +
Sbjct: 523 EAHKLKDELENRGLIPDVYTCTSLIHGECID-GKVDMALKLFDEMPQRGLVPNVVTYTAM 581
Query: 412 VQAYI--NAKTPAYGIRDRMRADNVFPNKALAAQVA 445
+ A+ + D M+ + P+ + + +
Sbjct: 582 ISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K K + L +VYAD+KM + + + M + G HI + + GG+V DS
Sbjct: 152 KFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQV---DS 208
Query: 356 ILLKAQQQNKFKPMFSSYML--IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
L ++ + Y L ++D KRGD+ K+ + G A + ++
Sbjct: 209 CLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIE 268
Query: 414 AYI 416
Y
Sbjct: 269 GYF 271
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 12/297 (4%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL- 151
V Y ++ C G KK E+F+ M G N LL + R + A L
Sbjct: 261 VTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFS 320
Query: 152 LMEKENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M + + F+Y L+D KG DL +++ M ++ I P+ T + + Y
Sbjct: 321 AMVDKGIDQDIFTYNTLLDAVCKGGQMDLAF--EIMSEMPTKNILPNVVTYSTMIDGYAK 378
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL--DVC 267
GR + A M EM+ + R + LL +YA+LG+ +Q + K E N + DV
Sbjct: 379 VGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEME-NAGIRKDVV 437
Query: 268 M--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
A + +GK + +E VF+ M + + Y+ L+ VY+ + + ++ ++
Sbjct: 438 TYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREF 497
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++G + + AL+ + G VE + + LL + +P +Y I+D + +
Sbjct: 498 KQAGLKADVVLYSALIDALCKNGLVESSVT-LLDEMTKEGIRPNVVTYNSIIDAFGR 553
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 149/360 (41%), Gaps = 14/360 (3%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKI 167
V+ A+ VF+ +G+ T +A + L+ Y R + V M+ + +Y
Sbjct: 206 VELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNA 265
Query: 168 LIDIKGQSN-DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
+ID G+ + + ++ + M S G++PD T L GG E A + M
Sbjct: 266 VIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDK 325
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEA 283
+ + +T LL + G+ D I + P + I+ + K+ ++++A
Sbjct: 326 GIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDA 385
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F M L Y LL VYA + D+ K+M +G + ++AL+
Sbjct: 386 LNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAG 445
Query: 344 HVEGGEVEKADSI--LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G+ + D + + + ++ + P +Y ++D Y+K G ++F +Q G
Sbjct: 446 Y---GKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGL 502
Query: 402 VARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
A + L+ A + + D M + + PN + +DAF ++A ++ +
Sbjct: 503 KADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSI--IDAFGRSASAQCV 560
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 4/188 (2%)
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I G+L KVE A+AVF K + ++AL+ Y ++ + M +
Sbjct: 195 AMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSN 254
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + ++A++ +GG K + N +P ++ ++ ++ G +
Sbjct: 255 GLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEA 314
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
++F M G + TL+ A A+ I M N+ PN +
Sbjct: 315 ARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPN--VVTYSTM 372
Query: 447 VDAFRKTA 454
+D + K
Sbjct: 373 IDGYAKVG 380
>gi|414886512|tpg|DAA62526.1| TPA: hypothetical protein ZEAMMB73_338715 [Zea mays]
Length = 901
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 157/381 (41%), Gaps = 17/381 (4%)
Query: 49 WLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI--------PESFRGE---VVYR 97
W + ++DF++ D + +DL ++ L A+ Y KI PE R V Y
Sbjct: 211 WCDGRFEVDFLDLDCIT-VDLDGPMQFLL-ADMYDDKIAAPAAGVAPERPRKPKLVVTYN 268
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKE 156
L+ +K A ++F M G ++ N L+ ++ A+VL M
Sbjct: 269 VLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEVLFASMVIR 328
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
VK +Y +++ + DL G+ + +++ G+ PD+ T IL + KA
Sbjct: 329 GVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAVTYRILLQVLCERKMVHKA 388
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ-VARIWKLCESNPWLDVCMAAI-EAW 274
E +++ + H + +++ +Y +LG D+ +A K C +AI + +
Sbjct: 389 EDVIEGILKAGSFVHEQSLPVVMKMYVDLGLLDEAIAFFEKHCRGKGVSSKNFSAIMDVF 448
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
EEAE +F + Y ++K Y K + L + M ESG
Sbjct: 449 AGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDRVSSLFESMEESGVPSDE 508
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+++L+++ GG +A +L K + F+P +Y I+ Y++ + +F+
Sbjct: 509 CTYNSLIQMFSFGGFPHRAKKLLGKMKDAG-FEPKCETYSAIIRSYSRHCLVPEAIDLFN 567
Query: 395 RMRQVGYVARFKQFQTLVQAY 415
M+ G + L+ +
Sbjct: 568 EMKASGVEPNVIVYGILIDMF 588
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 36/257 (14%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y +LID+ G++ L + M + G+ PD+ T L + G +AE + M
Sbjct: 266 TYNVLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEVLFASM 325
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
+K T +++ ++A +G + V + + C+ N
Sbjct: 326 VIRGVKPDTKTYNVMMTVFASIGDLEGVLKYY--CQIR----------------NAGLHP 367
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+AV R+ LL+V + KM+ K +D+++ + ++G + + ++K+
Sbjct: 368 DAVTYRI--------------LLQVLCERKMVHKAEDVIEGILKAGSFVHEQSLPVVMKM 413
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFS-SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+V+ G +++A + ++ + K + S ++ IMD +A RG E IF R G
Sbjct: 414 YVDLGLLDEAIAFF---EKHCRGKGVSSKNFSAIMDVFAGRGLWEEAEHIFCSERGDGNE 470
Query: 403 ARFKQFQTLVQAYINAK 419
++ +++AY AK
Sbjct: 471 KDIVEYNVMIKAYGQAK 487
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 111/255 (43%), Gaps = 5/255 (1%)
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+V+ + ME+ V + +Y LI + +++ MK G EP T + +
Sbjct: 491 RVSSLFESMEESGVPSDECTYNSLIQMFSFGGFPHRAKKLLGKMKDAGFEPKCETYSAII 550
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---N 261
+ Y +A + EM+ ++ + +L+ ++AE G + L E +
Sbjct: 551 RSYSRHCLVPEAIDLFNEMKASGVEPNVIVYGILIDMFAETGNVKEALHYSNLLEQSGIS 610
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P V + I+A+ K N +EA+ ++ RM+ A+L +YA +M+++ K++
Sbjct: 611 PNHIVLTSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAMLNLYAKLEMVTEAKEI 670
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ + H +++ + L+ G + ++ I K Q+ +S +M Y
Sbjct: 671 FDSLRRNN-HADAVSYTTMAYLYKSIGLLSESIRITHKLQKSGLLSDC-ASCNAVMACYG 728
Query: 382 KRGDIHSTEKIFHRM 396
+G++ ++ H+M
Sbjct: 729 AKGNLRDCAELVHQM 743
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 146/340 (42%), Gaps = 19/340 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYK 166
+KA VF+ M G T + N + LI+ RLD+ V V+ ++ + K+++ +
Sbjct: 797 EKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYV--VVGELQDMDFKISKSTVL 854
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPD----SSTQAILAKHYVSGGRKEKAEAMLKE 222
+++D ++ D+ + ++ MK+ G P+ S ++L H R E M+ E
Sbjct: 855 LMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHH----NRFRDVELMIAE 910
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN--PWLDVCMAAIEAWGKLNK 279
MEG K LL +Y G D+ ++++ + E+ P D I + + +
Sbjct: 911 MEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLR 970
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
EE + M K + Y +LL A ++ + L ++M + +
Sbjct: 971 PEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHM 1030
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
++K++ G KA++ LL +++ +P ++ ++M Y G H E + + ++
Sbjct: 1031 MMKIYRNAGNHSKAEN-LLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSS 1089
Query: 400 GYVARFKQFQTLVQAYINAKTPAYGIRD--RMRADNVFPN 437
+ T+ AY+ GI+ M+ D V P+
Sbjct: 1090 SLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPD 1129
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 10/241 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y +LL NV K E + GF N ++ +Y ++ + +A V L
Sbjct: 364 VTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLA-VGLYD 422
Query: 154 EKENVKLTQ--FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
E V T +Y ++ID G+ + + +V+E M G++P + L Y GG
Sbjct: 423 EMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGG 482
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
R+ AE M +K R ++L ++A G+ +++ R+++ ++ P D+
Sbjct: 483 RRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQ 542
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ A K +K EE E + + M + T L+K + +S+G L+K+
Sbjct: 543 VLLVALAKEDKCEEIEEIIQDMELLCQMSLGVISTILIKA----RCVSQGGKLLKKACLQ 598
Query: 329 G 329
G
Sbjct: 599 G 599
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 11/296 (3%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILID 170
AEEVF R +G V F N ++ +Y R + A LL M + S+ LI+
Sbjct: 207 AEEVFLRFAGEGATVQVF--NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLIN 264
Query: 171 IKGQSNDL---TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+ +S L +D + E +S G+ PD T L E A + +EM
Sbjct: 265 ARSKSGCLAAGVALDLLFEVRQS-GLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASE 323
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKLNKVEEAE 284
+ WT ++ ++ GKA++ R++ +L E D + + A+ K V++ E
Sbjct: 324 CRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVE 383
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+ + K K + Y ++ +Y L L +M GC + + ++
Sbjct: 384 HTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSL 443
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ ++ +A + L+ KP ++ ++ YAK G EK F M G
Sbjct: 444 GKMDKIAEAGKV-LEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASG 498
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 117/306 (38%), Gaps = 38/306 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y TL++ C +N++ A VF M + C L
Sbjct: 294 ITYNTLISACSQSSNLEDAVTVFEEM-------IASECRPDL------------------ 328
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
++Y ++ + G+ +++ + +G PD+ T L + G
Sbjct: 329 ---------WTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNV 379
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAA 270
+K E +E+ K++ T ++ +Y ++G+ D ++ + P
Sbjct: 380 DKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVM 439
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I++ GK++K+ EA V + M+ K + ++AL+ YA + + M SG
Sbjct: 440 IDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGV 499
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
LA+ ++ + GE EK L + + ++P Y +++ AK E
Sbjct: 500 KPDRLAYLVMLDVFARSGETEKMLR-LYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIE 558
Query: 391 KIFHRM 396
+I M
Sbjct: 559 EIIQDM 564
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 71/161 (44%), Gaps = 1/161 (0%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LM 153
++ +LL A N + +V+ + + G N L+++Y R + + LL M
Sbjct: 922 IFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEM 981
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
K + SYK L+ ++ DQ+ E M+S+ + + S ++ K Y + G
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNH 1041
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
KAE +L M+ D ++ T +L+ Y G+ + +
Sbjct: 1042 SKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENV 1082
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y L+ + L + ++M S C ++A+V +H G+ E+A+ + +
Sbjct: 296 YNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELV 355
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAK 419
++ F P +Y ++ +AK G++ E + + G+ + T++ Y +
Sbjct: 356 EKG-FMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRL 414
Query: 420 TPAYGIRDRMRADNVFPN 437
A G+ D MRA P+
Sbjct: 415 DLAVGLYDEMRAVGCTPD 432
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
E Y TL+ ++ + N M +G + LL + + ++ AD L
Sbjct: 955 EDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFE 1014
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M ++ +L + Y +++ I + + + + ++ MK +GIEP +T IL Y + G
Sbjct: 1015 EMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAG 1074
Query: 212 RKEKAEAMLKEMEGDNLK 229
+ +AE +L ++ +L+
Sbjct: 1075 QPHEAENVLNSLKSSSLE 1092
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 157/372 (42%), Gaps = 11/372 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y ++ +L+ QKAES + +S V+ L+ A ++A VFN M
Sbjct: 783 YVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMM 842
Query: 121 DKGFPVTSFACN---QLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
G T + N Q LI+ RL++ V V+ ++ K+++ S +++D ++ +
Sbjct: 843 KDGPSPTVDSINGLLQALIVDGRLEELYV--VVQELQDIGFKISKSSILLMLDAFARAGN 900
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + ++ MK+ G P ++A+ G + EAML EME K
Sbjct: 901 IFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNS 960
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+L +Y + + +I++ + + P D I + + ++ +E + M
Sbjct: 961 VLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVG 1020
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y +L+ + +++ + ++L +++ +GC + + ++K++ G KA
Sbjct: 1021 LEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQ 1080
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L + +P ++ L+M Y G EK+ +++ + +++ A
Sbjct: 1081 R-LFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDA 1139
Query: 415 YINAKTPAYGIR 426
Y+ GI+
Sbjct: 1140 YVRNGDYNAGIQ 1151
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 122/309 (39%), Gaps = 38/309 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y TL++ C +N+++A VF+ M + C L
Sbjct: 329 ITYNTLISACSRASNLEEAVNVFDDM-------VAHHCEPDL------------------ 363
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
++Y +I + G+ +Q+ ++S G PD+ + + G
Sbjct: 364 ---------WTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNV 414
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD---QVARIWKLCESNPWLDVCMAA 270
EK + + +EM + T ++ +Y + G+ D Q+ R K NP +
Sbjct: 415 EKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVL 474
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I++ GK NK+EEA + M T K + + Y+AL+ YA + ++ M SG
Sbjct: 475 IDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGT 534
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
LA+ ++ +H+ E ++A + K + P S Y L++ +
Sbjct: 535 RPDQLAYSVMLDIHLRFNEPKRAMT-FYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIG 593
Query: 391 KIFHRMRQV 399
++ M +V
Sbjct: 594 RVVRDMEEV 602
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 21/255 (8%)
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW----LDVCMAA 270
+A + +M +K + ++ LY ++G + + L E++ + V +
Sbjct: 727 EASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDV 786
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
IEA+G+L ++AE+V M ++ ++ K + AL++ YA + + + M + G
Sbjct: 787 IEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGP 846
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + L++ + G +E+ ++++ Q FK SS +L++D +A+ G+I +
Sbjct: 847 SPTVDSINGLLQALIVDGRLEEL-YVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVK 905
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRD-----------RMRADNVFPNKA 439
KI+H M+ GY ++ + Q K +RD + D N
Sbjct: 906 KIYHGMKAAGYFPSMHLYRVMAQLLCRGKQ----VRDVEAMLSEMEEAGFKPDLSIWNSV 961
Query: 440 LAAQVAQVDAFRKTA 454
L VA +D FRKT
Sbjct: 962 LKMYVA-IDDFRKTT 975
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 112/252 (44%), Gaps = 4/252 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
+YR + G V+ E + + M++ GF N +L +Y +D +K + +
Sbjct: 922 LYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRI 981
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+++ ++ + +Y ILI + + + +++ M++ G+EP T L +
Sbjct: 982 KEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLV 1041
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAA 270
E+AE + +E++ K R +++ +Y G + R++ + + P +
Sbjct: 1042 EQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEPTIATMHLL 1101
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ ++G + +EAE V + +T LST Y++++ Y + + G +KQ+ E G
Sbjct: 1102 MVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQVKEEGL 1161
Query: 331 HIGPLAWDALVK 342
W ++
Sbjct: 1162 EPDHRIWTCFIR 1173
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 102/269 (37%), Gaps = 37/269 (13%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILI 169
KAE++FN ++ +GF + + N L + R + +KV D+ M K + +Y +I
Sbjct: 381 KAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMI 440
Query: 170 DIKGQS--NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+ G+ NDL Q+ MKS G PD T +L + E+A M+ EM
Sbjct: 441 HMYGKQGQNDLAL--QLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTG 498
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
+K P L A I + K K EAE F
Sbjct: 499 VK--------------------------------PTLRTYSALICGYAKAGKPVEAEETF 526
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
M ++ + Y+ +L ++ + K+M G ++ +++
Sbjct: 527 DCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNA 586
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLI 376
+VE ++ ++ P SY+L+
Sbjct: 587 NKVEDIGRVVRDMEEVCGMNPQAISYILV 615
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 130/352 (36%), Gaps = 38/352 (10%)
Query: 90 FRGE-VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD 148
F G ++ L+ C+ +A +VF+ M+ G + +++LY ++ + A
Sbjct: 705 FTGSFTMFEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAH 764
Query: 149 VLL-LMEKENVKLTQFS-YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
L+ L E + L S Y +I+ G+ + V M+ I + L +
Sbjct: 765 HLIDLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEA 824
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV 266
Y + G E+A A+ M D +P +D
Sbjct: 825 YAASGCYERARAVFNTMMKDG--------------------------------PSPTVDS 852
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
++A ++EE V + + K+S +L +A + + K + M
Sbjct: 853 INGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMK 912
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
+G + + +L G +V +++L + ++ FKP S + ++ Y D
Sbjct: 913 AAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAG-FKPDLSIWNSVLKMYVAIDDF 971
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG--IRDRMRADNVFP 436
T +I+ R+++ G + L+ Y P G + D MR + P
Sbjct: 972 RKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEP 1023
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK N+ A VF R + + + K Y A++ VYA +K ++L M E GC
Sbjct: 233 GKANQEPLAVEVFTRAEPSVEN-TVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDL 291
Query: 335 LAWDALVKLHVEGGEVEKADSI-LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
++++ L+ ++ GE+ +I LL +++ +P +Y ++ ++ ++ +F
Sbjct: 292 VSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVF 351
Query: 394 HRM 396
M
Sbjct: 352 DDM 354
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 130/297 (43%), Gaps = 11/297 (3%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKI 167
+A EV+ M + G + + L++ + + K+ V VL L ME VK +SY I
Sbjct: 189 EAMEVYKAMVEDGISPSVRTYSVLMVAFGK--KRDVDTVLWLLNEMEARGVKPNVYSYTI 246
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
I + GQ+ ++ M+ G +PD T ++ + GR A+A+ +M+ +
Sbjct: 247 CIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASD 306
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAE 284
K R T LL + G + V +W ++ + D + A ++A ++ +V+EA
Sbjct: 307 QKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEAL 366
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
AVF M + Y +L+ + M + +L M + C P + ++ ++
Sbjct: 367 AVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHM--NACGPSPNGYTHVLFIN 424
Query: 345 VEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
G + +I ++K P ++ ++ A G + +++F+ ++ +G
Sbjct: 425 YYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMG 481
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 127/303 (41%), Gaps = 6/303 (1%)
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVK 159
A C G V +A VF+ MK+KG ++ N L+ + + D + ++ M
Sbjct: 355 ALCQVGR-VDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPS 413
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
+++ + I+ G+S Q E MKS+GI PD + + GR A+ +
Sbjct: 414 PNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRV 473
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGK 276
E++ + T +++ ++ KAD+ + + ES DV + I+ K
Sbjct: 474 FYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYK 533
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
K EA +F ++ + + + Y LL + + L+++M + +
Sbjct: 534 GGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLIT 593
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
++ ++ + GEV A +L ++ P SSY +M K + ++F +M
Sbjct: 594 YNTVLDCLSKNGEVNCAIDMLYSMTEKG-CAPDLSSYNTVMYGLIKEERLEEAFRMFCQM 652
Query: 397 RQV 399
+++
Sbjct: 653 KKI 655
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 65/345 (18%), Positives = 135/345 (39%), Gaps = 13/345 (3%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILI 169
+A ++FN+ K G + + + N L+ + +A D+ M++ +F+Y +++
Sbjct: 749 EAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLIL 808
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D G+S + M +V + M +G E T + V R E+A + + +
Sbjct: 809 DAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFS 868
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWL-DVCMAAIEAWGKLNKVEEA 283
T LL + GK ++ CE N + ++ + G V +
Sbjct: 869 PTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQ- 927
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F++M + K YT L+ L+ G +Q+ E G + ++ L+
Sbjct: 928 --LFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDG 985
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ +E+A S L ++ P +Y ++ K G +++ + + G+
Sbjct: 986 LGKSERIEEAVS-LFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKP 1044
Query: 404 RFKQFQTLVQAY-INAKTP-AYGIRDRMRADNVFPNKALAAQVAQ 446
+ L++ Y ++ T AY +M PN + Q+
Sbjct: 1045 SVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPN 1089
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 157/384 (40%), Gaps = 15/384 (3%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIP--ESFRGEV-VYRT 98
KAL++ EW+ + AS L ++ L A + + ES+ +V Y +
Sbjct: 20 KALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTS 79
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDK-KKVADVLLLMEKE 156
L++ + +F M+ +G + N +L LY KR D ++ + M+
Sbjct: 80 LISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDL 139
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+ ++Y +I Q++ ++ + MK G P+ T L Y GG ++A
Sbjct: 140 EISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEA 199
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK------LCESNPWLDVCMAA 270
+L EME + + T L+ YA G D+ A + K LC C
Sbjct: 200 SELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDE--FTYC-TL 256
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+ + + E+A F M KT + Y L+ +Y + L + K M E C
Sbjct: 257 ISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNC 316
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ W++L+K G + + ++ + ++ + P ++ ++++ Y + G + +
Sbjct: 317 TPDLVTWNSLLKSFGNCGMLTEVSNV-FREMKRAGYMPGVDTFNILIECYGRCGYVDYSV 375
Query: 391 KIFHRMRQVGYVARFKQFQTLVQA 414
I+ + + G F L+ +
Sbjct: 376 DIYKGLLRTGLQPTVPTFAALMAS 399
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 155/399 (38%), Gaps = 54/399 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y L+A +A + + KG F L+ + R ++ +K +
Sbjct: 216 VTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTE 275
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K N +Y ILIDI G+ L M +V + M+ + PD T L K + + G
Sbjct: 276 MRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGM 335
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK------LCESNPWLDV 266
+ + +EM+ T +L+ Y G D I+K L + P
Sbjct: 336 LTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAA 395
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
MA++ G+ ++ E V + M++ +LS + L+ YA+ + + + ++
Sbjct: 396 LMASLAREGRW---QQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELE 452
Query: 327 ESG--------CHIGPLAW----------------------------DALVKLHVEGGEV 350
+S C LA+ +A++ + + G +
Sbjct: 453 KSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWI 512
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
E+A LL+ ++ + KP +Y +M Y + G H E++ MR+ G + T
Sbjct: 513 ERAVK-LLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNT 571
Query: 411 LVQAY-----INAKTPAYG--IRDRMRADNVFPNKALAA 442
L+ +Y ++ +G + R+R DN N + +
Sbjct: 572 LLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGS 610
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 25/297 (8%)
Query: 155 KENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
K N++ + ++Y +L K +DL G Q+ E MKS+G+ P++ L + G+
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGLHDLAG--QMFECMKSDGVSPNNRLLGFLVSSFAEKGK 153
Query: 213 KEKAEAMLK---EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
A A+L E+EG C ++ L L K D+V KL + + C
Sbjct: 154 LHFATALLLQSFEVEG--------CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND 205
Query: 270 A------IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
I + K E+A + MS + Y L++ + L+K ++ K
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 324 QM-AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+ + S C + + +++ + + G++ +A S LL + P ++ +++D YAK
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASS-LLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
G++ + E+I +M G F +L+ Y + G R + M A +FPN
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 120/261 (45%), Gaps = 5/261 (1%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI-EPDSSTQAI 202
+K ++L +M + +Y LI +SN+L ++ + +KS + PD T
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESN 261
+ Y G+ +A ++L +M + T +L+ YA+ G+ I K+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 262 PWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
+ DV + I+ + ++ +V + +++ M+ + Y+ L+ + L K +
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
+L+ Q+A P ++ ++ + G+V +A+ ++++ ++ K KP ++ +++
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAN-VIVEEMEKKKCKPDKITFTILIIG 461
Query: 380 YAKRGDIHSTEKIFHRMRQVG 400
+ +G + IFH+M +G
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIG 482
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 158/397 (39%), Gaps = 57/397 (14%)
Query: 12 LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD--------- 62
++ +AE+G + A A+ L++ + G + ++ L T KLD +E
Sbjct: 145 VSSFAEKG----KLHFATALL-LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLR 199
Query: 63 YASCLD------LIAKLRGLQKAESYIQ--KIPESFRGE---VVYRTLLANCVAGNNVKK 111
+ SC D LI L G+ KAE ++ + F E V Y TL+ N + K
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 112 AEEVFNRMKDKGFP---VTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKI 167
A E+F +K V ++ ++ Y + K + A LL M + + T ++ +
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYT--SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNV 317
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
L+D ++ ++ +++ M S G PD T L Y G+ + + +EM
Sbjct: 318 LVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 228 LKEHRWTCRLLL-------------PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAW 274
+ + +T +L+ L +L D + + + NP I+ +
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMY---NP-------VIDGF 427
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K KV EA + + M K K +T L+ + + + + +M GC
Sbjct: 428 CKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDK 487
Query: 335 LAWDALVKLHVEGGEVEKA---DSILLKAQQQNKFKP 368
+ +L+ ++ G ++A + I K Q N P
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPP 524
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 131/322 (40%), Gaps = 36/322 (11%)
Query: 95 VYRTLLANCVAGNN-VKKAEEVFNRMKDKG-FPVTSFACNQLLILYKRLDKKKVADVLLL 152
Y T++ NC+ N +++A+ + N+M D G P T+ ++ L ++ D+
Sbjct: 338 TYSTVI-NCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARE 396
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ + + +++ ILI+ + D ++ E MKS G PD T IL + S G+
Sbjct: 397 LTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK 456
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
KA +LKEME + T + I+
Sbjct: 457 LAKALDLLKEMEVSGCPQSTVTYNTI--------------------------------ID 484
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
K ++EEAE VF +M T + + L+ + + + +LV QM G
Sbjct: 485 GLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQP 544
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ +++++ + + G + KA I L+ N F+ +Y +++ K + K+
Sbjct: 545 NNVTYNSILTHYCKQGNISKAADI-LQTMTANGFEVDVVTYATLINGLCKARRTQAALKL 603
Query: 393 FHRMRQVGYVARFKQFQTLVQA 414
MR G K + ++Q+
Sbjct: 604 LRGMRMKGMKPTPKAYNPVIQS 625
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/251 (19%), Positives = 98/251 (39%), Gaps = 4/251 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + ++ ++ +ID ++ ++E M S + PD +T L + +V G
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESN--PWLDVCMA 269
E A + M T +L+ Y +LG+ D + I + P
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ + V+ A V M + + Y+ ++ ++ L + K +V QM +SG
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
C ++ L+ ++E+A L + P ++ ++++ K GD H
Sbjct: 367 CLPDTTTFNTLIVALCTENQLEEALD-LARELTVKGLSPNVYTFNILINALCKVGDPHLA 425
Query: 390 EKIFHRMRQVG 400
++F M+ G
Sbjct: 426 VRLFEEMKSSG 436
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 135/360 (37%), Gaps = 44/360 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y S + + K R + KAE+++++ +P ++ Y L+ + K+A VF
Sbjct: 270 YNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNW----TYNNLIYGYSSTGQWKEAVRVF 325
Query: 117 NRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ + L+ L K K+ DV M + FSY I+++
Sbjct: 326 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 385
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L M + + M +GI PD T +L K Y + G +KA + EM +K T
Sbjct: 386 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 445
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
R I A ++ K+++A F +M
Sbjct: 446 R--------------------------------TVIAALCRIGKMDDAMEKFNQMIDQGV 473
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
Y L++ + H L K K+L+ ++ +G H+ + + +++ + G V A +
Sbjct: 474 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 533
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
I P Y ++MD Y G + ++F M G + TLV Y
Sbjct: 534 IF-DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 592
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 138/344 (40%), Gaps = 18/344 (5%)
Query: 89 SFRGEVVYRTLLANCVAGNNV-------KKAEE----VFNRMKDKGFPVTSFACNQLLIL 137
+F G+++ L N + N++ K+ +E + +R + G F+ + LL
Sbjct: 145 AFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKS 204
Query: 138 YKRLDKKKVADVLLLMEKENVKLTQ---FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE 194
K AD LL M E + +Y +ID + D+ + + M GI
Sbjct: 205 LCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIP 264
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
PD T + +KAEA L++M + + WT L+ Y+ G+ + R+
Sbjct: 265 PDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRV 324
Query: 255 WKLCESNPWL-DVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
+K + L DV + + + K K++EA VF M+ + Y +L YA
Sbjct: 325 FKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYAT 384
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
L DL M G ++ L+K + G ++KA I+ + + KP
Sbjct: 385 KGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA-MIIFNEMRDHGVKPDVV 443
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+Y ++ + G + + F++M G + L+Q +
Sbjct: 444 TYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 487
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 113/276 (40%), Gaps = 14/276 (5%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT----SFACNQLLILYKRLDKKKVADVLL 151
Y L+ ++ KA+E+ + + + G + S N L L + +D + + D+ +
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 539
Query: 152 LMEKENVKL--TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
NV L Y +L+D + +V +AM S GIEP+ L Y
Sbjct: 540 -----NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCK 594
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV-ARIWKLCESNPWLDVCM 268
GR ++ ++ +EM +K +++ + G+ + ++ ES +D+C
Sbjct: 595 IGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICT 654
Query: 269 AAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
I G K +EA +FK + K++ ++ + + + KDL ++
Sbjct: 655 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 714
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
S + + ++ ++ G VE+A+ + Q
Sbjct: 715 RSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQN 750
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 160/376 (42%), Gaps = 12/376 (3%)
Query: 71 AKLRGLQKAESYIQKIP-ESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSF 129
KL+ Q+AE++++ + ES ++ L+ + A +F+ M KG T
Sbjct: 759 GKLKLWQQAENFVKGLKQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVE 818
Query: 130 ACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVE 186
+ N + LI+ RLD+ V V+ ++ ++K+++ + ++++ ++ D+ + ++
Sbjct: 819 SVNGMMRALIVDGRLDELYV--VVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYN 876
Query: 187 AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
MK+ G P+ I+ R E M+ EMEG K LL +Y G
Sbjct: 877 GMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTG 936
Query: 247 KADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
D+ ++ + E+ P D I + + + EE + M K + Y
Sbjct: 937 NFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYK 996
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
LL K+ + L ++M G + + ++K++ KA+ LL A ++
Sbjct: 997 ILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEH-LLSAMKE 1055
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY 423
+ +P ++ ++M Y G EK+ + ++ + T++ AY+ + +
Sbjct: 1056 DGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSL 1115
Query: 424 GIRD--RMRADNVFPN 437
GI M+ D V P+
Sbjct: 1116 GITKLLEMKRDGVEPD 1131
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 134/330 (40%), Gaps = 17/330 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-- 151
+ Y TL++ C G+N+ A VF M + N ++ ++ R K + A+++
Sbjct: 294 ITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKE 353
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
L+EK + +Y L+ + D+ +++V E + G D T + Y G
Sbjct: 354 LVEK-GFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMG 412
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES------NPWLD 265
R + A + EM T +L+ LGK D+++ K+ E P L
Sbjct: 413 RLDLALGLYDEMRAIGCTPDAVTYTVLV---DSLGKMDRISEAGKVLEEMADAGLKPTLV 469
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
A I A+ K + ++AE F RM ++ K Y +L V+A K L + M
Sbjct: 470 TFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAM 529
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ G + L+ +G E ++ + ++ + + P+ S +LI + +G
Sbjct: 530 IKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECISQG- 588
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ R GY K +++ AY
Sbjct: 589 ----ASLLKRACLQGYEPDGKSLLSILDAY 614
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 128/293 (43%), Gaps = 9/293 (3%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
++AE +F + +KGF + N LL + K D ++V V + K + +Y +
Sbjct: 345 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 404
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I + G+ L + + M++ G PD+ T +L R +A +L+EM L
Sbjct: 405 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 464
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEA 285
K T L+ YA+ G+ D R + ++ ES P + ++ + + ++ +
Sbjct: 465 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 524
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+++ M K K Y LL A + + +++ M E+ + PL +++ +
Sbjct: 525 LYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM-EAVFEMNPLVISSIL---I 580
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + + S+L +A Q ++P S + I+D Y K G + +RQ
Sbjct: 581 KAECISQGASLLKRACLQG-YEPDGKSLLSILDAYEKMGKHEKGLSLLEWIRQ 632
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 38/276 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
VV TLL N + EV++ + + G N L+++Y R + + LL
Sbjct: 923 VVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYE 982
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K + SYKIL+ G++ D + E M+++G + S ++ K Y +
Sbjct: 983 MGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARN 1042
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
KAE +L M+ D ++ T +L+ Y G D
Sbjct: 1043 HSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPD----------------------- 1079
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
EAE V + + ++ST Y+ +L Y ++ S G + +M G
Sbjct: 1080 ---------EAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEP 1130
Query: 333 GPLAWDALVKLHVEGGEVEKADS--ILLKAQQQNKF 366
W + ++ E+ D +LLK+ Q F
Sbjct: 1131 DHQVWTSFIR---AASLCEQTDDAILLLKSLQDCGF 1163
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y L+ + L + ++M S C ++A+V +H G+ ++A+ ++ K
Sbjct: 296 YNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAE-LMFKEL 354
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAK 419
+ F+P +Y ++ +AK GD+ E++ + + G+ + T++ Y +
Sbjct: 355 VEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRL 414
Query: 420 TPAYGIRDRMRADNVFPN 437
A G+ D MRA P+
Sbjct: 415 DLALGLYDEMRAIGCTPD 432
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+A IEA+GKL ++AE K + K + + + AL+ YA+ + + + M +
Sbjct: 752 VAMIEAYGKLKLWQQAENFVKGL-KQESGVDRRIWNALIHAYAESGLYEHARAIFDIMIK 810
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G + + +++ + G +++ ++++ Q K S+ +L+++ +AK GD+
Sbjct: 811 KGPLPTVESVNGMMRALIVDGRLDEL-YVVVQELQDLDIKISKSTVLLMLEAFAKAGDVF 869
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
KI++ M+ GY+ ++ ++ + K
Sbjct: 870 EVMKIYNGMKAAGYLPNMHLYRIMISLLCHNK 901
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 141/360 (39%), Gaps = 44/360 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y ++ + K R + KAE+ +++ +P+++ Y +L+ + K+A V
Sbjct: 254 YNCVVNALCKARAMDKAEAILRQMVDKGVLPDNW----TYNSLIYGYSSTGQWKEAVRVS 309
Query: 117 NRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
+M +G N L+ L K K DV M + K FSYKI+++
Sbjct: 310 KKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATK 369
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L + ++ M S+GI PDS +L K Y G ++A + EM ++ T
Sbjct: 370 GCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTY 429
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
++ +GK D A+E + ++ +++ A
Sbjct: 430 STVIAALCRIGKMDD-------------------AVEKFNQM--IDQGVA---------P 459
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ST H+ L++ + H L K KDLV QM G ++ ++ + G V A +
Sbjct: 460 SISTYHF--LIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQN 517
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
I P Y +MD Y G + + ++F M G + TLV Y
Sbjct: 518 IF-DFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGY 576
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 7/279 (2%)
Query: 143 KKKVADVLLLMEKENVKLT---QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
K AD LL M E + +Y +ID + D+ + M GI PD ST
Sbjct: 194 KSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLST 253
Query: 200 QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE 259
+ +KAEA+L++M + WT L+ Y+ G+ + R+ K
Sbjct: 254 YNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMT 313
Query: 260 SNPWL-DVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
S L DV + + + K K+++A VF M+ +K Y +L YA L
Sbjct: 314 SQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLV 373
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
+L M G ++ L+K + + G +++A +I+ ++ +P +Y +
Sbjct: 374 DLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRA-TIIFNEMREQGVEPDVVTYSTV 432
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + G + + F++M G + L+Q +
Sbjct: 433 IAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGF 471
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 62/323 (19%), Positives = 130/323 (40%), Gaps = 17/323 (5%)
Query: 59 IERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV-----VYRTLLANCVAGNNVKKAE 113
+E D + +IA L + K + ++K + V Y L+ ++ KA+
Sbjct: 422 VEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAK 481
Query: 114 EVFNRMKDKG----FPVTSFACNQLLILYKRLDKKKVADVLLLME-KENVKLTQFSYKIL 168
++ +M +KG +F N L L + +D + + D + + NV + Y L
Sbjct: 482 DLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMV----YNTL 537
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+D + +V + M S GI+P+ L Y GR ++ ++ +E+ +
Sbjct: 538 MDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597
Query: 229 KEHRWTCRLLLPLYAELGKADQV-ARIWKLCESNPWLDVCMAAIEAWG--KLNKVEEAEA 285
K ++L + G+ + ++ ES +D +I G K + +EA
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+FK + K+ ++ + + + KDL ++ SG + + ++ +
Sbjct: 658 LFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLI 717
Query: 346 EGGEVEKADSILLKAQQQNKFKP 368
+ G VE+AD + + +P
Sbjct: 718 KEGLVEEADDMFSSMENAGCEQP 740
>gi|297737146|emb|CBI26347.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/428 (21%), Positives = 169/428 (39%), Gaps = 49/428 (11%)
Query: 34 LRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRG- 92
L+ + + +AL++ EWL+ + Y L ++ K R ES ++ RG
Sbjct: 170 LKEQSCWERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMS--RGI 227
Query: 93 ---EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
Y TL+ G ++A +RM +G ++ YK+ + K A+
Sbjct: 228 TPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQ 287
Query: 150 LL------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+ +V L+ ++Y LID G++ L M EGI P++ T +
Sbjct: 288 FFKNWSLESASQPHVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTM 347
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
+ G+ E+A +++++ME T +L+ L+A
Sbjct: 348 IHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHA-------------------- 387
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
K N ++ A + FK+M + + Y LL ++ ++ + + LV
Sbjct: 388 ------------KHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVS 435
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
+M E G I AL ++++E G ++K+ + + Y +D Y +R
Sbjct: 436 EMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSS--ECYSANIDAYGER 493
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPNKALA 441
G I EK F ++ ++ +F +++AY N A + D M V P+K
Sbjct: 494 GHILEAEKAFLCCKESRKLSVL-EFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSY 552
Query: 442 AQVAQVDA 449
+ Q+ A
Sbjct: 553 NSLIQILA 560
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 168/409 (41%), Gaps = 74/409 (18%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGE---VVYRTLLANCVAGNNVKKAEEVFN 117
R Y + L AK + +A SY +K+ E+ R E V YRTLL + V +AE + +
Sbjct: 377 RTYNILISLHAKHNNIDRAASYFKKMKEA-RLEPDLVSYRTLLYAFSIRHLVGEAEILVS 435
Query: 118 RMKDKGFPVTSFACNQLLILY-------------KRL-------------------DKKK 145
M ++G + F + L +Y +R ++
Sbjct: 436 EMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYSANIDAYGERGH 495
Query: 146 V--ADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+ A+ L KE+ KL+ + ++I G SN Q++++M++ G+ PD + L
Sbjct: 496 ILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSL 555
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
+ S KA+ L +M+ L V+ C
Sbjct: 556 IQILASADLPHKAKFYLMKMQETQL----------------------VSDCIPYC----- 588
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
A I ++ KL ++E AE +FK M + Y L+ +AD + + + V
Sbjct: 589 -----AVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVN 643
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
+ +G + + +++L+KL+ + G +E+A K Q ++ P S ++D Y++R
Sbjct: 644 ALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEA-YKMLQASEVGPDVYSSNCMIDLYSER 702
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMR 430
+ E+IF +++ G F F ++ Y I A+ I +MR
Sbjct: 703 SMVKQAEEIFESLKRKGDANEF-SFAMMLCMYKRIGKLKEAFQIVQKMR 750
>gi|293333246|ref|NP_001169278.1| uncharacterized protein LOC100383141 [Zea mays]
gi|224028343|gb|ACN33247.1| unknown [Zea mays]
Length = 901
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 157/381 (41%), Gaps = 17/381 (4%)
Query: 49 WLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI--------PESFRGE---VVYR 97
W + ++DF++ D + +DL ++ L A+ Y KI PE R V Y
Sbjct: 211 WCDGRFEVDFLDLDCIT-VDLDGPMQFLL-ADMYDDKIAAPAAGVAPERPRKPKLVVTYN 268
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKE 156
L+ +K A ++F M G ++ N L+ ++ A+VL M
Sbjct: 269 VLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEVLFASMVIR 328
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
VK +Y +++ + DL G+ + +++ G+ PD+ T IL + KA
Sbjct: 329 GVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAVTYRILLQVLCERKMVHKA 388
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ-VARIWKLCESNPWLDVCMAAI-EAW 274
E +++ + H + +++ +Y +LG D+ +A K C +AI + +
Sbjct: 389 EDVIEGILKAGSFVHEQSLPVVMKMYVDLGLLDEAIAFFEKHCRGKGVSSKNFSAIMDVF 448
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
EEAE +F + Y ++K Y K + L + M ESG
Sbjct: 449 AGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDRVSSLFESMEESGVPSDE 508
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+++L+++ GG +A +L K + F+P +Y I+ Y++ + +F+
Sbjct: 509 CTYNSLIQMFSFGGFPHRAKKLLGKMKDAG-FEPKCETYSAIIRSYSRHCLVPEAIDLFN 567
Query: 395 RMRQVGYVARFKQFQTLVQAY 415
M+ G + L+ +
Sbjct: 568 EMKASGVEPNVIVYGILIDMF 588
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 113/257 (43%), Gaps = 36/257 (14%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y +LID+ G++ L + M + G+ PD+ T L + G +AE + M
Sbjct: 266 TYNVLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFGFSGNSAQAEVLFASM 325
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
+K T +++ ++A +G + V + + C+ N
Sbjct: 326 VIRGVKPDTKTYNVMMTVFASIGDLEGVLKYY--CQIR----------------NAGLHP 367
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+AV R+ LL+V + KM+ K +D+++ + ++G + + ++K+
Sbjct: 368 DAVTYRI--------------LLQVLCERKMVHKAEDVIEGILKAGSFVHEQSLPVVMKM 413
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFS-SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+V+ G +++A + ++ + K + S ++ IMD +A RG E IF R G
Sbjct: 414 YVDLGLLDEAIAFF---EKHCRGKGVSSKNFSAIMDVFAGRGLWEEAEHIFCSERGDGNE 470
Query: 403 ARFKQFQTLVQAYINAK 419
++ +++AY AK
Sbjct: 471 KDIVEYNVMIKAYGQAK 487
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 111/255 (43%), Gaps = 5/255 (1%)
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+V+ + ME+ V + +Y LI + +++ MK G EP T + +
Sbjct: 491 RVSSLFESMEESGVPSDECTYNSLIQMFSFGGFPHRAKKLLGKMKDAGFEPKCETYSAII 550
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---N 261
+ Y +A + EM+ ++ + +L+ ++AE G + L E +
Sbjct: 551 RSYSRHCLVPEAIDLFNEMKASGVEPNVIVYGILIDMFAETGNVKEALHYSNLLEQSGIS 610
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P V + I+A+ K N +EA+ ++ RM+ A+L +YA +M+++ K++
Sbjct: 611 PNHIVLTSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAMLNLYAKLEMVTEAKEI 670
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ + H +++ + L+ G + ++ I K Q+ +S +M Y
Sbjct: 671 FDSLRRNN-HADAVSYTTMAYLYKSIGLLSESIRITHKLQKSGLLSDC-ASCNAVMACYG 728
Query: 382 KRGDIHSTEKIFHRM 396
+G++ ++ H+M
Sbjct: 729 AKGNLRDCAELVHQM 743
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 142/347 (40%), Gaps = 17/347 (4%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y TL+ N+ A V+ M + G N +L Y R + ++ ++ +M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
EKE + T SY ILI ++ + + E + + DS T +L G
Sbjct: 352 EKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCM 268
KA ++L+E E + ++ G+ D+VA + C+ NP VC
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP--HVCN 468
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I + + +K+E+A F M + Y L+ + + S+ LVK+M
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + + L+ +G +++ A ++ +A ++ FKP + +I+ G +
Sbjct: 529 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVED 587
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVF 435
+++ M+Q V TL++ + Y +RD RA ++
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGF-------YKVRDFERASKIW 627
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 148/396 (37%), Gaps = 22/396 (5%)
Query: 37 RRMYGKALQLSEWL-ETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV- 94
++ + KA +L W+ E D Y + ++ +AK + A ++PE RG
Sbjct: 162 KKQFDKAKELLNWMWEQGFSPDVFS--YGTLINSLAKNGYMSDALKLFDEMPE--RGVTP 217
Query: 95 ---VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADV 149
Y L+ ++ A E++ R+ + ++I L K + ++
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M+K ++Y LI S +L G +V + M G+ PD + Y+
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 337
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL------CESNPW 263
GR E+ + K ME + + L+ L+ E K D+ IW+L C +
Sbjct: 338 AGRIEECLELWKVMEKEGCRTVVSYNILIRGLF-ENAKVDEAISIWELLPEKDCCADSMT 396
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
V + + G LNK A ++ + L T Y++++ L + ++
Sbjct: 397 YGVLVHGLCKNGYLNK---ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
QM + GC P +A++ V ++E A + F P +Y +++ +K
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF-PTVVTYNTLINGLSKA 512
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ M G+ + L+ K
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK 548
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 267 CMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
C I ++ L NK +EAE+ F + + Y L+K+ K K K
Sbjct: 110 CQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAK 169
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
+L+ M E G ++ L+ + G + A L + P + Y +++D
Sbjct: 170 ELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALK-LFDEMPERGVTPDVACYNILIDG 228
Query: 380 YAKRGDIHSTEKIFHRM 396
+ K+GDI + +I+ R+
Sbjct: 229 FFKKGDILNASEIWERL 245
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 5/177 (2%)
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVK 323
DV + I+A+ K + ++A +F+RM + + + + Y +LL + + +
Sbjct: 79 DVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFL 138
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
G ++ L+K+ + +KA LL + F P SY +++ AK
Sbjct: 139 YFETMGLSPNLQTYNILIKISCRKKQFDKAKE-LLNWMWEQGFSPDVFSYGTLINSLAKN 197
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDR-MRADNVFPN 437
G + K+F M + G + L+ + A I +R ++ +V+PN
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPN 254
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 73/194 (37%), Gaps = 4/194 (2%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y ILI I + +++ M +G PD + L G A + EM
Sbjct: 151 TYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 210
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA----IEAWGKLNK 279
+ +L+ + + G + IW+ P + + + I K K
Sbjct: 211 PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 270
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
+E+ ++ RM K + Y+ L+ L + K+MAE+G + ++
Sbjct: 271 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 330
Query: 340 LVKLHVEGGEVEKA 353
++ ++ G +E+
Sbjct: 331 MLNGYLRAGRIEEC 344
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/362 (19%), Positives = 158/362 (43%), Gaps = 21/362 (5%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
+D LDL+ ++R +K +P S + Y +++ CV N+++A +V + M
Sbjct: 288 KDLVMALDLLREMR--EKG-----GVPAS---QETYTSVIVACVKEGNMEEAVKVKDEMV 337
Query: 121 DKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
G P++ A L+ + ++ K D ME+E + + + ++I+ ++ ++
Sbjct: 338 GFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEME 397
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE---HRWTCR 236
++ + MKS GI P S +L + G K ++ E+ D+ + H + C
Sbjct: 398 KAVEIYKRMKSVGIAPSS----VLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCN 453
Query: 237 LLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
+ L + GK D ++ E+ P + + A ++ ++ A ++F M +
Sbjct: 454 KIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ + Y+ L+ + ++ +++ QM S + ++ ++ + G+ KA
Sbjct: 514 GLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+L ++ ++ +SY I+D + K GD S + + M + G F +L+
Sbjct: 574 KEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLIN 633
Query: 414 AY 415
+
Sbjct: 634 GF 635
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 131/348 (37%), Gaps = 25/348 (7%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
P +F Y L+ + + A EV N+M F N ++ ++ +
Sbjct: 517 PNNF----TYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 147 ADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
A +L L++++ + SY +ID + D + M GI P+ T L
Sbjct: 573 AKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLI 632
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL----GKADQVARIWKLCES 260
+ R + A M+ EM+ +LK L +P Y L K + + + L
Sbjct: 633 NGFCKSNRMDLALEMIHEMKSKDLK-------LDVPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 261 ------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
P + V I + L K++ A ++K+M YT ++
Sbjct: 686 LLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
L DL ++ G + + LV + G+ +A +L + ++++ P Y
Sbjct: 746 LILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDA-TPNVLIYS 804
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPA 422
++ + + G+++ ++ M + G V F LV + K PA
Sbjct: 805 TVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRVE-KPPA 851
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 168/393 (42%), Gaps = 30/393 (7%)
Query: 42 KALQLSEW------LETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQK----IP-ESF 90
+AL L EW + N +LD ++L+ ++ G + S K IP E +
Sbjct: 159 RALLLFEWGWLHFGSDQNLRLD------NQVVELMVRILGRESQHSIASKLFDLIPVEKY 212
Query: 91 RGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK--KVA 147
+V Y T+L K+A ++F++M+ G T N +L +Y ++ + ++
Sbjct: 213 SLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRIL 272
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
++L M + ++ +F+ +I G+ L + + +K G +P + + + +
Sbjct: 273 ELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVF 332
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWL 264
G +A ++LKEME +N T L Y G D+ + S P
Sbjct: 333 GKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNA 392
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
I+A+GK + ++A +F +M + Y ++L + S+ +D++K
Sbjct: 393 ITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKK---SRTEDVIKV 449
Query: 325 MAE---SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ E +GC W+ ++ + E G+ + + L+ + F+P ++ ++ YA
Sbjct: 450 LCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKV-LREMKNCGFEPDKDTFNTLISSYA 508
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ G + K++ M + G+ + L+ A
Sbjct: 509 RCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNA 541
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 126/308 (40%), Gaps = 13/308 (4%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLL 151
E T+++ C + +A + +K G+ + N +L ++ + + +L
Sbjct: 287 EFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILK 346
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME N +Y L ++ L V++ M S+G+ P++ T + Y G
Sbjct: 347 EMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAG 406
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
R++ A + +M+ + +T +L + + + + V ++ LCE L+ C
Sbjct: 407 REDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKV--LCEMK--LNGCAPNR 462
Query: 272 EAWGKLNKVEEAEA-------VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
W + V E V + M + + L+ YA + +
Sbjct: 463 ATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGE 522
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M +SG ++AL+ G+ + A+S++ + Q FKP +SY L++ Y+K G
Sbjct: 523 MVKSGFTPCVTTYNALLNALAHRGDWKAAESVI-QDMQTKGFKPNETSYSLLLHCYSKAG 581
Query: 385 DIHSTEKI 392
++ EK+
Sbjct: 582 NVRGIEKV 589
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 98/222 (44%), Gaps = 5/222 (2%)
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
C +RG++K E I + F ++ RTL+ + +++ E F++++ G+
Sbjct: 576 CYSKAGNVRGIEKVEKEIYD-GQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYK 634
Query: 126 VTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
N +L ++ R K ++L + + ++ F+Y L+D+ + ++ ++V
Sbjct: 635 PDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEV 694
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
++ +++ EPD + + K + G ++A +L EM ++ T L YA
Sbjct: 695 LKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAG 754
Query: 245 L---GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
+ +A++V R P ++ + K K EEA
Sbjct: 755 MELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEA 796
>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 426
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREJKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 274 AMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 327
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ G+ PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RQRGLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREJKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M+S GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGI 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + + ++ Y G R+ + N D + + G ++EEA V
Sbjct: 286 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAG---RIEEATYV 342
Query: 287 FKR 289
F++
Sbjct: 343 FRQ 345
>gi|242054883|ref|XP_002456587.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
gi|241928562|gb|EES01707.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
Length = 655
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 144/337 (42%), Gaps = 16/337 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+ Y LL + +++ A + M+++G +F+ + LL R A L L
Sbjct: 121 IPYNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPL 180
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD-SSTQAILAKHYVSGG 211
ME + V + LI + + D + +++ GI PD + A +A + S
Sbjct: 181 MEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDL 240
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCESNPWLDVC 267
++ +L +M D + T +L A G+ ++ + P L V
Sbjct: 241 IRDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVF 300
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK---DLVKQ 324
+ A+G+L+ EA+ +F M + S Y +L+VY D + + DL++
Sbjct: 301 NIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRS 360
Query: 325 MAE----SGCHIGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
++ +G + P + ++ ++ ++ + E EKA L++ Q +P +Y I+
Sbjct: 361 ASDGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGK-LVQDMQAIGVQPDAITYSTILS 419
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ K G + K+F ++R+ G +QT+V AY
Sbjct: 420 IWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAY 456
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 114/266 (42%), Gaps = 23/266 (8%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
+ I+++ GQ + D++ +M+ G+ P T + + Y G +A + M
Sbjct: 300 FNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMR 359
Query: 225 ---------GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI---- 271
G ++K + T ++ +Y GK+ + + KL + + V AI
Sbjct: 360 SASDGNGGAGSSVKPNVVTYNTMIAIY---GKSLEDEKAGKLVQDMQAIGVQPDAITYST 416
Query: 272 --EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
W K K++ A +F+++ + ++ Y ++ Y ++S+ K L++ + +
Sbjct: 417 ILSIWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPE 476
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + +K+ G +E+A + +A + K S + +MD YAK +
Sbjct: 477 G----IPKETAIKILASAGRLEEAAWLFRRAANTGEIKDS-SVHRAMMDLYAKNRRHRNV 531
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
++F MR++G + + T + AY
Sbjct: 532 IEVFDEMRKLGQLPDSETIATAMNAY 557
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME------------KEN 157
++A+ +F M+ G P + N +L +Y D + + L + +
Sbjct: 314 READRLFWSMRRAGVPPSVVTYNTMLRVYG--DAGLFGEAVHLFDLMRSASDGNGGAGSS 371
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
VK +Y +I I G+S + ++V+ M++ G++PD+ T + + +V G+ ++A
Sbjct: 372 VKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWVKAGKLDRAA 431
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKL 277
+ +++ + + ++ Y G Q R+ + + +P AI+
Sbjct: 432 KLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLK-DPEGIPKETAIKILASA 490
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
++EEA +F+R + T + + + A++ +YA ++
Sbjct: 491 GRLEEAAWLFRRAANTGEIKDSSVHRAMMDLYAKNR 526
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 163/383 (42%), Gaps = 41/383 (10%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVY--RTLLANCVAGNNVKKAEEVFN 117
E Y S + ++ K L +A + + ++ R Y T++ + +A +
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME--KENVKLTQFSYKILIDIKGQS 175
R + KG + A N +L +++ K V + L + E K++ +Y ILID+ ++
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGK--VDEALKVFEEMKKDAAPNLSTYNILIDMLCRA 390
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L ++ ++M+ G+ P+ T I+ + ++A AM +EM+
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD----------- 439
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+K+C + + C + I+ GK+ +V++A V+++M +
Sbjct: 440 -------------------YKVCTPDE-ITFC-SLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ ++ YT+L+K + +H G + K M C + + + GE EK +
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + + + +F P SY +++ K G + T ++F+ M++ G V + + ++ +
Sbjct: 539 MFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 416 INAK--TPAYGIRDRMRADNVFP 436
AY + + M+ P
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEP 620
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/330 (18%), Positives = 140/330 (42%), Gaps = 12/330 (3%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KK 145
PES+ ++ ++A C N +++ M GF + C ++++ + +K ++
Sbjct: 98 PESYNSLLL---VMARC---RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLRE 151
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
DV+ +M K + +Y LI N M + + M+ G EP L +
Sbjct: 152 GYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIR 211
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---P 262
+ GR + A ++L EM+ +L + + + ++GK D + + E+N P
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
+ I K N+++EA +F+ + K + T Y ++ Y + L+
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++ G +A++ ++ + G+V++A + + + P S+Y +++D +
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF--EEMKKDAAPNLSTYNILIDMLCR 389
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
G + + ++ M++ G + +V
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 114/260 (43%), Gaps = 8/260 (3%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
SY ILI ++ ++ +MK +G D+ I+ + G+ KA +L+EM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM--AAIEAWGKLNKV 280
+ + T ++ A++ + D+ +++ +S L+V + + I+ +GK+ ++
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 281 EEAEAVFKRMSKTWKKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+EA + + + + K L+ YT +LL + +++ + M E C + +
Sbjct: 674 DEAYLILEELMQ--KGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L+ + + KA + + Q+ KP SY ++ AK G+I +F R +
Sbjct: 732 ILINGLCKVRKFNKA-FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 399 VGYVARFKQFQTLVQAYINA 418
G V + +++ N
Sbjct: 791 NGGVPDSACYNAMIEGLSNG 810
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 16/119 (13%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+K+ +K + SY +I ++ ++ + + K+ G PDS+ + + +G R
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLL----------------PLYAELGKADQVARIW 255
A ++ +E L H TC +LL + E GKA AR W
Sbjct: 813 AMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAARSW 871
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 128/290 (44%), Gaps = 6/290 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + +K +Y +L+ ++ + V++ M S + PD T +IL + G
Sbjct: 249 MLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGD 308
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---A 269
+ ++ +E +K +TC +LL + GK + + + ++ L +
Sbjct: 309 SQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNT 368
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I + ++ +E A ++F++M + Y AL+ + +++ DLV +M ++G
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ L+ + G++EK I+L Q+ KP SY I++ + K G I
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKC-FIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEA 487
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
I M + + + ++ AYI + A+ + ++M++ V P+
Sbjct: 488 VAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPS 537
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 131/328 (39%), Gaps = 5/328 (1%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVL 150
G LL + KAEEV + + G T+ N L+ Y ++ D + +
Sbjct: 327 GAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIF 386
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ ++ +Y LI+ G+ +T +V M+ G+ P T L Y
Sbjct: 387 QQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRA 446
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVC 267
G+ EK +L +M+ LK + + ++ + + GK + I + + P V
Sbjct: 447 GQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVY 506
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
A I+A+ + ++A + ++M + S Y L+K +S+ ++L+ +
Sbjct: 507 NAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRN 566
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G ++++ L+ ++A L K + KP +Y ++ G +H
Sbjct: 567 YGLAPDVISYNTLISACCYRSNTDRALE-LEKEMWKCGIKPSPRTYRMLFSSLGGAGRVH 625
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAY 415
E ++ +M V + +V AY
Sbjct: 626 EMENLYQQMLDKDVVPCSGIYNIMVDAY 653
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 124/330 (37%), Gaps = 38/330 (11%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKK 144
+P+ F Y L + + +F KG + ++ C+ LL L K
Sbjct: 290 VPDGF----TYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKIS 345
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K +VL + + T Y LI+ Q DL G + + MKS I PD T L
Sbjct: 346 KAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALI 405
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL 264
R +A ++ EME + + NP +
Sbjct: 406 NGLGKVERITEAHDLVIEMEKNGV--------------------------------NPSV 433
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ I+A+G+ ++E+ + M + K + Y +++ + + + + ++
Sbjct: 434 ETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDD 493
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M G ++A++ ++E G ++A +L + + + P +Y L++ K+
Sbjct: 494 MFIKDVLPGAQVYNAIIDAYIECGSTDQA-FMLAEKMKSSGVPPSIVTYNLLIKGLCKQS 552
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
I E++ +R G + TL+ A
Sbjct: 553 QISEAEELLDSLRNYGLAPDVISYNTLISA 582
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 10/153 (6%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
+P S V Y L+ + + +AEE+ + +++ G + N L+ +
Sbjct: 534 VPPSI---VTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLI---SACCYRS 587
Query: 146 VADVLLLMEKE----NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
D L +EKE +K + +Y++L G + + M+ + + M + + P S
Sbjct: 588 NTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYN 647
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
I+ Y G + K EA+ KEM + +T
Sbjct: 648 IMVDAYAKCGEESKVEALRKEMSDKGIAVGDYT 680
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 162/408 (39%), Gaps = 54/408 (13%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y L+ +++KA+ + N M G P T N + K + +V D+L M+
Sbjct: 379 YNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK 438
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
K N+ T ++ ++I+ + + +V E M S G++P++ L K +V GR +
Sbjct: 439 KSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQ 498
Query: 215 KAEAMLK-----------------------------------EMEGDNLKEHRWTCRLLL 239
+A +LK EM LK + +T L+
Sbjct: 499 EAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALI 558
Query: 240 PLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
Y + G+ R +K C P VC A I+ + K EA ++F+ M
Sbjct: 559 HGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVH 618
Query: 297 LSTKHYTALLKVYADHKMLSKGK-----DLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ Y+AL+ H +L GK +L+ + E G +++++ + G +
Sbjct: 619 PDVRTYSALI-----HGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIG 673
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
KA L + Q P +Y +++ K G+I ++F + G + T+
Sbjct: 674 KAFQ-LHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATI 732
Query: 412 VQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
+ Y + + A+ + D M V P+ + + A +D RK +E
Sbjct: 733 IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYS--ALIDGCRKEGNTE 778
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 4/247 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M VKL F+Y L+ + D+ D ++ M GI+PD+ T + + Y+
Sbjct: 367 MLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQN 426
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ + +L EM+ NL +TC +++ G + +R++++ S P +
Sbjct: 427 TSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTT 486
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + + +EA + K M K + Y +++ + + + KD + +M E G
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG 546
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ AL+ + + GE++ AD K P ++D Y K G
Sbjct: 547 LKPNVYTYGALIHGYCKSGEMQVADR-YFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEA 605
Query: 390 EKIFHRM 396
IF M
Sbjct: 606 TSIFRCM 612
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 128/326 (39%), Gaps = 41/326 (12%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP---------------- 195
LM+K+ + F+Y ILID G+ T ++E M S+G++P
Sbjct: 296 LMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQG 355
Query: 196 DSS-------------------TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
DS T L K G EKA+A+L EM +K T
Sbjct: 356 DSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYN 415
Query: 237 LLLPLYAELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
++ Y + +V + ++ +SN P C I + +E+A VF+ M
Sbjct: 416 NMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSL 475
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K + YT L+K + + ++K M + G L +++++ + ++E+A
Sbjct: 476 GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEA 535
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
L++ ++ KP +Y ++ Y K G++ ++ F M G L+
Sbjct: 536 KDYLVEMIERG-LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALID 594
Query: 414 AYI--NAKTPAYGIRDRMRADNVFPN 437
Y + T A I M +V P+
Sbjct: 595 GYCKEGSTTEATSIFRCMLGRSVHPD 620
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 3/217 (1%)
Query: 41 GKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRT 98
GKA QL E++ K + Y + ++ + K +++A IP V Y T
Sbjct: 673 GKAFQLHEYM-CQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENV 158
++ N+ KA +F+ M KG P SF + L+ ++ + A L L +
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+ S L+D +S + +Q++E M + ++PD T IL ++ G ++AE
Sbjct: 792 FASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQ 851
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
+M+ NL + T LL Y G+ ++ ++
Sbjct: 852 FFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALF 888
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/420 (19%), Positives = 149/420 (35%), Gaps = 78/420 (18%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V+Y TL+ V ++A + M KG N ++I L K ++ D L+
Sbjct: 482 VIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVE 541
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + +K ++Y LI +S ++ D+ + M GI P+ L Y G
Sbjct: 542 MIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGS 601
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLL-------------LPLYAE--------------- 244
+A ++ + M G ++ T L + L +E
Sbjct: 602 TTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNS 661
Query: 245 ----------LGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
+GKA Q+ +C+ +P + A I K ++E A +F +
Sbjct: 662 IISGFCKQGGIGKAFQLHEY--MCQKGISPNIITYNALINGLCKAGEIERARELFDGIPG 719
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ Y ++ Y LSK L +M G + AL+ + G EK
Sbjct: 720 KGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEK 779
Query: 353 ADSILLKAQQQN---------------------------------KFKPMFSSYMLIMDQ 379
A S+ L++ Q+ KP +Y +++D
Sbjct: 780 ALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDY 839
Query: 380 YAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPN 437
+ K G + E+ F M++ + + L+ Y A ++ + + D M A ++ P+
Sbjct: 840 HCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPD 899
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 150/403 (37%), Gaps = 55/403 (13%)
Query: 24 RAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKA---- 79
R AL LR ++ G LSE+LE D Y S + K G+ KA
Sbjct: 622 RTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFT--YNSIISGFCKQGGIGKAFQLH 679
Query: 80 ESYIQK-IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY 138
E QK I + + Y L+ +++A E+F+ + KG + ++ Y
Sbjct: 680 EYMCQKGISPNI---ITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGY 736
Query: 139 -KRLDKKKVADVLLLMEKENVKLTQFSYKILID-IKGQSNDLTGMDQVVEAMKSEGIEPD 196
K + K + M + V F Y LID + + N + +E+++ +G
Sbjct: 737 CKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ-KGFAST 795
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
SS A++ + G+ +A +L++M ++K T +L+ + + G
Sbjct: 796 SSLNALM-DGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGF--------- 845
Query: 257 LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
++EAE F M K + YTALL Y S
Sbjct: 846 -----------------------LKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRS 882
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA----DSILLKAQQQNKFKPMFSS 372
+ L +M + W ++ H++ G+ K D +L K +K +
Sbjct: 883 EMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSK-----NV 937
Query: 373 YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+++D ++ + K+ ++ + G TLV+ +
Sbjct: 938 CHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCF 980
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 97/449 (21%), Positives = 175/449 (38%), Gaps = 33/449 (7%)
Query: 1 MDAPDISIHST---LTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLD 57
+ AP ++ST L K++ + L + + L R + +ALQ EW+ L
Sbjct: 139 LSAPSTPLNSTALLLEKWSHQLVGLE--DFPYLLRELGNRGEWERALQGYEWMVQQVHLR 196
Query: 58 FIERDYASCL-DLIAKLRGLQKAESYIQKIPESFRGEVVY--RTLLANCVAGNNVKKAEE 114
AS + + +L ++ A + ++ G VY +++ ++A +
Sbjct: 197 SEWSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALK 256
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRL---------DKKKVADVLLLMEKENVKLTQFSY 165
VF MK G C LI Y + D K+ D+ M+KE V+ + ++
Sbjct: 257 VFQAMKKAG-------CKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITF 309
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
LI + + +V M+ GIE D T L GG+ E A +++ M G
Sbjct: 310 NSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRG 369
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEE 282
N+ + T ++ Y +LG ++ ++ + ES D I+ + KL + ++
Sbjct: 370 KNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDD 429
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A K M + K Y AL+ Y L +M G L + AL+
Sbjct: 430 ALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALID 489
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+ + G + ++ + ++ KP Y ++D K G + + M Q G
Sbjct: 490 SYSKAGMHQDVSNVFTEFKRAG-LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQ 548
Query: 403 ARFKQFQTLVQAYINAKTPAYGIRDRMRA 431
+ +L+ AY YG D++ A
Sbjct: 549 PNIVTYNSLIDAY-----GRYGQADKLEA 572
>gi|125572530|gb|EAZ14045.1| hypothetical protein OsJ_03970 [Oryza sativa Japonica Group]
Length = 665
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 142/339 (41%), Gaps = 18/339 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+ Y LL + ++ A + M+D+G +F+ + LL R A L L
Sbjct: 129 IPYNLLLRSACRPGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPL 188
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMK-SEGIEPD-SSTQAILAKHYVSG 210
ME + V + LI + + D + ++ + GI+PD + A +A + S
Sbjct: 189 MEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSD 248
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCESNPWLDV 266
++ +L +M D + + +L A G+ ++ + P L V
Sbjct: 249 LLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSV 308
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ A+G+L+ EA+ +F M + S Y +L+VY D + + L M
Sbjct: 309 FNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMR 368
Query: 327 ES--------GCHIGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
+ G I P + ++ ++ ++ + E EKA S L++ Q N +P +Y I
Sbjct: 369 SAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGS-LVQDMQANGIQPNAITYSTI 427
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + K G + K+F ++R+ G +QT+V AY
Sbjct: 428 LSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAY 466
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 68/355 (19%), Positives = 131/355 (36%), Gaps = 49/355 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDK-GFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V++ L+ + G + KA +F+R++ G A N + Y + D + A+ LLL
Sbjct: 199 VLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLL 258
Query: 153 --MEKENVKLTQFSY-KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M + V SY IL + + L + ++PD S I+ Y
Sbjct: 259 HDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQ 318
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--------- 260
+A+ + M + T +L +Y + G + ++ L S
Sbjct: 319 LDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRG 378
Query: 261 ----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
P + I +GK + E+A ++ + M + + Y+ +L ++ L
Sbjct: 379 GSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLD 438
Query: 317 KGKDLVKQMAESGCHIGPLAWDALV-------------------------------KLHV 345
+ L +++ E+G I P+ + +V K+
Sbjct: 439 RAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETAIKILA 498
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
G VE+A + +A + S Y +++D +AK S ++F MR+ G
Sbjct: 499 NAGRVEEAAWLFRRAADAGDVRDT-SVYRMMIDLFAKSRRHRSVIEVFDEMRKAG 552
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 131/323 (40%), Gaps = 17/323 (5%)
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K +V M V T + Y +I+ G++ +++ MK E + P T +
Sbjct: 154 KCREVFDEMPSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVI 213
Query: 205 KHYVSGGRK-EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN- 261
GG E + EM + ++ T LL A G D+ +++ + ES
Sbjct: 214 NACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGI 273
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P ++ ++ +GKLN++E+ + + M Y LL+ YA+ + + D
Sbjct: 274 VPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMD 333
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
+ +QM +GC + L+ L+ + G + I L+ + N P +Y +++ +
Sbjct: 334 VFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNT-DPDAGTYNILIQVF 392
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA------YINAKTPAYGIRDRMRADNV 434
+ G +FH M + + ++ L+ A Y +AK I M +
Sbjct: 393 GEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKK----ILLHMNEKGI 448
Query: 435 FPNKALAAQVAQVDAFRKTAVSE 457
P+ A ++AF + A+ E
Sbjct: 449 VPSS--KAYTGVIEAFGQAALYE 469
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 146/333 (43%), Gaps = 15/333 (4%)
Query: 107 NNVKKAEEVFNRMKDKG-FP-VTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQF 163
N ++K E+ M+ G P +TS+ N LL Y L K+ DV M+
Sbjct: 291 NRLEKVSELLREMESGGNLPDITSY--NVLLEAYAELGSIKEAMDVFRQMQAAGCVANAA 348
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y +L+++ G+ + + MK +PD+ T IL + + GG ++ + +M
Sbjct: 349 TYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM 408
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-----PWLDVCMAAIEAWGKLN 278
+N++ + T L+ + G + +I L N P IEA+G+
Sbjct: 409 VEENVEPNMETYEGLIFACGKGGLYEDAKKI--LLHMNEKGIVPSSKAYTGVIEAFGQAA 466
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
EEA VF M++ + + Y + + +A + + + ++ +M ESG +++
Sbjct: 467 LYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFN 526
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++K +GG+ E+A ++ ++ N +P + +++ Y G + +E+ F ++
Sbjct: 527 GVIKAFRQGGQYEEAVKSYVEMEKAN-CEPNELTLEVVLSVYCSAGLVDESEEQFQEIKA 585
Query: 399 VGYVARFKQFQTLVQAYI--NAKTPAYGIRDRM 429
G + + ++ Y + AY + D M
Sbjct: 586 SGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 142/347 (40%), Gaps = 17/347 (4%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y TL+ N+ A V+ M + G N +L Y R + ++ ++ +M
Sbjct: 292 TYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 351
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
EKE + T SY ILI ++ + + E + + DS T +L G
Sbjct: 352 EKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCM 268
KA ++L+E E + ++ G+ D+VA + C+ NP VC
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNP--HVCN 468
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I + + +K+E+A F M + Y L+ + + S+ LVK+M
Sbjct: 469 AVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + + L+ +G +++ A ++ +A ++ FKP + +I+ G +
Sbjct: 529 GWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVED 587
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVF 435
+++ M+Q V TL++ + Y +RD RA ++
Sbjct: 588 ALQLYSEMKQRKCVPNLVTHNTLMEGF-------YKVRDFERASKIW 627
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 148/396 (37%), Gaps = 22/396 (5%)
Query: 37 RRMYGKALQLSEWL-ETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV- 94
++ + KA +L W+ E D Y + ++ +AK + A ++PE RG
Sbjct: 162 KKQFDKAKELLNWMWEQGFSPDVFS--YGTLINSLAKNGYMSDALKLFDEMPE--RGVTP 217
Query: 95 ---VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADV 149
Y L+ ++ A E++ R+ + ++I L K + ++
Sbjct: 218 DVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEI 277
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M+K ++Y LI S +L G +V + M G+ PD + Y+
Sbjct: 278 WHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLR 337
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL------CESNPW 263
GR E+ + K ME + + L+ L+ E K D+ IW+L C +
Sbjct: 338 AGRIEECLELWKVMEKEGCRTVVSYNILIRGLF-ENAKVDEAISIWELLPEKDCCADSMT 396
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
V + + G LNK A ++ + L T Y++++ L + ++
Sbjct: 397 YGVLVHGLCKNGYLNK---ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 453
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
QM + GC P +A++ V ++E A + F P +Y +++ +K
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCF-PTVVTYNTLINGLSKA 512
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ M G+ + L+ K
Sbjct: 513 ERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGK 548
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 267 CMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
C I ++ L NK +EAE+ F + + Y L+K+ K K K
Sbjct: 110 CQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAK 169
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
+L+ M E G ++ L+ + G + A L + P + Y +++D
Sbjct: 170 ELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALK-LFDEMPERGVTPDVACYNILIDG 228
Query: 380 YAKRGDIHSTEKIFHRM 396
+ K+GDI + +I+ R+
Sbjct: 229 FFKKGDILNASEIWERL 245
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVK 323
DV + I+A+ K + ++A +F+RM + + + + Y +LL + + +
Sbjct: 79 DVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFL 138
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
G ++ L+K+ + +KA +L +Q F P SY +++ AK
Sbjct: 139 YFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQG-FSPDVFSYGTLINSLAKN 197
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDR-MRADNVFPN 437
G + K+F M + G + L+ + A I +R ++ +V+PN
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPN 254
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/194 (18%), Positives = 73/194 (37%), Gaps = 4/194 (2%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y ILI I + +++ M +G PD + L G A + EM
Sbjct: 151 TYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 210
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA----IEAWGKLNK 279
+ +L+ + + G + IW+ P + + + I K K
Sbjct: 211 PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 270
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
+E+ ++ RM K + Y+ L+ L + K+MAE+G + ++
Sbjct: 271 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 330
Query: 340 LVKLHVEGGEVEKA 353
++ ++ G +E+
Sbjct: 331 MLNGYLRAGRIEEC 344
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/379 (19%), Positives = 151/379 (39%), Gaps = 43/379 (11%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLT 161
C AG + A + + M G + + N LL Y R + +VA+VL ME V+ T
Sbjct: 144 CKAGR-MDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPT 202
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMK-------------------------------- 189
+Y IL+D + D++ ++ V + +K
Sbjct: 203 VGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFD 262
Query: 190 ---SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
GIEP+ T L + G+ E AE +L +M+ + ++ ++ Y G
Sbjct: 263 ECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHG 322
Query: 247 KADQVARIWKLCES-NPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
D+ I + E LDV A G ++N++E+A+ + M++ + + YT
Sbjct: 323 MVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYT 382
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
L+ +++ + + + L + M G + ++ ++ +++ G + +A+ K ++
Sbjct: 383 TLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAER-FKKEMEK 441
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTP 421
P +Y ++ + G + ++F M+Q G + L+
Sbjct: 442 KGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEE 501
Query: 422 AYGIRDRMRADNVFPNKAL 440
A+ D M A + P+ L
Sbjct: 502 AFQFYDNMLAAGLTPDDTL 520
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 101/239 (42%), Gaps = 10/239 (4%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEV 115
ER Y + ++ K+ ++ AE + + RG ++++ T++ V KA E+
Sbjct: 273 ERTYGALINGFCKIGQIEAAEMLLTDM--QLRGVGHNQIIFNTMIDGYCRHGMVDKALEI 330
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQ 174
M+ G + + N L R+++ + A LL +M + V+ SY LI I +
Sbjct: 331 KAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSK 390
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
D+ ++ M+ +G P T ++ Y+ G +AE KEME L +T
Sbjct: 391 EGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYT 450
Query: 235 CRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
L+ + GK D R++ K + P + A I K + EEA + M
Sbjct: 451 YAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNM 509
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/145 (17%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
++ + K ++++A + M + KL+ Y LL Y K ++ +++K+M G
Sbjct: 140 VDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGV 199
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ LV G++ K +S+ + +++N ++ Y +++ Y + G++
Sbjct: 200 EPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVY-FYSAVINAYCRAGNVRRAS 258
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
++F G + + L+ +
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGF 283
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 25 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 84
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 85 FREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 144
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 145 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 204
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 205 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 263
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 264 AMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 317
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 108/267 (40%), Gaps = 43/267 (16%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 72 YNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 131
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL----------------------------- 151
+ + CN ++ +Y +L K AD L
Sbjct: 132 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 191
Query: 152 -------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
LM+++N++ +Y ++ I G++ + + +++ M+S GIEP+S T + +
Sbjct: 192 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 251
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNP 262
+ G+ ++A + +++ + + + ++ Y G R+ + N
Sbjct: 252 SIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNI 311
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKR 289
D + + G ++EEA VF++
Sbjct: 312 PRDTAIHILAGAG---RIEEATYVFRQ 335
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 41 MEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 100
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 101 FREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 160
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 161 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 220
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 221 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 279
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 280 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 333
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 2 LFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGD-------LVLYS 54
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE KL +A ++F R+ ++ Y
Sbjct: 55 NL-------------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 89
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 90 AMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREI 149
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 150 KCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 204
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 109/267 (40%), Gaps = 43/267 (16%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 88 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 147
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL----------------------------- 151
+ + CN ++ +Y +L K AD L
Sbjct: 148 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 207
Query: 152 -------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
LM+++N++ +Y ++ I G++ + + +++ M+S GIEP+S T + +
Sbjct: 208 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 267
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNP 262
+ G+ ++A + +++ ++ + + ++ Y G R+ + N
Sbjct: 268 SIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNI 327
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKR 289
D + + G ++EEA VF++
Sbjct: 328 PRDTAIHILAGAG---RIEEATYVFRQ 351
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 4/236 (1%)
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
++++ M S G++P+ + K S R EKAE +L EM N T +L+
Sbjct: 286 NEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDF 345
Query: 242 YAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ + G D+V + ++ E DV I + K ++EA + K M K +
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPN 405
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T YT +LK + ++L+ +M + GC P+ ++ ++ + G VE+A LL
Sbjct: 406 TISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIE-LL 464
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K N P SY ++D K G ++ + M G + ++ A
Sbjct: 465 KQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFA 520
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 112/287 (39%), Gaps = 34/287 (11%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILID 170
A E+ +RM G N +L D+ +K ++L M ++N L ++ IL+D
Sbjct: 285 ANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVD 344
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
Q+ + + +++E M G PD T + + G ++A +LK M K
Sbjct: 345 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKP 404
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
+ + ++L LC + W+D AE + RM
Sbjct: 405 NTISYTIVL---------------KGLCSTERWVD-----------------AEELMSRM 432
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
+ + + ++ ++ + +L+KQM +GC+ +++ ++ + G+
Sbjct: 433 IQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKT 492
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
E+A LL P +Y + A+ G I ++F ++
Sbjct: 493 EEALE-LLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQ 538
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 9/296 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLM 153
Y T+++ C + ++KA E+ M+ G + L+ + + ++ ++A DV +
Sbjct: 75 TYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQL 134
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+E +Y ILIDI G+ + QV++A++ +G +P+ T + G+
Sbjct: 135 LREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQP 194
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVCM 268
E A + + M D + T L+ Y + GK ++ RI+ + CE N +
Sbjct: 195 EHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERN--VITYS 252
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ I A K + + A + M + K +T + ALL A +D+ +QM
Sbjct: 253 SLISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSC 312
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
GC +++ L+ G + +A L + Q Q +P Y ++++ + G
Sbjct: 313 GCKPDAVSYAILISAFDRGNQWCRALQALDEMQGQGH-RPDVGVYNVVIEALTRSG 367
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 136/339 (40%), Gaps = 9/339 (2%)
Query: 83 IQKIPESFRGE---VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LY 138
++K+P SF E V Y +L EE+ M G P N L+ L
Sbjct: 201 LRKLP-SFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLC 259
Query: 139 KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSS 198
+ ++V + L M + Y +ID + + ++ M S G++P+
Sbjct: 260 RNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVV 319
Query: 199 TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KL 257
+ K S R E+AE +L EM ++ T +L+ + + G D+V + ++
Sbjct: 320 CYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 379
Query: 258 CESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
E DV I + K V+EA + K MS K +T YT +LK +
Sbjct: 380 LEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERW 439
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML 375
++L+ M + GC P+ ++ L+ + G VE+A LLK N P SY
Sbjct: 440 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIE-LLKQMLVNGCSPDLISYST 498
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++D K G ++ + M G + ++ A
Sbjct: 499 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASA 537
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 41 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 100
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 101 FREARSLIGEMKAAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 160
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 161 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 220
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 221 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 279
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 280 AMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 333
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYS 54
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE KL +A ++F R+ ++ Y
Sbjct: 55 NL-------------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 89
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 90 AMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREI 149
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 150 KCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 204
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 143/346 (41%), Gaps = 65/346 (18%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 12 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 68
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 69 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLT 128
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL---------- 151
V +A VF+ M++ + CN ++ +Y +L K AD L
Sbjct: 129 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 188
Query: 152 --------------------------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
LM+++N++ +Y ++ I G++ + + ++
Sbjct: 189 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 248
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M+S GIEP+S T + + + G+ ++A + +++ ++ + + ++ Y
Sbjct: 249 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERA 308
Query: 246 GKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
G R+ + N D + + G ++EEA VF++
Sbjct: 309 GLVAHAKRLLHELKRPDNIPRDTAIHILAGAG---RIEEATYVFRQ 351
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 148/362 (40%), Gaps = 13/362 (3%)
Query: 86 IPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK 144
+P R +V Y T+L ++A +F+ ++ +G T N +L +Y R+ +
Sbjct: 175 LPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGRS 234
Query: 145 --KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
+V +L M V+ F+ +I G+ + E +K+ G P T
Sbjct: 235 WPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNA 294
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR-----IWKL 257
L + + G +A +L+EME K T L YA G + A+ I K
Sbjct: 295 LLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKG 354
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
N + + A+G KV+EA A+F RM K T Y +L + +
Sbjct: 355 LLPNTF--TYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAA 412
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+++ +M+ SGC + W+ L+ + + G +E + +L+ + K + +Y ++
Sbjct: 413 MLEMLGEMSRSGCTPNRVTWNTLLAVCGKRG-MESYVTRVLEGMKSCKVELCRDTYNTLI 471
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVF 435
Y + G + K++ M G+ + L+ T A I +M+++
Sbjct: 472 CAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFK 531
Query: 436 PN 437
PN
Sbjct: 532 PN 533
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 152/394 (38%), Gaps = 52/394 (13%)
Query: 40 YGKALQLSEWL---ETNKKLDFIERDYASCLDLIAKLRGLQ-KAESYIQKIPESFRG--- 92
YG A ++ E L + KK FI Y + +L+ + G + + + ++ + E R
Sbjct: 369 YGNAGKVDEALALFDRMKKNGFIP--YTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCT 426
Query: 93 --EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL 150
V + TLLA C V MK + N L+ Y R + A +
Sbjct: 427 PNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKM 486
Query: 151 L-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M +Y L+++ + D T +V MKSEG +P+ + ++L + +
Sbjct: 487 YDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAK 546
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
GG EA+ KE+ N+ R L
Sbjct: 547 GGNAAGIEAIEKEVYQGNIFPSWVILRTL------------------------------- 575
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A K ++E E F+ + K ++L +YA + + SK ++ + + + G
Sbjct: 576 -VIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLG 634
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQ--------QQNKFKPMFSSYMLIMDQYA 381
+ +++L+ ++ + E +A+ IL + + QQ + KP SY +++ +
Sbjct: 635 LSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFC 694
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
K G I +++ M G + TLV Y
Sbjct: 695 KEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGY 728
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 133/318 (41%), Gaps = 15/318 (4%)
Query: 145 KVADVLLLMEK---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
VAD +M+K + F+Y +I + +DL QV M EG EP++ T +
Sbjct: 400 NVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYS 459
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----K 256
L GR +A +++EM + TC + ++G + R++ K
Sbjct: 460 TLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNK 519
Query: 257 LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
CE N + + + L KV A +F RMS+ +T Y AL+ + +++ +
Sbjct: 520 GCEPNVYTYTALISGLCVSGLLKV--AIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 577
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
++ M +G + ++ ++K + G+ +KA +++ Q +Y I
Sbjct: 578 YAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKA-MLVMNNMLQRGHSANLVTYNTI 636
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNV 434
+ Y G+ S +I MR G + L+ + I+ A+G+ + M D +
Sbjct: 637 IKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 696
Query: 435 FPNKALAAQVAQVDAFRK 452
PN+ A +D + K
Sbjct: 697 CPNE--VTYTALIDGYCK 712
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 141/366 (38%), Gaps = 11/366 (3%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVAD 148
F V Y L+ V +K A V N M G N+++ Y L D KK
Sbjct: 557 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAML 616
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
V+ M + +Y +I S + T ++++ M+ G +PD + L +
Sbjct: 617 VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 676
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLD 265
+ E A + EM D L + T L+ Y + K D + K P +
Sbjct: 677 KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 736
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I K N AE + K M + + YTA++ + S ++ +M
Sbjct: 737 TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
E GC L + +L++ + G+VE+A++ L +++ P +Y+ +++ Y G
Sbjct: 797 IEQGCLPNLLTYSSLIRALGQEGKVEEAEN-LFAELERHGLIPDEITYVKMIEAYIMSGK 855
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRA--DNVFPNKALAAQ 443
+ RM + G + L++ N Y + D+ A +V PN + Q
Sbjct: 856 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN----EYLLADQRLAALPDVVPNCSFGYQ 911
Query: 444 VAQVDA 449
DA
Sbjct: 912 TTDQDA 917
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 3/178 (1%)
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
P L + A I A K V +AE + K++ ++ T YT+++ + L +
Sbjct: 383 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 442
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
QMA+ GC + + L+ + G V +A L++ + P + +
Sbjct: 443 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD-LIREMILHGILPTAHTCTGPIIALC 501
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
G ++F M+ G + L+ + A G+ RM D VFPN
Sbjct: 502 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 42 MEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 101
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 102 FREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 161
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 162 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 221
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 222 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 280
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 281 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 334
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGD-------LVLYS 55
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE KL +A ++F R+ ++ Y
Sbjct: 56 NL-------------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 90
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 91 AMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREI 150
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 151 KCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 205
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/267 (18%), Positives = 109/267 (40%), Gaps = 43/267 (16%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 89 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 148
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL----------------------------- 151
+ + CN ++ +Y +L K AD L
Sbjct: 149 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 208
Query: 152 -------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
LM+++N++ +Y ++ I G++ + + +++ M+S GIEP+S T + +
Sbjct: 209 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 268
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNP 262
+ G+ ++A + +++ ++ + + ++ Y G R+ + N
Sbjct: 269 SIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNI 328
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKR 289
D + + G ++EEA VF++
Sbjct: 329 PRDTAIHILAGAG---RIEEATYVFRQ 352
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 12/292 (4%)
Query: 135 LILYKRLDK-KKVADVLLLMEKENV-KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
LI +K+L K V ++L + +N + + +LI G+ D G ++V+ M G
Sbjct: 106 LIRFKQLKKWHLVVEILDWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNG 165
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
P+ +Q L + Y GGR AEA+ + M+ + +T +++L + + K +
Sbjct: 166 YVPNVVSQTALMEAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKYREAE 225
Query: 253 RIWK--LCESN----PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
++ L + N P + I + K E+A F M++ + +T Y +L+
Sbjct: 226 ELFDNLLNDENSPLKPDQKMFNMMIYMYKKAGSYEKARKTFALMAERGIQQTTVTYNSLM 285
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
D+K +S ++ QM + +++ LV + + E+A ++ +
Sbjct: 286 SFETDYKEVS---NIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAV-FEEMLDAGV 341
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+P +Y +++D ++ G + + +F MR+ Y + T++ AY+NA
Sbjct: 342 RPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYVNA 393
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 50/321 (15%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVF-NRMKDKGFPVTSFA--CNQLLILYKRLDK 143
P +F Y+ +L V GN ++AEE+F N + D+ P+ N ++ +YK+
Sbjct: 203 PSAF----TYQIILKTFVQGNKYREAEELFDNLLNDENSPLKPDQKMFNMMIYMYKKAGS 258
Query: 144 -KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
+K LM + ++ T +Y L+ + D + + + M+ + PD + A+
Sbjct: 259 YEKARKTFALMAERGIQQTTVTYNSLMSFE---TDYKEVSNIYDQMQRADLRPDVVSYAL 315
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
L Y R+E+A A+ +EM ++ R +LL ++ G +Q ++K +
Sbjct: 316 LVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDR 375
Query: 263 WL-DVC--MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
+ D+C + A+ + +E AE FKR+ + + + Y L+K YA K
Sbjct: 376 YFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDDFEPNVVTYGTLIKGYA------KIN 429
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
DL M +K + +L++ + N+ + IMD
Sbjct: 430 DLEMVM-------------------------KKYEEMLVRGIKANQ-----TILTTIMDA 459
Query: 380 YAKRGDIHSTEKIFHRMRQVG 400
Y K GD S F M G
Sbjct: 460 YGKSGDFDSAVHWFKEMESNG 480
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 145/378 (38%), Gaps = 42/378 (11%)
Query: 44 LQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLAN 102
+++ +WL T DF + D+ + KL AE + + ++ + VV +T L
Sbjct: 119 VEILDWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYVPNVVSQTALME 178
Query: 103 CVA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVK 159
G AE +F RM+ G ++F +L + + +K + A+ L L+ EN
Sbjct: 179 AYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKYREAEELFDNLLNDENSP 238
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
L +PD ++ Y G EKA
Sbjct: 239 L---------------------------------KPDQKMFNMMIYMYKKAGSYEKARKT 265
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA--IEAWGKL 277
M +++ T L+ + + + + + P DV A + A+GK
Sbjct: 266 FALMAERGIQQTTVTYNSLMSFETDYKEVSNIYDQMQRADLRP--DVVSYALLVSAYGKA 323
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+ EEA AVF+ M + + K Y LL ++ M+ + + + K M ++
Sbjct: 324 RREEEALAVFEEMLDAGVRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSY 383
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
++ +V ++E A+ K Q+ F+P +Y ++ YAK D+ K + M
Sbjct: 384 TTMLSAYVNADDMEGAEK-FFKRLIQDDFEPNVVTYGTLIKGYAKINDLEMVMKKYEEML 442
Query: 398 QVGYVARFKQFQTLVQAY 415
G A T++ AY
Sbjct: 443 VRGIKANQTILTTIMDAY 460
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 11/138 (7%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK 155
Y T+L+ V ++++ AE+ F R+ F L+ Y K+ D+ ++M+K
Sbjct: 383 YTTMLSAYVNADDMEGAEKFFKRLIQDDFEPNVVTYGTLIKGYA-----KINDLEMVMKK 437
Query: 156 ------ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
+K Q ++D G+S D + M+S GI PD + +L +
Sbjct: 438 YEEMLVRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLSLPKT 497
Query: 210 GGRKEKAEAMLKEMEGDN 227
+E+A ++ +N
Sbjct: 498 DEEREEANELVGHFSENN 515
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 149/379 (39%), Gaps = 46/379 (12%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLANC 103
++ EWL+T DF E D+ + K KAE + + + V+ T L
Sbjct: 125 EILEWLQTQPWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSPSVISHTALMEA 184
Query: 104 VA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ 162
G KAE VF RM G P S QL++ + +E K +
Sbjct: 185 YGKGKQYNKAESVFRRMLSSG-PEPSALTYQLILK-------------IFVEGNKFKEAE 230
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+++ L+D + ++PD ++ Y G EKA +
Sbjct: 231 ETFETLLDDEKSP-----------------LKPDQKMFHMMIYMYRKAGNYEKARKIFGL 273
Query: 223 MEGDNLKEHRWTCRLLLPL---YAELGKA-DQVARIWKLCESNPWLDVCMAA--IEAWGK 276
M + + T L+ Y E+ K DQ+ R P DV A I A+GK
Sbjct: 274 MRERGVPQSTVTYNSLMSFETNYKEVSKTYDQMQR----AGLRP--DVVSYALLINAYGK 327
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+ EEA AVF+ M + + K Y LL +A M+ + + + K M C +
Sbjct: 328 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICS 387
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ ++ +V ++E A+ + +Q+ F+P +Y ++ YAK ++ + + M
Sbjct: 388 YTTMLSAYVNASDMEGAEK-FFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEM 446
Query: 397 RQVGYVARFKQFQTLVQAY 415
+ G A + ++ AY
Sbjct: 447 QVHGIKANQAIYTAMMDAY 465
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 6/184 (3%)
Query: 242 YAELGKADQVARIWKLCESNPWLDVC----MAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+ +L K V+ I + ++ PW D + + A+GK +AE VF M K
Sbjct: 114 FKQLKKWSLVSEILEWLQTQPWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYSP 173
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
S +TAL++ Y K +K + + ++M SG L + ++K+ VEG + ++A+
Sbjct: 174 SVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAEETF 233
Query: 358 --LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L +++ KP + +++ Y K G+ KIF MR+ G + +L+
Sbjct: 234 ETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMSFE 293
Query: 416 INAK 419
N K
Sbjct: 294 TNYK 297
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 130/313 (41%), Gaps = 14/313 (4%)
Query: 135 LILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ +K+L K + +L L + ++ + +L+ G+ D ++V M +G
Sbjct: 111 LVRFKQLKKWSLVSEILEWLQTQPWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKG 170
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
P + L + Y G + KAE++ + M + T +L+L ++ E K +
Sbjct: 171 YSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGNKFKEAE 230
Query: 253 RIWKLCESN------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
++ + P + I + K E+A +F M + ST Y +L+
Sbjct: 231 ETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLM 290
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
++K +SK D QM +G +++ L+ + + E+A ++ +
Sbjct: 291 SFETNYKEVSKTYD---QMQRAGLRPDVVSYALLINAYGKARREEEALAVF-EEMLDAGV 346
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYG 424
+P +Y +++D +A G + +F MR+ + T++ AY+NA A
Sbjct: 347 RPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEK 406
Query: 425 IRDRMRADNVFPN 437
R++ D PN
Sbjct: 407 FFRRLKQDGFEPN 419
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 106/256 (41%), Gaps = 7/256 (2%)
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSY 165
N +KA ++F M+++G P ++ N L+ + K+V+ M++ ++ SY
Sbjct: 261 AGNYEKARKIFGLMRERGVPQSTVTYNSLMSF--ETNYKEVSKTYDQMQRAGLRPDVVSY 318
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
+LI+ G++ V E M G+ P IL + G ++A + K M
Sbjct: 319 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKSMRR 378
Query: 226 DNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
D + +L Y +++ A++ R K P + I+ + K++ +E+
Sbjct: 379 DRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEK 438
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
++ M K + YTA++ Y +K K+M C + P +
Sbjct: 439 MMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEMG--FCGVPPDRKATNIL 496
Query: 343 LHVEGGEVEKADSILL 358
L + E EK ++ LL
Sbjct: 497 LSLAKTEAEKEEANLL 512
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 79 AESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEE---VFNRMKDKGFPVTSFACNQLL 135
+++Y Q R +VV LL N A ++ EE VF M D G T A N LL
Sbjct: 300 SKTYDQMQRAGLRPDVVSYALLIN--AYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 357
Query: 136 ILYK---RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
+ +D+ + V M ++ SY ++ ++D+ G ++ +K +G
Sbjct: 358 DAFAISGMVDQART--VFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 415
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
EP+ T L K Y EK +EM+ +K ++ ++ Y +
Sbjct: 416 FEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYGK 467
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 152/362 (41%), Gaps = 30/362 (8%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
+A L ++A+ R A + + +P E ++ L EV+ +D
Sbjct: 103 HAQLLHILARARRFHDARALLSSLPP--HAEPLFPHL-------------AEVY---RDF 144
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSNDLT 179
F SF L+L D +++ L + M K + + S L++ QS D
Sbjct: 145 TFSAVSFD----LLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPG 200
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
V M+ G+ PD T AI+AK Y GR +A ++EMEG L+ + ++
Sbjct: 201 MAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM 260
Query: 240 PLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
Y +G + RI + + +P + ++ + K ++EEAE V K M +T
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320
Query: 297 LSTK-HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ + Y ++ Y + + +M ++G H+ ++ ++ + G +E+
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ L+ + +P SY ++D Y + G + ++ M + G A + TL++ +
Sbjct: 381 V-LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGF 439
Query: 416 IN 417
+
Sbjct: 440 CS 441
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 129/332 (38%), Gaps = 8/332 (2%)
Query: 76 LQKAESYIQKIPES---FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
+++AE ++++ E+ EV Y ++ + A V N M+D G V F N
Sbjct: 304 MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYN 363
Query: 133 QLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
++ +L + ++V VL ME ++ ++SY LID + + ++ M
Sbjct: 364 TMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
G+ + T L K + S + A + M + + +C LL + GK +Q
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483
Query: 252 ARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
+WK + + I K+ ++ EAE + RM + + Y L
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
Y L L+ +M G +++ + H + K + I + + P
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG-LSP 602
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+Y ++ + K G++H ++ M G
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 119/306 (38%), Gaps = 12/306 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADVLL 151
V Y L+ +++AE V MK+ G V ++I +R V
Sbjct: 289 VTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRN 348
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + + F Y +I+ + + + +V++ M+ G+ PD + L Y G
Sbjct: 349 EMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREG 408
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
KA M + M + L T LL + L D R+W L P C
Sbjct: 409 SMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCS 468
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
++ K K E+A ++K + + ++ +++ ++L+ +M E
Sbjct: 469 TLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP---MFSSYM---LIMDQYAK 382
C L + L + + G++ A ++ K + F P MF+S++ I Q+ K
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG-FAPSVEMFNSFITGHFIAKQWHK 587
Query: 383 RGDIHS 388
DIHS
Sbjct: 588 VNDIHS 593
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 64/360 (17%), Positives = 138/360 (38%), Gaps = 33/360 (9%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+ + T++ + +AEE+ +RMK+ P S L Y +L + A L+
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK 559
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME + + I + ++ + M + G+ P+ T L + G
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGN 619
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---------------- 256
+A + EM + + + + C L+ + + GK D+ + +
Sbjct: 620 LHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTI 679
Query: 257 -----------LCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
+ + NP M + +G K ++ +A+++F+ + Y+
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
+L+ A + + L M +G + +++L+ + G++ +A ++ K Q +
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAY 423
P +Y ++D+Y K G K+ +M + GY+ + + L Q N P Y
Sbjct: 800 G-ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYME--EAIKLLDQMIENNVDPNY 856
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 144/325 (44%), Gaps = 7/325 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
+ TL+ +KKA +++ +GF + + L+ L K + K VA +L
Sbjct: 128 ITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRK 187
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+E +VK Y +I+ ++ L V M +GI PD T L + G
Sbjct: 188 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGH 247
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ----VARIWKLCESNPWLDVCM 268
++A ++L EM+ N+ + T +L+ ++ GK + +A + K C P +
Sbjct: 248 LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKAC-IKPDVFTYN 306
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ I+ + +++V+ A+ VF M++ + YT ++ KM+ + L ++M
Sbjct: 307 SLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHK 366
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ +++L+ + +E+A + L K ++ +P SY +++D K G +
Sbjct: 367 NMIPDIVTYNSLIDGLCKNHHLERAIA-LCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQ 413
++IF R+ GY + L+
Sbjct: 426 AKEIFQRLLAKGYHLNVHAYTVLIN 450
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 12/272 (4%)
Query: 94 VVYRTLLAN-CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL- 151
V Y TL+ C+ G+ +K+A + N MK K N L+ + K K A +LL
Sbjct: 233 VTYTTLIHGFCIMGH-LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLA 291
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+M K +K F+Y LID +++ V +M G+ PD +
Sbjct: 292 VMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTK 351
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC----ESNPWLDVC 267
++A ++ +EM+ N+ T L+ L K + R LC E DV
Sbjct: 352 MVDEAMSLFEEMKHKNMIPDIVTYNSLI---DGLCKNHHLERAIALCKRMKEQGIQPDVY 408
Query: 268 MAAI--EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I + K ++E+A+ +F+R+ L+ YT L+ + DL +M
Sbjct: 409 SYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKM 468
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ GC + +D +++ E E +KA+ IL
Sbjct: 469 EDKGCMPDAVTFDIIIRALFEKDENDKAEKIL 500
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 7 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 66
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 67 TAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 126
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 127 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 186
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 187 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 245
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 246 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 287
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 145/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 42 YNAMINVFGKAKLFREARSLISEMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMR 101
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 102 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 161
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 162 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 221
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + VE + +F+ M
Sbjct: 222 SIWGKVGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 255
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 256 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 305
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 306 AIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGYFPDSNVITVVLNAY 360
>gi|115458674|ref|NP_001052937.1| Os04g0450200 [Oryza sativa Japonica Group]
gi|113564508|dbj|BAF14851.1| Os04g0450200, partial [Oryza sativa Japonica Group]
Length = 292
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 57 DFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
D E DY +DLI ++ G AE + +K+P + Y LL + KAE +F
Sbjct: 3 DLSENDYGMRIDLITRVFGANAAEDFFEKLPACVQSLEAYTALLHSYARSKMTDKAERLF 62
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
RMKD + N+++ LY + + KV + ++++ F+Y + I S
Sbjct: 63 KRMKDANLSMNILVYNEMMTLYISVGELDKVPVIAEELKRQKFSPDLFTYNLRISASAAS 122
Query: 176 NDLTGMDQVVEAMKSEGIEPDSS----TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
DL G +++ M +P+S+ LA YV G+ + L E E +
Sbjct: 123 MDLEGFKGILDEMSK---DPNSNEGWKLYQNLAVIYVDAGQLVGSGNSLVEAEAKISRRE 179
Query: 232 RWTCRLLLPLYAELGKADQVARIWK 256
T L+ L+ LG D++ IWK
Sbjct: 180 WITYDFLVILHTGLGNRDRIKDIWK 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE F+++ + L + YTALL YA KM K + L K+M ++ + L ++ ++
Sbjct: 25 AEDFFEKLPACVQSL--EAYTALLHSYARSKMTDKAERLFKRMKDANLSMNILVYNEMMT 82
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM-RQVGY 401
L++ GE++K I + ++Q KF P +Y L + A D+ + I M +
Sbjct: 83 LYISVGELDKVPVIAEELKRQ-KFSPDLFTYNLRISASAASMDLEGFKGILDEMSKDPNS 141
Query: 402 VARFKQFQTLVQAYINA 418
+K +Q L Y++A
Sbjct: 142 NEGWKLYQNLAVIYVDA 158
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 42 MEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKL 101
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 102 FREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 161
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 162 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 221
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 222 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGVEPNSITYSTIISIWGKVGKLDRA 280
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 281 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 334
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 99/236 (41%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGD-------LVLYS 55
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE KL +A ++F R+ + Y
Sbjct: 56 NL-------------------------IELSRKLCDYSKAISIFSRLKXSGFXPDLVAYN 90
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 91 AMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREI 150
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 151 KCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 205
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/267 (17%), Positives = 109/267 (40%), Gaps = 43/267 (16%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 89 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 148
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL----------------------------- 151
+ + CN ++ +Y +L K AD L
Sbjct: 149 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 208
Query: 152 -------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
LM+++N++ +Y ++ I G++ + + +++ M+S G+EP+S T + +
Sbjct: 209 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTII 268
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNP 262
+ G+ ++A + +++ ++ + + ++ Y G R+ + N
Sbjct: 269 SIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNI 328
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKR 289
D + + G ++EEA VF++
Sbjct: 329 PRDTAIHILAGAG---RIEEATYVFRQ 352
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 155/359 (43%), Gaps = 20/359 (5%)
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
CLD+ R +QK Y+ +Y L++ ++ A +F++M++ G
Sbjct: 107 CLDV---FRWMQKQRWYVAD-------NGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCK 156
Query: 126 VTSFACNQLL--ILYKRLDKKKVADVLLLMEK----ENVKLTQFSYKILIDIKGQSNDLT 179
+ N L+ L+ R K +A L EK E + T +Y IL+ Q+ D
Sbjct: 157 PDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTK 216
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+D + + + + PD T + Y G ++ E++L M+ + T +L+
Sbjct: 217 QVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCRPDVITFNILI 276
Query: 240 PLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
Y D++ +++K + P + I +G+ E+AE+V ++M + K
Sbjct: 277 DSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFK 336
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ L+ +YA +SK + + ++ S + + +++++ + G +AD +
Sbjct: 337 PNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRL 396
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L A QQ P S+Y L+ Y K D +K+ RM + G V K F ++A+
Sbjct: 397 LDTALQQCVV-PNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKFFLDALEAF 454
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 13/192 (6%)
Query: 241 LYAELGKAD---QVARIWKLCESNPWL----DVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
L+ ELG+ D Q +++ + W + I G+ ++ A +F +M +
Sbjct: 94 LFEELGRRDAWLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNS 153
Query: 294 WKKLSTKHYTALLKVYADH----KMLSKGKDLVKQM-AESGCHIGPLAWDALVKLHVEGG 348
K T Y +L+ + K L+K ++M C + ++ L++ + G
Sbjct: 154 GCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAG 213
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
+ ++ D +L K ++ P +Y ++D Y K G I E + RM+ F
Sbjct: 214 DTKQVD-MLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCRPDVITF 272
Query: 409 QTLVQAYINAKT 420
L+ +Y +T
Sbjct: 273 NILIDSYGRKQT 284
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 41 MEQDRVPGDLVLYSNLIELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 100
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 101 FREARSLIGEMKXAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 160
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 161 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 220
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 221 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 279
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 280 AMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 333
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 99/236 (41%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYS 54
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE K +A ++F R+ ++ Y
Sbjct: 55 NL-------------------------IELSRKXCDYSKAISIFSRLKRSGFTPDLVAYN 89
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 90 AMINVFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREI 149
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 150 KCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 204
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/358 (17%), Positives = 143/358 (39%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 88 YNAMINVFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMR 147
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 148 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 207
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 208 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 267
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A + F+++ + ++
Sbjct: 268 SIWGKVGKLDRAAML--------------------------------FQKLRSSGXEIDQ 295
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 296 ILFQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 351
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 352 AIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGYFPDSDVIAXVLNAY 406
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 148/353 (41%), Gaps = 28/353 (7%)
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSN 176
KD F SF L+L D ++ D L + M K + T S L++ Q+
Sbjct: 88 KDFSFSAASFD----LLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAG 143
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D+ V + M+ G PD T AI+AK Y GR A LKEME L +
Sbjct: 144 DIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYH 203
Query: 237 LLLPLYAELGKADQVARIWKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
++ Y +G+ +VAR KL S +P + ++ + K ++EEAE V K +
Sbjct: 204 AVMDGYCRIGQT-EVAR--KLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEI 260
Query: 291 SKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE--- 346
+ K + Y AL+ Y + + +M ++G + ++ ++ + +
Sbjct: 261 KENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGR 320
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
GEVEK LL+A + SY ++D Y ++G + + M + G+
Sbjct: 321 MGEVEK----LLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTL 376
Query: 407 QFQTLVQAYIN--AKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
+ TL+ + + A A + M V PN+ + + +D F K +E
Sbjct: 377 TYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTL--LDGFFKAGKTE 427
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 137/350 (39%), Gaps = 14/350 (4%)
Query: 76 LQKAESYIQKIPESFR---GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
+++AE +++I E+ + EV Y L+ ++ A V + M D G V F N
Sbjct: 250 MEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYN 309
Query: 133 QLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
++ Y +L + +V +L E V L ++SY L+D + +T + + M
Sbjct: 310 TMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRN 369
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
G + T L + S G + A + M + + +C LL + + GK +Q
Sbjct: 370 GFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQA 429
Query: 252 ARIWK------LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
+WK L + ++ I K ++ EAE +F RM + + Y L
Sbjct: 430 LNLWKETLARGLARNVVTIN---TVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTL 486
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ Y L + + +M G +++ + + K + I ++ +
Sbjct: 487 IDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKG- 545
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
P +Y ++ + K G++H ++ M + G LV +
Sbjct: 546 LSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCF 595
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 148/383 (38%), Gaps = 41/383 (10%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADV 149
R V T++ + +AEE+F+RMK+ P S L+ Y +L D + +
Sbjct: 443 RNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQI 502
Query: 150 LLLMEK----ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
+ ME +V++ S+ + I QS + D VE M ++G+ P++ T L
Sbjct: 503 RIEMENLGFVPSVEMFN-SFITGLFIAKQSGKVN--DIRVE-MSAKGLSPNTVTYGALIA 558
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD 265
+ G A + EM LK + + C +L+ + GK D+ + + +
Sbjct: 559 GWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQ 618
Query: 266 VCMAA----------IEA------------WG-------KLNKVEEAEAVFKRMSKTWKK 296
C A+ IE+ W KL +V +A +F+ +
Sbjct: 619 DCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFI 678
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
Y++L+ + + L +M + + +++L+ + V +A S+
Sbjct: 679 PDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSL 738
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
K Q + P +Y ++D + K G+ K+ +M + G + L+
Sbjct: 739 FNKLQSKG-ISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLC 797
Query: 417 NAKTPAYGIR--DRMRADNVFPN 437
I+ D+M +NV PN
Sbjct: 798 TQGYMEEAIKLLDQMIENNVDPN 820
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 86/217 (39%), Gaps = 18/217 (8%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKK 144
IP++F Y +L+ C A ++ A + + M N L+ L K +
Sbjct: 678 IPDNF----TYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVS 733
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+ + ++ + + +Y LID + + T ++ + M EGI+P T IL
Sbjct: 734 RAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILI 793
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL 264
+ G E+A +L +M +N+ + T L+ YA G + +++ +
Sbjct: 794 HGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYN------EM 847
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
+C W V++AE V K LS H
Sbjct: 848 HICGLLPANW--TGHVKQAEPVVNS-----KNLSVGH 877
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 125/301 (41%), Gaps = 6/301 (1%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V Y ++ C G K+ E+F+ M G N LL + + + A L
Sbjct: 148 VTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSC 207
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + F+Y L+D + L +++ M ++ I P+ T + + Y G
Sbjct: 208 EMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAG 267
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE-SNPWLDVCM-- 268
R + A + EM+ + R + LL +YA+LG+ ++ + + E S DV
Sbjct: 268 RLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYN 327
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A + +GK K + VF+ M + Y+ L+ VY+ + + D+ ++ ++
Sbjct: 328 ALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKA 387
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + + AL+ + G VE A S LL + +P +Y I+D + + S
Sbjct: 388 GLKADVVLYSALIDALCKNGLVESAVS-LLDEMTKEGIRPNVVTYNSIIDAFGRPATTES 446
Query: 389 T 389
Sbjct: 447 V 447
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/340 (19%), Positives = 122/340 (35%), Gaps = 48/340 (14%)
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI--------------------------- 193
T +++ +I G+S ++ +MK G+
Sbjct: 111 TVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEI 170
Query: 194 ---------EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
+PD T L GG E A ++ EM + + +T LL +
Sbjct: 171 FDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCK 230
Query: 245 LGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
G+ D I + P + I+ + K ++++A +F M L
Sbjct: 231 GGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVS 290
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI--LLK 359
Y LL +YA + D+ ++M SG + ++AL+ + G+ K D + + +
Sbjct: 291 YNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGY---GKQYKYDVVRKVFE 347
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ P +Y ++D Y+K G +F ++ G A + L+ A
Sbjct: 348 EMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNG 407
Query: 420 T--PAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
A + D M + + PN + +DAF + A +E
Sbjct: 408 LVESAVSLLDEMTKEGIRPNVVTYNSI--IDAFGRPATTE 445
>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 426
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 132/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K+ G PD + +
Sbjct: 35 MEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMKTAGVIPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMIMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 274 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 327
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ + Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKNSGYTPDLVAYNAMIIV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I I G++ + + +++ M+S GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + + ++ Y G R+ + N D + + G ++EEA V
Sbjct: 286 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAG---RIEEATYV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ + + +K + ++ +M G ++ + +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/359 (18%), Positives = 154/359 (42%), Gaps = 9/359 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG-EVVYRTLL--ANCVAGNNVKKAEEVFNRM 119
Y C+ ++ + + +A ++++ + G +VV T+L A C AG + A E+F +M
Sbjct: 267 YTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGK-LDDAMELFVKM 325
Query: 120 KDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
K +L + D +V + ME + ++ IL++ ++ ++
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNI 385
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+++ M+ +G+ P+ T L + R + A + ME + +T L
Sbjct: 386 DEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILF 445
Query: 239 LPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ Y + G++D+ + K+ P + C A++ + ++ ++ EA+ +F R+
Sbjct: 446 IDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGL 505
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ Y ++K Y+ + + +L+ M+E+ C + ++L+ + G V++A
Sbjct: 506 APDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWK 565
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ + + K P +Y ++ K G + ++F M G F T++
Sbjct: 566 MFCRLKDM-KLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDC 623
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 141/346 (40%), Gaps = 13/346 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y + LD + L + + + ++ + + +V+ T+L N C AGN + +A + + M
Sbjct: 337 YITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGN-IDEAFHLLDVM 395
Query: 120 KDKGFPVTSFACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
+ +G N L L+ RLD D+ ME V T ++Y + ID G+S
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDD--ALDLFNNMETLGVVPTAYTYILFIDFYGKSG 453
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ E MK GI P+ GR +A+ + ++ + L T
Sbjct: 454 RSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYN 513
Query: 237 LLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
+++ Y++ G+ D+ + N P + V + I K +V+EA +F R+
Sbjct: 514 MMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDM 573
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ Y L+ + + +L M +GC + ++ ++ + EV+ A
Sbjct: 574 KLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLA 633
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
+L K N P ++ I+ + +FH+M+++
Sbjct: 634 LKMLYKMTTMNCM-PDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM 678
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 123/291 (42%), Gaps = 10/291 (3%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
F+Y +L+D G+S + + ++ E M +P++ T I+ + V +KA + +
Sbjct: 826 FTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYD 885
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWLDVCMAAIEAWGKL 277
+ + T LL + G+ ++ +++ C N + + I +GK
Sbjct: 886 LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNIL--INGFGKT 943
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
V A +FKRM + + K YT+L+ + + +++ ++G ++ +A+
Sbjct: 944 GDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAY 1003
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ ++ +E+A ++ + Q + +F+ LI++ G + K++ ++
Sbjct: 1004 NLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILN-LGVAGMVEQAGKLYEELQ 1062
Query: 398 QVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQ 446
+G + L++ Y + AY + RM PN AQ+
Sbjct: 1063 FIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 130/311 (41%), Gaps = 17/311 (5%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRL----DKKKVADVLLLMEKENVKLTQFSYKILID 170
VFN M+++ + N LI++K L ++ M + L +SY LI
Sbjct: 146 VFNLMQNQ---IIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIH 202
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK---EKAEAMLKEMEGDN 227
+ QS ++ M EG++P T + L V+ G++ E +++L+EME
Sbjct: 203 LLLQSGLCREALEMYRRMVLEGLKPSLKTFSALM---VATGKRRDTETVKSLLEEMESLG 259
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAE 284
LK + +T + + + G+ D+ RI K E + P + I+A K+++A
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+F +M + K Y +L ++D L + K+ +M G + + LV
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
+ G +++A LL ++ P +Y ++ + + +F+ M +G V
Sbjct: 380 CKAGNIDEAFH-LLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438
Query: 405 FKQFQTLVQAY 415
+ + Y
Sbjct: 439 AYTYILFIDFY 449
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 127/313 (40%), Gaps = 5/313 (1%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
++A E++ RM +G + + L++ KR D + V +L ME +K ++Y I
Sbjct: 211 REALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTIC 270
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I + G++ + ++++ M+ +G PD T +L + G+ + A + +M+ +
Sbjct: 271 IRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSH 330
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEA 285
K R T +L +++ G +V W E++ P + + A K ++EA
Sbjct: 331 KPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFH 390
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+ M K + Y L+ L DL M G + + +
Sbjct: 391 LLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYG 450
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
+ G +KA K + + P + + A+ G + + IF+R++ G
Sbjct: 451 KSGRSDKALETFEKMKIRG-IAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDS 509
Query: 406 KQFQTLVQAYINA 418
+ +++ Y A
Sbjct: 510 VTYNMMMKCYSKA 522
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 4/215 (1%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
K G++P + L + ++ E A + EM+ +T LLL + + GK
Sbjct: 782 KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKI 841
Query: 249 DQVARIWK--LCES-NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
+++ +++ +C S P I K N +++A +F + + Y L
Sbjct: 842 NELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPL 901
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
L L + K+L ++M + GC ++ L+ + G+V A L K +
Sbjct: 902 LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACE-LFKRMVREG 960
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+P SY ++ + G + F +++Q G
Sbjct: 961 IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTG 995
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 7/199 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y LD + K L++A+ +++ + +Y L+ +V A E+F RM
Sbjct: 898 YGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMV 957
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK---ENVKLTQFSYKILIDIKGQSND 177
+G + L+ + +V D L EK + L +Y ++ID G+S+
Sbjct: 958 REGIRPDLKSYTSLVGCL--CEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHR 1015
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + + M+S GI PD T L + G E+A + +E++ L+ + +T
Sbjct: 1016 IEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNA 1075
Query: 238 LLPLYAELGKADQVARIWK 256
L+ Y+ G +D ++K
Sbjct: 1076 LIRGYSMSGNSDSAYAVYK 1094
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 137/317 (43%), Gaps = 16/317 (5%)
Query: 112 AEEVFNRM----KDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFS 164
AE +F + +D F SF L+L D +++ L + M K + + S
Sbjct: 130 AEPLFPHLAEVYRDFTFSAVSFD----LLLRAHADAGQLSSALNVFDGMGKVGCRPSLRS 185
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
L++ QS D V M+ G+ PD T AI+AK Y GR +A ++EME
Sbjct: 186 CNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEME 245
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVE 281
G L+ + ++ Y +G + RI + + +P + ++ + K ++E
Sbjct: 246 GMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRME 305
Query: 282 EAEAVFKRMSKTWKKLSTK-HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
EAE V K M +T + + Y ++ Y + + +M ++G H+ ++ +
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTM 365
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ + G +E+ + L+ + +P SY ++D Y + G + ++ M + G
Sbjct: 366 INGLCKLGRMEEVQKV-LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424
Query: 401 YVARFKQFQTLVQAYIN 417
A + TL++ + +
Sbjct: 425 LAATTLTYNTLLKGFCS 441
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 129/332 (38%), Gaps = 8/332 (2%)
Query: 76 LQKAESYIQKIPES---FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACN 132
+++AE ++++ E+ EV Y ++ + A V N M+D G V F N
Sbjct: 304 MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYN 363
Query: 133 QLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
++ +L + ++V VL ME ++ ++SY LID + + ++ M
Sbjct: 364 TMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
G+ + T L K + S + A + M + + +C LL + GK +Q
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483
Query: 252 ARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
+WK + + I K+ ++ EAE + RM + + Y L
Sbjct: 484 LNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDG 543
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
Y L L+ +M G +++ + H + K + I + + P
Sbjct: 544 YCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG-LSP 602
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+Y ++ + K G++H ++ M G
Sbjct: 603 NLVTYGALIAGWCKEGNLHEACNLYFEMVNNG 634
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 119/306 (38%), Gaps = 12/306 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADVLL 151
V Y L+ +++AE V MK+ G V ++I +R V
Sbjct: 289 VTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRN 348
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + + F Y +I+ + + + +V++ M+ G+ PD + L Y G
Sbjct: 349 EMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREG 408
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
KA M + M + L T LL + L D R+W L P C
Sbjct: 409 SMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCS 468
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
++ K K E+A ++K + + ++ +++ ++L+ +M E
Sbjct: 469 TLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP---MFSSYM---LIMDQYAK 382
C L + L + + G++ A ++ K + F P MF+S++ I Q+ K
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG-FAPSVEMFNSFITGHFIAKQWHK 587
Query: 383 RGDIHS 388
DIHS
Sbjct: 588 VNDIHS 593
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/379 (17%), Positives = 145/379 (38%), Gaps = 39/379 (10%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+ + T++ + +AEE+ +RMK+ P S L Y +L + A L+
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNK 559
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME + + I + ++ + M + G+ P+ T L + G
Sbjct: 560 MEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGN 619
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---------------- 256
+A + EM + + + + C L+ + + GK D+ + +
Sbjct: 620 LHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTI 679
Query: 257 -----------LCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
+ + NP M + +G K ++ +A+++F+ + Y+
Sbjct: 680 EIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
+L+ A + + L M +G + +++L+ + G++ +A ++ K Q +
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV-----QAYINA 418
P +Y ++D+Y K G K+ +M + G + L+ Q Y+
Sbjct: 800 G-ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEE 858
Query: 419 KTPAYGIRDRMRADNVFPN 437
A + D+M +NV PN
Sbjct: 859 ---AIKLLDQMIENNVDPN 874
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 5/171 (2%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKK 144
+P++F Y +L+ C A ++ +A + + M G N L+ L K
Sbjct: 732 LPDNF----TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLS 787
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+ ++ ++ + + +Y LID + T ++ + M EGI+P T +IL
Sbjct: 788 RAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILI 847
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
+ G E+A +L +M +N+ + T L+ Y + G +++++++
Sbjct: 848 YGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLY 898
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 115/310 (37%), Gaps = 12/310 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y L+A N+ +A ++ M + G F C+ L+ + + K A+ L+L
Sbjct: 605 VTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN-LVLQ 663
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ N+ + I+I S VV+ + + ++ GR
Sbjct: 664 KLVNIDMIPGCSISTIEIDKIS-------HVVDTIADGNPHSANVMWNVIIFGLCKSGRI 716
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAA 270
A+++ + + +T L+ A G D+ + + S P + +
Sbjct: 717 ADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSL 776
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I K K+ A +F ++ + Y L+ Y ++ L ++M E G
Sbjct: 777 IYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGI 836
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + L+ G +E+A LL +N P + +Y ++ Y K G++
Sbjct: 837 QPTVITYSILIYGLCTQGYMEEAIK-LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 895
Query: 391 KIFHRMRQVG 400
K++ M G
Sbjct: 896 KLYDEMHIRG 905
>gi|410110127|gb|AFV61143.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
origanoides]
Length = 408
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 41 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 100
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 101 FREARSLISEMKTAGVMPNTTSYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNI 160
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 161 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 220
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 221 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 279
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 280 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 333
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYS 54
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE KL +A ++F R+ ++ Y
Sbjct: 55 NL-------------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 89
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 90 AMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLXMYVENKKFLEALSVFSEMREI 149
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 150 KCLLDLXTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 204
>gi|410110083|gb|AFV61121.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
cujabensis]
Length = 359
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 7 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 66
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 67 TXGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 126
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 127 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 186
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 187 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 245
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 246 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 287
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/344 (18%), Positives = 140/344 (40%), Gaps = 44/344 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ Y TLL V +A VF+ M+
Sbjct: 42 YNAMINVFGKAKLFREARSLISEMKTXGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 101
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 102 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 161
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 162 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 221
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + VE + +F+ M
Sbjct: 222 SIWGKVGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 255
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 256 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 305
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
A + K +F + ++ +Y K ++ ++F +MR +GY
Sbjct: 306 AIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGY 346
>gi|15229739|ref|NP_187745.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|12322901|gb|AAG51439.1|AC008153_12 hypothetical protein; 6614-8314 [Arabidopsis thaliana]
gi|332641514|gb|AEE75035.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 541
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Query: 19 GNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQK 78
GN +S + + NLR KAL+ S W+ K + DYA+ L L K+ GL++
Sbjct: 373 GNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTEKVLGLEE 432
Query: 79 AESYIQ-KIPESFRGEVVYRTLLANCVA--GNNVKKAEEVFNRMKDKGFPVTSFACNQLL 135
AE++ + IPE+ + VY TLL+ C A N KAE VF +M++ G N L+
Sbjct: 433 AENFFESSIPENMKDYSVYDTLLS-CYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLI 491
Query: 136 ILYKRLDKKKVADVLLL-MEKENVK 159
LY K V ++LL M+ +N++
Sbjct: 492 SLYSGQGKLSVVNILLCDMKHKNIE 516
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 177/444 (39%), Gaps = 96/444 (21%)
Query: 34 LRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGE 93
LR+ +AL++S+W+ K + E D+++ L K+ L++AE + + IPE+ R E
Sbjct: 85 LRSSNRPRQALEVSDWMVEQKMYNLPE-DFSARFHLTEKVLNLEEAEKFFESIPENMRFE 143
Query: 94 VVYRTLL---ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADV 149
+Y +LL A +KKAE VF +MK G + N + LY L ++ KV ++
Sbjct: 144 SMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPSPYNSMTSLYSSLGNRDKVDEI 203
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
L M++ NV+L + + + +D+ MD+ + A + E D T +AK Y
Sbjct: 204 LREMKENNVELDNVTVNNALRVYAAVSDVATMDKFL-ADRKEITRLDGLTMLAMAKAYE- 261
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV--C 267
L+ LY E G+ + V R+W ++ D
Sbjct: 262 ----------------------------LMSLYGEAGEIEDVHRVWDKYKATRQKDNEEF 293
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWK----KLSTKHYTALLKVYADHKMLSKGKDLV- 322
I + KL + AE ++ W+ + + L+ Y + M+ K LV
Sbjct: 294 RTLIGSLLKLGDTKGAEKIY---YNEWECSGLEFDNRIPDMLVSGYREKGMVMKADKLVN 350
Query: 323 ----------------KQMAESGCHIGPLAWDALVKLHVEGGEVEKA------------- 353
++M + G + P L+K + ++ KA
Sbjct: 351 KTLWIRGLATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVF 410
Query: 354 --------------DSILLKAQQQNKFKPM-------FSSYMLIMDQYAKRGDIHS-TEK 391
+ +L + +N F+ +S Y ++ YA+ + S E
Sbjct: 411 NLFSEDYATRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEA 470
Query: 392 IFHRMRQVGYVARFKQFQTLVQAY 415
+F +MR++G ++ F +L+ Y
Sbjct: 471 VFEKMRELGLQSKLSPFNSLISLY 494
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 151/363 (41%), Gaps = 43/363 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
VVY LL + +VF M +G L+ R K KK A V+ +
Sbjct: 165 VVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDM 224
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + ++ +Y +LI+ + + + + M +G++PD T L S
Sbjct: 225 MTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLE 284
Query: 213 KEKAEAMLKEM-EGDN-LKEHRWT--------CRL--------LLPLYAELG-KADQVA- 252
++A A+L+EM +G+ ++ T C++ + + AE G + + VA
Sbjct: 285 MDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAF 344
Query: 253 --------RIWKLCESNPWLDVCMAA------------IEAWGKLNKVEEAEAVFKRMSK 292
R+ K+ ++ +D ++ I + K+ +VE AE+ M
Sbjct: 345 NLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRH 404
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ HY LLK D M+ + +DL +M + C + A+ ++ + GE +
Sbjct: 405 QGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKI 463
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
A+ LK P +Y + ++ +AK GD+ + E++ +M G+V F +L+
Sbjct: 464 AEE-FLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLI 522
Query: 413 QAY 415
Q Y
Sbjct: 523 QGY 525
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y+ ++ K+R +++AESY+ ++ PE V Y LL + +A ++F
Sbjct: 379 YSILINGFCKMRQVERAESYLSEMRHQGMEPEP----VHYIPLLKAMCDQGMMGQARDLF 434
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQS 175
N M D+ + + A + ++ + +KK+A+ L M E + +Y I I++ +S
Sbjct: 435 NEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKS 493
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
DL ++V++ M + G PD + L + Y + G EK + +EM
Sbjct: 494 GDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREM 541
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 2/172 (1%)
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
++++ M S G++PDS T +IL + + E+AE+ L EM ++ LL
Sbjct: 362 ELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAM 421
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE--AEAVFKRMSKTWKKLSTK 300
+ G Q ++ + N LD + G E+ AE K M
Sbjct: 422 CDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAV 481
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
Y+ + ++A L+ + ++KQM SG +D+L++ + G+ EK
Sbjct: 482 TYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEK 533
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 133/327 (40%), Gaps = 5/327 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLM 153
VY L+A V V A F +M G F N L+ + +R + ++ M
Sbjct: 190 VYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQM 249
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E E ++ F+Y +L+D + + ++++ MK +G+ P +T L +
Sbjct: 250 EGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLER 309
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAIE 272
+KA ML + G H C +L ++ A + K + +L D I
Sbjct: 310 DKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIV 369
Query: 273 AWGKLNKVEEAE--AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
L +E ++ + K Y ++K + K SK + M G
Sbjct: 370 MSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGL 429
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
++++ ++ V+ G V+KA+ I+ K Q F P ++ ++ Y+K G++H+ +
Sbjct: 430 LSSVMSYNMVIDCFVKAGAVDKAEEIV-KEMQDKGFLPNLVTFNTLISGYSKLGNVHNAK 488
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYIN 417
+ + + G++ F +L+ N
Sbjct: 489 VVLKMLMEHGFMPDIITFTSLIDGLCN 515
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 35/260 (13%)
Query: 74 RGLQKAESYI-QKIPESFRGEVVYRTLLANC-VAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
+ KA Y+ + + V+ ++ +C V V KAEE+ M+DKGF
Sbjct: 412 KNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTF 471
Query: 132 NQLLILYKRLDKKKVADVLLLMEKENVKLTQF-SYKILIDIKGQSNDLTGMDQVVEAMKS 190
N L+ Y +L A V+L M E+ + ++ LID ++ L E M
Sbjct: 472 NTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE 531
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
G+ P++ T +L S G KA +L +M+ D + ++ L+
Sbjct: 532 WGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALI----------- 580
Query: 251 VARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
L C ++ KV++AE +F M + + Y +L+K
Sbjct: 581 -------------LSFC--------RMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALC 619
Query: 311 DHKMLSKGKDLVKQMAESGC 330
D + ++K K+++ SGC
Sbjct: 620 DERRVNKAKEILFARERSGC 639
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
CE + L VC A +E+WG+L A VF +M + + ST Y AL+ +
Sbjct: 149 CEVSEEL-VC-ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDT 206
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+QM GC +++LV G V++A L++ + +P +Y +++
Sbjct: 207 AYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVR-LVRQMEGEGIRPNVFTYTMLV 265
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
D + G + ++ +M++ G ++TLV
Sbjct: 266 DGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHG 302
>gi|91806413|gb|ABE65934.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 279
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Query: 19 GNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQK 78
GN +S + + NLR KAL+ S W+ K + DYA+ L L K+ GL++
Sbjct: 111 GNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYATRLHLTEKVLGLEE 170
Query: 79 AESYIQ-KIPESFRGEVVYRTLLANCVA--GNNVKKAEEVFNRMKDKGFPVTSFACNQLL 135
AE++ + IPE+ + VY TLL+ C A N KAE VF +M++ G N L+
Sbjct: 171 AENFFESSIPENMKDYSVYDTLLS-CYARSSNTQSKAEAVFEKMRELGLQSKLSPFNSLI 229
Query: 136 ILYKRLDKKKVADVLLL-MEKENVK 159
LY K V ++LL M+ +N++
Sbjct: 230 SLYSGQGKLSVVNILLCDMKHKNIE 254
>gi|115465970|ref|NP_001056584.1| Os06g0111300 [Oryza sativa Japonica Group]
gi|113594624|dbj|BAF18498.1| Os06g0111300 [Oryza sativa Japonica Group]
Length = 978
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 157/371 (42%), Gaps = 32/371 (8%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-ME 154
Y LL VA +V AE+ F + + G P F CN LL LY RL A L+L M
Sbjct: 453 YSALLRCHVAKEDVDAAEDTFRALSNYG-PPDVFCCNDLLRLYMRLGHLDKARALILKMR 511
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-----IEP-DSSTQAILAKHYV 208
KE ++ + ++++ +++ D + E +++EG + P DSST +++ K +
Sbjct: 512 KEALQFDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMMLKSLL 571
Query: 209 --SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA------------ELGKADQVARI 254
GG ++ ++K + E ++ L L A + G+A Q+ +
Sbjct: 572 DKPGGLSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQQLEQA 631
Query: 255 WKLCESNPWL-----DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
KL E+ V A ++A + K EEA +F + + L+
Sbjct: 632 QKLFETASTSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHL 691
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM 369
L + +M SG ++ ++ ++ +GG++EKA + AQ+ P+
Sbjct: 692 TKQGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGL--PI 749
Query: 370 FS-SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIR 426
+Y ++ Y K G H +F RM++ G F T++ AY + A I
Sbjct: 750 DEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIF 809
Query: 427 DRMRADNVFPN 437
M+ +N P+
Sbjct: 810 QEMQKNNHVPD 820
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 120/298 (40%), Gaps = 7/298 (2%)
Query: 76 LQKAESYIQKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL 134
L++A+ + SF G VY ++ ++A +F + D+G + + L
Sbjct: 628 LEQAQKLFETASTSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISIL 687
Query: 135 LI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
+ L K+ + M + + ++ I+I + GQ L ++ A + G+
Sbjct: 688 VTHLTKQGKLYSAVSIYDRMISSGIPRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGL 747
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR 253
D T + Y G+ +A + M+ D ++ + + ++ YA G ++
Sbjct: 748 PIDEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEI 807
Query: 254 IWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
I++ + N P +A I A+ + +AE + M ++ S H+ L+ +
Sbjct: 808 IFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFL 867
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ + + + QM E+G ++++H++ G V+ D IL KP
Sbjct: 868 KEGQIDEAQRMYNQMEEAGIPADLACCRTMMRMHLDHGYVD--DGILFFETACRLLKP 923
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 44/329 (13%)
Query: 69 LIAKLRGLQKAESYI--QKIPESFRGEVVYRTLLANCVAG-NNVKKAEEVFNRMKDKGFP 125
++ +LRG ++A + K+ + VV T+L VK AE F M G
Sbjct: 143 VLHELRGWRQARDFFAWMKLQLCYEPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCE 202
Query: 126 VTSFACNQLLILYKR--------------------------------LDKKKV-ADVLLL 152
+ AC LL Y R L K+K+ V+ L
Sbjct: 203 PDAVACGTLLCAYARWGKLNDMLMFYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHL 262
Query: 153 MEK---ENVKLTQFSYKILIDIKGQSNDLT-GMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
E+ NV QF+Y ++I + L MD E MK P+ +T ++L
Sbjct: 263 WEQMLEANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGE-MKRRRFVPEEATYSLLISLCA 321
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLD 265
G+ E+A + EM+ ++ +TC +L LY + + ++ E N P
Sbjct: 322 KHGKGEEALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEV 381
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ + +GKL E+A+ +F+ + K + Y A+ +V+ + + + ++ M
Sbjct: 382 IYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAM 441
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKAD 354
++ AL++ HV +V+ A+
Sbjct: 442 RARNVKPSQFSYSALLRCHVAKEDVDAAE 470
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 109/280 (38%), Gaps = 6/280 (2%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y IL+ + GQ + + M G EPD+ L Y G+ +
Sbjct: 172 AYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFYAAV 231
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKV 280
++ ++ + +V +W ++ E+N P I ++ K +
Sbjct: 232 RRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKEGML 291
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
EEA F M + Y+ L+ + A H + L +M ++
Sbjct: 292 EEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCASV 351
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ L+ + + KA S L +QNK P Y +++ Y K G +++F + + G
Sbjct: 352 LTLYYKNEDYSKALS-LFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAG 410
Query: 401 YVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNK 438
++ + + + Q ++N + A + D MRA NV P++
Sbjct: 411 LLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQ 450
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/293 (18%), Positives = 116/293 (39%), Gaps = 29/293 (9%)
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
VL M NVK +QFSY L+ D+ + A+ + G PD L + Y+
Sbjct: 437 VLDAMRARNVKPSQFSYSALLRCHVAKEDVDAAEDTFRALSNYG-PPDVFCCNDLLRLYM 495
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE-------------LGKADQVARIW 255
G +KA A++ +M + L+ C +L + + + +++
Sbjct: 496 RLGHLDKARALILKMRKEALQFDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVL 555
Query: 256 KLCESNPWLDVCMAAIEAWGKLNKV-------------EEAEAVFKRMSKTWKKLSTKHY 302
+S+ + + ++ G L+ V +EA+ +++ +++ K
Sbjct: 556 NPTDSSTLSMMLKSLLDKPGGLSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAI 615
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
L+ Y + L + + L + A + +G ++A+V G+ E+A + ++
Sbjct: 616 ATLIVQYGQAQQLEQAQKLF-ETASTSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELID 674
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Q + +L+ K+G ++S I+ RM G + F ++ Y
Sbjct: 675 QGHNGDAVTISILVT-HLTKQGKLYSAVSIYDRMISSGIPRSMQTFNIMISVY 726
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 139/354 (39%), Gaps = 16/354 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
V Y T++ ++ A F +++ G + ++ CN LL+ Y R D +K +L++
Sbjct: 180 VTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMM 239
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + ++SY ILI ++ + +V M +G + +L K GR
Sbjct: 240 MPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGR 299
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVC 267
A +L EM + WT ++ Y + G+ I L C + W
Sbjct: 300 IHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNS 359
Query: 268 MAAIEAWGKLNKVEEA--EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ GKL++ EE A+ + + T +T L+ Y + + + M
Sbjct: 360 LIYGLCGGKLDEAEELLNGAIARGFTPT-----VITFTNLINGYCKAERIDDALRVKSNM 414
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
S C + A+ L+ + ++ +++A L N P Y I+D Y K G
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCRLKEAKET-LNEMFANGLAPNVVIYTSIIDGYCKVGM 473
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
+ + ++F M G + +L+ I K A + +M+ D + P
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPG 527
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/398 (18%), Positives = 154/398 (38%), Gaps = 47/398 (11%)
Query: 47 SEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCV 104
S + +N KLD + Y ++++ K L++A+ + ++ + V+Y +++
Sbjct: 412 SNMISSNCKLDL--QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYC 469
Query: 105 AGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLT 161
V A EVF M+ +G ++ L+ Y + KK+ + L M+++ +
Sbjct: 470 KVGMVGAALEVFKLMEHEGCHPNAWTYGSLI--YGLIQDKKLHKAMALITKMQEDGITPG 527
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
+Y LI + + ++ ++ E M+ G+ PD +L GR E+A + L
Sbjct: 528 VIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV 587
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVE 281
+G L + +T + ++ + K +
Sbjct: 588 R-KGVVLTKVTYT----------------------------------SLVDGFSKAGNTD 612
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
A + ++M K Y+ LL+ K L++ ++ QM SG +A+ ++
Sbjct: 613 FAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIII 672
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ G+ + A S L + KP ++Y + + Y K G I E + M + G
Sbjct: 673 SEMIKEGKHDHAKS-LFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGV 731
Query: 402 VARFKQFQTLVQ--AYINAKTPAYGIRDRMRADNVFPN 437
+ + ++ A+ RM + PN
Sbjct: 732 TPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPN 769
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 109/269 (40%), Gaps = 13/269 (4%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M V + ++Y +ID +S + + M+ G PD T L + + GG+
Sbjct: 310 MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI-YGLCGGK 368
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
++AE +L T L+ Y + + D R+ +SN C ++
Sbjct: 369 LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRV----KSNMISSNCKLDLQ 424
Query: 273 AWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
A+G L +++EA+ M + YT+++ Y M+ ++ K M
Sbjct: 425 AYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLM 484
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
GCH + +L+ ++ ++ KA +++ K Q++ P +Y ++ K+ +
Sbjct: 485 EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITK-MQEDGITPGVIAYTTLIQGQCKKHE 543
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ ++F M + G + + L A
Sbjct: 544 FDNAFRLFEMMEKNGLTPDEQAYNVLTDA 572
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 19/218 (8%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K + +Y + I + + + ++ M+ +G+ PD T I G ++A +
Sbjct: 697 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFS 756
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKAD-------------QVARIWKLCES----- 260
LK M + + + WT LLL + ++ + ++ +W+L E
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHG 816
Query: 261 -NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
NP + + I + K ++EEA + M + + YT L+K D K+ K
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDV 876
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
V M E G ++ L+ + G+ ++A S+
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLF 914
>gi|326520353|dbj|BAK07435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 652
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 13/334 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
V Y LL ++ A + M+ +G F+ + LL R A L L
Sbjct: 120 VPYNLLLRAASRAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHLDHALTFLPL 179
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD-SSTQAILAKHYVSGG 211
ME + V + LI + ++ D + +++ GI PD + A +A + S
Sbjct: 180 MEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSDL 239
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCESNPWLDVC 267
++ +L ++ D + + +L A G+ ++ + P L V
Sbjct: 240 LRDAKRLLLHDVPADGVAPDAESYAPVLAALARRGRHLAAVSLFSHMRAVARVKPDLSVF 299
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM-- 325
+ A+G+L+ +A+ +F M + S Y +L+VY D + + L M
Sbjct: 300 NIVLNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMYS 359
Query: 326 --AESGCHIGP--LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
++ G + P + ++ ++ +H + E +KA S L++ Q + +P +Y ++ +
Sbjct: 360 TASDGGTVVRPNVVTYNTMIAIHGKALEDDKAGS-LVQQMQASGIQPNAVTYSTVLSIWV 418
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
K G + K+F ++R+ G +QT+V AY
Sbjct: 419 KAGKLDRAAKLFDKLRESGTEMDPVLYQTMVVAY 452
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 63/369 (17%), Positives = 145/369 (39%), Gaps = 51/369 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGF---------PVTSFACNQLLILYKRL--- 141
V++ L+ + + KA +F+R++ G + ++ + LL KRL
Sbjct: 190 VLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSDLLRDAKRLLLH 249
Query: 142 ---------DKKKVADVLLLMEKENVKLTQFS-----------------YKILIDIKGQS 175
D + A VL + + L S + I+++ GQ
Sbjct: 250 DVPADGVAPDAESYAPVLAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAYGQL 309
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM------EGDNLK 229
+ D++ +M+ G+ P T + + Y G +A + M G ++
Sbjct: 310 DLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMYSTASDGGTVVR 369
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAV 286
+ T ++ ++ + + D+ + + +++ P + W K K++ A +
Sbjct: 370 PNVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIWVKAGKLDRAAKL 429
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
F ++ ++ ++ Y ++ Y ++S+ K L++++ I + +K+
Sbjct: 430 FDKLRESGTEMDPVLYQTMVVAYERAGLVSQSKRLLRELRHPDQAI---PKETAMKILAS 486
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
G VE+A + +A + K S + +M +AK S ++F MR++G++ +
Sbjct: 487 AGRVEEAAWLFRRAVHTGEVKDP-SVHRAMMALFAKNRRHRSVVEVFDEMRKLGHLPDSE 545
Query: 407 QFQTLVQAY 415
+ AY
Sbjct: 546 TIAVTMNAY 554
>gi|15218232|ref|NP_175000.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75268143|sp|Q9C545.1|PPR72_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g43010
gi|12321535|gb|AAG50822.1|AC026757_3 hypothetical protein [Arabidopsis thaliana]
gi|12323053|gb|AAG51513.1|AC068324_1 hypothetical protein [Arabidopsis thaliana]
gi|332193817|gb|AEE31938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 257
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
Query: 7 SIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASC 66
SI L ++ ++G +++ + + + NL + + AL+ S+W+ + D D A+
Sbjct: 51 SIIPLLEQWRKQGYEVNPSHLRGLIKNLSDCKNFTTALEASKWMFKHSVFDNFPEDCAAQ 110
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAG-NNVKKAEEVFNRMKDKGFP 125
L L+ + GL++AE + IPE R Y LL++ V KAE F +M++ GF
Sbjct: 111 LHLVNTVLGLEEAEKMFKNIPEKMRD---YSVLLSSYTKPVRTVDKAEATFKKMRELGFL 167
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+ + N ++ LY +L + + + LL ++K N+++ ++ ++ M++
Sbjct: 168 LKPYLFNSMICLYGQLQRLDMVEKLLYKLKKNNMEVGSLKVN---NVSRVYANINAMEKF 224
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+ EGIE + T +AK Y G EKA
Sbjct: 225 KTWVSKEGIELERDTIVAMAKAYHRAGSIEKA 256
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 131/320 (40%), Gaps = 8/320 (2%)
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLLLMEKENV 158
L NC ++AE +F M+D G + A N LL Y + + A+ V+ ME+ V
Sbjct: 316 LGNC---GRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGV 372
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+ +Y +LID G + V++ M++ ++P++ + + Y G +K
Sbjct: 373 LPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQ 432
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK--LCES-NPWLDVCMAAIEAWG 275
+L+EME ++ R +L+ + + D + L E P ++
Sbjct: 433 VLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHC 492
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
K K + AE +F+ M + + ++ + D + K+L+ M G +
Sbjct: 493 KAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAV 552
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
+ L+ ++ + G + A L + KP + Y +++ YA+RG F
Sbjct: 553 TYTTLIDIYGKSGRFDDAIECL-DDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWA 611
Query: 396 MRQVGYVARFKQFQTLVQAY 415
MR G +L+ A+
Sbjct: 612 MRDDGLKPSLLALNSLINAF 631
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 161/377 (42%), Gaps = 32/377 (8%)
Query: 76 LQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL 135
Q AESY + +P G + + L + C + +++ A V + ++ C
Sbjct: 121 FQLAESY-RVVP----GPLWHSLLKSLCTSSSSIPLAYAVVSWLQKHNL------CFSYE 169
Query: 136 ILYKRL-----DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
+LY L +K+ + LL +K+N LT +Y LI ++ND+ ++ M+
Sbjct: 170 LLYSILIHALGQSEKLYEAFLLSQKQN--LTPLTYNALISACARNNDIEKALNLICRMRE 227
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKA--EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+G D +++ + + R + + + +E++ D L+ ++ +A+ G
Sbjct: 228 DGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDL 287
Query: 249 DQVARIWKLCESNPWLDVCMAAIEA--WGKLN--KVEEAEAVFKRMSKTWKKLSTKHYTA 304
D+ + + + L V A + WG N + EEAEA+F+ M + T+ Y A
Sbjct: 288 DKALEFLGVVQGSG-LSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNA 346
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS--ILLKAQQ 362
LL+ Y +L + +V +M SG + L+ + G E+ +S I+LK +
Sbjct: 347 LLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAY---GNAERWESARIVLKEME 403
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKT 420
+ +P + I+ Y +G+ T ++ M G + L+ + N
Sbjct: 404 ASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLD 463
Query: 421 PAYGIRDRMRADNVFPN 437
A DRM ++ + P+
Sbjct: 464 HAMATFDRMLSEGIEPD 480
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 9/324 (2%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + L K L+ AE + ++ S E Y L+ + A V
Sbjct: 342 RAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKE 401
Query: 119 MKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M+ ++ +++L Y+ + + +K VL ME V+ + Y +LID G+ N
Sbjct: 402 MEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNC 461
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L + M SEGIEPD+ T L + G+ ++AE + +EM T +
Sbjct: 462 LDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNI 521
Query: 238 LLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ + + + D V + S L + I+ +GK + ++A M
Sbjct: 522 MINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAG 581
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K S+ Y ALL YA + + M + G LA ++L+ + G + +
Sbjct: 582 LKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLI--NAFGKDRRDVE 639
Query: 355 S-ILLKAQQQNKFKPMFSSYMLIM 377
+ ++L+ ++N KP +Y +M
Sbjct: 640 AFVVLQYMKENDLKPDVVTYTTLM 663
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-- 151
+ Y L+ N + A F+RM +G + N L+ + + K A+ L
Sbjct: 447 IFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEE 506
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+MEK + ++ I+I+ G + ++ M+S+G+ P++ T L Y G
Sbjct: 507 MMEKGYLPCNT-TFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSG 565
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ-VARIWKLCESN--PWLDVCM 268
R + A L +M+ LK LL YA+ G +DQ V+ W + + P L
Sbjct: 566 RFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALN 625
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ I A+GK + EA V + M + K YT L+K + K + ++M S
Sbjct: 626 SLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILS 685
Query: 329 GC 330
GC
Sbjct: 686 GC 687
>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
macrophylla]
Length = 381
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 7 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 66
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 67 TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 126
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 127 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 186
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 187 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 245
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 246 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 287
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 3/202 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 42 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 101
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 102 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 161
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 162 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 221
Query: 240 PLYAELGKADQVARIWKLCESN 261
++ ++GK D+ A +++ S+
Sbjct: 222 SIWGKVGKLDRAAMLFQKLRSS 243
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 139/360 (38%), Gaps = 44/360 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y+S + + K R + KAE+++++ +P+++ Y L+ + K+A VF
Sbjct: 261 YSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNW----TYNNLIYGYSSTGQWKEAVRVF 316
Query: 117 NRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ N L+ L K K+ DV M + FSYKI+++
Sbjct: 317 KEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATK 376
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L M + + M +GI PD T ++L K Y + G +KA + EM +K
Sbjct: 377 GCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVK------ 430
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
P + I A ++ K+++A F +M
Sbjct: 431 --------------------------PDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
Y L++ + H L K K+L+ ++ +G + + + +++ + G + A +
Sbjct: 465 APDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
I + P Y ++MD Y G + ++F M G + TLV Y
Sbjct: 525 IFDLTVNVGQ-HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 115/292 (39%), Gaps = 16/292 (5%)
Query: 136 ILYKRL---DKKKVADVLLLMEKENVKLTQ---FSYKILIDIKGQSNDLTGMDQVVEAMK 189
IL K L K AD LL M E + +Y +ID + D+ + + M
Sbjct: 191 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMV 250
Query: 190 SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD 249
GI PD T + + KAEA L++M + WT L+ Y+ G+
Sbjct: 251 QRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWK 310
Query: 250 QVARIWK------LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
+ R++K + L++ M ++ +G K++EA VF M+ + Y
Sbjct: 311 EAVRVFKEMRRHSILPDVVTLNMLMGSLCKYG---KIKEARDVFDTMAMKGQNPDVFSYK 367
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
+L YA L DL M G + L+K + G ++KA I+ +
Sbjct: 368 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKA-MIIFNEMRD 426
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ KP +Y ++ + G + + F++M G + L+Q +
Sbjct: 427 HGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGF 478
>gi|356575428|ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 562
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 132/292 (45%), Gaps = 12/292 (4%)
Query: 135 LILYKRLDK-KKVADVLLLMEKENV-KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
LI +K+L K V ++L + +N + + +LI G+ D G ++V+ M G
Sbjct: 107 LIRFKQLKKWNLVVEILEWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNG 166
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
P+ +Q L + Y GGR AEA+ + M+ + +T +++L + + K +
Sbjct: 167 YAPNVVSQTALMEAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKFREAE 226
Query: 253 RIWK--LCESN----PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
++ L + N P + I K E+A F +M++ + +T Y +L+
Sbjct: 227 ELFDNLLNDENSPLKPDQKMFNMMIYMHKKAGSYEKARKTFAQMAELGIQQTTVTYNSLM 286
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
++K +S ++ QM + +++ LV + + E+A ++ +
Sbjct: 287 SFETNYKEVS---NIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAV-FEEMLDAGI 342
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+P +Y +++D ++ G + + +F MR+ Y + T++ AYINA
Sbjct: 343 RPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINA 394
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 130/322 (40%), Gaps = 52/322 (16%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVF-NRMKDKGFPVTSFA--CNQLLILYKRLDK 143
P +F Y+ +L V GN ++AEE+F N + D+ P+ N ++ ++K+
Sbjct: 204 PSAF----TYQIILKTFVQGNKFREAEELFDNLLNDENSPLKPDQKMFNMMIYMHKKAGS 259
Query: 144 -KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
+K M + ++ T +Y L+ + +++ + + M+ + PD + A+
Sbjct: 260 YEKARKTFAQMAELGIQQTTVTYNSLMSFETNYKEVS---NIYDQMQRADLRPDVVSYAL 316
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP 262
L Y R+E+A A+ +EM ++ R +LL ++ G
Sbjct: 317 LVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFSISG---------------- 360
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
VE+A+ VFK M + YT +L Y + + +
Sbjct: 361 ----------------MVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINADDMEGAEKFF 404
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVE----KADSILLKAQQQNKFKPMFSSYMLIMD 378
K++ + G + + L+K + + ++E K + +L++ + N+ + IMD
Sbjct: 405 KRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQ-----TILTTIMD 459
Query: 379 QYAKRGDIHSTEKIFHRMRQVG 400
Y K GD S F M G
Sbjct: 460 AYGKSGDFDSAVHWFKEMESNG 481
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 145/378 (38%), Gaps = 42/378 (11%)
Query: 44 LQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLAN 102
+++ EWL T DF + D+ + KL AE + + ++ + VV +T L
Sbjct: 120 VEILEWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNKNGYAPNVVSQTALME 179
Query: 103 CVA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVK 159
G AE +F RM+ G ++F +L + + +K + A+ L L+ EN
Sbjct: 180 AYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKFREAEELFDNLLNDENSP 239
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
L +PD ++ + G EKA
Sbjct: 240 L---------------------------------KPDQKMFNMMIYMHKKAGSYEKARKT 266
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA--IEAWGKL 277
+M +++ T L+ + + + + P DV A + A+GK
Sbjct: 267 FAQMAELGIQQTTVTYNSLMSFETNYKEVSNIYDQMQRADLRP--DVVSYALLVSAYGKA 324
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+ EEA AVF+ M + + K Y LL ++ M+ + + + K M ++
Sbjct: 325 RREEEALAVFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSY 384
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
++ ++ ++E A+ K Q+ F+P +Y ++ YAK D+ K + M
Sbjct: 385 TTMLSAYINADDMEGAEK-FFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEML 443
Query: 398 QVGYVARFKQFQTLVQAY 415
G A T++ AY
Sbjct: 444 MRGIKANQTILTTIMDAY 461
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK 155
Y T+L+ + ++++ AE+ F R+ GF L+ Y K+ D+ ++M+K
Sbjct: 384 YTTMLSAYINADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYA-----KINDLEMVMKK 438
Query: 156 ------ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K Q ++D G+S D + M+S GI PD + +L
Sbjct: 439 YEEMLMRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVL 492
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 166/402 (41%), Gaps = 20/402 (4%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y C+D K+ + A + ++ + +V Y +++ N + +A E+F +M+
Sbjct: 134 YNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQME 193
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVK---LTQFSYKILIDIKGQSND 177
++A N +++ Y K + L+E++ K + +Y ++ G+
Sbjct: 194 QNRQVPCAYAYNTMIMGYG--SAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGK 251
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
++ E MK + + P+ T I+ G E A + M+ L + T +
Sbjct: 252 TDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINI 310
Query: 238 LLPLYAELGKADQVARI-----WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
++ + K D+ I +K+C +P + I+ GK +V++A +++RM
Sbjct: 311 MIDRLCKAQKLDEACSIFEGMDYKVC--SPDGATFCSLIDGLGKQGRVDDAYRIYERMLD 368
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ + YT+L++ + G + K+M SGC + + + + GE EK
Sbjct: 369 ADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEK 428
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+ L + + F P SY +++ K G T ++++ M+ G V + + T++
Sbjct: 429 GRA-LFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVI 487
Query: 413 QAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAFRK 452
+ + AY + + M+ P V VD K
Sbjct: 488 DGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSV--VDGLAK 527
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/316 (18%), Positives = 129/316 (40%), Gaps = 6/316 (1%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYK 166
N E++ M GF T++ C +L+ K + D+L +M + +Y
Sbjct: 6 NFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
LI + + M + M+ G E + L + + GR + A ++L EM+ +
Sbjct: 66 TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSN 125
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL--DVCMAAIEA-WGKLNKVEEA 283
+ + + ++GK D + + ++N + DV ++ K N+++EA
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEA 185
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F++M + + Y ++ Y + L+++ GC +A++ ++
Sbjct: 186 VEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTC 245
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ G+ +KA I + + P +Y +I+ K G++ + K+ M++ G
Sbjct: 246 LGKKGKTDKALRIF--EEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFP 303
Query: 404 RFKQFQTLVQAYINAK 419
+ ++ A+
Sbjct: 304 NVRTINIMIDRLCKAQ 319
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 67/362 (18%), Positives = 143/362 (39%), Gaps = 13/362 (3%)
Query: 65 SCLDLIA---KLRGLQKAESYIQKIPE-SFRGEV-VYRTLLANCVAGNNVKKAEEVFNRM 119
+C++L+A K R L +A +Q + FR Y TL+ + +FN+M
Sbjct: 28 TCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQM 87
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFS-YKILIDIKGQSNDL 178
++ G+ V L+ ++ R + A LL K N Y + ID G+ +
Sbjct: 88 QELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKV 147
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+ MK+ G+ PD T + R ++A + ++ME + + +
Sbjct: 148 DMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTM 207
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMA---AIEAWGKLNKVEEAEAVFKRMSK-TW 294
+ Y GK D+ + + + + +A + GK K ++A +F+ M +
Sbjct: 208 IMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM 267
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
L T Y ++ + + + M E+G + ++ + ++++A
Sbjct: 268 PNLPT--YNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEAC 325
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
SI + P +++ ++D K+G + +I+ RM + + +L++
Sbjct: 326 SI-FEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRN 384
Query: 415 YI 416
+
Sbjct: 385 FF 386
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 110/256 (42%), Gaps = 8/256 (3%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
SY ILI ++ ++ AMK +G D+ + + G+ KA +L+EM
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LD--VCMAAIEAWGKLNKV 280
+ T ++ A++ + D+ +++ +SN L+ + + I+ +GK+ +V
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRV 566
Query: 281 EEAEAVFKRMSKTWKKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+EA V + M + K L+ YT LL + +++ + M + C + +
Sbjct: 567 DEAYLVMEEMMQ--KGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYC 624
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L+ + + KA + + Q+ KP +Y ++ AK G++ +F R R
Sbjct: 625 ILINGLCKVRKFNKA-FVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRA 683
Query: 399 VGYVARFKQFQTLVQA 414
G + + +++
Sbjct: 684 SGGIPDSASYNAMIEG 699
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 129/342 (37%), Gaps = 45/342 (13%)
Query: 103 CVAGNNVKKAEEVFNRMKDKG-FPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKL 160
C AGN V+ A +V + MK+ G FP + I+ RL K +K+ + + E + K+
Sbjct: 281 CKAGN-VEAAFKVRDAMKEAGLFPNV----RTINIMIDRLCKAQKLDEACSIFEGMDYKV 335
Query: 161 TQ---FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
++ LID G+ + ++ E M P+ L +++ RKE
Sbjct: 336 CSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGH 395
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKL 277
M KEM R C L L N ++D A E
Sbjct: 396 KMYKEM-------MRSGCSPDLMLL------------------NTYMDCVFKAGE----- 425
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
E+ A+F+ + T+ Y+ L+ + +L M + GC + A+
Sbjct: 426 --TEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAY 483
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ ++ + G+V KA LL+ + P +Y ++D AK + +F +
Sbjct: 484 NTVIDGFCKSGKVNKAYQ-LLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAK 542
Query: 398 QVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
G + +L+ + + AY + + M + PN
Sbjct: 543 SNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPN 584
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 131/310 (42%), Gaps = 5/310 (1%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKI 167
++++ ++ + D G+P + N L+ + K D V + K ++ T S+
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
LI +S D+ ++ M+SEG+ PD T + L GR ++ + EM G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAE 284
L + T L+ + GK D + +++ + P L A I K+ ++EA
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+ M+ + K +T L+ + ++ ++M E G + +A+ AL+
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
G V A +L FKP +Y +++D + K+GD+ K+ M+ G+V
Sbjct: 469 CREGRVHDAGRMLTDMLSAG-FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527
Query: 405 FKQFQTLVQA 414
+ L+
Sbjct: 528 VVTYNALMNG 537
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 141/350 (40%), Gaps = 28/350 (8%)
Query: 79 AESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL-- 134
A +IP+ R VV + TL++ C +V++ + M+ +G F + L
Sbjct: 267 ARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALIN 326
Query: 135 -LILYKRLDKKKVADVLLLMEKENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAMKSE 191
L RLD+ + + M + ++ LID KG DL + + M ++
Sbjct: 327 GLCKEGRLDEGSL--LFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKN--FQMMLAQ 382
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
G+ PD T L G ++A ++ EM LK + T L+ + G +
Sbjct: 383 GVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESA 442
Query: 252 ARI-WKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
I ++ E LD A I + +V +A + M K YT ++
Sbjct: 443 LEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDC 502
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ + G L+K+M G G + ++AL+ + G+++ A +LL A P
Sbjct: 503 FCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNA-KMLLDAMLNVGVAP 561
Query: 369 MFSSYMLIMDQYAKRG-----DIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+Y +++D ++K G DI ++EK G V + + LV
Sbjct: 562 NDITYNILLDGHSKHGSSVDVDIFNSEK--------GLVTDYASYTALVN 603
>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
brasiliensis]
Length = 382
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 67
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 68 TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 127
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 187
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 188 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 246
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 247 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 288
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 145/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 43 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 102
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 103 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 162
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 222
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + VE + +F+ M
Sbjct: 223 SIWGKVGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 256
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 257 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 306
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 307 AIDAGEVKDITVFERMIHLLSKYKKYXNV---VEVFDKMRGLGYFPDSNVIAVVLNAY 361
>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
macropoda]
Length = 427
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 130/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 42 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKL 101
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 102 FREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 161
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 162 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 221
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 222 IEQNVVTYNSMXMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 280
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 281 AMLFQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 334
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 100/236 (42%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYS 55
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE KL +A ++F R+ K+ Y
Sbjct: 56 NL-------------------------IELSRKLCDYSKAISIFSRLKKSGFTPDLVAYN 90
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 91 AMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREI 150
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 151 KCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 205
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 173 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 232
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I G++ + + +++ M+S GIEP+S T + + + G+ ++A + +++ +
Sbjct: 233 XMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGI 292
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + + ++ Y G R+ + N D + + G ++EEA V
Sbjct: 293 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAG---RIEEATYV 349
Query: 287 FKR 289
F++
Sbjct: 350 FRQ 352
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 139/341 (40%), Gaps = 8/341 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y+S ++ + K + + KAE + Q + R + Y L+ K++ VF M
Sbjct: 191 YSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMS 250
Query: 121 DKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
CN + L K K+ D+ M + K SY L+ + +
Sbjct: 251 SSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIA 310
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
GMD + M EG+ PD L Y G +K+ M ++M + T ++
Sbjct: 311 GMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVI 370
Query: 240 PLYAELGKADQ-VARIWKLCESNPWLDVCMAAIEAWGKLNK---VEEAEAVFKRMSKTWK 295
+ LG+ D + + + ++ D + + G+ N+ V+ E + +SK
Sbjct: 371 SAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIP 430
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K +T+++ +++GKD+V + +G + +++LV + G +++A
Sbjct: 431 PPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVG 490
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
LL + + +P +Y ++D Y K G I +F M
Sbjct: 491 -LLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 530
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 143/360 (39%), Gaps = 23/360 (6%)
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKK-AEEVFNRMKDKGFP- 125
D A RGL + S + + P S A +V A E+F RM P
Sbjct: 68 DAPAPARGLNELLSALARAPPS--------------AACRDVPALAVELFKRMDRCACPE 113
Query: 126 --VTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
T + N L+ Y+R + + V + + + FSY LID + ++
Sbjct: 114 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 173
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+ M+ +GI P+ T + L +KAE +L++M G ++ + T L+ Y
Sbjct: 174 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 233
Query: 243 AELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
+ G + R++K S+ P + C + + A K +++EA +F M K
Sbjct: 234 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 293
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ALL YA ++ +L M G ++ L+ + G ++K+ ++ +
Sbjct: 294 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS-LLMFE 352
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ P ++ ++ + + G + + F+ M G + L+Q N +
Sbjct: 353 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 412
>gi|78708864|gb|ABB47839.1| expressed protein [Oryza sativa Japonica Group]
gi|215701127|dbj|BAG92551.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 341
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 156/389 (40%), Gaps = 67/389 (17%)
Query: 49 WLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNN 108
W+ L D A+ L+LI K+ GL +A Y +P+ + + Y +LL N
Sbjct: 2 WMTERLHLHLSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANC 61
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
V+KAEE+F +M+ G +S+A N ++ LY +
Sbjct: 62 VEKAEELFEKMRGMGM-ASSYAYNVMMRLYLQ---------------------------- 92
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
GQ + M Q AM+ GI PD ST L V+ RK+K
Sbjct: 93 ---NGQVERVHSMHQ---AMEESGIVPDVSTTHTL----VAVLRKKKT------------ 130
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE-SNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
L A A+ + I + E +N + M I K+N + AE +
Sbjct: 131 ------------LVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDMVGAEKAY 178
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ ++ L+ Y ++ K + LV Q + G L + +
Sbjct: 179 EEWESKHVYHDSRLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGYFKV 238
Query: 348 GEVEKADSILLK--AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
G+V KA + K A N++ P ++ ++ ++ +A++ ++ + E++ ++++ R
Sbjct: 239 GQVSKAADLTKKALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTR- 297
Query: 406 KQFQTLVQAYINAKTPAYGIRDRMRADNV 434
+ L++ Y+NA P + RM+ D +
Sbjct: 298 DIYHGLLKTYVNAGKPVSDLLHRMKKDGM 326
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 133/327 (40%), Gaps = 5/327 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLM 153
VY L+A V V A F +M G F N L+ + +R + ++ M
Sbjct: 190 VYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQM 249
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E E ++ F+Y +L+D + + ++++ MK +G+ P +T L +
Sbjct: 250 EGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLER 309
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAIE 272
+KA ML + G H C +L ++ A + K + +L D I
Sbjct: 310 DKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIV 369
Query: 273 AWGKLNKVEEAE--AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
L +E ++ + K Y ++K + K SK + M G
Sbjct: 370 MSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGL 429
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
++++ ++ V+ G V+KA+ I+ K Q F P ++ ++ Y+K G++H+ +
Sbjct: 430 LSSVMSYNMVIDCFVKAGAVDKAEEIV-KEMQDKGFLPNLVTFNTLISGYSKLGNVHNAK 488
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYIN 417
+ + + G++ F +L+ N
Sbjct: 489 VVLKMLMEHGFMPDIITFTSLIDGLCN 515
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 35/260 (13%)
Query: 74 RGLQKAESYI-QKIPESFRGEVVYRTLLANC-VAGNNVKKAEEVFNRMKDKGFPVTSFAC 131
+ KA Y+ + + V+ ++ +C V V KAEE+ M+DKGF
Sbjct: 412 KNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTF 471
Query: 132 NQLLILYKRLDKKKVADVLLLMEKENVKLTQF-SYKILIDIKGQSNDLTGMDQVVEAMKS 190
N L+ Y +L A V+L M E+ + ++ LID ++ L E M
Sbjct: 472 NTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAE 531
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
G+ P++ T +L S G KA +L +M+ D + ++ L+
Sbjct: 532 WGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALI----------- 580
Query: 251 VARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
L C ++ KV++AE +F M + + Y +L+K
Sbjct: 581 -------------LSFC--------RMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALC 619
Query: 311 DHKMLSKGKDLVKQMAESGC 330
D + ++K K+++ SGC
Sbjct: 620 DERRVNKAKEILFARERSGC 639
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
CE + L VC A +E+WG+L A VF +M + + ST Y AL+ +
Sbjct: 149 CEVSEEL-VC-ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDT 206
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+QM GC +++LV G V++A L++ + +P +Y +++
Sbjct: 207 AYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVR-LVRQMEGEGIRPNVFTYTMLV 265
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
D + G + ++ +M++ G ++TLV
Sbjct: 266 DGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHG 302
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 145/336 (43%), Gaps = 14/336 (4%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL----MEKENVKLTQFSYKILID 170
+F+ M++K + + L+ K+ + D L ME++ V Y LI+
Sbjct: 2 LFDEMREKALSPDRYTYSTLI---THFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIE 58
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ + D + + +K G PD + + A +++ EM +
Sbjct: 59 LSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMP 118
Query: 231 HRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVF 287
+ + LL +Y E K + ++ ++ E LD+ C I+ +G+L +EA+ +F
Sbjct: 119 NASSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 178
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
M K + + Y LL+VY D ++ + L + M + +++++ ++ +
Sbjct: 179 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 238
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 239 LEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQIL 297
Query: 408 FQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 298 FQTMIXAYERAGLVAHAKRLLHELKRPDNIPRDTAI 333
>gi|357476703|ref|XP_003608637.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509692|gb|AES90834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 715
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 3/260 (1%)
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAE 217
V+L +Y +I + N E M G+ PD T + + Y G+ E+
Sbjct: 221 VELDNITYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYARLGKVEEVV 280
Query: 218 AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAW 274
+ + K T +L ++ E G D + + + +S P L V +EA
Sbjct: 281 NLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAM 340
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
GK K A ++F+ M + + K TA++K+Y + +L K+M E+G +
Sbjct: 341 GKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGWPMDF 400
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+ ++ L+ + + G +E+A+++ +Q KP SY +++ Y G + K+F
Sbjct: 401 ILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFE 460
Query: 395 RMRQVGYVARFKQFQTLVQA 414
M + G L+Q
Sbjct: 461 EMSKFGIELNVMGCTCLIQC 480
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 151/354 (42%), Gaps = 7/354 (1%)
Query: 67 LDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGF 124
++++ K L+KA +I + F+ VV Y T++ + N++ A + + M+ KG
Sbjct: 234 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 293
Query: 125 PVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
S+ L+ + K ++ + + M + + +Y LID DL
Sbjct: 294 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 353
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ M +GI P ST +L GR +A+ M+KEM + T +L+ Y+
Sbjct: 354 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 413
Query: 244 ELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
G A + + S P + I + N+++EA+ +F+++
Sbjct: 414 RCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 473
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+ A++ + + + + L+K+M + ++ L++ G+VE+A +LL
Sbjct: 474 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA-RMLLDE 532
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ KP SY ++ Y +RGDI ++ M +G+ + L++
Sbjct: 533 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 154/428 (35%), Gaps = 85/428 (19%)
Query: 89 SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK----- 143
S + +V+ L+ C +A + F MK+KG CN +L L+ +L++
Sbjct: 153 SVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 212
Query: 144 -------------------------------KKVADVLLLMEKENVKLTQFSYKILIDIK 172
KK + + ME K SY +I
Sbjct: 213 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 272
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
++ G ++++AM+ +GIEPDS T L GR E+A + +M L +
Sbjct: 273 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 332
Query: 233 WTCRLLLPLYAELGKA-------DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
T L+ Y G D++ + + P + + A ++ EA+
Sbjct: 333 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM----PSVSTYNLLVHALFMEGRMGEADD 388
Query: 286 VFKRMSK--------TW-------------------------KKLSTKH--YTALLKVYA 310
+ K M K T+ K + H YT+L+ V +
Sbjct: 389 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 448
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
+ + DL +++ + G + ++A+V H G VE+A +LLK + P
Sbjct: 449 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA-FMLLKEMDRKSVPPDE 507
Query: 371 SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDR 428
++ +M + G + + M++ G + TL+ Y A+ +RD
Sbjct: 508 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 567
Query: 429 MRADNVFP 436
M + P
Sbjct: 568 MLSIGFNP 575
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 237 LLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL+ + EL +AD+ + + + + P ++ C + + KLN++E A ++ M +
Sbjct: 162 LLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRL 221
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ + ++ V L K ++ + M G ++++ ++ + G +E A
Sbjct: 222 RISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 281
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
IL A + +P +Y ++ K G + +F +M ++G V + TL+
Sbjct: 282 RRIL-DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 340
Query: 414 AYINAKT--PAYGIRDRMRADNVFPN 437
Y N A+ RD M + P+
Sbjct: 341 GYCNKGDLERAFSYRDEMVKKGIMPS 366
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 89 SFRGEVVYRTLLANCVAGN----------NVKKAEEVFNRMKDKGFPVTSFACNQLLILY 138
S+R E+V + ++ + N + +A+++ M+ KG + N L+ Y
Sbjct: 353 SYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 412
Query: 139 KRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
R + KK D+ M + ++ T +Y LI + + N + D + E + +G+ PD
Sbjct: 413 SRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 472
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI--- 254
+ + + G E+A +LKEM+ ++ T L+ GK ++ AR+
Sbjct: 473 IMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE-ARMLLD 531
Query: 255 -WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
K P I +G+ +++A V M + Y AL+K ++
Sbjct: 532 EMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQ 591
Query: 314 MLSKGKDLVKQMAESG 329
++L+K+M G
Sbjct: 592 EGDLAEELLKEMVNKG 607
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 142/347 (40%), Gaps = 36/347 (10%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
+Y TL+ N +++AE +F MK+K T+ N L+ Y +RL + V +LL M
Sbjct: 384 IYETLMKAYCKSNQIEEAEGLFVEMKEKSLQATTTTYNILMDAYSRRLQTEVVESLLLEM 443
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTG-MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ ++ + SY LI G+ ++G + MK +GI+P SS+ L Y + G
Sbjct: 444 QDLGIRPSARSYNCLISAYGRQKKMSGKAENAFLRMKRDGIKPLSSSYNALLFAYAANGL 503
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
EKA A+ +M+ + LK T LL G +++ WK E
Sbjct: 504 HEKAHAIYMDMKREGLKPTLETYTALLDTLRRAGDTEKLMETWK-----------TMVDE 552
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
+G + + ++ A H + + +D++ + + G
Sbjct: 553 KFGGTRVI---------------------FHMVIDCLAKHGLYLQVRDVIYEFGKMGLKP 591
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ ++ L+ + GG+ K LLK + KP +Y ++ YA+ D
Sbjct: 592 TVMTYNILMNAYGRGGQHYKLPQ-LLKEMTALELKPDSITYCTMIYAYARVRDFSRAFYY 650
Query: 393 FHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKA 439
+M + G + + ++ L+ ++ K I+D+ + K+
Sbjct: 651 HKQMVRNGQIPDPRSYKKLLNT-LDVKAARKNIKDKSAIQGIIKGKS 696
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 135/345 (39%), Gaps = 17/345 (4%)
Query: 83 IQKIP--ESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR 140
+ ++P FR V+Y ++ A E+F M+ +L + K+
Sbjct: 264 VARLPLERDFREVVLYNAAISAVAYCRRYDGAWEIFELMEKNNVQPDHGTSAIMLNIMKK 323
Query: 141 LDKKKVADVLLLMEKENVKLTQFSYKI---LIDIKGQSNDLTGMDQVVEA-MKSEGIEPD 196
K D ++ N K +S+ + LI+I S+ L ++++ M+ GI +
Sbjct: 324 -SKVSAKDAWEFFKRMNRKGVNWSFDVGAALINIFC-SDGLKKEALIIQSEMEKRGIASN 381
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
+S L K Y + E+AE + EM+ +L+ T +L+ Y+ + + V +
Sbjct: 382 TSIYETLMKAYCKSNQIEEAEGLFVEMKEKSLQATTTTYNILMDAYSRRLQTEVVESL-- 439
Query: 257 LCESN-----PWLDVCMAAIEAWGKLNKVE-EAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
L E P I A+G+ K+ +AE F RM + K + Y ALL YA
Sbjct: 440 LLEMQDLGIRPSARSYNCLISAYGRQKKMSGKAENAFLRMKRDGIKPLSSSYNALLFAYA 499
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
+ + K + M G + AL+ G+ EK K KF
Sbjct: 500 ANGLHEKAHAIYMDMKREGLKPTLETYTALLDTLRRAGDTEKLMET-WKTMVDEKFGGTR 558
Query: 371 SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ +++D AK G + + ++G + L+ AY
Sbjct: 559 VIFHMVIDCLAKHGLYLQVRDVIYEFGKMGLKPTVMTYNILMNAY 603
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
++A FKRM++ S AL+ ++ + + + +M + G ++ L
Sbjct: 329 KDAWEFFKRMNRKGVNWSFDVGAALINIFCSDGLKKEALIIQSEMEKRGIASNTSIYETL 388
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+K + + ++E+A+ + ++ ++++ + ++Y ++MD Y++R E + M+ +G
Sbjct: 389 MKAYCKSNQIEEAEGLFVEMKEKS-LQATTTTYNILMDAYSRRLQTEVVESLLLEMQDLG 447
Query: 401 YVARFKQFQTLVQAYINAKTPAYGIRD---RMRADNVFP 436
+ + L+ AY K + + RM+ D + P
Sbjct: 448 IRPSARSYNCLISAYGRQKKMSGKAENAFLRMKRDGIKP 486
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 9/253 (3%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y ++D GQ ++ MK+ ++ T IL + YV G +A M
Sbjct: 96 AYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRM 155
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVE 281
E N K + +L+ + +A Q + + P + V + W + +
Sbjct: 156 EDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNIS 215
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EAE VF M K + Y+ ++ +++ D+ +M ++GC + +++L+
Sbjct: 216 EAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLM 275
Query: 342 KLHVEGGEVEKADSILLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++HV+ G EK +L+ Q K +P +Y +++ + K ++ K+ M +
Sbjct: 276 RIHVKAGRTEK----VLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAK 331
Query: 399 VGYVARFKQFQTL 411
G F TL
Sbjct: 332 KGCAPNASTFNTL 344
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 132/350 (37%), Gaps = 46/350 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRMK 120
++ + ++ + R +A+ + + + F +V+ T L C AGN + +AE VF MK
Sbjct: 167 FSILISILCRERRASQAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGN-ISEAERVFGEMK 225
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G K NV ++Y I+ID + +T
Sbjct: 226 VAGI------------------------------KPNV----YTYSIVIDSLCRCGQITR 251
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+ M G +P+S T L + +V GR EK + +M+ + T L+
Sbjct: 252 AHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIE 311
Query: 241 LYAELGKADQVARIWKL-----CESN-PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+ + + ++ L C N + I KL V A ++K+M +
Sbjct: 312 THCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCI---AKLGDVNAAHRMYKKMKELN 368
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ +T Y L+K++ K L +M E+ + L+ ++ G A
Sbjct: 369 CEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAY 428
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
+ + +P Y +++ Q K G + E++ +M G+V R
Sbjct: 429 KFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKHEELVEKMVDRGFVTR 478
>gi|410110103|gb|AFV61131.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
alba]
Length = 419
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 41 MEQDRVPGDLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKL 100
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 101 FREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 160
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 161 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 220
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 221 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 279
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G FQT++ AY A A+ R + R DN+ + A+
Sbjct: 280 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 333
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 100/236 (42%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYS 54
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE KL +A A+F R+ ++ Y
Sbjct: 55 NL-------------------------IELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYN 89
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 90 AMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREI 149
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 150 KCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 204
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 172 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 231
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M+S GIEP+S T + + + G+ ++A + +++ +
Sbjct: 232 MMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 291
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + + ++ Y G R+ + N D + + G ++EEA V
Sbjct: 292 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAG---RIEEATYV 348
Query: 287 FKR 289
F++
Sbjct: 349 FRQ 351
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 113/267 (42%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y +I+ G + + ++ + M G+ PD T I+ + +G +
Sbjct: 216 MLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQ 275
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA A + M+G N+ +T +++ + G+ + + K + P +
Sbjct: 276 YSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSMREKRTQCPPDVVTY 335
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ + ++ KVE+ +AVF M K + Y ALL YA M + + K + +
Sbjct: 336 TSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQ 395
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G +++ L+ + G+ EKA K ++N +P SY ++D Y G
Sbjct: 396 NGLRPDVVSYTTLLNAYGRSGQPEKAREA-FKEMRKNSCRPNIVSYNALIDAYGSAGMFK 454
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+ H M + G TL+ A
Sbjct: 455 EAISLLHEMEKDGIPPDVVSISTLLTA 481
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 147/372 (39%), Gaps = 21/372 (5%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
P++F +V L+ + G +A E+ N M++K I++ KV
Sbjct: 293 PDTFTLNIVIHCLVKDGQYG----EAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKV 348
Query: 147 AD---VLLLMEKENVKLTQFSYKILIDI---KGQSNDLTGMDQVVEAMKSEGIEPDSSTQ 200
D V +M E VK SY L+ +G D G + + +K G+ PD +
Sbjct: 349 EDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALG---IFKLLKQNGLRPDVVSY 405
Query: 201 AILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES 260
L Y G+ EKA KEM ++ + + + L+ Y G + + E
Sbjct: 406 TTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEK 465
Query: 261 N---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
+ P + + A G+ ++ + + + + KL+ Y + + Y + K
Sbjct: 466 DGIPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGK 525
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS-YMLI 376
+L M S + + ++ L+ + G+ A+S+ + P+ Y +
Sbjct: 526 ALELYAVMMASNVNPDAVTYNILISGLCKVGKY--AESLKFFEDMVDLRIPLTKEVYSSL 583
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNV 434
+ Y K+G + E F M++ G + + +++AY + + A+ + M + V
Sbjct: 584 ICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTV 643
Query: 435 FPNKALAAQVAQ 446
P+ + + + +
Sbjct: 644 QPDAIICSSLME 655
>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 426
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 128/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDIVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ ++K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWSKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNI 321
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDIVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 84/442 (19%), Positives = 178/442 (40%), Gaps = 67/442 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLC---- 58
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMK 120
DY+ + + ++L+ F ++V + N + ++A + + M+
Sbjct: 59 DYSKAISIFSRLK------------RSGFTPDIVAYNAMINVFGKAKLFREARSLISEMR 106
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVK--LTQFSYKILIDIKGQSND 177
G + + + LL +Y ++ KK + L + E +K L + I+ID+ GQ
Sbjct: 107 TAGVTPNTASYSTLLTMY--VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGM 164
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
D++ M+ GIEP+ + L + Y +A + + M+ N++++ T
Sbjct: 165 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 224
Query: 238 LLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ +Y E KA+ + + + P I W K+ K++ A +F+++ +
Sbjct: 225 MMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSG 284
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y ++ Y +++ K L+ ++ + D + + V G +E+A
Sbjct: 285 VDIDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPD----NIPRDIAIHILVGAGRIEEAT 340
Query: 355 SILLKAQQQNKFKP---------MFSSY-------------------------MLIMDQY 380
+ +A + K +FS Y LI++ Y
Sbjct: 341 WVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALILNAY 400
Query: 381 AKRGDIHSTEKIFHRMRQVGYV 402
K + ++ M++VG V
Sbjct: 401 GKLHEFDKANDVYMEMQEVGCV 422
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + I+ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A SI + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 176/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A +F M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F++MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFNKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALVLNAY 400
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFNKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 129/311 (41%), Gaps = 47/311 (15%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDI 171
VF +KD+G +T A N L+ + L V ++L + M++ + + ++Y L++
Sbjct: 170 VFFELKDRGLLMTESAANSLIKSFGNLGL--VEELLWVWRRMKENGIDPSLYTYNFLVNG 227
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
S + ++V E M I PD+ T I+ K Y G+ +KA ++ME N+K
Sbjct: 228 LVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPD 287
Query: 232 RWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA-------------------AIE 272
+ T Y L +A C S D C++ I
Sbjct: 288 KIT-------YMTLIQA---------CYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIG 331
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
K K EA AVF+ M++ + + YTAL+ Y+ + + + L ++M G
Sbjct: 332 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEP 391
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIHST 389
+ + LV + G ++ D + L +NK MF Y ++D K G I
Sbjct: 392 DAVTYSVLVNGLCKSGRLD--DGMELFDFCRNKGVAINAMF--YASLIDGLGKAGRIEDA 447
Query: 390 EKIFHRMRQVG 400
E +F M + G
Sbjct: 448 ENLFEEMSEKG 458
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 144/380 (37%), Gaps = 26/380 (6%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
V Y ++ ++KA E F M+ K L+ Y D + L
Sbjct: 254 VTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLE 313
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME+ +++ SY ++I + V E M +G + + L Y G
Sbjct: 314 MEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGS 373
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---A 269
E+A + + M+ + + T +L+ + G+ D ++ C + M +
Sbjct: 374 MEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 433
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ GK ++E+AE +F+ MS+ + Y A++ A H + + L +M E G
Sbjct: 434 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 493
Query: 330 C----HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
C + + D L K H ++ D ++ K P +S+ + G
Sbjct: 494 CDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG-----ITPTVASFRALAIGLCLCGK 548
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP------AYGIRDRMRADNVFPNKA 439
+ KI + +G + F+ ++ A+ A GI DR R P +
Sbjct: 549 VARACKILDDLAPMGIIPE-TAFEDMINTLCKAQRIKEACKLADGIVDRGRE---IPGR- 603
Query: 440 LAAQVAQVDAFRKTAVSELL 459
+ ++A RK S+L+
Sbjct: 604 --IRTVLINALRKAGNSDLV 621
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 149/378 (39%), Gaps = 39/378 (10%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTL 99
+AL L +W++ N + ++ Y L ++ K + ++ S V + T+
Sbjct: 381 EALALFDWMKKNGFIPYVN-TYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTM 439
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENV 158
LA C V RMK G + N L+ Y R + A + M
Sbjct: 440 LAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGF 499
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+Y L+ + + D T ++ MK+EG +P+ + ++L + + GG EA
Sbjct: 500 TPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEA 559
Query: 219 MLKEM-EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKL 277
+ KE+ EG + P W+ + I + K
Sbjct: 560 IEKEVYEGT-----------VFP---------------------SWVILRTLVISNF-KC 586
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
++E E F+ + K + ++L +YA + M K ++ + + G + +
Sbjct: 587 RRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITY 646
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
++++ ++ + E +A+ I LK + ++ KP SY +M+ + K+G I ++I M
Sbjct: 647 NSMMDMYAKSNESWEAEKI-LKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMI 705
Query: 398 QVGYVARFKQFQTLVQAY 415
G + TLV Y
Sbjct: 706 ADGVRPCVVTYHTLVGGY 723
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 139/349 (39%), Gaps = 8/349 (2%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK--KVADVLLLM 153
Y T+L ++A E+F +K +G T N +L +Y R+ + ++ +L M
Sbjct: 190 YTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEM 249
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
V+ F+ +I G+ + E +KS G P T L + + G
Sbjct: 250 RAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNY 309
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA---A 270
+A +LKEME K T L YA G ++ A+ S L
Sbjct: 310 MEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTI 369
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ A+G KV+EA A+F M K Y +L + + +++ +M+ SGC
Sbjct: 370 MTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGC 429
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ W+ ++ + + G +E + +L+ + + ++ ++ Y + G +
Sbjct: 430 TPNRVTWNTMLAVCGKRG-MEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAF 488
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
K++ M G+ + L+ T A I ++M+ + PN
Sbjct: 489 KMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPN 537
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 118/326 (36%), Gaps = 5/326 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLL 152
V Y LL N +A V M++ G + N+L Y R ++ A L
Sbjct: 294 VTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDT 353
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + F+Y ++ G + + + + MK G P +T ++ R
Sbjct: 354 MVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSR 413
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLDVCMA 269
ML EM +R T +L + + G V R+ K C D
Sbjct: 414 FNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNT 473
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A+G+ A ++ M+ Y ALL V + + + ++ +M G
Sbjct: 474 LISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEG 533
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+++ L++ H +GG ++I + + F L++ + R +
Sbjct: 534 FKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCR-RLEGI 592
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
E+ F + G+ F +++ Y
Sbjct: 593 ERAFQEVMARGHKPDLVIFNSMLSMY 618
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 114/279 (40%), Gaps = 10/279 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
Y LL+ + A+ + N+MK++GF + + LL + K A + +
Sbjct: 504 TTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHA---KGGNAAGIEAI 560
Query: 154 EKENVKLTQFSYKILIDIKGQSN----DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
EKE + T F +++ SN L G+++ + + + G +PD + Y
Sbjct: 561 EKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAK 620
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDV 266
G KA M ++ L T ++ +YA E +A+++ + K + P +
Sbjct: 621 NGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVS 680
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ + K ++EA+ + M + Y L+ YA +M S+ +++V M
Sbjct: 681 YNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMI 740
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ L + +V + + ++A L + + ++
Sbjct: 741 QRNLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAETDR 779
>gi|125579703|gb|EAZ20849.1| hypothetical protein OsJ_36487 [Oryza sativa Japonica Group]
Length = 607
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 133/327 (40%), Gaps = 5/327 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLM 153
VY L+A V V A F +M G F N L+ + +R + ++ M
Sbjct: 190 VYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQM 249
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E E ++ F+Y +L+D + + ++++ MK +G+ P +T L +
Sbjct: 250 EGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLER 309
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAIE 272
+KA ML + G H C +L ++ A + K + +L D I
Sbjct: 310 DKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIV 369
Query: 273 AWGKLNKVEEAE--AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
L +E ++ + K Y ++K + K SK + M G
Sbjct: 370 MSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGL 429
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
++++ ++ V+ G V+KA+ I+ K Q F P ++ ++ Y+K G++H+ +
Sbjct: 430 LSSVMSYNMVIDCFVKAGAVDKAEEIV-KEMQDKGFLPNLVTFNTLISGYSKLGNVHNAK 488
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYIN 417
+ + + G++ F +L+ N
Sbjct: 489 VVLKMLMEHGFMPDIITFTSLIDGLCN 515
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
CE + L VC A +E+WG+L A VF +M + + ST Y AL+ +
Sbjct: 149 CEVSEEL-VC-ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDT 206
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+QM GC +++LV G V++A L++ + +P +Y +++
Sbjct: 207 AYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVR-LVRQMEGEGIRPNVFTYTMLV 265
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
D + G + ++ +M++ G ++TLV
Sbjct: 266 DGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHG 302
>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 426
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 128/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKKSGFMPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E +LD+ C
Sbjct: 95 FREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCFLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ K+ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKKSGFMPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++ F
Sbjct: 89 FGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCFLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/358 (18%), Positives = 142/358 (39%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF M+
Sbjct: 82 YNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMR 141
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 142 EIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 201
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A + F+++ + ++
Sbjct: 262 SIWGKVGKLDRAAML--------------------------------FQKLRSSGVEIDQ 289
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 290 VLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIAIHILAGAGRIEEATWVFRQ 345
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + + +Y K G++ ++F +MR +GY ++ AY
Sbjct: 346 AIDAGEVKDITVFERMIYLFSKYKKYGNV---VEVFDKMRGLGYFPDSNVIALVLNAY 400
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 EIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIYLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 425
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + I+ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A SI + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A +F M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALVLNAY 400
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 169/375 (45%), Gaps = 44/375 (11%)
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G+ + FA N +L R + ++A+ L+L M ++++ +F++ LI G++N L
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 182 DQVVEAMKSEGIEPD-----------------SSTQAILAKHYVSGGRKEK--------- 215
++ M++ GI+PD S ++ +K SG +K
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 216 ---------AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD 265
A+ +L EM+ L + +L+ YAE K + +++ ++ LD
Sbjct: 140 YGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLD 199
Query: 266 V--CMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLV 322
V C I+ +GKL V +AE +F MSKT + + Y ++KVY + ++LS+ ++
Sbjct: 200 VTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVF 259
Query: 323 KQMA-ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
M + G + ++ ++ LH + EKA ++ K QQ+ +P +Y ++ Y
Sbjct: 260 YYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRG-IEPNAVTYSTLISIYG 318
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPNKA 439
K G +F +R+ G+ +Q+++ Y A A+ R + ++ ++ P
Sbjct: 319 KTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDT 378
Query: 440 LAAQVAQVDAFRKTA 454
+ +A+ + + A
Sbjct: 379 AISILAKAEKLEEAA 393
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 184/409 (44%), Gaps = 40/409 (9%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD- 62
PD+ I STL + A + D Y KA L L+ + I D
Sbjct: 93 PDLVIFSTLIELAGKVKD------------------YSKATSLFSKLKASG----IAPDK 130
Query: 63 --YASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLANCVA-GNNVKKAEEVFNR 118
Y S ++L K + ++A+ + ++ E+ + V T+L N A +A++VF
Sbjct: 131 VIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLE 190
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ--FSYKILIDIKGQSN 176
MK KG + CN ++ +Y +L+ + A+ L + + + Q +Y +I + ++
Sbjct: 191 MKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAE 250
Query: 177 DLTGMDQVVEAMKSE-GIEPDSST-QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
L+ V M+++ G+EP+ T IL H ++ + EKA ++++M+ ++ + T
Sbjct: 251 LLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLT-LQHEKAMRLVRKMQQRGIEPNAVT 309
Query: 235 CRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMS 291
L+ +Y + GK D+ A ++K L E +D + + I + + V A KR+
Sbjct: 310 YSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHA----KRLL 365
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K+ + + A + L + L + E+G + + ++++L V +
Sbjct: 366 EELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSK 425
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
A + + +++ F P + ++++ Y + + EK++ MR+ G
Sbjct: 426 NAIDV-FENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERG 473
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 107/269 (39%), Gaps = 34/269 (12%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
++EK + F+Y +++ ++ + +V M + + PD T + L Y
Sbjct: 15 MIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRAN 74
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
R E A L+EME +K P L + I
Sbjct: 75 RLEDAMGWLQEMEAGGIK--------------------------------PDLVIFSTLI 102
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
E GK+ +A ++F ++ + Y +++ +Y K + + L+ +M E+G
Sbjct: 103 ELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLM 162
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+++ L+ + E + +A + L+ + + + + M+I D Y K + E+
Sbjct: 163 PDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMI-DVYGKLEMVRDAEE 221
Query: 392 IFHRM-RQVGYVARFKQFQTLVQAYINAK 419
+F M + +G + T+++ Y A+
Sbjct: 222 LFWSMSKTLGIQQNVVTYNTMIKVYKEAE 250
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/276 (17%), Positives = 129/276 (46%), Gaps = 11/276 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+ Y T+L +KA + +M+ +G + + L+ +Y + K A L
Sbjct: 273 ITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKT 332
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ ++ ++ + Y+ +I + ++ + +++E +K I P + +ILAK +
Sbjct: 333 LREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAK---AEKL 389
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL---DVCMA 269
+E A+ + E +KE T + ++ L+ ++ +++ + +L + +
Sbjct: 390 EEAAKLYWRSHEAGEIKESV-TYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVV 448
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+G+L ++E+AE ++ M + L + + +LK+Y D + + + +D+ + G
Sbjct: 449 LLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEG 508
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQQ 363
G + +++++ ++ +A + +K++QQ
Sbjct: 509 LD-GDELYLTMIRIYERASKLNEASRLFSEMKSRQQ 543
>gi|410110117|gb|AFV61138.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hermannioides]
Length = 382
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 67
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 68 TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 127
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 188 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGV 246
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 247 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 288
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 144/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 43 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 102
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 103 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 162
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 222
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ + GK D+ A +++ S + VE + +F+ M
Sbjct: 223 SIWGKXGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 256
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 257 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 306
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 307 AIDAGEVKXITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGYFPDSDVIAIVLNAY 361
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 169/375 (45%), Gaps = 44/375 (11%)
Query: 123 GFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G+ + FA N +L R + ++A+ L+L M ++++ +F++ LI G++N L
Sbjct: 20 GYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDA 79
Query: 182 DQVVEAMKSEGIEPD-----------------SSTQAILAKHYVSGGRKEK--------- 215
++ M++ GI+PD S ++ +K SG +K
Sbjct: 80 MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINL 139
Query: 216 ---------AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD 265
A+ +L EM+ L + +L+ YAE K + +++ ++ LD
Sbjct: 140 YGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLD 199
Query: 266 V--CMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLV 322
V C I+ +GKL V +AE +F MSKT + + Y ++KVY + ++LS+ ++
Sbjct: 200 VTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVF 259
Query: 323 KQMA-ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
M + G + ++ ++ LH + EKA ++ K QQ+ +P +Y ++ Y
Sbjct: 260 YYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRG-IEPNAVTYSTLISIYG 318
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPNKA 439
K G +F +R+ G+ +Q+++ Y A A+ R + ++ ++ P
Sbjct: 319 KTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDT 378
Query: 440 LAAQVAQVDAFRKTA 454
+ +A+ + + A
Sbjct: 379 AISILAKAEKLEEAA 393
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 184/409 (44%), Gaps = 40/409 (9%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERD- 62
PD+ I STL + A + D Y KA L L+ + I D
Sbjct: 93 PDLVIFSTLIELAGKVKD------------------YSKATSLFSKLKASG----IAPDK 130
Query: 63 --YASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLANCVA-GNNVKKAEEVFNR 118
Y S ++L K + ++A+ + ++ E+ + V T+L N A +A++VF
Sbjct: 131 VIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLE 190
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQ--FSYKILIDIKGQSN 176
MK KG + CN ++ +Y +L+ + A+ L + + + Q +Y +I + ++
Sbjct: 191 MKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAE 250
Query: 177 DLTGMDQVVEAMKSE-GIEPDSST-QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
L+ V M+++ G+EP+ T IL H ++ + EKA ++++M+ ++ + T
Sbjct: 251 LLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLT-LQHEKAMRLVRKMQQRGIEPNAVT 309
Query: 235 CRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMS 291
L+ +Y + GK D+ A ++K L E +D + + I + + V A KR+
Sbjct: 310 YSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHA----KRLL 365
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ K+ + + A + L + L + E+G + + ++++L + +
Sbjct: 366 EELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSK 425
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
A + + +++ F P + ++++ Y + + EK++ MR+ G
Sbjct: 426 NAIDV-FENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERG 473
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 107/269 (39%), Gaps = 34/269 (12%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
++EK + F+Y +++ ++ + +V M + + PD T + L Y
Sbjct: 15 MIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRAN 74
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
R E A L+EME +K P L + I
Sbjct: 75 RLEDAMGWLQEMEAGGIK--------------------------------PDLVIFSTLI 102
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
E GK+ +A ++F ++ + Y +++ +Y K + + L+ +M E+G
Sbjct: 103 ELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLM 162
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+++ L+ + E + +A + L+ + + + + M+I D Y K + E+
Sbjct: 163 PDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMI-DVYGKLEMVRDAEE 221
Query: 392 IFHRM-RQVGYVARFKQFQTLVQAYINAK 419
+F M + +G + T+++ Y A+
Sbjct: 222 LFWSMSKTLGIQQNVVTYNTMIKVYKEAE 250
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/276 (17%), Positives = 129/276 (46%), Gaps = 11/276 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
+ Y T+L +KA + +M+ +G + + L+ +Y + K A L
Sbjct: 273 ITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKT 332
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ ++ ++ + Y+ +I + ++ + +++E +K I P + +ILAK +
Sbjct: 333 LREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAK---AEKL 389
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL---DVCMA 269
+E A+ + E +KE T + ++ L+ ++ +++ + +L + +
Sbjct: 390 EEAAKLYWRSHEAGEIKESV-TYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVV 448
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+G+L ++E+AE ++ M + L + + +LK+Y D + + + +D+ + G
Sbjct: 449 LLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEG 508
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQQ 363
G + +++++ ++ +A + +K++QQ
Sbjct: 509 LD-GDELYLTMIRIYERASKLNEASRLFSEMKSRQQ 543
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 113/267 (42%), Gaps = 6/267 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + ++ +Y +++ G + + ++ + M G+ PD T I+ + +G +
Sbjct: 214 MLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQ 273
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVC 267
KA + M+G N+ +T +++ ++G+ + K + +P +
Sbjct: 274 YTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTY 333
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ I ++ +VE +AVF M K + Y ALL YA H M ++ + K + +
Sbjct: 334 TSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQ 393
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+G +++ L+ + + EKA + ++N KP SY ++D Y G
Sbjct: 394 NGLRPDVVSYTTLLNAYGRSAQPEKAREV-FNEMRKNSCKPNKVSYNALIDAYGSAGMFK 452
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+ H M + G TL+ A
Sbjct: 453 EAISLLHEMEKDGIPPDVVSISTLLAA 479
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 106/243 (43%), Gaps = 5/243 (2%)
Query: 88 ESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
R +VV Y TLL +KA EVFN M+ + N L+ Y K
Sbjct: 394 NGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKE 453
Query: 147 ADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
A LL MEK+ + S L+ G+ T +D V+EA K GIE +
Sbjct: 454 AISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIG 513
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWL 264
Y+S G EKA + M N+ T +L+ +LGK + + ++ + + L
Sbjct: 514 SYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPL 573
Query: 265 --DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
+V + I ++ K +K+ EAE+ F M + YTA+++ Y DH + DL
Sbjct: 574 TKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLF 633
Query: 323 KQM 325
K+M
Sbjct: 634 KEM 636
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 78/394 (19%), Positives = 148/394 (37%), Gaps = 59/394 (14%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
+ +DL+ +R E +Q P+ V Y +++ + V+ + VF+ M +
Sbjct: 309 HGDAVDLLNSMR-----EKRVQCSPDV----VTYTSIIHSYYVCGQVENCKAVFDMMVAE 359
Query: 123 GFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G + N LL Y A + L+++ ++ SY L++ G+S
Sbjct: 360 GVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKA 419
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+V M+ +P+ + L Y S G ++A ++L EME D + + LL
Sbjct: 420 REVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLL-- 477
Query: 242 YAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
A G+ Q +I + E+ K +E + S LS
Sbjct: 478 -AACGRCRQTTKIDTVLEA--------------AKFRGIELNIVAYN--SGIGSYLSFGD 520
Query: 302 YTALLKVYADHKMLSKGKDLVK-QMAESG-CHIGPLA-----WDALVKLHVEGGEVEKAD 354
Y LK+YA + D V + SG C +G A ++ +V L +
Sbjct: 521 YEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIP-------- 572
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K ++SS ++ Y K+ + E F M+ G + ++QA
Sbjct: 573 ----------LTKEVYSS---LICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQA 619
Query: 415 YIN--AKTPAYGIRDRMRADNVFPNKALAAQVAQ 446
Y + + T + + M + + P+ + + + +
Sbjct: 620 YTDHGSWTSVWDLFKEMEGNAILPDAIICSSLME 653
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 139/341 (40%), Gaps = 8/341 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y+S ++ + K + + KAE + Q + R + Y L+ K++ VF M
Sbjct: 262 YSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMS 321
Query: 121 DKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
CN + L K K+ D+ M + K SY L+ + +
Sbjct: 322 SSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIA 381
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
GMD + M EG+ PD L Y G +K+ M ++M + T ++
Sbjct: 382 GMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVI 441
Query: 240 PLYAELGKADQ-VARIWKLCESNPWLDVCMAAIEAWGKLNK---VEEAEAVFKRMSKTWK 295
+ LG+ D + + + ++ D + + G+ N+ V+ E + +SK
Sbjct: 442 SAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIP 501
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
K +T+++ +++GKD+V + +G + +++LV + G +++A
Sbjct: 502 PPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVG 561
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
LL + + +P +Y ++D Y K G I +F M
Sbjct: 562 -LLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDM 601
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 143/360 (39%), Gaps = 23/360 (6%)
Query: 68 DLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKK-AEEVFNRMKDKGFP- 125
D A RGL + S + + P S A +V A E+F RM P
Sbjct: 139 DAPAPARGLNELLSALARAPPS--------------AACRDVPALAVELFKRMDRCACPE 184
Query: 126 --VTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
T + N L+ Y+R + + V + + + FSY LID + ++
Sbjct: 185 AAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAH 244
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+ M+ +GI P+ T + L +KAE +L++M G ++ + T L+ Y
Sbjct: 245 DLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGY 304
Query: 243 AELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
+ G + R++K S+ P + C + + A K +++EA +F M K
Sbjct: 305 STSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDV 364
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ALL YA ++ +L M G ++ L+ + G ++K+ ++ +
Sbjct: 365 ISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS-LLMFE 423
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ P ++ ++ + + G + + F+ M G + L+Q N +
Sbjct: 424 DMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRR 483
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 129/311 (41%), Gaps = 47/311 (15%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDI 171
VF +KD+G +T A N L+ + L V ++L + M++ + + ++Y L++
Sbjct: 172 VFFELKDRGLLMTESAANSLIKSFGNLGL--VEELLWVWRRMKENGIDPSLYTYNFLVNG 229
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
S + ++V E M I PD+ T I+ K Y G+ +KA ++ME N+K
Sbjct: 230 LVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPD 289
Query: 232 RWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA-------------------AIE 272
+ T Y L +A C S D C++ I
Sbjct: 290 KIT-------YMTLIQA---------CYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIG 333
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
K K EA AVF+ M++ + + YTAL+ Y+ + + + L ++M G
Sbjct: 334 GLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEP 393
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIHST 389
+ + LV + G ++ D + L +NK MF Y ++D K G I
Sbjct: 394 DAVTYSVLVNGLCKSGRLD--DGMELFDFCRNKGVAINAMF--YASLIDGLGKAGRIEDA 449
Query: 390 EKIFHRMRQVG 400
E +F M + G
Sbjct: 450 ENLFEEMSEKG 460
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 144/380 (37%), Gaps = 26/380 (6%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
V Y ++ ++KA E F M+ K L+ Y D + L
Sbjct: 256 VTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLE 315
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME+ +++ SY ++I + V E M +G + + L Y G
Sbjct: 316 MEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGS 375
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---A 269
E+A + + M+ + + T +L+ + G+ D ++ C + M +
Sbjct: 376 MEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 435
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ GK ++E+AE +F+ MS+ + Y A++ A H + + L +M E G
Sbjct: 436 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 495
Query: 330 C----HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
C + + D L K H ++ D ++ K P +S+ + G
Sbjct: 496 CDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG-----ITPTVASFRALAIGLCLCGK 550
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP------AYGIRDRMRADNVFPNKA 439
+ KI + +G + F+ ++ A+ A GI DR R P +
Sbjct: 551 VARACKILDDLAPMGIIPE-TAFEDMINTLCKAQRIKEACKLADGIVDRGRE---IPGR- 605
Query: 440 LAAQVAQVDAFRKTAVSELL 459
+ ++A RK S+L+
Sbjct: 606 --IRTVLINALRKAGNSDLV 623
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 153/387 (39%), Gaps = 35/387 (9%)
Query: 70 IAKLRGLQKAESYIQKIPESFRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTS 128
+A+ R L ES+ ++P R Y TL+ A C+AG+ + ++ + + GF S
Sbjct: 51 LARHRMLADMESFASRMPA--RNLRTYTTLINAYCLAGD-LPASKRHLSSLLRAGFAPDS 107
Query: 129 FACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
A ++ Y R + +LM T F+Y L+ + L G V EA
Sbjct: 108 HAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALL------HGLCGAGMVREA 161
Query: 188 M------KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
M +++G PD A + GR +AE +L + + + + L+
Sbjct: 162 MSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221
Query: 242 YAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
Y +G + +++ + N P + I + K K++ A +F RM +
Sbjct: 222 YCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN 281
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW------DALVKLHVEGGEVEK 352
YTAL++ L L++ M SG + P W DAL K H GE +
Sbjct: 282 VVTYTALIQGQCSDGQLDCAYRLLQSMENSG--LVPNEWTCSVLIDALCK-HERVGEAQ- 337
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+LL + Q K Y ++D K G + +++ + G+V + +L+
Sbjct: 338 ---LLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394
Query: 413 QAYINAK--TPAYGIRDRMRADNVFPN 437
K + A + D M V P+
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPS 421
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 133/352 (37%), Gaps = 11/352 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLM 153
VY T++ ++AE + + +GF N L+ Y + D + DV M
Sbjct: 179 VYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM 238
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ +Y LI +S L + M G+ P+ T L + S G+
Sbjct: 239 DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQL 298
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLL---LPLYAELGKADQV--ARIWKLCESNPWLDVCM 268
+ A +L+ ME L + WTC +L L + +G+A + + I K + N V
Sbjct: 299 DCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEI--VYT 356
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ I+ K + A+ + + + Y++L+ K LS+ ++ M E
Sbjct: 357 SLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEK 416
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G P+ + ++ V + + IL K KP +Y + + Y G +
Sbjct: 417 GVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAG-IKPDVFTYTIFVRSYCHEGRMED 475
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYIN--AKTPAYGIRDRMRADNVFPNK 438
E + M G + L+ Y N + A+ M A+ PN+
Sbjct: 476 AEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNE 527
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 135/330 (40%), Gaps = 33/330 (10%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
E+VY +L+ A+ + + +GF + + L+ R +K++++ +L+
Sbjct: 352 EIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCR--QKELSEAMLV 409
Query: 153 ME---KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
++ ++ V+ + +Y I+ID + G ++++ M + GI+PD T I + Y
Sbjct: 410 LDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCH 469
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
GR E AE M+ M + + T L+ YA LG Q +K +N C
Sbjct: 470 EGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANG----CKP 525
Query: 270 AIEAWGKLNKV----EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
E++ L ++ E + + WK K+ LL+ ++ S+ D+
Sbjct: 526 NEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSE-IDIYNCF 584
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSI-------------------LLKAQQQNKF 366
S C + L ++ + ++ + ++ + + + ++ +
Sbjct: 585 LTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGY 644
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
P SY I+ + G I + +++F M
Sbjct: 645 IPQLESYRHIISSLCEEGSIQTAKQVFGDM 674
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 151/354 (42%), Gaps = 7/354 (1%)
Query: 67 LDLIAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGF 124
++++ K L+KA +I + F+ VV Y T++ + N++ A + + M+ KG
Sbjct: 256 VNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGI 315
Query: 125 PVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
S+ L+ + K ++ + + M + + +Y LID DL
Sbjct: 316 EPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS 375
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ M +GI P ST +L GR +A+ M+KEM + T +L+ Y+
Sbjct: 376 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 435
Query: 244 ELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
G A + + S P + I + N+++EA+ +F+++
Sbjct: 436 RCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 495
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+ A++ + + + + L+K+M + ++ L++ G+VE+A +LL
Sbjct: 496 MFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA-RMLLDE 554
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ KP SY ++ Y +RGDI ++ M +G+ + L++
Sbjct: 555 MKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 608
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/428 (19%), Positives = 154/428 (35%), Gaps = 85/428 (19%)
Query: 89 SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK----- 143
S + +V+ L+ C +A + F MK+KG CN +L L+ +L++
Sbjct: 175 SVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 234
Query: 144 -------------------------------KKVADVLLLMEKENVKLTQFSYKILIDIK 172
KK + + ME K SY +I
Sbjct: 235 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 294
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
++ G ++++AM+ +GIEPDS T L GR E+A + +M L +
Sbjct: 295 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 354
Query: 233 WTCRLLLPLYAELGKA-------DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
T L+ Y G D++ + + P + + A ++ EA+
Sbjct: 355 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM----PSVSTYNLLVHALFMEGRMGEADD 410
Query: 286 VFKRMSK--------TW-------------------------KKLSTKH--YTALLKVYA 310
+ K M K T+ K + H YT+L+ V +
Sbjct: 411 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 470
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
+ + DL +++ + G + ++A+V H G VE+A +LLK + P
Sbjct: 471 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERA-FMLLKEMDRKSVPPDE 529
Query: 371 SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDR 428
++ +M + G + + M++ G + TL+ Y A+ +RD
Sbjct: 530 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 589
Query: 429 MRADNVFP 436
M + P
Sbjct: 590 MLSIGFNP 597
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 237 LLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL+ + EL +AD+ + + + + P ++ C + + KLN++E A ++ M +
Sbjct: 184 LLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRL 243
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ + ++ V L K ++ + M G ++++ ++ + G +E A
Sbjct: 244 RISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 303
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
IL A + +P +Y ++ K G + +F +M ++G V + TL+
Sbjct: 304 RRIL-DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 362
Query: 414 AYINAKT--PAYGIRDRMRADNVFPN 437
Y N A+ RD M + P+
Sbjct: 363 GYCNKGDLERAFSYRDEMVKKGIMPS 388
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 6/224 (2%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILI 169
+A+++ M+ KG + N L+ Y R + KK D+ M + ++ T +Y LI
Sbjct: 407 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLI 466
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
+ + N + D + E + +G+ PD + + + G E+A +LKEM+ ++
Sbjct: 467 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVP 526
Query: 230 EHRWTCRLLLPLYAELGKADQVARI----WKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
T L+ GK ++ AR+ K P I +G+ +++A
Sbjct: 527 PDEVTFNTLMQGRCREGKVEE-ARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFR 585
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
V M + Y AL+K ++ ++L+K+M G
Sbjct: 586 VRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKG 629
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/360 (19%), Positives = 149/360 (41%), Gaps = 9/360 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLL-ANCVAGNNVKKAEEVFNRM 119
+ C+ ++ + + +A +++ + G V Y L+ A C AG ++ A+E+F +M
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ-LENAKELFVKM 323
Query: 120 KDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
K G LL + D + ME + ++ IL+D+ ++ D
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+ M+ +GI P+ T L + GR E A +L ME ++ +T
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITF 443
Query: 239 LPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ + E GKA + K P + C A++ + ++ ++ EA+ +F + +
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ Y ++K Y+ + + +L+ +M +GC + ++L+ + G V++A
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + + K P +Y ++ K G + ++F M F TL+ +
Sbjct: 564 MFDRMKDM-KLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 6/262 (2%)
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
M V E M+ + I D T + K G + +L +M + ++ L+
Sbjct: 141 MAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIH 200
Query: 241 LYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
L + G + +++ S P L A + A GK E + K M +
Sbjct: 201 LLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRP 260
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ +T ++V + + ++ ++M + GC + + L+ G++E A +
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
+K + N KP Y+ ++D++ GD+ + ++ + +M GY+ F LV
Sbjct: 321 VK-MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Query: 418 AK--TPAYGIRDRMRADNVFPN 437
A+ A+ D MR + PN
Sbjct: 380 ARDFDEAFATFDVMRKQGILPN 401
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 121/290 (41%), Gaps = 8/290 (2%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
F++ +L+ + G+S +T + ++ + M S +PD+ T I+ +KA +
Sbjct: 824 FTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYD 883
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE---SNPWLDVCMAAIEAWGKLNK 279
+ + + T L+ A++G+ ++ R+++ P + I +GK+
Sbjct: 884 LVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD 943
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
E A +FKRM + K YT L+ + + ++ +G +A++
Sbjct: 944 TETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNR 1003
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + +E+A + L + +N+ P +Y +M G + ++++ ++
Sbjct: 1004 IINGLGKSQRMEEA--LALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061
Query: 399 VGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQVAQ 446
G + L++ Y ++ P AY + M D PN AQ+
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 118/319 (36%), Gaps = 49/319 (15%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+++ VL M K L +SY LI + QS +V M SEG++P T + L
Sbjct: 174 RQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSAL 233
Query: 204 AKHYVSGGRKEKAE---AMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE- 259
V+ G+K +E +LKEME L+ + +T + + + GK D+ I++ +
Sbjct: 234 M---VALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290
Query: 260 --SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
P L I+A ++E A+ +F +M K Y LL + D L
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
K+ QM G + P ++ +++
Sbjct: 351 FKEFWSQMEADG------------------------------------YMPDVVTFTILV 374
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVF 435
D K D F MR+ G + + TL+ + A A + D M + V
Sbjct: 375 DVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQ 434
Query: 436 PNKALAAQVAQVDAFRKTA 454
P + +D F K+
Sbjct: 435 PTA--YTYITFIDYFGKSG 451
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 146/368 (39%), Gaps = 14/368 (3%)
Query: 59 IERDYASCLDLIAKLR---GLQKAESYIQKIPESFRGEVV----YRTLLANCVAGNNVKK 111
I RD + L + L GL++ + + K+ ++ G V+ Y L+ + +
Sbjct: 153 IRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKA--GFVLNAYSYNGLIHLLIQSGFCGE 210
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
A EV+ RM +G + + L++ L K+ D + V +L ME ++ +++ I I
Sbjct: 211 ALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIR 270
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ G++ + ++ M EG PD T +L + G+ E A+ + +M+ + K
Sbjct: 271 VLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKP 330
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAI--EAWGKLNKVEEAEAVF 287
+ LL + + G D W E++ ++ DV I + K +EA A F
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
M K + Y L+ + L+ M G + + +
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKS 450
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
GE KA K + + P + + A+ G + + +F+ +R+ G
Sbjct: 451 GETGKAVETFEKMKAKG-IVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVT 509
Query: 408 FQTLVQAY 415
+ +++ Y
Sbjct: 510 YNMMMKCY 517
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 102/254 (40%), Gaps = 6/254 (2%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
K GI P ++ L + EKA + K+M+ +T +LL ++ + GK
Sbjct: 780 KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 249 DQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
++ ++K S P I + K N +++A F + + + + + Y L
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ A L + L ++M++ GC ++ L+ + + G+ E A L K
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ-LFKRMVNEG 958
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAY 423
+P SY +++D G + F+ ++ G F + ++ ++ A
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 424 GIRDRMRADNVFPN 437
+ + MR + P+
Sbjct: 1019 ALYNEMRNRGIVPD 1032
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 189/455 (41%), Gaps = 60/455 (13%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV-----VY 96
KALQ W + E+ Y S L+++ + R L A +++ I + RG V +
Sbjct: 94 KALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 97 RTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDK---KKVADVLLL 152
+L+ N +++ +VF MK G + N LL IL KR KKV D +L
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212
Query: 153 ----------------------MEKENVK----LTQF-------SYKILIDIKGQSNDLT 179
M + + L++F +Y L+D ++ +T
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272
Query: 180 GMDQVVEAM--KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
VV+ M KS + P+ T L + Y + EKA A+ +EM LK + T
Sbjct: 273 VAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNT 332
Query: 238 LLPLYAELGKADQVARIWKLCESNPWL--DVCM--AAIEAWGKLNKVEEAEAVFKRMSKT 293
L+ E K +++ I + + D C + +++A VF+RMS+
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE-----SGCHIGPL--AWDALVKLHVE 346
+ + Y+AL++ K +DL+ ++ E SG PL A++ + K E
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
G+ +KA+ + ++ P SY ++ + K G S ++ M + ++ F+
Sbjct: 453 TGKTKKAEKAFRQLMRRGTQDP--PSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFE 510
Query: 407 QFQTLVQAYINAKTPAYGIR--DRMRADNVFPNKA 439
+++L+ ++ P ++ ++M + PN +
Sbjct: 511 TYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSS 545
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 138/313 (44%), Gaps = 14/313 (4%)
Query: 135 LILYKRLDKKKVADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
LI +K+L K + +L L + ++ + +L+ G+ D + ++V++ M +G
Sbjct: 111 LIRFKQLKKWNIVSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKG 170
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
+P +Q L + Y G + KAEA+ + M+ + T +++L E K +
Sbjct: 171 YQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTSGPQPSPVTYQIILKSLVEGDKYKEAE 230
Query: 253 RIW------KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
I+ K P + I + K +A +F +MS+ LST + +L+
Sbjct: 231 AIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLM 290
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
++K +S ++ QM +G +++ L+K + + E+A ++ +
Sbjct: 291 SFETEYKEVS---NIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEALAVF-EEMLDAGV 346
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYG 424
+P SY +++D +A G + +F MR+ + T+V AY+NA A
Sbjct: 347 RPTRKSYNILLDAFAISGLVEEANTVFRAMRRHRVEPDLCSYTTMVLAYVNASEMNGAEK 406
Query: 425 IRDRMRADNVFPN 437
R++ D + PN
Sbjct: 407 FFRRIKEDGLKPN 419
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 163/418 (38%), Gaps = 80/418 (19%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLANC 103
++ EWL T DF E D+ + KL +AE ++ + + ++ V+ +T L
Sbjct: 125 EILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYQPSVISQTGLMEA 184
Query: 104 VA-GNNVKKAEEVFNRMKDKG---FPV------------------------------TSF 129
G +KAE VF RM+ G PV TSF
Sbjct: 185 YGRGKQYRKAEAVFRRMQTSGPQPSPVTYQIILKSLVEGDKYKEAEAIFEDLLNEKRTSF 244
Query: 130 ACNQ-----LLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
+Q ++ +YK+ D + + M + + L+ ++ L+ + + +++
Sbjct: 245 KPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSFETEYKEVS---N 301
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ G++PD + ++L K Y R+E+A A+ +EM ++ R + +LL +A
Sbjct: 302 IYDQMQRAGLKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILLDAFA 361
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
G VEEA VF+ M + + YT
Sbjct: 362 ISG--------------------------------LVEEANTVFRAMRRHRVEPDLCSYT 389
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
++ Y + ++ + +++ E G + + L+K + + +EK + + + Q
Sbjct: 390 TMVLAYVNASEMNGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKVMRVYERMRIQ 449
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+P + Y IMD + D + F M GY K L+ AKTP
Sbjct: 450 G-VEPNQTIYTTIMDAQGRNSDFGNAVIWFKEMEARGYPPDQKAKNILLSL---AKTP 503
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/460 (20%), Positives = 190/460 (41%), Gaps = 28/460 (6%)
Query: 3 APDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQ-LSEWLETNKKLD---- 57
P++ +++ L +G DL +AE+ + +L R G L + + +LD
Sbjct: 362 VPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAIS 421
Query: 58 FIER-----------DYASCLDLIAKLRGLQKAES-YIQKIPESFRGE-VVYRTLLANCV 104
+ +R Y S ++ K L AES +I+ + + +L++
Sbjct: 422 YFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC 481
Query: 105 AGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQ 162
V+KA +++N+M D G + L+ +K A L L+E++ +K T+
Sbjct: 482 KDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK-IKPTE 540
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+Y +LI+ + + +++E M +G+ PD+ T L S GR KA+ + +
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDD 600
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVE 281
+ N+K + LL Y + G+ + ++ ++ + +D+ A+ G L + +
Sbjct: 601 LHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPD 660
Query: 282 EAEA--VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
+ K M + YT+++ Y+ K + M C + + A
Sbjct: 661 RKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTA 720
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
L+ + GE+++A +L K Q P +Y +D K G++ + H M +
Sbjct: 721 LMNGLCKAGEMDRA-GLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK- 778
Query: 400 GYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
G +A +++ + + A + M + +FP+
Sbjct: 779 GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPD 818
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 11/328 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y L+ G+ V +A EV + KG L++ + RL + + L+
Sbjct: 261 VTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLM-- 318
Query: 154 EKENVKL----TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
E V+L T+ + L+D + + ++V + G P+ L
Sbjct: 319 -DEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCK 377
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
GG +KAE + M NL+ + T +L+ + G+ D + + + A
Sbjct: 378 GGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYA 437
Query: 270 ---AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
I K + AE++F M+ + + +T+L+ Y + K L +M
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMI 497
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
++G + AL+ ++ +A S L + K KP +Y ++++ Y + G I
Sbjct: 498 DNGITPNVYTFTALISGLCSTNKMAEA-SELFDELVERKIKPTEVTYNVLIEGYCRDGKI 556
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ M Q G V ++ L+
Sbjct: 557 DKAFELLEDMHQKGLVPDTYTYRPLISG 584
>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
fucata]
Length = 382
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMK 67
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 68 AAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 127
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 188 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGI 246
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 247 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 288
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/358 (18%), Positives = 145/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 43 YNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 102
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 103 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 162
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 222
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + +E + +F+ M
Sbjct: 223 SIWGKVGKLDRAAMLFQKLRS-----------------SGIEIDQILFQTM--------- 256
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 257 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 306
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 307 AIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGYFPDSDVIAIVLNAY 361
>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
aristata]
Length = 382
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMK 67
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 68 AAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 127
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 188 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGI 246
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 247 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 288
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/358 (18%), Positives = 145/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 43 YNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMR 102
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 103 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 162
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 222
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + +E + +F+ M
Sbjct: 223 SIWGKVGKLDRAAMLFQKLRS-----------------SGIEIDQILFQTM--------- 256
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 257 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 306
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 307 AIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGYFPDSDVIAIVLNAY 361
>gi|356528509|ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 580
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 153/356 (42%), Gaps = 20/356 (5%)
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
++ CL++ R +QK YI +Y L++ + A +F+ M++
Sbjct: 151 NWLQCLEV---FRWMQKQRWYIAD-------NGIYSKLISVMGKKGQTRMAMWLFSEMRN 200
Query: 122 KGFPVTSFACNQLLILYKRL-DK-KKVADVLLLMEK----ENVKLTQFSYKILIDIKGQS 175
G + N L+ + R DK K +A + +K E K +Y IL+ Q+
Sbjct: 201 TGCRPDTSVYNALITAHLRSRDKIKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQA 260
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
++ ++ + + + + PD T + Y G + EA+L M+ + K T
Sbjct: 261 RNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITF 320
Query: 236 RLLLPLYAE---LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
LL+ Y + GK +QV + + P L + I +GK ++AE VFK+M+
Sbjct: 321 NLLIDSYGKKQAFGKMEQVFKSLLHSKERPSLPTFNSMILNYGKARLKDKAEDVFKKMTD 380
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
LS + +++ +Y +S+ L ++ ES HI +A++ ++ G ++
Sbjct: 381 MGYTLSFVTHESMIYMYGFCDCVSRAAQLFDELVESKVHIKVSTLNAMLDVYCLNGLPQE 440
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
ADS+ +A K P S++ L+ Y K +K+ M + G + + F
Sbjct: 441 ADSLFERAISI-KIHPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIIPNKRFF 495
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 103/259 (39%), Gaps = 44/259 (16%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST-QAILAKHYVSGGRKE---KAEAML 220
Y LI + G+ + M++ G PD+S A++ H S + + KA
Sbjct: 175 YSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLRSRDKIKALAKAIGYF 234
Query: 221 KEMEG-DNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCES--NPWLDVCMAAIEAWGK 276
++M+G + K + T +LL +A+ +QV ++K L ES +P + ++A+GK
Sbjct: 235 QKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGK 294
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+ E EAV RM K + L+ Y +
Sbjct: 295 NGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQAF--------------------- 333
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
G++E+ LL ++++ P F+S +L Y K E +F +M
Sbjct: 334 -----------GKMEQVFKSLLHSKERPSL-PTFNSMIL---NYGKARLKDKAEDVFKKM 378
Query: 397 RQVGYVARFKQFQTLVQAY 415
+GY F ++++ Y
Sbjct: 379 TDMGYTLSFVTHESMIYMY 397
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 131/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFSPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFLEALTVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ ++K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWSKIGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G +QT++ AY A A+ R + R DN+ + A+
Sbjct: 274 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 327
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 174/421 (41%), Gaps = 67/421 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A +A + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALAW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + V Y TLL
Sbjct: 63 AISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM----------- 268
+EM+ ++ + T ++ +++++GK D+ A ++ KL S +D +
Sbjct: 243 QEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERA 302
Query: 269 ----------------------AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
AI ++EEA VF++ + + ++
Sbjct: 303 GLVAHAKRLLHELKRPDNIPRDTAIHILAGSGRIEEATWVFRQAIDAGEVKDITVFERMI 362
Query: 307 KVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
+++ +K S ++ +M G ++ L +A KLH E +KA+++ ++ Q
Sbjct: 363 HLFSKYKKYSNVVEVFDKMRGLGYFPDSNVTALVLNAYGKLH----EFDKANNVYIEMQD 418
Query: 363 Q 363
+
Sbjct: 419 E 419
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A A L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFSPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G +++ L+ ++VE + +A ++ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTMYVENKKFLEALTVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 123/277 (44%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 42 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 101
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A A++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 102 FREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNI 161
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 162 MIDVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 221
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 222 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 280
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A A+ R
Sbjct: 281 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 317
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 33/236 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ + PD T + L H+ G + A + L++ME D + L LY+
Sbjct: 3 LFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYS 55
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
L IE KL +A ++F R+ ++ Y
Sbjct: 56 NL-------------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYN 90
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
A++ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 91 AMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREI 150
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 151 KCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAE 205
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 179/425 (42%), Gaps = 33/425 (7%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 13 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 69
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A + I ++ + Y TLL
Sbjct: 70 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLT 129
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF+ M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 130 MYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIET 189
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 190 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 249
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKL 277
+EM+ ++ + T ++ ++ ++GK D+ A ++ KL S +D + I A+ +
Sbjct: 250 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERA 309
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
V A KR+ K + + A + + + +Q ++G +
Sbjct: 310 GLVAHA----KRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVF 365
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ ++ L + + A + K + F P + L+++ Y K ++ ++ M+
Sbjct: 366 ERMIHLFSKYKKYANAVEVFDKMRGLGYF-PDSNVIALVLNAYGKLHELDKANDVYMEMQ 424
Query: 398 QVGYV 402
+VG V
Sbjct: 425 EVGCV 429
>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 426
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYXKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + I+ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSXGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYXKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A SI + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 174/437 (39%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYXK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A +F M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSXGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALVLNAY 400
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 135/330 (40%), Gaps = 17/330 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
V Y L+ A ++F+ M+ G + NQ++ L+ D +K V
Sbjct: 373 VTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNK 432
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K+ T +Y LI + L + + MK EPD T L + GG+
Sbjct: 433 MLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGK 492
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
+ A + EM + ++WT ++ Y + GK D +++ E N C A+IE
Sbjct: 493 LDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG----CSASIE 548
Query: 273 AWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ + N+ EAE +M++ + +T YT+L+ + + + +M
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ C + +L+ + G+V+ A+ + +N +P +Y ++ + G
Sbjct: 609 EKKNCLPNAHTYTSLIYGLCQEGKVDAAERL-----TENGCEPTIDTYSTLVSGLCREGR 663
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ ++ M++ G + + +L+ A+
Sbjct: 664 SNEASQLVENMKEKGLSPSMEIYCSLLVAH 693
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 128/312 (41%), Gaps = 15/312 (4%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLME 154
+ TLL + V A+ V+ ++ G + N ++ IL K K KV + +L+
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCK---KGKVQEAVLVFN 221
Query: 155 K---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
K ++ F+Y LI ++ L +V + M +G P+S T + L + G
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDV 266
R +A ML+EM ++ +T + + ++G+ D + K C +P +
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGC--SPSVQT 339
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A I + K+E A ++ +M K +T Y AL+ + M
Sbjct: 340 YTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWME 399
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
G ++ ++K ++EKA + K + P +Y ++ + KRG +
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGP-SPTVVTYNTLIVENLKRGYL 458
Query: 387 HSTEKIFHRMRQ 398
++ + + M++
Sbjct: 459 NNATRFLYMMKE 470
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 114/311 (36%), Gaps = 48/311 (15%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLM 153
Y +++ GN +AE+ +M ++G + L+ L K + M
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
EK+N +Y LI Q + +++ E G EP T + L GR
Sbjct: 609 EKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTIDTYSTLVSGLCREGRS 664
Query: 214 EKAEAMLKEMEGDNLKEH-RWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+A +++ M+ L C LL+ L K D I+ L P L +
Sbjct: 665 NEASQLVENMKEKGLSPSMEIYCSLLVAHCKSL-KVDCALEIFNLMAVKGFQPHLFIYKV 723
Query: 270 AIEAWGKLNKVEEAEAVFKR-MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I A +++ EEA +F+ + K W DL+
Sbjct: 724 LICALCGVSRAEEALNIFQSLLKKQWN-----------------------SDLI------ 754
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
W LV ++ G+ + L + +N P +Y+++ + +K G
Sbjct: 755 -------VWTVLVDGLLQEGDSDLCMKFLYLMESRN-CTPSLHTYIILARELSKVGKSIG 806
Query: 389 TEKIFHRMRQV 399
T++I +R+R+V
Sbjct: 807 TDQIGNRLREV 817
>gi|255661168|gb|ACU25753.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 352
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTTSYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTTSYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF M+
Sbjct: 82 YNAMINVFGKAKLFREARSLISEMRTAGVTPNTTSYSTLLTMYVENKKFLEALSVFAEMR 141
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 201
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 240 PLYAELGKADQVARIWKLCESN 261
++ ++GK D+ A +++ S+
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSS 283
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + + + LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKR 289
F++
Sbjct: 343 FRQ 345
>gi|357487221|ref|XP_003613898.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515233|gb|AES96856.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 807
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 149/353 (42%), Gaps = 13/353 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLME 154
Y TL+ ++ E+F +M +G T+ N ++ LY + ++V+ +L ME
Sbjct: 274 YNTLIDIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLLQRME 333
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ +Y ILI + + N++ + + MK +EPD + L Y + +
Sbjct: 334 ELRCPPDTRTYNILISVLVKHNNIKLAAKYLMKMKEAFLEPDLVSYRTLLYAYSTRKMVQ 393
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW--KLCESNPWLDVCMAA-I 271
+AE +++EM+ LK +T L +Y E +Q + +W + + C A I
Sbjct: 394 EAEELVREMDERGLKIDEFTQAALTRMYVESNMLEQ-SWLWFRRFHVAGNITSSCYCANI 452
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+A+G+ EAE VF K KKLS + ++K Y K K L M + G
Sbjct: 453 DAYGEQGYTLEAEKVF-MCCKQKKKLSVLVFNVMIKAYGIGKCYDKACQLFDSMEKFGIV 511
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
++ +L+ + + A L K Q+ Y ++ + K + E+
Sbjct: 512 ANECSYSSLIHILASADKPHIAKPYLNKMQEAGLVSDCI-LYCAVISSFVKLSQLDMAEE 570
Query: 392 IFHRMRQVGYVARFKQ--FQTLVQAY--INAKTPAYGIRDRMRADNVFPNKAL 440
++ M +G+ + + L+ A+ + A G DRMR N+A+
Sbjct: 571 LYIEM--IGHTVKPDAIIYSVLINAFADVGNVIKATGYLDRMRNAGFVGNQAI 621
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 123/316 (38%), Gaps = 53/316 (16%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILI 169
+KAEE F R +G P+ + I + +D + V + + NV L +Y LI
Sbjct: 229 QKAEEFF-RKWSRGEPLV------IAIDHNTVDVRHVCNEV---SHVNVCLNSHTYNTLI 278
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
DI G++ + + ++ M +G+ P + T + Y + GR + +L+ ME
Sbjct: 279 DIYGKAGQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLLQRMEELRCP 338
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
T +L+ + K N ++ A +
Sbjct: 339 PDTRTYNILISVLV--------------------------------KHNNIKLAAKYLMK 366
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
M + + + Y LL Y+ KM+ + ++LV++M E G I AL +++VE
Sbjct: 367 MKEAFLEPDLVSYRTLLYAYSTRKMVQEAEELVREMDERGLKIDEFTQAALTRMYVESNM 426
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+E++ + S Y +D Y ++G EK+F +Q K+
Sbjct: 427 LEQSWLWFRRFHVAGNITS--SCYCANIDAYGEQGYTLEAEKVFMCCKQK------KKLS 478
Query: 410 TLVQAYINAKTPAYGI 425
LV N AYGI
Sbjct: 479 VLV---FNVMIKAYGI 491
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 21/243 (8%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y LID+ +S ++ M S+G+EPD T ++ + Y +KAE +
Sbjct: 179 TYGTLIDVYSKSGFKEEALGWLQRMLSQGMEPDEVTMGVVVQLYKRAREFQKAEEFFR-- 236
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA------IEAWGKL 277
+W+ L + + D + +C ++VC+ + I+ +GK
Sbjct: 237 --------KWSRGEPLVIAIDHNTVD----VRHVCNEVSHVNVCLNSHTYNTLIDIYGKA 284
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+++ +F +M K +T + ++ +Y +H + + L+++M E C +
Sbjct: 285 GQIQAVYEIFAKMIKQGVAPTTVTFNTMIHLYGNHGRIREVSLLLQRMEELRCPPDTRTY 344
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ L+ + V+ ++ A L+K ++ +P SY ++ Y+ R + E++ M
Sbjct: 345 NILISVLVKHNNIKLAAKYLMKMKEA-FLEPDLVSYRTLLYAYSTRKMVQEAEELVREMD 403
Query: 398 QVG 400
+ G
Sbjct: 404 ERG 406
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 152/346 (43%), Gaps = 13/346 (3%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + ++ K ++ A Y+ K+ E+F V YRTLL V++AEE+
Sbjct: 342 RTYNILISVLVKHNNIKLAAKYLMKMKEAFLEPDLVSYRTLLYAYSTRKMVQEAEELVRE 401
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENV--KLTQFSYKILIDIKGQSN 176
M ++G + F L +Y ++ + L + +V +T Y ID G+
Sbjct: 402 MDERGLKIDEFTQAALTRMY--VESNMLEQSWLWFRRFHVAGNITSSCYCANIDAYGEQG 459
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
++V K + + ++ K Y G +KA + ME + + +
Sbjct: 460 YTLEAEKVFMCCKQKK-KLSVLVFNVMIKAYGIGKCYDKACQLFDSMEKFGIVANECSYS 518
Query: 237 LLLPLYAELGKADQVARIW--KLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSK 292
L+ + A K +A+ + K+ E+ D + A I ++ KL++++ AE ++ M
Sbjct: 519 SLIHILASADKP-HIAKPYLNKMQEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEMIG 577
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
K Y+ L+ +AD + K + +M +G +++L+KL+ + G +++
Sbjct: 578 HTVKPDAIIYSVLINAFADVGNVIKATGYLDRMRNAGFVGNQAIYNSLMKLYTKIGYLKE 637
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
A Q ++ +FSS +I D Y +R + ++IF +++
Sbjct: 638 AQQTYTLLQSLDQAPSVFSSNCMI-DLYTERLMVEQAKEIFESLKK 682
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 105/249 (42%), Gaps = 13/249 (5%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
E Y +L+ + + A+ N+M++ G ++ + +L + +A+ L +
Sbjct: 514 ECSYSSLIHILASADKPHIAKPYLNKMQEAGLVSDCILYCAVISSFVKLSQLDMAEELYI 573
Query: 153 -MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M VK Y +LI+ ++ ++ M++ G + + L K Y G
Sbjct: 574 EMIGHTVKPDAIIYSVLINAFADVGNVIKATGYLDRMRNAGFVGNQAIYNSLMKLYTKIG 633
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD------ 265
++A+ ++ + ++ ++ LY E +Q I++ + N +
Sbjct: 634 YLKEAQQTYTLLQSLDQAPSVFSSNCMIDLYTERLMVEQAKEIFESLKKNNIANEFSYAM 693
Query: 266 -VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+CM + K+ +++EA + K+M K Y +L +Y+ + L + K+ K+
Sbjct: 694 MLCM-----YKKIGRLDEAFQIAKQMRKQGLLTDLLSYNNVLGLYSMDRRLREAKETFKE 748
Query: 325 MAESGCHIG 333
M ESG H G
Sbjct: 749 MIESGIHYG 757
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 135/350 (38%), Gaps = 7/350 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
VVY T++ V +A ++F+ M +G P N ++ L K K +L
Sbjct: 212 VVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQ 271
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M V+ +Y LI ++ + M S G+ P++ T + GR
Sbjct: 272 MVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGR 331
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
E+A M K + + LL YA G ++ ++ L + P V
Sbjct: 332 IEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNI 391
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ + K V EA +F+ M K Y A++ + + D M + G
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ L++ G++ KA+ ++ + + + P S+ +++ K G +
Sbjct: 452 VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKG-LGPCILSFASLINHLCKEGRVFEA 510
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN 437
++IF + + G A F +L+ Y I + A+ + D M + + P+
Sbjct: 511 QRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPD 560
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/419 (19%), Positives = 148/419 (35%), Gaps = 52/419 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y S + + K R + KA+ ++++ P++ V Y TL+ K+A +F
Sbjct: 249 YNSVIHALCKARAVDKAQGILRQMVGNGVQPDN----VTYNTLIHGYSTLGQWKQAVRMF 304
Query: 117 NRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M +G + C+ + L K ++ + M + KL SY L+ +
Sbjct: 305 KEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATA 364
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L M + M +GI P+ IL Y G +A + ++M+ L T
Sbjct: 365 GCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTY 424
Query: 236 RLLLPLYAELGKADQV--------------------ARIWKLCES--------------N 261
++ + +G D I C N
Sbjct: 425 LAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRN 484
Query: 262 PWLDVCMAA----IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
L C+ + I K +V EA+ +F + +T +K +T+L+ Y +S+
Sbjct: 485 KGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSE 544
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ M G + + LV + G ++ IL + KP +Y +I+
Sbjct: 545 AFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDG-LILFRELLHKGVKPTTFTYGIIL 603
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNV 434
D G + +++F M + G + L+ N A + ++ A NV
Sbjct: 604 DGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNV 662
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 128/330 (38%), Gaps = 56/330 (16%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFP--VTSFA--CNQLLILYKRLDKKKVADVL 150
VY+ L+ ++ KAEE+ +++KG + SFA N L + + +++ D++
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517
Query: 151 LLM-EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
+ EK +V + + LID ++ +V +AM S GIEPD T L
Sbjct: 518 IRTGEKADVNI----FTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLL----------------------------PL 241
GR + + +E+ +K +T ++L P
Sbjct: 574 NGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPT 633
Query: 242 YAELGKA--------DQVARIWKLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMS 291
Y+ L + + KLC N D+ + I K + EEAE +F +
Sbjct: 634 YSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIP 693
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ + YT +++ + + + + M +SG + +V+ +E GE+
Sbjct: 694 DYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIV 753
Query: 352 KAD---------SILLKAQQQNKFKPMFSS 372
KA SIL +A + +FS
Sbjct: 754 KAGIYMCRVDGKSILFEASTASMLLSLFSC 783
>gi|225427240|ref|XP_002278451.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
chloroplastic [Vitis vinifera]
Length = 723
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 9/254 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y T++ N KA + F RM G + +L +Y +L K V +VL L
Sbjct: 235 ITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGK--VEEVLSLY 292
Query: 154 EKENV---KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
E+ K ++ +L + G++ D G+ V++ MKS G++P+ L +
Sbjct: 293 ERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKA 352
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM- 268
G+ A ++ +EM G + T L+ +Y + A +W+ SN W +D +
Sbjct: 353 GKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRSNGWPMDFILY 412
Query: 269 -AAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ L EEAE +F+ M K+ + + YTA+L +Y + + L +M+
Sbjct: 413 NTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNVDRAMQLFDEMS 472
Query: 327 ESGCHIGPLAWDAL 340
E G I + L
Sbjct: 473 ELGVQINVMGCTCL 486
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 107/251 (42%), Gaps = 3/251 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M V+L +Y +I + N + E M G+ PD T + + Y G+
Sbjct: 225 MISTGVELDNITYSTIITCAKRCNLFDKAVKWFERMYKTGLMPDEVTYSAILDVYAKLGK 284
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
E+ ++ + K +L ++ E G D + + + +S P L V
Sbjct: 285 VEEVLSLYERGRASGWKPDPIAFAVLGKMFGEAGDYDGIRYVLQEMKSLGVQPNLVVYNT 344
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+EA GK K A ++F+ M + K TAL+K+Y + +L ++M +G
Sbjct: 345 LLEAMGKAGKPGLARSLFEEMVGSGVIPDAKTLTALVKIYGKARWARDALELWERMRSNG 404
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + ++ L+ + + G E+A+ + ++ +P SY +++ Y G++
Sbjct: 405 WPMDFILYNTLLSMCADLGLEEEAEKLFEDMKKSEHCRPDSWSYTAMLNIYGSGGNVDRA 464
Query: 390 EKIFHRMRQVG 400
++F M ++G
Sbjct: 465 MQLFDEMSELG 475
>gi|357120648|ref|XP_003562037.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Brachypodium distachyon]
Length = 807
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 9/325 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y TL+ ++K + F++M +G F N L+ ++ + + ++V+ ++ +M
Sbjct: 255 TYNTLIDTYGKAGQLEKVSDAFSQMLREGVVPDIFTFNTLIHVWGKHHRMEQVSSLVRMM 314
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E+ +Y ILI + + +++ + MK+E + PD+ + L Y + G
Sbjct: 315 EEFQCLPDTRTYNILISLYREIDEIDVAEFYFCKMKAENLVPDTVSCRTLLYGYSTRGMV 374
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAA- 270
KAEA++KEM+ L +T L +Y G + R W+ E + C +A
Sbjct: 375 TKAEALIKEMDESGLVIDEYTQSALTRMYVNTG---MLERSWRWFERFCHQMGSECFSAN 431
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+A+G+ + AE F + K L ++K Y + L + ++ M G
Sbjct: 432 IDAFGEKGCIILAEKAFMCCLER-KMLCVSVCNVMIKAYGLVEKLDEACEVADCMERYGV 490
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
L + +L++L EKA L+ + Y +I+ +AK+ ++H E
Sbjct: 491 LPDYLTYSSLIQLLSTAKLPEKA-LYYLRKMHAAELPIDCVPYSVIISSFAKKDNLHMVE 549
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
+F M G A + L+ AY
Sbjct: 550 CLFREMATSGICADAYVYSILIDAY 574
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 97/255 (38%), Gaps = 26/255 (10%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y LID+ + + M G+ PD T + + + Y G EKAE +
Sbjct: 178 TYGTLIDVYCKGGRERAALLWLGDMCKRGLVPDEVTMSTVLQAYKKAGEYEKAELFFR-- 235
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
RW+ +E K + R + L N +D +GK ++E+
Sbjct: 236 --------RWS--------SESHKRKEGHRCYNLYTYNTLID-------TYGKAGQLEKV 272
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
F +M + + L+ V+ H + + LV+ M E C ++ L+ L
Sbjct: 273 SDAFSQMLREGVVPDIFTFNTLIHVWGKHHRMEQVSSLVRMMEEFQCLPDTRTYNILISL 332
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ E E++ A+ K + +N S L+ Y+ RG + E + M + G V
Sbjct: 333 YREIDEIDVAEFYFCKMKAENLVPDTVSCRTLLYG-YSTRGMVTKAEALIKEMDESGLVI 391
Query: 404 RFKQFQTLVQAYINA 418
L + Y+N
Sbjct: 392 DEYTQSALTRMYVNT 406
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 117/284 (41%), Gaps = 19/284 (6%)
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
++I G L +V + M+ G+ PD T + L + + EKA L++M
Sbjct: 464 VMIKAYGLVEKLDEACEVADCMERYGVLPDYLTYSSLIQLLSTAKLPEKALYYLRKMHAA 523
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA------IEAWGKLNKV 280
L C + + K D + + L +C A I+A+ ++ V
Sbjct: 524 ELP---IDCVPYSVIISSFAKKDNLHMVECLFREMATSGICADAYVYSILIDAYAEVGNV 580
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
+A A F ++K S+ Y +L+K+Y L++ + K + A + +
Sbjct: 581 HQAAAYFGLVTKAGLCESSTIYNSLIKLYTKAGYLAEAHETYKLLKSLDTDTNLYASNCM 640
Query: 341 VKLHVEGGEVEKADSIL--LKAQQ-QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ L+ + V +A I LKA N+F S+ +++ Y K +I M+
Sbjct: 641 ISLYSDHCMVNEAREIFESLKASGCANEF-----SHAMMVCLYKKVARYDEAHRISKEMQ 695
Query: 398 QVGYVARFKQFQTLVQAYINA-KT-PAYGIRDRMRADNVFPNKA 439
+G + + + +++Q YI+ KT A I M A + PN A
Sbjct: 696 ALGLLTQVLSYNSVIQMYISCGKTEEAVKIFQNMLASSTPPNDA 739
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 85/210 (40%), Gaps = 8/210 (3%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + + Y ++I + ++L ++ + M + GI D+ +IL Y G
Sbjct: 520 MHAAELPIDCVPYSVIISSFAKKDNLHMVECLFREMATSGICADAYVYSILIDAYAEVGN 579
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES-----NPWLDVC 267
+A A + L E L+ LY + G + +KL +S N + C
Sbjct: 580 VHQAAAYFGLVTKAGLCESSTIYNSLIKLYTKAGYLAEAHETYKLLKSLDTDTNLYASNC 639
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
M I + V EA +F+ + + H ++ +Y + + K+M
Sbjct: 640 M--ISLYSDHCMVNEAREIFESLKASGCANEFSH-AMMVCLYKKVARYDEAHRISKEMQA 696
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
G L++++++++++ G+ E+A I
Sbjct: 697 LGLLTQVLSYNSVIQMYISCGKTEEAVKIF 726
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 131/324 (40%), Gaps = 20/324 (6%)
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL---ILYK-----RLDKKKVADVLLLMEK 155
VA +A ++FNRMK G T CN LL + + RL K D + K
Sbjct: 135 VACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFI----K 190
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
VK+ S+ ILI N +V+ M+ G PD+ T + GR +
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNP-----WLDVCMAA 270
A +L +M+ L +R T +L+ LG + A + +L N W M
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVM-- 308
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I + K ++ EA + + M Y L+ +H +G L+++M G
Sbjct: 309 ISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGM 368
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ ++ +VK V+ G++++ D + K ++ P +Y ++ + K G +
Sbjct: 369 KPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL-PDIVTYNTLISWHCKVGKMDEAF 427
Query: 391 KIFHRMRQVGYVARFKQFQTLVQA 414
++ M + G T+++A
Sbjct: 428 RLMDEMGRKGLKMDDVTLNTMLRA 451
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 153/352 (43%), Gaps = 11/352 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKG-FPV-TSFACNQLLILYKRLD-KKKVADVL 150
+ Y T+L + +A ++ MK+KG FP T+F N L++ RL K+ A+V+
Sbjct: 233 ITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTF--NILVVGCCRLGWLKEAANVI 290
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
LM + +V ++Y ++I + + ++ E M++ + PD T L
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEH 350
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR-IWKLCESNPWLD-VCM 268
G E+ +++EMEG +K + T +++ + + GK D+V + + K+ ES D V
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410
Query: 269 AAIEAW-GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ +W K+ K++EA + M + K+ +L+ + L + DL+
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARR 470
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G + +++ L+ + + + +A L ++ + P +Y ++ + G +
Sbjct: 471 RGYFVDEVSYGTLIIGYFKHEKASQALR-LWDEMKEKEIIPSIITYNSMIAGLCQMGKTN 529
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
+ + G V + T++ Y A+ ++M N P+
Sbjct: 530 QAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPD 581
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/345 (18%), Positives = 130/345 (37%), Gaps = 36/345 (10%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLME 154
+ L+ N +A V +M+D G P + N +L L K+ + D+LL M+
Sbjct: 200 FNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMK 259
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + + ++ IL+ + L V+E M + PD+ T ++ + GR
Sbjct: 260 NKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIA 319
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAW 274
+A + +EME L T L+ E G +
Sbjct: 320 EAMRLREEMENLKLSPDVVTYNTLINGCFEHGSS-------------------------- 353
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
EE + + M K ++ Y ++K + + + V++M ESGC
Sbjct: 354 ------EEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDI 407
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+ ++ L+ H + G++++A L+ + K + ++ + + +
Sbjct: 408 VTYNTLISWHCKVGKMDEAFR-LMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLC 466
Query: 395 RMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
R+ GY + TL+ Y + + +R D M+ + P+
Sbjct: 467 SARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPS 511
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 66/362 (18%), Positives = 152/362 (41%), Gaps = 19/362 (5%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + LD + K L +A + + F + L+ C +K+A V M
Sbjct: 235 YNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMS 294
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK-ENVKLTQ--FSYKILIDIKGQSND 177
++ N ++ + + + ++A+ + L E+ EN+KL+ +Y LI+ +
Sbjct: 295 QNSVVPDAWTYNVMISGFCK--QGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGS 352
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+++E M+ G++P+S T ++ K +V G+ ++ + +++ME T
Sbjct: 353 SEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNT 412
Query: 238 LLPLYAELGKADQVARIW-KLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + ++GK D+ R+ ++ +D + A + K++EA + +
Sbjct: 413 LISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRG 472
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE----V 350
+ Y L+ Y H+ S+ L +M E + +++++ + G+ +
Sbjct: 473 YFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAI 532
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
+K D +L ++ P +Y I+ Y + G + + ++M + + T
Sbjct: 533 DKLDELL-----ESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNT 587
Query: 411 LV 412
L+
Sbjct: 588 LL 589
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 138/318 (43%), Gaps = 17/318 (5%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYK 166
+ +AE+V N M KG+ + L+ Y R + A+ + M+ + + +Y+
Sbjct: 153 DFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQ 212
Query: 167 ILIDIKGQSNDLTGMDQVVEAM---KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
I++ + + +++ +++ + ++PD ++ + G EKA + EM
Sbjct: 213 IMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEM 272
Query: 224 EGDNLKEHRWTCRLLLPL---YAELGKA-DQVARIWKLCESNPWLDVCMAA--IEAWGKL 277
+ + T L+ Y E+ K DQ+ R + DV A I A+GK
Sbjct: 273 AARGVPQTTVTYNSLMSFETNYKEVSKIYDQMQR------AGLQPDVVSYALLISAYGKA 326
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+ EEA AVF+ M + + K Y LL +A M+ + K + K M C ++
Sbjct: 327 RREEEALAVFEEMLDAGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSY 386
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
++ +V ++E A++ + +Q+ F+P +Y ++ YAK ++ K + M+
Sbjct: 387 TTMLSAYVNASDMEGAEN-FFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMK 445
Query: 398 QVGYVARFKQFQTLVQAY 415
G T++ AY
Sbjct: 446 VNGIRVNQTILTTIMDAY 463
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 140/334 (41%), Gaps = 51/334 (15%)
Query: 45 QLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQ---------------KIPES 89
++ EWL T +F E D+ + KL +AE + + E+
Sbjct: 123 EILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEA 182
Query: 90 F-RGE---------------------VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
+ RG + Y+ +L V G+ K+AEE+F+ + +K PV
Sbjct: 183 YGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVL 242
Query: 128 SF---ACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
+ ++ ++K+ + +K V M V T +Y L+ + +++ +
Sbjct: 243 KPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSFETNYKEVS---K 299
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ + M+ G++PD + A+L Y R+E+A A+ +EM ++ +LL +A
Sbjct: 300 IYDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYNILLDAFA 359
Query: 244 ELGKADQVARIWKLCESN---PWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
G +Q ++K + + P D+C + A+ + +E AE F+R+ + + +
Sbjct: 360 ISGMVEQAKIVFKSMKRDRCSP--DICSYTTMLSAYVNASDMEGAENFFRRLKQDGFRPN 417
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
Y L+K YA L K ++M +G +
Sbjct: 418 VVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRV 451
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 9/203 (4%)
Query: 242 YAELGKADQVARIWKLCESNPW-----LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ +L K + V+ I + + W +D M I A+GKL AE V M+K
Sbjct: 112 FKQLKKWNLVSEILEWLRTQSWWNFSEMDFVML-ITAYGKLGDFNRAEKVLNLMNKKGYA 170
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ +TAL++ Y + + + + ++M G L + ++K VEG + ++A+ +
Sbjct: 171 PNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGSKFKEAEEL 230
Query: 357 L--LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L +++ KP + +I+ + K G+ K+F M G + +L+
Sbjct: 231 FDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTVTYNSLMSF 290
Query: 415 YINAKTPAYGIRDRMRADNVFPN 437
N K + I D+M+ + P+
Sbjct: 291 ETNYKEVS-KIYDQMQRAGLQPD 312
>gi|255661170|gb|ACU25754.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 426
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 174/437 (39%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ +F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVV---VFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALVLNAY 400
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 118/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K + +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVVVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 131/323 (40%), Gaps = 17/323 (5%)
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K +V M V T +SY +I+ G++ +++ MK E + P T +
Sbjct: 152 KCREVFDEMPSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVI 211
Query: 205 KHYVSGGRK-EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN- 261
GG E + EM + ++ T LL A G D+ +++ + ES
Sbjct: 212 NACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGI 271
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P ++ ++ +GKLN++E+ + + M Y LL+ YA+ + +
Sbjct: 272 VPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMG 331
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
+ +QM +GC + L+ L+ + G + + L+ + N P +Y +++ +
Sbjct: 332 VFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNT-DPDAGTYNILIQVF 390
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA------YINAKTPAYGIRDRMRADNV 434
+ G +FH M + + ++ L+ A Y +AK I M V
Sbjct: 391 GEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKK----ILLHMNEKGV 446
Query: 435 FPNKALAAQVAQVDAFRKTAVSE 457
P+ A ++AF + A+ E
Sbjct: 447 VPSS--KAYTGVIEAFGQAALYE 467
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/361 (18%), Positives = 145/361 (40%), Gaps = 40/361 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
+ Y TLL C +AE VF M + G + L+ + +L++ +KV+++L
Sbjct: 241 ITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLRE 300
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME SY +L++ + + V M++ G +++T ++L Y GR
Sbjct: 301 MECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGR 360
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN---------- 261
+ + EM+ N T +L+ ++ E G +V ++ + E N
Sbjct: 361 YDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEG 420
Query: 262 ---------------------------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
P IEA+G+ EEA +F M++
Sbjct: 421 LIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVG 480
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ + Y +L+ +A + + + ++ +M ESG +++ +++ +GG+ E+A
Sbjct: 481 SNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAV 540
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ ++ N +P + ++ Y G + E+ F ++ G + + ++
Sbjct: 541 KSYVEMEKAN-CEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLAL 599
Query: 415 Y 415
Y
Sbjct: 600 Y 600
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 188/455 (41%), Gaps = 60/455 (13%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEV-----VY 96
KALQ W + E+ Y S L+++ + R L A +++ I + RG V +
Sbjct: 94 KALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 97 RTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDK---KKVADVLLL 152
+L+ N +++ +VF MK G + N LL IL KR KKV D +L
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLS 212
Query: 153 ----------------------MEKENVK----LTQF-------SYKILIDIKGQSNDLT 179
M + + L++F +Y L+D ++ +T
Sbjct: 213 TYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVT 272
Query: 180 GMDQVVEAM--KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
VV+ M KS + P+ T L + Y + EKA A+ +EM LK + T
Sbjct: 273 VAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNT 332
Query: 238 LLPLYAELGKADQVARIWKLCESNPWL--DVCM--AAIEAWGKLNKVEEAEAVFKRMSKT 293
L+ E K +++ I + + D C + +++A VF+RMS+
Sbjct: 333 LIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSEL 392
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE-----SGCHIGPL--AWDALVKLHVE 346
+ + Y+AL++ K +DL+ ++ E SG PL A++ + K E
Sbjct: 393 KIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCE 452
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
G+ +KA+ + ++ P SY ++ + K G S ++ M + + F+
Sbjct: 453 TGKTKKAEKAFRQLMRRGTQDP--PSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFE 510
Query: 407 QFQTLVQAYINAKTPAYGIR--DRMRADNVFPNKA 439
+++L+ ++ P ++ ++M + PN +
Sbjct: 511 TYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSS 545
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 146/355 (41%), Gaps = 17/355 (4%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
Y+ LL + NN KA EV+ ++ +G+ + FA N LL + +K +V V M
Sbjct: 227 TYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDM 286
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
++++ + +++Y I+I + G+ + + M +G P+ + + +
Sbjct: 287 KRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMV 346
Query: 214 EKAEAMLKEM--EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-------L 264
+K + +M E N ++ L+ ++LG A + R++ N W
Sbjct: 347 DKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLF----CNMWSFHDEGDR 402
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
D M+ +E+ K EA + ++ + T Y +L K S DL ++
Sbjct: 403 DAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEK 462
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M + G +++ L+ G VE+A I + + + KP S+ +++ K G
Sbjct: 463 MKQDGPSPDIFSYNILISSFGRAGRVEEAVKIF-EELENSSCKPDIISFNSLINCLGKNG 521
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
DI F MR+ G + TL++ + R D M A+ PN
Sbjct: 522 DIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPN 576
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 3/199 (1%)
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
D+L + ++ + Y ++ G+ + + + E MK +G PD + IL +
Sbjct: 423 DLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSF 482
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV-ARIWKLCESNPWLDV 266
GR E+A + +E+E + K + L+ + G D+ R ++ E DV
Sbjct: 483 GRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDV 542
Query: 267 CMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ IE +GK +KVE A +F M + Y LL ++ DL +
Sbjct: 543 VTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAK 602
Query: 325 MAESGCHIGPLAWDALVKL 343
+ + G + + L +L
Sbjct: 603 LKQQGLTPDSITYAVLERL 621
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 139/349 (39%), Gaps = 7/349 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-M 153
Y L+ G N+ +A E+ + MK + T + ++ R + + +L M
Sbjct: 392 TYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 451
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+K Y L+ + + ++E M+ +GI PD L + R
Sbjct: 452 VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRM 511
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAA 270
E+A L EM L+ + T + Y++ G+ + R + C P + + A
Sbjct: 512 EEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 571
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
IE K V EA +VF+ + + Y+ L+ + + + + + ++ E G
Sbjct: 572 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGL 631
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+++L+ + G V+KA S LL+ P +Y +++D K G+I +
Sbjct: 632 LPNAFTYNSLISGSCKQGNVDKA-SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
+F + G + +V Y +K P A+ + + M V P+
Sbjct: 691 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 138/326 (42%), Gaps = 5/326 (1%)
Query: 98 TLLANCVAGNNVKKAEEVFNRM-KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKE 156
+LL + + GN V+ +VF+ M K P N + K + K VLL M ++
Sbjct: 185 SLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEK 244
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+Y ++I ++ L ++ +M +G+ PD T IL + R +A
Sbjct: 245 GCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREA 304
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLDVCMAAIEA 273
+ ML EM LK T L+ + G +Q RI C L + +
Sbjct: 305 KLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNG 364
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
K K+E+A + + M + + ++ Y+ L++ + + +++ +L+ +M +
Sbjct: 365 VCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPT 424
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
L + ++ G ++ ++IL + N KP Y +M +AK G + + I
Sbjct: 425 VLTYSVIINGLCRCGNLQGTNAIL-REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAK 419
RMR+ G + + +L+ + AK
Sbjct: 484 ERMREQGILPDVFCYNSLIIGFCKAK 509
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 112/278 (40%), Gaps = 36/278 (12%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
F+Y LI + ++ Q++E M +GI PD T IL G E+A+ + +
Sbjct: 636 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 695
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+EG L + T YA A ++ + K
Sbjct: 696 IEGRGLTPNCVT-------YA-------------------------AMVDGYCKSKNPTA 723
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A + + M Y +L + K DL ++M E G ++++ L++
Sbjct: 724 AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIE 782
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+ + G++++A+ LL+ + +F P +Y ++D K G + ++++ M++ +
Sbjct: 783 GYCKSGKLQEANH-LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 841
Query: 403 ARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPNK 438
K + +L+ Y I + + + M A + P+K
Sbjct: 842 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 879
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 134/325 (41%), Gaps = 8/325 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLM 153
Y L+ + +A +F+ +++KG +F N L+ K+ + K + +L M
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ + +Y ILID ++ ++ + + ++ G+ P+ T A + Y
Sbjct: 662 CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP 721
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCMAA-I 271
A +L+EM + + ++L + K ++ +++ + E V I
Sbjct: 722 TAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLI 781
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKH--YTALLKVYADHKMLSKGKDLVKQMAESG 329
E + K K++EA + + M + K+ H YT+L+ M+ + K L +M E
Sbjct: 782 EGYCKSGKLQEANHLLEEMIE--KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 839
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +L+ + G + + S L + +P +Y +++D Y + G++
Sbjct: 840 VMPTAKTYTSLLHGYHNIGNMSEV-SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQA 414
K+ + G + L+QA
Sbjct: 899 CKLKDEILVKGMPMSVAAYDALIQA 923
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM+ + + LL +Y E K + I+ ++ E LD+ C
Sbjct: 95 FREARSLISEMKTAGVTPDTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A SI + ++
Sbjct: 89 FGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 84/442 (19%), Positives = 178/442 (40%), Gaps = 67/442 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLC---- 58
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMK 120
DY+ + + ++L+ F ++V + N + ++A + + MK
Sbjct: 59 DYSKAISIFSRLK------------RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 106
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVK--LTQFSYKILIDIKGQSND 177
G + + + LL +Y ++ KK + L + E +K L + I+ID+ GQ
Sbjct: 107 TAGVTPDTASYSTLLTMY--VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGM 164
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
D++ M+ GIEP+ + L + Y +A + + M+ N++++ T
Sbjct: 165 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 224
Query: 238 LLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ +Y E KA+ + + + P I WGK+ K++ A +F+++ +
Sbjct: 225 MMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y ++ Y +++ K L+ ++ + D + + G +E+A
Sbjct: 285 VDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD----NIPRDIAIHILAGAGRIEEAT 340
Query: 355 SILLKAQQQNKFKP---------MFSSY-------------------------MLIMDQY 380
+ +A + K +FS Y L+++ Y
Sbjct: 341 WVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAY 400
Query: 381 AKRGDIHSTEKIFHRMRQVGYV 402
K + ++ M++VG V
Sbjct: 401 GKLHEFDKANDVYMEMQEVGCV 422
>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 938
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVAD 148
+ V Y TL+ + N + A ++++M +G PV L+ L+K D ++
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
++ ++N +Y L+D ++ DL+ + ++ M + + P+ T + + YV
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 410
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA------RIWKLCESNP 262
G E+A ++L++ME N+ + +T ++ + GK + R+ + E+N
Sbjct: 411 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 470
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
LD A + ++ +++E + + K M L +YT+L+ V+
Sbjct: 471 ILD---ALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 527
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++M E G ++++ L+ ++ G+V AD K ++ +P +++ ++M+ K
Sbjct: 528 EEMQERGMPWDVVSYNVLISGMLKFGKV-GADWA-YKGMREKGIEPDIATFNIMMNSQRK 585
Query: 383 RGDIHSTEKIFHRMRQVG 400
+GD K++ +M+ G
Sbjct: 586 QGDSEGILKLWDKMKSCG 603
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 161/423 (38%), Gaps = 57/423 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y+S ++ K L++A S ++K +P F Y T++ + A E+
Sbjct: 402 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF----TYGTVIDGLFKAGKEEMAIELS 457
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ G ++ + L+ KR+ + K+V ++ M + V L Q +Y LID+ +
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Query: 176 ND--------------------------LTGM--------DQVVEAMKSEGIEPDSSTQA 201
D ++GM D + M+ +GIEPD +T
Sbjct: 518 GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFN 577
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LC 258
I+ G E + +M+ +K +C +++ + E GK ++ I L
Sbjct: 578 IMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 637
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK---KLSTKHYTALLKVYADHKML 315
E +P L ++ K + A+A+FK KLS + Y L+ M
Sbjct: 638 EIHPNLTTYRIFLDTSSKHKR---ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMT 694
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML 375
K ++ M G + +++L+ + G V KA S + P ++Y
Sbjct: 695 KKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALST-YSVMMEAGISPNVATYNT 753
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV--QAYINAKTPAYGIRDRMRADN 433
I+ + G I +K M+ G + L+ QA I + I M AD
Sbjct: 754 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 813
Query: 434 VFP 436
+ P
Sbjct: 814 LVP 816
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 132/313 (42%), Gaps = 16/313 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y T+++ +A + + M G + + N L+ + ++ A L+
Sbjct: 162 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV-- 219
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E +L ++ IL+ +L +++ M G +PD T + + GG+
Sbjct: 220 -DEISELNLITHTILLS---SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKV 275
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD----QVARIWKLCESNPWLDVCMA 269
+ +L+EME ++ + T L+ L KA+ +A ++ +D+ +
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVD---SLFKANIYRHALALYSQMVVRGIPVDLVVY 332
Query: 270 AIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ G K + EAE FK + + + + YTAL+ LS + ++ QM E
Sbjct: 333 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 392
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+ + +++ +V+ G +E+A S+L K + QN F +Y ++D K G
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF-TYGTVIDGLFKAGKEE 451
Query: 388 STEKIFHRMRQVG 400
++ MR +G
Sbjct: 452 MAIELSKEMRLIG 464
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 1/163 (0%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
VY TL+A KKA V M+ +GF + N L+ Y +K +M
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ + +Y +I + + +D+ + MKS G+ PD T L G
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
+ + + EM D L T +L+ +A +GK Q + K
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 842
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALILNAY 400
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|410110143|gb|AFV61151.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
velutina]
Length = 382
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 67
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 68 TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 127
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 188 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 246
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 247 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 288
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 145/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 43 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 102
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 103 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 162
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 222
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + VE + +F+ M
Sbjct: 223 SIWGKVGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 256
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 257 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 306
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 307 AVDAGEVKDITVFERMVHLLSKYKKYSNV---VEVFDKMRGLGYFPDSDVIAIVLNAY 361
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 150/367 (40%), Gaps = 15/367 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
VVY +L+ +K+A E F M+ +G + N L+ R K+V L L
Sbjct: 1121 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 1180
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M F++ ILID + + Q++E M+ +G EPD T L G+
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
E A + + + +K + ++ +L+ Y + K D+ R ++ P
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A + +V A+ +F M + L Y LL + L + DL + + ++
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Query: 330 CHIGPLAWDALVKLHVEGGEVEKA----DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ L+ G++E+A D I +N +P +Y ++++ +G
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEI-----SKNGLEPDTIAYNILINGLCNKGM 1415
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNKALAAQ 443
+ K+ +M + G + F ++Q + N A + + MR N P++A+ +
Sbjct: 1416 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM 1475
Query: 444 VAQVDAF 450
+ + +F
Sbjct: 1476 LLCLASF 1482
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 17/290 (5%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL---LILYKRL-D 142
P++F + L+ V +A+++ M+ KG N L L L +L D
Sbjct: 1188 PDAF----TFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243
Query: 143 KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
K+ + L +KL FSY ILI+ + + + E M+ +G++P + T
Sbjct: 1244 ATKLFESL---ADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300
Query: 203 LAKHYVSGGRKEKAEAMLKEME--GDNLKEHRWTCRLLLPLY--AELGKADQVARIWKLC 258
L GR A+ + EM+ G LK + C LL L L +A + + K
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTY-CVLLDGLCKNGHLEEAMDLFQSIKKT 1359
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
E P ++V ++ + K+EEA F +SK + T Y L+ + MLS+
Sbjct: 1360 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 1419
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
L+ QM E GC + ++ +++ ++ E+ +A +L + + +N F P
Sbjct: 1420 VKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN-FSP 1468
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/383 (18%), Positives = 163/383 (42%), Gaps = 41/383 (10%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVY--RTLLANCVAGNNVKKAEEVFN 117
E Y S + ++ K L +A + + ++ R Y T++ + +A +
Sbjct: 273 EVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLE 332
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME--KENVKLTQFSYKILIDIKGQS 175
R + KG + A N +L +++ K V + L + E K++ +Y ILID+ ++
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGK--VDEALRVFEEMKKDAAPNLSTYNILIDMLCRA 390
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L ++ ++M+ G+ P+ T I+ + ++A A+ ++M+
Sbjct: 391 GKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMD----------- 439
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+K+C + + C + I+ GK+ +V++A ++++M +
Sbjct: 440 -------------------YKVCTPDE-ITFC-SLIDGLGKVGRVDDAYKIYEKMLDSDC 478
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ ++ YT+L+K + +H G + K M C + + + GE EK +
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + + + +F P SY +++ K G + T ++F+ M++ G V + + ++ +
Sbjct: 539 MFEEIKSR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 416 INAK--TPAYGIRDRMRADNVFP 436
AY + + M+ P
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEP 620
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/330 (18%), Positives = 138/330 (41%), Gaps = 12/330 (3%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KK 145
PES+ ++ ++A C N +++ M GF + C ++++ + +K ++
Sbjct: 98 PESYNSLLL---VMARC---RNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLRE 151
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
DV+ M K + +Y LI N M + + M+ G EP L +
Sbjct: 152 GFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIR 211
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---P 262
+ GR + A ++L EM+ +L + + + ++GK D + + E+N P
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
+ I K N+++EA +F+ + K + T Y ++ Y + L+
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++ G +A++ ++ + G+V++A + + + P S+Y +++D +
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVF--EEMKKDAAPNLSTYNILIDMLCR 389
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
G + ++ M++ G + +V
Sbjct: 390 AGKLDCAFELRDSMQKAGLFPNVRTVNIMV 419
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 114/260 (43%), Gaps = 8/260 (3%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
SY ILI ++ ++ +MK +G D+ I+ + G+ KA +L+EM
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM--AAIEAWGKLNKV 280
+ + T ++ A++ + D+ +++ +S L+V + + I+ +GK+ ++
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 281 EEAEAVFKRMSKTWKKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
+EA + + + + K L+ YT +LL + +++ + M E C + +
Sbjct: 674 DEAYLILEELMQ--KGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L+ + + KA + + Q+ KP SY ++ AK G+I +F R +
Sbjct: 732 ILINGLCKVRKFNKA-FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 399 VGYVARFKQFQTLVQAYINA 418
G V + +++ N
Sbjct: 791 NGGVPDSACYNAMIEGLSNG 810
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 16/119 (13%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+K+ +K + SY +I ++ ++ + + K+ G PDS+ + + +G R
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLL----------------PLYAELGKADQVARIW 255
A ++ +E L H TC +LL + E GKA AR W
Sbjct: 813 AMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAARSW 871
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 174/437 (39%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRXEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALVLNAY 400
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 118/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G + EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RXEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|255661160|gb|ACU25749.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDKA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDKAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPESNVIALVLNAY 400
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ +KA + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPESNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + I+ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ ++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNXMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A SI + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSIFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A +F M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALVLNAY 400
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 139/349 (39%), Gaps = 7/349 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-M 153
Y L+ G N+ +A E+ + MK + T + ++ R + + +L M
Sbjct: 383 TYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 442
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+K Y L+ + + ++E M+ +GI PD L + R
Sbjct: 443 VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRM 502
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCMAA 270
E+A L EM L+ + T + Y++ G+ + R + C P + + A
Sbjct: 503 EEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 562
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
IE K V EA +VF+ + + Y+ L+ + + + + + ++ E G
Sbjct: 563 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGL 622
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+++L+ + G V+KA S LL+ P +Y +++D K G+I +
Sbjct: 623 LPNAFTYNSLISGSCKQGNVDKA-SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 681
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
+F + G + +V Y +K P A+ + + M V P+
Sbjct: 682 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 730
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Query: 181 MDQVVE---AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+D+ +E +M +G+ PD T IL + R +A+ ML EM LK T
Sbjct: 257 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNA 316
Query: 238 LLPLYAELGKADQVARI---WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ + G +Q RI C L + + K K+E+A + + M +
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ ++ Y+ L++ + + +++ +L+ +M + L + ++ G ++ +
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+IL + N KP Y +M +AK G + + I RMR+ G + + +L+
Sbjct: 437 AIL-REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIG 495
Query: 415 YINAK 419
+ AK
Sbjct: 496 FCKAK 500
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 112/278 (40%), Gaps = 36/278 (12%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
F+Y LI + ++ Q++E M +GI PD T IL G E+A+ + +
Sbjct: 627 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 686
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+EG L + T YA A ++ + K
Sbjct: 687 IEGRGLTPNCVT-------YA-------------------------AMVDGYCKSKNPTA 714
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A + + M Y +L + K DL ++M E G ++++ L++
Sbjct: 715 AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIE 773
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+ + G++++A+ LL+ + +F P +Y ++D K G + ++++ M++ +
Sbjct: 774 GYCKSGKLQEANH-LLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 832
Query: 403 ARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPNK 438
K + +L+ Y I + + + M A + P+K
Sbjct: 833 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDK 870
>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALVLNAY 400
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|255661208|gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 130/294 (44%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K GI+PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGIKPDLVAYNSMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L+ +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKD 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ ++ ++ + E EKA++ L++ +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNTMMMIYGKTLEHEKANN-LIQEMHNRGIEPNAITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G +QT++ AY A A+ R + R DN+ + A+
Sbjct: 274 AMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 327
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 180/436 (41%), Gaps = 64/436 (14%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALA-MANLRTRRMYGKALQLSEWLETNKKL-DF- 58
+PD +STL T + +EG + AL+ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG----LFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 59 -------------IERD---YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLL 100
I+ D Y S +++ K + ++A S I ++ E+ V Y TLL
Sbjct: 62 KAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLL 121
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVK 159
V +A VF M++ + CN ++ +Y +LD K AD L M K ++
Sbjct: 122 TMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIE 181
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
SY L+ + G + + M+ + IE + T + Y EKA +
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNL 241
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNK 279
++EM ++ + T Y+ + I WGK+ K
Sbjct: 242 IQEMHNRGIEPNAIT-------YSTI-------------------------ISIWGKVGK 269
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
++ A +F+++ + ++ Y ++ Y +++ K L+ ++ + D
Sbjct: 270 LDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPD----NIPRDT 325
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
+ + G +E+A + +A + K + + + ++D ++K + ++F +MR +
Sbjct: 326 AIHILAGAGRIEEATWVFRQAIDAGEVKDI-TVFERMIDLFSKYKKYPNVVEVFEKMRGL 384
Query: 400 GYVARFKQFQTLVQAY 415
GY + ++ AY
Sbjct: 385 GYFSDSNVISLVLNAY 400
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 98/231 (42%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ + K Y +++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRAGIKPDLVAYNSMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M E+G +++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + +K+F MR+VG + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAE 198
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 149/359 (41%), Gaps = 17/359 (4%)
Query: 67 LDLIAKLRGLQKAESYIQKIPES-FR-GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF 124
LD + K + + + I ES FR + +Y + V ++V K E+FNRMK
Sbjct: 524 LDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRI 583
Query: 125 PVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
T F N L+ ++ + K A+ L M + + +Y LID + + +
Sbjct: 584 SPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFK 643
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
V E MK++ IEP T L K G E AE +L EM+ +T +L Y+
Sbjct: 644 VRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYS 703
Query: 244 ELGKADQVARIWKL-CESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
KAD +++ +S ++ C + A K ++E+AE + R +
Sbjct: 704 SNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEV 763
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y ++ Y+ L + + M + G LA++ L++ E G++E A+
Sbjct: 764 LYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAE------ 817
Query: 361 QQQNKFK-----PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
Q+ NK K P +Y +++ Y ++ + + M G + + TL+
Sbjct: 818 QEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINC 876
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 137/359 (38%), Gaps = 40/359 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA------ 147
+ + TLL V+ AE V MKD+GF +F + L Y DK A
Sbjct: 658 ITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET 717
Query: 148 -------------DVLL--------------LMEKENVK---LTQFSYKILIDIKGQSND 177
+LL ++ +E K + Y +ID + D
Sbjct: 718 AVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGD 777
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
L G ++AM+ +G++PD L + + G E AE + +M+ + T +
Sbjct: 778 LVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNI 837
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ Y + D+ + K E N P + I K +K+ EA+ V + M
Sbjct: 838 LIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 897
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ + Y L+ + ++M + G + + ++ L+ G++ +A+
Sbjct: 898 VSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAE 957
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+LL+ ++ KP +Y ++ Y G++ ++ M+ G K + L+
Sbjct: 958 DMLLEISRKG-LKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS 1015
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 125/311 (40%), Gaps = 44/311 (14%)
Query: 94 VVYRTLLANCVA-GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V Y TL+ NC+ G+ + +A+ V M+D+G N L+ K K+ D
Sbjct: 868 VSYGTLI-NCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLID--GCCSKGKIEDAFRF 924
Query: 153 ME---KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
E K+ ++L +Y LID + L + ++ + +G++PD T L Y
Sbjct: 925 SEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRF 984
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
G ++ A+ +EM+ +K T LL+ L + G
Sbjct: 985 AGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG----------------------- 1021
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+E + +F MS L Y +L YA H + K +L KQM E
Sbjct: 1022 ----------IELTKKIFGEMSLQPDLLV---YNGVLHCYAVHGDMDKAFNLQKQMIEKS 1068
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++L+ ++ G++ + S L+ + + +P +Y +I+ + + D
Sbjct: 1069 IGLDKTTYNSLILGQLKVGKLCEVRS-LIDEMKAREMEPEADTYDIIVKGHCEMKDYMGA 1127
Query: 390 EKIFHRMRQVG 400
+ M++ G
Sbjct: 1128 YVWYREMQEKG 1138
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 95/222 (42%), Gaps = 4/222 (1%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR-KEKAEAMLK 221
FSY +L + +S ++ + A+++EGI P S + +L H V + + L
Sbjct: 483 FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLN 542
Query: 222 EMEGDNLKEHRWTCRLLLPL--YAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNK 279
+E D + + +++GK ++ K +P + + I+ K+ +
Sbjct: 543 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQ 602
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
+++AE +F M S Y L+ Y K + ++M + ++
Sbjct: 603 MKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNT 662
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
L+K + G VE A+++L + + Q F P ++ ++ D Y+
Sbjct: 663 LLKGLFKAGMVEDAENVLTEMKDQG-FVPDAFTFSILFDGYS 703
>gi|357442727|ref|XP_003591641.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|92882355|gb|ABE86686.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355480689|gb|AES61892.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 144/358 (40%), Gaps = 20/358 (5%)
Query: 76 LQKAESYIQKIPESFR---------GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
L+ + ++ PES G Y TL+ K+A E F +M +G P
Sbjct: 259 LRPSNKHMMDAPESVERALFSNASFGSHTYNTLIDTYGKAGQHKEASETFAKMLKQGIPP 318
Query: 127 TSFACNQLLIL---YKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
T+ N ++ + + RL++ V+ +L M + +Y LI + + ND+ +
Sbjct: 319 TTVTFNTMIHICGNHGRLEE--VSSLLRKMGELRCSPDTRTYNTLISLHTKHNDIDMATK 376
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ MK +EPD + L Y +AE ++ EM+ L+ ++T L +Y
Sbjct: 377 YFKRMKESYLEPDPVSYRTLLYAYSIRKMVCEAEELITEMDEKGLEIDQFTQSALTRMYI 436
Query: 244 ELGKADQVARIW--KLCESNPWLDVCMAA-IEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
E G ++ + +W + + C AA I+A+G+ + EAE VF + K LS
Sbjct: 437 EAGMPER-SLLWFQRFHRAGNMTSECYAANIDAYGERGHISEAEKVF-LWCQERKNLSAV 494
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+ ++K Y K K L M + G ++ +L+++ + A LK
Sbjct: 495 EFNVMIKAYGVGKYYDKACQLFDSMDKHGVAADRCSYSSLIQVLASADQPHIAKP-YLKR 553
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
Q Y ++ + K G + E ++ M G + L+ A A
Sbjct: 554 MQVAGLVTNCIPYCAVISCFVKLGQLEMAEGVYKEMIGHGVKPDIIVYGVLINALYGA 611
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 150/369 (40%), Gaps = 22/369 (5%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y + + L K + A Y +++ ES+ V YRTLL V +AEE+
Sbjct: 356 RTYNTLISLHTKHNDIDMATKYFKRMKESYLEPDPVSYRTLLYAYSIRKMVCEAEELITE 415
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDL 178
M +KG + F + L +Y + + + +T Y ID G+ +
Sbjct: 416 MDEKGLEIDQFTQSALTRMYIEAGMPERSLLWFQRFHRAGNMTSECYAANIDAYGERGHI 475
Query: 179 TGMDQVV----EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
+ ++V E +E + ++ K Y G +KA + M+ + R +
Sbjct: 476 SEAEKVFLWCQERKNLSAVEFN-----VMIKAYGVGKYYDKACQLFDSMDKHGVAADRCS 530
Query: 235 CRLLLPLYAELGKADQ--VARIW-KLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFK 288
L+ + L ADQ +A+ + K + + C+ A I + KL ++E AE V+K
Sbjct: 531 YSSLIQV---LASADQPHIAKPYLKRMQVAGLVTNCIPYCAVISCFVKLGQLEMAEGVYK 587
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M K Y L+ + + ++ +G + +++L+KL+ + G
Sbjct: 588 EMIGHGVKPDIIVYGVLINALYGAGRVKEAISYANEIKRAGLPGNTVIYNSLIKLYTKVG 647
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
+ +A Q + ++SS +I Y K+ + ++IF +++ G F F
Sbjct: 648 NLREAQETYRLLQSSEEGPAVYSSNCMI-GLYTKQSMVEQAKEIFETLKKNGTANEF-SF 705
Query: 409 QTLVQAYIN 417
++ Y N
Sbjct: 706 AMMLCLYKN 714
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 144/340 (42%), Gaps = 19/340 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYK 166
+KA VF+ M G T + N + LI+ RLD+ V V+ ++ N K+++ +
Sbjct: 797 EKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYV--VVEELQDMNFKISKSTVL 854
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPD----SSTQAILAKHYVSGGRKEKAEAMLKE 222
+L+D ++ D+ + ++ MK+ G P+ S ++L H R E M+ E
Sbjct: 855 LLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHH----NRFRDVELMIAE 910
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN--PWLDVCMAAIEAWGKLNK 279
MEG K LL +Y G D+ ++++ + E+ P D I + + +
Sbjct: 911 MEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFR 970
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
EE + M K + Y +LL A ++ + + ++M + +
Sbjct: 971 PEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHM 1030
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
++K++ G KA++ LL +++ +P ++ ++M Y G E + + ++
Sbjct: 1031 MMKIYRNAGNHSKAEN-LLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSS 1089
Query: 400 GYVARFKQFQTLVQAYINAKTPAYGIRD--RMRADNVFPN 437
+ T+ AY+ +G M+ D V P+
Sbjct: 1090 SLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPD 1129
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 140/344 (40%), Gaps = 44/344 (12%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILID 170
AEEVF R +G V F N ++ +Y R + A LL M + S+ LI+
Sbjct: 207 AEEVFLRFAGEGATVQVF--NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLIN 264
Query: 171 IKGQSNDL---TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+ +S L +D + E +S G+ PD T L E A + ++M
Sbjct: 265 ARSKSGCLAAGVALDLLFEVRQS-GLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASE 323
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEEAE 284
+ WT ++ ++ GKA++ R+++ L E D + + A+ K V++ E
Sbjct: 324 CRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVE 383
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW----DAL 340
+++ K K + Y ++ +Y L L +M GC + + D+L
Sbjct: 384 HTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSL 443
Query: 341 VKLH--VEGGEVEK------------ADSILL--------KAQQQNKFKPMFSS------ 372
K++ E G+V + A S L+ +A +N F M +S
Sbjct: 444 GKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDR 503
Query: 373 --YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
Y++++D +A+ GD ++ +M Y +Q L+ A
Sbjct: 504 LAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVA 547
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/403 (18%), Positives = 153/403 (37%), Gaps = 49/403 (12%)
Query: 42 KALQLSEWLETNKKLDFIERDYASCLDLIAKLRGL---QKAESYIQKIPESFRGE----V 94
+A+ S W +++ R A +A + G+ + +S +++ F GE
Sbjct: 163 RAVGESSWRRALDAFEWLARSSAPASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGATVQ 222
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR---LDKKKVADVLL 151
V+ ++ A ++ + M D+G + N L+ + L D+L
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLF 282
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ + ++ +Y LI QS++L V E M + PD T + + G
Sbjct: 283 EVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCG 342
Query: 212 RKEKAEAMLKEM---------------------EGD--------------NLKEHRWTCR 236
+ E+AE + +E+ EG+ K++ T
Sbjct: 343 KAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYN 402
Query: 237 LLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
++ +Y ++G+ D ++ + P I++ GK+N++ EA V + M+
Sbjct: 403 TMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLEDMTDA 462
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K + ++AL+ YA + ++ M SG LA+ ++ + G+ EK
Sbjct: 463 GLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARSGDTEKM 522
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ K N ++P Y +++ AK E++ M
Sbjct: 523 LCLYRKMMNDN-YRPDDDMYQVLLVALAKEDKCEEIEEVIQDM 564
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 100/271 (36%), Gaps = 35/271 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LM 153
+ LL A N + +V+ + + G N L+++Y R + + LL M
Sbjct: 922 ILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEM 981
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
K + SYK L+ ++ DQ+ E M+S+ + + S ++ K Y + G
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNH 1041
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
KAE +L M+ D ++ T +L+ Y G+
Sbjct: 1042 SKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQP------------------------- 1076
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
EAE V + + ++ST Y+ + Y + + G + +M G
Sbjct: 1077 -------REAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPD 1129
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
W ++ + AD+ILL Q+
Sbjct: 1130 HQVWTCFIR--AASLCEQTADAILLLKSLQD 1158
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y L+ + L + + M S C ++A+V +H G+ E+A+ L +
Sbjct: 296 YNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAER-LFREL 354
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAK 419
+ F P +Y ++ +AK G++ E ++ + G+ + T++ Y +
Sbjct: 355 VEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRL 414
Query: 420 TPAYGIRDRMRADNVFPN 437
A G+ D MRA P+
Sbjct: 415 DLAVGLYDEMRAMGCTPD 432
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENRKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPM--FSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K + F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDIXVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALILNAY 400
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENRKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDIXVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14770, mitochondrial; Flags: Precursor
Length = 940
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVAD 148
+ V Y TL+ + N + A ++++M +G PV L+ L+K D ++
Sbjct: 293 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 352
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
++ ++N +Y L+D ++ DL+ + ++ M + + P+ T + + YV
Sbjct: 353 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYV 412
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA------RIWKLCESNP 262
G E+A ++L++ME N+ + +T ++ + GK + R+ + E+N
Sbjct: 413 KKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNY 472
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
LD A + ++ +++E + + K M L +YT+L+ V+
Sbjct: 473 ILD---ALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 529
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
++M E G ++++ L+ ++ G+V AD K ++ +P +++ ++M+ K
Sbjct: 530 EEMQERGMPWDVVSYNVLISGMLKFGKV-GADWA-YKGMREKGIEPDIATFNIMMNSQRK 587
Query: 383 RGDIHSTEKIFHRMRQVG 400
+GD K++ +M+ G
Sbjct: 588 QGDSEGILKLWDKMKSCG 605
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 161/423 (38%), Gaps = 57/423 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y+S ++ K L++A S ++K +P F Y T++ + A E+
Sbjct: 404 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF----TYGTVIDGLFKAGKEEMAIELS 459
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQS 175
M+ G ++ + L+ KR+ + K+V ++ M + V L Q +Y LID+ +
Sbjct: 460 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 519
Query: 176 ND--------------------------LTGM--------DQVVEAMKSEGIEPDSSTQA 201
D ++GM D + M+ +GIEPD +T
Sbjct: 520 GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFN 579
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LC 258
I+ G E + +M+ +K +C +++ + E GK ++ I L
Sbjct: 580 IMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 639
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK---KLSTKHYTALLKVYADHKML 315
E +P L ++ K + A+A+FK KLS + Y L+ M
Sbjct: 640 EIHPNLTTYRIFLDTSSKHKR---ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMT 696
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML 375
K ++ M G + +++L+ + G V KA S + P ++Y
Sbjct: 697 KKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALST-YSVMMEAGISPNVATYNT 755
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV--QAYINAKTPAYGIRDRMRADN 433
I+ + G I +K M+ G + L+ QA I + I M AD
Sbjct: 756 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG 815
Query: 434 VFP 436
+ P
Sbjct: 816 LVP 818
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 132/313 (42%), Gaps = 16/313 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
V Y T+++ +A + + M G + + N L+ + ++ A L+
Sbjct: 164 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALV-- 221
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E +L ++ IL+ +L +++ M G +PD T + + GG+
Sbjct: 222 -DEISELNLITHTILLS---SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKV 277
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD----QVARIWKLCESNPWLDVCMA 269
+ +L+EME ++ + T L+ L KA+ +A ++ +D+ +
Sbjct: 278 LEGGLLLREMEEMSVYPNHVTYTTLVD---SLFKANIYRHALALYSQMVVRGIPVDLVVY 334
Query: 270 AIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ G K + EAE FK + + + + YTAL+ LS + ++ QM E
Sbjct: 335 TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLE 394
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+ + +++ +V+ G +E+A S+L K + QN F +Y ++D K G
Sbjct: 395 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF-TYGTVIDGLFKAGKEE 453
Query: 388 STEKIFHRMRQVG 400
++ MR +G
Sbjct: 454 MAIELSKEMRLIG 466
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 1/163 (0%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
VY TL+A KKA V M+ +GF + N L+ Y +K +M
Sbjct: 682 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 741
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ + +Y +I + + +D+ + MKS G+ PD T L G
Sbjct: 742 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 801
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
+ + + EM D L T +L+ +A +GK Q + K
Sbjct: 802 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 844
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSXFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSXFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/437 (18%), Positives = 174/437 (39%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A F M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALVLNAY 400
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + + + LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 153/361 (42%), Gaps = 21/361 (5%)
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
D LDL+ ++RG +P S + Y +++ V N+++A V + M
Sbjct: 289 DLVMALDLLREMRGKLG-------VPAS---QETYTSVIVAFVKEGNMEEAVRVMDEMVG 338
Query: 122 KGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G P++ A L+ Y + ++ K D+ ME+E + + + ++++ ++ ++
Sbjct: 339 FGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEK 398
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE---HRWTCRL 237
+ MKS I P S +L + G K ++ E+ D+ + H + C
Sbjct: 399 AIEFYMRMKSVRIAPSS----VLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNK 454
Query: 238 LLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+ L+ + GK D K+ E P + + A ++ ++ A ++F M +
Sbjct: 455 IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ + Y+ L+ + +K D++ QM S + ++ ++ + G+ KA
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+L ++ ++ +SY I+D + K GD S + + M + G F +L+
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 415 Y 415
+
Sbjct: 635 F 635
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 70/348 (20%), Positives = 130/348 (37%), Gaps = 25/348 (7%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
P +F Y L+ + + A +V N+M F N ++ ++ +
Sbjct: 517 PNNF----TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572
Query: 147 ADVLL--LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
A +L L++++ ++ SY +ID + D + M G P+ T L
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL----GKADQVARIWKLCES 260
+ R + A M EM+ LK L LP Y L K + + + L
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELK-------LDLPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 261 NPWL------DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
P L V + I + L K++ A ++K+M YT ++
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
++ DL ++ + G + LV + G+ KA S +L+ ++ P Y
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKA-SKMLEEMKKKDVTPNVLLYS 804
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPA 422
++ + + G+++ ++ M + G V F LV + K PA
Sbjct: 805 TVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRV-EKPPA 851
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 4/253 (1%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +ID + L ++ M S G+ P+ L K S R E+AE +L EM
Sbjct: 290 YATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF 349
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKLNKVE 281
+ T +L+ + G D+V + ++ E DV I + K ++
Sbjct: 350 DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLID 409
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA + + M+ + +T YT +LK + ++L+ QM + GC P+ ++ L+
Sbjct: 410 EAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLI 469
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G VE+A LLK N P SY ++D K G+ ++ + M + G
Sbjct: 470 NFLCKKGLVEQAIE-LLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGM 528
Query: 402 VARFKQFQTLVQA 414
+ ++ A
Sbjct: 529 SPNTIIYSSIASA 541
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/304 (18%), Positives = 115/304 (37%), Gaps = 34/304 (11%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-M 153
+Y T++ ++ A + NRM G N LL D+ + A+ LL M
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
++ L ++ IL+D Q+ + + +V+E M G PD T + + G
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLI 408
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
++A +L+ M + + + ++L LC + W+D
Sbjct: 409 DEAVMLLRSMAACGCRPNTVSYTIVL---------------KGLCSAERWVD-------- 445
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
AE + +M + + + L+ ++ + +L+KQM +GC
Sbjct: 446 ---------AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 496
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+++ ++ + G ++A LL + P Y I + G I+ ++F
Sbjct: 497 LISYSTVIDGLGKAGNTDEALE-LLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMF 555
Query: 394 HRMR 397
++
Sbjct: 556 ENIQ 559
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/358 (19%), Positives = 145/358 (40%), Gaps = 7/358 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V Y T++ + V++A +FN M+ G + N +++ L ++ + V
Sbjct: 116 VTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHE 175
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME +++ +SY ILID ++ L ++ + M GI P + T ++
Sbjct: 176 MEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT 235
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCMAA- 270
++A + K M + R+T +L+ + + GK D+ R+ K + + DV +
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 271 -IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I + +V++A + + M K K + L+ + + ++++ M SG
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ LV H G+ E+A LL P +Y ++ K +
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARE-LLSDMVARGLAPNVVTYTALVSGLCKANRLPEA 414
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPNKALAAQVA 445
+F +M+ G + L+ + +A G++ M + P+ + +A
Sbjct: 415 CGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 118/322 (36%), Gaps = 44/322 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y +D +AK L A + QK+ S V Y +L+ N+ A E+F M
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
+G P + +Y ++ID + L
Sbjct: 73 RRGCPPSPV----------------------------------TYNVMIDASCKRGMLEE 98
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+++ M +G PD T + R E+A + EME +R + ++
Sbjct: 99 ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIIL 158
Query: 241 LYAELGKADQVARIWKLCES-----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ K DQ +++ E+ + W + I+ K K+ EA +F+RM +
Sbjct: 159 GLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL--IDGLAKAGKLNEAYKLFQRMLDSGI 216
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
S Y ++ L + +L K M GC ++ L+ H + G++++A
Sbjct: 217 TPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFR 276
Query: 356 ILLKAQQQNKFKPMFSSYMLIM 377
LLK + P +Y ++
Sbjct: 277 -LLKRMTDDGHVPDVVTYSTLI 297
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+ K K+ +A +F+++ + ST YT+L+ ++L M GC
Sbjct: 17 IDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGC 76
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
P+ ++ ++ + G +E+A L+K ++ P +Y +MD K +
Sbjct: 77 PPSPVTYNVMIDASCKRGMLEEACD-LIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 135
Query: 391 KIFHRMRQVGYVARFKQFQTLV 412
+F+ M ++G + T++
Sbjct: 136 LLFNEMERLGCTPNRRSHNTII 157
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 144/340 (42%), Gaps = 19/340 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYK 166
+KA VF+ M G T + N + LI+ RLD+ V V+ ++ N K+++ +
Sbjct: 797 EKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYV--VVEELQDMNFKISKSTVL 854
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPD----SSTQAILAKHYVSGGRKEKAEAMLKE 222
+L+D ++ D+ + ++ MK+ G P+ S ++L H R E M+ E
Sbjct: 855 LLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHH----NRFRDVELMIAE 910
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN--PWLDVCMAAIEAWGKLNK 279
MEG K LL +Y G D+ ++++ + E+ P D I + + +
Sbjct: 911 MEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFR 970
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
EE + M K + Y +LL A ++ + + ++M + +
Sbjct: 971 PEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHM 1030
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
++K++ G KA++ LL +++ +P ++ ++M Y G E + + ++
Sbjct: 1031 MMKIYRNAGNHSKAEN-LLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSS 1089
Query: 400 GYVARFKQFQTLVQAYINAKTPAYGIRD--RMRADNVFPN 437
+ T+ AY+ +G M+ D V P+
Sbjct: 1090 SLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPD 1129
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 140/344 (40%), Gaps = 44/344 (12%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILID 170
AEEVF R +G V F N ++ +Y R + A LL M + S+ LI+
Sbjct: 207 AEEVFLRFAGEGATVQVF--NAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLIN 264
Query: 171 IKGQSNDL---TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+ +S L +D + E +S G+ PD T L E A + ++M
Sbjct: 265 ARSKSGCLAAGVALDLLFEVRQS-GLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASE 323
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEEAE 284
+ WT ++ ++ GKA++ R+++ L E D + + A+ K V++ E
Sbjct: 324 CRPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVE 383
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW----DAL 340
+++ K K + Y ++ +Y L L +M GC + + D+L
Sbjct: 384 HTCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSL 443
Query: 341 VKLH--VEGGEVEK------------ADSILL--------KAQQQNKFKPMFSS------ 372
K++ E G+V + A S L+ +A +N F M +S
Sbjct: 444 GKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDR 503
Query: 373 --YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
Y++++D +A+ GD ++ +M Y +Q L+ A
Sbjct: 504 LAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVA 547
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
++Y ++ + G+ +++ + +G PD+ T L + G +K E ++
Sbjct: 329 WTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQ 388
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNK 279
+ K++ T ++ +Y ++G+ D ++ + P I++ GK+N+
Sbjct: 389 LVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNR 448
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
+ EA V + M+ K + ++AL+ YA + ++ M SG LA+
Sbjct: 449 IAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLV 508
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
++ + G+ EK + K N ++P Y +++ AK E++ M
Sbjct: 509 MLDVFARSGDTEKMLCLYRKMMNDN-YRPDDDMYQVLLVALAKEDKCEEIEEVIQDM 564
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 100/271 (36%), Gaps = 35/271 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LM 153
+ LL A N + +V+ + + G N L+++Y R + + LL M
Sbjct: 922 ILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEM 981
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
K + SYK L+ ++ DQ+ E M+S+ + + S ++ K Y + G
Sbjct: 982 GKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNH 1041
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
KAE +L M+ D ++ T +L+ Y G+
Sbjct: 1042 SKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQP------------------------- 1076
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
EAE V + + ++ST Y+ + Y + + G + +M G
Sbjct: 1077 -------REAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPD 1129
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
W ++ + AD+ILL Q+
Sbjct: 1130 HQVWTCFIR--AASLCEQTADAILLLKSLQD 1158
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y L+ + L + + M S C ++A+V +H G+ E+A+ L +
Sbjct: 296 YNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVHGRCGKAEEAER-LFREL 354
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAK 419
+ F P +Y ++ +AK G++ E ++ + G+ + T++ Y +
Sbjct: 355 VEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNEITYNTMIHMYGKMGRL 414
Query: 420 TPAYGIRDRMRADNVFPN 437
A G+ D MRA P+
Sbjct: 415 DLAVGLYDEMRAMGCTPD 432
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 130/326 (39%), Gaps = 22/326 (6%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLT 161
C ++A +F M ++G+ + + N LL Y+R + + A + ++ + +
Sbjct: 332 CARARKPREAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPD 391
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
S+ LI + +V+E MK+ +P+ + L K Y G EKAE +
Sbjct: 392 VMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFH 451
Query: 222 EM--EGDNLKEHRWTCRLLLPLYAELGKADQVARIWK--------LCESNPWLDVCM--A 269
M G E W C LL A + R WK L E LDV
Sbjct: 452 AMLDSGCPPNEVAW-CSLL--------SAYEKGRQWKKVLYTIEKLEELGMKLDVVAWST 502
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A K + E AE FK+M+K+ + Y++L+K Y D + K + + K M G
Sbjct: 503 TISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVG 562
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
P A AL++ + +G E+EK + Q +P +Y I G+
Sbjct: 563 IRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRA 622
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAY 415
K RM G + TL+ Y
Sbjct: 623 VKYIDRMEMAGCTPDSVIYTTLINMY 648
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 101/253 (39%), Gaps = 34/253 (13%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSY 165
N +KAEE+F+ M D G P A LL Y++ + KKV + +E+ +KL ++
Sbjct: 441 GNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAW 500
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I ++ ++ + M G P+ T + L K Y G EKAE++ K M
Sbjct: 501 STTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLR 560
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
++ NP C A + A+GK ++E+
Sbjct: 561 VGIR------------------------------PNP--QACCALLRAYGKGKELEKVII 588
Query: 286 VFKRMSKTWKKLSTKH-YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
F+ M + K+ Y A+ + + +M +GC + + L+ ++
Sbjct: 589 FFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMY 648
Query: 345 VEGGEVEKADSIL 357
G+++KA +L
Sbjct: 649 EANGQIDKAMQVL 661
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 133/339 (39%), Gaps = 15/339 (4%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFS 164
N ++A +VF M++ G + C+ L +KR D A L + N + F+
Sbjct: 242 NFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEA--LRALRAANWPIDTFA 299
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +I L + V M +EGI PD L Y G +A A+ +M
Sbjct: 300 YTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMV 359
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVE 281
+ +K + +L E+G A +V +K +S +LD + ++A KL KVE
Sbjct: 360 SNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 419
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA + M L HYT L+ Y L K++ ++M E G + ++ LV
Sbjct: 420 EAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 479
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
G ++K LL KP +++ I++ G + E + +
Sbjct: 480 GGFSRNG-LKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED--- 535
Query: 402 VARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNK 438
+ + +V Y N AY + R+ + K
Sbjct: 536 -KCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKK 573
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 140/336 (41%), Gaps = 13/336 (3%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVL 150
G LL V KAE+V + G T+ N L+ Y ++ D + +
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ +++ +Y LI+ + +T + +V M+ G++P T L Y +
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-----WKLCESNPWLD 265
G+ EK +L +M+ +K + ++ + + GK + I +K + P
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK--DVAPNAQ 510
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
V + I+A+ + E+A + ++M + S Y LLK + + ++L+ +
Sbjct: 511 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF--KPMFSSYMLIMDQYAKR 383
G ++++ ++ G+ +KA +L Q+ NK+ +P +Y ++ A
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELL---QEMNKYGIRPTLRTYHTLVSALASA 627
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
G +H E ++ +M + +V AY+ +
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 663
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 5/301 (1%)
Query: 122 KGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
KG + ++ C+ LL L K K VL ++ + T Y LI+ Q DL G
Sbjct: 328 KGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRG 387
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+ E MKS I PD T L KAE ++ EME + T L+
Sbjct: 388 AFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLID 447
Query: 241 LYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
Y G+ ++ + + + DV + ++A+ K K+ EA A+ M
Sbjct: 448 AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAP 507
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ + Y +++ Y + + LV++M SG + ++ L+K ++++A+ ++
Sbjct: 508 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 567
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
+ Q +P SY I+ +GD ++ M + G + + TLV A +
Sbjct: 568 YTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALAS 626
Query: 418 A 418
A
Sbjct: 627 A 627
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 4/269 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + K +Y +L+ ++ + +++ M S + PD T +IL G
Sbjct: 255 MLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGE 314
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMA 269
++ E + +TC +LL + G KA+QV + P +
Sbjct: 315 SRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNT 374
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I + ++ + A +F++M + Y AL+ +M++K +DLV +M +SG
Sbjct: 375 LINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSG 434
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
++ L+ + G++EK ++L QQ+ K S+ ++ + K G I
Sbjct: 435 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG-IKSDVISFGSVVKAFCKNGKIPEA 493
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINA 418
I M + + +++ AYI +
Sbjct: 494 VAILDDMIYKDVAPNAQVYNSIIDAYIES 522
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
V Y LL + + +AEE+ ++++G + N ++ + D K ++L
Sbjct: 545 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 604
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K ++ T +Y L+ + + M+ + + M + +EP SS I+ YV
Sbjct: 605 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 664
Query: 213 KEKAEAMLKEME 224
K ++ KEM
Sbjct: 665 DSKVASLKKEMS 676
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 114/279 (40%), Gaps = 18/279 (6%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVV--YRTLLANCVAGNNVKKAEEVFNRMK 120
Y + ++ + KL + KAE + ++ +S V + TL+ ++K V + M+
Sbjct: 407 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 466
Query: 121 DKGF--PVTSFACNQLLILYKRLDKKKVADVLLLMEK---ENVKLTQFSYKILIDIKGQS 175
KG V SF ++ K+ + + +++ ++V Y +ID +S
Sbjct: 467 QKGIKSDVISFGS----VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES 522
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
D +VE MK+ G+ T +L K + ++AE ++ + L+ +
Sbjct: 523 GDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 582
Query: 236 RLLLPLYAELGKADQVARIWKLCESN-----PWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
++ G D+ + + E N P L + A +V + E ++++M
Sbjct: 583 NTIISACCNKGDTDKALELLQ--EMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ S+ Y ++ Y + SK L K+M+E G
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679
>gi|242049534|ref|XP_002462511.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
gi|241925888|gb|EER99032.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
Length = 643
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 163/376 (43%), Gaps = 15/376 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL----ILYKRLDKKKVADV 149
+ + L+ V + +A F +MK G T+ N L+ I+ K + ++V D+
Sbjct: 143 IFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDM 202
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
+ + + ++K +Y IL+ +L VV M++ G+EPD T +A Y +
Sbjct: 203 MGI--EGSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKMRAGGVEPDIVTYNTIASAYAN 260
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR-IWKLCESN--PWLDV 266
+AE ++ E++ ++ T +++ Y + ++ R + ++ ++ P + +
Sbjct: 261 NDETWRAEELIVEIQ-TRVRTSERTWGIIIGGYCRESRLEEALRCVQQMKDAGIVPNVVI 319
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
++ + +N + + M + K Y+ L ++ ++K + +M
Sbjct: 320 FNTLLKGFLDVNDMAAVNNILGLMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMI 379
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
E+G P + L K V + EKA+ +LL+ P ++ ++ + D+
Sbjct: 380 EAGIEPDPQVYSILAKGFVRAKQPEKAEDLLLQMSHLG-VCPNVVTFTTVISGWCSVADM 438
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKALAAQV 444
S +++ +M + G + F+TL+ Y K P A + MR V P ++ +
Sbjct: 439 ESAMRVYEKMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKESTHRLI 498
Query: 445 AQVDAFRKTAVSELLD 460
A DA++ + E ++
Sbjct: 499 A--DAWKAVGLIENIN 512
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 34/254 (13%)
Query: 78 KAESYIQKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI 136
+AE I +I R E + ++ + +++A +MKD G N LL
Sbjct: 266 RAEELIVEIQTRVRTSERTWGIIIGGYCRESRLEEALRCVQQMKDAGIVPNVVIFNTLLK 325
Query: 137 LYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
+ + D V ++L LME+ +K +Y ++ + +V + M GIEP
Sbjct: 326 GFLDVNDMAAVNNILGLMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGIEP 385
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
D +ILAK +V + EKAE +L +M H C
Sbjct: 386 DPQVYSILAKGFVRAKQPEKAEDLLLQM------SHLGVC-------------------- 419
Query: 256 KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
P + I W + +E A V+++M K+ + + + L+ Y++ K
Sbjct: 420 ------PNVVTFTTVISGWCSVADMESAMRVYEKMCKSGVYPNLRTFETLIWGYSEQKQP 473
Query: 316 SKGKDLVKQMAESG 329
K +++++ M E+G
Sbjct: 474 WKAEEVLQMMRETG 487
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
NK +A +VFK + + K S YT LL + +M L+ Q+ +G + +
Sbjct: 86 NKPYQAHSVFKHLMEEGHKPSLVTYTILLTALTNQRMFESIPSLLAQVELAGIRPDSIFF 145
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+AL+ VE + +A + K + + P S++ ++ Y G ++++F M
Sbjct: 146 NALINAFVEAKRMGEAINTFWK-MKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMG 204
Query: 398 QVGYV-ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
G + + LV+A+ + + A+G+ +MRA V P+
Sbjct: 205 IEGSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKMRAGGVEPD 247
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 143/352 (40%), Gaps = 7/352 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V + +LL G+ + A +F+RM + G+ N ++ L K D+L
Sbjct: 152 VTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME + ++ +Y LI S ++V M I PD T L V GR
Sbjct: 212 MEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLL---LPLYAELGKADQVARIWKLCESNPWLDVCMA 269
+AE + +EM +L T LL L +Y+ L +A+Q+ P +
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSI 331
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I + K KVE +F MS+ +T YT L++ Y L+ +++ K M G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCG 391
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ L+ + G++EKA ++L Q++ +Y +I+ K G++
Sbjct: 392 VPPNIITYNVLLHGLCDNGKIEKA-LVILADMQKSGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNKA 439
++ + G + ++ + A + +M+ D + PN+
Sbjct: 451 WDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNEC 502
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 137/338 (40%), Gaps = 5/338 (1%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLL 151
+V + +L+ NV A ++ + M +KGF + N L+ +L + +K ++L
Sbjct: 263 QVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQ 322
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M +Y LI + N++ + + S+G+ PD T L +
Sbjct: 323 QMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSK 382
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD---VCM 268
++ A M +EM+ K +T +L+ + + + K ES+ V
Sbjct: 383 NQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYN 442
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ K ++E+AE +F +M S+ Y L+ +K + + L+ QM
Sbjct: 443 TLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIME 502
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G +++L+ G++EKA I ++ N +P +Y ++ + G +
Sbjct: 503 GLKPDKFTYNSLLTYFCRVGDIEKAGDI-VQTMASNGCEPDIFTYGTLIGGLCRAGRVDV 561
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
K+ ++ G V + ++QA K G+R
Sbjct: 562 ASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 60 ERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFN 117
E Y+ +D + R L++A ++++ S R VVY TL+ ++ AEE+F+
Sbjct: 403 EFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFD 462
Query: 118 RMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK---ENVKLTQFSYKILIDIKGQ 174
+M+ G +S N L + K+V + LM++ E +K +F+Y L+ +
Sbjct: 463 QMELLGVSRSSVTYNTL--IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCR 520
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK--EMEGDNLKEHR 232
D+ +V+ M S G EPD T L GR + A +L+ +M+G L H
Sbjct: 521 VGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHA 580
Query: 233 W 233
+
Sbjct: 581 Y 581
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 105/264 (39%), Gaps = 9/264 (3%)
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
T F Y I ++ + N L ++ + M +EGI D ST +L K + A ML
Sbjct: 123 TNF-YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILML 181
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA---IEAWGKL 277
+EM LK T L+ + E G + ++ K L ++ + + K
Sbjct: 182 EEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKE 241
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
+VEEA +S+ + +L+ + ++ D+V M E G +
Sbjct: 242 GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTY 301
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQ--NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
++L+ + GE EKA IL QQ + P +Y ++ K +I + +
Sbjct: 302 NSLISGMCKLGEFEKAIEIL---QQMILRECSPNTVTYNTLISALCKENEIEAATDLARI 358
Query: 396 MRQVGYVARFKQFQTLVQAYINAK 419
+ G + F TL+Q +K
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSK 382
>gi|242091740|ref|XP_002436360.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
gi|241914583|gb|EER87727.1| hypothetical protein SORBIDRAFT_10g001070 [Sorghum bicolor]
Length = 999
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 162/410 (39%), Gaps = 64/410 (15%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKK 144
+PE E Y L++ ++A +F MK +G +++ C LL LY K D
Sbjct: 311 VPE----EATYSLLISASSRHGKGEQALRLFEEMKAQGIVPSNYTCASLLALYYKNEDYS 366
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K +L ME V + Y ILI I G+ +Q E ++ G+ D T +A
Sbjct: 367 KALSLLSEMENSKVIPDEVIYGILIRIYGKLGLYEEAEQTFEKIEKAGLLSDEQTYVAMA 426
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWT------------------------------ 234
+ +++ G ++A +L+ M N+K ++
Sbjct: 427 QVHLNAGDYDRALEVLESMMMRNVKPSHFSYSAILRCYVAKEDIVAAEDTFRALSQHGLP 486
Query: 235 ----CRLLLPLYAELGKADQV-ARIWKLCESNPWL--DVCMAAIEAWGKLNKVEEAEAVF 287
C LL LY LG ++ A + K+ E + L D+ M ++ + K N + +AE +F
Sbjct: 487 DVFCCNDLLRLYMRLGHLEKARALVLKMREDDFRLDEDLSMTVMKFYCKSNMINDAEKIF 546
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
K + + K + L+++YA +K ++++ H A D
Sbjct: 547 KDIQRNNKTVKIPTMLLLIEMYAR----NKSSVILRE------HSSSKALD--------- 587
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G A S+ LK+ SS L++ + A+ G + I+ ++ ++G+
Sbjct: 588 GTDSSAASVALKSLLD--MPGGLSSVSLLISKLAREGSTDEAKFIYDQLTELGFKPDHTA 645
Query: 408 FQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
TLV Y K A +FP A A VDAF K +E
Sbjct: 646 IATLVVQYGQGKQLEQAQELFESASALFPEGANVYN-AMVDAFCKCGKTE 694
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 139/337 (41%), Gaps = 14/337 (4%)
Query: 74 RGLQKAESYI--QKIPESFRGEVVYRTLLANCVAG-NNVKKAEEVFNRMKDKGFPVTSFA 130
RG ++A + K+ + VV T+L +K AEE F M G + A
Sbjct: 152 RGWRQARDFFAWMKLQLCYEPSVVAYTILLRLYGKVGKIKLAEETFLEMLQVGCEPDAVA 211
Query: 131 CNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSNDLTG-MDQVVE 186
C LL +Y R + K D++L + + ++ Y +I Q L G + V +
Sbjct: 212 CGTLLCMYARWGRHK--DMMLFYSAVRRRDLVPPVSVYNYMIS-SLQKQKLHGKVIHVWK 268
Query: 187 AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
M+ G P+ T ++ +V EKA + EM T LL+ + G
Sbjct: 269 QMREAGALPNQFTYTVVISSFVKEDLLEKAMDVFGEMRQCRFVPEEATYSLLISASSRHG 328
Query: 247 KADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
K +Q R+++ ++ P C + + + K +A ++ M + Y
Sbjct: 329 KGEQALRLFEEMKAQGIVPSNYTCASLLALYYKNEDYSKALSLLSEMENSKVIPDEVIYG 388
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
L+++Y + + + +++ ++G + A+ ++H+ G+ ++A +L +
Sbjct: 389 ILIRIYGKLGLYEEAEQTFEKIEKAGLLSDEQTYVAMAQVHLNAGDYDRALEVLESMMMR 448
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
N KP SY I+ Y + DI + E F + Q G
Sbjct: 449 N-VKPSHFSYSAILRCYVAKEDIVAAEDTFRALSQHG 484
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/411 (19%), Positives = 147/411 (35%), Gaps = 88/411 (21%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-ME 154
Y +L VA ++ AE+ F + G P F CN LL LY RL + A L+L M
Sbjct: 457 YSAILRCYVAKEDIVAAEDTFRALSQHGLP-DVFCCNDLLRLYMRLGHLEKARALVLKMR 515
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY------- 207
+++ +L + ++ +SN + +++ + ++ T +L + Y
Sbjct: 516 EDDFRLDEDLSMTVMKFYCKSNMINDAEKIFKDIQRNNKTVKIPTMLLLIEMYARNKSSV 575
Query: 208 ----------VSGGRKEKAEAMLKEM-------------------EG---------DNLK 229
+ G A LK + EG D L
Sbjct: 576 ILREHSSSKALDGTDSSAASVALKSLLDMPGGLSSVSLLISKLAREGSTDEAKFIYDQLT 635
Query: 230 E--HRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-----DVCMAAIEAWGKLNKVEE 282
E + + L + G+ Q+ + +L ES L +V A ++A+ K K E+
Sbjct: 636 ELGFKPDHTAIATLVVQYGQGKQLEQAQELFESASALFPEGANVYNAMVDAFCKCGKTED 695
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A +F M + L+ H L + +M SG ++ ++
Sbjct: 696 AYHLFMEMVDQGSNRDAVTVSILVTHLTKHGKLHSAISIYDRMISSGTSQSMQTFNLMIS 755
Query: 343 LHVEGGEVEKA----------------------------------DSILLKAQQQNKFKP 368
+ +GG+++KA S++ K +++ +P
Sbjct: 756 VFGKGGKLDKAVEMFAAAQELGLPIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRP 815
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
S+ +++ YA G + FH M+ G+ + L++AY AK
Sbjct: 816 GKISFNSMINAYATSGLCSEAKSTFHEMQDCGHAPDSFSYLALIRAYTEAK 866
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 114/294 (38%), Gaps = 11/294 (3%)
Query: 80 ESYIQKIPESFRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-L 137
ES PE G VY ++ A C G + A +F M D+G + + L+ L
Sbjct: 667 ESASALFPE---GANVYNAMVDAFCKCGKT-EDAYHLFMEMVDQGSNRDAVTVSILVTHL 722
Query: 138 YKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
K + M + ++ ++I + G+ L ++ A + G+ D
Sbjct: 723 TKHGKLHSAISIYDRMISSGTSQSMQTFNLMISVFGKGGKLDKAVEMFAAAQELGLPIDE 782
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-- 255
+ Y GR ++A M K M+ D ++ + + ++ YA G + +
Sbjct: 783 KMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRPGKISFNSMINAYATSGLCSEAKSTFHE 842
Query: 256 -KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
+ C P +A I A+ + EAE + M + S H++ L+ +
Sbjct: 843 MQDCGHAPDSFSYLALIRAYTEAKLYMEAEEAIRMMLNSSTTPSCPHFSHLIFAFLKEGQ 902
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ + + + QM E+ ++++++E G ++ + I L + KP
Sbjct: 903 IGEAQRIYNQMKEASVAPDLACCRTMMRVYMEHGLMD--EGITLYETTRGSLKP 954
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 63/357 (17%), Positives = 130/357 (36%), Gaps = 47/357 (13%)
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL------LL 152
L++ + +A+ +++++ + GF A L++ Y + + + A L L
Sbjct: 614 LISKLAREGSTDEAKFIYDQLTELGFKPDHTAIATLVVQYGQGKQLEQAQELFESASALF 673
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
E NV Y ++D + + M +G D+ T +IL H G+
Sbjct: 674 PEGANV------YNAMVDAFCKCGKTEDAYHLFMEMVDQGSNRDAVTVSILVTHLTKHGK 727
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
A ++ M + T L++ ++ + GK D+ ++ AA +
Sbjct: 728 LHSAISIYDRMISSGTSQSMQTFNLMISVFGKGGKLDKAVEMF-------------AAAQ 774
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
G + K YT +L +Y + + K+M E G
Sbjct: 775 ELGL-------------------PIDEKMYTNMLSLYGKAGRHQEASLMFKRMKEDGIRP 815
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
G +++++++ + G +A S + Q F SY+ ++ Y + E+
Sbjct: 816 GKISFNSMINAYATSGLCSEAKSTFHEMQDCGHAPDSF-SYLALIRAYTEAKLYMEAEEA 874
Query: 393 FHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQV 447
M F L+ A++ A I ++M+ +V P+ A + +V
Sbjct: 875 IRMMLNSSTTPSCPHFSHLIFAFLKEGQIGEAQRIYNQMKEASVAPDLACCRTMMRV 931
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 150/351 (42%), Gaps = 9/351 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
+ TL+ +KKA +++ +GF + + L+ L K + K VA +L
Sbjct: 134 ITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRK 193
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+E +VK Y +I ++ L + M +GI P+ T L + G
Sbjct: 194 LEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGH 253
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ----VARIWKLCESNPWLDVCM 268
++A ++L EM+ N+ T L+ + GK +A + K C P +
Sbjct: 254 LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKAC-IKPDVVTYN 312
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ I+ + LNKV+ A+ VF M+++ + + YT ++ KM+ + L ++M
Sbjct: 313 SLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYK 372
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ + +L+ + +E+A ++ K ++Q +P SY +++D K G + +
Sbjct: 373 NMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQG-IQPDVYSYTILLDALCKGGRLEN 431
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
++ F R+ GY + + ++ A A ++ +M P+
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPD 482
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 151/391 (38%), Gaps = 38/391 (9%)
Query: 94 VVYRTLLAN-CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL- 151
V Y L+ C+ G+ +K+A + N MK K N L+ + K K A ++L
Sbjct: 239 VTYNALVYGFCIMGH-LKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLA 297
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+M K +K +Y LID N + V +M G+ P+ T +
Sbjct: 298 VMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEK 357
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES------NPWLD 265
++A ++ +EM+ N+ T L L K + R LC+ P +
Sbjct: 358 MVDEAMSLFEEMKYKNMIPDIVT---YTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY 414
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
++A K ++E A+ F+R+ L+ + Y ++ + + DL +M
Sbjct: 415 SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSIL----------------------LKAQQQ 363
GC + + ++ E E +KA+ IL L +
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTK 534
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--P 421
KP +Y +MD Y ++ + +F+ M Q+G + + ++ KT
Sbjct: 535 ACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594
Query: 422 AYGIRDRMRADNVFPNKALAAQVAQVDAFRK 452
A + + M+ N+FPN + + +DA K
Sbjct: 595 AMSLFEEMKHKNMFPN--IVTYTSLIDALCK 623
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 160/368 (43%), Gaps = 37/368 (10%)
Query: 61 RDYASCLDLIAKLRGLQKAES------YIQKIPESFRGEVVYRTLLANCVAGNNVKKAEE 114
R Y + +D + K + + +A S Y IP+ V Y +L+ +++++A
Sbjct: 344 RTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDI----VTYTSLIDGLCKNHHLERAIA 399
Query: 115 VFNRMKDKGFPVTSFACNQLL-ILYK--RLDKKKVADVLLLMEKENVKLTQFSYKILI-- 169
+ +MK++G ++ LL L K RL+ K LL++ ++ + +Y ++I
Sbjct: 400 LCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQ--TYNVMING 457
Query: 170 ----DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
D+ G++ DL M+ +G PD+ T + +KAE +L+EM
Sbjct: 458 LCKADLFGEAMDLK------SKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIA 511
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEA 285
L+E R L +A V + P + ++ + +N+++ A+
Sbjct: 512 RGLQEARK---------VRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKY 562
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
VF M++ + + YT ++ K + + L ++M + + +L+
Sbjct: 563 VFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALC 622
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
+ +E+A + LLK +++ +P SY +++D K G + ++IF R+ GY
Sbjct: 623 KNHHLERAIA-LLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNV 681
Query: 406 KQFQTLVQ 413
+ + ++
Sbjct: 682 QVYTAMIN 689
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 5/221 (2%)
Query: 140 RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
RL + K+ VL +M K +K +Y L+D N+L V +M G+ P+
Sbjct: 521 RLKEAKI--VLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQC 578
Query: 200 QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ-VARIWKLC 258
I+ ++A ++ +EM+ N+ + T L+ + ++ +A + ++
Sbjct: 579 YTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMK 638
Query: 259 ESNPWLDVCMAAI--EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
E DV I + K ++E A+ +F+R+ L+ + YTA++ +
Sbjct: 639 EHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFD 698
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ DL +M + GC + +D ++ E E +KA+ IL
Sbjct: 699 EALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKIL 739
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 134/314 (42%), Gaps = 39/314 (12%)
Query: 89 SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD 148
S + V Y T++ NV+KA+E+F++M+ G S+ N ++ Y AD
Sbjct: 108 SVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISW--NSMISGY--------AD 157
Query: 149 VLLLMEKENVKLTQFSY-----------KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
LL + E++K Q ++ +LI N L + +++ MK +G EP+
Sbjct: 158 NLL--KCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNV 215
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL-----GKADQVA 252
T + +V G E A + EM+ +L+ +T ++LP A L GK
Sbjct: 216 YTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAH 275
Query: 253 RIWKLCESNPWLDVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
I + E LDV + A ++ + K ++ A V+ R+S L +++ A+L YA
Sbjct: 276 SIRQGYE----LDVHIGAALVDMYAKCGSIKHAMQVYNRISN--PNLVSQN--AMLTAYA 327
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
H +G L + M +G + + +++ V G VE N P
Sbjct: 328 MHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYN-VTPSL 386
Query: 371 SSYMLIMDQYAKRG 384
Y I+D ++ G
Sbjct: 387 KHYTCIVDLLSRAG 400
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/403 (18%), Positives = 161/403 (39%), Gaps = 8/403 (1%)
Query: 18 EGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQ 77
EG S + M L RR G + L E +ET I Y C+ ++ + +
Sbjct: 221 EGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNI-YTYTICIRVLGRAGRID 279
Query: 78 KAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL 135
A ++ + + G V Y L+ A + KA+E++ +M+ L+
Sbjct: 280 DAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLM 339
Query: 136 ILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE 194
+ D + V ME + +Y IL++ +S + +++ M+ GI
Sbjct: 340 SKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIV 399
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
P+ T L ++ R ++A + ME + ++ L + Y +LG ++
Sbjct: 400 PNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDT 459
Query: 255 WKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
++ + P + C A++ + ++ ++ EA+ +F + + Y ++K Y+
Sbjct: 460 FEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSK 519
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
+ K L+ +M GC + ++L+ + G V++A + + + K P
Sbjct: 520 AGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDL-KLAPTVV 578
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+Y +++ K G + +F M++ G F L+
Sbjct: 579 TYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDC 621
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 136/315 (43%), Gaps = 9/315 (2%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
K+A +V+ RM +G + + L++ L +R D + D+L ME ++ ++Y I
Sbjct: 209 KEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTIC 268
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I + G++ + +++ M+ EG PD T +L + G+ +KA+ + +M +
Sbjct: 269 IRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH 328
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAI--EAWGKLNKVEEAEA 285
K T L+ + G + V R W E++ + DV I EA K KV++A
Sbjct: 329 KPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFD 388
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+ M + Y L+ + + L + +L M G + P A+ ++ +
Sbjct: 389 MLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLG--VAPTAYSYVLFIDY 446
Query: 346 EG--GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
G G+ EKA K +++ P ++ + A+ G I + IF+ + G
Sbjct: 447 YGKLGDPEKALDTFEKMKKRG-IMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSP 505
Query: 404 RFKQFQTLVQAYINA 418
+ +++ Y A
Sbjct: 506 DSVTYNMMMKCYSKA 520
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/289 (18%), Positives = 116/289 (40%), Gaps = 6/289 (2%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
F+Y +L+D G+S + + ++ M G +P+ T I+ V KA + E
Sbjct: 824 FTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYE 883
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC---ESNPWLDVCMAAIEAWGKLNK 279
+ + T L+ + G++++ +I++ + P + I +GK
Sbjct: 884 IISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGN 943
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
V A +FKRM K + K YT L++ + +++ +G ++++
Sbjct: 944 VNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNL 1003
Query: 340 LVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
++ + +E+A S L + P +Y ++ + G + K+F ++ +
Sbjct: 1004 MINGLGKSRRLEEALS-LFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFM 1062
Query: 400 GYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNKALAAQVAQ 446
G + L++ + + K A+ + +M PN AQ+
Sbjct: 1063 GLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 116/315 (36%), Gaps = 45/315 (14%)
Query: 58 FIERDYASCLDLIAKLRGLQKAESYIQKIPESF--------RGE----VVYRTLLANCVA 105
F+E A C I L A ++I E F RG + + +++ V
Sbjct: 811 FVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVK 870
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFS 164
N++ KA +++ + F T L+ L K ++ + M K
Sbjct: 871 SNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAI 930
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y ILI+ G++ ++ + + M EGI PD + IL + GR + A +E++
Sbjct: 931 YNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELK 990
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAE 284
L + L+ I GK ++EEA
Sbjct: 991 LTGLDPDTVSYNLM--------------------------------INGLGKSRRLEEAL 1018
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
++F M Y AL+ + + M+ + + +++ G ++AL++ H
Sbjct: 1019 SLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGH 1078
Query: 345 VEGGEVEKADSILLK 359
+ G ++A S+ K
Sbjct: 1079 SKSGNKDRAFSVFKK 1093
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALILNAY 400
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/376 (19%), Positives = 152/376 (40%), Gaps = 41/376 (10%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLL 100
AL W E + + + + ++ + K+R + + + ++ + G+ + +
Sbjct: 103 ALSFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLLNGDT-FSLIA 161
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYK-RLDKKKVADVLLLMEKENV 158
V +K+A + F RM+ G N+L+ +L K + +K ++ M + N+
Sbjct: 162 RRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNL 221
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
+ SY ILI+ Q +L +D+V MK +G +PD T I+ Y + ++A
Sbjct: 222 EPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIG 281
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
+ +M N+ NP + I G +
Sbjct: 282 IYHDMLSKNV--------------------------------NPSPHIYCTFITGLGNGS 309
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA-- 336
+++EA F++ + Y A++ Y + +V +M E G IGP A
Sbjct: 310 RMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELG--IGPNART 367
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+D ++ ++GG ++A S+ + + +P S+Y +++ + + +++ M
Sbjct: 368 YDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEM 427
Query: 397 RQVGYVARFKQFQTLV 412
+ G + F TL+
Sbjct: 428 KDKGILPGIHMFSTLI 443
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 123/277 (44%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 38 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKL 97
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A A++ EM+ + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 98 FREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNI 157
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 158 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 217
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 218 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 276
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A A+ R
Sbjct: 277 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 313
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 82/438 (18%), Positives = 178/438 (40%), Gaps = 63/438 (14%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL
Sbjct: 9 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLC---- 61
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
DY+ + + ++L K ++ + V Y ++ ++A + + MK
Sbjct: 62 DYSKAISIFSRL----KRSGFMPDL-------VAYNAMINVFGKAKLFREARALISEMKT 110
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVK--LTQFSYKILIDIKGQSNDLT 179
G + + + LL +Y +KK + + + E +K L + I+ID+ GQ
Sbjct: 111 AGVMPNTASYSTLLTMYVE-NKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 169
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
D++ M+ GIEP+ + L + Y +A + + M+ N++++ T ++
Sbjct: 170 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 229
Query: 240 PLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+Y E KA+ + + + P I WGK+ K++ A +F+++ + +
Sbjct: 230 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 289
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ Y ++ Y +++ K L+ ++ + D + + G +E+A +
Sbjct: 290 IDQVLYQTMIVAYERAGLVAHAKRLLHELKSPD----NIPRDTAIHILAGAGRIEEATYV 345
Query: 357 LLKAQQQNKFKP---------MFSSY-------------------------MLIMDQYAK 382
+A + K +FS Y L+++ Y K
Sbjct: 346 FRQAIDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGK 405
Query: 383 RGDIHSTEKIFHRMRQVG 400
++ ++ M++VG
Sbjct: 406 LHELDKANDVYMEMQEVG 423
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 DEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL 53
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
IE KL +A ++F R+ ++ Y A+
Sbjct: 54 -------------------------IELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAM 88
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 INVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKC 148
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 201
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/455 (20%), Positives = 180/455 (39%), Gaps = 68/455 (14%)
Query: 41 GKALQLSEWL-ETNKKLDFIER-DYASCLDLIAKLRGLQKAESYIQKIP-ESFRGEV-VY 96
GKA W E +KL + Y S + + + +AE+ ++++ + + +Y
Sbjct: 358 GKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIY 417
Query: 97 RTLLANCVAGNNVKKAEEVFNRMKDKGFP--VTSFACNQLLILYKRLDK-KKVADVLLLM 153
T++ N +K VF+R+K+ GF V S+ C L+ LY ++ K K + +M
Sbjct: 418 HTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGC--LINLYTKIGKVSKALQISKMM 475
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ +K +Y +LI+ + D V E +G++PD + +
Sbjct: 476 KMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNM 535
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV-----CM 268
++A M+K+M+ + +R T R LP+ +A ++ R ++ D+ C+
Sbjct: 536 DRAICMVKQMQKE---RYRPTTRTFLPIIHGFARAGEMRRALEI------FDMMRRSGCI 586
Query: 269 AAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
+ + L K+ +A A+ +M+ + YT L++ YA K
Sbjct: 587 PTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQY 646
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ G I ++AL+K + G ++ A ++ + +N + F Y +++D +A
Sbjct: 647 FSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFV-YNILIDGWA 705
Query: 382 KRGDI-----------------------------------HSTEKIFHRMRQVGYVARFK 406
+RGD+ +I M G K
Sbjct: 706 RRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLK 765
Query: 407 QFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKA 439
+ TL+ + A P A + M+ + P+KA
Sbjct: 766 TYTTLINGWARASMPEKALSCFEEMKLAELKPDKA 800
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/346 (17%), Positives = 147/346 (42%), Gaps = 7/346 (2%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYK-RLDKKKVADVLLLMEKENVKLTQFSY 165
++ A + F M+ +G +S + L+ Y D ++ + M++E +++T +Y
Sbjct: 288 GDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTY 347
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I++ + D + K + ++ T + + ++AEA+++EME
Sbjct: 348 SIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEV 407
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ ++ Y +G ++ ++ K C +P + I + K+ KV +
Sbjct: 408 QGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSK 467
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A + K M + K + K Y+ L+ + K + + + + G + ++ ++
Sbjct: 468 ALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIIT 527
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+++A ++K Q+ +++P +++ I+ +A+ G++ +IF MR+ G +
Sbjct: 528 AFCGMSNMDRA-ICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCI 586
Query: 403 ARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQ 446
+ L+ + + A I D+M V PN+ + Q
Sbjct: 587 PTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQ 632
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 110/278 (39%), Gaps = 35/278 (12%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +++ + D+ Q E+M++ GIEP S + L Y G E+A +++M+
Sbjct: 277 YGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMK 336
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAE 284
+ ++ T +++ +A++GKAD A + W
Sbjct: 337 EEGIEMTIVTYSIIVGGFAKMGKAD--------------------AADHW---------- 366
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
FK + L+ Y +++ + + + + LV++M G + ++ +
Sbjct: 367 --FKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGY 424
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
G EK I+ ++ F P SY +++ Y K G + +I M+ G
Sbjct: 425 TMIGNEEKC-LIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHN 483
Query: 405 FKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKAL 440
K + L+ ++ K A+ + + D + P+ L
Sbjct: 484 MKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVL 521
>gi|15230719|ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2750; Flags: Precursor
gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein [Arabidopsis thaliana]
gi|20466300|gb|AAM20467.1| unknown protein [Arabidopsis thaliana]
gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis thaliana]
gi|332640870|gb|AEE74391.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 149/359 (41%), Gaps = 15/359 (4%)
Query: 68 DLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
DLIAK + LQ E + ++F E Y LL +A+++F+ M ++G
Sbjct: 97 DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEK----ENVKLTQFSYKILIDIKGQSNDLTGM 181
T LL Y R + D +++K + F+Y L+ ++ +
Sbjct: 157 PTVELYTALLAAYTR--SNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLP 240
D + + M I P++ TQ I+ Y GR ++ E +L +M K WT ++L
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 274
Query: 241 LYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
++ +GK D + ++ + P I ++GK ++ +V + M K
Sbjct: 275 VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPW 334
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA-DSI 356
+T Y +++ +AD + QM G + L+ + G K S+
Sbjct: 335 TTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSV 394
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L A+ + F Y ++ AK D+ E+++ RM++ V + F+ +V+AY
Sbjct: 395 QLAAKFEIPENTAF--YNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAY 451
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 147/357 (41%), Gaps = 59/357 (16%)
Query: 72 KLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF--PVTSF 129
KL KA ++ + E+ L++ +A +A EVF+ ++++ F P
Sbjct: 77 KLDRRSKANGWVNTVTET----------LSDLIAKKQWLQALEVFDMLREQTFYQPKEGT 126
Query: 130 ACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMK 189
L++L K + + M +E ++ T Y L+ +SN + +++ MK
Sbjct: 127 YMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMK 186
Query: 190 S-EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
S +PD T + L K V + + +++ KEM+ + + T ++L Y +G+
Sbjct: 187 SFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRF 246
Query: 249 DQVARIWK------LCESNPW-LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
DQ+ ++ C+ + W +++ ++ +G + K++ E+ +++ + T+
Sbjct: 247 DQMEKVLSDMLVSTACKPDVWTMNIILSV---FGNMGKIDMMESWYEKFRNFGIEPETRT 303
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
+ L+ Y +M K +++ M
Sbjct: 304 FNILIGSYGKKRMYDKMSSVMEYM------------------------------------ 327
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
++ +F S+Y I++ +A GD + E F +MR G A K F L+ Y NA
Sbjct: 328 RKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANA 384
>gi|255661178|gb|ACU25758.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 352
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSXKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSXKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF M+
Sbjct: 82 YNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMR 141
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 201
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 240 PLYAELGKADQVARIWKLCESN 261
++ ++GK D+ A +++ S+
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSS 283
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + + + LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 EIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKR 289
F++
Sbjct: 343 FRQ 345
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 130/326 (39%), Gaps = 47/326 (14%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
++Y T++ N +++AE VF MK KG TS + N L+ Y R + ++ + LL+
Sbjct: 365 IMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYSRRMQPEIVEKLLVE 424
Query: 154 EKE-----NVKLTQFSYKILIDIKGQSNDLTGM--DQVVEAMKSEGIEPDSSTQAILAKH 206
K+ NVK SY LI G+ ++ M D + MK GI P S + L
Sbjct: 425 MKDMGLEPNVK----SYTCLISAYGRQKKMSDMAADAFLR-MKKNGIRPTSHSYTALIHA 479
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV 266
Y G EKA + + M + LK T LL + G + +IWKL
Sbjct: 480 YSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIWKLM-------- 531
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK-HYTALLKVYADHKMLSKGKDLVKQM 325
+ E K L T+ + LL +A H + +D++ +
Sbjct: 532 -------------IRE------------KVLGTRVTFNTLLDGFAKHGHYVEARDVISEF 566
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ G + ++ L+ + GG+ K LL+ KP +Y ++ + + D
Sbjct: 567 DKIGLQPTVMTYNMLMNAYARGGQHLKLPQ-LLQEMAARDLKPDSVTYSTMIYAFVRVRD 625
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTL 411
+M + G V K +Q L
Sbjct: 626 FKRAFFYHKKMVKSGQVPDVKSYQKL 651
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 173/433 (39%), Gaps = 56/433 (12%)
Query: 30 AMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES 89
A++ L + Y A ++ E +ETN + D+ +C +I +R +
Sbjct: 264 AISGLMVCKRYDDACKVYEAMETNN----VNPDHVTCSIMITVMRKI------------- 306
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
G + K + + F +M KG +S L+ + K A +
Sbjct: 307 ----------------GRSAKDSWDYFEKMNQKGVKWSSEVLGALIKSFCDEGLKSQALI 350
Query: 150 LLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
L L MEK+ V Y ++D +SN + + V MKS+G++P S++ IL Y
Sbjct: 351 LQLEMEKKGVASNVIMYNTIMDAFSKSNQIEEAEGVFAEMKSKGVKPTSASFNILMNAYS 410
Query: 209 SGGRKEKAEAMLKEMEGDNLKEH--RWTCRLLLPLYAELGK-ADQVARIWKLCESN---P 262
+ E E +L EM+ L+ + +TC L+ Y K +D A + + N P
Sbjct: 411 RRMQPEIVEKLLVEMKDMGLEPNVKSYTC--LISAYGRQKKMSDMAADAFLRMKKNGIRP 468
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY---ADHKMLSKGK 319
A I A+ E+A + F+ M + K S + YT LL + D L K
Sbjct: 469 TSHSYTALIHAYSVSGWHEKAYSAFENMLREGLKPSIETYTTLLDAFRRAGDTVSLMKIW 528
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
L+ + G + ++ L+ + G +A ++ + + +P +Y ++M+
Sbjct: 529 KLMIREKVLGTRV---TFNTLLDGFAKHGHYVEARDVISEFDKIG-LQPTVMTYNMLMNA 584
Query: 380 YAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKA 439
YA+ G ++ M + T++ A++ +RD RA
Sbjct: 585 YARGGQHLKLPQLLQEMAARDLKPDSVTYSTMIYAFVR-------VRDFKRAFFYHKKMV 637
Query: 440 LAAQVAQVDAFRK 452
+ QV V +++K
Sbjct: 638 KSGQVPDVKSYQK 650
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 170/424 (40%), Gaps = 46/424 (10%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLA 101
AL + +W E K +Y + ++ + K++ + + + + + + + +
Sbjct: 113 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQKKLLSKDTFALISR 172
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKL 160
VK+A F++M+D GF + S N++L IL K + V M+K+ +
Sbjct: 173 RYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEP 232
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY IL++ GQ +L +++V MK EG EPD I+ Y + ++A
Sbjct: 233 DIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFF 292
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
EME N C+ +P + + I G K+
Sbjct: 293 NEMEQRN------------------------------CKPSP--HIFCSLINGLGSEKKL 320
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA--WD 338
+A F+R + L Y AL+ Y + + V +M G IGP A +D
Sbjct: 321 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKG--IGPNARTYD 378
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + ++A + Q+ +P S+Y +++ + + + KI+ M+
Sbjct: 379 IILHHLIRMQRTKEAYEVY----QKMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKG 434
Query: 399 VGYVARFKQFQTLVQA--YINAKTPAYGIRDRMRADNVFPNKALAAQVAQ--VDAFRKTA 454
G + F +L+ A + N A + M + P L +++ Q +D RK
Sbjct: 435 KGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDK 494
Query: 455 VSEL 458
V++L
Sbjct: 495 VADL 498
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 145/330 (43%), Gaps = 10/330 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--ILYKRLDKKKVADVLLL 152
+Y L++ ++ A +F++M++ G + N L+ L+ R K +A L
Sbjct: 13 IYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGY 72
Query: 153 MEK----ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
EK E + T +Y IL+ Q+ D +D + + + + PD T + Y
Sbjct: 73 FEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYG 132
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LCESNPWLD 265
G ++ E++L M+ + T +L+ Y D++ +++K + P
Sbjct: 133 KNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHP 192
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ I +G+ E+AE+V ++M + K + L+ +YA +SK + + ++
Sbjct: 193 TFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQVFDEL 252
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
S + + +++++ + G +AD +L A QQ P S+Y L+ Y K D
Sbjct: 253 VTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDTALQQCVV-PNGSTYKLLYKAYTKAND 311
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+K+ RM + G V K F ++A+
Sbjct: 312 KLLVQKLLKRMNKQGIVPNKKFFLDALEAF 341
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 6/155 (3%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADH----KMLSKGKDLVKQM- 325
I G+ ++ A +F +M + K T Y +L+ + K L+K ++M
Sbjct: 18 ISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMK 77
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
C + ++ L++ + G+ ++ D +L K ++ P +Y ++D Y K G
Sbjct: 78 CIERCQPTIVTYNILLRAFAQAGDTKQVD-MLFKDLDESVVSPDVYTYNGVLDAYGKNGM 136
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
I E + RM+ F L+ +Y +T
Sbjct: 137 IKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQT 171
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 144/367 (39%), Gaps = 17/367 (4%)
Query: 82 YIQKIPESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR 140
Y Q + E + V Y T++ ++ A F +++ G + ++ CN LL+ Y R
Sbjct: 171 YSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCR 230
Query: 141 L-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
D +K +L++M + ++SY ILI ++ + ++ M +G P+ T
Sbjct: 231 TGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHT 290
Query: 200 QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-- 257
+L + GR A +L EM + WT ++ Y + G+ I L
Sbjct: 291 YTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLME 350
Query: 258 ---CESNPWLDVCMAAIEAWGKLNKVEEA--EAVFKRMSKTWKKLSTKHYTALLKVYADH 312
C + W + GK ++ EE A+ + S T +T ++ Y
Sbjct: 351 GNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPT-----VITFTNIINGYCKA 405
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
+ + + M S C + A+ L+ + ++ +++A L N P
Sbjct: 406 EKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT-LNEIFANGLSPNVVI 464
Query: 373 YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMR 430
Y I+D Y K G + + ++F G + +L+ I + A + +M+
Sbjct: 465 YTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQ 524
Query: 431 ADNVFPN 437
D + P
Sbjct: 525 EDGITPG 531
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 19/218 (8%)
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
K + +Y + I + + ++ M+ G+ PD T + G + A +
Sbjct: 701 KPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFS 760
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKAD-------------QVARIWKLCES----- 260
LK M + + + WT LLL + ++ A+ ++ +W+L E
Sbjct: 761 TLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHG 820
Query: 261 -NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
NP + I + K ++EEA + M + + YT L+K D K+ K
Sbjct: 821 LNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAA 880
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
V M E G ++ L+ + G+ +KA ++
Sbjct: 881 SFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALF 918
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 107/267 (40%), Gaps = 9/267 (3%)
Query: 76 LQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
L KA + I K+ E G + Y TL+ + A +F M+ G A N
Sbjct: 513 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 572
Query: 134 LLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
L + + + A L+ K+ V LT+ +Y L+D ++ + ++E M +EG
Sbjct: 573 LTDALCKSGRAEEAYSFLV--KKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGC 630
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR 253
+ DS T ++L + + +A ++L +M +K + +++ + GK D
Sbjct: 631 KADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKS 690
Query: 254 IWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
++ S+ P I ++ K+ ++EEA + M + Y +
Sbjct: 691 MFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCG 750
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAW 337
+ +K+M ++ C P W
Sbjct: 751 HMGYMDCAFSTLKRMIDASCE--PNYW 775
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 126/317 (39%), Gaps = 10/317 (3%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLL--------ILYKRLDKKKVADVLLLMEKENV 158
N KAE++ + ++ K ++S C L +L K+ K+ D L + +
Sbjct: 400 NGYCKAEKIDDALRVKSIMISS-KCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGL 458
Query: 159 KLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEA 218
Y +ID + + +V + + EG P++ T + L + + KA A
Sbjct: 459 SPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMA 518
Query: 219 MLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLN 278
++ +M+ D + T L+ + + D R++++ E N A L
Sbjct: 519 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 578
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K AE + + K L+ YT+L+ ++ L+++M GC +
Sbjct: 579 KSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYS 638
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
L++ + ++ +A SIL + + K +Y +I+ + K G + +F+ M
Sbjct: 639 VLLQALCKQKKLNEALSILDQMTLRG-VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMIS 697
Query: 399 VGYVARFKQFQTLVQAY 415
G+ + + +Y
Sbjct: 698 SGHKPSAITYTVFISSY 714
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 141/331 (42%), Gaps = 15/331 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V+Y L+ C A E F+ MK KG ACN +L L+ + ++ + A VL
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + +K + ++ I+I++ + L + + M++ GI+P+ T + Y S GR
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLDVCMA 269
E A + M+ +K +T + + GK ++ + + K P
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK-VYADHKMLSKGKDLVKQMAES 328
I+ + +E A +M + + Y L+ ++ D KM + ++K+M+E
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKM-DEADGIIKEMSEK 360
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKA----DSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
G + ++ L+ + G V+KA D ++ K Q P +Y ++ +KRG
Sbjct: 361 GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQ-----PTRVTYTSLIYVLSKRG 415
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + +F ++ + G F L+ +
Sbjct: 416 RMKQADDLFEKIVRKGIFPDLIMFNALIDGH 446
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 137/325 (42%), Gaps = 5/325 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V Y T++ + V+ A +F+ MK +G S+ + + K ++ + +L
Sbjct: 227 VTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEK 286
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M++ ++ T +Y LID +L + M EG+ P ST +L +
Sbjct: 287 MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK 346
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
++A+ ++KEM L T +L+ Y G + + S P +
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS 406
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K ++++A+ +F+++ + + AL+ + + + + ++K+M +
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ L++ G+VE A L++ + KP SY ++ Y+KRGD+
Sbjct: 467 VVPDEVTFNTLMQGRCREGKVEAARE-LIEEMKSRGIKPDHISYNTLISGYSKRGDMKDA 525
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQA 414
++ M +G+ + L+Q
Sbjct: 526 FRVRDEMLSIGFNPTLLTYNALIQG 550
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 6/206 (2%)
Query: 237 LLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
LL+ EL + D + + + P + C + + K N+ E+A ++ M +
Sbjct: 126 LLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRM 185
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K S + ++ V L K K+ + M G + ++ ++ + G VE A
Sbjct: 186 RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGA 245
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
++ + KP +Y + K G + + +M+++G + TL+
Sbjct: 246 -RMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLID 304
Query: 414 AYINAKT--PAYGIRDRMRADNVFPN 437
Y N A+ RD+M + + P
Sbjct: 305 GYCNKGNLEMAFDYRDKMVREGLMPT 330
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 158/419 (37%), Gaps = 66/419 (15%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY--------KRLDKKK 145
V + TLL A N V A +F ++ V C ++Y KR +K
Sbjct: 133 VTFNTLLGGLFAENKVTDAVVLFKKL------VREKICEPNEVMYGTVMNGLSKRGHTEK 186
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
+L +ME+ N K +Y I+ID + +L ++ MK + I P+ T L
Sbjct: 187 TLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLID 246
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK---ADQVAR--IWKLCES 260
G+ EK + +L EM N+ + T +L+ + GK AD+V R I K E
Sbjct: 247 GLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVE- 305
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P + A ++ + +V+ A VF + K + Y+ L+ Y K L+K
Sbjct: 306 -PDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQ 364
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI------------------------ 356
L ++++ G + + ++ +E G + A I
Sbjct: 365 LFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYF 424
Query: 357 ----------LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
L ++N+ S Y ++++ K + IF ++ +G + +
Sbjct: 425 KYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVR 484
Query: 407 QFQTLVQAYINAKTPAYGIRDRMRA------DNVFPNKALAAQVAQVDAFRKTAVSELL 459
+ ++ + G+ D ++ DN P + V FR +SE++
Sbjct: 485 TYNVMITGFCRE-----GLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIV 538
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/333 (18%), Positives = 127/333 (38%), Gaps = 40/333 (12%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYK 166
N+ A + N MK K P F N L+ +L + +KV +L M N+ ++
Sbjct: 218 NLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
ILID + + D+V+ M +G+EPD T + + Y G+ ++A + +
Sbjct: 278 ILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDK 337
Query: 227 NLKEHRWTCRLLLPLYA-----------------------------------ELGKADQV 251
+K + ++ +L+ Y E+G+
Sbjct: 338 GIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDA 397
Query: 252 ARIW-KLCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
+I+ ++ P D+C+ + +G K VEEA +F ++ + + + YT ++
Sbjct: 398 KKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVING 457
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ + + + +++ G ++ ++ G ++ IL K + N
Sbjct: 458 LCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRK-MEDNGCPA 516
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+Y +IM + + I M G+
Sbjct: 517 NNITYNVIMQGFFRSNKISEIVSFMKEMAGRGF 549
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 54/309 (17%), Positives = 123/309 (39%), Gaps = 10/309 (3%)
Query: 115 VFNRMKDKGFPVTSFACNQLL---ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDI 171
+F M+ G P++ N + L R+D VL + K + ++ L+
Sbjct: 84 LFREMRILGIPISDSILNIVTNSYCLRHRIDC--AFSVLPIYLKTGIPFNVVTFNTLLGG 141
Query: 172 KGQSNDLTGMDQVVEAMKSEGI-EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
N +T + + + E I EP+ + G EK ++L+ ME N K
Sbjct: 142 LFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKP 201
Query: 231 HRWTCRLLL-PLYAELGKADQVARIWKLCESN--PWLDVCMAAIEAWGKLNKVEEAEAVF 287
T +++ L ++ + + ++ + N P + + I+ KL + E+ + +
Sbjct: 202 DVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLL 261
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
M + ++ L+ + ++++ M E G + + A++ +
Sbjct: 262 SEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLR 321
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+V++A + + KP SY ++++ Y K+ ++ ++F + Q G
Sbjct: 322 GQVDRARRVF-NVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT 380
Query: 408 FQTLVQAYI 416
+ T++ I
Sbjct: 381 YSTILHGLI 389
>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 150/346 (43%), Gaps = 17/346 (4%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQF- 163
N++ A + +MK+ G T+ N L+ Y K + + LL ++E+ NV +
Sbjct: 123 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSALLDLMLEESNVDVRPNI 182
Query: 164 -SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
++ +L+ + + +VV M+ G+ PD+ T +A YV G +AE+ + E
Sbjct: 183 RTFNVLVQAWCKKKKVEEAWEVVHKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 242
Query: 223 --MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWG 275
+ + K + TC +++ Y G+ R + E+N L V + I +
Sbjct: 243 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEAN--LVVFNSLINGFV 300
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
++ + + V M + K Y+ ++ ++ + K + K+M ++G
Sbjct: 301 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 360
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
A+ L K +V E +KA+ +L +++ P + ++ + G + ++F++
Sbjct: 361 AYSILAKGYVRAKEPKKAEELLETLIVESR--PNVVIFTTVISGWCSSGSMDDAMRVFNK 418
Query: 396 MRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKA 439
M + G K F+TL+ Y+ K P A + MR V P +
Sbjct: 419 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGFGVKPENS 464
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ VFK +++T + S YT LL K +V ++ +SG + ++A++
Sbjct: 57 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSLSSIVSEVEQSGTKPDSIFFNAVI 116
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
E G +E A LLK ++ P S+Y ++ Y G + + M +
Sbjct: 117 NAFSESGNMEDAVQALLKMKELG-LNPTTSTYNTLIKGYGIAGKPERSSALLDLMLEESN 175
Query: 402 V---ARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVA 445
V + F LVQA+ K A+ + +M V P+ +A
Sbjct: 176 VDVRPNIRTFNVLVQAWCKKKKVEEAWEVVHKMEECGVRPDTVTYNTIA 224
>gi|193848521|gb|ACF22711.1| PPR protein [Brachypodium distachyon]
Length = 292
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLMEKENVKLTQFSY 165
N + A + FNRM+++G N L+ +++ + + ++ M + N +Y
Sbjct: 42 NCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTY 101
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
I+I++ G+ G++ ++ MK +G+ P+ T L Y GR ++A ++ M+
Sbjct: 102 NIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKA 161
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCMAAIEAWGKLNKVEE 282
D LK L+ YA+ G AD + K ++ V + + A+G+ +V E
Sbjct: 162 DGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVE 221
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
A +V + M + + YT L+K + K + ++M SGC
Sbjct: 222 AFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGC 269
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 4/241 (1%)
Query: 140 RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST 199
R D +K VL M V+ + Y ++ID G+ N L M+ EGIEPD T
Sbjct: 6 RGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVT 65
Query: 200 QAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE 259
L + GGR ++A + +EM N T +++ L E + V + +
Sbjct: 66 WNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMK 125
Query: 260 SN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
P + ++ +G+ + +EA + M K S Y AL+ YA +
Sbjct: 126 EQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKPSPTMYHALVNAYAQRGLAD 185
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
++VK M G + ++L+ E V +A S+ L+ ++N +P +Y +
Sbjct: 186 HALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSV-LQFMKENDLRPDVITYTTL 244
Query: 377 M 377
M
Sbjct: 245 M 245
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 106/254 (41%), Gaps = 10/254 (3%)
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE---LGKADQVARIWKLCESNPWLDVC 267
G +KA A+L+EM ++ R +++ + + LG A + P +
Sbjct: 7 GDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTW 66
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
I+A K + + A +F+ M ++ T Y ++ + + + + ++ +M E
Sbjct: 67 NTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKE 126
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G + + LV ++ G ++A + + + + KP + Y +++ YA+RG
Sbjct: 127 QGLVPNIITYTTLVDVYGRSGRFKEAIECI-EVMKADGLKPSPTMYHALVNAYAQRGLAD 185
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN----KALA 441
+ MR G A +L+ A+ + A+ + M+ +++ P+ L
Sbjct: 186 HALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLM 245
Query: 442 AQVAQVDAFRKTAV 455
+ +++ F K V
Sbjct: 246 KALIRIEQFDKVPV 259
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 138/334 (41%), Gaps = 8/334 (2%)
Query: 91 RGEVVYRTLLAN--CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVA 147
R ++V + L N C+ G V +A + +RM + GF +L L K +
Sbjct: 172 RPDLVTVSTLINGLCLKGR-VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
D+ ME+ N+K + Y I+ID + + M+ +GI+ D T + L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWL 264
+ G+ + ML+EM G N+ T L+ ++ + GK + ++ + P
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ I+ + K N + EA +F M + Y+ L+ Y K + G L ++
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
++ G + ++ LV + G++ A L + P +Y +++D G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKE-LFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+++ +IF +M++ + ++ NA
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 33/256 (12%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+Y LID + N L +Q+ + M S+G EPD T +IL Y R + + +E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ L + T L + C+S GKLN +E
Sbjct: 411 ISSKGLIPNTITYNTL---------------VLGFCQS--------------GKLNAAKE 441
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
+F+ M S Y LL D+ L+K ++ ++M +S +G ++ ++
Sbjct: 442 ---LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+V+ A S+ + KP +Y +++ K+G + + +F +M++ G
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 403 ARFKQFQTLVQAYINA 418
+ L++A++
Sbjct: 558 PDDFTYNILIRAHLGG 573
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 70/164 (42%), Gaps = 8/164 (4%)
Query: 84 QKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK 143
+ +P S V Y LL + KA E+F +M+ + N +I++ +
Sbjct: 449 RGVPPSV---VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN--IIIHGMCNA 503
Query: 144 KKVAD---VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQ 200
KV D + + + VK +Y ++I + L+ D + MK +G PD T
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Query: 201 AILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
IL + ++ G + +++EM+ T ++++ + ++
Sbjct: 564 NILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 138/334 (41%), Gaps = 8/334 (2%)
Query: 91 RGEVVYRTLLAN--CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVA 147
R ++V + L N C+ G V +A + +RM + GF +L L K +
Sbjct: 201 RPDLVTVSTLINGLCLKGR-VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 259
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
D+ ME+ N+K + Y I+ID + + M+ +GI+ D T + L
Sbjct: 260 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 319
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWL 264
+ G+ + ML+EM G N+ T L+ ++ + GK + ++ + P
Sbjct: 320 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 379
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+ I+ + K N + EA +F M + Y+ L+ Y K + G L ++
Sbjct: 380 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 439
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
++ G + ++ LV + G++ A L + P +Y +++D G
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKE-LFQEMVSRGVPPSVVTYGILLDGLCDNG 498
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+++ +IF +M++ + ++ NA
Sbjct: 499 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 532
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 103/256 (40%), Gaps = 33/256 (12%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+Y LID + N L +Q+ + M S+G EPD T +IL Y R + + +E
Sbjct: 380 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 439
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEE 282
+ L + T L + C+S GKLN +E
Sbjct: 440 ISSKGLIPNTITYNTL---------------VLGFCQS--------------GKLNAAKE 470
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
+F+ M S Y LL D+ L+K ++ ++M +S +G ++ ++
Sbjct: 471 ---LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 527
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+V+ A S+ + KP +Y +++ K+G + + +F +M++ G
Sbjct: 528 GMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 586
Query: 403 ARFKQFQTLVQAYINA 418
+ L++A++
Sbjct: 587 PDDFTYNILIRAHLGG 602
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
+P S V Y LL + KA E+F +M+ + N +I++ + K
Sbjct: 480 VPPSV---VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN--IIIHGMCNASK 534
Query: 146 VAD---VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
V D + + + VK +Y ++I + L+ D + MK +G PD T I
Sbjct: 535 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 594
Query: 203 LAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
L + ++ G + +++EM+ T ++++ + ++
Sbjct: 595 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 636
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 136/327 (41%), Gaps = 6/327 (1%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLL 151
+ Y T++ +C G + + +F M+ +G N LL A+ V
Sbjct: 214 LTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFR 273
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + V +Y L+D G+ N L + ++++ M S G P+ S+ +L + Y G
Sbjct: 274 TMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIG 333
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCM 268
E A + + M+ + T +LL LY + G+ D+V ++ K+ + P
Sbjct: 334 NIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYN 393
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I+ +G+ +E +F M++ + + + Y L+ + K ++ M+E
Sbjct: 394 TLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEK 453
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G A+ +++ + + E+A + L + KP +Y ++ +A+ G
Sbjct: 454 GMIPSSKAYTGVIEAYGQAAMYEEA-LVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKE 512
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAY 415
TE I +M G F +++ +
Sbjct: 513 TEAILLKMGDFGVARERDSFNGVIEGF 539
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/385 (18%), Positives = 151/385 (39%), Gaps = 45/385 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TLL C +AE VF M + G L+ + +L++ KV+++L
Sbjct: 250 VTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKE 309
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M SY +L++ + ++ V M+ G P++ T +IL Y GR
Sbjct: 310 MASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGR 369
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN---------- 261
++ + EM+ N + T L+ ++ E G +V ++ + E N
Sbjct: 370 YDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEG 429
Query: 262 ---------------------------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
P IEA+G+ EEA M++
Sbjct: 430 LIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMG 489
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K + + Y L+ ++A + + + ++ +M + G +++ +++ +GG+ E+A
Sbjct: 490 SKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAI 549
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ ++++ P + ++ Y G + + + F ++ G + + ++
Sbjct: 550 KAYVE-MEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAV 608
Query: 415 YINAK--TPAYGIRDRM---RADNV 434
Y + AY + D M RA N+
Sbjct: 609 YAKSDRWNEAYELLDEMLTNRASNI 633
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 11/182 (6%)
Query: 286 VFKRMSK-TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+FK M + W K + YT ++ + +L K D+ ++M G ++ AL+ +
Sbjct: 129 LFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSY 188
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG-DIHSTEKIFHRMRQVGYVA 403
G+ E + LL+ ++ + P +Y +++ A+ G D +F MR G
Sbjct: 189 GRNGKYEVSLE-LLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQP 247
Query: 404 RFKQFQTLVQAYIN--AKTPAYGIRDRMRADNVFPNKALAAQVAQVDAF----RKTAVSE 457
+ TL+ A N A + M V P+ + VD F R VSE
Sbjct: 248 DIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPD--ITTYTYLVDTFGKLNRLDKVSE 305
Query: 458 LL 459
LL
Sbjct: 306 LL 307
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 5/301 (1%)
Query: 122 KGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
KG + ++ C+ LL L K K VL ++ + T Y LI+ Q DL G
Sbjct: 150 KGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRG 209
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+ E MKS I PD T L KAE ++ EME + T L+
Sbjct: 210 AFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLID 269
Query: 241 LYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
Y G+ ++ + + + DV + ++A+ K K+ EA A+ M
Sbjct: 270 AYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAP 329
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ + Y +++ Y + + LV++M SG + ++ L+K ++++A+ ++
Sbjct: 330 NAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELI 389
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
+ Q +P SY I+ +GD ++ M + G + + TLV A +
Sbjct: 390 YTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALAS 448
Query: 418 A 418
A
Sbjct: 449 A 449
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 139/333 (41%), Gaps = 13/333 (3%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVL 150
G LL V KAE+V + G T+ N L+ Y ++ D + +
Sbjct: 155 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 214
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ +++ +Y LI+ + +T + +V M+ G++P T L Y +
Sbjct: 215 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 274
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA-----RIWKLCESNPWLD 265
G+ EK +L +M+ +K + ++ + + GK + I+K + P
Sbjct: 275 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK--DVAPNAQ 332
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
V + I+A+ + E+A + ++M + S Y LLK + + ++L+ +
Sbjct: 333 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 392
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF--KPMFSSYMLIMDQYAKR 383
G ++++ ++ G+ +KA +L Q+ NK+ +P +Y ++ A
Sbjct: 393 RNQGLRPDVVSYNTIISACCNKGDTDKALELL---QEMNKYGIRPTLRTYHTLVSALASA 449
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
G +H E ++ +M + +V AY+
Sbjct: 450 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 482
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 4/238 (1%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+++ M S + PD T +IL G ++ E + +TC +LL
Sbjct: 108 LMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLC 167
Query: 244 ELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
+ G KA+QV + P + I + ++ + A +F++M +
Sbjct: 168 KDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHI 227
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y AL+ +M++K +DLV +M +SG ++ L+ + G++EK ++L
Sbjct: 228 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 287
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
QQ+ K S+ ++ + K G I I M + + +++ AYI +
Sbjct: 288 QQKG-IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES 344
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
V Y LL + + +AEE+ ++++G + N ++ + D K ++L
Sbjct: 367 VTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQE 426
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K ++ T +Y L+ + + M+ + + M + +EP SS I+ YV
Sbjct: 427 MNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCEN 486
Query: 213 KEKAEAMLKEM 223
K ++ KEM
Sbjct: 487 DSKVASLKKEM 497
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 114/279 (40%), Gaps = 18/279 (6%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVV--YRTLLANCVAGNNVKKAEEVFNRMK 120
Y + ++ + KL + KAE + ++ +S V + TL+ ++K V + M+
Sbjct: 229 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 288
Query: 121 DKGF--PVTSFACNQLLILYKRLDKKKVADVLLLMEK---ENVKLTQFSYKILIDIKGQS 175
KG V SF ++ K+ + + +++ ++V Y +ID +S
Sbjct: 289 QKGIKSDVISFGS----VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES 344
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
D +VE MK+ G+ T +L K + ++AE ++ + L+ +
Sbjct: 345 GDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 404
Query: 236 RLLLPLYAELGKADQVARIWKLCESN-----PWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
++ G D+ + + E N P L + A +V + E ++++M
Sbjct: 405 NTIISACCNKGDTDKALELLQ--EMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ S+ Y ++ Y + SK L K+M+E G
Sbjct: 463 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501
>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
Length = 796
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 121/308 (39%), Gaps = 34/308 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TL+ + + +A + M+D F N L+ LY + +KV +V
Sbjct: 171 VAYNTLIKVYGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDE 230
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+K L + Y++++ G+ L + E MK+EG +P++ + L + GR
Sbjct: 231 MQKIGCSLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGR 290
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
E +EM E P L + IE
Sbjct: 291 LEIGTKYFEEMRS--------------------------------LEIRPLLGTFASLIE 318
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
A+ K ++E FK M K + Y AL+ +A ML + ++M G +
Sbjct: 319 AYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWL 378
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
PL + L++ H + G+ E A L + + +P + +++ AK G E+I
Sbjct: 379 PPLIFAVLIEQHAQAGKAETAVR-LYREMRGVGLRPSHFTCRIVVGAVAKGGKYDDVERI 437
Query: 393 FHRMRQVG 400
M+++G
Sbjct: 438 LFEMQEMG 445
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 124/284 (43%), Gaps = 10/284 (3%)
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
+ +S+ IL++ G+ D + +V+ +K++ + L K Y + ++A
Sbjct: 134 STYSFSILLNTYGRGKDFQAVQRVLADLKADKCPMTTVAYNTLIKVYGKAHKLDEAWGYY 193
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKL 277
KEM+ +T L+ LY+ G++++V ++ ++ + LD + GK+
Sbjct: 194 KEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVVPHAGKV 253
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL-- 335
+++ A +F+RM + + Y+AL+ L G ++M I PL
Sbjct: 254 GRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEM--RSLEIRPLLG 311
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
+ +L++ + + G +E K + +KP Y ++D +AK G + + + + R
Sbjct: 312 TFASLIEAYCKSGRLETGLK-FFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYER 370
Query: 396 MRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
MR VG F L++ + A +R MR + P+
Sbjct: 371 MRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPS 414
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME N K Y L+D ++ L + E M+ G+ A+L + + G+
Sbjct: 336 MEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGK 395
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLDVCMAAI 271
E A + +EM G L+ +TCR+++ A+ GK D V RI +++ E L+V A
Sbjct: 396 AETAVRLYREMRGVGLRPSHFTCRIVVGAVAKGGKYDDVERILFEMQEMG--LNVADAVN 453
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWK---KLSTKHYTALLKVYAD--HKMLSKG-----KDL 321
++ KL V++ KR+S W+ K++ +T + + + H LS G + +
Sbjct: 454 DSIVKL--VDD-----KRISDAWELFLKVTGHGFTPHVSLCREILHGFLSCGDMEHARQM 506
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ M G + + L++ + G +E + I+
Sbjct: 507 LSFMQRPGSAVDLRTYCMLLEFFLRGSRLEHEEVII 542
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGXAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQHRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AVLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/441 (18%), Positives = 173/441 (39%), Gaps = 74/441 (16%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLC---- 58
Query: 62 DYASCLDLIAKLRG----------------------LQKAESYIQKIPES--FRGEVVYR 97
DY+ + + ++L+ ++A S I ++ + Y
Sbjct: 59 DYSKAISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYS 118
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKE 156
TLL V +A VF M++ + CN ++ +Y +L K AD L M K
Sbjct: 119 TLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
++ SY L+ + G + + M+ + IE + T + Y EKA
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 238
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGK 276
+++EM+ ++ + T ++ ++ ++GK D+ A
Sbjct: 239 NNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAA------------------------ 274
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
+F+++ + ++ Y ++ Y +++ K L+ ++ +
Sbjct: 275 --------VLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIP 322
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFH 394
D + + G +E+A + +A + K +F + + +Y K G++ ++F
Sbjct: 323 RDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFD 379
Query: 395 RMRQVGYVARFKQFQTLVQAY 415
+MR +GY ++ AY
Sbjct: 380 KMRGLGYFPDSNVIALVLNAY 400
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M+ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 EIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 139/377 (36%), Gaps = 89/377 (23%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
++ +L+ + + A ++ RM D G P A N + ++ D+L L E
Sbjct: 179 LFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAE 238
Query: 155 KENVKLTQFSYKI-LIDIKGQSNDLTGMD------QVVEAMKSEGIEPDSSTQAILAKHY 207
K ++ S + ++ + L GM Q+++ M +G PD+ST + +
Sbjct: 239 KVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFL 298
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVC 267
+ EKA + +EM+ + +T +L
Sbjct: 299 CEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL----------------------------- 329
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
I+++ K +E+A + F M + YTALL Y K L + D+ +M +
Sbjct: 330 ---IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKA-------------------------DSI------ 356
+GC + + ALV + GE++KA DSI
Sbjct: 387 AGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVT 446
Query: 357 -------------------LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
LL A N +P Y ++D + K G I + +++F RM
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506
Query: 398 QVGYVARFKQFQTLVQA 414
+ GY+ + +L+ A
Sbjct: 507 KCGYLPTVHTYTSLIDA 523
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 139/369 (37%), Gaps = 59/369 (15%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
V Y LL + + +A ++FNRM D G P + + L+ L K + +K +V
Sbjct: 359 VTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEV--- 415
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
Y LI ++D G D E ++ I P+ T L +
Sbjct: 416 ------------YTKLIG----TSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHK 459
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCMAAI 271
A+ +L M + CE N + D A I
Sbjct: 460 VVDAQELLDAMLSNG------------------------------CEPNHIIYD---ALI 486
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+ + K+ K++ A+ VF RMSK + YT+L+ + L ++ QM ES C
Sbjct: 487 DGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCT 546
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ + A++ GE +KA LL ++ P +Y ++D K G + + +
Sbjct: 547 PNVVTYTAMIDGLCRIGECQKALK-LLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQ 605
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNKALAAQVAQVDA 449
+F +M G + ++ L+ A A+ + M+ + K L + V
Sbjct: 606 LFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK--QTYWPKYLQGYCSVVQG 663
Query: 450 FRKTAVSEL 458
F K ++ L
Sbjct: 664 FSKKFIASL 672
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 22/199 (11%)
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+K +L +ME++ +Y LID G+S + Q+ M ++G P+ T +L
Sbjct: 566 QKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVL 625
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT------CRLLLP----LYAELGKADQVAR 253
H + G ++A ++L EM K+ W C ++ A LG +++
Sbjct: 626 INHCCAAGLLDEAHSLLSEM-----KQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELES 680
Query: 254 IWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM---SKTWKKLSTKHYTALLKVYA 310
+ P V I+ + K ++EEA + K M S + S YT+L++
Sbjct: 681 HGTV----PIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALC 736
Query: 311 DHKMLSKGKDLVKQMAESG 329
L K +L ++ G
Sbjct: 737 LASQLEKAFELYSEITRKG 755
>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
Length = 796
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 122/308 (39%), Gaps = 34/308 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y TL+ + + +A + M+D F N L+ LY + +KV +V
Sbjct: 171 VAYNTLIKVYGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDE 230
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+K L + Y++++ G+ L + E MK+EG +P++ + L + GR
Sbjct: 231 MQKIGCSLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGR 290
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
E +EM + E P L + IE
Sbjct: 291 LEIGTKYFEEM--------------------------------RSLEIRPLLGTFASLIE 318
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
A+ K ++E FK M K + Y AL+ +A ML + ++M G +
Sbjct: 319 AYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWL 378
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
PL + L++ H + G+ E A L + + +P + +++ AK G E+I
Sbjct: 379 PPLIFAVLIEQHAQAGKAETAVR-LYREMRGVGLRPSHFTCRIVVGAVAKGGKYDDVERI 437
Query: 393 FHRMRQVG 400
M+++G
Sbjct: 438 LFEMQEMG 445
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 124/284 (43%), Gaps = 10/284 (3%)
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
+ +S+ IL++ G+ D + +V+ +K++ + L K Y + ++A
Sbjct: 134 STYSFSILLNTYGRGKDFQAVQRVLSDLKADKCPMTTVAYNTLIKVYGKAHKLDEAWGYY 193
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKL 277
KEM+ +T L+ LY+ G++++V ++ ++ + LD + GK+
Sbjct: 194 KEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVVPHAGKV 253
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL-- 335
+++ A +F+RM + + Y+AL+ L G ++M I PL
Sbjct: 254 GRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEM--RSLEIRPLLG 311
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
+ +L++ + + G +E K + +KP Y ++D +AK G + + + + R
Sbjct: 312 TFASLIEAYCKSGRLETGLK-FFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYER 370
Query: 396 MRQVGYVARFKQFQTLVQAYINAKTPAYGIR--DRMRADNVFPN 437
MR VG F L++ + A +R MR + P+
Sbjct: 371 MRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPS 414
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME N K Y L+D ++ L + E M+ G+ A+L + + G+
Sbjct: 336 MEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGK 395
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLDVCMAAI 271
E A + +EM G L+ +TCR+++ A+ GK D V RI +++ E L+V A
Sbjct: 396 AETAVRLYREMRGVGLRPSHFTCRIVVGAVAKGGKYDDVERILFEMQEMG--LNVADAVN 453
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWK---KLSTKHYTALLKVYAD--HKMLSKG-----KDL 321
++ KL V++ KR+S W+ K++ +T + + + H LS G + +
Sbjct: 454 DSIVKL--VDD-----KRISDAWELFLKVTGHGFTPHVSLCREILHGFLSCGDMEHARQM 506
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ M G + + L++ + G +E + ++
Sbjct: 507 LSFMQRPGSAVDLRTYCMLLEFFLRGSRLEHEEVVM 542
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 126/295 (42%), Gaps = 8/295 (2%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKI 167
+ + E F R D GF ++ +CN LL L K + + V M K ++L S+ I
Sbjct: 101 ILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNI 160
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR---KEKAEAMLKEME 224
+++ + L V+E MK G+ P+ T L Y GR KA+A+LKEM
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV 220
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVE 281
+ + T +L+ + + R++ + P + I KV+
Sbjct: 221 AKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVD 280
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA A+ +M + + + + L+ + +K +++ +L M + G + + L+
Sbjct: 281 EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLI 340
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ + G +E A ++ + F P S+Y ++ ++GD+ + + + M
Sbjct: 341 DAYCKDGRMEDAFALYNMMIDRGIF-PEVSTYNCLIAGLCRKGDVKAARSLMNEM 394
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 160/399 (40%), Gaps = 23/399 (5%)
Query: 62 DYASCLDLIAK---LRGLQKAES-------YIQKIPESFRGEVVYRTLLAN--CVAGNNV 109
DY L LI+ L GL K Y + I V+ ++ N C G +
Sbjct: 113 DYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGK-L 171
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDKKKVADVLLL-MEKENVKLTQFSY 165
+A +V MK G N L+ Y R+ K AD +L M + + + +Y
Sbjct: 172 NRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTY 231
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
ILID + +++G +V M+ +G+ P+ T IL S G+ ++A A+ +M
Sbjct: 232 NILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVS 291
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEE 282
+L+ + T +L+ + + ++ ++ E +P I+A+ K ++E+
Sbjct: 292 SDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMED 351
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
A A++ M Y L+ + + L+ +M + ++ L+
Sbjct: 352 AFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILID 411
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+ GE KA LL + P +Y +MD Y + G++ + + RM + G
Sbjct: 412 SLCKKGESRKAVK-LLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQ 470
Query: 403 ARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNKA 439
A L++ + A G+ + M + PN+
Sbjct: 471 ANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRT 509
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 132/296 (44%), Gaps = 7/296 (2%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
++A EV+ M G + + L++ + KR D + V +L ME VK +SY I
Sbjct: 256 REALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 315
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I + GQ+ +++ M++EG +PD T +L + GR A+ + +M+ +
Sbjct: 316 IRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 375
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEA 285
K R T LL +A+ G++ V IW +++ + D + A I+A ++ +V EA
Sbjct: 376 KPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE 435
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+F M + Y +L+ + +L K M G P + ++ ++
Sbjct: 436 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPK--PNGYTHVLFINY 493
Query: 346 EGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
G E +I ++K P + ++ AK G + +++FH ++ +G
Sbjct: 494 YGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 549
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 143/330 (43%), Gaps = 12/330 (3%)
Query: 94 VVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V Y ++ A C G V +A E+F+ MK KG ++ N L+ + + D+ D L L
Sbjct: 415 VAYTAVIDALCQVGR-VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR--FGDALEL 471
Query: 153 ---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M+ K +++ + I+ G+S + Q E MKS+GI PD +
Sbjct: 472 FKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 531
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLDVCM 268
GR A+ + E++ + T +++ ++ K D+ +I + + E+N DV +
Sbjct: 532 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLV 591
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ I+ K + +EA +F ++ + + + Y LL + + L+++M
Sbjct: 592 VNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 651
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
S + ++ ++ + G V A +L + P SSY ++ K
Sbjct: 652 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGLVKEERY 710
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ IF +M++V + + T++ +++
Sbjct: 711 NEAFSIFCQMKKV-LIPDYATLCTILPSFV 739
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 21/286 (7%)
Query: 41 GKALQLSEWLETNKKL-----DFIERDYASCLDLIAKLRGLQKA-ESYIQKIPESFR-GE 93
GK++++ E L+ +++ + Y + + + K R L++A + Y + + F
Sbjct: 880 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 939
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
Y LL + ++ AE +FN M + G N LL ++ + +KV +
Sbjct: 940 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 999
Query: 153 MEKENVKLTQFSYKILIDI---KGQSND-LTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
M + + SY I+ID GQ ND LT Q++E G+EPD T +L
Sbjct: 1000 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM----GLEPDLITYNLLIDGLG 1055
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LD 265
R E+A ++ EM+ + + +T L+ + GKA + ++++ + W +
Sbjct: 1056 KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1115
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRM--SKTWKKLSTKHYTALLKVY 309
A I + + A A + RM ST H L+K +
Sbjct: 1116 TYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTF 1161
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 128/338 (37%), Gaps = 13/338 (3%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKE-NVKLTQFSYKILI 169
+A E+ + K G + + + N L+ + +A+ L KE +F+Y +L+
Sbjct: 817 EAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 876
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D G+S + M +V E M +G E T + V R E+A + +
Sbjct: 877 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 936
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWL-DVCMAAIEAWGKLNKVEEA 283
T LL + G+ + ++ C++N + ++ + G KV
Sbjct: 937 PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH- 995
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F+ M K YT ++ L+ G +Q+ E G + ++ L+
Sbjct: 996 --LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 1053
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ +E+A S L Q+ P +Y ++ K G K++ + G+
Sbjct: 1054 LGKSKRLEEAVS-LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKP 1112
Query: 404 RFKQFQTLVQAY-INAKT-PAYGIRDRMRADNVFPNKA 439
+ L++ Y ++ T AY RM PN +
Sbjct: 1113 NVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSS 1150
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 165/400 (41%), Gaps = 44/400 (11%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLME 154
Y TLL + N K+A VF+ M+ G + C L+ K + +V M+
Sbjct: 328 YGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQ 387
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
V + + +I++ G D+ +++ +++S + D ++ Y+ G E
Sbjct: 388 SAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYGMHE 447
Query: 215 KAEAMLKEMEG-DNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLD--VCMAA 270
+A + K ME D L +T +L + + Q I W+L S+ LD +C
Sbjct: 448 EAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCV 507
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD---LVKQMA- 326
+ + +EE +F+ M +T + ++ +Y ML + +D L +Q+
Sbjct: 508 LNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGV 567
Query: 327 -----------------------------ESGCHIGPL-AWDALVKLHVEGGEVEKADSI 356
++ H G L A++ ++ + + G ++K + +
Sbjct: 568 ADKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDV 627
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ + +++ + +SY ++++ Y + I E +FH+M++ G++ + T+++ Y
Sbjct: 628 IAR-MEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYG 686
Query: 417 NAKTP--AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTA 454
A P A M+ + P++ V V AF K
Sbjct: 687 YADYPDKAVDTFKMMQDSGIMPDR--VTYVMLVAAFEKAG 724
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLL 151
++ + TL+ + + + E M++ G + A N +L Y + K+ DV+
Sbjct: 570 KITFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIA 629
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
MEK +++ SY ILI+I G+ + M+ + M+ EG PD T + + Y
Sbjct: 630 RMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYAD 689
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
+KA K M+ + R T +L+ + + G + AR W L
Sbjct: 690 YPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLEAAR-WSL 734
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 105/260 (40%), Gaps = 3/260 (1%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+SY I+ I G +D+++ M +G PD T L + A +
Sbjct: 12 YSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAFQM 71
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKAD--QVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
M ++ R T +++ LY + GK + +VA L + A I + +
Sbjct: 72 MLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAAYSAMIAIYTRCGFF 131
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
E+AE + + M ++ + Y + + + ++ M G H+G + ++++
Sbjct: 132 EKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSM 191
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ + + G EKA + K ++ +P +Y ++ + G + F M+++G
Sbjct: 192 ITAYGKAGLYEKALRLFEKMKEAG-LEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLG 250
Query: 401 YVARFKQFQTLVQAYINAKT 420
+ F TL+ Y A+
Sbjct: 251 IMPASSNFNTLISLYGKARN 270
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/374 (19%), Positives = 154/374 (41%), Gaps = 16/374 (4%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKK 145
+P+ + + TL+ + + A F M +KG T + +++LY++ K +
Sbjct: 43 VPDDY----TFNTLIMSASKADYADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVE 98
Query: 146 VADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
A+V M + +++ +Y +I I + ++++E M + I PD
Sbjct: 99 DAEVAFSHMLQSGIQVVA-AYSAMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQM 157
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPW 263
Y G+ E+AE ++ ME + ++ Y + G ++ R++ K+ E+
Sbjct: 158 NTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLE 217
Query: 264 LD----VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
D CM I A G+ K+ +A F+ M + ++ ++ L+ +Y + +
Sbjct: 218 PDEVTYSCM--IGACGRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIV 275
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
++ M GC DA+V+ + G+ +K +L ++ + SY ++
Sbjct: 276 RVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDT-ESYGTLLHV 334
Query: 380 YAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
Y K +F MR+ G + ++L+ A +A A + M++ V P+
Sbjct: 335 YLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPS 394
Query: 438 KALAAQVAQVDAFR 451
+ + V +
Sbjct: 395 LETSCTMINVHGLK 408
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/380 (18%), Positives = 146/380 (38%), Gaps = 48/380 (12%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVL 150
G V Y +++ +KA +F +MK+ G + ++ R K + A D
Sbjct: 184 GVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYF 243
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M++ + ++ LI + G++ ++ G+ +V+ MK+ G PDS T + + Y
Sbjct: 244 QAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERA 303
Query: 211 GRKEK-----------------------------------AEAMLKEMEGDNLKEHRWTC 235
G+ +K A ++ M + + C
Sbjct: 304 GQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMC 363
Query: 236 RLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK 292
R L+ + G + +++ +S P L+ I G V++AE +F+ +
Sbjct: 364 RSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRS 423
Query: 293 TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM-AESGCHIGPLAWDALVKLHVEGGEVE 351
+ KL Y ++ VY + M + + K M E G + +++++ +
Sbjct: 424 SVSKLDIIAYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQT 483
Query: 352 KADSILLKAQQQN-KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
+A+ I + + + + + + +++ A+ + KIF M VG + F
Sbjct: 484 QAEEIYWRLRNSDVELDEVMCN--CVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNV 541
Query: 411 LVQAYINAKTPAYGIRDRMR 430
++ Y + G+ DR R
Sbjct: 542 MIDLYGKS-----GMLDRAR 556
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 129/320 (40%), Gaps = 43/320 (13%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKK 144
+P+S+ Y ++L C N +AEE++ R+++ + CN +L R L +
Sbjct: 463 LPDSY----TYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLE 518
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+V + M ++ ++ID+ G+S L + + G+ D T + L
Sbjct: 519 EVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGV-ADKITFSTLI 577
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW- 263
Y G+K+ + ME A +W++ +
Sbjct: 578 NSY---GKKQD----FRNME---------------------------ATLWEMQNAGHGG 603
Query: 264 -LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
L+ ++A+GK +++ E V RM K+ ++ Y L+ +Y H +++ + L
Sbjct: 604 SLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALF 663
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+M E G ++ +++ + +KA K Q + P +Y++++ + K
Sbjct: 664 HKMQEEGFIPDRWTYNTMIRTYGYADYPDKAVDT-FKMMQDSGIMPDRVTYVMLVAAFEK 722
Query: 383 RGDIHSTEKIFHRMRQVGYV 402
G++ + M Q GY
Sbjct: 723 AGNLLEAARWSLWMTQAGYT 742
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/304 (17%), Positives = 119/304 (39%), Gaps = 35/304 (11%)
Query: 113 EEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLLLMEKENVKLTQFSYKILIDI 171
+E+ +M G + N L++ + D A +M ++ V+ T+ +Y +++ +
Sbjct: 31 DELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAFQMMLEKGVQPTRLTYSMMMLL 90
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
++ + + M GI+ ++ A++A Y G EKAE ++++M +
Sbjct: 91 YQKNGKVEDAEVAFSHMLQSGIQVVAAYSAMIAI-YTRCGFFEKAEKIMEDMWNHKIAPD 149
Query: 232 RWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
R + WL + +G+ K+EEAE + M
Sbjct: 150 R----------------------------DNWLK----QMNTYGQQGKIEEAEHIMDTME 177
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+ L Y +++ Y + K L ++M E+G + + ++ G++
Sbjct: 178 RLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLR 237
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
A +A ++ P S++ ++ Y K ++ ++ M+ G + +
Sbjct: 238 DALD-YFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAV 296
Query: 412 VQAY 415
V+AY
Sbjct: 297 VRAY 300
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE
1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/407 (18%), Positives = 172/407 (42%), Gaps = 13/407 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVV--YRTLLANCVAGNNVKKAEEVFNRMK 120
Y ++ K + QKAES + + +S R + + +L++ ++A +FN M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 121 DKGFPVTSFACNQLL---ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
G T + N LL + RL++ V V+ ++ K+++ S +++D ++ +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYV--VVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + ++ +MK+ G P ++ + G R AE M+ EME N K
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+L +Y + + ++++ + P I + + + EE + ++M
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
Y +L+ + K L + + L +++ G + + ++K+ + G KA+
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
LL+ + +P ++ L+M Y+ G+ EK+ ++ + +++ A
Sbjct: 1053 K-LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 415 YINAKTPAYGIRD--RMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
Y+ +K GI M+ + + P+ + + +F K + +L
Sbjct: 1112 YLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVML 1158
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/338 (17%), Positives = 144/338 (42%), Gaps = 20/338 (5%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
F +Y TLL CVA + +A +VF+ ++ G + C ++++Y +L + A
Sbjct: 678 FGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQ 737
Query: 150 LLLMEKENVKLTQFS----YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
++ + K F+ Y +I+ G+ + VV ++ G PD T L
Sbjct: 738 VV--NQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMS 795
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI--------WKL 257
Y G E+A A+ M D + +LL G+ +++ + +K+
Sbjct: 796 AYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKI 855
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
+S+ L ++A+ + + E + ++ M + + Y ++++ K +
Sbjct: 856 SKSSILL-----MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRD 910
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ +V +M E+ + W++++K++ + +K + + ++ +P ++Y ++
Sbjct: 911 AEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG-LEPDETTYNTLI 969
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Y + + +MR +G + +++L+ A+
Sbjct: 970 IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA----IEAWGKLNKVEEAEAVFKR 289
C+ ++ +Y +LG + ++ E+ + C IEA+GK ++AE+V
Sbjct: 718 VCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGN 777
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ ++ + K + +L+ YA + + + M G + + L+ G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+E+ ++++ Q FK SS +L++D +A+ G+I +KI+ M+ GY+ + ++
Sbjct: 838 LEEL-YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYR 896
Query: 410 TLVQAYINAK 419
+++ K
Sbjct: 897 MMIELLCKGK 906
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 118/310 (38%), Gaps = 39/310 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y TLL+ C +N+ A +VF M
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFED----------------------------------M 323
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E + ++Y +I + G+ +++ ++ +G PD+ T L +
Sbjct: 324 EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNT 383
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCESNPWLDVCMA 269
EK + + ++M+ + T ++ +Y + G+ D +++K L NP
Sbjct: 384 EKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTV 443
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I++ GK N+ EA A+ M K + + Y+AL+ YA + +D M SG
Sbjct: 444 LIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
LA+ ++ + + G E KA L + + P ++ Y L++ K
Sbjct: 504 TKPDNLAYSVMLDVLLRGNETRKAWG-LYRDMISDGHTPSYTLYELMILGLMKENRSDDI 562
Query: 390 EKIFHRMRQV 399
+K M ++
Sbjct: 563 QKTIRDMEEL 572
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 136/345 (39%), Gaps = 15/345 (4%)
Query: 107 NNVKKAEEVFNRMKDK-GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFS 164
N A E+F R + G V + N ++ +Y R K K +++ M + S
Sbjct: 205 NQESLAVEIFTRAEPTVGDRVQVY--NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLIS 262
Query: 165 YKILIDIKGQSNDLTG--MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+ LI+ + +S LT ++++ +++ G+ PD+ T L + A + ++
Sbjct: 263 FNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED 322
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNK 279
ME + WT ++ +Y G A + R++ E + + + + A+ +
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERN 382
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM-AESGCHIGPLAWD 338
E+ + V+++M K Y ++ +Y L L K M SG + + +
Sbjct: 383 TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT 442
Query: 339 ALV-KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
L+ L VE A L+ KP +Y ++ YAK G E F M
Sbjct: 443 VLIDSLGKANRTVEAA--ALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Query: 398 QVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNKAL 440
+ G + ++ + N A+G+ M +D P+ L
Sbjct: 501 RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTL 545
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
F V Y +LL N +K +EV+ +M+ GF N ++ +Y K+ D+
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY---GKQGQLDL 420
Query: 150 LLLMEKENVKLT-----QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
L + K+ L+ +Y +LID G++N ++ M GI+P T + L
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 205 KHYVSGGRKEKAE 217
Y G++E+AE
Sbjct: 481 CGYAKAGKREEAE 493
>gi|410110131|gb|AFV61145.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rehmannii]
Length = 379
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 8 YSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMK 67
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 68 TAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 127
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 188 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 246
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 247 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 288
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/358 (18%), Positives = 143/358 (39%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYI--QKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I K Y TLL V +A VF+ M+
Sbjct: 43 YNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMR 102
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 103 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 162
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 222
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + VE + +F+ M
Sbjct: 223 SIWGKVGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 256
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 257 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 306
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 307 AIDAGEVKDITVFERMIHLLSKYKKYANV---VEVFDKMRGLGYFPDSNVIAVVLNAY 361
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 126/288 (43%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPTTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPESFRGEVV--YRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALILNAY 400
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 5/308 (1%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILID 170
A E+ N+M +KG F LL +++ K K A + M E K ++ LI
Sbjct: 88 ALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIK 147
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
+ G T M +V E +K+ PD T L + G + + KEM+
Sbjct: 148 MHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVP 207
Query: 231 HRWTCRLLLPLYAELGKADQVARIWK-LCES--NPWLDVCMAAIEAWGKLNKVEEAEAVF 287
R T L+ Y+ G DQ ++K + E+ NP L A + A + +++E V
Sbjct: 208 ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVL 267
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
M K + Y +LL YA+ K + + L +++ + LV ++ +
Sbjct: 268 AEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKC 327
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
+ + + L+ +Q+ F P ++ ++ Y +R + +I M++ G+
Sbjct: 328 DLLMETERAFLELRQRG-FSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTT 386
Query: 408 FQTLVQAY 415
+ +L+ Y
Sbjct: 387 YNSLMYMY 394
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 18/326 (5%)
Query: 100 LANCVAGNNV-KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEK 155
L + +A N V + VF++ K+ G +T ++ N L+ + L V +VL + M++
Sbjct: 150 LIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGM--VEEVLWVWRRMKE 207
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
++ + FSY L++ S + ++V E M++ I PD T + K Y G+ K
Sbjct: 208 NGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRK 267
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLL-PLYAELGKADQVARIW-----KLCESNPWLDVCMA 269
A LK ME N+ + T L+ YAE G D ++ K E P V
Sbjct: 268 AFEKLKAMELRNVAPDKITYMTLIQACYAE-GDFDSCLGLYHEMDEKGLEIPP--HVYSL 324
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K K E VF+ M K + YTAL+ A + + L K+M + G
Sbjct: 325 VIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEG 384
Query: 330 CHIGPLAWDALVKLHVEGGEVEKA-DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ + +V + G +++A + + + + MF Y ++D K G +
Sbjct: 385 LEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMF--YSSLIDGLGKSGRVDE 442
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQA 414
E+IF+ M + G + L+ A
Sbjct: 443 AERIFYEMVKKGCPPDSYCYNALIDA 468
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 14/274 (5%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
++ Y TL+ C A + +++ M +KG + L+I D K+V +
Sbjct: 284 KITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHV-YSLVIGGLCKDGKRVEGYTVF 342
Query: 153 --MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M + K Y LID + ++ + + MK EG+EPD T ++
Sbjct: 343 ENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKS 402
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLD 265
GR ++A ++ G + + L+ + G+ D+ RI+ K C + +
Sbjct: 403 GRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSY-- 460
Query: 266 VCM-AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK-VYADHKMLSKGKDLVK 323
C A I+A K K++EA A+ KRM + YT L+ ++ +H+ + L
Sbjct: 461 -CYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRN-EEALTLWD 518
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
M + G A+ AL G+V +A IL
Sbjct: 519 LMIDKGITPTAAAFRALSTGLCLSGKVARACKIL 552
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 126/288 (43%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPDTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/442 (18%), Positives = 178/442 (40%), Gaps = 67/442 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIER 61
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLC---- 58
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNV-KKAEEVFNRMK 120
DY+ + + ++L+ F ++V + N + ++A + + M+
Sbjct: 59 DYSKAISIFSRLK------------RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMR 106
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVK--LTQFSYKILIDIKGQSND 177
G + + + LL +Y ++ KK + L + E +K L + I+ID+ GQ
Sbjct: 107 TAGVTPDTASYSTLLTMY--VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGM 164
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
D++ M+ GIEP+ + L + Y +A + + M+ N++++ T
Sbjct: 165 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 224
Query: 238 LLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ +Y E KA+ + + + P I WGK+ K++ A +F+++ +
Sbjct: 225 MMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 284
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ Y ++ Y +++ K L+ ++ + D + + G +E+A
Sbjct: 285 VDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD----NIPRDIAIHILAGAGRIEEAT 340
Query: 355 SILLKAQQQNKFKP---------MFSSY-------------------------MLIMDQY 380
+ +A + K +FS Y L+++ Y
Sbjct: 341 WVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALVLNAY 400
Query: 381 AKRGDIHSTEKIFHRMRQVGYV 402
K + ++ M++VG V
Sbjct: 401 GKLHEFDKANDVYMEMQEVGCV 422
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 156/375 (41%), Gaps = 25/375 (6%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
VVY L+ + N +A ++ M G + L+ ++ + A +LL
Sbjct: 223 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 282
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M +++ + +Y ++I+ + ++ +++ M++ GI P+ T +I+ G
Sbjct: 283 MVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 342
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMA 269
EKA +L+EM LK + + L+ Y G I+ K+ + N P L +
Sbjct: 343 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 402
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K+ +VEE+ F +M + + Y+ L+ Y + L + LV++M ++G
Sbjct: 403 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 462
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS--------YMLIMDQYA 381
+ + L++ + + ++EK S FK M Y +++ +
Sbjct: 463 LKPNDVIYIDLLESYFKSDDIEKVSS---------TFKSMLDQGVMLDNRIYGILIHNLS 513
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNKA 439
G++ + ++ + + G V + +L+ + A+GI D M V PN
Sbjct: 514 SSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN-- 571
Query: 440 LAAQVAQVDAFRKTA 454
+ A +D K+
Sbjct: 572 IVCYNALIDGLCKSG 586
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 131/347 (37%), Gaps = 48/347 (13%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLL----------ILYK------------------- 139
V+ A EV M+D+G + CN LL +L+K
Sbjct: 63 VQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYST 122
Query: 140 ---------RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
D K VL+ M + L +Y +LI +S + + M+
Sbjct: 123 LIEAYCKVREFDTAK--KVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMED 180
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
G+ PD T L R +A+A+L EM LK + L+ + G AD+
Sbjct: 181 YGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADE 240
Query: 251 VARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
++ K P + K+ +++ A + K+M + + T Y +++
Sbjct: 241 AFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE 300
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH--VEGGEVEKADSILLKAQQQNK 365
+ H L+ +M +G I P + + +H + GE EKA S LL+
Sbjct: 301 GHFRHHNKKDAFRLLSEMENAG--ISPNVYTYSIMIHGLCQSGEPEKA-SDLLEEMTTKG 357
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
KP Y ++ Y + G++ +IF +M +V + + +L+
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 404
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 131/357 (36%), Gaps = 41/357 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNR 118
Y S + ++K+ ++++ Y ++ E RG E Y L+ + +++ AE++ R
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQE--RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 457
Query: 119 MKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M D G P + L +K D +KV+ M + V L Y ILI S +
Sbjct: 458 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 517
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ +V+ ++ G PD + L +EKA +L EM +
Sbjct: 518 MEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGV--------- 568
Query: 238 LLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+P + A I+ K + A VF +
Sbjct: 569 -----------------------DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 605
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ YT+L+ +S L +M +G + L G++E+A +
Sbjct: 606 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA--MF 663
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L + + SS+ ++D + KRG + T K+ H + G V + ++
Sbjct: 664 LIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 720
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 130/315 (41%), Gaps = 33/315 (10%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADVLLL 152
VY +L++ + +KA + + M KG + C LI L K D +V
Sbjct: 539 VYSSLISGLCKTADREKAFGILDEMSKKGVD-PNIVCYNALIDGLCKSGDISYARNVFNS 597
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ + + +Y LID + D++ + M + GI PD+ ++L S G
Sbjct: 598 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 657
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRL--LLPLYAELGKADQVARIWKLCESNPWLDVCMA- 269
E+A +++EM L+ H L+ + + GK + ++ + + +
Sbjct: 658 LEQAMFLIEEM---FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 714
Query: 270 --AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
I + K+ E +F + + + + +H+++L M+++GK
Sbjct: 715 ENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM-----DMINQGKI------- 762
Query: 328 SGCHIGPL-AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM-FSSYMLIMDQYAKRGD 385
PL D +++ H + G ++KA ++L+ K PM SSY+ I+D ++G
Sbjct: 763 ------PLDVVDDMIRDHCKEGNLDKA--LMLRDVIVAKSAPMGCSSYLAIVDNLCRKGK 814
Query: 386 IHSTEKIFHRMRQVG 400
+ + M + G
Sbjct: 815 LSEALNLLKEMDKRG 829
>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
duartei]
Length = 381
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 7 YSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLIGEMK 66
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 67 TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 126
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 127 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 186
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 187 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGV 245
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 246 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 287
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 8/227 (3%)
Query: 40 YGKALQLSEWLETNKKLDFIER--DYASCLDLIAKLRGLQKAESYI--QKIPESFRGEVV 95
Y KA+ + L K+L F Y + +++ K + ++A S I K
Sbjct: 20 YSKAISIFSRL---KRLGFXPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTTS 76
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-ME 154
Y TLL V +A VF+ M++ + CN ++ +Y +L K AD L M
Sbjct: 77 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 136
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
K ++ SY L+ + G + + M+ + IE + T + Y E
Sbjct: 137 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 196
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
KA +++EM+ ++ + T ++ ++ ++GK D+ A +++ S+
Sbjct: 197 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSS 243
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 12/229 (5%)
Query: 163 FSYKILID--IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
F+Y L+D KG DL Q++ M + I P+ T + + Y GR ++A +
Sbjct: 213 FTYNTLLDAVCKGGQMDLAF--QIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLF 270
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKL 277
EM+ ++ R + LL +YA+LG+ ++ + K ES+ + A + +GK
Sbjct: 271 NEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQ 330
Query: 278 NKVEEAEAVFKRM--SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
K EE + VF+ M + + L T Y+ L+ VY+ + + ++ ++ ++G +
Sbjct: 331 GKYEEVKRVFEEMKAERIFPNLLT--YSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVV 388
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
+ AL+ + G VE A S L + ++ +P +Y I+D + + G
Sbjct: 389 LYSALIDALCKNGLVESAVSFLDEMTKEG-IRPNVVTYNSIIDAFGRSG 436
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 137/337 (40%), Gaps = 16/337 (4%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMK------DKGFPVTSFACNQLLILYKRLDKKKV 146
V Y ++ C G + +A E+F+ M +G F N LL + + +
Sbjct: 171 VTYNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDL 230
Query: 147 A-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
A ++ M ++++ +Y +ID ++ L + MK I D + L
Sbjct: 231 AFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLS 290
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---P 262
Y GR E+A + KEME +K+ T LL Y + GK ++V R+++ ++ P
Sbjct: 291 IYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFP 350
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
L I+ + K +EA VF+ K K Y+AL+ + ++ +
Sbjct: 351 NLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFL 410
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+M + G + +++++ G VE A + ++ N+ +F +AK
Sbjct: 411 DEMTKEGIRPNVVTYNSIIDAFGRSGIVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAK 470
Query: 383 -----RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
R +I +FH+M ++ F ++ A
Sbjct: 471 KENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNA 507
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 141/349 (40%), Gaps = 50/349 (14%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL---LILYKRLDKK-KVADVLL 151
Y+TLL++ V + A ++FN +++ +F N + L+ R+D+ K+ D
Sbjct: 671 YKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDS-- 728
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M+ +N+ F+Y L+D G+S L + M EG EPD L GG
Sbjct: 729 -MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGG 787
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN------PWLD 265
+ A + + M T L+ LGK +V + E++ P +
Sbjct: 788 KLSHALIIFRAMAKKRCVPDVVTYSSLID---SLGKEGRVEEAYYFFENSISKGCTPNVG 844
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
V + I+++GK V+ A +F+ M + + Y LL A L+ + L+++M
Sbjct: 845 VYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEM 904
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSI----------------------------- 356
+ GC + ++ L+ + G V++A+S
Sbjct: 905 EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKL 964
Query: 357 -----LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
L + ++ + P +Y +++D + G +H IFH M+ G
Sbjct: 965 LEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKG 1013
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 121/284 (42%), Gaps = 8/284 (2%)
Query: 136 ILYKRL----DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE 191
++ KRL + V +L M KE +++ L+ G +N+++G ++ MKS
Sbjct: 187 LMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSF 246
Query: 192 GIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV 251
G P ++ + + V GG A + ++ ++ T R+ + + G+ D
Sbjct: 247 GCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPA 306
Query: 252 AR-IWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
A I ++ +S +P + I+A K ++EA F M + YT L+
Sbjct: 307 AEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNG 366
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
A L + ++ +M E+ C +A++ L+ + GE + A L K + P
Sbjct: 367 LAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG-LFKEMKDRGLVP 425
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+Y +++ K G ++FH +++ G V + TL+
Sbjct: 426 NLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLI 469
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 177/426 (41%), Gaps = 19/426 (4%)
Query: 50 LETNKKLDFIER--DYASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVA 105
LE KK + I Y + +D + K L +A S ++++ + V Y +L+A+
Sbjct: 551 LEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYK 610
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADVLLLMEKENVKLTQF 163
+ +++ +F+ M KG V + L+I L K D + DV M++E ++
Sbjct: 611 RDQEEESLSLFDEMVRKGC-VADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLG 669
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+YK L+ + + Q+ ++ + PD+ I+ V R ++A ++ M
Sbjct: 670 NYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM 729
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVC--MAAIEAWGKLNKV 280
+ N+ +T LL + G+ ++ ++ K+ E DV + ++ GK K+
Sbjct: 730 KNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKL 789
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
A +F+ M+K Y++L+ + + + GC + +L
Sbjct: 790 SHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSL 849
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ + G V++A L + Q+ + P +Y ++ AK G ++ EK+ M +VG
Sbjct: 850 IDSFGKKGMVDRALE-LFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908
Query: 401 YVARFKQFQTLVQAY--INAKTPAYGIRDRMRADNVFPN----KALAAQVAQVDAFRKTA 454
V + L+ + A RM+ + P+ +L + +VD +
Sbjct: 909 CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEAC 968
Query: 455 VSELLD 460
EL D
Sbjct: 969 --ELFD 972
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 147/356 (41%), Gaps = 21/356 (5%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-------- 143
G + L+ V N+ +A + FN MK+ C+ ++ Y L
Sbjct: 321 GVHTFTVLIDALVKSGNIDEACKFFNGMKN-------LRCSPNVVTYTTLVNGLAKAGRL 373
Query: 144 KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
++ +V + M++ N +Y LID G++ + + + MK G+ P+ T I+
Sbjct: 374 EEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIM 433
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
GR+ +A + +++ +T L+ + + G+ D+V I K E
Sbjct: 434 ISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIK--EMVEK 491
Query: 264 LDVCMAAIEA-WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
C+ + ++ G +E A+ + S +K L Y L+ + + + + L+
Sbjct: 492 GGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLL 551
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+ M + C + + LV + G +++A S+L + ++Q +P +Y +M + K
Sbjct: 552 EVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG-CEPSVVTYSSLMASFYK 610
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFP 436
R + +F M + G VA + ++ + A + RM+ + + P
Sbjct: 611 RDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEP 666
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/429 (18%), Positives = 156/429 (36%), Gaps = 90/429 (20%)
Query: 69 LIAKLRGLQKAESYIQKIPESFR-GEVVYRTLLANCV----AGNNVKKAEEVFNRMKDKG 123
+I +L G Q+ ++ +Q + ++ G + LL + + + NNV A E+FN+MK
Sbjct: 188 MIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMK--- 244
Query: 124 FPVTSFACN--------------------QLLILYKRLDKKKV----------------- 146
SF CN +I++ +L + ++
Sbjct: 245 ----SFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRS 300
Query: 147 ------ADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQ 200
A+ + M K + ++ +LID +S ++ + MK+ P+ T
Sbjct: 301 GRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTY 360
Query: 201 AILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES 260
L GR E+A + EM+ +N L+ + G+AD ++K +
Sbjct: 361 TTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKD 420
Query: 261 N---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
P L I GK + EA +F + + Y L+ V + K
Sbjct: 421 RGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDK 480
Query: 318 GKDLVKQMAESG--CHI-----------------------------GPLAWDALVKLHVE 346
++K+M E G C I G + ++ L+ +
Sbjct: 481 VLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIH 540
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
G V++A LL+ ++++ P +Y ++D K G + + M + G
Sbjct: 541 NGHVDEAVK-LLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVV 599
Query: 407 QFQTLVQAY 415
+ +L+ ++
Sbjct: 600 TYSSLMASF 608
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 37 RRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPE--SFRGEV 94
+ M +AL+L E ++ + I Y + L +AK L AE ++++ + V
Sbjct: 856 KGMVDRALELFEEMQRRQCPPNI-VTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLV 914
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLLM 153
Y L+ V +AE F RMK+KG L+ ++DK + ++ M
Sbjct: 915 TYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSM 974
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
E+E + +Y +LIDI G++ + + MK +G PD T I+ +
Sbjct: 975 EEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 103/256 (40%), Gaps = 24/256 (9%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIAL-AMANLRTRRMYGKALQLSEWLETNKKLDFIERD 62
PD+ +++L +G LS A I AMA R D +
Sbjct: 771 PDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVP------------------DVVT-- 810
Query: 63 YASCLDLIAKLRGLQKAESYIQK-IPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMK 120
Y+S +D + K +++A + + I + V VY +L+ + V +A E+F M+
Sbjct: 811 YSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQ 870
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ P N LL + + VA+ LL MEK +Y ILID G+ +
Sbjct: 871 RRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVD 930
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ + MK +GI PD T L + + +A + ME + T +L+
Sbjct: 931 EAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLI 990
Query: 240 PLYAELGKADQVARIW 255
+ GK + A I+
Sbjct: 991 DILGRAGKVHEAAMIF 1006
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 106/281 (37%), Gaps = 20/281 (7%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S LD + K L++A + K+ E V Y +L+ G + A +F M
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 121 DKGFPVTSFACNQLLILYKRL-----DKKKVADVLLLMEKENVKLTQFS---YKILIDIK 172
K C ++ Y L + +V + E K + Y LID
Sbjct: 801 KK-------RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF 853
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
G+ + ++ E M+ P+ T L GR AE +L+EME
Sbjct: 854 GKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDL 913
Query: 233 WTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKR 289
T +L+ ++G D+ +K + P + + IE+ GK++K+ EA +F
Sbjct: 914 VTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDS 973
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
M + S Y L+ + + + + +M GC
Sbjct: 974 MEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGC 1014
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/383 (19%), Positives = 151/383 (39%), Gaps = 43/383 (11%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKI 167
V+K++++ KG ++ N ++ Y K+ D V VL +M+K+ V + +Y +
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIE--------------------------------- 194
L+++ ++ ++ +++ + M+ GIE
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 195 --PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
P S T L G AE ++ EM+ + + L+ Y G D+ +
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 253 RIWKLCESNPW-LDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
I+ + E + DV C + +L + +EA+ RM + KLST YT L+ VY
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM 369
+ + K L +M+ G + ++ ++ + + G++++A L + N P
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK-LRANMEANGMDPD 538
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRD 427
+Y ++ ++ ++F M G + ++ A A+G+ D
Sbjct: 539 SYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYD 598
Query: 428 RM-RADNVFPNKALAAQVAQVDA 449
M R NK A + + +
Sbjct: 599 EMKRKGYTIDNKVYTALIGSMHS 621
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/364 (18%), Positives = 151/364 (41%), Gaps = 42/364 (11%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKG 173
VF+ M KG + +C L+ K+ + + ++ M VK+T +S I+++
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
+ ++ ++++ +GI+P++ T + YV E +LK M+ D + ++
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 234 TCRLLLPLYAELGKADQVARIW-KLCESNPWLDV-CMAAIEAWG-KLNKVEEAEAVFKRM 290
T LL+ L + GK +++ ++ E DV ++ +W + ++ A +F +
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
++ S+ Y AL+ + + L+ +M G +I + ++ L+ + G V
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 351 EKADSILLKAQQQNKFKP-MFS----------------------------------SYML 375
++A S++ +Q F+ +F+ SY
Sbjct: 416 DEA-SMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADN 433
++D Y K G++ +++F M G + ++ AY A +R M A+
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 434 VFPN 437
+ P+
Sbjct: 535 MDPD 538
>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
pusilla]
Length = 381
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 125/282 (44%), Gaps = 7/282 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + +A +++ EM+
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMK 67
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 68 TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAK 127
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 188 MIYGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGV 246
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ Y A A+ R + R DN+ + A+
Sbjct: 247 EIDQILFQTMIVXYERAGLIAHAKRLLHELKRPDNIPRDTAI 288
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/358 (17%), Positives = 143/358 (39%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 43 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 102
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 103 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 162
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 222
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A + F+++ T ++
Sbjct: 223 SIWGKVGKLDRAAML--------------------------------FQKLRSTGVEIDQ 250
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 251 ILFQTMIVXYERAGLIAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 306
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 307 AIDAGEVKDITVFERMIHLLSKYKKYANV---VEVFDKMRGLGYFPDSNVIAVVLNAY 361
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 144/345 (41%), Gaps = 7/345 (2%)
Query: 76 LQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
L+KA +I + F+ VV Y T++ + N++ A + + M+ KG S+
Sbjct: 189 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 248
Query: 134 LLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L+ + K ++ + + M + + +Y LID DL + M +G
Sbjct: 249 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 308
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
I P ST +L GR +A+ M+KEM + T +L+ Y+ G A +
Sbjct: 309 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAF 368
Query: 253 RIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
+ S P + I + N+++EA+ +F+++ + A++ +
Sbjct: 369 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGH 428
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM 369
+ + + L+K+M + ++ L++ G+VE+A +LL + KP
Sbjct: 429 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA-RMLLDEMKXRGIKPD 487
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
SY ++ Y +RGDI + M +G+ + L++
Sbjct: 488 HISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 89 SFRGEVVYRTLLANCVAGN----------NVKKAEEVFNRMKDKGFPVTSFACNQLLILY 138
S+R E+V + ++ + N + +A+++ M+ KG + N L+ Y
Sbjct: 299 SYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGY 358
Query: 139 KRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
R + K+ D+ M + ++ T +Y LI + + N + D + E + +G+ PD
Sbjct: 359 SRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDV 418
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI--- 254
+ + + G E+A +LKEM+ ++ T L+ GK ++ AR+
Sbjct: 419 IMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE-ARMLLD 477
Query: 255 -WKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
K P I +G+ +++A V M + Y AL+K ++
Sbjct: 478 EMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQ 537
Query: 314 MLSKGKDLVKQMAESG 329
++L+K+M G
Sbjct: 538 EGDLAEELLKEMVNKG 553
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
L K ++ + M G ++++ ++ + G +E A IL A + +P +Y
Sbjct: 189 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL-DAMRVKGIEPDSYTYG 247
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRAD 432
++ K G + +F +M ++G V + TL+ Y N A+ RD M
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 307
Query: 433 NVFPN 437
+ P+
Sbjct: 308 GIMPS 312
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/407 (18%), Positives = 172/407 (42%), Gaps = 13/407 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVV--YRTLLANCVAGNNVKKAEEVFNRMK 120
Y ++ K + QKAES + + +S R + + +L++ ++A +FN M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 121 DKGFPVTSFACNQLL---ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
G T + N LL + RL++ V V+ ++ K+++ S +++D ++ +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYV--VVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + ++ +MK+ G P ++ + G R AE M+ EME N K
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
+L +Y + + ++++ + P I + + + EE + ++M
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
Y +L+ + K L + + L +++ G + + ++K+ + G KA+
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
LL+ + +P ++ L+M Y+ G+ EK+ ++ + +++ A
Sbjct: 1053 K-LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 415 YINAKTPAYGIRD--RMRADNVFPNKALAAQVAQVDAFRKTAVSELL 459
Y+ +K GI M+ + + P+ + + +F K + +L
Sbjct: 1112 YLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVML 1158
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/338 (17%), Positives = 144/338 (42%), Gaps = 20/338 (5%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
F +Y TLL CVA + +A +VF+ ++ G + C ++++Y +L + A
Sbjct: 678 FGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQ 737
Query: 150 LLLMEKENVKLTQFS----YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
++ + K F+ Y +I+ G+ + VV ++ G PD T L
Sbjct: 738 VV--NQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMS 795
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI--------WKL 257
Y G E+A A+ M D + +LL G+ +++ + +K+
Sbjct: 796 AYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKI 855
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
+S+ L ++A+ + + E + ++ M + + Y ++++ K +
Sbjct: 856 SKSSILL-----MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRD 910
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ +V +M E+ + W++++K++ + +K + + ++ +P ++Y ++
Sbjct: 911 AEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG-LEPDETTYNTLI 969
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Y + + +MR +G + +++L+ A+
Sbjct: 970 IMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA----IEAWGKLNKVEEAEAVFKR 289
C+ ++ +Y +LG + ++ E+ + C IEA+GK ++AE+V
Sbjct: 718 VCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGN 777
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ ++ + K + +L+ YA + + + M G + + L+ G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQ 409
+E+ ++++ Q FK SS +L++D +A+ G+I +KI+ M+ GY+ + ++
Sbjct: 838 LEEL-YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYR 896
Query: 410 TLVQAYINAK 419
+++ K
Sbjct: 897 MMIELLCKGK 906
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 118/310 (38%), Gaps = 39/310 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y TLL+ C +N+ A +VF M
Sbjct: 298 ITYNTLLSACSRDSNLDGAVKVFED----------------------------------M 323
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E + ++Y +I + G+ +++ ++ +G PD+ T L +
Sbjct: 324 EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNT 383
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK----LCESNPWLDVCMA 269
EK + + ++M+ + T ++ +Y + G+ D +++K L NP
Sbjct: 384 EKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTV 443
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I++ GK N+ EA A+ M K + + Y+AL+ YA + +D M SG
Sbjct: 444 LIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
LA+ ++ + + G E KA L + + P ++ Y L++ K
Sbjct: 504 TKPDNLAYSVMLDVLLRGNETRKAWG-LYRDMISDGHTPSYTLYELMILGLMKENRSDDI 562
Query: 390 EKIFHRMRQV 399
+K M ++
Sbjct: 563 QKTIRDMEEL 572
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 136/345 (39%), Gaps = 15/345 (4%)
Query: 107 NNVKKAEEVFNRMKDK-GFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFS 164
N A E+F R + G V + N ++ +Y R K K +++ M + S
Sbjct: 205 NQESLAVEIFTRAEPTVGDRVQVY--NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLIS 262
Query: 165 YKILIDIKGQSNDLTG--MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+ LI+ + +S LT ++++ +++ G+ PD+ T L + A + ++
Sbjct: 263 FNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFED 322
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNK 279
ME + WT ++ +Y G A + R++ E + + + + A+ +
Sbjct: 323 MEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERN 382
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM-AESGCHIGPLAWD 338
E+ + V+++M K Y ++ +Y L L K M SG + + +
Sbjct: 383 TEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYT 442
Query: 339 ALV-KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
L+ L VE A L+ KP +Y ++ YAK G E F M
Sbjct: 443 VLIDSLGKANRTVEAA--ALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML 500
Query: 398 QVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNKAL 440
+ G + ++ + N A+G+ M +D P+ L
Sbjct: 501 RSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTL 545
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 8/133 (6%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
F V Y +LL N +K +EV+ +M+ GF N ++ +Y K+ D+
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY---GKQGQLDL 420
Query: 150 LLLMEKENVKLT-----QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
L + K+ L+ +Y +LID G++N ++ M GI+P T + L
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 205 KHYVSGGRKEKAE 217
Y G++E+AE
Sbjct: 481 CGYAKAGKREEAE 493
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/446 (19%), Positives = 180/446 (40%), Gaps = 52/446 (11%)
Query: 21 DLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAE 80
+L ++I + L + +A L EW+ N + ++ D S ++ + K+ G +
Sbjct: 160 ELLESDITGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQS-VEFMVKMLGRESQY 218
Query: 81 SYIQK----IP-ESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL 134
S K IP E + +V T+L K+A E+F +MK+ G T N +
Sbjct: 219 SIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVM 278
Query: 135 LILYKRLDK--KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L +Y ++ + + ++L M + ++ +F+ +I G+ L + + +K G
Sbjct: 279 LDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNG 338
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
+P ++T + + + G +A +LKEME +N + T L+ Y G D+ A
Sbjct: 339 YKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGA 398
Query: 253 RIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
+ S P I A+GK ++A VF +M + + Y +L +
Sbjct: 399 AVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLL 458
Query: 310 ADHKMLSKGKDLVKQMAE---SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN-- 364
S+ +D++K + + +GC + W+ ++ + E G+ + +L + +
Sbjct: 459 GKR---SRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFE 515
Query: 365 --------------------------------KFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
F P ++Y +++ A+RG+ + E +
Sbjct: 516 PDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESV 575
Query: 393 FHRMRQVGYVARFKQFQTLVQAYINA 418
MR+ G+ + L+ Y A
Sbjct: 576 VLDMRKKGFKPNETSYSLLLHCYSKA 601
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLME--- 154
+ NC+ G+++ E FN +K + + + L K LD LL E
Sbjct: 137 FMLNCIVGSSLNDLIEFFNSVKGELLE------SDITGLLKGLDLSGNWERAFLLFEWVW 190
Query: 155 ----KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
EN+K+ S + ++ + G+ + + ++ + + E D + Y
Sbjct: 191 LNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYART 250
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--NPWLD--- 265
G+ ++A + ++M+ L T ++L +Y ++G+A + I +L + + L+
Sbjct: 251 GKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRA--WSMILELLDEMRSKGLEFDE 308
Query: 266 -VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
C I A G+ ++EA F + K T Y ++L+V+ + ++ +++K+
Sbjct: 309 FTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKE 368
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M ++ C + ++ LV +V G ++ ++ + P +Y +++ Y K G
Sbjct: 369 MEDNNCEPDAITYNELVAAYVRAGFHDEGAAV-IDTMASKGVMPNAITYTTVINAYGKAG 427
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLV 412
D ++F +M+++G V + ++
Sbjct: 428 DADKALEVFGQMKELGCVPNVCTYNNVL 455
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/330 (19%), Positives = 139/330 (42%), Gaps = 5/330 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKK-KVADVLLL 152
+ + T+LA C K +V MK+ GF N L+ Y R + VA +
Sbjct: 484 ITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGE 543
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M +Y L++ + + + VV M+ +G +P+ ++ ++L Y G
Sbjct: 544 MVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGN 603
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LD--VCMA 269
E + E+ ++ R L+ + + + R + ++N + LD V +
Sbjct: 604 VRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVVINS 663
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ + + K+E+A + + + + + Y +L+ +YA K ++++K + SG
Sbjct: 664 MLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
++++ ++K + G V++A I L N +P ++ M YA G
Sbjct: 724 ISPDVVSYNTVIKGFCKKGLVQEAIRI-LSEMTANGVQPCPITFNTFMSCYAGNGLFAEA 782
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+++ M + G + ++ ++ YI AK
Sbjct: 783 DEVIRYMIEHGCMPNELTYKIVIDGYIKAK 812
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
C +RGL+K E I F ++ RTL+ +K E F+++++ G+
Sbjct: 597 CYSKAGNVRGLEKVEMEIYD-GHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYK 655
Query: 126 VTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+ N +L ++ R K +K ++L ++ ++ +Y LID+ + D +++
Sbjct: 656 LDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEM 715
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
++ +++ GI PD + + K + G ++A +L EM + ++ T + YA
Sbjct: 716 LKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAG 775
Query: 245 LG---KADQVAR 253
G +AD+V R
Sbjct: 776 NGLFAEADEVIR 787
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 154/367 (41%), Gaps = 23/367 (6%)
Query: 40 YGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRG------E 93
Y +A+++ E ++ LD Y LD+ K+ +A S I ++ + R E
Sbjct: 253 YKRAIEIFEKMK-ETGLDPTLVTYNVMLDVYGKM---GRAWSMILELLDEMRSKGLEFDE 308
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLL 152
T+++ C + +A F+ +K G+ P T+ + L + K + ++L
Sbjct: 309 FTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKE 368
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME N + +Y L+ ++ V++ M S+G+ P++ T + Y G
Sbjct: 369 MEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGD 428
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
+KA + +M+ + T +L L + +++ + +I LC+ L+ C
Sbjct: 429 ADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKI--LCDMK--LNGCPPDRI 484
Query: 273 AW-------GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
W G+ K + V + M + + + L+ Y + +M
Sbjct: 485 TWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEM 544
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+G ++AL+ G + A+S++L +++ FKP +SY L++ Y+K G+
Sbjct: 545 VAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKG-FKPNETSYSLLLHCYSKAGN 603
Query: 386 IHSTEKI 392
+ EK+
Sbjct: 604 VRGLEKV 610
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 140/339 (41%), Gaps = 10/339 (2%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK----KKVADVLLLMEKENVKLTQFS 164
+ KA ++ MK +G N L+ Y ++ K K +L M + + + +
Sbjct: 179 LNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVT 238
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
+ ILID + +++ +V M +G++P+ T L + G+ +A A+ +M
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMV 298
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVE 281
LK + T LL + + Q ++ P + I+A+ K +E
Sbjct: 299 NSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENME 358
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+A A+++ M Y L+ L ++LV +M + ++ L+
Sbjct: 359 DAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILI 418
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
GE++KA LL + KP +Y ++D Y K G++ + + +M +VG
Sbjct: 419 DSLCNKGEMKKALR-LLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGR 477
Query: 402 VARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNK 438
+A + L++ + + A G+ + M + PN+
Sbjct: 478 LANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNR 516
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 128/313 (40%), Gaps = 12/313 (3%)
Query: 114 EVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIK 172
E F R D G ++ +CN L+ L K + + V M + ++ T S+ I+I+
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG---GRKEKAEAMLKEMEGDNLK 229
+ L ++E MK G+ + T L Y G+ KA+A+LKEM D +
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWKLCESN-----PWLDVCMAAIEAWGKLNKVEEAE 284
+ T +L+ + + +++ E N P + + I KV EA
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFA--EMNRQGVKPNVVTYNSLINGLCNNGKVNEAT 291
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
A+ +M + K + + ALL + +KM+ + +L M + G ++ L+ +
Sbjct: 292 ALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAY 351
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
+ +E A + L + P S+Y ++ ++GD+ + + M A
Sbjct: 352 CKDENMEDAFA-LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410
Query: 405 FKQFQTLVQAYIN 417
+ L+ + N
Sbjct: 411 LITYNILIDSLCN 423
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 105/271 (38%), Gaps = 4/271 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLL 152
V Y +L+ V +A + ++M + N LL + K K+ ++
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K+ + +Y ILID + ++ + M +G+ PD ST L G
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMA 269
E A ++ EM+ +LK T +L+ G+ + R+ ++C P
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + K + A + +M K + + Y L+K + L L+ +M E G
Sbjct: 452 MIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKG 511
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+ ++ + + +E G V + L K
Sbjct: 512 LIPNRMTYEIVTEEMMEKGFVPDIEGHLYKV 542
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 155/391 (39%), Gaps = 9/391 (2%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y +D K L++A I+K+ E V Y T++ V++A +FN M+
Sbjct: 83 YNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEME 142
Query: 121 DKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
G + N +++ L ++ + V ME ++ +SY ILID ++ L
Sbjct: 143 RLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLN 202
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
++ M GI P + T ++ ++A + K M + R+T +L+
Sbjct: 203 EAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI 262
Query: 240 PLYAELGKADQVARIWK-LCESNPWLDVCMAA--IEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ + GK D+ R+ K + + DV + I + +V++A + + M K K
Sbjct: 263 DAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ L+ + + ++++ M SG + ++ LV H G+ E+A
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE- 381
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
LL P +Y ++ K + +F +M+ G + L+ +
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 441
Query: 417 NAKTPAYGIR--DRMRADNVFPNKALAAQVA 445
+A G++ M + P+ + +A
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLA 472
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 118/322 (36%), Gaps = 44/322 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y +D +AK L A QK+ S V Y +L+ N+ A E+F M
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
+G P + +Y ++ID + L
Sbjct: 73 RRGCPPSPV----------------------------------TYNVIIDASCKRGMLEE 98
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+++ M +G PD T + GR E+A + EME +R + ++
Sbjct: 99 ACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIIL 158
Query: 241 LYAELGKADQVARIWKLCES-----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ K DQ +++ E+ + W + I+ K K+ EA +F+RM +
Sbjct: 159 GLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL--IDGLAKAGKLNEAYKLFRRMLDSGI 216
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
S Y ++ L + +L K M GC ++ L+ H + G++++A
Sbjct: 217 TPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFR 276
Query: 356 ILLKAQQQNKFKPMFSSYMLIM 377
LLK + P +Y ++
Sbjct: 277 -LLKRMTDDGHVPDVVTYSTLI 297
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 1/142 (0%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+ K K+ +A +F+++ + ST YT+L+ ++L M GC
Sbjct: 17 IDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGC 76
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
P+ ++ ++ + G +E+A L+K ++ P +Y +MD K G +
Sbjct: 77 PPSPVTYNVIIDASCKRGMLEEACD-LIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEAL 135
Query: 391 KIFHRMRQVGYVARFKQFQTLV 412
+F+ M ++G + T++
Sbjct: 136 LLFNEMERLGCTPNRRSHNTII 157
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 141/356 (39%), Gaps = 16/356 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
+ TL+ V A + +RM + GF +L ++ K ++L
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME+ N+KL Y I+ID + L + M+ +G + D T L + + GR
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK---ADQVARIWKLCESNPWLDVCMA 269
+ +L++M + + T +L+ + + GK ADQ+ + P +
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + K N++EEA + M + L+ Y + G +L ++M+ G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ LV+ + G++E A L + + +P SY +++D G++
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKK-LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINA-----------KTPAYGIRDRMRADNV 434
+IF ++ + + ++ NA P G++ RA N+
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 141/338 (41%), Gaps = 47/338 (13%)
Query: 51 ETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIP-ESFRGEVV-YRTLLAN-CVAGN 107
E N KLD ++ Y+ +D + K L A + ++ + F+ +++ Y TL+ C AG
Sbjct: 256 ERNIKLDAVK--YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 108 NVKKAEEVFNRMKDKGFP-VTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSY 165
A+ + + +K K P V +F+ L+ + + K + AD LL M + + +Y
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSV--LIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
LID + N L Q+V+ M S+G +PD T IL Y R + + +EM
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWK--------------------LCESNPW-- 263
+ + T L+ + + GK + ++++ LC++
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 264 --------------LDVCMAAIEAWGKLN--KVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
LD+ + I G N KV++A +F + KL + Y ++
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
LSK L ++M E G L ++ L++ H+
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHL 589
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 87/212 (41%), Gaps = 20/212 (9%)
Query: 218 AMLKEMEGDNLKEHRWT----------CRLLLPLYAELGKADQVARIWKLCESNPWLD-V 266
A+ K+ME + +T CR L ++ +GK ++ N L+ +
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
C+ +V EA + RM + K + L+ + +S L+ +M
Sbjct: 169 CLEC--------RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
E+G + + ++ + + G+ A +L K +++N K Y +I+D K G +
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN-IKLDAVKYSIIIDGLCKDGSL 279
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ +F+ M G+ A + TL+ + NA
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 154/380 (40%), Gaps = 77/380 (20%)
Query: 100 LANCVAG-NNVKKAEEVFNRMKDKGF--------PVTSFACNQLLILYKRLDKKKVADVL 150
A C+ G +KA ++ M KGF V +F C KR+DK L
Sbjct: 423 FARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQA-----KRVDKA----FL 473
Query: 151 LL--MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
L M+K V ++Y ILID ++ + + M+S G P+ T L Y+
Sbjct: 474 LFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYL 533
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL-------------PLYAEL-GKADQV--- 251
+ +A + M GD + T L+ +YA+L G +D +
Sbjct: 534 KSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESD 593
Query: 252 -------------------ARIWKLC------ESNPWLDVCMAA------------IEAW 274
A + LC +++ LD +AA ++ +
Sbjct: 594 FYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGF 653
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL-KVYADHKMLSKGKDLVKQMAESGCHIG 333
K+ +++ A+ VF RM+K S YT+L+ +++ D + L ++ QM + C+
Sbjct: 654 CKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR-LDLAMKVLSQMLKDSCNPN 712
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+ + A+V + GE EKA + LL ++ P +Y ++D K G + + ++F
Sbjct: 713 VVTYTAMVDGLCKTGETEKALN-LLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771
Query: 394 HRMRQVGYVARFKQFQTLVQ 413
+M+ G + ++ L+
Sbjct: 772 MQMKTKGCAPNYVTYRILIN 791
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 103/476 (21%), Positives = 180/476 (37%), Gaps = 78/476 (16%)
Query: 56 LDFIER-----DYASCLDLIAKLRG---LQKAESYIQKI-PESFRGEVV-YRTLLANCVA 105
LD +ER D C +I+ L +A S++ ++ S+ VV YRTLL +
Sbjct: 259 LDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLK 318
Query: 106 GNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFS 164
+ + + N M +G + N L+ Y + A L M
Sbjct: 319 KKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVV 378
Query: 165 YKILI-DIKGQSN-------DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
Y I I I G+ DL ++V E M + A A+ G+ EKA
Sbjct: 379 YNIFIGSICGREELPNPELLDLA--EKVYEEMLVASCVLNKINTANFARCLCGVGKFEKA 436
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEA 273
++KEM T ++ + + D+ ++ K NP + I++
Sbjct: 437 FQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDS 496
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+ K +E+A++ F M + YTALL Y K L + D+ +M C+
Sbjct: 497 FCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPN 556
Query: 334 PLAWDALVKLHVEGGEVEKA-------------------------DSI------------ 356
+ + AL+ + GE++KA D+I
Sbjct: 557 AITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVN 616
Query: 357 -LLKAQQQNKFKPMFSS------------YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
L KAQ+ + + + Y ++D + K G+I S +++F RM + GY+
Sbjct: 617 GLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLP 676
Query: 404 RFKQFQTLV-QAYINAKTP-AYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSE 457
+ +L+ + + + + A + +M D+ PN + A VD KT +E
Sbjct: 677 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPN--VVTYTAMVDGLCKTGETE 730
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 48/298 (16%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF-----PVTSF------------------ 129
++VY L+ + A+EVF RM G+ TS
Sbjct: 643 QIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Query: 130 -----ACNQLLILYKRL--------DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
+CN ++ Y + + +K ++L LMEK+ +Y LID G++
Sbjct: 703 QMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAG 762
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN----LKEHR 232
+ ++ MK++G P+ T IL H + G + A +L EM+ + L+ +R
Sbjct: 763 KVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYR 822
Query: 233 WTCRLLLPLY-AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRM- 290
T + + A LG +++ ++ P V I+++ K ++E A + K M
Sbjct: 823 TTVQGFSKRFLASLGLLEEMESH----DTAPIAPVYGMLIDSFSKAGRLETALELHKEMM 878
Query: 291 --SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
S + S +T+L++ + + L +M G A+ LVK +E
Sbjct: 879 EVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIE 936
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 150/367 (40%), Gaps = 15/367 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
VVY +L+ +K+A E F M+ +G + N L+ R K+V L L
Sbjct: 182 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 241
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M F++ ILID + + Q++E M +G EPD T L G+
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
E A + + + +K + ++ +L+ Y + K D+ R+++ P
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A + +V A+ +F M + L Y LL + L + DL + + ++
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421
Query: 330 CHIGPLAWDALVKLHVEGGEVEKA----DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ L+ G++E+A D I +N +P +Y ++++ +G
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEI-----SKNGLEPDTIAYNILINGLCNKGM 476
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPNKALAAQ 443
+ K+ +M + G + F ++Q + N A + + MR N P++A+ +
Sbjct: 477 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM 536
Query: 444 VAQVDAF 450
+ + +F
Sbjct: 537 LLCLASF 543
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 128/290 (44%), Gaps = 17/290 (5%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL---LILYKRL-D 142
P++F + L+ V +A+++ M KG N L L L +L D
Sbjct: 249 PDAF----TFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLED 304
Query: 143 KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAI 202
K+ + L +KL FSY ILI+ + + ++ E M+ +G++P + T
Sbjct: 305 ATKLFESL---ADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361
Query: 203 LAKHYVSGGRKEKAEAMLKEME--GDNLKEHRWTCRLLLPLY--AELGKADQVARIWKLC 258
L GR A+ + EM+ G LK + C LL L L +A + + K
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTY-CVLLDGLCKNGHLEEAIDLFQSIKKT 420
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
E P ++V ++ + K+EEA F +SK + T Y L+ + MLS+
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 480
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
L+ QM E GC + ++ +++ ++ E+ +A +L + + +N F P
Sbjct: 481 VKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN-FSP 529
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 132/346 (38%), Gaps = 39/346 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRMK 120
++ + ++K R +A+S+ + + F +VV T L + C AGN + +AE VF MK
Sbjct: 219 FSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGN-ISEAERVFGEMK 277
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G ++ ++Y I+ID +S +T
Sbjct: 278 MAG----------------------------------IQPNVYTYSIVIDALCRSGQITR 303
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
V M G +P++ T L + +V GR EK + +M+ T L+
Sbjct: 304 AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIE 363
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ ++ +I + L+ KL V A +F +M + +
Sbjct: 364 SHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPN 423
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T Y L++++AD K L K+M E+ + L+ G A S
Sbjct: 424 TVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFK 483
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
+ ++ +P Y +++ Q K G + E++ +M G+V R
Sbjct: 484 EMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTR 529
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 103/239 (43%), Gaps = 9/239 (3%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +ID+ G+ Q+++ MK+ +E T IL + YV G +A ME
Sbjct: 149 YMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRME 208
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEE 282
K + +++ ++ +A + + + P + V + + W + + E
Sbjct: 209 DYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISE 268
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE VF M + + Y+ ++ +++ D+ +M + GC + ++ L++
Sbjct: 269 AERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMR 328
Query: 343 LHVEGGEVEKADSILLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+HV+ G EK +L+ Q K P +Y +++ + + ++ KI + +++
Sbjct: 329 VHVKAGRTEK----VLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK 383
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 9/261 (3%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
V + M+S+GI PDSS +L Y G+ + A+ L E+ +K + LL +
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLV 190
Query: 244 ELGKADQVARIWKLCESNPWL--DVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLST 299
+ D+ +++ P+ DV I G ++ ++++A F+ M
Sbjct: 191 KQNLVDEAVLLFRE-HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDI 249
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQ-MAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
Y L+ + +SKG DL+K+ M G + + +++ + + G++ KA S L
Sbjct: 250 VSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDM-KAASELF 308
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ KP ++ +++D + K G++ S ++ +M +G + F +L+ Y
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368
Query: 419 KTPAYGIR--DRMRADNVFPN 437
G++ + M+ N+ PN
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPN 389
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 91/250 (36%), Gaps = 7/250 (2%)
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
IK S+ L G+ + I +T +L ++ G + A+ + M D +
Sbjct: 83 IKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILP 142
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCES-----NPWLDVCMAAIEAWGKLNKVEEAEA 285
LL+ YA +GK D +P+ V + K N V+EA
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF--VYNNLLNMLVKQNLVDEAVL 200
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+F+ + + + L++ + K + + M GC ++++ L+
Sbjct: 201 LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 260
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
E+ K +L + P +Y I+ Y K GD+ + ++F M G
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320
Query: 406 KQFQTLVQAY 415
F L+ +
Sbjct: 321 FTFNVLIDGF 330
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 117/301 (38%), Gaps = 7/301 (2%)
Query: 70 IAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNR-MKDKGFPV 126
+ ++ + KA + Q + F V Y TL+ N + K ++ M KG
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSP 283
Query: 127 TSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
++ Y +L D K +++ M +K F++ +LID G+ ++ +
Sbjct: 284 DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE- 244
E M G PD T L Y G + + +EM+ NL + +T +L+ +
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Query: 245 --LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
+ +A R K E P + I+ + K KV+EA + M + + +
Sbjct: 404 NRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITF 463
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
T L+ + + +M E C + ++L+ ++ G +A I A Q
Sbjct: 464 TILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQ 523
Query: 363 Q 363
+
Sbjct: 524 K 524
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 10/301 (3%)
Query: 132 NQLLILYKRLDKKKVADVLLLMEKENVKLT-QFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
N+L+ R+ K A +LL +N L + +Y IL+D + L + +M S
Sbjct: 409 NELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 468
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM--EGDNLKEHRWTCRLLLPLYAELGKA 248
G+EPD T L GR E+A +L M +G +L E +T L+ + ++GKA
Sbjct: 469 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT--ALIDGHCKIGKA 526
Query: 249 DQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
V +++ N L ++A GK K+ EA A+ +M K S +T L
Sbjct: 527 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 586
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
++ + + ++++M ++GC + ++ G VE+A++IL +
Sbjct: 587 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF-SMSSFG 645
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
P +Y +++ + K G + +I M + G + L+ ++ + T A G
Sbjct: 646 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT-AIGA 704
Query: 426 R 426
R
Sbjct: 705 R 705
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 43/359 (11%)
Query: 63 YASCLDLIAKLR-GLQKAESYIQKIPESF-RGEVVYRTLLANCVAGNNVKKAEEVFN-RM 119
Y++ L +AKL G Y + + E F G + YRT++ N + N +A E+F ++
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVV-NALCKNGFVQAAEMFCCKV 220
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK----ENVKLTQFSYKILIDIKGQS 175
GF + + C L++ R D + + + EK EN + +Y ILI ++
Sbjct: 221 LRLGFGLDTHVCTSLVLANCRRDD--LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEA 278
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L Q+ + M +G +P + T +L K G +KA ML EM + T
Sbjct: 279 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 338
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+L I +LC K+EEA VF++M K
Sbjct: 339 TIL---------------IDRLCRE-----------------GKIEEANGVFRKMLKHGL 366
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ AL+ Y + L+ M + C ++ L++ + KA
Sbjct: 367 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA-F 425
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+LL+ N P +Y +++D + K G ++ IF+ M G F L+
Sbjct: 426 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 484
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 126/298 (42%), Gaps = 26/298 (8%)
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
VL M + + + +SY IL+D + L+ +V MK G+ PD+ T L Y
Sbjct: 348 VLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYC 407
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD-- 265
S G+ + A+++L+EM +N + +TC +LL +G+ + + K+ E LD
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTV 467
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV--- 322
C ++ ++++A + K M +V+ + + G +
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGM----------------RVHGSAALGNLGNSYIGLV 511
Query: 323 -KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ E+ C + + L+ + G +A ++ + + K +P +Y + + +
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGE-KLQPDSLAYNIFIHHFC 570
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPN 437
K+G I S ++ M + G + + +L+ N +G+ D MR + PN
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPN 628
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 138/328 (42%), Gaps = 23/328 (7%)
Query: 87 PESFRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KK 144
PE++ ++ R L ++CV A E+F+ M +KG F L+ Y +
Sbjct: 145 PETYTFNLLIRALCDSSCV-----DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDI---KGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
K ++L ME V + Y ++ +G+++D +++VE M+ EG+ PD T
Sbjct: 200 KGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDD---SEKLVEKMREEGLVPDIVTFN 256
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNL----KEHRWTCRLLLPLYAELGKADQVARIWKL 257
G+ A + +ME D + + T L+L + ++G + +++
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES 316
Query: 258 CESNPWLDVCMAAIEAW----GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
N L V + + W + K EAE V K+M S Y L+
Sbjct: 317 IRENDDL-VSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLG 375
Query: 314 MLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSY 373
MLS K +V M +G + + L+ + G+V+ A S+L + + N ++
Sbjct: 376 MLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 374 MLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+L+ + G I E++ +M + GY
Sbjct: 436 ILLHSLW-NMGRISEAEELLRKMNEKGY 462
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 148/353 (41%), Gaps = 31/353 (8%)
Query: 65 SCLDLIAKLRGLQKAESYIQ----KIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
S + + AK + KA Q + PE+ G +Y LL +C+ V+ ++ M
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMV 139
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVAD----VLLLMEKENVKLTQFSYKILIDIKGQSN 176
G ++ N +L + L D + M ++ K +F++ IL+ ++
Sbjct: 140 LCGISPETYTFN---LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG 196
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+++ +M+S G+ P+ + + GR + +E ++++M + L T
Sbjct: 197 LTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFN 256
Query: 237 LLLPLYAELGKADQVARIWKLCESNPWLDVCMA-------AIEAWGKLNKVEEAEAVFKR 289
+ + GK +RI+ E + +L + ++ + K+ +E+A+ +F+
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES 316
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP------LAWDALVKL 343
+ + +S + Y L+ H + + ++KQM + G IGP + D L KL
Sbjct: 317 IRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKG--IGPSIYSYNILMDGLCKL 374
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
G + A +I + ++N P +Y ++ Y G + + + + M
Sbjct: 375 ----GMLSDAKTI-VGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM 422
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 65/156 (41%), Gaps = 1/156 (0%)
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
E+ P + + +E+ + +VE ++K M T + L++ D +
Sbjct: 107 ENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAA 166
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
++L +M E GC + LV+ + + G +K LL + + P Y I+
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE-LLNSMESFGVLPNKVVYNTIVS 225
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ + G +EK+ +MR+ G V F + + A
Sbjct: 226 SFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISA 261
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 122/312 (39%), Gaps = 37/312 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
+ Y TLL +A+ +F M + S A N + + + K A VL
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
MEK+ + +Y LI G N + + +++ M+ +GI P+ T ++ GG+
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGK 644
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
E A +L EM N+ + ++ + L+ + ++ D +++ A+
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFE------------TAVS 692
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
G + E ++ M + LL L K +L++ + + G +
Sbjct: 693 ICG------QKEGLYSLM-----------FNELLAA----GQLLKATELLEAVLDRGFEL 731
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQN-KFKPMFSSYMLIMDQYAKRGDIHSTEK 391
G + LV + E+E A IL K + F P ++ M ++D K G+
Sbjct: 732 GTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDP--AALMPVIDGLGKMGNKKEANN 789
Query: 392 IFHRMRQVGYVA 403
+M ++ V
Sbjct: 790 FAEKMMEMASVG 801
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 129/294 (43%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K GI PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLYDYSKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRMVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L+ +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ ++ ++ + E EKA++ L++ +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNTMMMIYGKTLEHEKANN-LIQEMHSRGIEPNAITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G +QT++ AY A A+ R + R DN+ + A+
Sbjct: 274 AMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 327
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 144/360 (40%), Gaps = 48/360 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYIQK------IPESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y S +++ K + ++A S I + +P++ V Y TLL V +A VF
Sbjct: 82 YNSMINVFGKAKLFREARSLISEMRMVGVVPDT----VSYSTLLTMYVENQKFLEALSVF 137
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQS 175
M++ + CN ++ +Y +LD K AD L M K ++ SY L+ + G +
Sbjct: 138 AEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDA 197
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
+ M+ + IE + T + Y EKA +++EM ++ + T
Sbjct: 198 ELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITY 257
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ I WGK+ K++ A +F+++ +
Sbjct: 258 STI--------------------------------ISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
++ Y ++ Y +++ K L+ ++ + D + + G +E+A
Sbjct: 286 EIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATW 341
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ +A + K + + + ++D ++K + ++F +MR +GY ++ AY
Sbjct: 342 VFRQAIDAGEVKDI-TVFERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAY 400
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 145/350 (41%), Gaps = 18/350 (5%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +D + K + + K+E ++++ ++ Y +L+ K++ VF M
Sbjct: 195 YNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMS 254
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
G CN + R ++ K A D+ M + K SY L+
Sbjct: 255 SSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFA 314
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
M+ +V M S+GI P+ IL Y G +KA + ++M+ + T ++
Sbjct: 315 NMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 374
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEA------WGKLNK---VEEAEAVFKRM 290
+G+ D L + N +D+ + EA G N V+ E + + M
Sbjct: 375 SSLCRIGRLDDA-----LHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMM 429
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEV 350
+K K++++++ +++GKD++ M ++G + +++L++ + G +
Sbjct: 430 NKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNM 489
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
E+A + LL A +P Y ++D Y K G I +F M G
Sbjct: 490 EEAFA-LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 538
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 130/317 (41%), Gaps = 13/317 (4%)
Query: 112 AEEVFNRMKDKGFP------VTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFS 164
A E+F RM P T + N L+ Y+R+ + ++A V + + + S
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LID + ++ ++ M + + PD T L K+E +L++M
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVE 281
++ + T L+ Y+ G + R++K S+ P + C + I A + N+++
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + Y+ LL YA + LV M G ++ L+
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI 339
Query: 342 KLHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ G ++KA +L+ QNK P ++ ++ + G + F+ M +G
Sbjct: 340 NAYARCGMMDKA--MLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 397
Query: 401 YVARFKQFQTLVQAYIN 417
++ L+Q N
Sbjct: 398 VPPSEAVYRCLIQGCCN 414
>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 426
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 123/277 (44%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME + V+ Y LI++ + D + + +K GI PD + +
Sbjct: 35 MEHDRVRGDLXLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVVYNSMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLICEMRTXGVMPDTVSYTTLLTMYVENKKFIEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY+D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKD 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A ++ R
Sbjct: 274 AMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKR 310
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/420 (19%), Positives = 185/420 (44%), Gaps = 32/420 (7%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALA-MANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+PD +STL T + +EG + AL+ + + R+ G S +E ++KL
Sbjct: 6 SPDKYTYSTLITHFGKEG----LFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKL---- 57
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
DY+ + + ++L+ S I P+ VVY +++ ++A + M+
Sbjct: 58 CDYSKAISIFSRLK-----RSGIT--PDL----VVYNSMINVFGKAKLFREARSLICEMR 106
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVK--LTQFSYKILIDIKGQSNDL 178
G + + LL +Y +KK + + + E +K L + I+ID+ GQ
Sbjct: 107 TXGVMPDTVSYTTLLTMYVE-NKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMA 165
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
D++ +M+ G+EP+ + L + Y +A + + M+ +++++ T +
Sbjct: 166 KEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSM 225
Query: 239 LPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ +Y + + ++ + + +S P I WGK+ K++ A +F+++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGI 285
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
++ Y ++ Y ++S K L+ ++ + D +++ G +E+A
Sbjct: 286 EIDQVLYQTMIVAYERAGLVSHAKRLLHELKTPD----NIPRDTAIQILAGSGRMEEATW 341
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ +A + K + + + ++D ++K + ++F +MR +GY ++ AY
Sbjct: 342 VFRQAIDAGEVKDI-TVFEQMIDLFSKYRKYSNVVEVFDKMRGLGYFPDSNVIALVLNAY 400
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 98/231 (42%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D ++ L LY+ L
Sbjct: 1 RERALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGD-------LXLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y +++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGITPDLVVYNSMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M G +++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVENKKFIEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAE 198
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 171/386 (44%), Gaps = 21/386 (5%)
Query: 59 IERDYASCLDLIAKLRGL-QKAESYIQKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVF 116
+ Y +DL K L + AE + + + +V + T++ C + ++ +AE +
Sbjct: 270 LSNTYNVLIDLYGKAGRLSEAAEVFAEMLKAGVAVDVWTFNTMIFVCGSQGDLAEAEALL 329
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKG 173
M++KG + N L LY + + + +L + + + + +Y+ L+ +
Sbjct: 330 GMMEEKGVAPDTKTFNIFLSLYA--EARDIGAAVLCYKRIREAGLCPDEVTYRALLGVLC 387
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
+ N + ++ +++ M+ + D + + YV G +KA +LK+ + + E
Sbjct: 388 RKNMVREVEDLIDEMERAFVSVDEHCVPGIVEMYVGEGDVDKAFDLLKKFQVNG--EMSS 445
Query: 234 TCR-LLLPLYAELG----KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
R ++ ++AE G D R L + C I+A+GK ++A ++FK
Sbjct: 446 NIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKRDVLECNVMIKAYGKAKLYDKAISLFK 505
Query: 289 RMSK--TWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
M TW ST Y +L+++ + ++ + DLV +M E G + A++ +
Sbjct: 506 GMKNHGTWPNEST--YNSLVQMLSGADLVDQAMDLVDEMQEVGFKPPCQTFSAVIGCYAR 563
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFK 406
G++ A S+ K + KP Y +++ +A+ G + K FH M + G +
Sbjct: 564 LGQLSDAVSVF-KEMVRTGVKPNEVVYGSLINGFAEHGSLEEALKYFHMMEESGLSSNLV 622
Query: 407 QFQTLVQAY--INAKTPAYGIRDRMR 430
+L+++Y + A I +RM+
Sbjct: 623 VLTSLLKSYCKVGNLEGAKAIYERMK 648
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 147/349 (42%), Gaps = 25/349 (7%)
Query: 67 LDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF 124
L L A+ R + A ++I E+ EV YR LL N V++ E++ + M+
Sbjct: 348 LSLYAEARDIGAAVLCYKRIREAGLCPDEVTYRALLGVLCRKNMVREVEDLIDEMERAFV 407
Query: 125 PVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDI---KG---QSND 177
V ++ +Y D K D+L + N +++ ++D+ KG ++ D
Sbjct: 408 SVDEHCVPGIVEMYVGEGDVDKAFDLLKKFQV-NGEMSSNIRSAIMDVFAEKGLWEEAED 466
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ + + K + +E + ++ K Y +KA ++ K M+ + T
Sbjct: 467 VFYRGRNLAGRKRDVLECN-----VMIKAYGKAKLYDKAISLFKGMKNHGTWPNESTYNS 521
Query: 238 LLPLYAELGKADQVARIWKLCES------NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
L+ + L AD V + L + P A I + +L ++ +A +VFK M
Sbjct: 522 LVQM---LSGADLVDQAMDLVDEMQEVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEMV 578
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
+T K + Y +L+ +A+H L + M ESG + +L+K + + G +E
Sbjct: 579 RTGVKPNEVVYGSLINGFAEHGSLEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLE 638
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
A +I + + + + +I +A G + + F +R++G
Sbjct: 639 GAKAIYERMKNMEGGLDLVACNSMI-GLFADLGLVSEAKLAFENLREMG 686
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 64/355 (18%), Positives = 143/355 (40%), Gaps = 37/355 (10%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S ++ A+ L++A Y + ES VV +LL + N++ A+ ++ RMK
Sbjct: 589 YGSLINGFAEHGSLEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMK 648
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
+ + ACN ++ L+ L A + +E + SY ++ + +
Sbjct: 649 NMEGGLDLVACNSMIGLFADLGLVSEAKLAFENLREMGRADAISYATIMYLYKGVGLIDE 708
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
++ E MK G+ D + + Y + G+ + ++ EM L + T ++L
Sbjct: 709 AIEIAEEMKLSGLLRDCVSYNKVLVCYAANGQFYECGELIHEMISQKLLPNDGTFKVLFT 768
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
+ + G + V + E+ ++ K + + +T
Sbjct: 769 ILKKGGIPTEA----------------------------VAQLESSYQE-GKPYARQTT- 798
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+TAL + H + + + ES + A++ + + G++ KA +I +K
Sbjct: 799 -FTALYSLVGMHNL---ALESAQTFIESEVDLDSSAFNVAIYAYGSAGDINKALNIYMKM 854
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ ++ P +Y+ ++ Y K G + ++I+ ++ + F+ ++ AY
Sbjct: 855 RDEH-LGPDLVTYIYLVGCYGKAGMVEGVKQIYSQLEYGEIESNESLFKAIIDAY 908
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 9/261 (3%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
V + M+S+GI PDSS +L Y G+ + A+ L E+ +K + LL +
Sbjct: 131 VFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLV 190
Query: 244 ELGKADQVARIWKLCESNPWL--DVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLST 299
+ D+ +++ P+ DV I G ++ ++++A F+ M
Sbjct: 191 KQNLVDEAVLLFRE-HLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDI 249
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQ-MAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
Y L+ + +SKG DL+K+ M G + + +++ + + G++ KA S L
Sbjct: 250 VSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDM-KAASELF 308
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ KP ++ +++D + K G++ S ++ +M +G + F +L+ Y
Sbjct: 309 DEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCRE 368
Query: 419 KTPAYGIR--DRMRADNVFPN 437
G++ + M+ N+ PN
Sbjct: 369 GEVNQGLKLWEEMKVRNLSPN 389
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 91/250 (36%), Gaps = 7/250 (2%)
Query: 171 IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKE 230
IK S+ L G+ + I +T +L ++ G + A+ + M D +
Sbjct: 83 IKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILP 142
Query: 231 HRWTCRLLLPLYAELGKADQVARIWKLCES-----NPWLDVCMAAIEAWGKLNKVEEAEA 285
LL+ YA +GK D +P+ V + K N V+EA
Sbjct: 143 DSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPF--VYNNLLNMLVKQNLVDEAVL 200
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+F+ + + + L++ + K + + M GC ++++ L+
Sbjct: 201 LFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFC 260
Query: 346 EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARF 405
E+ K +L + P +Y I+ Y K GD+ + ++F M G
Sbjct: 261 RVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPND 320
Query: 406 KQFQTLVQAY 415
F L+ +
Sbjct: 321 FTFNVLIDGF 330
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 117/301 (38%), Gaps = 7/301 (2%)
Query: 70 IAKLRGLQKAESYIQKIPE--SFRGEVVYRTLLANCVAGNNVKKAEEVFNR-MKDKGFPV 126
+ ++ + KA + Q + F V Y TL+ N + K ++ M KG
Sbjct: 224 LCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSP 283
Query: 127 TSFACNQLLILYKRL-DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
++ Y +L D K +++ M +K F++ +LID G+ ++ +
Sbjct: 284 DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE- 244
E M G PD T L Y G + + +EM+ NL + +T +L+ +
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Query: 245 --LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
+ +A R K E P + I+ + K KV+EA + M + + +
Sbjct: 404 NRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITF 463
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
T L+ + + +M E C + ++L+ ++ G +A I A Q
Sbjct: 464 TILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQ 523
Query: 363 Q 363
+
Sbjct: 524 K 524
>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 426
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 126/288 (43%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNI 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERVGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSXVIALVLNAY 400
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 119/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N++ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y +G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G + L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIALVLNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 10/301 (3%)
Query: 132 NQLLILYKRLDKKKVADVLLLMEKENVKLT-QFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
N+L+ R+ K A +LL +N L + +Y IL+D + L + +M S
Sbjct: 343 NELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 402
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM--EGDNLKEHRWTCRLLLPLYAELGKA 248
G+EPD T L GR E+A +L M +G +L E +T L+ + ++GKA
Sbjct: 403 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT--ALIDGHCKIGKA 460
Query: 249 DQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
V +++ N L ++A GK K+ EA A+ +M K S +T L
Sbjct: 461 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 520
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
++ + + ++++M ++GC + ++ G VE+A++IL +
Sbjct: 521 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF-SMSSFG 579
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
P +Y +++ + K G + +I M + G + L+ ++ + T A G
Sbjct: 580 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT-AIGA 638
Query: 426 R 426
R
Sbjct: 639 R 639
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 139/361 (38%), Gaps = 47/361 (13%)
Query: 63 YASCLDLIAKLR-GLQKAESYIQKIPESF-RGEVVYRTLLANCVAGNNVKKAEEVFN-RM 119
Y++ L +AKL G Y + + E F G + YRT++ N + N +A E+F ++
Sbjct: 96 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVV-NALCKNGFVQAAEMFCCKV 154
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
GF + + C L++ R D DL
Sbjct: 155 LRLGFGLDTHVCTSLVLANCRRD----------------------------------DLG 180
Query: 180 GMDQVVEAM-KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+V E M K E P+S T +IL GR E+A + +EM + T +L
Sbjct: 181 EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 240
Query: 239 LPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
+ ++G D+ ++ K C P + I+ + K+EEA VF++M K
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMATKACV--PNVHTYTILIDRLCREGKIEEANGVFRKMLKH 298
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ AL+ Y + L+ M + C ++ L++ + KA
Sbjct: 299 GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA 358
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+LL+ N P +Y +++D + K G ++ IF+ M G F L+
Sbjct: 359 -FLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417
Query: 414 A 414
Sbjct: 418 G 418
>gi|359477372|ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
[Vitis vinifera]
Length = 881
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 168/409 (41%), Gaps = 74/409 (18%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGE---VVYRTLLANCVAGNNVKKAEEVFN 117
R Y + L AK + +A SY +K+ E+ R E V YRTLL + V +AE + +
Sbjct: 396 RTYNILISLHAKHNNIDRAASYFKKMKEA-RLEPDLVSYRTLLYAFSIRHLVGEAEILVS 454
Query: 118 RMKDKGFPVTSFACNQLLILY-------------KRL-------------------DKKK 145
M ++G + F + L +Y +R ++
Sbjct: 455 EMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYSANIDAYGERGH 514
Query: 146 V--ADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
+ A+ L KE+ KL+ + ++I G SN Q++++M++ G+ PD + L
Sbjct: 515 ILEAEKAFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSL 574
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW 263
+ S KA+ L +M+ L V+ C
Sbjct: 575 IQILASADLPHKAKFYLMKMQETQL----------------------VSDCIPYC----- 607
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
A I ++ KL ++E AE +FK M + Y L+ +AD + + + V
Sbjct: 608 -----AVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVN 662
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
+ +G + + +++L+KL+ + G +E+A K Q ++ P S ++D Y++R
Sbjct: 663 ALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEA-YKMLQASEVGPDVYSSNCMIDLYSER 721
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRDRMR 430
+ E+IF +++ G F F ++ Y I A+ I +MR
Sbjct: 722 SMVKQAEEIFESLKRKGDANEF-SFAMMLCMYKRIGKLKEAFQIVQKMR 769
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 132/319 (41%), Gaps = 27/319 (8%)
Query: 110 KKAEEVFNRMKDKG-FPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKI 167
++A E+F +K KG + + N +L IL K V + M + +Y
Sbjct: 177 ERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMSRGITPVNSTYGT 236
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME-GD 226
LID+ + ++ M +G+EPD T ++ + Y G +KAE K G
Sbjct: 237 LIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLGK 296
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA------IEAWGKLNKV 280
LK+ GK + + ES VC+++ I+ +GK ++
Sbjct: 297 TLKDE--------------GKTSEPTATSAV-ESASQPHVCLSSYTYNTLIDTYGKAGQL 341
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
EA F M + +T + ++ + +H L + L+++M E C ++ L
Sbjct: 342 REASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNIL 401
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ LH + +++A S K ++ + +P SY ++ ++ R + E + M + G
Sbjct: 402 ISLHAKHNNIDRAAS-YFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERG 460
Query: 401 Y-VARFKQFQTLVQAYINA 418
+ F Q L + YI A
Sbjct: 461 LEIDEFTQ-SALTRMYIEA 478
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 169/447 (37%), Gaps = 68/447 (15%)
Query: 34 LRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRG- 92
L+ + + +AL++ EWL+ + Y L ++ K R ES ++ RG
Sbjct: 170 LKEQSCWERALEIFEWLKKKGCYELNVIHYNIMLRILGKARKWHHVESLWDEMMS--RGI 227
Query: 93 ---EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADV 149
Y TL+ G ++A +RM +G ++ YK+ + K A+
Sbjct: 228 TPVNSTYGTLIDVYSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQ 287
Query: 150 LL-------------------------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
+ +V L+ ++Y LID G++ L
Sbjct: 288 FFKNWSLGKTLKDEGKTSEPTATSAVESASQPHVCLSSYTYNTLIDTYGKAGQLREASDT 347
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAE 244
M EGI P++ T + + G+ E+A +++++ME T +L+ L+A
Sbjct: 348 FAWMLREGIIPNTVTFNTMIHICGNHGQLEEAASLMQKMEELRCPPDTRTYNILISLHA- 406
Query: 245 LGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
K N ++ A + FK+M + + Y
Sbjct: 407 -------------------------------KHNNIDRAASYFKKMKEARLEPDLVSYRT 435
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
LL ++ ++ + + LV +M E G I AL ++++E G ++K+ + +
Sbjct: 436 LLYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEG 495
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPA 422
Y +D Y +RG I EK F ++ ++ +F +++AY N A
Sbjct: 496 NMSS--ECYSANIDAYGERGHILEAEKAFLCCKESRKLSVL-EFNVMIKAYGISNRYEKA 552
Query: 423 YGIRDRMRADNVFPNKALAAQVAQVDA 449
+ D M V P+K + Q+ A
Sbjct: 553 CQLIDSMENHGVLPDKFSYNSLIQILA 579
>gi|410110147|gb|AFV61153.1| pentatricopeptide repeat-containing protein 123, partial [Phyla
nodiflora]
Length = 419
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 119/280 (42%), Gaps = 36/280 (12%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y +I++ G++ ++ MK+ G+ P +++ + L YV + +A ++ EM
Sbjct: 66 AYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSVFSEM 125
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
TC +++ +Y +LG A +EA
Sbjct: 126 REXKCLXDLXTCNIMIDVYGQLGMA--------------------------------KEA 153
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+ +F M K + + Y LL+VY D ++ + L + M + +++++ +
Sbjct: 154 DKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMI 213
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 214 YGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEI 272
Query: 404 RFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 273 DQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 312
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 144/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 67 YNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSVFSEMR 126
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 127 EXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 186
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 187 EAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 246
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + VE + +F+ M
Sbjct: 247 SIWGKVGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 280
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 281 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 330
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 331 AIDSGEVKDITVFERMIHLLSKYKKYMNV---VEVFDKMRGLGYFPDSNVIAVVLNAY 385
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 10/301 (3%)
Query: 132 NQLLILYKRLDKKKVADVLLLMEKENVKLT-QFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
N+L+ R+ K A +LL +N L + +Y IL+D + L + +M S
Sbjct: 386 NELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 445
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM--EGDNLKEHRWTCRLLLPLYAELGKA 248
G+EPD T L GR E+A +L M +G +L E +T L+ + ++GKA
Sbjct: 446 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFT--ALIDGHCKIGKA 503
Query: 249 DQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
V +++ N L ++A GK K+ EA A+ +M K S +T L
Sbjct: 504 KDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTIL 563
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
++ + + ++++M ++GC + ++ G VE+A++IL +
Sbjct: 564 IEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILF-SMSSFG 622
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGI 425
P +Y +++ + K G + +I M + G + L+ ++ + T A G
Sbjct: 623 VSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT-AIGA 681
Query: 426 R 426
R
Sbjct: 682 R 682
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 43/359 (11%)
Query: 63 YASCLDLIAKLR-GLQKAESYIQKIPESF-RGEVVYRTLLANCVAGNNVKKAEEVFN-RM 119
Y++ L +AKL G Y + + E F G + YRT++ N + N +A E+F ++
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVV-NALCKNGFVQAAEMFCCKV 197
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK----ENVKLTQFSYKILIDIKGQS 175
GF + + C L++ R D + + + EK EN + +Y ILI ++
Sbjct: 198 LRLGFGLDTHVCTSLVLANCRRDD--LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEA 255
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
L Q+ + M +G +P + T +L K G +KA ML EM + T
Sbjct: 256 GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTY 315
Query: 236 RLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+L I +LC K+EEA VF++M K
Sbjct: 316 TIL---------------IDRLCRE-----------------GKIEEANGVFRKMLKHGL 343
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ AL+ Y + L+ M + C ++ L++ + KA
Sbjct: 344 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKA-F 402
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+LL+ N P +Y +++D + K G ++ IF+ M G F L+
Sbjct: 403 LLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 461
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 130/310 (41%), Gaps = 6/310 (1%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK--KKVADVLLLMEKENVKLTQFSYKI 167
++A +F +M+ G T N +L +Y ++ + K+ +L M ++ +F+
Sbjct: 226 ERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCST 285
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+I G+ L + +KSEG + T L + + G +A ++LKEME +N
Sbjct: 286 VISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNN 345
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAE 284
T L+ Y G ++ A P I A+GK K ++A
Sbjct: 346 CPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKAL 405
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+ F++M ++ + Y A+L + L + D++ M +GC + W+ ++ +
Sbjct: 406 SFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMC 465
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
G + K + + + + F+P ++ ++ Y + G K++ M + G+
Sbjct: 466 GNKG-MHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPC 524
Query: 405 FKQFQTLVQA 414
+ L+ A
Sbjct: 525 VTTYNALLNA 534
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 147/359 (40%), Gaps = 7/359 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + ++ K KA S+ +++ ES Y +L + +++ ++ M+
Sbjct: 388 YTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMR 447
Query: 121 DKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
G S N +L + + K V V M+ + + ++ LI G+
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQI 507
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ ++ E M G P +T L G E AE+++ +M+ K + + L+L
Sbjct: 508 DVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLML 567
Query: 240 PLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
YA+ G + +I + + P + + A K + E F+ K K
Sbjct: 568 NCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYK 627
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ ++L ++A +KM + ++++ + ESG + +++L+ ++ GGE K + I
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
LK Q++ KP SY ++ + ++G + + M G + T V Y
Sbjct: 688 -LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGY 745
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 130/310 (41%), Gaps = 6/310 (1%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK--KKVADVLLLMEKENVKLTQFSYKI 167
++A +F +M+ G T N +L +Y ++ + K+ +L M ++ +F+
Sbjct: 226 ERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCST 285
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
+I G+ L + +KSEG + T L + + G +A ++LKEME +N
Sbjct: 286 VISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNN 345
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAE 284
T L+ Y G ++ A P I A+GK K ++A
Sbjct: 346 CPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKAL 405
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
+ F++M ++ + Y A+L + L + D++ M +GC + W+ ++ +
Sbjct: 406 SFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMC 465
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
G + K + + + + F+P ++ ++ Y + G K++ M + G+
Sbjct: 466 GNKG-MHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPC 524
Query: 405 FKQFQTLVQA 414
+ L+ A
Sbjct: 525 VTTYNALLNA 534
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 147/359 (40%), Gaps = 7/359 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + ++ K KA S+ +++ ES Y +L + +++ ++ M+
Sbjct: 388 YTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMR 447
Query: 121 DKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
G S N +L + + K V V M+ + + ++ LI G+
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQI 507
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ ++ E M G P +T L G E AE+++ +M+ K + + L+L
Sbjct: 508 DVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLML 567
Query: 240 PLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
YA+ G + +I + + P + + A K + E F+ K K
Sbjct: 568 NCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYK 627
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ ++L ++A +KM + ++++ + ESG + +++L+ ++ GGE K + I
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
LK Q++ KP SY ++ + ++G + + M G + T V Y
Sbjct: 688 -LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGY 745
>gi|255661210|gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 129/294 (43%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K GI PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRAGITPDLVAYNSMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + LL +Y E K + ++ ++ E +D+ C
Sbjct: 95 FREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLVDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L+ +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKD 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ ++ ++ + E EKA++ L++ +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNTMMMIYGKTLEHEKANN-LIQEMHNRGIEPNAITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G +QT++ AY A A+ R + R DN+ + A+
Sbjct: 274 AMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 327
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 145/356 (40%), Gaps = 40/356 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +++ K + ++A S I ++ E+ V Y TLL V +A VF M+
Sbjct: 82 YNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMR 141
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ V CN ++ +Y +LD K AD L M K ++ SY L+ + G +
Sbjct: 142 EIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFG 201
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM ++ + T
Sbjct: 202 EAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEPNAIT----- 256
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
Y+ + I WGK+ K++ A +F+++ + ++
Sbjct: 257 --YSTI-------------------------ISIWGKVGKLDRAAMLFQKLRSSGVEIDH 289
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 290 VLYQTMIVAYERAGLVAHAKRLLHELKRPD----NIPRDTAIHILAGAGRIEEATWVFRQ 345
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K + + + ++D ++K + ++F +MR +GY ++ AY
Sbjct: 346 AIDAGEVKDI-TVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVISLVLNAY 400
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ + Y +++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRAGITPDLVAYNSMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M E+G +++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLVD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + +K+F MR+VG + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAE 198
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 153/375 (40%), Gaps = 44/375 (11%)
Query: 103 CVAGNNVKKAEEVFNRM--KDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVK 159
CVA ++ +A + RM + P +F+ N ++ L++ V M V
Sbjct: 168 CVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVA 227
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
Q +Y +ID + DL ++ + M +G +P+ T +L GR ++ A+
Sbjct: 228 PNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRAL 287
Query: 220 LKEME-------------------------------GDNLKEH----RWTCRLLLPLYAE 244
+ EM G++LK+ +TC +LL +
Sbjct: 288 MDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCK 347
Query: 245 LGK---ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
GK A+QV + P + I + ++ ++ A ++F++M +
Sbjct: 348 DGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHIT 407
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y AL+ +M+++ +DLV +M +SG ++ L+ + G++EK ++L Q
Sbjct: 408 YNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQ 467
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
+ K S+ ++ + K G I I M V + + +++ AYI +
Sbjct: 468 DKG-IKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGT 526
Query: 422 --AYGIRDRMRADNV 434
A+ + ++M++ V
Sbjct: 527 EQAFLLVEKMKSSGV 541
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 133/311 (42%), Gaps = 9/311 (2%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVL 150
G LL V KAE+V + G T+ N L+ Y ++ D + +
Sbjct: 334 GAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIF 393
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ +++ +Y LI+ + +T + +V M+ G++P T L Y
Sbjct: 394 EQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRA 453
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESN--PWLDVC 267
G+ EK +L +M+ +K + + ++ + + GK + VA + + + P V
Sbjct: 454 GQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVY 513
Query: 268 MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ I+A+ + E+A + ++M + S Y LLK + + + ++L+ +
Sbjct: 514 NSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTN 573
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF--KPMFSSYMLIMDQYAKRGD 385
G ++++ ++ G+ ++A +L Q+ +K+ +P +Y ++ G
Sbjct: 574 QGLRPDVVSYNTIISACCNKGDTDRALELL---QEMHKYDIRPTLRTYHPLLSALGSAGR 630
Query: 386 IHSTEKIFHRM 396
+H E ++ M
Sbjct: 631 VHDMECLYQHM 641
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 7/311 (2%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLM 153
Y L+ V ++A EV+ M G + + L++ + KR D + V +L M
Sbjct: 287 TYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREM 346
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
E VK +SY I I + GQ+ +++ M++EG +PD T +L + GR
Sbjct: 347 EAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRI 406
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AA 270
A+ + +M+ + K R T LL + + G + V IW +++ + D + A
Sbjct: 407 SDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAV 466
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+A ++ +V EA +F M + Y +L+ + +L K M G
Sbjct: 467 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 526
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHST 389
P + ++ ++ G E +I ++K P + ++ AK G +
Sbjct: 527 K--PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMA 584
Query: 390 EKIFHRMRQVG 400
+++FH ++ +G
Sbjct: 585 KRVFHELKAMG 595
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 142/330 (43%), Gaps = 12/330 (3%)
Query: 94 VVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V Y ++ A C G V +A E+F+ MK KG ++ N L+ + + D+ D L L
Sbjct: 461 VAYTAVIDALCQVGR-VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR--FGDALEL 517
Query: 153 ---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M+ K +++ + I+ G+S + Q E MKS+GI PD +
Sbjct: 518 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 577
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLDVCM 268
GR A+ + E++ + T +++ ++ K D+ +I + + E+N DV
Sbjct: 578 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 637
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ I+ K + +EA +F ++ + + + Y LL + + L+++M
Sbjct: 638 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 697
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
S + ++ ++ + G V A +L + P SSY ++ K
Sbjct: 698 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGLVKEERY 756
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ IF +M++V + + T++ +++
Sbjct: 757 NEAFSIFCQMKKV-LIPDYATLCTILPSFV 785
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 19/265 (7%)
Query: 41 GKALQLSEWLETNKKL-----DFIERDYASCLDLIAKLRGLQKA-ESYIQKIPESFRG-E 93
GK++++ E L+ +++ + Y + + + K R L++A + Y + + F
Sbjct: 926 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 985
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
Y LL + ++ AE +FN M + G N LL ++ + +KV +
Sbjct: 986 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 1045
Query: 153 MEKENVKLTQFSYKILIDI---KGQSND-LTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
M + + SY I+ID GQ ND LT Q++E G+EPD T +L
Sbjct: 1046 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM----GLEPDLITYNLLIDGLG 1101
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LD 265
R E+A ++ EM+ + + +T L+ + GKA + ++++ + W +
Sbjct: 1102 KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1161
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRM 290
A I + + A A + RM
Sbjct: 1162 TYNALIRGYSVSGSTDSAYAAYGRM 1186
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 126/336 (37%), Gaps = 13/336 (3%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKE-NVKLTQFSYKILI 169
+A E+ + K G + + N L+ + +A+ L KE +F+Y +L+
Sbjct: 863 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 922
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D G+S + M +V E M +G E T + V R E+A + +
Sbjct: 923 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 982
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWL-DVCMAAIEAWGKLNKVEEA 283
T LL + G+ + ++ C++N + ++ + G KV
Sbjct: 983 PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH- 1041
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F+ M K YT ++ L+ G +Q+ E G + ++ L+
Sbjct: 1042 --LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 1099
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ +E+A S L Q+ P +Y ++ K G K++ + G+
Sbjct: 1100 LGKSKRLEEAVS-LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKP 1158
Query: 404 RFKQFQTLVQAY-INAKT-PAYGIRDRMRADNVFPN 437
+ L++ Y ++ T AY RM PN
Sbjct: 1159 NVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194
>gi|449017269|dbj|BAM80671.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 686
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 131/337 (38%), Gaps = 65/337 (19%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y ++ CVA +V KA +VF M D
Sbjct: 281 TYNAVMNACVAAGDVDKAHQVFGEMVDA-------------------------------- 308
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + + SY IL+ + + M V++ M++ G P T L K YV+ + E
Sbjct: 309 -QGIAPNEVSYNILLKSHARRGRVEAMQLVLDQMRAAGCAPSLVTYTTLVKGYVTANKLE 367
Query: 215 KAEAML------KEMEGDNLKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNP--- 262
KAE +L K +E D+ H + C LL Y KA ++A + + P
Sbjct: 368 KAEEVLNDILYKKRLEPDS---HLFNC--LLEGYVRANDWKKALKLADTMRQHGTMPDGY 422
Query: 263 ----WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
+ VC+ A + + AE + +RM + L + Y+ ++ Y D L
Sbjct: 423 TNTQLVKVCIQA-------GRFDLAEKIVERMP---RPLPLQIYSMMISGYGDSGRLWSA 472
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN-KFKPMFSSYMLIM 377
L K+M G H A + ++ E A S+ L+ +++ F P Y L++
Sbjct: 473 LRLAKEMRNDGVHENVRTVSAQMSACLQAREPALALSVFLRVMREDPSFVPDQVIYTLLI 532
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
R D+ S +IF ++ Y R + + L++A
Sbjct: 533 RANGLRADVDSAYQIFSLVKTKYYTVRTEVYNALIEA 569
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 247 KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK-HYTAL 305
++D +A L N ++ C+AA V++A VF M + Y L
Sbjct: 269 QSDNLALCPSLRTYNAVMNACVAA-------GDVDKAHQVFGEMVDAQGIAPNEVSYNIL 321
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
LK +A + + ++ QM +GC + + LVK +V ++EKA+ +L + +
Sbjct: 322 LKSHARRGRVEAMQLVLDQMRAAGCAPSLVTYTTLVKGYVTANKLEKAEEVLNDILYKKR 381
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+P + +++ Y + D K+ MRQ G + LV+ I A
Sbjct: 382 LEPDSHLFNCLLEGYVRANDWKKALKLADTMRQHGTMPDGYTNTQLVKVCIQA 434
>gi|410110075|gb|AFV61117.1| pentatricopeptide repeat-containing protein 123, partial
[Burroughsia fastigiata]
Length = 348
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 7/263 (2%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ +KS G PD + + +A +++ EM+ + + + LL +Y
Sbjct: 9 IFSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYSTLLTMYV 68
Query: 244 ELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
E K + ++ ++ E LD+ C I+ +G+L +EA+ +F M K + +
Sbjct: 69 ENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 128
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y L++VY D ++ + L + M + +++++ ++ + E EKA++ L++
Sbjct: 129 SYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANN-LIQE 187
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
Q +P +Y I+ + K G + +F ++R G FQT++ AY A
Sbjct: 188 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGL 247
Query: 421 PAYGIR---DRMRADNVFPNKAL 440
A+ R + R DN+ + A+
Sbjct: 248 VAHAKRLLHELKRPDNIPRDTAI 270
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/362 (18%), Positives = 156/362 (43%), Gaps = 28/362 (7%)
Query: 62 DYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKD 121
DY+ + + ++L K+ Y + V Y T++ ++A + + MK
Sbjct: 2 DYSKAISIFSRL----KSSGYXPDL-------VAYNTMIIVFGKAKLFREARSLISEMKT 50
Query: 122 KGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVK--LTQFSYKILIDIKGQSNDL 178
G + + + LL +Y ++ KK + L + E +K L + I+ID+ GQ
Sbjct: 51 AGVTPNTTSYSTLLTMY--VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMA 108
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
D++ M+ GIEP+ + L + Y +A + + M+ N++++ T +
Sbjct: 109 KEADKLFWGMRKMGIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 168
Query: 239 LPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ +Y + + ++ + + +S P I WGK+ K++ A +F+++ +
Sbjct: 169 IMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGX 228
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
++ + ++ Y +++ K L+ ++ + D + + G +E+A
Sbjct: 229 EIDQILFQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATY 284
Query: 356 ILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ +A + K +F + ++ +Y K ++ ++F +MR +GY ++
Sbjct: 285 VFRQAIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGYFPDSDVIAIVLN 341
Query: 414 AY 415
AY
Sbjct: 342 AY 343
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 163/410 (39%), Gaps = 76/410 (18%)
Query: 28 ALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIP 87
A A LR +R G L +W +KL E+ L+++A P
Sbjct: 10 ARPAAVLRRQRYPG----LDQWAARFRKLTEREKTLPILLEMLAN-------------AP 52
Query: 88 ESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF------PVTSFACNQLLILYKRL 141
G Y L+ C A ++++ ++ + PV + LL Y R
Sbjct: 53 PGPTG-AKYEMLIEQCFEEKRPDLATQLYDHLRAETTTTQAAAPVPLAVFDVLLQGYGRA 111
Query: 142 -DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPD---- 196
D++++A V M + V+ +Y ILID G++ DL M Q E M+ +G+ P+
Sbjct: 112 GDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVY 171
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
+S A L K E+ A ++ GD ++ +R T ++ Y + D++ + +
Sbjct: 172 TSVIATLGK-LGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEALVE 230
Query: 257 LCESNPWLDV----CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADH 312
++P L + A + AW + +V++A F ++ T + S +TA+L +
Sbjct: 231 RMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHML--- 287
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL--LKAQQQNKFKPMF 370
G ++D +L L ++ KP
Sbjct: 288 -----------------------------------GTAGRSDEMLRTLDKMKRLGVKPST 312
Query: 371 SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
+ Y I++ + K +IHS F MR+ G A K + TL+ + AKT
Sbjct: 313 AVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTW--AKT 360
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 90/220 (40%), Gaps = 18/220 (8%)
Query: 115 VFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKG 173
++MK G ++ N ++ + K + + D M ++ V +Y LID
Sbjct: 299 TLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWA 358
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRW 233
++ ++ MK EG++P T A L Y + EK ++ M+ +
Sbjct: 359 KTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNV 418
Query: 234 TCRLLLPLYAELGKADQVARIWKLC----------ESNPWLDVCMAAIEAWGKLNKVEEA 283
LL+ Y +GK ++ ++ LC E+N + V IEAW + +++A
Sbjct: 419 VFNLLIDTYGRMGKPEEAEKV--LCGAMKEYGIALETNNFTSV----IEAWARNGNLDKA 472
Query: 284 EAVFKRMSKTW-KKLSTKHYTALLKVYADHKMLSKGKDLV 322
E RM+ + K K T LL + +G+ ++
Sbjct: 473 EEWLHRMNTDYATKPDIKTLTTLLSFCIPAADVKRGRRVI 512
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 62/350 (17%), Positives = 136/350 (38%), Gaps = 47/350 (13%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF-PVTSFACNQLLILYKRLDKKKVADVL 150
G Y L+ ++++ + + M+++G P + + L K D +
Sbjct: 132 GMSTYTILIDAWGKAGDLRRMWQAWEDMREQGLRPNVVVYTSVIATLGKLGDVAAMERTF 191
Query: 151 LLMEK---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSE-GIEPDSSTQAILAKH 206
M++ + V+ + +Y ++ GQ + M+ +VE M+++ G+ D+ T + +
Sbjct: 192 AEMQRSSGDGVEPNRTTYNAMVHSYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAA 251
Query: 207 YVSGGRKEKAEAMLKEM--EGDNLKEHRWTCRLLLPLYAELGKADQVAR----------- 253
+ GR +KA + G H WT +L + G++D++ R
Sbjct: 252 WSRAGRVDKALEAFDSIAATGGQPSLHAWTA--ILHMLGTAGRSDEMLRTLDKMKRLGVK 309
Query: 254 ------------IWKLCESNPWLDVCMAA---------------IEAWGKLNKVEEAEAV 286
K + +D A I+ W K K EAE
Sbjct: 310 PSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKF 369
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
+ M + + + +L+ Y K L+ +M + G + ++ L+ +
Sbjct: 370 YVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYGR 429
Query: 347 GGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
G+ E+A+ +L A ++ +++ +++ +A+ G++ E+ HRM
Sbjct: 430 MGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKAEEWLHRM 479
>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 574
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 151/346 (43%), Gaps = 17/346 (4%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEKENVKLTQF- 163
N++ A + +MK+ G T+ N L+ Y K + + LL ++E+ NV +
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 164 -SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
++ +L+ + + +VV+ M+ G+ PD+ T +A YV G +AE+ + E
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 223 --MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-----CESNPWLDVCMAAIEAWG 275
+ + K + TC +++ Y G+ R + E+N L V + I +
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEAN--LVVFNSLINGFV 306
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
++ + + V M + K Y+ ++ ++ + K + K+M ++G
Sbjct: 307 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
A+ L K +V E +KA+ +L +++ P + ++ + G + ++F++
Sbjct: 367 AYSILAKGYVRAKEPKKAEELLETLIVESR--PNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 396 MRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKA 439
M + G K F+TL+ Y+ K P A + MR V P +
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENS 470
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ VFK +++T + S YT LL K +V ++ +SG + + ++A++
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
E G +E A LLK ++ P S+Y ++ Y G + ++ M + G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELG-LNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGN 181
Query: 402 V---ARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVA 445
V + F LVQA+ K A+ + +M V P+ +A
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 132/346 (38%), Gaps = 39/346 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRMK 120
++ + ++K R +A+S+ + + F +VV T L + C AGN + +AE VF MK
Sbjct: 184 FSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGN-ISEAERVFGEMK 242
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G ++ ++Y I+ID +S +T
Sbjct: 243 MAG----------------------------------IQPNVYTYSIVIDALCRSGQITR 268
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
V M G +P++ T L + +V GR EK + +M+ T L+
Sbjct: 269 AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIE 328
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ ++ +I + L+ KL V A +F +M + +
Sbjct: 329 SHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPN 388
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
T Y L++++AD K L K+M E+ + L+ G A S
Sbjct: 389 TVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFK 448
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
+ ++ +P Y +++ Q K G + E++ +M G+V R
Sbjct: 449 EMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTR 494
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 55/288 (19%), Positives = 112/288 (38%), Gaps = 28/288 (9%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +ID+ G++ M+ G +PD +++ R +A++
Sbjct: 149 YMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFF---- 204
Query: 225 GDNLKE-------------HRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
D+LK+ H W CR + +A++V K+ P + I
Sbjct: 205 -DSLKDRFEPDVVVYTSLVHGW-CRA-----GNISEAERVFGEMKMAGIQPNVYTYSIVI 257
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+A + ++ A VF M + + L++V+ K + QM GC
Sbjct: 258 DALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCP 317
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+ ++ L++ H +E+A IL ++ SS+ I +K GD++S +
Sbjct: 318 PDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNA--SSFNPIFGCISKLGDVNSAHR 375
Query: 392 IFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
+F +M+ + + L++ + + K+ +R M + + PN
Sbjct: 376 MFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPN 423
>gi|255557939|ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540762|gb|EEF42322.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 138/353 (39%), Gaps = 40/353 (11%)
Query: 91 RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADV 149
R + Y LL V ++ V N MK KGF + SF ++++ LY+ KK +
Sbjct: 124 RNQETYEILLDYNVNAGRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGI 183
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
+ + + + L + Y +ID G+ +L +V+ M+ +GI PD T L + +
Sbjct: 184 IEEIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCK 243
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
G KA + +M+ L ++ AE GK W + N D+
Sbjct: 244 AGNLSKALELFSKMQAQGLYPDPKILVTIISRLAEQGK-------WNIIREN--FDI--- 291
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+++WG +KK S Y L+ +Y + ++ + + G
Sbjct: 292 -MKSWG------------------YKK-SGAIYAILVDIYGQYGRFQDAEECISALKSEG 331
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ L + + G E+ +L + + +P ++++ + G
Sbjct: 332 ILPSASMFCVLANAYAQQGLCEQTVKVL-QLMEAEGIEPNLIMLNVLINAFGIAGRHREA 390
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAK----TPAYGIRDRMRADNVFPNK 438
I+H M++ G + TL++AYI A+ P I M + P+K
Sbjct: 391 LSIYHHMKESGISPDVVTYSTLMKAYIRARKFDEVPE--IYSEMESSGCTPDK 441
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 48/330 (14%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWL-ETNKKLDFIERDYASCLD 68
S + + ++G L+ + + R M+ KA+ + E + E LD + Y S +D
Sbjct: 147 SVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLD--KHIYNSIID 204
Query: 69 LIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLA-NCVAGNNVKKAEEVFNRMKDKG-F 124
K L +A + + + V + +L+ +C AGN + KA E+F++M+ +G +
Sbjct: 205 TFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGN-LSKALELFSKMQAQGLY 263
Query: 125 PVTSFACNQLLILYKRLDKKKVADVLL----LMEKENVKLTQFSYKILIDIKGQSNDLTG 180
P L+ + RL ++ +++ +M+ K + Y IL+DI GQ
Sbjct: 264 PDPKI----LVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYAILVDIYGQYGRFQD 319
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
++ + A+KSEGI P +S +LA Y G E+ +L+ ME + ++
Sbjct: 320 AEECISALKSEGILPSASMFCVLANAYAQQGLCEQTVKVLQLMEAEGIE----------- 368
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
P L + I A+G + EA +++ M ++
Sbjct: 369 ---------------------PNLIMLNVLINAFGIAGRHREALSIYHHMKESGISPDVV 407
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGC 330
Y+ L+K Y + + ++ +M SGC
Sbjct: 408 TYSTLMKAYIRARKFDEVPEIYSEMESSGC 437
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG- 246
M+S G P S + L + +S GR +AEA+ +EM LK ++L + + G
Sbjct: 47 MQSLGFHPSSLSYTCLIETLLSVGRTLEAEALYQEMMCFGLKPRLKLYNIMLRGFLKKGL 106
Query: 247 --KADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH 301
A++V RI L + ++ + G+L E+ +V M + +L++
Sbjct: 107 LRVAERVLRILDDLGLHRNQETYEILLDYNVNAGRL---EDTWSVINEMKQKGFQLNSFV 163
Query: 302 YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ 361
Y+ ++ +Y D+ M K +++++ E G + +++++ + GE+++A +L Q
Sbjct: 164 YSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKHIYNSIIDTFGKYGELDEALEVLSNMQ 223
Query: 362 QQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
QQ P ++ ++ + K G++ ++F +M+ G K T++
Sbjct: 224 QQG-ITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPKILVTII 273
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 74/388 (19%), Positives = 150/388 (38%), Gaps = 54/388 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVYRTLLANCVAGNNVKKAEEVF 116
Y SC+ K+ + KA + + + P S + TLL+ G ++ AE ++
Sbjct: 24 YNSCICDCCKVGDVDKAMTLLADMQSLGFHPSSLSYTCLIETLLS---VGRTLE-AEALY 79
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLLLMEKENVKLTQFSYKILIDIKGQS 175
M G N +L + + +VA+ VL +++ + Q +Y+IL+D +
Sbjct: 80 QEMMCFGLKPRLKLYNIMLRGFLKKGLLRVAERVLRILDDLGLHRNQETYEILLDYNVNA 139
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME--GDNLKEHRW 233
L V+ MK +G + +S + + Y G +KA +++E+ G L +H +
Sbjct: 140 GRLEDTWSVINEMKQKGFQLNSFVYSKVIGLYRDNGMWKKAIGIIEEIREMGMPLDKHIY 199
Query: 234 TCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
+ I+ +GK +++EA V M +
Sbjct: 200 N----------------------------------SIIDTFGKYGELDEALEVLSNMQQQ 225
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE--VE 351
+ +L++ + LSK +L +M G + P ++ E G+ +
Sbjct: 226 GITPDIVTWNSLIRWHCKAGNLSKALELFSKMQAQGLYPDPKILVTIISRLAEQGKWNII 285
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+ + ++K+ +K + Y +++D Y + G E+ ++ G + F L
Sbjct: 286 RENFDIMKSW---GYKKSGAIYAILVDIYGQYGRFQDAEECISALKSEGILPSASMFCVL 342
Query: 412 VQAYINAKTPAYGIR--DRMRADNVFPN 437
AY ++ M A+ + PN
Sbjct: 343 ANAYAQQGLCEQTVKVLQLMEAEGIEPN 370
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 144/349 (41%), Gaps = 37/349 (10%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLLME 154
Y TL+ + A +M++ P + L+ L ++L D + + ++
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAISIFSRLK 71
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + +Y +I++ G++ +V M++ G+ PD+ + L YV +
Sbjct: 72 RSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVENQKFL 131
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAW 274
+A ++ EM TC +++ +Y +LG A
Sbjct: 132 EALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMA-------------------------- 165
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
+EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 166 ------KEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 219
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G + +F
Sbjct: 220 VTYNSMMVIYGKTLEHEKANN-LIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQ 278
Query: 395 RMRQVGYVARFKQFQTLVQAYINAKTPAYG---IRDRMRADNVFPNKAL 440
++R G +QT++ AY A A+ +++ R DN+ + A+
Sbjct: 279 KLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQELKRPDNIPRDTAI 327
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/422 (19%), Positives = 183/422 (43%), Gaps = 36/422 (8%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALA-MANLRTRRMYGKALQLSEWLETNKKLDFIE 60
+PD +STL T + +EG + AL+ + + R+ G + S +E ++KL
Sbjct: 6 SPDRYTYSTLITHFGKEG----LFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLC--- 58
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
DY+ + + ++L+ A V Y +++ ++A + + M+
Sbjct: 59 -DYSRAISIFSRLKRSGIAPDL-----------VAYNSMINVFGKAKLFREARALVSEMR 106
Query: 121 DKG-FPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSN 176
G P T C LL +Y ++ +K + L L M + + I+ID+ GQ
Sbjct: 107 TAGVMPDTVSYCT-LLTMY--VENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLG 163
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
D++ +M+ GIEP+ + L + Y +A + + M+ N++++ T
Sbjct: 164 MAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYN 223
Query: 237 LLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
++ +Y E KA+ + + + P I WGK+ K++ A +F+++ +
Sbjct: 224 SMMVIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCS 283
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
++ Y ++ Y +++ K L++++ + D + + G +E+A
Sbjct: 284 GIEIDQVLYQTMIVAYERAGLVAHAKRLLQELKRPD----NIPRDTAIHILAGAGRIEEA 339
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ +A + + K + + + +++ ++K + ++F +MR +GY ++
Sbjct: 340 TWVFRQAVEAGEVKDI-TVFERMINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLN 398
Query: 414 AY 415
AY
Sbjct: 399 AY 400
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL A ++F R+ ++ Y +++ V
Sbjct: 51 ----------------------IELSRKLCDYSRAISIFSRLKRSGIAPDLVAYNSMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ-QNKFK 367
+ K+ + + LV +M +G +++ L+ ++VE + +A S+ + ++ Q F
Sbjct: 89 FGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVENQKFLEALSLFSEMREIQCSFD 148
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
++ +++D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 --LTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAE 198
>gi|115529193|dbj|BAF34329.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|115529195|dbj|BAF34330.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 513
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 119/272 (43%), Gaps = 4/272 (1%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+ME+ + ++ +LI G++ L + QV++ + G+E D+ + Y S G
Sbjct: 198 IMEERGIPADLGAFTVLIAAYGRAKMLEKVKQVLQDVSLAGLELDAVFYKTVIVAYGSVG 257
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LDVCM 268
++AE +L ME + + + LL Y LG A R++ + L
Sbjct: 258 MPKEAEDVLSSMESAGVPDGKDAYLALLNAYGRLGHASDAQRVFDRMHLKGFRGDLKAFT 317
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A +EA+ AE VF+ + K + +++ VYA ML++ +++ ++ +
Sbjct: 318 ALLEAYSNAQDYANAELVFQSLRAAGLKPDDRALASMVSVYAKANMLNRAAEVIVELEGA 377
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G GP+ +L+ + G VE+A + ++ + +Y + YA+ G++ +
Sbjct: 378 GMRFGPVTLTSLIGWFGKAGLVEEAKHC-FQELKRKRLPISGKAYANMFAAYARAGELET 436
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
I+ + + G ++ + +A + K
Sbjct: 437 AGSIWASIEEAGIELDHRECAVMAEALLAGKV 468
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+ +G+ V EAE +F+ M + +T L+ Y KML K K +++ ++ +G
Sbjct: 180 IDKYGREGNVVEAEQMFRIMEERGIPADLGAFTVLIAAYGRAKMLEKVKQVLQDVSLAGL 239
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + + ++ + G ++A+ + L + + +Y+ +++ Y + G +
Sbjct: 240 ELDAVFYKTVIVAYGSVGMPKEAEDV-LSSMESAGVPDGKDAYLALLNAYGRLGHASDAQ 298
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYG--IRDRMRADNVFP-NKALAAQVA 445
++F RM G+ K F L++AY NA+ A + +RA + P ++ALA+ V+
Sbjct: 299 RVFDRMHLKGFRGDLKAFTALLEAYSNAQDYANAELVFQSLRAAGLKPDDRALASMVS 356
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/291 (19%), Positives = 114/291 (39%), Gaps = 41/291 (14%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL----DKKKVADV 149
V Y+T++ + K+AE+V + M+ G P A LL Y RL D ++V D
Sbjct: 244 VFYKTVIVAYGSVGMPKEAEDVLSSMESAGVPDGKDAYLALLNAYGRLGHASDAQRVFD- 302
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M + + ++ L++ + D + V +++++ G++PD A + Y
Sbjct: 303 --RMHLKGFRGDLKAFTALLEAYSNAQDYANAELVFQSLRAAGLKPDDRALASMVSVYAK 360
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
+A ++ E+EG ++ P V +
Sbjct: 361 ANMLNRAAEVIVELEGAGMR------------------------------FGP---VTLT 387
Query: 270 AIEAW-GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
++ W GK VEEA+ F+ + + +S K Y + YA L + + E+
Sbjct: 388 SLIGWFGKAGLVEEAKHCFQELKRKRLPISGKAYANMFAAYARAGELETAGSIWASIEEA 447
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
G + + + + G E++ I +A Q +K + + + + D+
Sbjct: 448 GIELDHRECAVMAEALLAGKVHEQSVEIFFEALQARGWKSLTAVEVAVADR 498
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 121/277 (43%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD +
Sbjct: 38 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKL 97
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ +L E LD+ C
Sbjct: 98 FREARSLISEMRIAGVMPNTASYSTLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNI 157
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 158 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 217
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 218 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQGRGIEPNSITYSTIISIWGKVGKLDRA 276
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G FQT++ AY A A+ R
Sbjct: 277 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKR 313
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 173/420 (41%), Gaps = 67/420 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 9 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 65
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQ--KIPESFRGEVVYRTLLA 101
++R Y + +++ K + ++A S I +I Y TLL
Sbjct: 66 AISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLT 125
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF+ +++ + CN ++ +Y +L K AD L M K ++
Sbjct: 126 MYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 185
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + IE + T + Y EKA ++
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM----------- 268
+EM+G ++ + T ++ ++ ++GK D+ A ++ KL S +D +
Sbjct: 246 QEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 305
Query: 269 ----------------------AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
AI ++EEA VF+R + + ++
Sbjct: 306 GLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRRAIDAGEVKDITVFERMI 365
Query: 307 KVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
+++ +K + ++ +M G ++ L +A KLH E +KA+S+ ++ Q+
Sbjct: 366 HLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLH----EFDKANSVYMEMQE 421
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 98/234 (41%), Gaps = 33/234 (14%)
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 DEMRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL 53
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
IE KL +A ++F R+ ++ Y A
Sbjct: 54 -------------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAX 88
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 INVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVENKKFLEALSVFSELREMKC 148
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 201
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 180/426 (42%), Gaps = 18/426 (4%)
Query: 23 SRAEIALAMANLRTRRMYGKALQL-SEWLETNKKLDFIERDYASCLDLIAKLRGLQKAES 81
S A + L + +L + + Y LQL SE +E+ + D + Y + KL L++A
Sbjct: 146 SVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPD--QFMYGKAIQAAVKLGDLKRA-- 201
Query: 82 YIQKIPESFRGEVVYRTLLANCVAGN-----NVKKAEEVFNRMKDKGFPVTSFACNQLLI 136
I+ + RG V + N V G +K AE++F+ M D+ N L+
Sbjct: 202 -IELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLID 260
Query: 137 LYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEP 195
Y ++ + + A ++ M+ ENV+ T ++ L++ ++ + +V+E M+ G P
Sbjct: 261 GYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVP 320
Query: 196 DSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW 255
D T L ++ G + + + +E ++ +TC +LL + G ++ +
Sbjct: 321 DRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVL 380
Query: 256 KLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADH 312
K N V + + + ++ + +A ++M + + Y +L+K + +
Sbjct: 381 KKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEM 440
Query: 313 KMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
K + + + +K+M E G ++ L+ + ++ I L+ ++ KP S
Sbjct: 441 KNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQI-LEEMEKKGLKPNVIS 499
Query: 373 YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMR 430
Y +++ K +I E I M G V + + L+ A A+ D M
Sbjct: 500 YGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMV 559
Query: 431 ADNVFP 436
A + P
Sbjct: 560 AREIVP 565
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 141/332 (42%), Gaps = 10/332 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR---LDKKKVADVL 150
V Y +L+ N+++AE+ +M +KG N L+ Y R D+ +L
Sbjct: 428 VTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDR--CFQIL 485
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
MEK+ +K SY LI+ + ++ + ++ M G+ P++ +L
Sbjct: 486 EEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIA 545
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLDVCM- 268
G+ + A EM + T +L+ + GK + + ++ DV
Sbjct: 546 GKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY 605
Query: 269 -AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ I + V++A +++ M K+ K + Y L+ ++ K + ++M +
Sbjct: 606 NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEK-IYQEMLQ 664
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
+ ++AL+ +VE G+V+KA S L A + +P +Y ++ + K G +H
Sbjct: 665 MNLVPDRVIYNALIHCYVEHGDVQKACS-LHSAMEAQGIQPDKMTYNCLILGHFKEGRMH 723
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + + M+ G + + + + L+ + K
Sbjct: 724 KVKNLVNDMKIRGLIPKTETYDILIVGHCKLK 755
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLM 153
+ Y +L++ + NV+KA E++ MK G T L Y RL + L+L+
Sbjct: 603 ITYNSLISGYSSAGNVQKALELYETMKKSGIKPT-------LNTYHRLIAGCGKEGLVLV 655
Query: 154 EKENVKLTQFS-------YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
EK ++ Q + Y LI + D+ + AM+++GI+PD T L
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILG 715
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW--KLCES--NP 262
+ GR K + ++ +M+ L T +L+ + +L D A +W ++ E+ P
Sbjct: 716 HFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDG-AYVWYREMFENGFTP 774
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ +C I + + +A+ + M+ K
Sbjct: 775 SVSICDNLITGLREEGRSHDADVICSEMNMKGK 807
>gi|357519615|ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524118|gb|AET04572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 635
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 134/311 (43%), Gaps = 10/311 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADVLLL 152
VY L++ ++ A +F+ M++ G + N L+ L+ R K + L
Sbjct: 119 VYSKLISVMGKKGQIRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKSKALVKALGY 178
Query: 153 MEK----ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
EK E K +Y IL+ Q+ D+ ++ + + + + PD T + Y
Sbjct: 179 FEKMKTTERCKPNIVTYNILLRAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDGYG 238
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLD 265
G + E++L M+ + +K T LL+ Y + K +QV + + P L
Sbjct: 239 KNGMIREMESVLVRMKSNQVKLDLITYNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTLP 298
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ I +GK ++AE VF+ M+ S + +L+ +Y +S +L Q+
Sbjct: 299 TFNSMILNYGKARLKDKAENVFQNMTDMGYTPSFVTHESLIHMYGLCGCVSNAVELFDQL 358
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
ES I +A++ ++ G ++ADS+ +A+ F P ++Y L+ Y K
Sbjct: 359 IESKVPIKVSTLNAMLDVYCINGLQQEADSLFTRAKSIKIF-PDATTYKLLYKAYTKANS 417
Query: 386 IHSTEKIFHRM 396
+K+ +M
Sbjct: 418 KELLDKLLKQM 428
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 102/262 (38%), Gaps = 50/262 (19%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSST-QAILAKHYVSGGRKEKAEAMLKEM 223
Y LI + G+ + + M++ G PD+S ++++ H S ++K++A++K +
Sbjct: 120 YSKLISVMGKKGQIRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHS---RDKSKALVKAL 176
Query: 224 -------EGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN--PWLDVCMAAIEA 273
+ K + T +LL +A+ +QV ++K L ES+ P + ++
Sbjct: 177 GYFEKMKTTERCKPNIVTYNILLRAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDG 236
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
+GK + E E+V RM KL Y L+ Y + K + + K ++ S
Sbjct: 237 YGKNGMIREMESVLVRMKSNQVKLDLITYNLLIDSYGKKQQFDKMEQVFKSLSRS----- 291
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
K KP ++ ++ Y K E +F
Sbjct: 292 -------------------------------KEKPTLPTFNSMILNYGKARLKDKAENVF 320
Query: 394 HRMRQVGYVARFKQFQTLVQAY 415
M +GY F ++L+ Y
Sbjct: 321 QNMTDMGYTPSFVTHESLIHMY 342
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 23/269 (8%)
Query: 72 KLRGLQKAESYIQKIPESFRGE---VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTS 128
K + L KA Y +K+ + R + V Y LL +V + +F + +
Sbjct: 168 KSKALVKALGYFEKMKTTERCKPNIVTYNILLRAFAQARDVNQVNYLFKDLDESSVSPDI 227
Query: 129 FACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
+ N ++ Y K +++ VL+ M+ VKL +Y +LID G+ M+QV ++
Sbjct: 228 YTFNGVMDGYGKNGMIREMESVLVRMKSNQVKLDLITYNLLIDSYGKKQQFDKMEQVFKS 287
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
+ +P T + +Y K+KAE + + M T L+ +Y G
Sbjct: 288 LSRSKEKPTLPTFNSMILNYGKARLKDKAENVFQNMTDMGYTPSFVTHESLIHMYGLCGC 347
Query: 248 ADQVARIW-KLCES---------NPWLDV-CMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
++ +L ES N LDV C+ ++ +EA+++F R
Sbjct: 348 VSNAVELFDQLIESKVPIKVSTLNAMLDVYCINGLQ--------QEADSLFTRAKSIKIF 399
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQM 325
Y L K Y L+KQM
Sbjct: 400 PDATTYKLLYKAYTKANSKELLDKLLKQM 428
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 12/201 (5%)
Query: 55 KLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVV--YRTLLANCVAGNNVKKA 112
KLD I Y +D K + K E + + S + + +++ N KA
Sbjct: 259 KLDLIT--YNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNYGKARLKDKA 316
Query: 113 EEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEK---ENVKLTQFSYKILI 169
E VF M D G+ SF ++ LI L V++ + L ++ V + + ++
Sbjct: 317 ENVFQNMTDMGY-TPSFVTHESLIHMYGL-CGCVSNAVELFDQLIESKVPIKVSTLNAML 374
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D+ + D + KS I PD++T +L K Y KE + +LK+M+ D++
Sbjct: 375 DVYCINGLQQEADSLFTRAKSIKIFPDATTYKLLYKAYTKANSKELLDKLLKQMDKDSVI 434
Query: 230 EHRWTCRLLLPLYAELGKADQ 250
++ R L +G + +
Sbjct: 435 PNK---RFFLDALGAIGSSTE 452
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 133/322 (41%), Gaps = 6/322 (1%)
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKE 156
+LL+N V A V+++M+ F C ++ Y + K ++ + + MEK
Sbjct: 36 SLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKL 95
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA 216
+L SY L+D D+ G V++ M +G+ + T +L K Y + E+A
Sbjct: 96 GFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEA 155
Query: 217 EAMLKEMEG-DNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD--VCMAAIE 272
E +L+EME D + + L+ Y ++GK R+ ++ + ++ VC + I
Sbjct: 156 EKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLIN 215
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
+ K +V E E + M K K + Y L+ Y + SK ++ QM G
Sbjct: 216 GYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEP 275
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ ++ L+K G+ + A L Q P Y ++D K GD +
Sbjct: 276 TVVTYNTLLKGLCRFGDYKDALR-LWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTL 334
Query: 393 FHRMRQVGYVARFKQFQTLVQA 414
+ + G F T++
Sbjct: 335 WDDILARGINKSIYAFNTMING 356
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 44/260 (16%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
V + M+ I PD T AI+ Y G+ E+A ++EME + + + L+ Y
Sbjct: 53 VYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYV 112
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
LG +E A+ V K MS+ + T
Sbjct: 113 SLGD--------------------------------IEGAKGVLKFMSEKGVMRNKVTLT 140
Query: 304 ALLKVYADHKMLSKGKDLVKQMA-ESGCHIGPLAWDALVKLHVEGGEVEKA----DSILL 358
L+K Y + + + ++++M E G + A+ AL+ + + G++ A D +L
Sbjct: 141 LLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLK 200
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI-- 416
+ N +F LI + Y K G +H E++ MR++ + TLV Y
Sbjct: 201 VGLKMN----LFVCNSLI-NGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRD 255
Query: 417 NAKTPAYGIRDRMRADNVFP 436
+ A+ + D+M + P
Sbjct: 256 GLSSKAFNVCDQMLRKGIEP 275
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 129/331 (38%), Gaps = 27/331 (8%)
Query: 41 GKALQLSEWLETNKKLDF--IERDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVY 96
GK + E++ +KL F Y S +D L ++ A+ ++ + E R +V
Sbjct: 80 GKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTL 139
Query: 97 RTLLANCVAGNNVKKAEEVFNRM-KDKGFPVTSFACNQLLILYKRL----DKKKVADVLL 151
L+ V++AE+V M K+ G V +A L+ Y ++ D +V D +L
Sbjct: 140 TLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEML 199
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
K +K+ F LI+ ++ + ++++ M+ ++PDS + L Y G
Sbjct: 200 ---KVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDG 256
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
KA + +M ++ T LL G R+W L +
Sbjct: 257 LSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYC 316
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK---------GKDLV 322
L K+ + F R W + + +YA + M++ K+
Sbjct: 317 TLLDGLFKMGD----FSRALTLWDDILARGINK--SIYAFNTMINGLCKMGEMDGAKETF 370
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
K+M E GC + + L + + G VE+A
Sbjct: 371 KRMEELGCKPDGITYRTLSDGYCKVGNVEEA 401
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 134/310 (43%), Gaps = 7/310 (2%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLME 154
Y L+ V ++A EV+ M G + + L++ + KR D + V +L ME
Sbjct: 198 YNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREME 257
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
VK +SY I I + GQ+ +++ M++EG +PD T +L + GR
Sbjct: 258 AHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRIS 317
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAI 271
A+ + +M+ + K R T LL + + G + V IW +++ + D + A I
Sbjct: 318 DAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVI 377
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
+A ++ +V EA +F M + Y +L+ + +L K M G
Sbjct: 378 DALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPK 437
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTE 390
P + ++ ++ G E +I ++K P + ++ AK G + +
Sbjct: 438 --PNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 495
Query: 391 KIFHRMRQVG 400
++FH ++ +G
Sbjct: 496 RVFHELKAMG 505
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 142/330 (43%), Gaps = 12/330 (3%)
Query: 94 VVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V Y ++ A C G V +A E+F+ MK KG ++ N L+ + + D+ D L L
Sbjct: 371 VAYTAVIDALCQVGR-VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR--FGDALEL 427
Query: 153 ---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M+ K +++ + I+ G+S + Q E MKS+GI PD +
Sbjct: 428 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 487
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLDVCM 268
GR A+ + E++ + T +++ ++ K D+ +I + + E+N DV
Sbjct: 488 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 547
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ I+ K + +EA +F ++ + + + Y LL + + L+++M
Sbjct: 548 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 607
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
S + ++ ++ + G V A +L + P SSY ++ K
Sbjct: 608 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGLVKEERY 666
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ IF +M++V + + T++ +++
Sbjct: 667 NEAFSIFCQMKKV-LIPDYATLCTILPSFV 695
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 1/163 (0%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLM 153
+Y +L+ V N + AE +F MK+ G F N LL + K + +++ V M
Sbjct: 792 LYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 851
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
++ + T +Y +I +S L + + S+G P T L + GR
Sbjct: 852 HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 911
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
E AE + EM K + +LL + G ++V +++
Sbjct: 912 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQ 954
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 131/307 (42%), Gaps = 8/307 (2%)
Query: 138 YKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
YK +D ++ M+ + ++ F+Y LI + +++ M I P+
Sbjct: 271 YKHMDD--ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
T + L +V G+ +AE + EM ++ +T L+ + + D+ +++L
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 258 CESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
S P + I+ + K +VEE +F+ MS+ +T YT L+ + +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
+ + KQM G H L ++ L+ + G++ KA ++ + Q++ +P +Y
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA-MVVFEYLQRSTMEPDIYTYN 507
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRAD 432
++++ K G + ++F + G + T++ + +K A + +M+ D
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 433 NVFPNKA 439
PN
Sbjct: 568 GPLPNSG 574
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 143/351 (40%), Gaps = 12/351 (3%)
Query: 96 YRTLLANCVAGN-NVKKAEEVFNRM-KDKGFP-VTSFACNQLLILYKRLDK-KKVADVLL 151
YR +L N ++ V A ++F M K + FP + F N+LL +++K + V +
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEF--NKLLSAVAKMNKFELVISLGE 107
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M+ + ++Y I I+ + + L+ V+ M G EPD T + L Y
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLL-PLYAELGKADQVARIWKLCE--SNPWLDVCM 268
R A A++ +M K +T L+ L+ ++ VA + ++ + P L
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ K ++ A ++ K+M K + Y ++ +K + +L +M
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + +L+ G A S LL + K P ++ ++D + K G +
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDA-SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPN 437
EK++ M + + +L+ + + A + + M + + FPN
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 134/329 (40%), Gaps = 35/329 (10%)
Query: 49 WLETNKKL-DFIER-------DYASCLDLIAKLRGLQKAES-YIQKIPESFRGEV-VYRT 98
W + ++ L D IER +++ +D K L +AE Y + I S ++ Y +
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 99 LLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-----KKVADVLLL- 152
L+ + + +A+ +F M K C ++ Y L K K+V + + L
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKD-------CFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 153 --MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M + + +Y LI Q+ D V + M S G+ P+ T IL
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL-CE-----SNPWL 264
G+ KA + + ++ ++ +T +++ + KA +V W+L C +P +
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMI---EGMCKAGKVEDGWELFCNLSLKGVSPNV 538
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
I + + EEA+++ K+M + ++ Y L++ +L+K+
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKA 353
M G G + LV + G ++K+
Sbjct: 599 MRSCG-FAGDASTIGLVTNMLHDGRLDKS 626
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 126/290 (43%), Gaps = 15/290 (5%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
Y +D K L++A ++ K SF EV Y +LL++ +++ E+F +MK K
Sbjct: 208 YNILIDAFGKTGQLERAFDFVGK-SRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAK 266
Query: 123 GFPVTSFACNQLL--ILYKRLD-KKKVADV---LLLMEKENVKLTQFSYKILIDIKGQSN 176
G N+L IL +RL +V DV L M ++K + ++D ++
Sbjct: 267 G-----LVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAG 321
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
+ ++ + MK +G+ D+ T IL G+ + A A+L EME + + T
Sbjct: 322 RVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYN 381
Query: 237 LLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
L+ Y + R++ K P + + IE +GK + + A ++F+ M
Sbjct: 382 TLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAE 441
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+ Y L+ + +++M ++GC +G + LV++
Sbjct: 442 GCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVRI 491
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 120/269 (44%), Gaps = 17/269 (6%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+K+ KL + LI I G++N + Q + A EG P + T + + + ++ GG
Sbjct: 21 MQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGD 80
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQV-------ARIWKLCESNPWLD 265
+ M K+M T +L+ L KADQV ++KL S P +
Sbjct: 81 VQNGLLMYKQMLKAKFVPDHTTFNILID---SLAKADQVEEACNVFGDMFKLNVS-PDVY 136
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
I + G + +++ +F+ M+ + + Y +++ + + + D+ +QM
Sbjct: 137 TYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQM 196
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ-QNKFKPMFSSYMLIMDQYAKRG 384
+ G + ++ L+ + G++E+A + K++ N+ +Y ++ ++G
Sbjct: 197 VQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEV-----TYNSLLSSLGRKG 251
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
DI ++F +M+ G V+ + L++
Sbjct: 252 DIQGLMELFGQMKAKGLVSNELTYAILIE 280
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 125/309 (40%), Gaps = 6/309 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
Y +++ + V +A ++F +M KG + N L+ + + + + A +
Sbjct: 172 TYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA--FDFVG 229
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
K + +Y L+ G+ D+ G+ ++ MK++G+ + T AIL + GR E
Sbjct: 230 KSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVE 289
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAI 271
+ EM +++K T +L ++ G+ + ++ K N I
Sbjct: 290 DVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILI 349
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCH 331
G+ K++ A A+ M + + Y L+ Y LS L +M E G
Sbjct: 350 NGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVA 409
Query: 332 IGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEK 391
+++ +L++ + G + A S L + + P +Y L++D + G + +
Sbjct: 410 PNVVSYSSLIEGFGKAGRTDAAIS-LFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAME 468
Query: 392 IFHRMRQVG 400
MR G
Sbjct: 469 YLREMRDAG 477
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 130/321 (40%), Gaps = 34/321 (10%)
Query: 132 NQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
N L+ +Y + +K L KE + T ++Y +I + + D+ + + M
Sbjct: 34 NTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLK 93
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
PD +T IL + E+A + +M N+ +T +L+ +G+ D
Sbjct: 94 AKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDA 153
Query: 251 VARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
V ++++ + P L + + A+G +V+EA +F++M + + Y L+
Sbjct: 154 VMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILID 213
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
+ L + D V +S + +++L+ G+++ L++ Q K K
Sbjct: 214 AFGKTGQLERAFDFV---GKSRSFTNEVTYNSLLSSLGRKGDIQG----LMELFGQMKAK 266
Query: 368 PMFS---SYMLIMDQYAKRG-------------------DIHSTEKIFHRMRQVGYV-AR 404
+ S +Y +++++ G DI + + + + G V A
Sbjct: 267 GLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAA 326
Query: 405 FKQFQTLVQAYINAKTPAYGI 425
F+ FQ + +NA T Y I
Sbjct: 327 FELFQDMKFKGLNADTVTYNI 347
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 81/205 (39%), Gaps = 12/205 (5%)
Query: 48 EWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANC 103
E ++ + K D + + + LD ++K ++ A Q + F+G V Y L+
Sbjct: 297 EMVDNDIKYDIVTIN--NVLDCLSKAGRVEAAFELFQDM--KFKGLNADTVTYNILINGL 352
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQ 162
+ A + M++ G N L+ Y + A L L M++ V
Sbjct: 353 GRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNV 412
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
SY LI+ G++ + MK+EG P+ T +L + GR A L+E
Sbjct: 413 VSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLRE 472
Query: 223 MEGDNLKEHRWTCRLLL---PLYAE 244
M + + T LL+ P Y E
Sbjct: 473 MRDAGCQMGKVTKSLLVRIPPQYME 497
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 131/325 (40%), Gaps = 11/325 (3%)
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDKKKVADVLLLME 154
+LL+N V KA V+ +M G F+ ++ Y R+D+ + + ME
Sbjct: 226 SLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDE--AFNFVKEME 283
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + +Y LID D+ G +V+ M +GI +S T +L K Y G+ E
Sbjct: 284 RSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQME 343
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLD--VCMAAI 271
+AE ++ M NL +L+ Y G+ D RI + + ++ +C + I
Sbjct: 344 QAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLI 403
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ KL V +A V M K W K + Y LL + + K L +M G
Sbjct: 404 NGYCKLGHVNKAAEVLVSM-KDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGV 462
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + ++ L+K G VE A I + P +Y ++D + K G
Sbjct: 463 NFTVVTYNTLLKNLFHVGHVEHALHI-WNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAM 521
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAY 415
I+ G+ + T++ +
Sbjct: 522 MIWKDALSKGFTKSITLYNTMICGF 546
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 258 CESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
C P L C + + + + +A V+++M YT ++ Y + +
Sbjct: 215 CGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDE 274
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS-SYMLI 376
+ VK+M S C + +++L+ +V G+V A +L A K P S +Y L+
Sbjct: 275 AFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVL--ALMSEKGIPENSRTYTLL 332
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRM 429
+ Y KRG + EK+ M + + L+ AY A A IRD M
Sbjct: 333 IKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM 387
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 133/328 (40%), Gaps = 11/328 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLL 152
V Y +L+ V+ +V A++V M +KG P S L+ Y KR ++ ++
Sbjct: 292 VTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGC 351
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M ++N+ + + Y +LI + + ++ +AM G++ ++ L Y G
Sbjct: 352 MMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGH 411
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--NPWLDVCMAA 270
KA +L M+ NLK + LL + K + + +KLC+ N ++ +
Sbjct: 412 VNKAAEVLVSMKDWNLKPDSYGYNTLLDGFC---KQEDFIKAFKLCDEMHNKGVNFTVVT 468
Query: 271 IEAWGK----LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
K + VE A ++ M K + Y LL + + + K
Sbjct: 469 YNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDAL 528
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
G ++ ++ + ++ +A I LK ++ F P +Y ++D Y K G++
Sbjct: 529 SKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELG-FPPDEITYRTLIDGYCKVGNL 587
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K+ + G + + + +L+
Sbjct: 588 VEALKLKDMSERDGISSSTEMYNSLITG 615
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 72/391 (18%), Positives = 157/391 (40%), Gaps = 19/391 (4%)
Query: 60 ERDYASCLDLIAKLRGLQKAES-YIQKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFN 117
E Y + LD K+ +A + + + F + +Y T++ + +A+E+F
Sbjct: 501 EVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFL 560
Query: 118 RMKDKGFPVTSFACNQLLILYKR----LDKKKVADVLLLMEKENVKLTQFSYKILIDIKG 173
+MK+ GFP L+ Y + ++ K+ D + E++ + + Y LI
Sbjct: 561 KMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKD---MSERDGISSSTEMYNSLITGVF 617
Query: 174 QSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKA-EAMLKEMEGDNLKEHR 232
+S +L ++ ++ MK+ + P+ T L + G +KA A K ++
Sbjct: 618 RSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNII 677
Query: 233 WTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWGKLNKVEEAEAV--FKR 289
+++ LY GK D+ I ++ + +P + L +E + V F +
Sbjct: 678 IGSKIVSSLYRH-GKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGK 736
Query: 290 MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ + + Y + K + + ++ + G + +L+ G+
Sbjct: 737 KAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGK 796
Query: 350 VEKADSILLKAQQQNK-FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQF 408
V +A L+ N P Y +++ K G++ ++F+++ + G +
Sbjct: 797 VNEA--FCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTY 854
Query: 409 QTLVQAYINA--KTPAYGIRDRMRADNVFPN 437
TL+ Y T A ++D+MR + + P+
Sbjct: 855 NTLIDGYCKGGRTTEALELKDKMREEGICPS 885
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 133/315 (42%), Gaps = 20/315 (6%)
Query: 119 MKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQF----SYKILIDIKGQ 174
+K FP ACN LL L KK D++ + V F +Y +L+D +
Sbjct: 143 LKVGAFPAVQ-ACNALL---NGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCR 198
Query: 175 SNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT 234
D+ ++ M +GIEP L S + +AE+M ++M+ + + +T
Sbjct: 199 QGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYT 258
Query: 235 CRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
+L+ Y + Q +++ + P + I+A K+ ++ A F +M+
Sbjct: 259 YNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMA 318
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
K + + +L+ Y+ S+ DL+ +M + + L+K G VE
Sbjct: 319 KFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVE 378
Query: 352 KADSILLKAQQQNKFKPMFS-SYMLIMDQYAKRGD------IHSTEKIFHRMRQVGYVAR 404
+AD IL + +++ P S Y ++D Y K G+ I K F MR+ G
Sbjct: 379 EADDILKRMEKEG--VPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPD 436
Query: 405 FKQFQTLVQAYINAK 419
+ ++Q ++NAK
Sbjct: 437 ALAYAVMLQGHLNAK 451
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 41/274 (14%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLL 152
V+Y TL+ + + + +AE +F +MKD G + N L+ Y K + K+ +
Sbjct: 222 VIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQG 281
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + ++ ++ ILID + +L + M G+ P+ L Y G
Sbjct: 282 MLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGN 341
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
+A +L EME + +T +L I+
Sbjct: 342 CSEATDLLLEMEKFKISPDVFTYSIL--------------------------------IK 369
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK------QMA 326
+L VEEA+ + KRM K ++ Y +L+ Y + K ++ K M
Sbjct: 370 NACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMR 429
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
+G LA+ +++ H+ + AD ++L A
Sbjct: 430 RNGLRPDALAYAVMLQGHLNAKHM--ADVMMLHA 461
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/178 (17%), Positives = 71/178 (39%), Gaps = 1/178 (0%)
Query: 237 LLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+L+ ++E+G D+ R++ + P + C A + K + + ++ M
Sbjct: 124 VLIIAFSEVGLVDEALRVYLKVGAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLF 183
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ Y L+ + + K L+ +M + G + + L+ ++ +A+S+
Sbjct: 184 PTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESM 243
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ + F P +Y ++MD Y K ++ ++ M G F L+ A
Sbjct: 244 FRQMKDSGVF-PNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDA 300
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 7/238 (2%)
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRWTCRLLLPL 241
V + M S + PD T +I+ Y G+ +KA A KEM+ L+ + TC L+
Sbjct: 211 HVYDQMISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLING 270
Query: 242 YAELGKADQVARIWKL-CESNPWLDVC--MAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
YA +G + + R+ +L E +V + I+++ K +EEAE VF+ +++ K +
Sbjct: 271 YAMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEK-KLVP 329
Query: 299 TKH-YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+H + L+ Y + + + M E G ++L+ + + G++ +A+ IL
Sbjct: 330 DQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQIL 389
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + KP +Y ++D Y + G + K+ RM Q V + L++ Y
Sbjct: 390 TRMNDWS-LKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGY 446
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 141/369 (38%), Gaps = 36/369 (9%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK-GFPVTSFACNQLLILYKRL-DKK 144
P+ F +V A C G V KA M + G + CN L+ Y + D +
Sbjct: 223 PDVFTCSIVVN---AYCRCGK-VDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVE 278
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
+ VL LM + V ++ LI + + +QV E + + + PD +L
Sbjct: 279 GMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLI 338
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI------WKLC 258
Y GR A + M ++ + C L+ Y + G+ + +I W L
Sbjct: 339 DGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSL- 397
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY----ADHKM 314
P ++ + + V+EA + RM + + Y LLK Y A H +
Sbjct: 398 --KPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA----DSILLKAQQQNKFK-PM 369
LS L K M + G ++ L++ + G+ ++A +++L + + +
Sbjct: 456 LS----LWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNV 511
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRD 427
S + M++ + +I IF V + +Q L Y N A+ ++D
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPDV------QTYQALSHGYYNVGNLKEAFAVKD 565
Query: 428 RMRADNVFP 436
M +FP
Sbjct: 566 FMEKKGIFP 574
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 118/299 (39%), Gaps = 44/299 (14%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
MEK+ + T Y LI + L + +V +++ G+ P +T L + + G
Sbjct: 566 FMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCR--------------------------LLLPLYAEL 245
+KA A EM + + C LLLP Y L
Sbjct: 626 MIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSL 685
Query: 246 GK-----ADQVARIWKLCESN----------PWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
+ A + K+ ES P V AI K K+ +A+ +F +
Sbjct: 686 KEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDL 745
Query: 291 SKTWKKLSTKH-YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGE 349
+ + + ++ YT L+ A ++K +L +MA G + ++AL+K + G
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 350 VEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV-ARFKQ 407
V++A +L K Q+ P +Y ++D K GD+ ++ +M + G V +KQ
Sbjct: 806 VDRAQRLLRKLPQKGT-TPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKGLVRGSYKQ 863
>gi|410110133|gb|AFV61146.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rhodocnemis]
Length = 345
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 120/280 (42%), Gaps = 36/280 (12%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y +I++ G++ ++ MK+ G+ P++++ + L YV + +A ++ EM
Sbjct: 24 AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEM 83
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
+ LL L C I+ +G+L +EA
Sbjct: 84 R---------EIKCLLDL-----------------------TTCNIMIDVYGQLGMAKEA 111
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+ +F M K + + Y LL+VY D ++ + L + M + +++++ +
Sbjct: 112 DKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMI 171
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 172 YGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEI 230
Query: 404 RFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 231 DQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 270
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 139/314 (44%), Gaps = 17/314 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVK--LTQFSYK 166
++A + + MK G + + + LL +Y ++ KK + L + E +K L +
Sbjct: 39 REARSLISEMKTAGVMPNTTSYSTLLTMY--VENKKFLEALSVFSEMREIKCLLDLTTCN 96
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
I+ID+ GQ D++ M+ GIEP+ + L + Y +A + + M+
Sbjct: 97 IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 156
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEA 283
N++++ T ++ +Y + + ++ + + +S P I WGK+ K++ A
Sbjct: 157 NIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 216
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F+++ + ++ + ++ Y +++ K L+ ++ + D + +
Sbjct: 217 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHI 272
Query: 344 HVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
G +E+A + +A + K +F + ++ +Y K ++ ++F +MR +GY
Sbjct: 273 LAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGY 329
Query: 402 VARFKQFQTLVQAY 415
++ AY
Sbjct: 330 FPDSDVIAIVLNAY 343
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+A ++F R+ + Y A++ V+ K+ + + L+ +M +G ++ L+
Sbjct: 5 KAISIFSRLKRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 64
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++VE + +A S+ + ++ + + ++I D Y + G +K+F MR++G
Sbjct: 65 TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGI 123
Query: 402 VARFKQFQTLVQAYINAK 419
+ TL++ Y +A+
Sbjct: 124 EPNVVSYNTLLRVYGDAE 141
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 129/332 (38%), Gaps = 7/332 (2%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDI 171
A+ +F+R GF F + L+ Y R K A + K K Y +ID
Sbjct: 140 AQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNLVVYNAVIDA 199
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
+ D ++ M +G+ PD T L R E+ + + EME +
Sbjct: 200 CSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARD 259
Query: 232 RWTCRLLLPLYAELGK----ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
T L+ Y G+ A + + K P + I+ + KL EA A+F
Sbjct: 260 DVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 319
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ M + Y ++ ++A + + + M E+G + ++AL+ + +
Sbjct: 320 QEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQ 379
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+ +A S LL+ +Q P +Y ++D Y K G +F +++ G
Sbjct: 380 GKFREAMS-LLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVL 438
Query: 408 FQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
+ TLV +P A + + M + + PN
Sbjct: 439 YSTLVDGCCKNGSPDEALALLEEMADNGIRPN 470
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 116/288 (40%), Gaps = 40/288 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLLL 152
VVY ++ C G + A +F M ++G N L+ R ++ + D +
Sbjct: 191 VVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAE 250
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM-KSEGIEPDSSTQAILAKHYVSGG 211
ME+ + +Y LI + + ++E M KS GIEP T + + Y G
Sbjct: 251 MEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLG 310
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM-- 268
+A A+ +EM N++ ++ ++A LG D+ I + E + D+
Sbjct: 311 LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYN 370
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM----LSKGKD---- 320
A ++++GK K EA ++ + M + + Y+AL+ Y H ++ +D
Sbjct: 371 ALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA 430
Query: 321 ---------------------------LVKQMAESGCHIGPLAWDALV 341
L+++MA++G + +++L+
Sbjct: 431 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 478
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 14/204 (6%)
Query: 50 LETNKKLDFIERD---YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVYRTLL 100
+ET K IE Y++ +D AKL +A + Q++ P+ + Y T++
Sbjct: 283 METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDG----ICYNTMV 338
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVK 159
N +A + M++ GF N LL Y + K + A LL M++
Sbjct: 339 DIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGAS 398
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
+Y LID + + + +K G++PD + L G ++A A+
Sbjct: 399 PNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALAL 458
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYA 243
L+EM + ++ + T LL Y
Sbjct: 459 LEEMADNGIRPNVITYNSLLDAYG 482
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 93/222 (41%), Gaps = 3/222 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM-KSEGIEPDSSTQAILAKHYVSGG 211
ME+ + S+ L+ QS + + E + + GI PD + IL K Y G
Sbjct: 134 MEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGIXPDKISYGILVKSYCESG 193
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAI 271
+KA +MLKEME ++ T +L + G++D+ ++W LDV +
Sbjct: 194 LSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAKKGCLDVGAYNV 253
Query: 272 E-AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ + E +A+ MS K T Y L+ Y M+ + K + ++ E+GC
Sbjct: 254 KIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEAKKVYAELEETGC 313
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS 372
H + L+ G+ E + ++ + K P F +
Sbjct: 314 HPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKI-PDFGT 354
>gi|410110139|gb|AFV61149.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
salviifolia]
Length = 378
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 120/280 (42%), Gaps = 36/280 (12%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y +I++ G++ ++ MK+ G+ P++++ + L YV + +A ++ EM
Sbjct: 25 AYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLSMYVENKKFLEALSVFSEM 84
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
TC +++ +Y +LG A + +++ WG
Sbjct: 85 REIKCLLDLTTCNIMIDVYGQLGMAKEADKLF------------------WG-------- 118
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
M K + + Y LL+VY D ++ + L + M + +++++ +
Sbjct: 119 ------MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMI 172
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 173 YGKTLEHEKANN-LIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEI 231
Query: 404 RFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
FQT++ AY A A+ R + R DN+ + A+
Sbjct: 232 DQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 271
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 146/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL+ V +A VF+ M+
Sbjct: 26 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLSMYVENKKFLEALSVFSEMR 85
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 86 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 145
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 146 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 205
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + VE + +F+ M
Sbjct: 206 SIWGKVGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 239
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 240 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 289
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 290 AVDAGEVKDITVFERMIHLLSKYKKYSNV---XEVFDKMRGLGYFPDSDVIAIVLNAY 344
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+A ++F R+ ++ Y A++ V+ K+ + + L+ +M +G ++ L+
Sbjct: 6 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 65
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++VE + +A S+ + ++ + + ++I D Y + G +K+F MR++G
Sbjct: 66 SMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGI 124
Query: 402 VARFKQFQTLVQAYINAK 419
+ TL++ Y +A+
Sbjct: 125 EPNVVSYNTLLRVYGDAE 142
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 132/299 (44%), Gaps = 13/299 (4%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKIL 168
++A EV+ M G + + L++ + KR D + V +L ME VK +SY I
Sbjct: 177 REALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTIC 236
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
I + GQ+ +++ M++EG +PD T +L + GR A+ + +M+ +
Sbjct: 237 IRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQ 296
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEA 285
K R T LL + + G + V IW +++ + D + A I+A ++ +V EA
Sbjct: 297 KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE 356
Query: 286 VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHV 345
+F M + Y +L+ + +L K M G P + ++ ++
Sbjct: 357 MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPK--PNGYTHVLFINY 414
Query: 346 EGGEVEKADSI----LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
G E +I L+K++ P + ++ AK G + +++FH ++ +G
Sbjct: 415 YGKSGESIKAIQRYELMKSK---GIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 470
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 142/330 (43%), Gaps = 12/330 (3%)
Query: 94 VVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
V Y ++ A C G V +A E+F+ MK KG ++ N L+ + + D+ D L L
Sbjct: 336 VAYTAVIDALCQVGR-VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADR--FGDALEL 392
Query: 153 ---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M+ K +++ + I+ G+S + Q E MKS+GI PD +
Sbjct: 393 FKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAK 452
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-WKLCESNPWLDVCM 268
GR A+ + E++ + T +++ ++ K D+ +I + + E+N DV
Sbjct: 453 SGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLA 512
Query: 269 --AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
+ I+ K + +EA +F ++ + + + Y LL + + L+++M
Sbjct: 513 VNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMY 572
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
S + ++ ++ + G V A +L + P SSY ++ K
Sbjct: 573 HSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI-PDLSSYNTVIYGLVKEERY 631
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
+ IF +M++V + + T++ +++
Sbjct: 632 NEAFSIFCQMKKV-LIPDYATLCTILPSFV 660
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 19/265 (7%)
Query: 41 GKALQLSEWLETNKKL-----DFIERDYASCLDLIAKLRGLQKA-ESYIQKIPESFR-GE 93
GK++++ E L+ +++ + Y + + + K R L++A + Y + + F
Sbjct: 801 GKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTP 860
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
Y LL + ++ AE +FN M + G N LL ++ + +KV +
Sbjct: 861 CTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQD 920
Query: 153 MEKENVKLTQFSYKILIDI---KGQSND-LTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
M + + SY I+ID GQ ND LT Q++E G+EPD T +L
Sbjct: 921 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEM----GLEPDLITYNLLIDGLG 976
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW---LD 265
R E+A ++ EM+ + + +T L+ + GKA + ++++ + W +
Sbjct: 977 KSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVF 1036
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRM 290
A I + + A A + RM
Sbjct: 1037 TYNALIRGYSVSGSTDSAYAAYGRM 1061
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 129/345 (37%), Gaps = 13/345 (3%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKE-NVKLTQFSYKILI 169
+A E+ + K G + + N L+ + +A+ L KE +F+Y +L+
Sbjct: 738 EAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLL 797
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
D G+S + M +V E M +G E T + V R E+A + +
Sbjct: 798 DAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFS 857
Query: 230 EHRWTCRLLLPLYAELGKADQVARIWK-----LCESNPWL-DVCMAAIEAWGKLNKVEEA 283
T LL + G+ + ++ C++N + ++ + G KV
Sbjct: 858 PTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCH- 916
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F+ M K YT ++ L+ G +Q+ E G + ++ L+
Sbjct: 917 --LFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDG 974
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
+ +E+A S L Q+ P +Y ++ K G K++ + G+
Sbjct: 975 LGKSKRLEEAVS-LFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKP 1033
Query: 404 RFKQFQTLVQAY-INAKT-PAYGIRDRMRADNVFPNKALAAQVAQ 446
+ L++ Y ++ T AY RM PN + Q+
Sbjct: 1034 NVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQLPN 1078
>gi|55295905|dbj|BAD67773.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 1013
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 163/406 (40%), Gaps = 67/406 (16%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-ME 154
Y LL VA +V AE+ F + + G P F CN LL LY RL A L+L M
Sbjct: 453 YSALLRCHVAKEDVDAAEDTFRALSNYG-PPDVFCCNDLLRLYMRLGHLDKARALILKMR 511
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-----IEP-DSSTQAILAKHYV 208
KE ++ + ++++ +++ D + E +++EG + P DSST +++ K +
Sbjct: 512 KEALQFDEDLCVTVLEVCCKTSINKDTDNLTEVIQNEGSSSKVLNPTDSSTLSMMLKSLL 571
Query: 209 --SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA------------ELGKADQVARI 254
GG ++ ++K + E ++ L L A + G+A Q+ +
Sbjct: 572 DKPGGLSSVSQLIMKFAREGSTDEAKFLYEHLTELGAKPDDTAIATLIVQYGQAQQLEQA 631
Query: 255 WKLCES------------NPWLDV---CMAAIEAW------------------------- 274
KL E+ N +D C EA+
Sbjct: 632 QKLFETASTSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISILVTHL 691
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K K +EAE + R +L T Y +K + L + +M SG
Sbjct: 692 TKQEKFQEAENIIYRCLHDEAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSGIPRSM 751
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS-SYMLIMDQYAKRGDIHSTEKIF 393
++ ++ ++ +GG++EKA + AQ+ P+ +Y ++ Y K G H +F
Sbjct: 752 QTFNIMISVYGQGGKLEKAVEMFSAAQELG--LPIDEKTYTNMLSFYGKAGKHHEASLLF 809
Query: 394 HRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPN 437
RM++ G F T++ AY + A I M+ +N P+
Sbjct: 810 SRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPD 855
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 117/304 (38%), Gaps = 41/304 (13%)
Query: 70 IAKLRGLQKAESYIQKI--PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
+ K Q+AE+ I + E+ VVY T + + + + A +++RM G P +
Sbjct: 691 LTKQEKFQEAENIIYRCLHDEAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSGIPRS 750
Query: 128 SFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
M+ ++ I+I + GQ L ++ A
Sbjct: 751 -------------------------MQ---------TFNIMISVYGQGGKLEKAVEMFSA 776
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
+ G+ D T + Y G+ +A + M+ D ++ + + ++ YA G
Sbjct: 777 AQELGLPIDEKTYTNMLSFYGKAGKHHEASLLFSRMKEDGIRPGKISFNTMINAYATSGL 836
Query: 248 ADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
++ I++ + N P +A I A+ + +AE + M ++ S H+
Sbjct: 837 HNEAEIIFQEMQKNNHVPDSHTYLALIRAYTEGKCYSKAEEAIQMMLRSNMTPSCTHFNH 896
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
L+ + + + + + QM E+G ++++H++ G V+ D IL
Sbjct: 897 LISAFLKEGQIDEAQRMYNQMEEAGIPADLACCRTMMRMHLDHGYVD--DGILFFETACR 954
Query: 365 KFKP 368
KP
Sbjct: 955 LLKP 958
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 115/283 (40%), Gaps = 5/283 (1%)
Query: 76 LQKAESYIQKIPESFR-GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL 134
L++A+ + SF G VY ++ ++A +F + D+G + + L
Sbjct: 628 LEQAQKLFETASTSFPVGGSVYNAMVDALCRCGKTEEAYRLFMELIDQGHNGDAVTISIL 687
Query: 135 LILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGI 193
+ + +K ++ +++ + +L Y I +S L + + M S GI
Sbjct: 688 VTHLTKQEKFQEAENIIYRCLHDEAELDTVVYNTFIKSMLESGKLYSAVSIYDRMISSGI 747
Query: 194 EPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR 253
T I+ Y GG+ EKA M + L T +L Y + GK + +
Sbjct: 748 PRSMQTFNIMISVYGQGGKLEKAVEMFSAAQELGLPIDEKTYTNMLSFYGKAGKHHEASL 807
Query: 254 IWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
++ + + P I A+ EAE +F+ M K + Y AL++ Y
Sbjct: 808 LFSRMKEDGIRPGKISFNTMINAYATSGLHNEAEIIFQEMQKNNHVPDSHTYLALIRAYT 867
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ K SK ++ ++ M S ++ L+ ++ G++++A
Sbjct: 868 EGKCYSKAEEAIQMMLRSNMTPSCTHFNHLISAFLKEGQIDEA 910
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 44/329 (13%)
Query: 69 LIAKLRGLQKAESYI--QKIPESFRGEVVYRTLLANCVAG-NNVKKAEEVFNRMKDKGFP 125
++ +LRG ++A + K+ + VV T+L VK AE F M G
Sbjct: 143 VLHELRGWRQARDFFAWMKLQLCYEPSVVAYTILLRLYGQVGKVKLAEVTFLEMLQAGCE 202
Query: 126 VTSFACNQLLILYKR--------------------------------LDKKKV-ADVLLL 152
+ AC LL Y R L K+K+ V+ L
Sbjct: 203 PDAVACGTLLCAYARWGKLNDMLMFYAAVRRRDIVPSISVFNFMVSSLQKQKLHGKVIHL 262
Query: 153 MEK---ENVKLTQFSYKILIDIKGQSNDLT-GMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
E+ NV QF+Y ++I + L MD E MK P+ +T ++L
Sbjct: 263 WEQMLEANVAPNQFTYTVVIGSYAKEGMLEEAMDAFGE-MKRRRFVPEEATYSLLISLCA 321
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLD 265
G+ E+A + EM+ ++ +TC +L LY + + ++ E N P
Sbjct: 322 KHGKGEEALGLYDEMKVKSIVPSNYTCASVLTLYYKNEDYSKALSLFSEMEQNKIVPDEV 381
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ + +GKL E+A+ +F+ + K + Y A+ +V+ + + + ++ M
Sbjct: 382 IYGILVRIYGKLGLYEDAQRMFEEIDKAGLLSDEQTYVAMAQVHMNVQNYDRALQVLDAM 441
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKAD 354
++ AL++ HV +V+ A+
Sbjct: 442 RARNVKPSQFSYSALLRCHVAKEDVDAAE 470
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 109/280 (38%), Gaps = 6/280 (2%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y IL+ + GQ + + M G EPD+ L Y G+ +
Sbjct: 172 AYTILLRLYGQVGKVKLAEVTFLEMLQAGCEPDAVACGTLLCAYARWGKLNDMLMFYAAV 231
Query: 224 EGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMAAIEAWGKLNKV 280
++ ++ + +V +W ++ E+N P I ++ K +
Sbjct: 232 RRRDIVPSISVFNFMVSSLQKQKLHGKVIHLWEQMLEANVAPNQFTYTVVIGSYAKEGML 291
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
EEA F M + Y+ L+ + A H + L +M ++
Sbjct: 292 EEAMDAFGEMKRRRFVPEEATYSLLISLCAKHGKGEEALGLYDEMKVKSIVPSNYTCASV 351
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ L+ + + KA S L +QNK P Y +++ Y K G +++F + + G
Sbjct: 352 LTLYYKNEDYSKALS-LFSEMEQNKIVPDEVIYGILVRIYGKLGLYEDAQRMFEEIDKAG 410
Query: 401 YVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNK 438
++ + + + Q ++N + A + D MRA NV P++
Sbjct: 411 LLSDEQTYVAMAQVHMNVQNYDRALQVLDAMRARNVKPSQ 450
>gi|357458279|ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 511
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 9/259 (3%)
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
++Y +LI + +++V+ M GIE +S T + Y G E+ E L +
Sbjct: 204 YTYSVLISCCAKFRRFDLIERVLADMSYSGIECNSVTYNSIIDGYGKAGMFEQMENSLTD 263
Query: 223 M-EGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCMAAIEAWGKLN 278
M E +N + +T L+ Y GK D++ + + +L P + I+++GK
Sbjct: 264 MIENENCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKTFNMMIKSYGKAG 323
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
++ ++V M + + + Y +++VY + K K M G + +
Sbjct: 324 MYDKMKSVMDFMERRFFAPTIVTYNTVIEVYGKAGEIEKMDKHFKNMKHIGMKPNSVTYC 383
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKF--KPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+LV + + G + K DSIL + + P F+ I+ Y + GD+ ++F M
Sbjct: 384 SLVNAYSKAGLIRKIDSILRHVENSDVILDTPFFNC---IISAYGQVGDLKKMGELFLAM 440
Query: 397 RQVGYVARFKQFQTLVQAY 415
R F ++QAY
Sbjct: 441 RARKCEPDRTTFTCMIQAY 459
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 138 YKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM-DQVVEAMKSEGIEPD 196
++R D + VL M ++ +Y +ID G++ M + + + +++E +PD
Sbjct: 216 FRRFDL--IERVLADMSYSGIECNSVTYNSIIDGYGKAGMFEQMENSLTDMIENENCQPD 273
Query: 197 SSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK 256
T L Y +GG+ +K E E + ++K T +++ Y + G D++ +
Sbjct: 274 VFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKTFNMMIKSYGKAGMYDKMKSVMD 333
Query: 257 LCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHK 313
E P + IE +GK ++E+ + FK M K ++ Y +L+ Y+
Sbjct: 334 FMERRFFAPTIVTYNTVIEVYGKAGEIEKMDKHFKNMKHIGMKPNSVTYCSLVNAYSKAG 393
Query: 314 MLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSY 373
++ K +++ + S + ++ ++ + + G+++K + L A + K +P +++
Sbjct: 394 LIRKIDSILRHVENSDVILDTPFFNCIISAYGQVGDLKKMGELFL-AMRARKCEPDRTTF 452
Query: 374 MLIMDQYAKRG 384
++ Y +G
Sbjct: 453 TCMIQAYNTQG 463
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K+ V+ ME+ T +Y +I++ G++ ++ MD+ + MK G++P+S T L
Sbjct: 327 KMKSVMDFMERRFFAPTIVTYNTVIEVYGKAGEIEKMDKHFKNMKHIGMKPNSVTYCSLV 386
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCE 259
Y G K +++L+ +E ++ ++ Y ++G ++ ++ + CE
Sbjct: 387 NAYSKAGLIRKIDSILRHVENSDVILDTPFFNCIISAYGQVGDLKKMGELFLAMRARKCE 446
Query: 260 SNPWLDVCMAAIEAWGKLNKVEEAE 284
+ CM I+A+ E A+
Sbjct: 447 PDRTTFTCM--IQAYNTQGITEAAK 469
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 100/246 (40%), Gaps = 16/246 (6%)
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD-NLKEHRWTCRLLLPL 241
Q+ E M EG++P L Y G A + +++M+ + K +T +L+
Sbjct: 153 QLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAFSTIEDMKSVVDCKPDVYTYSVLISC 212
Query: 242 YAELGKADQVARIWK-------LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
A+ + D + R+ C S + + I+ +GK E+ E M +
Sbjct: 213 CAKFRRFDLIERVLADMSYSGIECNSVTYNSI----IDGYGKAGMFEQMENSLTDMIEN- 267
Query: 295 KKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEK 352
+ +T +L+ Y + + K + + ++ ++K + + G +K
Sbjct: 268 ENCQPDVFTLNSLIGSYGNGGKIDKMEKWYDEFQLMSIKPDIKTFNMMIKSYGKAGMYDK 327
Query: 353 ADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
S++ ++ F P +Y +++ Y K G+I +K F M+ +G + +LV
Sbjct: 328 MKSVM-DFMERRFFAPTIVTYNTVIEVYGKAGEIEKMDKHFKNMKHIGMKPNSVTYCSLV 386
Query: 413 QAYINA 418
AY A
Sbjct: 387 NAYSKA 392
>gi|255661200|gb|ACU25769.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 426
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 129/294 (43%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K GI PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDFSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + LL +Y E K + ++ ++ E L++ C
Sbjct: 95 FREARSLISEMRMAGIMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLNLITCNV 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L+ +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLDMAKEADKLFWGMRKXGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ ++ ++ + E EKA++ L++ +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNTMMMIYGKTLEHEKANN-LIQEMHNRGIEPDAITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G +QT++ AY A A+ R + R DN+ + A+
Sbjct: 274 AMLFQKLRSSGVEIDQILYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 327
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/440 (19%), Positives = 177/440 (40%), Gaps = 72/440 (16%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALA-MANLRTRRMYGKALQLSEWLETNKKL-DF- 58
+PD +STL T + +EG + AL+ + + R+ G + S +E ++KL DF
Sbjct: 6 SPDKYTYSTLITYFGKEG----LFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFS 61
Query: 59 -------------IERD---YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVY 96
I D Y S +++ K + ++A S I ++ P++ V Y
Sbjct: 62 KAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDT----VSY 117
Query: 97 RTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEK 155
TLL V +A VF M++ + CN ++ +Y +LD K AD L M K
Sbjct: 118 STLLTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRK 177
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
++ SY L+ + G + + M+ + IE + T + Y EK
Sbjct: 178 XGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEK 237
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG 275
A +++EM ++ T ++ ++ ++GK D+ A +
Sbjct: 238 ANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAML--------------------- 276
Query: 276 KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL 335
F+++ + ++ Y ++ Y +++ K L+ ++ +
Sbjct: 277 -----------FQKLRSSGVEIDQILYQTMIVAYERAGLVAHAKRLLHELKRP----DNI 321
Query: 336 AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHR 395
D + + G +E+A + +A + K + + + +++ ++K + ++F +
Sbjct: 322 PRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDI-TVFERMINLFSKYKKYSNVVEVFEK 380
Query: 396 MRQVGYVARFKQFQTLVQAY 415
MR +GY ++ AY
Sbjct: 381 MRGLGYFPDSNVIALVLNAY 400
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L ++ G + A + L++ME D + L LY+ L
Sbjct: 1 RGRALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y +++ V
Sbjct: 51 ----------------------IELSRKLCDFSKAISIFSRLKRSGITPDLVAYNSMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G +++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLN 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + +K+F MR+ G + TL++ Y +A+
Sbjct: 149 LITCNVMI-DVYGQLDMAKEADKLFWGMRKXGIEPNVVSYNTLLRVYGDAE 198
>gi|410110109|gb|AFV61134.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
diamantinensis]
Length = 363
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 7/263 (2%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ +K G PD + + +A +++ EM+ + + + LL +Y
Sbjct: 8 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYV 67
Query: 244 ELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
E K + ++ ++ E LD+ C I+ +G+L +EA+ +F M K + +
Sbjct: 68 ENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 127
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y LL+VY D ++ + L + M + +++++ ++ + E EKA++ L++
Sbjct: 128 SYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN-LIQE 186
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
Q +P +Y I+ + K G + +F ++R G FQT++ AY A
Sbjct: 187 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAYERAGL 246
Query: 421 PAYGIR---DRMRADNVFPNKAL 440
A+ R + R DN+ + A+
Sbjct: 247 IAHAKRLLHELKRPDNIPRDTAI 269
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/358 (17%), Positives = 143/358 (39%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 24 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALXVFSEMR 83
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 84 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 143
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 144 ESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 203
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A + F+++ T ++
Sbjct: 204 SIWGKVGKLDRAAML--------------------------------FQKLRSTGVEIDQ 231
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 232 ILFQTMIVAYERAGLIAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 287
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 288 AIDAGEVKDITVFERMIHLLSKYKKYANV---VEVFDKMRGLGYFPDSNVIAVVLNAY 342
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+A ++F R+ ++ Y A++ V+ K+ + + L+ +M +G ++ L+
Sbjct: 4 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 63
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++VE + +A + + ++ + + ++I D Y + G +K+F MR++G
Sbjct: 64 TMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGI 122
Query: 402 VARFKQFQTLVQAYINAK 419
+ TL++ Y +A+
Sbjct: 123 EPNVVSYNTLLRVYGDAE 140
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 129/332 (38%), Gaps = 7/332 (2%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDI 171
A+ +F+R GF F + L+ Y R K A + K K Y +ID
Sbjct: 139 AQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNLVVYNAVIDA 198
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
+ D ++ M +G+ PD T L R E+ + + EME +
Sbjct: 199 CSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARD 258
Query: 232 RWTCRLLLPLYAELGK----ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF 287
T L+ Y G+ A + + K P + I+ + KL EA A+F
Sbjct: 259 DVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALF 318
Query: 288 KRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
+ M + Y ++ ++A + + + M E+G + ++AL+ + +
Sbjct: 319 QEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQ 378
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+ +A S LL+ +Q P +Y ++D Y K G +F +++ G
Sbjct: 379 GKFREAMS-LLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVL 437
Query: 408 FQTLVQAYINAKTP--AYGIRDRMRADNVFPN 437
+ TLV +P A + + M + + PN
Sbjct: 438 YSTLVDGCCKNGSPDEALALLEEMADNGIRPN 469
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 116/288 (40%), Gaps = 40/288 (13%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD-VLLL 152
VVY ++ C G + A +F M ++G N L+ R ++ + D +
Sbjct: 190 VVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAE 249
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM-KSEGIEPDSSTQAILAKHYVSGG 211
ME+ + +Y LI + + ++E M KS GIEP T + + Y G
Sbjct: 250 MEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLG 309
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL-DVCM-- 268
+A A+ +EM N++ ++ ++A LG D+ I + E + D+
Sbjct: 310 LAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYN 369
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM----LSKGKD---- 320
A ++++GK K EA ++ + M + + Y+AL+ Y H ++ +D
Sbjct: 370 ALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA 429
Query: 321 ---------------------------LVKQMAESGCHIGPLAWDALV 341
L+++MA++G + +++L+
Sbjct: 430 GLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 477
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 14/204 (6%)
Query: 50 LETNKKLDFIERD---YASCLDLIAKLRGLQKAESYIQKI------PESFRGEVVYRTLL 100
+ET K IE Y++ +D AKL +A + Q++ P+ + Y T++
Sbjct: 282 METMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDG----ICYNTMV 337
Query: 101 ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVK 159
N +A + M++ GF N LL Y + K + A LL M++
Sbjct: 338 DIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGAS 397
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
+Y LID + + + +K G++PD + L G ++A A+
Sbjct: 398 PNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALAL 457
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYA 243
L+EM + ++ + T LL Y
Sbjct: 458 LEEMADNGIRPNVITYNSLLDAYG 481
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 155/375 (41%), Gaps = 25/375 (6%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
VVY L+ + N +A ++ M G + L+ ++ + A +LL
Sbjct: 350 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 409
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M +++ + +Y ++I+ + + +++ M++ GI P+ T +I+ G
Sbjct: 410 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 469
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMA 269
EKA +L+EM LK + + L+ Y G I+ K+ + N P L +
Sbjct: 470 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 529
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K+ +VEE+ F +M + + Y+ L+ Y + L + LV++M ++G
Sbjct: 530 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 589
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS--------YMLIMDQYA 381
+ + L++ + + ++EK S FK M Y +++ +
Sbjct: 590 LKPNDVIYIDLLESYFKSDDIEKVSS---------TFKSMLDQGVMLDNRIYGILIHNLS 640
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNKA 439
G++ + ++ + + G V + +L+ + A+GI D M V PN
Sbjct: 641 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN-- 698
Query: 440 LAAQVAQVDAFRKTA 454
+ A +D K+
Sbjct: 699 IVCYNALIDGLCKSG 713
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 131/347 (37%), Gaps = 48/347 (13%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLL----------ILYK------------------- 139
V+ A EV M+D+G + CN LL +L+K
Sbjct: 190 VQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYST 249
Query: 140 ---------RLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
D K VL+ M + L +Y +LI +S + + M+
Sbjct: 250 LIEAYCKVREFDTAK--KVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMED 307
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
G+ PD T L R +A+A+L EM LK + L+ + G AD+
Sbjct: 308 YGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADE 367
Query: 251 VARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
++ K P + K+ +++ A + K+M + + T Y +++
Sbjct: 368 AFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE 427
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH--VEGGEVEKADSILLKAQQQNK 365
+ H L+ +M +G I P + + +H + GE EKA S LL+
Sbjct: 428 GHFRHHSKKDAFRLLSEMENAG--ISPNVYTYSIMIHGLCQSGEPEKA-SDLLEEMTTKG 484
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
KP Y ++ Y + G++ +IF +M +V + + +L+
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 141/353 (39%), Gaps = 36/353 (10%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADVLLL 152
VY +L++ + +KA + + M KG + C LI L K D +V
Sbjct: 666 VYSSLISGLCKTADREKAFGILDEMSKKGVD-PNIVCYNALIDGLCKSGDISYARNVFNS 724
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ + + +Y LID + D++ + M + GI PD+ ++L S G
Sbjct: 725 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 784
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRL--LLPLYAELGKADQVARIWKLCESNPWLDVCMA- 269
E+A +++EM L+ H L+ + + GK + ++ + + +
Sbjct: 785 LEQAMFLIEEMF---LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 841
Query: 270 --AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
I + K+ E +F + + + + +H+++L M+++GK
Sbjct: 842 ENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM-----DMINQGKI------- 889
Query: 328 SGCHIGPL-AWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM-FSSYMLIMDQYAKRGD 385
PL D +++ H + G ++KA ++L+ K PM SSY+ I+D ++G
Sbjct: 890 ------PLDVVDDMIRDHCKEGNLDKA--LMLRDVIVAKSAPMGCSSYLAIVDNLCRKGK 941
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNK 438
+ + M + G Q L+ N T Y DN+ +K
Sbjct: 942 LSEALNLLKEMDKRGICPSENQCLILLT---NLHTSGYIQEHNTVLDNMLCHK 991
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 157/389 (40%), Gaps = 55/389 (14%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD----VL 150
Y+ L+ + V K EV+ +M+ KG+ + FA N LL L K + D V
Sbjct: 185 TYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLL---NALAKAGMVDQAYQVF 241
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG-----IEPDSSTQAILAK 205
M++ ++Y ILI + G++ T ++E M SEG I ++ +A+
Sbjct: 242 EDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNTVIEALGKN 301
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD 265
V ++A ML +M + + +++T ++L + + G+ ++ I +C
Sbjct: 302 KMV-----DEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCLNRP 356
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
V I+A K EA +VF RM + +K + ++L+ + + ++ DL+ M
Sbjct: 357 VYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLLHMM 416
Query: 326 AESGCH------------IGPL-----------------------AWDALVKLHVEGGEV 350
E G +G L ++ ++ G V
Sbjct: 417 PEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISSFGRVGLV 476
Query: 351 EKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQT 410
+KA S L + + KP +Y +++ K GD+ +F M++ GY +
Sbjct: 477 DKA-SELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSI 535
Query: 411 LVQAY--INAKTPAYGIRDRMRADNVFPN 437
L++ + N A + D M A PN
Sbjct: 536 LIECFGKSNKVDMACSLFDEMVAQGCIPN 564
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 122/286 (42%), Gaps = 8/286 (2%)
Query: 10 STLTKYAEEGNDLSRAEIALAMANLRTRRMYGKAL-QLSEWLETNKKLDFIERDYASCLD 68
S L + EG L+ + L +M +A+ LS+ +E++ + + + Y+ LD
Sbjct: 274 SLLEEMVSEGCVLNLIAYNTVIEALGKNKMVDEAIFMLSKMIESDCRPN--QFTYSIMLD 331
Query: 69 LIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTS 128
+++ L + I I VY L+ + +A VF RM +
Sbjct: 332 VLSTGGQLHRLNE-ILDICSGCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDR 390
Query: 129 FACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEA 187
+A +L +K A D+L +M ++ + Y ++ G+ ++ M + +
Sbjct: 391 YAFVSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDT 450
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M++ G+ PD T I+ + G +KA + +EME + K T ++ + G
Sbjct: 451 MRANGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGD 510
Query: 248 ADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
D+ ++K + +P + IE +GK NKV+ A ++F M
Sbjct: 511 LDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEM 556
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 212 RKEKAEAM--LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMA 269
R + AEAM + EME D + + T LL+ + E+G+ +A W L N + C+
Sbjct: 132 RADPAEAMRLIAEMERDGVPGNISTVNLLVGMGVEVGRCLDLASKWGL-RLNGYTYKCL- 189
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
++A + +V + V+++M + KL Y LL A M+ + + + M ++
Sbjct: 190 -VQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGMVDQAYQVFEDMKQNY 248
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSIL 357
C + L+++ + G+ K S+L
Sbjct: 249 CDPDAYTYTILIRMSGKAGKTTKFVSLL 276
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 89 SFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA 147
S + +VV + NC+ N ++ +A +F M++KG+ F + L+ + + +K +A
Sbjct: 490 SCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMA 549
Query: 148 DVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
L M + +Y IL+D + T + E +K +G+ PDS T +IL +
Sbjct: 550 CSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYETLKQQGLTPDSITYSILER 608
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 123/277 (44%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V+ Y LI++ + D + + +K GI PD + +
Sbjct: 35 MEQDRVRGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIMPDLVVYNSMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVMPDTVSYTALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKD 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQSRGIEPNAITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A ++ R
Sbjct: 274 AILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKR 310
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L ++ G + A + L++ME D ++ L LY+ L
Sbjct: 1 RDRALSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y +++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGIMPDLVVYNSMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G +++ AL+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLLRVYGDAE 198
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 4/253 (1%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +ID + + ++ M S G++P+ + K S R E+AE +L EM
Sbjct: 261 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 320
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKLNKVE 281
++ T +L+ + + G D+V + ++ E DV I + K V+
Sbjct: 321 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 380
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA + K MS K +T YT +LK + ++L+ M + GC P+ ++ L+
Sbjct: 381 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 440
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G E+A LLK N P SY ++D K G ++ + M G
Sbjct: 441 NFMCKKGLAEQAIE-LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGI 499
Query: 402 VARFKQFQTLVQA 414
+ ++ A
Sbjct: 500 TPNTIIYSSMASA 512
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 47/264 (17%), Positives = 103/264 (39%), Gaps = 33/264 (12%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLM 153
+Y T++ + + A ++ +RM G N +L ++ ++ D+L M
Sbjct: 260 MYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 319
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+E+ L ++ IL+D Q+ + + +++E M G PD T + + G
Sbjct: 320 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 379
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
++A +LK M K + + ++L LC + W+D
Sbjct: 380 DEAVMLLKNMSACGCKPNTISYTIVLK---------------GLCRAERWVD-------- 416
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
A+ + M + + + L+ + + +L+KQM +GC
Sbjct: 417 ---------AQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPD 467
Query: 334 PLAWDALVKLHVEGGEVEKADSIL 357
+++ ++ + G+ E+A +L
Sbjct: 468 LISYSTVIDGLGKAGKTEEALELL 491
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IVQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKAGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A A+ R
Sbjct: 274 AMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKR 310
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/423 (18%), Positives = 177/423 (41%), Gaps = 73/423 (17%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL---------- 151
V +A VF+ M++ + CN ++ +Y +L K AD L
Sbjct: 123 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 152 --------------------------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
LM+++N+ +Y ++ I G++ + + ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M++ GIEP+S T + + + G+ ++A + +++ ++ + + ++ Y +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKA 302
Query: 246 GKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
G R+ +S N D + + G ++EEA VF++ + +
Sbjct: 303 GLVAHAKRLLHELKSPDNIPRDTAIHILAGAG---RIEEATYVFRQAIDAGEVRDITVFE 359
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVKLHVEGGEVEKADSILLK 359
++ +++ +K + ++ +M G ++ L +A KLH E +KA+ + ++
Sbjct: 360 RMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLH----EFDKANGVYME 415
Query: 360 AQQ 362
Q+
Sbjct: 416 MQE 418
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/401 (18%), Positives = 155/401 (38%), Gaps = 8/401 (1%)
Query: 22 LSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAES 81
L+ + +L R + +AL+L ++++ + E Y + ++ + L+K
Sbjct: 44 LTMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSE 103
Query: 82 YIQKIPES-FRGEVVYRTLLANCVAGNNVKKAE-EVFNRMKDKGFPVTSFACNQLLILYK 139
+ +PE+ + V T L N N +A + RMK + N +L
Sbjct: 104 IFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLNACS 163
Query: 140 R--LDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
+ LD + + ++ M E ++ +Y L+ + V + M G+ D+
Sbjct: 164 KGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADA 223
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
T L + + + E +L+EME + L+ YA+ G A ++K
Sbjct: 224 VTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQ 283
Query: 258 CESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
+ P ++ + +G E+ ++F M + + Y +L++V+ +
Sbjct: 284 MQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGY 343
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
+ +L M +SG + AL+ + GG +A I + N+ P +
Sbjct: 344 FQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKI-HQHMLTNESTPSLEASA 402
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
++ Y K ++R+R+ G + + L+Q Y
Sbjct: 403 GLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGY 443
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 8/328 (2%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLL 151
+ Y T+L C G + + +F +M+ +G N LL R ++ A V
Sbjct: 153 ITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFK 212
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + V +YK L+D SN L +++++ M+ EG PD + L + Y G
Sbjct: 213 TMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAG 272
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCM 268
A + K+M+ T LL +Y G +QV ++ K + P +
Sbjct: 273 NVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYN 332
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ I+ +G+ +E+ +F M + K Y+ALL V + + + + M +
Sbjct: 333 SLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTN 392
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ-QQNKFKPMFSSYMLIMDQYAKRGDIH 387
A L+ + G D+++ + ++ P S+Y ++ YAK G
Sbjct: 393 ESTPSLEASAGLISSY--GKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYV 450
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ M + G+ A ++++AY
Sbjct: 451 EAGSTLYAMNKAGFQAPVSSVNSVMEAY 478
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 139/372 (37%), Gaps = 49/372 (13%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKIL 168
A E F R KD GF ++ +CN L L + + K+ DV + M K + ++ I
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPL--LSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIF 206
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV---SGGRKEKAEAMLKEMEG 225
I+ ++ L + +E MK+ GI P+ T L Y S G+ KAEA +KEM
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA 266
Query: 226 DNLKEHRWTCRLLLP----------------------------LYAEL-------GKADQ 250
+ + + T L+ Y L GK ++
Sbjct: 267 NKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEE 326
Query: 251 VARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
+W P + A I + K ++EA VF +SK + + ++
Sbjct: 327 AIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMID 386
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
Y M+ +G L M + G ++ L+ +++ A LL + K
Sbjct: 387 AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKE-LLNEMENKGLK 445
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGI 425
+Y +++D K + EK+ + M +G + TL+ Y A +
Sbjct: 446 GDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV 505
Query: 426 RDRMRADNVFPN 437
R RM + PN
Sbjct: 506 RTRMEKERKQPN 517
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 69 LIAKL---RGLQKAESYIQKIP-ESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKG 123
LIA L + LQ A+ + ++ + +G+VV Y L+ + + AE++ N M + G
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478
Query: 124 FPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
N L+ Y K K A +V MEKE + +Y +LI + N L +
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAAN 538
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
++ M +G+ P+ +T I+ + G E L
Sbjct: 539 GLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIEGHL 576
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 155/375 (41%), Gaps = 25/375 (6%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-L 152
VVY L+ + N +A ++ M G + L+ ++ + A +LL
Sbjct: 328 VVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQ 387
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M +++ + +Y ++I+ + + +++ M++ GI P+ T +I+ G
Sbjct: 388 MVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE 447
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESN--PWLDVCMA 269
EKA +L+EM LK + + L+ Y G I+ K+ + N P L +
Sbjct: 448 PEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNS 507
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K+ +VEE+ F +M + + Y+ L+ Y + L + LV++M ++G
Sbjct: 508 LIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTG 567
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS--------YMLIMDQYA 381
+ + L++ + + ++EK S FK M Y +++ +
Sbjct: 568 LKPNDVIYIDLLESYFKSDDIEKVSS---------TFKSMLDQGVMLDNRIYGILIHNLS 618
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNKA 439
G++ + ++ + + G V + +L+ + A+GI D M V PN
Sbjct: 619 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN-- 676
Query: 440 LAAQVAQVDAFRKTA 454
+ A +D K+
Sbjct: 677 IVCYNALIDGLCKSG 691
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 131/357 (36%), Gaps = 41/357 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNR 118
Y S + ++K+ ++++ Y ++ E RG E Y L+ + +++ AE++ R
Sbjct: 505 YNSLIFGLSKVGRVEESTKYFAQMQE--RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 562
Query: 119 MKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M D G P + L +K D +KV+ M + V L Y ILI S +
Sbjct: 563 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 622
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ +V+ ++ G PD + L +EKA +L EM +
Sbjct: 623 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGV--------- 673
Query: 238 LLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
+P + A I+ K + A VF +
Sbjct: 674 -----------------------DPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 710
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
+ YT+L+ +S L +M +G + L G++E+A +
Sbjct: 711 NCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA--MF 768
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L + + SS+ ++D + KRG + T K+ H + G V + ++
Sbjct: 769 LIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 825
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 131/317 (41%), Gaps = 37/317 (11%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADVLLL 152
VY +L++ + +KA + + M KG + C LI L K D +V
Sbjct: 644 VYSSLISGLCKTADREKAFGILDEMSKKGVD-PNIVCYNALIDGLCKSGDISYARNVFNS 702
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ + + +Y LID + D++ + M + GI PD+ ++L S G
Sbjct: 703 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 762
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRL--LLPLYAELGKADQVARIWKLCESNPWLDVCMA- 269
E+A +++EM L+ H L+ + + GK + ++ + + +
Sbjct: 763 LEQAMFLIEEM---FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 819
Query: 270 --AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK---DLVKQ 324
I + K+ E +F + + + + +H+++L M+++GK D+V
Sbjct: 820 ENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFM-----DMINQGKIPLDVV-- 872
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM-FSSYMLIMDQYAKR 383
D +++ H + G ++KA ++L+ K PM SSY+ I+D ++
Sbjct: 873 -------------DDMIRDHCKEGNLDKA--LMLRDVIVAKSAPMGCSSYLAIVDNLCRK 917
Query: 384 GDIHSTEKIFHRMRQVG 400
G + + M + G
Sbjct: 918 GKLSEALNLLKEMDKRG 934
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IVQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A A+ R
Sbjct: 274 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 310
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF+ M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + I + T + Y EKA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + ++ Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSP----DNIPRDTA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K ++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANLI---EVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALVLNAY 400
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 126/311 (40%), Gaps = 44/311 (14%)
Query: 135 LILYKRL--------DKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVE 186
L+LY L D K + +++ + +Y +I++ G++ ++
Sbjct: 44 LVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLIS 103
Query: 187 AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
MK+ G+ PD+ + + L YV + +A ++ EM TC ++
Sbjct: 104 EMKTAGVXPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIM-------- 155
Query: 247 KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
I+ +G+L+ +EA+ +F M K + + Y LL
Sbjct: 156 ------------------------IDVYGQLDMAKEADKLFWSMRKIGIEPNVISYNTLL 191
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
+VY D ++ + L + M + ++ ++ ++ + E EKA++ L++
Sbjct: 192 RVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN-LIQEMHNXGI 250
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+P +Y I+ + K G + +F ++R G +QT++ AY A A+ R
Sbjct: 251 EPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 310
Query: 427 ---DRMRADNV 434
+ R DN+
Sbjct: 311 LLHELKRPDNI 321
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 157/361 (43%), Gaps = 15/361 (4%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y++ ++L KL KA S ++ S V Y +++ K+A + + MK
Sbjct: 47 YSNLIELSRKLCDYSKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMK 106
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVK--LTQFSYKILIDIKGQSND 177
G + + + LL +Y ++ +K + L + E +K L + I+ID+ GQ +
Sbjct: 107 TAGVXPDTVSYSTLLTMY--VENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDM 164
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
D++ +M+ GIEP+ + L + Y +A + + M+ N++++ T
Sbjct: 165 AKEADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNT 224
Query: 238 LLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ +Y E KA+ + + P I WGK+ K++ A +F+++ +
Sbjct: 225 MMMIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSG 284
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
++ Y ++ Y +++ K L+ ++ + D + G +E+A
Sbjct: 285 VEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPD----NIPRDTAXHILAGAGRIEEAT 340
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ +A + K + + + ++D ++K + ++F +MR +GY ++ A
Sbjct: 341 WVFRQAIDAGEVKDI-TVFSRMIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNA 399
Query: 415 Y 415
Y
Sbjct: 400 Y 400
>gi|297833394|ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 148/359 (41%), Gaps = 15/359 (4%)
Query: 68 DLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
DLIAK + LQ E + ++F E Y LL +A+++F+ M ++G
Sbjct: 97 DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156
Query: 126 VTSFACNQLLILYKRLDKKKVADVLLLMEK----ENVKLTQFSYKILIDIKGQSNDLTGM 181
T LL Y R + D +++ + F+Y L+ ++ +
Sbjct: 157 PTVELYTALLAAYTR--SNLIDDAFSILDTMKGLPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLP 240
D + + M I P++ TQ I+ Y GR ++ E +L +M K WT ++L
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 274
Query: 241 LYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKL 297
++ +GK D + ++ + P I ++GK ++ +V + M K
Sbjct: 275 VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPW 334
Query: 298 STKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA-DSI 356
+T Y +++ +AD + QM G + L+ + G K S+
Sbjct: 335 TTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSV 394
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
L A+ + F Y ++ AK D+ E+++ RM++ V + F+ +V+AY
Sbjct: 395 QLAAKFEIPENTAF--YNAVIAACAKADDLIEMERVYTRMKERQCVCDSRTFEIMVEAY 451
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 137/329 (41%), Gaps = 49/329 (14%)
Query: 100 LANCVAGNNVKKAEEVFNRMKDKGF--PVTSFACNQLLILYKRLDKKKVADVLLLMEKEN 157
L++ +A +A EVF+ ++++ F P L++L K + + M +E
Sbjct: 95 LSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEG 154
Query: 158 VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS-EGIEPDSSTQAILAKHYVSGGRKEKA 216
++ T Y L+ +SN + +++ MK +PD T + L K V + +
Sbjct: 155 LEPTVELYTALLAAYTRSNLIDDAFSILDTMKGLPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 217 EAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK------LCESNPW-LDVCMA 269
+++ KEM+ + + T ++L Y +G+ DQ+ ++ C+ + W +++ ++
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 274
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+G + K++ E+ +++ + T+ + L+ Y +M K +++ M
Sbjct: 275 V---FGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM---- 327
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
++ +F S+Y I++ +A GD +
Sbjct: 328 --------------------------------RKLEFPWTTSTYNNIIEAFADVGDAKNM 355
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINA 418
E F +MR G A K F L+ Y NA
Sbjct: 356 ELTFDQMRSEGMKADTKTFCCLINGYANA 384
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 126/329 (38%), Gaps = 5/329 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
V Y T++ +V KA +F +M D G P CN ++ L K K VL
Sbjct: 253 VSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 312
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M E++ +Y LI S T ++++ M +G P+ T ++L G
Sbjct: 313 MIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGL 372
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
+A + M K + T LL YA G + + L N P V
Sbjct: 373 HAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNI 432
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I A+ K +++EA F +M + YT ++ L QM + G
Sbjct: 433 EIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ L+ G+ EKA+ + + + P +++ ++D+ K G +
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRG-IPPNVNTFNSMIDKLFKEGKVTEA 551
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINA 418
K+F M + G + T++ Y A
Sbjct: 552 RKLFDLMPRAGAKPNVVSYNTMIHGYFIA 580
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 106/262 (40%), Gaps = 42/262 (16%)
Query: 4 PDISIH-STLTKYAEEGN--DLSRAEIALAMANLRTRR--------MYGKALQLSEWLET 52
P+ S + S L YA EGN D++ + + +R R Y K +L E T
Sbjct: 390 PNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLT 449
Query: 53 NKKL-------DFIERDYASCLDLIAKLRGLQKAES-YIQKIPESFRGEVV-YRTLLANC 103
K+ D + Y + +D + K+ L A S + Q I + +++ + TL+
Sbjct: 450 FNKMQQQGFMPDIVA--YTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGF 507
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQ 162
+KAEE+F M D+G P N ++ L+K + + LM + K
Sbjct: 508 ALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNV 567
Query: 163 FSYKILID---IKGQSND---------LTGM-------DQVVEAMKSEGIEPDSSTQAIL 203
SY +I I G+ + L G+ + +++ M S G++PD T L
Sbjct: 568 VSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTL 627
Query: 204 AKHYVSGGRKEKAEAMLKEMEG 225
GR E + +EM G
Sbjct: 628 IDSCCEDGRIEDILTLFREMLG 649
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 112/252 (44%), Gaps = 4/252 (1%)
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
LID + D+ VVE M ++G+ D L + G + A +++ M+ D
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG 252
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCM--AAIEAWGKLNKVEEAE 284
++ + T L+ Y + D+ +++ + S DV A ++ + + EA
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAY 312
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
A+F+ M K + Y L+ A + S+ L+ +M G + + + AL+
Sbjct: 313 ALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRL 372
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
+ G++E+A +L AQ N P F +Y +++D + + G+I E++ +M + +
Sbjct: 373 GKEGKIEEAKDVLRHAQSDN-ITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPN 431
Query: 405 FKQFQTLVQAYI 416
F +++ +
Sbjct: 432 VVTFSSIINGLV 443
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/395 (18%), Positives = 153/395 (38%), Gaps = 44/395 (11%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGE--VVYRTLLANCVAGNNVKKAEEVFNRMK 120
++S ++ + K L KA Y++K+ +S V Y TL+ + A +V+ M
Sbjct: 435 FSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDML 494
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+G +F + L+ ++ + A+ L M++ + L +Y L+D ++ ++
Sbjct: 495 HEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMP 554
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+V + + + + PD+ + + G+ +A++ LKEM L+ + T ++
Sbjct: 555 AAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 614
Query: 240 PLYAELGKADQVARIWKLCESNP-------WLDVCMAAIEAWGKLNKV-----EEAEAVF 287
GK + ++ K + N + + + +EA G + K E A A F
Sbjct: 615 AARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEA-GVVKKAKFLLNEMASAGF 673
Query: 288 KRMSKTWKKL---------------------------STKHYTALLKVYADHKMLSKGKD 320
S T +++ Y L+ V H M
Sbjct: 674 APTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATV 733
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
++ +M G + ++AL+ H + ++ A +I + Q P +++ ++
Sbjct: 734 VLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG-LSPNIATFNTLLGGL 792
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
G I + + M++VG + LV Y
Sbjct: 793 ESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGY 827
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/314 (18%), Positives = 124/314 (39%), Gaps = 43/314 (13%)
Query: 148 DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
DVL + +N+ +Y +L+D ++ ++ G +QV+ M+ + + P+ T + +
Sbjct: 383 DVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGL 442
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-----LCESNP 262
V G KA +++M+ + + T L+ + + + +++ E+N
Sbjct: 443 VKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANN 502
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL-KVYADHKM------- 314
+ V + + K +E AEA+FK M + L +YT L+ ++ M
Sbjct: 503 F--VVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVG 560
Query: 315 ---------------------------LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEG 347
S+ K +K+M +G ++ ++
Sbjct: 561 QELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCRE 620
Query: 348 GEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQ 407
G+ KA LLK ++N KP +Y ++ + G + + + + M G+
Sbjct: 621 GKTSKALK-LLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLT 679
Query: 408 FQTLVQAYINAKTP 421
Q ++QA ++ P
Sbjct: 680 HQRVLQACSGSRRP 693
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 74/397 (18%), Positives = 148/397 (37%), Gaps = 42/397 (10%)
Query: 63 YASCLDLIAKLRGLQKA-ESYIQKIPESFRGE-VVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +D K +G + A + Y + E V +L+ N++ AE +F M
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529
Query: 121 DKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLT 179
++G + L+ L+K + V + ++N+ Y + I+ +
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFS 589
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWT----- 234
++ M++ G+EPD +T + G+ KA +LKEM+ +++K + T
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLV 649
Query: 235 -----------CRLLLPLYAELGKADQV---ARIWKLCESNPWLDVCM------------ 268
+ LL A G A R+ + C + DV +
Sbjct: 650 VGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLH 709
Query: 269 AAIEAWGKLNKV-------EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
A I + L V A V M T + AL+ + L +
Sbjct: 710 ADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAI 769
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
QM G ++ L+ G + +AD++L ++ +P +Y +++ YA
Sbjct: 770 YAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVL-SDMKKVGLEPNNLTYDILVTGYA 828
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
K+ + +++ M G++ + + +L+ + A
Sbjct: 829 KKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKA 865
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 38 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 97
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 98 FREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 157
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 158 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 217
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 218 IVQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKAGKLDRA 276
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A A+ R
Sbjct: 277 AMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKR 313
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 DEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL 53
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
IE KL +A ++F R+ ++ Y A+
Sbjct: 54 -------------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 88
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 INVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKC 148
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 201
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 79/423 (18%), Positives = 177/423 (41%), Gaps = 73/423 (17%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 9 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 65
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 66 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLT 125
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL---------- 151
V +A VF+ M++ + CN ++ +Y +L K AD L
Sbjct: 126 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 185
Query: 152 --------------------------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
LM+++N+ +Y ++ I G++ + + ++
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M++ GIEP+S T + + + G+ ++A + +++ ++ + + ++ Y +
Sbjct: 246 QEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKA 305
Query: 246 GKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
G R+ +S N D + + G ++EEA VF++ + +
Sbjct: 306 GLVAHAKRLLHELKSPDNIPRDTAIHILAGAG---RIEEATYVFRQAIDAGEVRDITVFE 362
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVKLHVEGGEVEKADSILLK 359
++ +++ +K + ++ +M G ++ L +A KLH E +KA+ + ++
Sbjct: 363 RMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLH----EFDKANGVYME 418
Query: 360 AQQ 362
Q+
Sbjct: 419 MQE 421
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 37 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 96
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 97 FREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 156
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 157 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 216
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 217 IVQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 275
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A A+ R
Sbjct: 276 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 312
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 2 MRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL-- 52
Query: 248 ADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK 307
IE KL +A ++F R+ ++ Y A++
Sbjct: 53 -----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMIN 89
Query: 308 VYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFK 367
V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 90 VFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLL 149
Query: 368 PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 150 DLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 200
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 81/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 8 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 64
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 65 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 124
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF+ M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 125 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 184
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + I + T + Y EKA ++
Sbjct: 185 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 244
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 245 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 278
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + ++ Y ++ Y +++ K L+ ++ + D
Sbjct: 279 ------FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSP----DNIPRDTA 328
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K ++ ++F +MR
Sbjct: 329 IHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLFSKYKKYANV---VEVFDKMRG 385
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 386 LGYFPDSNVIALVLNAY 402
>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
Length = 634
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 152/377 (40%), Gaps = 16/377 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY----KRLDKKKVADV 149
+ + L+ V + +A F RM G T+ N L+ Y + + ++V D+
Sbjct: 150 IFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDM 209
Query: 150 LLLMEKEN---VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
+ V+ +Y IL+ + L +VV M++ G +PD T LA
Sbjct: 210 MASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASA 269
Query: 207 YVSGGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNP 262
Y +AE ++ EM + L+ T +++ Y LG+A + R K P
Sbjct: 270 YAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLP 329
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
+ V ++ + N + + V M + K Y+ L + ++K +
Sbjct: 330 NVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVF 389
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+M E+G P + L K +V + EKA+ LL+ + +P ++ ++ +
Sbjct: 390 DKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEE-LLRQMGRLGVRPNVVTFTTVISGWCS 448
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKAL 440
D+ + +++ MR G + F+TL+ Y K P A + M+ V P +
Sbjct: 449 VADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQTT 508
Query: 441 AAQVAQVDAFRKTAVSE 457
VA DA++ + E
Sbjct: 509 YCLVA--DAWKAVGLVE 523
>gi|410110097|gb|AFV61128.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
rugosa]
Length = 348
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 7/263 (2%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ +K G PD + + +A +++ EM+ + + + LL +Y
Sbjct: 9 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYV 68
Query: 244 ELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
E K + ++ ++ E LD+ C I+ +G+L +EA+ +F M K + +
Sbjct: 69 ENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 128
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y LL+VY D ++ + L + M + +++++ ++ + E EKA++ L++
Sbjct: 129 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN-LIQE 187
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
Q +P +Y I+ + K G + +F ++R G FQT++ AY A
Sbjct: 188 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGL 247
Query: 421 PAYGIR---DRMRADNVFPNKAL 440
A+ R + R DN+ + A+
Sbjct: 248 VAHAKRLLHELKRPDNIPRDTAI 270
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 137/314 (43%), Gaps = 17/314 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVK--LTQFSYK 166
++A + MK G + + + LL +Y ++ KK + L + E +K L +
Sbjct: 39 REARSLIGEMKAAGVMPNTXSYSTLLTMY--VENKKFLEALSVFXEMREIKCLLDLTTCN 96
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
I+ID+ GQ D++ M+ GIEP+ + L + Y +A + + M+
Sbjct: 97 IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 156
Query: 227 NLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
N++++ T ++ +Y E KA+ + + + P I WGK+ K++ A
Sbjct: 157 NIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 216
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F+++ + ++ + ++ Y +++ K L+ ++ + D + +
Sbjct: 217 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHI 272
Query: 344 HVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
G +E+A + +A + K +F + ++ +Y K ++ ++F +MR +GY
Sbjct: 273 LAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGY 329
Query: 402 VARFKQFQTLVQAY 415
++ AY
Sbjct: 330 FPDSDVIAIVLNAY 343
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+A ++F R+ ++ Y A++ V+ K+ + + L+ +M +G ++ L+
Sbjct: 5 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLL 64
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++VE + +A S+ + ++ + + ++I D Y + G +K+F MR++G
Sbjct: 65 TMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGI 123
Query: 402 VARFKQFQTLVQAYINAK 419
+ TL++ Y +A+
Sbjct: 124 EPNVVSYNTLLRVYGDAE 141
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 141/346 (40%), Gaps = 39/346 (11%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME- 154
Y T++ + +A + R K KG + A N +L R K KV + L ++E
Sbjct: 345 YNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGR--KGKVEEALRILEA 402
Query: 155 -KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
K + SY ILID+ ++ +L +V ++MK G+ P+ T I+ R
Sbjct: 403 MKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEA 273
++A C + L L ++ D V C + I+
Sbjct: 463 DEA------------------CSIFLGLDHKVCTPDSVT----FC----------SLIDG 490
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
G+ KV +A ++++M + + + YT+L++ + G + K+M GC
Sbjct: 491 LGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPD 550
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+ + + + GE+EK ++ + + Q P SY +++ K G T K+F
Sbjct: 551 LMLLNNYMDCVFKAGEIEKGRALFEEIKAQG-LTPDVRSYSILIHGLVKGGFSKDTYKLF 609
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
+ M++ G + + ++ + + AY + + M+ + P
Sbjct: 610 YEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/331 (18%), Positives = 143/331 (43%), Gaps = 9/331 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLL 152
VVY +L+ N + +++ M +G P N + ++K + +K +
Sbjct: 517 VVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEE 576
Query: 153 MEKENVKLTQFSYKILID--IKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
++ + + SY ILI +KG + T ++ MK +G+ D+ I+ +
Sbjct: 577 IKAQGLTPDVRSYSILIHGLVKGGFSKDTY--KLFYEMKEQGLHLDTRAYNIVIDGFCKS 634
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPW-LDVCM- 268
G+ KA +L+EM+ L+ T ++ A++ + D+ +++ +S L+V +
Sbjct: 635 GKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVY 694
Query: 269 -AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
+ I+ +GK+ +++EA + + + + +T + LL + + + + M
Sbjct: 695 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKN 754
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
C + + +V + + KA + + Q+ KP +Y ++ A+ G++
Sbjct: 755 LKCPPNEVTYSIMVNGLCKVRKFNKA-FVFWQEMQKQGLKPNTITYTTMISGLARVGNVL 813
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ +F R + G + + +++ NA
Sbjct: 814 EAKDLFERFKSSGGIPDSACYNAMIEGLSNA 844
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 1/159 (0%)
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
P + C+ + ++ K K+ EA V + M K + + YT L+ +
Sbjct: 164 GPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLT 223
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L++QM E G + + L+ + G V+ A S LL + N F Y + +D +
Sbjct: 224 LLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALS-LLDEMKSNSFNADLVLYNVCIDCF 282
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
K G + K FH ++ G V F +++ A+
Sbjct: 283 GKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAE 321
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 66/363 (18%), Positives = 146/363 (40%), Gaps = 15/363 (4%)
Query: 65 SCLDLIA---KLRGLQKAESYIQKIPE-SFR-GEVVYRTLLANCVAGNNVKKAEEVFNRM 119
+C++++A K R L++A I+ + + FR Y TL+ A + + +M
Sbjct: 169 TCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQM 228
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDL 178
++ G+ VT L+ ++ R + A LL M+ + Y + ID G+ +
Sbjct: 229 QEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKV 288
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+ +KS+G+ PD T + R ++A + +E++ + + +
Sbjct: 289 DMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTM 348
Query: 239 LPLYAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
+ Y +GK ++ + K C + C+ + G+ KVEEA + + M K
Sbjct: 349 IMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCI--LTCLGRKGKVEEALRILEAM-KM 405
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ Y L+ + L + M E+G + + ++ + +++A
Sbjct: 406 DAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEA 465
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
SI L + P ++ ++D + G ++ ++ +M G + +L++
Sbjct: 466 CSIFLGLDHK-VCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIR 524
Query: 414 AYI 416
+
Sbjct: 525 NFF 527
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 93/225 (41%), Gaps = 19/225 (8%)
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT--------WKKL 297
G V + ++ ++ PW A+ + ++ + E V +R+ W +
Sbjct: 65 GMRKTVHDVCRVLDTYPWGAALEDALNTFDEMPQPELVVGVIRRLKDVRVALHYFRWVER 124
Query: 298 STKH------YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVE 351
TK Y ALL + A + L + ++++M+ +G +V V+ ++
Sbjct: 125 KTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLR 184
Query: 352 KADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+A ++ + ++ KF+P +S+Y ++ + + + +M+++GY F TL
Sbjct: 185 EAFGVI-ETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTL 243
Query: 412 VQAYINAK--TPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTA 454
+ + A + D M++++ N L +D F K
Sbjct: 244 ICVFAREGRVDAALSLLDEMKSNSF--NADLVLYNVCIDCFGKVG 286
>gi|356536609|ref|XP_003536829.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g23020-like [Glycine max]
Length = 787
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 146/362 (40%), Gaps = 11/362 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-M 153
Y TL+ G A E F R+ +G + + N ++ LY + + A +L M
Sbjct: 248 TYATLIDTYGKGGQFHAACETFARIIRQGRALNTVTLNTMIHLYGNCGRLRQACLLFQKM 307
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ ++Y ILI + ++N + + MK +EPD + L Y +
Sbjct: 308 GEFRCVPDTWTYNILISLNIKNNKVKLAAKYFARMKKAFLEPDVVSYRTLLYAYSTRKMV 367
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL---CESNPWLDVCMAA 270
+AE +++EM+ +L+ +T L +Y E G +Q + +W N D A
Sbjct: 368 REAEELIREMDERDLEIDEFTQSALTRMYVESGMLEQ-SWLWFRRFHLAGNISSDCYSAN 426
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+A+G+ AE VF K KKL+ + ++K Y K K L M + G
Sbjct: 427 IDAYGEWGYTLAAEKVFI-CCKEKKKLTVLEFNVMIKAYGIGKCYDKACQLFDSMKKFGV 485
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
++ +L+ + + A S L K Q+ Y +++ + K G E
Sbjct: 486 VADKCSYSSLIHILASADKPHLAKSYLKKMQEAGLVSDCV-PYCVVISSFTKLGQFEMAE 544
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAF 450
+++ M +GY + + +INA A +++ + N L A ++
Sbjct: 545 ELYKEM--LGYAVQPDVI--IYGVFINAFADAGSVKEAINYVNEMRKAGLPGNPAIYNSL 600
Query: 451 RK 452
K
Sbjct: 601 IK 602
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 170/453 (37%), Gaps = 59/453 (13%)
Query: 17 EEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGL 76
EEG LS EI++ L+ + + +ALQ+ EW + + D Y L + + R
Sbjct: 87 EEGT-LSDREISVI---LKAQVSWQRALQIFEWFKNKGRYDLNVIHYNIMLCTLGRARKW 142
Query: 77 QKAESYIQKIPESFRGEV--VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL 134
ES ++ V Y TL+ G ++A RM+ +G +
Sbjct: 143 DLVESLWTEMNAKGVAPVNSTYGTLIDAYSKGGLKEEALAWLQRMQSQGMEPDEVTMGIV 202
Query: 135 LILYKRLDKKKVADVLL----------------LMEKENVKLTQFSYKILIDIKGQSNDL 178
++LYKR + + A ++ NV L+ +Y LID G+
Sbjct: 203 VLLYKRAGEFQKAQEFFRRWMRGAPFRLGVDDKVVSHTNVCLSSHTYATLIDTYGKGGQF 262
Query: 179 TGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLL 238
+ + +G ++ T + Y + GR +A + ++M WT +L
Sbjct: 263 HAACETFARIIRQGRALNTVTLNTMIHLYGNCGRLRQACLLFQKMGEFRCVPDTWTYNIL 322
Query: 239 LPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ L K NKV+ A F RM K + +
Sbjct: 323 ISLNI--------------------------------KNNKVKLAAKYFARMKKAFLEPD 350
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
Y LL Y+ KM+ + ++L+++M E I AL +++VE G +E++
Sbjct: 351 VVSYRTLLYAYSTRKMVREAEELIREMDERDLEIDEFTQSALTRMYVESGMLEQSWLWFR 410
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ Y +D Y + G + EK+F ++ + +F +++AY
Sbjct: 411 RFHLAGNISS--DCYSANIDAYGEWGYTLAAEKVFICCKEKKKLTVL-EFNVMIKAYGIG 467
Query: 419 KT--PAYGIRDRMRADNVFPNKALAAQVAQVDA 449
K A + D M+ V +K + + + A
Sbjct: 468 KCYDKACQLFDSMKKFGVVADKCSYSSLIHILA 500
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 122/277 (44%), Gaps = 15/277 (5%)
Query: 147 ADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
A+ + + KE KLT + ++I G Q+ ++MK G+ D + + L
Sbjct: 439 AEKVFICCKEKKKLTVLEFNVMIKAYGIGKCYDKACQLFDSMKKFGVVADKCSYSSLIHI 498
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC---ESNPW 263
S + A++ LK+M+ L +++ + +LG+ + ++K P
Sbjct: 499 LASADKPHLAKSYLKKMQEAGLVSDCVPYCVVISSFTKLGQFEMAEELYKEMLGYAVQPD 558
Query: 264 LDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVK 323
+ + I A+ V+EA M K + Y +L+K+Y L + ++ K
Sbjct: 559 VIIYGVFINAFADAGSVKEAINYVNEMRKAGLPGNPAIYNSLIKLYTKVGYLKEAQETYK 618
Query: 324 --QMAESGCHIGPLAWDALVKLHVEGGEVEKADSI---LLKAQQQNKFKPMFSSYMLIMD 378
Q+++ G + + + ++ L+ E VE+A I L+K + N+F SY +++
Sbjct: 619 LIQLSDEGPSL--FSSNCMIDLYTERLMVEQAKEIFESLMKNEVANEF-----SYAMMLC 671
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
Y K G + +I +MR++G++ + ++ Y
Sbjct: 672 MYKKIGRLDEAIQIATQMRRLGFLTDILSYNNVLGLY 708
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 127/298 (42%), Gaps = 5/298 (1%)
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLT 179
D G+P F N L+ + ++ A ++ + K ++ T S+ LI ++ +
Sbjct: 135 DSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVE 194
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
++ M+SE + PD T + L GR ++ + EM G L + T +L+
Sbjct: 195 EGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLI 254
Query: 240 PLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ GK D + +++ + P L A I K+ ++EA + MS + +
Sbjct: 255 DGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLR 314
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+T L+ + + ++ ++M E G + +A+ L+ G V A+
Sbjct: 315 PDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAER- 373
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+L+ FKP +Y +++D + K+G++ K+ M+ G+V + L+
Sbjct: 374 MLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNG 431
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 146/359 (40%), Gaps = 28/359 (7%)
Query: 70 IAKLRGLQKAESYIQKIPE-SFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
K+ G+ A +IP+ R VV + TL++ C V++ + M+ +
Sbjct: 152 FCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPD 211
Query: 128 SFACNQL---LILYKRLDKKKVADVLLLMEKENVKLTQFSYKILID--IKGQSNDLTGMD 182
F + L L RLD+ + + M + + ++ +LID KG DL +
Sbjct: 212 VFTFSALINGLCKEGRLDEGSL--LFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKN 269
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+ M ++G+ PD T L G ++A ++ EM L+ R T L+
Sbjct: 270 --FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGC 327
Query: 243 AELGKADQVARI-WKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
+ G + I ++ E LD I + +V +AE + + M K
Sbjct: 328 CKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDD 387
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
YT ++ + + G L+K+M G G + ++AL+ + G+V+ A +LL
Sbjct: 388 PTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNA-KMLLD 446
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRG-----DIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
A P +Y ++++ ++K G DI ++EK G V + + LV
Sbjct: 447 AMLNVGVAPNDITYNILLEGHSKHGSSVDVDIFNSEK--------GLVKDYASYTALVN 497
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 125/299 (41%), Gaps = 6/299 (2%)
Query: 124 FPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
FP+ CN LL L + +K D+L M+ ++ +Y ++ +
Sbjct: 222 FPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGRFKAAL 280
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
V+E M+ + ++ D T I+ R +A +LK M D+L T L+ +
Sbjct: 281 CVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGF 340
Query: 243 AELGKADQVARIWK-LCESN--PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
GK + ++ + N P + I+ + + ++++A ++ M T S
Sbjct: 341 FREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSE 400
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y+ALL Y ML L++ + G I L+ + GE+ KA IL K
Sbjct: 401 LTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQIL-K 459
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ ++ P +Y +++ + +H T++I RM++ G + + TL+ Y A
Sbjct: 460 SMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKA 518
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 123/328 (37%), Gaps = 44/328 (13%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI----LYKRLDKKKVAD 148
E Y TL+ + A VFN M + V S A +I +R+DK
Sbjct: 330 ECTYNTLINGFFREGKINHARYVFNHMLRQNL-VPSVATYTTMIDGYCRNRRIDK--ALS 386
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
+L M+ V ++ +Y L++ + + L ++E +KS GI + + + IL +
Sbjct: 387 ILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFC 446
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM 268
G KA+ +LK M D + +P +
Sbjct: 447 QVGEISKAKQILKSMFEDGI--------------------------------DPDVITYS 474
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I ++ K+ E + + RM K+ + YT L+ Y + + +
Sbjct: 475 ALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRR 534
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSS--YMLIMDQYAKRGDI 386
G P+ +AL+ G + +A+ Q ++ F S + I+D Y RG+I
Sbjct: 535 GLVANPVIHNALLHAFYREGMITEAEHF---RQYMSRMNISFDSVSFNRIIDSYCHRGNI 591
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQA 414
++ M + GY +Q L++
Sbjct: 592 VGAFSVYDDMVRYGYSPNVCTYQNLLRG 619
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 132/327 (40%), Gaps = 12/327 (3%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LM 153
Y LL+ + A + M +KG + A LL + K A + ++
Sbjct: 683 YTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEII 742
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
KE + +Y L++ +S ++ + +++ M + P+S++ IL YV G+
Sbjct: 743 CKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQF 802
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD-QVARIWKLCESNPWLD--VCMAA 270
K+ + K M ++ T RLL+ +E G D V + K+ + D V
Sbjct: 803 SKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDIL 862
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+ + +K+ A VF M S+K ++A++ L ++ +M + G
Sbjct: 863 ITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGL 922
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIH 387
+ ALV GE+++A + +++ K P + I+ + G +
Sbjct: 923 QPNHTHYIALVNAKCRVGEIDRA----FRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLE 978
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQA 414
+F M + G V F TL+ +
Sbjct: 979 EAVIVFSSMMRSGMVPTVATFTTLMHS 1005
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/401 (18%), Positives = 154/401 (38%), Gaps = 8/401 (1%)
Query: 22 LSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAES 81
L+ + +L R + +AL+L ++++ + E Y + ++ + L+K
Sbjct: 44 LTMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSE 103
Query: 82 YIQKIPES-FRGEVVYRTLLANCVAGNNVKKAE-EVFNRMKDKGFPVTSFACNQLLILYK 139
+ +PE+ + V T L N N +A + RMK + N +L
Sbjct: 104 IFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLNACS 163
Query: 140 R--LDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDS 197
+ LD + + ++ M E ++ +Y L+ + V + M G+ D+
Sbjct: 164 KGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADA 223
Query: 198 STQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
T L + + + E +L+EME + L+ YA+ G A ++K
Sbjct: 224 VTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQ 283
Query: 258 CESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM 314
+ P ++ + +G E+ ++F M + Y +L++V+ +
Sbjct: 284 MQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGY 343
Query: 315 LSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYM 374
+ +L M +SG + AL+ + GG +A I + N+ P +
Sbjct: 344 FQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKI-HQHMLTNESTPSLEASA 402
Query: 375 LIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
++ Y K ++R+R+ G + + L+Q Y
Sbjct: 403 GLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGY 443
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 8/328 (2%)
Query: 94 VVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLL 151
+ Y T+L C G + + +F +M+ +G N LL R ++ A V
Sbjct: 153 ITYNTVLNACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFK 212
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M + V +YK L+D SN L +++++ M+ EG PD + L + Y G
Sbjct: 213 TMNESGVVADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAG 272
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW---KLCESNPWLDVCM 268
A + K+M+ T LL +Y G +QV ++ K + P +
Sbjct: 273 NVHGAAGVFKQMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYN 332
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ I+ +G+ +E+ +F M + K Y+ALL V + + + + M +
Sbjct: 333 SLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTN 392
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQ-QQNKFKPMFSSYMLIMDQYAKRGDIH 387
A L+ + G D+++ + ++ P S+Y ++ YAK G
Sbjct: 393 ESTPSLEASAGLISSY--GKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYV 450
Query: 388 STEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ M + G+ A ++++AY
Sbjct: 451 EAGSTLYAMNKAGFQAPVSSVNSVMEAY 478
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 21/273 (7%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+VY TL+ N++++ E +F M+DKG ++ N L+ Y R + + + LL
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGM--DQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
ME ++ SY LI G++ ++ M D + MK G++P S + L Y
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVS 498
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL----------CES 260
G EKA A +EM + +K T +L + G ++ IWKL
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 261 NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKD 320
N LD + K EA V SK + S Y L+ YA +K
Sbjct: 559 NTLLD-------GFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQ 611
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
L+K+MA + + ++ V + ++A
Sbjct: 612 LLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA 644
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 147/343 (42%), Gaps = 35/343 (10%)
Query: 105 AGNNVKKAEEVFNRMKDKGFP---------VTSFACNQLLILYKRLDKKKVADVLLLMEK 155
AG + K+ E+F +M +KG V SF C++ L K++ + MEK
Sbjct: 321 AGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSF-CDEGL-------KEEALVIQTEMEK 372
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ ++ Y L+D +SN + ++ + M+ +G++P ++T IL Y + +
Sbjct: 373 KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDI 432
Query: 216 AEAMLKEMEGDNLKEH--RWTCRLLLPLYAELGK-----ADQVARIWKLCESNPWLDVCM 268
E +L+EME L+ + +TC L+ Y K AD R+ K+ P
Sbjct: 433 VETLLREMEDLGLEPNVKSYTC--LISAYGRTKKMSDMAADAFLRMKKVG-LKPSSHSYT 489
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
A I A+ E+A A F+ M K K S + YT++L + K ++ K M
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
+ ++ L+ + G +A ++ + + +P +Y ++M+ YA+ G
Sbjct: 550 KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMG-LQPSVMTYNMLMNAYARGGQDAK 608
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRDRMRA 431
++ M + + T++ A++ +RD RA
Sbjct: 609 LPQLLKEMAALNLKPDSITYSTMIYAFVR-------VRDFKRA 644
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 23/300 (7%)
Query: 130 ACNQLLILYKRLDKKKVADVLLLM-----EKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
AC+ +L+ L ++++AD +LL+ +KE + + Y I S +V
Sbjct: 240 ACS---VLFTLLGRERMADYILLLLSNLPDKEEFRDVRL-YNAAISGLSASQRYDDAWEV 295
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEK-AEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
EAM + PD+ T AIL GR K + ++M +K + L+ +
Sbjct: 296 YEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFC 355
Query: 244 ELGKADQVARIWKLCE-----SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ G ++ I E SN V ++A+ K N +EE E +F M K S
Sbjct: 356 DEGLKEEALVIQTEMEKKGIRSNTI--VYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPS 413
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
Y L+ YA + L+++M + G ++ L+ + G +K +
Sbjct: 414 AATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY---GRTKKMSDMAA 470
Query: 359 KAQQQNK---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K KP SY ++ Y+ G F M + G + + +++ A+
Sbjct: 471 DAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF 530
>gi|255629649|gb|ACU15172.1| unknown [Glycine max]
Length = 233
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 1 MDAPDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIE 60
M+A IS+HS L K+ E+GN+L+ E++LAM LR R+++G+AL LSEWLE+ + L +
Sbjct: 152 MNAQGISLHSVLEKWLEKGNELTGEEVSLAMLYLRKRKLFGRALLLSEWLESKRSLSLL- 210
Query: 61 RDYASCLDLIAKLRGLQKAESYIQ 84
++ LDL+ + L K +SYI+
Sbjct: 211 KEICKSLDLLP-IAWLHK-QSYIE 232
>gi|356495758|ref|XP_003516740.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 554
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 144/363 (39%), Gaps = 41/363 (11%)
Query: 90 FRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVAD 148
+R + Y+ L V ++ N MK KGFP+ SF ++++ +Y+ KK +
Sbjct: 183 WRSKETYQIFLDYYVGAGRLEDTWSTINVMKQKGFPLNSFVYSKVVGIYRDNGMWKKAIE 242
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
VL + + + L +ID G+ +L ++ + M+ EG+ P+ T L K +
Sbjct: 243 VLEEIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHC 302
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM 268
G K+ + +M+ L ++ E GK
Sbjct: 303 KEGDFMKSFHLFTDMQEQGLYPDPKIFVTIISCMGEQGK--------------------- 341
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
WG + K E+ + R +K + + Y L+ +Y + ++ V+ +
Sbjct: 342 -----WGIIKKYFESMKI--RGNKEYGAV----YAVLVDIYGQYGKFQNARECVQALKSE 390
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + P + L + + G E+ ++L+ + +P ++++ + G
Sbjct: 391 GVLVSPSIFCVLANAYAQQGLCEQV-IMVLQIMEAEGIEPNIVMLNMLINAFGNAGRYME 449
Query: 389 TEKIFHRMRQVGYVARFKQFQTLVQAYINAK----TPAYGIRDRMRADNVFPNKALAAQV 444
++H +++ G + TL++A+I AK P I M D P++ A Q+
Sbjct: 450 AMSVYHHIKESGVSPDVVTYTTLMKAFIRAKKFDEVPI--IYKEMENDRCTPDRK-ARQM 506
Query: 445 AQV 447
QV
Sbjct: 507 LQV 509
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 152/354 (42%), Gaps = 25/354 (7%)
Query: 78 KAESYIQKIPESFRGEVVYRTL----LANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQ 133
K+++ + KIP+ E + L + C ++ +A + ++M+ KGF ++S A
Sbjct: 62 KSKTMLFKIPDIGENEELSSNLCSQFICECCKEGDLDRAMSLLSQMEAKGFHLSSTAYAC 121
Query: 134 LLILYKRLDKKKVADVL---LLMEKENVKLTQFSYKILIDIKGQSNDLTGM-DQVVEAMK 189
L+ + + AD+L ++ + KL ++ + +K L G+ + V++ M
Sbjct: 122 LIEALGNVGRTSEADMLFKEMICDGYKPKLNFYTSLLRGFLK---KGLLGLANGVLKEMD 178
Query: 190 SEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG--- 246
GI T I +YV GR E + + M+ + + ++ +Y + G
Sbjct: 179 YSGIWRSKETYQIFLDYYVGAGRLEDTWSTINVMKQKGFPLNSFVYSKVVGIYRDNGMWK 238
Query: 247 KADQVARIWKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTA 304
KA +V ++ E LD +C + I+ +GK +++EA +FK+M K + + + +
Sbjct: 239 KAIEVLE--EIRERGISLDTHICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNS 296
Query: 305 LLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQN 364
L+K + K L M E G + P + ++ E G+ I+ K +
Sbjct: 297 LIKWHCKEGDFMKSFHLFTDMQEQGLYPDPKIFVTIISCMGEQGKW----GIIKKYFESM 352
Query: 365 KF---KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
K K + Y +++D Y + G + + ++ G + F L AY
Sbjct: 353 KIRGNKEYGAVYAVLVDIYGQYGKFQNARECVQALKSEGVLVSPSIFCVLANAY 406
>gi|255661214|gb|ACU25776.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 426
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 123/277 (44%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K GI PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSKLKRSGITPDLVAYNSMINVFGKARL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E + + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRVAGVMPNTVSYSTLLTMYVENKRFREALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L+ +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLDMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKD 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ ++ ++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IVQNVVTYNTMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A A+ R
Sbjct: 274 AMLFQKLRVSGIEIDQVLYQTMIVAYERAGLVAHAKR 310
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/384 (19%), Positives = 155/384 (40%), Gaps = 47/384 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQ--KIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +++ K R ++A S I ++ V Y TLL V ++A VF M+
Sbjct: 82 YNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTLLTMYVENKRFREALSVFAEMR 141
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +LD K AD L M K ++ SY L+ + G +
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 201
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + I + T + Y EKA +++EM+ ++ + T ++
Sbjct: 202 EAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +F+++ + ++
Sbjct: 262 SIWGKVGKLDRAA--------------------------------MLFQKLRVSGIEIDQ 289
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 290 VLYQTMIVAYERAGLVAHAKRLLHELKRP----NNIPRDTAIHILAGAGRIEEATWVFRQ 345
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY-- 415
A + K +F + + +Y K ++ ++F +MR +GY ++ AY
Sbjct: 346 AIDAGEVKDITVFERMISLFSKYKKYTNV---VEVFEKMRGLGYFPDSNVIAVVLNAYGK 402
Query: 416 INAKTPAYGIRDRMRADN-VFPNK 438
++ A G+ M+ + VFP++
Sbjct: 403 LHKFENANGVYMEMQDEGCVFPDE 426
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RDRALSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F ++ ++ Y +++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSKLKRSGITPDLVAYNSMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ ++ + + L+ +M +G +++ L+ ++VE +A S+ + ++
Sbjct: 89 FGKARLFREARSLISEMRVAGVMPNTVSYSTLLTMYVENKRFREALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLDMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 139/341 (40%), Gaps = 24/341 (7%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDK-GFP--VTSFACNQLLILYKRLDKKKVADVL 150
V Y + V A ++ +M +K P VT A L+ RLD+ +A +
Sbjct: 43 VTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA-MAVLE 101
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
++EK N T +Y ++ID ++ + ++ M G PD+ L K
Sbjct: 102 QMVEKGNSP-TLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKS 160
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD----- 265
G+ E+A A+ KE N ++H T + Y L D + + ++ E+ D
Sbjct: 161 GKPEEAYALYKEA---NARKHHATAVPDVVTYTSL--IDGLCKAGRILEARQVFDDEAVE 215
Query: 266 --------VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSK 317
+ I+ KL +VEE F M + Y AL+ + KM+ K
Sbjct: 216 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPK 275
Query: 318 GKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIM 377
+ +QM +SG + + ++ ++ + G V +A + L +++ + +Y +M
Sbjct: 276 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV-TYSALM 334
Query: 378 DQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
D + G++ + ++F RM G + +++ A
Sbjct: 335 DGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRA 375
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 7/244 (2%)
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
V+E G EPD T + R + A +LK+M+ T L+
Sbjct: 28 SVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGL 87
Query: 243 AELGKADQ-VARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
+ G+ D+ +A + ++ E ++P L I+ K +VEEA +F M +
Sbjct: 88 LKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDA 147
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPL----AWDALVKLHVEGGEVEKADS 355
YTAL+K + L K+ H + + +L+ + G + +A
Sbjct: 148 FVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQ 207
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + F P +Y I+D K G + + FH MR GY + L+ +
Sbjct: 208 VFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGF 267
Query: 416 INAK 419
+ AK
Sbjct: 268 MKAK 271
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 105/289 (36%), Gaps = 39/289 (13%)
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSE-GIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+Y LID ++ + QV + E G PD+ T + GR E+ E
Sbjct: 188 TYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 247
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCMAAI--EAWGKLNK 279
M + T L+ + + + R+++ + +S + I + K +
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307
Query: 280 VEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDA 339
V EA A F M + + Y+AL+ + +S +L ++M + GC ++++
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367
Query: 340 LVKLHVEGGEVEKA------------------------------DSI-----LLKAQQQN 364
+++ G++ KA D++ L ++
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427
Query: 365 KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
P SY ++MD + G + +IF M G F TL++
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIR 476
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 133/323 (41%), Gaps = 31/323 (9%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
+ Y T+L+ V +A++ F+ M +G+ A N LL LYK + KVA+ L
Sbjct: 116 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYK---EGKVAEAWGL 172
Query: 153 -----MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMK------SEGIEPDSSTQA 201
M V +Y LID +++ EAMK ++G PD+ T
Sbjct: 173 FKTMDMADRKVAPDLITYNTLID------GFCRVEKTDEAMKLFKDVIAKGYMPDTVTYN 226
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES- 260
+ ++AE M K+M + T ++L + +G +AR +L E
Sbjct: 227 SILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVG---NMARCLELYEEM 283
Query: 261 -----NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKML 315
+P + +C A I+ K KV++A V + MSK Y LL ++
Sbjct: 284 TEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV 343
Query: 316 SKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYML 375
K +L M ++GC +++ ++ + +V A +L + K P ++ +
Sbjct: 344 DKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA-RVLFDRMIERKLVPDVVTFNI 402
Query: 376 IMDQYAKRGDIHSTEKIFHRMRQ 398
+MD K G + + + M +
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSE 425
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 124/330 (37%), Gaps = 13/330 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
V Y T+++ V +A E+ M +KG ++ R K AD L
Sbjct: 11 VTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHK 70
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + +Y LI+ + ++ +++E M S+G EPD+ T + G+
Sbjct: 71 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGK 130
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES--------NPWL 264
+A+ M LL + GK VA W L ++ P L
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK---VAEAWGLFKTMDMADRKVAPDL 187
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
I+ + ++ K +EA +FK + T Y ++L A + + +++ K+
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M +SGC + ++ H G + + L + + +F P ++D K
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLE-LYEEMTEKRFSPDVLLCNAVIDMLCKAK 306
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ K+ M ++G V + L+
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDG 336
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 135/350 (38%), Gaps = 50/350 (14%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF---RGEVVYRTLLANCVAGNNVKKAEEVFNRM 119
Y S L +A+ + +AE +K+ +S G L +C GN + + E++ M
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGN-MARCLELYEEM 283
Query: 120 KDKGFPVTSFACNQLLILYKRLDKKKVAD---VLLLMEKENVKLTQFSYKILIDIKGQSN 176
+K F CN ++ + + KKV D VL M K +Y IL+D ++N
Sbjct: 284 TEKRFSPDVLLCNAVIDMLCK--AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 341
Query: 177 DLTGMDQVVEAMKSEG-----------------------------------IEPDSSTQA 201
+ ++ M G + PD T
Sbjct: 342 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 401
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCES 260
IL G+ ++A+ +L M N+ TC L+ + D+ R+++ + E
Sbjct: 402 ILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461
Query: 261 NPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTK--HYTALLKVYADHKMLS 316
DV I G + K+ +A FK M K+ + S YT L+ + +
Sbjct: 462 GTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVD 521
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
+ D +QM SGC +A++ L+ + G +AD L +A ++ F
Sbjct: 522 QAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADR-LTQAMKEKGF 570
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 42/231 (18%), Positives = 87/231 (37%), Gaps = 8/231 (3%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M +G EPD T + + G+ +A M++EM + T +++ GK
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 248 ADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
D+ ++ + C +N A I K +E A + + M+ + Y
Sbjct: 61 VDEADELFHKMIERGCSANTV--AYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
+L +S+ K M G +A++ L+ + G+V +A +
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 363 QN-KFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+ K P +Y ++D + + K+F + GY+ + +++
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSIL 229
>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
succulentifolia]
Length = 382
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 121/276 (43%), Gaps = 7/276 (2%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y LI++ + D + + +K G PD + + A +++ EM
Sbjct: 8 YSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLISEMR 67
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVE 281
+ + + LL +Y E K + ++ ++ E LD+ C I+ +G+L +
Sbjct: 68 TAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAK 127
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
EA+ +F M K + + Y LL+VY D ++ + L + M + +++++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++ + E EKA++ L++ Q +P +Y I+ + K G + +F ++R G
Sbjct: 188 MIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 246
Query: 402 VARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+QT++ AY A A+ R + R DN+
Sbjct: 247 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 282
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/358 (18%), Positives = 139/358 (38%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + + A S I ++ + Y TLL V +A VF M+
Sbjct: 43 YNAMINVFGKAKLFRDARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMR 102
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 103 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 162
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 163 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 222
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A + F+++ + +
Sbjct: 223 SIWGKVGKLDRAAML--------------------------------FQKLRSSGVDIDQ 250
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
Y ++ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 251 VLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIAIHILAGAGRIEEATWVFRQ 306
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A K +F + + +Y K G++ ++F +MR +GY ++ AY
Sbjct: 307 AIDAGXVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRGLGYFPDSNVIALVLNAY 361
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/260 (18%), Positives = 118/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + + + LM+++N++ +Y +
Sbjct: 127 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSM 186
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 187 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 246
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 247 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 303
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 304 FRQAIDAGXVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGK 363
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 364 LH----EFDKANDVYMEMQE 379
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 140/316 (44%), Gaps = 16/316 (5%)
Query: 107 NNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQF 163
+NVK VF + + GF + A N L+ + L V ++L + M++ V+ + F
Sbjct: 114 DNVK---SVFCKFRGMGFLMNVSAANSLIKSFGSLGM--VEELLWVWRGMKENGVEPSLF 168
Query: 164 SYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM 223
+Y L++ S + ++V+E M++ I PD T + K Y G+ +KA ++M
Sbjct: 169 TYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDM 228
Query: 224 EGDNLKEHRWTCRLLL-PLYAELGKADQVARIWKLCESNPWLDVCMAA----IEAWGKLN 278
E N+ + T L+ YAE G D ++ + N L++ A I K
Sbjct: 229 ELRNVAPDKITYMTLIQACYAE-GDFDLCLSLYHEMDEN-GLEIPPHAYSLVIGGLCKEG 286
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
K E AVF++M + K++ YTAL+ A + + L ++M + G + +
Sbjct: 287 KCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYG 346
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+V + G +++A L+ + N Y ++D K G +H EK+F M +
Sbjct: 347 VVVNCMCKSGRLDEAME-YLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVK 405
Query: 399 VGYVARFKQFQTLVQA 414
G + L+ A
Sbjct: 406 KGCPPDSYCYNALIDA 421
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 15/231 (6%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
++ Y TL+ C A + +++ M + G + A + L++ + K + +
Sbjct: 237 KITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYS--LVIGGLCKEGKCVEGYAV 294
Query: 153 MEK---ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
EK + K+ Y LID + ++ + E MK EG+EPD T ++
Sbjct: 295 FEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCK 354
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE-----SNPWL 264
GR ++A ++ +E + L L LGKA +V KL E P
Sbjct: 355 SGRLDEA---MEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPD 411
Query: 265 DVCM-AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLK-VYADHK 313
C A I+A K K +EA A FKRM + YT ++ ++ +HK
Sbjct: 412 SYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHK 462
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 5/166 (3%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFP---VTSFACNQLLILYKRLDKKKVADVLL 151
+Y L+ + N+ +A +F RMK +G VT + RLD+ + L
Sbjct: 309 IYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDE--AMEYLE 366
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
V + Y LID G++ + +++ E M +G PDS L G
Sbjct: 367 FCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCG 426
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKL 257
+ ++A A K ME + + +T +++ K ++ ++W +
Sbjct: 427 KTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDM 472
>gi|410110115|gb|AFV61137.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hederifolia]
Length = 364
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 7/263 (2%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ +K G PD + + +A +++ EM+ + + + LL +Y
Sbjct: 9 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYV 68
Query: 244 ELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
E K + ++ ++ E LD+ C I+ +G+L +EA+ +F M K + +
Sbjct: 69 ENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 128
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y LL+VY D ++ + L + M + +++++ ++ + E EKA++ L++
Sbjct: 129 SYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANN-LIQE 187
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
Q +P +Y I+ + K G + +F ++R G FQT++ AY A
Sbjct: 188 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGL 247
Query: 421 PAYGIR---DRMRADNVFPNKAL 440
A+ R + R DN+ + A+
Sbjct: 248 VAHAKRLLHELKRPDNIPRDTAI 270
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 145/358 (40%), Gaps = 44/358 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 25 YNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 84
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLT 179
+ + CN ++ +Y +L K AD L M K ++ SY L+ + G +
Sbjct: 85 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 144
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ M+ + IE + T + Y EKA +++EM+ ++ + T ++
Sbjct: 145 EAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 204
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
++ ++GK D+ A +++ S + VE + +F+ M
Sbjct: 205 SIWGKVGKLDRAAMLFQKLRS-----------------SGVEIDQILFQTM--------- 238
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
+ Y +++ K L+ ++ + D + + G +E+A + +
Sbjct: 239 ------IVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHILAGAGRIEEATYVFRQ 288
Query: 360 AQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
A + K +F + ++ +Y K ++ ++F +MR +GY ++ AY
Sbjct: 289 AIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGYFPDSDVIAIVLNAY 343
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+A ++F R+ ++ Y A++ V+ K+ + + L+ +M +G ++ L+
Sbjct: 5 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLL 64
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++VE + +A S+ + ++ + + ++I D Y + G +K+F MR++G
Sbjct: 65 TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGI 123
Query: 402 VARFKQFQTLVQAYINAK 419
+ TL++ Y +A+
Sbjct: 124 EPNVVSYNTLLRVYGDAE 141
>gi|410110063|gb|AFV61111.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
barbata]
Length = 364
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 7/263 (2%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ +K G PD + + +A +++ EM+ + + + LL +Y
Sbjct: 9 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYSTLLTMYV 68
Query: 244 ELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
E K + ++ ++ E LD+ C I+ +G+L +EA+ +F M K + +
Sbjct: 69 ENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 128
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y LL+VY D ++ + L + M + +++++ ++ + E EKA++ L++
Sbjct: 129 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN-LIQE 187
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
Q +P +Y I+ + K G + +F ++R G FQT++ AY A
Sbjct: 188 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGL 247
Query: 421 PAYGIR---DRMRADNVFPNKAL 440
A+ R + R DN+ + A+
Sbjct: 248 VAHAKRLLHELKRPDNIPRDTAI 270
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 138/314 (43%), Gaps = 17/314 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVK--LTQFSYK 166
++A + + MK G + + + LL +Y ++ KK + L + E +K L +
Sbjct: 39 REARSLISEMKXAGVMPNTTSYSTLLTMY--VENKKFLEALSVFSEMREIKCLLDLTTCN 96
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
I+ID+ GQ D++ M+ GIEP+ + L + Y +A + + M+
Sbjct: 97 IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 156
Query: 227 NLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
N++++ T ++ +Y E KA+ + + + P I WGK+ K++ A
Sbjct: 157 NIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 216
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F+++ + ++ + ++ Y +++ K L+ ++ + D + +
Sbjct: 217 AMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHI 272
Query: 344 HVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
G +E+A + +A + K +F + ++ +Y K ++ ++F +MR +GY
Sbjct: 273 LAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNV---XEVFDKMRGLGY 329
Query: 402 VARFKQFQTLVQAY 415
++ AY
Sbjct: 330 FPDSNVIAVVLNAY 343
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+A ++F R+ ++ Y A++ V+ K+ + + L+ +M +G ++ L+
Sbjct: 5 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYSTLL 64
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++VE + +A S+ + ++ + + ++I D Y + G +K+F MR++G
Sbjct: 65 TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGI 123
Query: 402 VARFKQFQTLVQAYINAK 419
+ TL++ Y +A+
Sbjct: 124 EPNVVSYNTLLRVYGDAE 141
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 57/340 (16%), Positives = 137/340 (40%), Gaps = 43/340 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +++ K + ++A S I ++ + Y TLL V +A VF+ M+
Sbjct: 25 YNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMR 84
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL----------------------------- 151
+ + CN ++ +Y +L K AD L
Sbjct: 85 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFG 144
Query: 152 -------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
LM+++N++ +Y ++ I G++ + + +++ M+S GIEP+S T + +
Sbjct: 145 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTII 204
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNP 262
+ G+ ++A + +++ ++ + + ++ Y G R+ + N
Sbjct: 205 SIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNI 264
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
D + + G ++EEA VF++ + + ++ + + +K S ++
Sbjct: 265 PRDTAIHILAGAG---RIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNVXEVF 321
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
+M G ++ + + E +KA+ + ++ Q+
Sbjct: 322 DKMRGLGYFPDSNVIAVVLNAYGKLXEFDKANDVYMEMQE 361
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 36/262 (13%)
Query: 94 VVYRTLLAN-CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI--LYKRLDKKKVADVL 150
VVY +L++ C+AG + A V +++K GF + +C +LI K+ ++V ++L
Sbjct: 499 VVYYSLISGLCIAGR-MNDASVVVSKLKLAGFSLDR-SCYNVLISGFCKKKKLERVYELL 556
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
ME+ VK +Y LI G++ D +V+E M EG+ P T + Y S
Sbjct: 557 TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCS- 615
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
+K E M ++ E+ +V P +
Sbjct: 616 -KKNVDEGM--------------------KIFGEMCSTSKVP---------PNTVIYNIL 645
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I+A + N V+ A ++ + M + +T Y A+LK D KML K +L+ +M E C
Sbjct: 646 IDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEAC 705
Query: 331 HIGPLAWDALVKLHVEGGEVEK 352
+ + L + GE+EK
Sbjct: 706 RPDYITMEVLTEWLSAVGEIEK 727
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 146/377 (38%), Gaps = 48/377 (12%)
Query: 112 AEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILID 170
A EV + + G V + +CN LL L + D K++ ++L MEK ++ + ++ IL++
Sbjct: 265 AWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVN 324
Query: 171 IKGQSNDLTGMDQVVEAMKSEG------IEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
++ + QV + ++ +G +EPD L G++E ++L+EM+
Sbjct: 325 HLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMK 384
Query: 225 GDNL-KEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKV 280
N+ + + T L+ + + G D+ +++ P + ++ K +V
Sbjct: 385 MGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRV 444
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
A F M K + YTAL+ + +++ ++M SGC + + +L
Sbjct: 445 HRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSL 504
Query: 341 VKLHVEGGEVEKADSI----------------------------------LLKAQQQNKF 366
+ G + A + LL ++
Sbjct: 505 ISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGV 564
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
KP +Y ++ K GD + K+ +M + G + ++ AY + K G++
Sbjct: 565 KPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMK 624
Query: 427 ---DRMRADNVFPNKAL 440
+ V PN +
Sbjct: 625 IFGEMCSTSKVPPNTVI 641
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 146/352 (41%), Gaps = 19/352 (5%)
Query: 62 DYASC---LDLIAKLRGLQKAESYIQKIPE-SFRGEVVYRTLLAN--CVAGNNVKKAEEV 115
D ASC L + + R +++ + ++ + R VV +L N C A + +A +V
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKA-RRIDEALQV 338
Query: 116 FNRMKDKGFPVTSFACNQLLILYKRLDK----KKVADVLLLMEKENV----KLTQFSYKI 167
F+R++ KG +++ +D K D L L+E+ + + +Y
Sbjct: 339 FDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNC 398
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
LID ++ + ++ M EG++P+ T L GR +A EM+G
Sbjct: 399 LIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKG 458
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMAAIEAWGKLNKVEEAE 284
LK + T L+ + + ++ + ++ S +P V + I ++ +A
Sbjct: 459 LKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDAS 518
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
V ++ L Y L+ + K L + +L+ +M E+G + ++ L+
Sbjct: 519 VVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYL 578
Query: 345 VEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ G+ A ++ K ++ +P +Y I+ Y + ++ KIF M
Sbjct: 579 GKTGDFATASKVMEKMIKEG-LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEM 629
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 146/371 (39%), Gaps = 51/371 (13%)
Query: 78 KAESYIQKIPE----------SFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
K E +++K+ E F V Y L++ + A +F+ MK+ G T
Sbjct: 209 KQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPT 268
Query: 128 SFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVE 186
+ LL +Y +LDK +K DV+ M+ + LT F+Y I G++ + +V
Sbjct: 269 AKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFL 328
Query: 187 AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
M +G +PD L GR E + ++ME K + T ++ E
Sbjct: 329 DMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECK 388
Query: 247 KADQVARIW---------------------KLCESN--------------PWLDVCMAA- 270
A W C++N C AA
Sbjct: 389 APASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAY 448
Query: 271 ---IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAE 327
I + GK+ + E A +F + + S + Y ++K + LS+ DL +M +
Sbjct: 449 CSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEK 508
Query: 328 SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIH 387
G A++AL+ V G +++A S LL+ +N P +S+ +I++ A+ G
Sbjct: 509 LGSKPDVYAYNALMSGMVRAGMIDEAQS-LLRTMDENGCSPDLNSHNIILNGLARTGVPD 567
Query: 388 STEKIFHRMRQ 398
++F +M+
Sbjct: 568 RAIEMFAKMKS 578
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLC-ESNPWLDVCM--AA 270
KA ++ +++G K T ++ + + G ++V I+ ++C + N + D A
Sbjct: 181 KALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSAL 240
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
I A+GKL + A +F M + + K YT LL +Y + K D++K+M + GC
Sbjct: 241 ISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGC 300
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ + +K + G V+ A + L ++ KP +++ K G + T
Sbjct: 301 TLTVFTYTEWIKGLGKAGRVDDAYRVFLD-MIKDGCKPDVVLINSLINILGKVGRLEVTL 359
Query: 391 KIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKALAAQVAQV 447
K+F +M + T+++A K PA ++M+ + P+ + + +
Sbjct: 360 KLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSIL--I 417
Query: 448 DAFRKT 453
D F KT
Sbjct: 418 DGFCKT 423
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 140/377 (37%), Gaps = 75/377 (19%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVAD----VL 150
+Y TLL + V+KA +V MKDKG +T F + + K L K D V
Sbjct: 271 IYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWI---KGLGKAGRVDDAYRVF 327
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSN-------------------DLTGMDQVVEA---- 187
L M K+ K LI+I G+ ++ + V++A
Sbjct: 328 LDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFEC 387
Query: 188 -------------MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN------- 227
MK GI P S T +IL + R EKA +L+EM+
Sbjct: 388 KAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAA 447
Query: 228 ----------LKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKL 277
+K + L L L G + AR++ + I+ +GK
Sbjct: 448 YCSLINSLGKVKRYEAANELFLELKENCGHSS--ARVYAV------------MIKHFGKC 493
Query: 278 NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAW 337
++ EA +F M K K Y AL+ M+ + + L++ M E+GC +
Sbjct: 494 GRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSH 553
Query: 338 DALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMR 397
+ ++ G ++A + K + + KP SY ++ + G K+ M
Sbjct: 554 NIILNGLARTGVPDRAIEMFAK-MKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMN 612
Query: 398 QVGYVARFKQFQTLVQA 414
G+ + ++++A
Sbjct: 613 LKGFEYNNITYTSILEA 629
>gi|410110101|gb|AFV61130.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
viburnoides]
Length = 337
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 118/263 (44%), Gaps = 7/263 (2%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
+ +K G PD + + +A +++ EM+ + + + LL +Y
Sbjct: 9 IFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYV 68
Query: 244 ELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
E K + ++ ++ E LD+ C I+ +G+L +EA+ +F M K + +
Sbjct: 69 ENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 128
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y LL+VY D ++ + L + M + +++++ ++ + E EKA++ L++
Sbjct: 129 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANN-LIQE 187
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT 420
Q +P +Y I+ + K G + +F ++R G FQT++ AY A
Sbjct: 188 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGL 247
Query: 421 PAYGIR---DRMRADNVFPNKAL 440
A+ R + R DN+ + A+
Sbjct: 248 VAHAKRLLHELKRPDNIPRDTAI 270
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 133/300 (44%), Gaps = 17/300 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVL-LLMEKENVK--LTQFSYK 166
++A + MK G + + + LL +Y ++ KK + L + E +K L +
Sbjct: 39 REARSLIGEMKAAGVMPNTASYSTLLTMY--VENKKFLEALSVFSEMREIKCLLDLTTCN 96
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
I+ID+ GQ D++ M+ GIEP+ + L + Y +A + + M+
Sbjct: 97 IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 156
Query: 227 NLKEHRWTCRLLLPLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEA 283
N++++ T ++ +Y E KA+ + + + P I WGK+ K++ A
Sbjct: 157 NIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRA 216
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKL 343
+F+++ + ++ + ++ Y +++ K L+ ++ + D + +
Sbjct: 217 AMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDTAIHI 272
Query: 344 HVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
G +E+A + +A + K +F + ++ +Y K ++ ++F +MR +GY
Sbjct: 273 LAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSKYKKYSNV---VEVFDKMRGLGY 329
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+A ++F R+ ++ Y A++ V+ K+ + + L+ +M +G ++ L+
Sbjct: 5 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLL 64
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
++VE + +A S+ + ++ + + ++I D Y + G +K+F MR++G
Sbjct: 65 TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGI 123
Query: 402 VARFKQFQTLVQAYINAK 419
+ TL++ Y +A+
Sbjct: 124 EPNVVSYNTLLRVYGDAE 141
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 152/397 (38%), Gaps = 66/397 (16%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKKKVADVLLL 152
+ Y L+ ++KA E+ M G S L+ Y R + + ++L
Sbjct: 369 ITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 428
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
MEK N+ + SY +I+ DL+ ++++E M G++P+ +IL Y S GR
Sbjct: 429 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488
Query: 213 KEKAEAMLK-----------------------------------EMEGDNLKEHRWTCRL 237
E+A +L E++G LK T
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548
Query: 238 LLPLYAELGKADQVARIWK------LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMS 291
+ Y++ GK + A+ + L +NP V I K + EA ++F+R+
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV---LINGHFKAGNLMEALSIFRRLH 605
Query: 292 KTWKKLSTKHYTALLKVYADHKMLSKGK-----DLVKQMAESGCHIGPLAWDALVKLHVE 346
+ +A + H +L G+ + ++ E G + +L+ +
Sbjct: 606 ALGVLPDVQTCSAFI-----HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 660
Query: 347 GGEVEKA----DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
GEVEKA D + LK N F Y ++D K GDI K+F M + G
Sbjct: 661 QGEVEKAFELHDEMCLKGIAPNIF-----IYNALVDGLCKSGDIQRARKLFDGMPEKGLE 715
Query: 403 ARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPN 437
+ T++ Y ++ A+ + M + V P+
Sbjct: 716 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPH 752
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 7/292 (2%)
Query: 114 EVFNRMKDK--GFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDI 171
+V+N M D GF V ++ + L K D + VL+ M+++ + +F Y ++I+
Sbjct: 214 KVYNGMLDAKMGFDVYTYT-YLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEG 272
Query: 172 KGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEH 231
Q D+ ++ +M +G+ P++ T I+ R +A+ +EM+ LK
Sbjct: 273 MCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332
Query: 232 RWTCRLLLPLYAELGKADQVARIWKL---CESNPWLDVCMAAIEAWGKLNKVEEAEAVFK 288
C L+ + G D+V RI + C L I K K+E+A + K
Sbjct: 333 YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 392
Query: 289 RMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGG 348
M K +++ + L++ Y + + +L+ +M + +++ A++
Sbjct: 393 GMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 452
Query: 349 EVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
++ A+ LL+ + KP Y +++ YA G I ++ M G
Sbjct: 453 DLSLANK-LLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 11/303 (3%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG----EVVYRTLLANCVAGNNVKKAEEVFNR 118
Y + +D + K +Q+A +PE +G V Y T++ NV +A +F+
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPE--KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743
Query: 119 MKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
M KG SF N L+ K D +K ++ M ++ T S+ LID +S
Sbjct: 744 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCK 802
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ Q+ + M ++ I PD T + + G+ E+A + KEM+ NL T
Sbjct: 803 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 862
Query: 238 LLPLYAELGKADQVARIW-KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
L+ Y +LG++ +V ++ K+ D + + + EA R K
Sbjct: 863 LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 922
Query: 297 LSTKH--YTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
+ TK + L+ + L++ L+ +M E G A + LV+ E G++++A
Sbjct: 923 MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEAT 982
Query: 355 SIL 357
+
Sbjct: 983 RVF 985
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 138/348 (39%), Gaps = 45/348 (12%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKI 167
V++A +VF+ +K+KG F + L+ + K+ + +K ++ M + + F Y
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
L+D +S D+ ++ + M +G+EPDS T + + Y +A ++ EM
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 228 LKEHRWTCRLLLPLYAELGKADQVARIWK---------LCESNPWLD------------- 265
++ H + L+ + G ++ +++ N +D
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQ 808
Query: 266 --------------VCMAAIEAW-GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
V + W K K+EEA +FK M + + T YT+L+ Y
Sbjct: 809 LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYN 868
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
S+ L ++M G + + ++ H + + +A K + + K M
Sbjct: 869 KLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA----FKLRDEVVGKGML 924
Query: 371 SS---YMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+ + L++ KR D+ K+ M ++G TLV+++
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSF 972
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/298 (20%), Positives = 127/298 (42%), Gaps = 26/298 (8%)
Query: 149 VLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYV 208
VL M + + + +SY IL+D + L+ +V MK G+ PD+ T L Y
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 209 SGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD-- 265
S G+ + A+++L+EM +N + +TC +LL ++G+ + + K+ E LD
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV--- 322
C ++ ++++A + K M +V+ + + G +
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGM----------------RVHGSAALGNLGNSYIGLV 511
Query: 323 -KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ E+ C + + L+ + G +A ++ + + K +P +Y + + +
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFC 570
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI--NAKTPAYGIRDRMRADNVFPN 437
K+G I S ++ M + G + + +L+ N +G+ D M+ + PN
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 142/331 (42%), Gaps = 29/331 (8%)
Query: 87 PESFRGEVVYRTLL-ANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KK 144
P+++ ++ R L ++CV A E+F+ M +KG F L+ Y +
Sbjct: 145 PQTYTFNLLIRALCDSSCV-----DAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDI---KGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
K ++L ME V + Y ++ +G+++D +++VE M+ EG+ PD T
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDD---SEKMVEKMREEGLVPDIVTFN 256
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNL----KEHRWTCRLLLPLYAELGKADQVARIWKL 257
G+ A + +ME D + + T L+L + ++G + +++
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES 316
Query: 258 CESNPWLDVCMAAIEAWG-------KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYA 310
N L A+++++ + K EAE V K+M+ S Y L+
Sbjct: 317 IRENDDL----ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
MLS K +V M +G + + L+ + G+V+ A S+L + + N +
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432
Query: 371 SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ +L+ + K G I E++ +M + GY
Sbjct: 433 TCNILLHSLW-KMGRISEAEELLRKMNEKGY 462
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 1/156 (0%)
Query: 259 ESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
E+ P + + +E+ K +VE ++K M T + L++ D +
Sbjct: 107 ENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAA 166
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
++L +M E GC + LV+ + + G +K LL A + P Y I+
Sbjct: 167 RELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE-LLNAMESFGVLPNKVIYNTIVS 225
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ + G +EK+ +MR+ G V F + + A
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 122/312 (39%), Gaps = 37/312 (11%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
+ Y TLL +A+ +F M + S A N + + + K A VL
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
MEK+ + +Y LI G N + + +++ MK +GI P+ T ++ G +
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
E A +L EM N+ + ++ + L IE
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYL--------------------------------IE 672
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
A+ K+ + A+ VF+ + + ++ A ++L K +L++ + + G +
Sbjct: 673 AFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLL-KATELLEAVLDRGFEL 731
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQN-KFKPMFSSYMLIMDQYAKRGDIHSTEK 391
G + LV+ + E+E A IL K + F P ++ M ++D K G+
Sbjct: 732 GTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP--AALMPVIDGLGKMGNKKEANS 789
Query: 392 IFHRMRQVGYVA 403
+M ++ V
Sbjct: 790 FADKMMEMASVG 801
>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 636
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 152/377 (40%), Gaps = 16/377 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY----KRLDKKKVADV 149
+ + L+ V + +A F RM G T+ N L+ Y + + ++V D+
Sbjct: 150 IFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDM 209
Query: 150 LLLMEKEN---VKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
+ V+ +Y IL+ + L +VV M++ G +PD T LA
Sbjct: 210 MASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASA 269
Query: 207 YVSGGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLPLY---AELGKADQVARIWKLCESNP 262
Y +AE ++ EM + L+ T +++ Y LG+A + R K P
Sbjct: 270 YAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLP 329
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
+ V ++ + N + + V M + K Y+ L + ++K +
Sbjct: 330 NVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVF 389
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+M E+G P + L K +V + EKA+ LL+ + +P ++ ++ +
Sbjct: 390 DKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEE-LLRQMGRLGVRPNVVTFTTVISGWCS 448
Query: 383 RGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGIRDRMRADNVFPNKAL 440
D+ + +++ MR G + F+TL+ Y K P A + M+ V P +
Sbjct: 449 VADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQTT 508
Query: 441 AAQVAQVDAFRKTAVSE 457
VA DA++ + E
Sbjct: 509 YCLVA--DAWKAVGLVE 523
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 137/333 (41%), Gaps = 39/333 (11%)
Query: 86 IPESFRGEVVYRTLLANCVAGNN-VKKAEEVFNRMKDKG-FP-VTSFACNQLLILYKRLD 142
+ E +V ++ NC+ N +++A+ + N+M ++G P +T+F N L++ +
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTF--NTLIVALCSGN 374
Query: 143 K-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
+ ++ D+ + + + +++ ILI+ + D ++ E MKS G PD T
Sbjct: 375 RLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYN 434
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN 261
L + S G+ KA +LKEME T +
Sbjct: 435 TLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTI----------------------- 471
Query: 262 PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
I+ K ++EEAE VF +M + + L+ K + L
Sbjct: 472 ---------IDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL 522
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
+ QM G + +++++ + + G+++KA I L+ N F+ +Y +++
Sbjct: 523 ISQMISEGLQPNNITYNSILTHYCKQGDIKKAADI-LQTMTANGFEVDVVTYGTLINGLC 581
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
K G K+ MR G A K + ++Q+
Sbjct: 582 KAGRTQVALKLLRGMRIKGMRATPKAYNPVIQS 614
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 143/367 (38%), Gaps = 44/367 (11%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL 152
E + TL+ V ++K A V RM + G T N L+ Y +L +V D L
Sbjct: 220 ETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKL--GRVEDALGY 277
Query: 153 MEKE---NVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
+++E + Q +Y ++ Q+ + +V++ M EG +PD T I+
Sbjct: 278 IQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 337
Query: 210 GGRKEKAEAMLKEM-EGDNLKEHRWTCRLLLPLYA--ELGKADQVARIWKLCESNPWLDV 266
G+ E+A+ +L +M E L + L++ L + L +A +AR L +P +
Sbjct: 338 NGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYT 397
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
I A K+ + A +F+ M + Y L+ L K DL+K+M
Sbjct: 398 FNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEME 457
Query: 327 ESGCHIGPLAWDALV-----KLHVEGGEVEKADSILLKAQQQNK---------------- 365
+GC + ++ ++ K+ +E E E D + L+ +N
Sbjct: 458 SAGCPRSTVTYNTIIDGLCKKMRIEEAE-EVFDQMDLQGISRNAITFNTLIDGLCKDKRI 516
Query: 366 --------------FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
+P +Y I+ Y K+GDI I M G+ + TL
Sbjct: 517 DDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTL 576
Query: 412 VQAYINA 418
+ A
Sbjct: 577 INGLCKA 583
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 135/326 (41%), Gaps = 10/326 (3%)
Query: 84 QKIPESFRGEVVYRTLLANCVAGN-NVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD 142
Q + FR VV T L +C+ N ++ A E+FN+M D G N L+ +
Sbjct: 177 QIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIG 236
Query: 143 KKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQA 201
+ A LL M K ++ ++ LID + + ++ + M + PD T
Sbjct: 237 RWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYT 296
Query: 202 ILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----K 256
L + GR ++A M ME + + T L+ + + + + +I+ K
Sbjct: 297 ALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK 356
Query: 257 LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLS 316
+N + I+ + + + + A+ VF +M + Y LL + +
Sbjct: 357 GLVANTITYTVL--IQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVE 414
Query: 317 KGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
K + K M + I + + +++ + G+VE A + + KP +Y +
Sbjct: 415 KALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKG-MKPNVITYTTM 473
Query: 377 MDQYAKRGDIHSTEKIFHRMRQVGYV 402
+ + +RG IH + +F +M++ G++
Sbjct: 474 ISGFCRRGFIHEADALFKKMKEDGFL 499
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 131/332 (39%), Gaps = 9/332 (2%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRM-KDKGFP-VTSFACNQLLILYKRLDKKKVADVLL-L 152
YR +L N + +A ++F RM + P + F +LL + ++ + V L
Sbjct: 50 YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFT--RLLSVIAKMKRFDVVISLFEQ 107
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M+ + ++ I+++ +S+ + M G EPD T L + R
Sbjct: 108 MQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNR 167
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMA 269
E A A+ ++ G + + T L+ + + I+ N P + +
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ ++ + +A + + M K + + +TAL+ + + + K+L K M +
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + AL+ G +++A + + N + P +Y ++ + K +
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQ-MFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDG 346
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTP 421
KIF+ M Q G VA + L+Q Y P
Sbjct: 347 TKIFYEMSQKGLVANTITYTVLIQGYCLVGRP 378
>gi|224054634|ref|XP_002298341.1| predicted protein [Populus trichocarpa]
gi|222845599|gb|EEE83146.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 13/293 (4%)
Query: 109 VKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKI 167
V+KA VF+RM +K A N +L Y + K L+ MEK +K ++
Sbjct: 61 VEKARRVFDRMVEKDL----VALNAMLSGYGQHGFAKEGFALMDKMEKLGIKPNVITWNS 116
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDN 227
LI Q D + ++ E M S G+EPD + + V R E A K+M G
Sbjct: 117 LISGFAQKGDDAMVSKMFELMISNGVEPDVISWTSVISGLVQNFRNEAAFDAFKQMLGRG 176
Query: 228 LKEHRWTCRLLLPLYAELG---KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAE 284
T +L A + + ++ + + V A ++ + K + EA
Sbjct: 177 FLPTSATISTVLAACATMANVRRGREIHGYAVVIRVEDDIYVRSALVDMYAKCGFISEAS 236
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES-GCHIGPLAWDALVKL 343
+F M + +T + +++ YA+H + +L QM +S G + L + A++
Sbjct: 237 VLFYMMPER----NTVTWNSMIFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLTA 292
Query: 344 HVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
G VE S+ L QQ+ K P Y ++D + G+++ + +M
Sbjct: 293 CSHAGMVEHGQSLFLLMQQKYKIVPRLEHYACMVDLLGRAGNLNEAYDMIKKM 345
>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 426
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 129/294 (43%), Gaps = 7/294 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFAPDLVAYNSMINVFXKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + LL ++ E + + ++ ++ E LD+ C
Sbjct: 95 FREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IEQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWVKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNVFPNKAL 440
+F ++R G +QT++ AY A A+ R + R DN+ + A+
Sbjct: 274 AMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAI 327
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 145/345 (42%), Gaps = 51/345 (14%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y S +++ K + ++A S I ++ + V Y TLL V +A VF M+
Sbjct: 82 YNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMR 141
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL----------------------------- 151
+ + CN ++ +Y +L K AD L
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFG 201
Query: 152 -------LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
LM+++N++ +Y ++ I G++ + + +++ M++ GIEP+S T + +
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTII 261
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNP 262
+V G+ ++A + +++ ++ + + ++ Y G R+ + N
Sbjct: 262 SIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Query: 263 WLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
D + + A G+L EEA VF++ + + L+ +++ +K S ++
Sbjct: 322 PRDTAIHILAAAGRL---EEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVF 378
Query: 323 KQMAE----SGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
+M E ++ L +A KLH E EKA+S+ ++ Q +
Sbjct: 379 DKMRERRYFPDSNVIALVLNAYGKLH----EFEKANSVYMEMQDE 419
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y +++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFAPDLVAYNSMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G +++ L+ +HVE +A S+ + ++
Sbjct: 89 FXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAE 198
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 128/284 (45%), Gaps = 5/284 (1%)
Query: 123 GFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G+P + + N L+ + + + K+A V + K ++ T S+ L++ + DL
Sbjct: 131 GYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEG 190
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
++ AM++ G++PD T ++L + + A + EM + L + T L+
Sbjct: 191 FRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDG 250
Query: 242 YAELGKADQVARIWK--LCES-NPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ + G+ D I+K L +S +P L I K +++A+ + MS K
Sbjct: 251 HCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPD 310
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
YT L+ L + K+M + + +A+ AL+ + G A+ +L
Sbjct: 311 KVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEK-ML 369
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYV 402
+ KP +Y +I++++ K+GD+ + K+ M++ GYV
Sbjct: 370 REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYV 413
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 1/154 (0%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V + TL+ V A E++ +M + N L+ L K+ D K+ D++
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + +K + +Y LID + DL + + M E I D L GR
Sbjct: 302 MSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
AE ML+EM LK T +++ + + G
Sbjct: 362 SVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 129/325 (39%), Gaps = 5/325 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLL 152
V + TL+ +A E+F+ M KG + N ++ L K + A +L
Sbjct: 164 VTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKK 223
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME+ + +Y LID + + + MK++GI PD T L + R
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
++A A+L EM N+ T +L+ + + GK + + K P + +
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ + V EA +F M K + Y L+ Y K + + L +M G
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
++++ L+ + G++ +A L + N P +Y +++D + K+G +
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQD-LFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKA 462
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQA 414
++F M+ + LV A
Sbjct: 463 FRLFRAMQSTYLKPNLVMYTILVHA 487
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/194 (17%), Positives = 83/194 (42%), Gaps = 3/194 (1%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
+M + K FSY ILI+ ++ + Q+ M +G+ P++ + L + G
Sbjct: 363 VMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLG 422
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
+ +A+ + + M + +T +LL + + G + R+++ +S P L +
Sbjct: 423 KLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYT 482
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ A K ++A +F + + + YT ++ +L + + + M
Sbjct: 483 ILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEAD 542
Query: 329 GCHIGPLAWDALVK 342
GC ++++ +++
Sbjct: 543 GCPPDEISYNVIIR 556
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 4/238 (1%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
V+E M+ + I+ D T I+ R +A +LK M D+L T L+ +
Sbjct: 211 VLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFF 270
Query: 244 ELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTK 300
GK + ++ P + I+ + + ++++A +V M T S
Sbjct: 271 GEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSEL 330
Query: 301 HYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKA 360
Y+ALL Y ML DL+ + G I L+ + GE+ KA I LK+
Sbjct: 331 TYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQI-LKS 389
Query: 361 QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
++ P +Y +++ + +H T++I RM++ G + + TL+ Y A
Sbjct: 390 MLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKA 447
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
++ KE + +Y L++ + ++ + +++ M + P+S++ IL YV G
Sbjct: 670 IICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRG 729
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKAD-QVARIWKLCESNPWLD--VCM 268
+ K+ + K M ++ T RLL+ +E G D V + K+ + D V
Sbjct: 730 QFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFD 789
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I ++ + +K+ A +F M S+K ++A++ L + +++ +M +
Sbjct: 790 ILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQV 849
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK---FKPMFSSYMLIMDQYAKRGD 385
G + ALV GE+++A + +++ K P + I+ + G
Sbjct: 850 GLQPNHTHYIALVNAKCRVGEIDRA----FRLKEEMKAIGIVPAEVAESSIIRGLCRCGK 905
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ +F M + G V F TL+ +
Sbjct: 906 LEEAVIVFSNMMRSGMVPTVATFTTLMHS 934
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 59/362 (16%), Positives = 136/362 (37%), Gaps = 42/362 (11%)
Query: 96 YRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLME 154
Y T++ + KA V + M+ G + + LL Y ++ A D+++ ++
Sbjct: 297 YTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLK 356
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + + ILID Q +++ Q++++M +GI+PD T + L +
Sbjct: 357 SRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMH 416
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-----KLCESNPWLDVCMA 269
+ + +L M+ + + L+ Y + G + + + +NP + A
Sbjct: 417 ETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIH--NA 474
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ A+ + + EAE + MS+ ++ + ++ Y + + + M G
Sbjct: 475 LLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYG 534
Query: 330 CHIGPLAWDALVKLHVEGGEVEKA-------------------DSILLKAQQ-------- 362
+ L++ +GG + +A +++LL +
Sbjct: 535 HSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEAL 594
Query: 363 -------QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+N P +Y +++ + ++G I + M + G V + L+
Sbjct: 595 DICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGL 654
Query: 416 IN 417
IN
Sbjct: 655 IN 656
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 137/351 (39%), Gaps = 43/351 (12%)
Query: 74 RGL-QKAESYIQKI-----PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVT 127
RGL QKA+S + P S VY T++ C +++A VF+RM++ G
Sbjct: 557 RGLFQKAKSLFNSLQKKDHPPSL---YVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFD 613
Query: 128 SFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVE 186
+ + L+ Y + + K A ++ +K V + +Y + +S +L G +V
Sbjct: 614 AVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYG 673
Query: 187 AMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELG 246
M+ IEP + T IL + G +LG
Sbjct: 674 EMQEADIEPSAKTYTILISLFSKLG--------------------------------DLG 701
Query: 247 KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+A Q + E I +G + +EA +F+ M K + Y LL
Sbjct: 702 RAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLL 761
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF 366
+A + ++ + L+ M GC + + L+ + G+ A+S LL Q
Sbjct: 762 DAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAES-LLHLMQDRGL 820
Query: 367 KPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
P Y ++ Y G + +IF+ ++ VG F+TLV+ +++
Sbjct: 821 YPDCRHYNEVIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRTLVKIHLD 871
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 137/315 (43%), Gaps = 18/315 (5%)
Query: 114 EVFNRMKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLLMEK---ENVKLTQFSYKILI 169
E + M+ +G P ++ LYK ++ +D L+L E E ++ Y I+I
Sbjct: 163 EFYEAMRQRGLVPSAHVYRTMIVTLYK---AERHSDALMLWEDLLVEKLEPNFVLYAIII 219
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
I + + M++ G PD + GR +++EA+ +M+ +
Sbjct: 220 HILNKEGRTEDAVHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIV 279
Query: 230 EHRWTCRLLLPLYAELGK-ADQVARIWKLCESNPWLD--VCMAAIEAWGKLNKVEEAEAV 286
++T +++ ++++ G+ A + ++ S D V + I +GK EEAE +
Sbjct: 280 PSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKI 339
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVE 346
FK M K YT++ KV A+ ++ L MAE G + W+ L+ V
Sbjct: 340 FKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVR 399
Query: 347 GGEVEKADSI---LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVA 403
G+VE+A + +++A N +Y +++ Y+K + E + MR+ G
Sbjct: 400 IGDVEQATKVYNDMVEAGSAN-----VVTYGNMINLYSKFQMVEDAENLLAEMRESGVKP 454
Query: 404 RFKQFQTLVQAYINA 418
+ + V+ Y N+
Sbjct: 455 DEYIYGSFVKLYCNS 469
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/342 (18%), Positives = 149/342 (43%), Gaps = 22/342 (6%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLL 151
E++Y T++ +++E ++ MK +G + F ++ ++ + + A+ L
Sbjct: 247 ELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLA 306
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M++ + Y +I++ G++ +++ + M + G+ + +AK G
Sbjct: 307 EMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAG 366
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPWLDVCMA- 269
R +A + M L R T LL + +G +Q +++ + E+ V
Sbjct: 367 RHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSANVVTYGN 426
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I + K VE+AE + M ++ K Y + +K+Y + M+ K +V++M + G
Sbjct: 427 MINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDG 486
Query: 330 ----CH---IGPLA-----------WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
C+ + PL + L+ E GE+ +A+ +L K + + +
Sbjct: 487 LESVCNEREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCI-VDT 545
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ +L+++ Y +RG + +F+ +++ + + T+++
Sbjct: 546 AAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIK 587
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 94/239 (39%), Gaps = 4/239 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
V Y T L + N+K A EV+ M++ ++ L+ L+ +L D + +
Sbjct: 650 VAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEV 709
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ V + +Y +I G + + + M+++G +P+ L + G
Sbjct: 710 LNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGL 769
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM---A 269
+A +L +M T LL+ Y GK + L + C
Sbjct: 770 FAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNE 829
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I A+G + K+ +A +F + L + L+K++ DH +G + K +++S
Sbjct: 830 VIRAYGNVGKLSDACRIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKDLSQS 888
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 126/348 (36%), Gaps = 80/348 (22%)
Query: 74 RGLQKAESYIQ----KIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSF 129
RG ++A + + +IP S + Y TLL + AEE + M D G
Sbjct: 85 RGWRQAREFFEWMKLQIPYS-PSVIAYTTLLGIYGQAGKLTLAEETLSEMLDAGVEPDEV 143
Query: 130 ACNQLLILYKRLDKKKVADVLL----LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
A +L Y R ++ D LL M + + + Y+ +I ++ + +
Sbjct: 144 AGGCMLEAYARWERY---DTLLEFYEAMRQRGLVPSAHVYRTMIVTLYKAERHSDALMLW 200
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
E + E +EP+ AI+ GR E A K+M H LP
Sbjct: 201 EDLLVEKLEPNFVLYAIIIHILNKEGRTEDAVHTFKDMRAAG---H-------LP----- 245
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
D++ +C A GKL + +E+EA++ M K S YT +
Sbjct: 246 ---DELLYNTIIC--------------ALGKLGRYQESEALYLDMKKQGIVPSKFTYTIM 288
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ V++ + + + +M SGC AD ++
Sbjct: 289 INVWSKAGRFASAAETLAEMQRSGC---------------------IADEVV-------- 319
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
Y I++ Y K G EKIF M +G ++ K + ++ +
Sbjct: 320 -------YCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKSYTSMAK 360
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 74/389 (19%), Positives = 155/389 (39%), Gaps = 35/389 (8%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + ++L +K + ++ AE+ + ++ ES E +Y + + + + KA V MK
Sbjct: 424 YGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMK 483
Query: 121 DKGF------------------PVTSFACNQLLILYKRLDKKKVADVLLLMEK---ENVK 159
D G P+ + NQLLI KR + ++ + LL++K
Sbjct: 484 DDGLESVCNEREMFPLGQALQSPIDTQILNQLLI--KRAEAGELREAELLLDKLVEAGGC 541
Query: 160 LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAM 219
+ + ++I++ G+ + +++ + P + K E+A +
Sbjct: 542 IVDTAAVLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFV 601
Query: 220 LKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCM------AAIEA 273
ME + T +L+ Y + G+ A + K + + V M +++A
Sbjct: 602 FDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKK---VGVAMDTVAYNTSLKA 658
Query: 274 WGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIG 333
K ++ A V+ M + + S K YT L+ +++ L + + + S
Sbjct: 659 NLKSGNLKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGAD 718
Query: 334 PLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIF 393
+A+ ++ + G ++A + L + + FKP Y ++D +A+ G +
Sbjct: 719 EIAYSQMIHCYGCAGRPKEA-ADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLL 777
Query: 394 HRMRQVGYVARFKQFQTLVQAYINAKTPA 422
MR+ G + L+ AY + PA
Sbjct: 778 SDMRRKGCPPSSVTYLLLMSAYGSKGKPA 806
>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 426
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 126/288 (43%), Gaps = 7/288 (2%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 35 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 94
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 95 FREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNI 154
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L + M
Sbjct: 155 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKN 214
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E KA++ L++ Q +P +Y I+ + K G +
Sbjct: 215 IDQNVVTYNSMMMIYGKTLEHVKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 273
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR---DRMRADNV 434
+F ++R G +QT++ AY A A+ R + R DN+
Sbjct: 274 AMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNI 321
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 33/231 (14%)
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL--- 50
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
IE KL +A ++F R+ ++ Y A++ V
Sbjct: 51 ----------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINV 88
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 FGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLD 148
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 198
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 81/437 (18%), Positives = 174/437 (39%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 6 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 63 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLT 122
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 182
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + I+ + T + Y KA ++
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNLI 242
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 276
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + + Y ++ Y +++ K L+ ++ + D
Sbjct: 277 ------FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRP----DNIPRDIA 326
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFK--PMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K +F + + +Y K G++ ++F +MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNV---VEVFDKMRG 383
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 384 LGYFPDSNVIALILNAY 400
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/260 (18%), Positives = 118/260 (45%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + A L LM+++N+ +Y +
Sbjct: 166 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSM 225
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 226 MMIYGKTLEHVKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCE--SNPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + ++ Y G R+ + N D+ + + G ++EEA V
Sbjct: 286 DIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAG---RIEEATWV 342
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K ++ +M G ++ L +A K
Sbjct: 343 FRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGK 402
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 403 LH----EFDKANDVYMEMQE 418
>gi|224086334|ref|XP_002307852.1| predicted protein [Populus trichocarpa]
gi|222853828|gb|EEE91375.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 3/215 (1%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLLME 154
+Y L+ C V + +FN M +GF + N +L +Y + A L +M
Sbjct: 432 LYNCLINCCARALPVGELSRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNKARELFMMA 491
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
++ + SY +I G+ D M + M+ +G + Y G+ E
Sbjct: 492 RKRGLVDVISYNTIIAAYGRKRDFKNMASTIHTMQFDGFSVSLEAYNCVLDAYGKEGQME 551
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLDVCMAAI 271
++L+ M+ + +T +++ +Y ELG D+VA + + C P L I
Sbjct: 552 SFRSVLQRMKNSSCTADHYTYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLI 611
Query: 272 EAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+A+G VE+A + K M + + YT L+
Sbjct: 612 KAYGIAGMVEDAVGLVKEMRQNGVEPDKITYTNLI 646
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 20/259 (7%)
Query: 168 LIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD- 226
+IDI +++ +KS GI D +I+ + YV G + A ++L+ ME +
Sbjct: 330 MIDIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEKEK 389
Query: 227 NLKEHRWTCRLLLPLYAELGKADQV----------ARIWKLCESNPWLDVCMAAIEAWGK 276
++ + R +L +Y + G D++ +W N ++ C A+
Sbjct: 390 DMVPDIYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCARAL----- 444
Query: 277 LNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA 336
V E +F M + +T + +L VYA K+ +K ++L MA + ++
Sbjct: 445 --PVGELSRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNKARELF-MMARKRGLVDVIS 501
Query: 337 WDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
++ ++ + + + S + Q + F +Y ++D Y K G + S + RM
Sbjct: 502 YNTIIAAYGRKRDFKNMASTI-HTMQFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRM 560
Query: 397 RQVGYVARFKQFQTLVQAY 415
+ A + ++ Y
Sbjct: 561 KNSSCTADHYTYNIMMNIY 579
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 140/320 (43%), Gaps = 18/320 (5%)
Query: 111 KAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILI 169
KAEEV M+D + LL Y + K + A+ LL+ M++ T +Y ILI
Sbjct: 63 KAEEVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNILI 122
Query: 170 DIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLK 229
G+++++ ++ +++ G+EPD +T + + + G ++AE KE++ K
Sbjct: 123 TGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLGFK 182
Query: 230 EHRWTCRLLLPLYAELGKADQVAR----IWKL-CESNPWLDVCMAAIEAWGKLNKVEEAE 284
+ L+ L AE G + R + K+ C+ + L + A E G+++K+
Sbjct: 183 PNSPNLYTLINLQAEHGDEEGACRTLDDMLKIGCQYSSILGTLLKAYEKVGRIDKIP--- 239
Query: 285 AVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLH 344
F ++ ++ + + V A K L + +K + + + P+ D L L
Sbjct: 240 --FLLKGSFYQHVTVNQNSCSILVIAYVKNLLV-DEAIKLLGDKKWN-DPVFEDNLYHLL 295
Query: 345 V----EGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
+ E G ++ A I + + +P ++D Y G + EK++ +++ G
Sbjct: 296 ICSCKELGHLDSAVKIYSLMPKSDD-RPNLHISCTMIDIYTTMGQFNEGEKLYMKLKSSG 354
Query: 401 YVARFKQFQTLVQAYINAKT 420
F +++ Y+ A +
Sbjct: 355 IGLDVIAFSIVIRMYVKAGS 374
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 133/330 (40%), Gaps = 5/330 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKR-LDKKKVADVLLL 152
V Y L+ A E+ + M+ + N+L++ + R + K +L
Sbjct: 380 VTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHK 439
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M + ++ +Y ILI + + DL +++ M G+ PD T ++ G
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGL 499
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK-ADQVARIWKLCESN--PWLDVCMA 269
E+A ++ + ++ +K + L+ Y ++GK +D + K+ + P +
Sbjct: 500 VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ + K +EA + M K + + YT L+ + D+ QM +G
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
H + A + + G ++ A+ ++ K + P Y L +D Y + G I
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG-IMPDTMLYTLFIDAYGRFGSIDGA 678
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
I RM +VG + + L++ NAK
Sbjct: 679 FGILKRMHEVGCEPSYYTYSCLIKHLSNAK 708
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 5/201 (2%)
Query: 60 ERDYASCLDLIAKLRGL-QKAESYIQKIPESF--RGEVVYRTLLANCVAGNNVKKAEEVF 116
E Y+ +D + K RGL ++A S + + E EV+Y TL+ V +
Sbjct: 484 EWTYSVFIDTLCK-RGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLL 542
Query: 117 NRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQS 175
++M G S N L+ Y + K A +L+ +M K +++ +Y ILID +
Sbjct: 543 DKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKD 602
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
++ + + M S G PD Y S GR + AE ++ +M +
Sbjct: 603 DEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLY 662
Query: 236 RLLLPLYAELGKADQVARIWK 256
L + Y G D I K
Sbjct: 663 TLFIDAYGRFGSIDGAFGILK 683
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 112/277 (40%), Gaps = 5/277 (1%)
Query: 124 FPVTSFACNQLLILYKR-LDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMD 182
F +T N LL+L R L ++ V L M + V F+ +++ + ++ +
Sbjct: 165 FKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAE 224
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
V + G+ D+ T L Y + A A+ M + + L+ +
Sbjct: 225 LYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGF 284
Query: 243 AELGKADQVARIW-KLCESNPWLDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLST 299
E + D+ +++ ++ E N W V I A +L + EA +FK M++ + +
Sbjct: 285 CEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNV 344
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLK 359
YT L+ + K ++ M E G + ++AL+ + + G A I L
Sbjct: 345 HTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEI-LS 403
Query: 360 AQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRM 396
+ N P +Y ++ + + +IH + H+M
Sbjct: 404 LMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM 440
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-M 153
Y L+ N + + +A ++F++M G F + Y + K A+VL+ M
Sbjct: 591 TYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKM 650
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+ + Y + ID G+ + G +++ M G EP T + L KH + K
Sbjct: 651 NAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPK 710
Query: 214 E 214
E
Sbjct: 711 E 711
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 126/296 (42%), Gaps = 23/296 (7%)
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL--LMEK 155
++LA C ++++ +EV + +G +F L+ +Y + + K A + + E+
Sbjct: 282 SVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTER 341
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ ++ +LI N L + +++ MK +G EP+ T + +V G E
Sbjct: 342 DTA-----TWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNEL 396
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAEL-----GKADQVARIWKLCESNPWLDVCMAA 270
A + EM+ +L+ +T ++LP A L GK I + E LDV + A
Sbjct: 397 ALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYE----LDVHIGA 452
Query: 271 --IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
++ + K ++ A V+ R+S L ++ A+L YA H +G L + M +
Sbjct: 453 ALVDMYAKCGSIKHAMQVYNRISN--PNLVSQ--NAMLTAYAMHGHGDEGIALFRNMLGN 508
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
G + + +++ V G VE N P Y I+D ++ G
Sbjct: 509 GFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYN-VTPSLKHYTCIVDLLSRAG 563
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 131/334 (39%), Gaps = 25/334 (7%)
Query: 67 LDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPV 126
+++ +K L+ A+ + E R + L++ N ++ + + +MK GF
Sbjct: 319 VEMYSKCEDLKAAQLAFDGVTE--RDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEP 376
Query: 127 TSFACNQLLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVV 185
+ N ++ + ++A L M+ +++ ++ I++ + + QV
Sbjct: 377 NVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVH 436
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+G E D A L Y G + A + + NL +L YA
Sbjct: 437 AHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQ----NAMLTAYAMH 492
Query: 246 GKADQVARIWKLCESN-------PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
G D+ +++ N +L V + + A VE F M+ S
Sbjct: 493 GHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHA----GAVETGHEFFDLMTYYNVTPS 548
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
KHYT ++ + + L + +LVK++ + W AL+ V G VE + +
Sbjct: 549 LKHYTCIVDLLSRAGRLDEAYELVKKIPRKP---DSVMWGALLGGCVIWGNVELGE---I 602
Query: 359 KAQQQNKFKPMFS-SYMLIMDQYAKRGDIHSTEK 391
A+ + +P + +Y+L+ + YA G H ++
Sbjct: 603 AAESLIELEPNNTGNYVLLANLYAYAGRWHDLDR 636
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 159/384 (41%), Gaps = 20/384 (5%)
Query: 65 SCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGF 124
SC + + L + + Q+ P+ G Y TLL N + ++++ +G
Sbjct: 167 SCSNKAEMTQALNYLDMFSQRGPK--MGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGL 224
Query: 125 PVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQ 183
N ++ L K + + ++ + K +K F+Y +I ++ DL +
Sbjct: 225 QPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFE 284
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEM--EGDNLKEHRWTCRLLLPL 241
+ M EG EP+++T + L + GR +A + EM G H +T ++
Sbjct: 285 IFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIV--A 342
Query: 242 YAELGKADQVARIW-----KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
++G+ + +I+ K C+ N + + + + ++ A +F RMS+
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM-----AIGLFHRMSRDGVV 397
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+T Y AL+ V ++ + + M + GC +++ L++ + G+ EKA S
Sbjct: 398 PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMS- 456
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY- 415
+L + + P +Y +I+ Y GD ++ M+ G + L+ +
Sbjct: 457 MLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFC 516
Query: 416 -INAKTPAYGIRDRMRADNVFPNK 438
I+ A G+ + M + PN+
Sbjct: 517 KISKMELASGMFNEMMDRGLCPNE 540
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 127/328 (38%), Gaps = 5/328 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
V Y L+ + + A VFN M G + + N+L+ Y + D +K +L
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M K T +Y I+I S D +V+E MK+ G +PD + L + +
Sbjct: 461 MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISK 520
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI---WKLCESNPWLDVCMA 269
E A M EM L + T L+ Y + K D AR+ K P +
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I K N AE + K M + Y+ ++ ++ + ++ +M + G
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
C + +L++ + G VE+A+ + + ++Q P +Y+ +++ G +
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG-LIPDEVTYVKMIEVCVMSGKVDRA 699
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYIN 417
M G + + L++ N
Sbjct: 700 FDFLGEMINAGCQPTLQTYDVLIKGLQN 727
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 157/384 (40%), Gaps = 14/384 (3%)
Query: 40 YGKALQLSEWLETNKKLDFIERD---YASCLDLIAKLRGLQKAESYIQKIPE-SFRGE-V 94
YG L LS+ +E + IERD + ++ ++L+ + A S + KI + F + V
Sbjct: 100 YGTVLSLSKRIELLR----IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAV 155
Query: 95 VYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-M 153
+ +L+ + +A E F+ M G+ N ++ + ++ K VA LL M
Sbjct: 156 TFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKM 215
Query: 154 EKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRK 213
+K + Y +ID + ++ + +K +G+ PD T +IL + +K
Sbjct: 216 DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQK 275
Query: 214 EKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC---ESNPWLDVCMAA 270
E+A A+ EM N+ T +L+ + G + I K+ P +
Sbjct: 276 EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSL 335
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
+ + NKV EA VF M + Y L+ Y + + + ++L +M+ G
Sbjct: 336 MNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL 395
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
++ L+ + G +A L K Q P + +++D K G + +
Sbjct: 396 IPNTFNYNTLISGLCQAGRHCEARE-LFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNAL 454
Query: 391 KIFHRMRQVGYVARFKQFQTLVQA 414
++F M+ + L++A
Sbjct: 455 RLFRAMQDSCLKPNLVTYDILIRA 478
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 140/343 (40%), Gaps = 44/343 (12%)
Query: 135 LILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIE 194
L+ +++ D+ VL+ M + +F + LID + ++ +V + M +G++
Sbjct: 321 LVKFEKFDEAN--SVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLK 378
Query: 195 PDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI 254
P++ T L + + + E+AE +L+ + + L + C +L L + K D +I
Sbjct: 379 PNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKI 438
Query: 255 WK-LCESNPWLDVCMAAIEAWGKLNKVEEAEAV---FKRMSKTWKKLSTKHYTALLKVYA 310
K L N ++ + + G + EA+ F+ K +T ALL
Sbjct: 439 VKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLC 498
Query: 311 DHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMF 370
+ + + + K+M E G + ++++ L+ + G++E+A + K +Q FKP
Sbjct: 499 ERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQG-FKPDT 557
Query: 371 SSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK----------- 419
+Y +M A +G + ++ H + G V + +++ Y NA
Sbjct: 558 YTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNK 617
Query: 420 --------------------------TPAYGIRDRMRADNVFP 436
T A+ +RD MR+ N+ P
Sbjct: 618 LVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHP 660
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 131/317 (41%), Gaps = 5/317 (1%)
Query: 103 CVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLLLMEKENVKLT 161
C G +++ + F KG + N LL L +R + ++V V M + + L
Sbjct: 462 CKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLD 521
Query: 162 QFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLK 221
SY LI +S + ++ E M +G +PD+ T L K G+ + +L
Sbjct: 522 GISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLH 581
Query: 222 EMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLD--VCMAAIEAWGKLN 278
E + + + +T L+L Y + D ++ KL + L V I A K
Sbjct: 582 EAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAG 641
Query: 279 KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWD 338
EA + M + + Y++++ + ++ + K + ++M G +
Sbjct: 642 NFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYT 701
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
AL+ + + G++++ +SI L+ N +P +Y +++D Y K G+ K+ + M
Sbjct: 702 ALIGGYCKLGQMDQIESI-LQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIA 760
Query: 399 VGYVARFKQFQTLVQAY 415
G + L + Y
Sbjct: 761 NGISPDTVTYTVLQKGY 777
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 39/256 (15%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL--------------ILYK 139
+ Y TL+ C +++A ++ +M +GF ++ N L+ +L++
Sbjct: 523 ISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHE 582
Query: 140 RLDKKKVADVL---LLMEK-------------------ENVKLTQFSYKILIDIKGQSND 177
D V ++ L++E V+L+ Y ILI ++ +
Sbjct: 583 AKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGN 642
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
T ++ +AM+S I P T + + E+A+ + +EM + L + +
Sbjct: 643 FTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTA 702
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTW 294
L+ Y +LG+ DQ+ I + SN P I+ + K+ +EA + M
Sbjct: 703 LIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANG 762
Query: 295 KKLSTKHYTALLKVYA 310
T YT L K Y
Sbjct: 763 ISPDTVTYTVLQKGYC 778
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/376 (18%), Positives = 142/376 (37%), Gaps = 38/376 (10%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKI-PESFRGEVVYRTLLA 101
AL W E K + +Y + ++ + K++ + + + + + + + +
Sbjct: 128 ALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQETFALISR 187
Query: 102 NCVAGNNVKKAEEVFNRMKDKGF-PVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKL 160
VK+A E F +M+ G PV S L L K ++ +V M+ +
Sbjct: 188 RYARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRP 247
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY IL++ GQ +L +D+V MK EG EPD+ T IL + R + A +
Sbjct: 248 DIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELF 307
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+ME + C P + + I G ++
Sbjct: 308 HKMEANK------------------------------CMPTPHIYCTL--INGLGSERRL 335
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP--LAWD 338
EA F+R + Y A++ Y + +V +M + C +GP +D
Sbjct: 336 TEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRK--CGVGPQTRTYD 393
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ ++ ++A + + +P S+Y +++ + + +++ M+
Sbjct: 394 IILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKA 453
Query: 399 VGYVARFKQFQTLVQA 414
G + F TL+ +
Sbjct: 454 KGVLPGMHMFSTLINS 469
>gi|302820146|ref|XP_002991741.1| hypothetical protein SELMODRAFT_448545 [Selaginella moellendorffii]
gi|300140422|gb|EFJ07145.1| hypothetical protein SELMODRAFT_448545 [Selaginella moellendorffii]
Length = 495
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 179/436 (41%), Gaps = 69/436 (15%)
Query: 37 RRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVY 96
R+ + + ++ W+ +K L + Y + K LQ + +P + VY
Sbjct: 106 RQRHDQVYKIMRWVLVDKPLPVSSKIYELSMKAAQKANKLQVVKRIFDDMPAEAKTPAVY 165
Query: 97 RTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEK 155
+++ N KAE + P T+ A NQL+++Y R+++ +K D M K
Sbjct: 166 TRIMSAYCNKNRANKAEFILESFT----PTTAQAHNQLMLMYIRMEEDEKAVDAYNRMRK 221
Query: 156 ENVK--------LTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHY 207
+K L ++S ++ I+I + + T +D + ++ ++ +++T A+LA
Sbjct: 222 AGIKPSDLTFWTLAKYSRRLGIEIDKKEAE-TILDDTLSSLDTKKDGLNAATNAMLA--- 277
Query: 208 VSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV- 266
YA +G V + W L ES+ +
Sbjct: 278 ----------------------------------YAYMGDFSGVKKAWALIESHDHIPTY 303
Query: 267 -CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLS-TKHYTALLKVYADHKMLSKGKDLVKQ 324
A +EA+G++ K+E +R+ ++WKK Y +L++ Y + + + LV
Sbjct: 304 AFAAGVEAFGQVGKMETVYHFTERV-ESWKKPDLMTFYPSLVRAYVTNGRMDRAVGLVNH 362
Query: 325 M----AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ--NKFKPMFSSYMLIMD 378
+ E G +D L+ H+ E + A +A Q + +P + + ++
Sbjct: 363 LKNKEGERKVSFG--CYDELIAGHIALKERDLAMEKTKEALQVCCPRTRPSYLTLKKMLP 420
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYV-ARFKQFQTLVQAYINAKTPA-YGIRDRMRADNVFP 436
Y K D+ + E +F R + G+ AR F L++ YI A+ PA RM V
Sbjct: 421 VYKKAKDVEAAEALFARYK--GWRDARV--FNQLLEVYIAAERPAPLQFEFRMMKSKVAD 476
Query: 437 NKALAAQVAQVDAFRK 452
N+ A +A+ F K
Sbjct: 477 NEETTALLAKSREFAK 492
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 139/333 (41%), Gaps = 13/333 (3%)
Query: 92 GEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVL 150
G LL V KA++VF + G T+ N L+ Y ++ D + +
Sbjct: 333 GAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIF 392
Query: 151 LLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
M+ +++ +Y LI+ + +T + +V M+ G++P T L Y +
Sbjct: 393 EQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTA 452
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-----WKLCESNPWLD 265
G+ EK +L +M+ +K + ++ + + GK + I +K + P
Sbjct: 453 GQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK--DVAPNAQ 510
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
V + I+A+ + E+A + ++M + S Y LLK + + ++L+ +
Sbjct: 511 VYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 570
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKF--KPMFSSYMLIMDQYAKR 383
G ++++ ++ G+ +KA +L Q+ NK+ +P + ++ A
Sbjct: 571 RNQGLRPDVVSYNTIISACCNKGDTDKALELL---QEMNKYGIRPTLRTCHTLVSALASA 627
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
G +H E ++ +M + +V AY+
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 132/337 (39%), Gaps = 9/337 (2%)
Query: 86 IPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKK 144
+P+ F Y L + +F KG + ++ C+ LL L K
Sbjct: 296 LPDGF----TYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVA 351
Query: 145 KVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILA 204
K V ++ + T Y LI+ Q DL G + E MKS I PD T L
Sbjct: 352 KAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411
Query: 205 KHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESNPW 263
KAE ++ EME + T L+ Y G+ ++ + + +
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471
Query: 264 LDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
DV + ++A+ K K+ EA A+ M + + Y +++ Y + + L
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLL 531
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYA 381
V++M SG + ++ L+K ++++A+ ++ + Q +P SY I+
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG-LRPDVVSYNTIISACC 590
Query: 382 KRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+GD ++ M + G + TLV A +A
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASA 627
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 144/353 (40%), Gaps = 11/353 (3%)
Query: 70 IAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSF 129
+A LR + ++E P++F Y ++A A +VF+ M D G
Sbjct: 177 LAMLRRMGRSEG--APPPDAFS----YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRI 230
Query: 130 ACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM 188
N ++ + K D + + M + K +Y +L+ ++ + +++ M
Sbjct: 231 TYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEM 290
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
S + PD T +IL G + ++ E + +TC +LL + GK
Sbjct: 291 ASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKV 350
Query: 249 DQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
+ +++++ P + I + ++ + A +F++M + Y AL
Sbjct: 351 AKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ +M++K +DLV +M +SG ++ L+ + G++EK ++L QQ+
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG- 469
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
K S+ ++ + K G I I M + + +++ AYI +
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES 522
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 115/279 (41%), Gaps = 18/279 (6%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVV--YRTLLANCVAGNNVKKAEEVFNRMK 120
Y + ++ + KL + KAE + ++ +S V + TL+ ++K V + M+
Sbjct: 407 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 466
Query: 121 DKGF--PVTSFACNQLLILYKRLDKKKVADVLLLMEK---ENVKLTQFSYKILIDIKGQS 175
KG V SF ++ K+ + + +++ ++V Y +ID +S
Sbjct: 467 QKGIKSDVISFGS----VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIES 522
Query: 176 NDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTC 235
D +VE MK+ G+ T +L K + ++AE ++ + L+ +
Sbjct: 523 GDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSY 582
Query: 236 RLLLPLYAELGKADQVARIWKLCESN-----PWLDVCMAAIEAWGKLNKVEEAEAVFKRM 290
++ G D+ + + E N P L C + A +V + E ++++M
Sbjct: 583 NTIISACCNKGDTDKALELLQ--EMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQM 640
Query: 291 SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
+ S+ Y ++ Y + SK L K+M+E G
Sbjct: 641 LHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 131/332 (39%), Gaps = 25/332 (7%)
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILY---KRLDKKKVADVLLLME 154
+LL+N V KA V+ +M G F+ ++ Y R+D+ + + ME
Sbjct: 226 SLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDE--AFNFVKEME 283
Query: 155 KENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+ + +Y LID D+ G +V+ M +GI +S T +L K Y G+ E
Sbjct: 284 RSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQME 343
Query: 215 KAEAMLKEMEGDNL--KEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV------ 266
+AE + M NL EH + +L+ Y G+ D RI + L V
Sbjct: 344 QAEKLFGCMMEKNLFVDEHVYG--VLIHAYCTAGRVDDALRI-----RDAMLKVGLKMNT 396
Query: 267 --CMAAIEAWGKLNKVEEAEAVFKRMSKTWK-KLSTKHYTALLKVYADHKMLSKGKDLVK 323
C + I + KL V +A V M K W K + Y LL + + K L
Sbjct: 397 VICNSLINGYCKLGHVNKAAEVLVSM-KDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCD 455
Query: 324 QMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKR 383
+M G + + ++ L+K G VE A I + P +Y ++D + K
Sbjct: 456 EMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHI-WNLMHKRGVAPNEVTYCTLLDAFFKV 514
Query: 384 GDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
G I+ G+ + T++ +
Sbjct: 515 GTFDRAMMIWKDALSKGFTKSITLYNTMICGF 546
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 8/199 (4%)
Query: 237 LLLPLYAELGKADQVARIWK---LCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT 293
++L +YAE G ++ C P L C + + + + +A V+++M
Sbjct: 191 MILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIAL 250
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
YT ++ Y + + + VK+M S C + +++L+ +V G+V A
Sbjct: 251 GILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGA 310
Query: 354 DSILLKAQQQNKFKPMFS-SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLV 412
+L A K P S +Y L++ Y KRG + EK+F M + + L+
Sbjct: 311 KKVL--ALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLI 368
Query: 413 QAYINAK--TPAYGIRDRM 429
AY A A IRD M
Sbjct: 369 HAYCTAGRVDDALRIRDAM 387
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 249 DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKV 308
D V R+ K+ + P L V A I + K K +EAE +FK M + + Y+ L+
Sbjct: 352 DLVNRVKKV-GAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDS 410
Query: 309 YADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKP 368
+ L + +M +G I +++L+ H + G + A S KP
Sbjct: 411 FCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVS-FFDEMIDKGLKP 469
Query: 369 MFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIR 426
SY ++ Y +G +H +++H M G F TL+ A A T A+ +
Sbjct: 470 TVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529
Query: 427 DRMRADNVFPNKA 439
D M N+ PN+
Sbjct: 530 DEMLEQNMMPNEV 542
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 167/386 (43%), Gaps = 16/386 (4%)
Query: 63 YASCLDLIAKLRGLQKAESYI-QKIPESFRGEVV-YRTLLANCVAGNNVKKAEEVFNRMK 120
Y S ++ KL L A S+ + I + + VV Y +L++ + +A +++ M
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT 498
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLL---MEKENVKLTQFSYKILIDIKGQSND 177
KG ++ L+ R ++ + D L M ++N+ + +Y ++I+ + +
Sbjct: 499 GKGIAPNTYTFTTLISALFRANR--MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+++ M +G+ PD+ T L S GR +A+ + ++ ++ K +
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSA 616
Query: 238 LLPLYAELGKA-DQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVF---KRMSKT 293
LL Y + G+ D + ++ + +D+ A+ G + K ++ AVF K M
Sbjct: 617 LLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTI-KEQDTSAVFGLLKNMHDQ 675
Query: 294 WKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKA 353
+ YT+++ Y+ + K + M + GC + + L+ + G ++KA
Sbjct: 676 RLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKA 735
Query: 354 DSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
+ +L K + P +Y +D A+ G + ++ + M + G +A + LV+
Sbjct: 736 E-LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVR 793
Query: 414 AY--INAKTPAYGIRDRMRADNVFPN 437
+ + A + D M + +FP+
Sbjct: 794 GFCKLGRVEEATKLLDEMIDNAIFPD 819
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 141/356 (39%), Gaps = 5/356 (1%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDK 122
Y + + +L+ KA+ IQ++ S VVY L+ V +A E+ N + K
Sbjct: 231 YVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQK 290
Query: 123 GFPVTSFA-CNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G + C +L L K + + A V+ M + T+ + L++ + +
Sbjct: 291 GLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDA 350
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+V +K G P L G+ ++AE + KEM L + T +L+
Sbjct: 351 FDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDS 410
Query: 242 YAELGKADQ-VARIWKLCESNPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLS 298
+ GK D + + K+ + + V + I KL + A + F M K +
Sbjct: 411 FCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPT 470
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
YT+L+ Y + L + L +M G + L+ + A +
Sbjct: 471 VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFD 530
Query: 359 KAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ +QN P +Y ++++ + K G+ ++ ++M Q G V ++ L+ +
Sbjct: 531 EMLEQN-MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585
>gi|449460864|ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Cucumis sativus]
Length = 693
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 163/381 (42%), Gaps = 17/381 (4%)
Query: 31 MANLRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESF 90
M L + G+AL+L + +++ + + + K L +AE I+++ F
Sbjct: 193 MDGLCNQGFMGEALELFDIMQSTNGYPPTLHLFKTLFYGLCKSGWLVEAELLIREM--EF 250
Query: 91 RG----EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLD-KKK 145
R + +Y +L+ +K A + RM G +F N L+ + +L +K
Sbjct: 251 RSLYPDKTMYTSLIHGYCRDRKMKMAMQALFRMVKIGCKPDTFTLNSLIHGFVKLGLVEK 310
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
V LME ++ ++ I+I Q + ++ +M S + P +L+
Sbjct: 311 GWLVYKLMEDWGIQPDVVTFHIMIGKYCQEGKVDSALMILNSMVSSNLSPSVHCYTVLSS 370
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVAR------IWKLCE 259
GR E+ + +LK M + + L+ +Y + G Q+A + C
Sbjct: 371 ALYRNGRLEEVDGLLKGMLDNGIIPDHVLFLTLMKMYPK-GHELQLALNILETIVKNGCG 429
Query: 260 SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGK 319
+P V +A+ E N ++ E V K +S + L+ ++ ++ + +
Sbjct: 430 CDP--SVILASAEWQTSSNLEQKFEIVLKEISISDLNLAGVAFSIVISALCETENFCYAL 487
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQ 379
D + M GC +++L++ + E A S++ + + F P ++Y++I+++
Sbjct: 488 DYLHNMVSLGCKPLLFTYNSLIRRLCKERLFEDAMSLIDHMKDYSLF-PNTTTYLIIVNE 546
Query: 380 YAKRGDIHSTEKIFHRMRQVG 400
Y ++G++ + I +MRQVG
Sbjct: 547 YCRQGNVTAAYHILRKMRQVG 567
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 33/204 (16%)
Query: 183 QVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLY 242
+++ MK + P+++T I+ Y G A +L++M LK
Sbjct: 523 SLIDHMKDYSLFPNTTTYLIIVNEYCRQGNVTAAYHILRKMRQVGLK------------- 569
Query: 243 AELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
P + + + I + ++ EAE VFK M + K Y
Sbjct: 570 -------------------PSVAIYDSIIRCLSREKRICEAEVVFKMMLEAGMDPDKKFY 610
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
++K Y+ + + + +L +QM E+ + AL++ +K + L
Sbjct: 611 LTMIKGYSKNGRILEACELFEQMVENSIPPSSHIYTALIRGLGMKNMTDKG-CLYLGKMS 669
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDI 386
+N F P Y +M+ Y + G++
Sbjct: 670 RNGFLPNVVLYSTLMNHYLRVGEV 693
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 194/456 (42%), Gaps = 63/456 (13%)
Query: 4 PDISIHSTLTKYAEEGNDLSRA-EIALAMA------NLRTRRM----YGKALQLSEWLET 52
PD+ ++T+ + EG +L +A E+A M +L T + + KA ++ E +
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 53 NKKLDF--IERD---YASCLDLIAKLRGLQKAESYIQKIPESFRGE----VVYRTLLANC 103
K++ F +E D Y S + L + ++ ++ E RG+ + Y TL+
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE--RGDSPCAITYNTLIRGF 292
Query: 104 VAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQ 162
+K+A E+F M ++G + L+ + K K A LL LM +++ +
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 163 FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKE 222
+Y I+I+ + + ++VE MK PD+ T IL + G ++A +L
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 223 MEGDNLKEHRWTCRLLLPLYAELGKADQV---ARIWKLCESNPW---LDVCMAAIEAWGK 276
M LK+ +T D + A I LC+ N LD+ +E G
Sbjct: 413 M----LKDSSYT------------DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 277 ---------LNKVEEAEAVFKRMSKTWKKLS-------TKHYTALLKVYADHKMLSKGKD 320
LN +A V K M + WK++S + YTA++ + ML+ K
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAM-ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 321 LVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQY 380
L+ +M S ++ L+ + G +++A + + Q+ N F P S+ +++D
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGS 574
Query: 381 AKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
K GDI S E + M + G + L+ ++
Sbjct: 575 LKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFL 610
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 134/361 (37%), Gaps = 45/361 (12%)
Query: 98 TLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLLMEKE 156
L+A V N + A + +M + + + + LL Y ++ K A VL LM K
Sbjct: 77 NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136
Query: 157 NVKLTQFSYKILIDIKGQSNDLTGMDQV--VEAMKSEGIEPDSSTQAILAKHYVSGGRKE 214
+++ IL+ KG +L V + M+ + PD + + + + G E
Sbjct: 137 GFAFNVYNHNILL--KGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 215 KAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAW 274
KA + EM+G W L W I+A+
Sbjct: 195 KALELANEMKGSGCS-------------------------WSLV---TW----GILIDAF 222
Query: 275 GKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
K K++EA K M + YT+L++ + D L +GK L ++ E G
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+ ++ L++ + G++++A I + + +P +Y ++D G ++ +
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEI-FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 395 RMRQVGYVARFKQFQTLVQAYINAKTPAYGI-------RDRMRADNVFPNKALAAQVAQV 447
M + + ++ A + + R R DN+ N L A+
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Query: 448 D 448
D
Sbjct: 402 D 402
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 142/350 (40%), Gaps = 7/350 (2%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
V Y T++ V +A+ VF M DKG + L+ Y + K K+V +L
Sbjct: 203 VTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQE 262
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M ++ + Y +L+D ++ T + +++ +GI+P+ + IL Y + G
Sbjct: 263 MSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGS 322
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCES---NPWLDVCMA 269
+ + L M G+ + ++ YA+ D+ I+ +P + A
Sbjct: 323 LSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGA 382
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+A KL +V++A F +M +++L+ K ++L ++ + G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQG 442
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ + ++ L+ G V +A L+ + +P SY ++D + G I
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQR-LIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEA 501
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAK--TPAYGIRDRMRADNVFPN 437
K+ + +G + TL+ Y A+ AY + M + P+
Sbjct: 502 AKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPD 551
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 138/355 (38%), Gaps = 41/355 (11%)
Query: 63 YASCLDLIAKLRGLQKAE-SYIQKIPESFRGEV-VYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +D + KL + A + Q I E ++ V+ +L+ + +KAEE+F +
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVL 439
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLT 179
D+G + + N L+ R + A L+ LM + V+ SY L+D + +
Sbjct: 440 DQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRID 499
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
++++ + S G++PD T L Y R + A ++ +EM L T +L
Sbjct: 500 EAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTIL 559
Query: 240 PLYAELGKADQVARIW------------------------------------KLCESNPW 263
+ G+ + ++ LC +
Sbjct: 560 HGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQ 619
Query: 264 LDVCMA--AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDL 321
LD+ A I A K + E+A +F +S + Y + + L + +L
Sbjct: 620 LDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDEL 679
Query: 322 VKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLI 376
M E+G +ALV+ + G++ +A + L K ++N ++ MLI
Sbjct: 680 FSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLI 734
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 119/292 (40%), Gaps = 9/292 (3%)
Query: 132 NQLLILYKRLDKKKVADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKS 190
N L+ R ++AD LL M VK +Y L+D ++ L +Q++E MK+
Sbjct: 156 NTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA 215
Query: 191 EGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ 250
G PD + G+ A +L++M + + T +L + GK D
Sbjct: 216 SGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDT 275
Query: 251 VARIWKLCESNPWLDVCMAA----IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALL 306
+ + S+ + + ++ KL + +EA +V + M++ + Y++L+
Sbjct: 276 ALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLV 335
Query: 307 KVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL----LKAQQ 362
+ + + V++MA GC + + +LV G + +A+ ++
Sbjct: 336 NGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGG 395
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ P S+Y ++ K G I K F RMR G + T+V+
Sbjct: 396 GDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 8/257 (3%)
Query: 188 MKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGK 247
M G P+S T L + GR E +L+ M ++ + + LL +L +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 248 ---ADQVAR--IWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHY 302
A+++ R I + S P L + + K KVEE+ + K + + Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 303 TALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
T ++ L + +L+++M +GC + ++ L+ +E ADS LL+
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADS-LLQTMA 179
Query: 363 QNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK--T 420
+ K +Y +MD K G + E++ RM+ G + + V +
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 421 PAYGIRDRMRADNVFPN 437
A+ + ++MR + PN
Sbjct: 240 NAHQVLEQMRDSDHDPN 256
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 146/339 (43%), Gaps = 47/339 (13%)
Query: 63 YASCLDLIAKLRGLQKA-ESYIQKIPESFRGEVV-YRTLLAN-CVAGNNVKKAEEVFNRM 119
Y + +D + K++ + +A + Y + + + +VV Y L++ C+ G +K A ++FN+M
Sbjct: 215 YNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGK-MKDATDLFNKM 273
Query: 120 KDKGFPVTSFACNQLLILY---KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSN 176
+ + N L+ + +RL K+ +VL +M K+ +K F+Y L+D
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRL--KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVK 331
Query: 177 DLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCR 236
++ + + G+ P+ + +I+ + + ++A + KEM +N+ T
Sbjct: 332 EVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYN 391
Query: 237 LLLPLYAELGKAD------------------------------------QVARIWKLCES 260
L+ +LGK +A + K+ +
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE 451
Query: 261 NPWLDVCM--AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKG 318
D+C ++ K ++E+A VF+ + L YTA+++ + H + +
Sbjct: 452 GIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDES 511
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL 357
DL+ +M E+GC + ++ ++ + E +KA+ +L
Sbjct: 512 LDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLL 550
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 141/367 (38%), Gaps = 47/367 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V+Y T++ + V +A ++++ M KG N L+ + + K K A D+
Sbjct: 213 VMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNK 272
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M EN+ +++ IL+D + L V+ M +GI+PD T L Y
Sbjct: 273 MIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYC---- 328
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIE 272
L E+ KA + NP + I
Sbjct: 329 ----------------------------LVKEVNKAKHIFNTISQRGVNPNIHSYSIMIH 360
Query: 273 AWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHI 332
+ K+ KV+EA +FK M Y +L+ +S LV +M + G
Sbjct: 361 GFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPH 420
Query: 333 GPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKI 392
+ +++++ + +V+KA ++L K + + +P +Y ++D K G + +
Sbjct: 421 DKITYNSILDALCKNHQVDKAIALLTKMKDEG-IQPDICTYTTLVDGLCKNGRLEDARIV 479
Query: 393 FHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIRD-------RMRADNVFPNKALAAQVA 445
F + GY+ + ++Q + ++G+ D +M + PN A+ ++
Sbjct: 480 FEDLLVKGYILDVNIYTAMIQGFC-----SHGLFDESLDLLSKMEENGCIPN-AVTYEII 533
Query: 446 QVDAFRK 452
F K
Sbjct: 534 ICSLFDK 540
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 135/318 (42%), Gaps = 16/318 (5%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQL---LILYKR-----LDKKK 145
V+ T + VA N A ++FNRMK CN L L+ Y L K
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199
Query: 146 VADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
+DV+ K VK+ ++ ILI N L+ ++ MK PD+ + +
Sbjct: 200 FSDVI----KLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILD 255
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWL- 264
G+ +A +L +M+ + L +R T +L+ Y +LG + A++ L N L
Sbjct: 256 VLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLP 315
Query: 265 DVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLV 322
DV + G K K++EA + M Y L+ D KG +L+
Sbjct: 316 DVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELI 375
Query: 323 KQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAK 382
+M G + ++ +VK +V+ G+++ A + L K ++ F P ++ +++ Y K
Sbjct: 376 DKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESG-FSPDCVTFNTLINGYCK 434
Query: 383 RGDIHSTEKIFHRMRQVG 400
G + ++ M + G
Sbjct: 435 AGRLSEAFRMMDEMSRKG 452
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 67/361 (18%), Positives = 141/361 (39%), Gaps = 16/361 (4%)
Query: 59 IERDYASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNR 118
IE + + LI K++ F V Y T+L + +A ++
Sbjct: 224 IENKLSEAIGLIGKMKDFS-----------CFPDNVSYNTILDVLCKKGKLNEARDLLLD 272
Query: 119 MKDKGFPVTSFACNQLLILYKRLD-KKKVADVLLLMEKENVKLTQFSYKILIDIKGQSND 177
MK+ G N L+ Y +L K+ A V+ LM + NV ++Y +LI +
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
+ ++ + M++ + PD T L K ++ +MEG +K + T +
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNV 392
Query: 238 LLPLYAELGKADQVARIWKLCESNPWLDVCM---AAIEAWGKLNKVEEAEAVFKRMSKTW 294
++ Y + GK D + E + + C+ I + K ++ EA + MS+
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452
Query: 295 KKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKAD 354
K+++ +L + L L+ ++ G + +++ L+ + + G+ +A
Sbjct: 453 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAM 512
Query: 355 SILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
L ++ + P +Y ++ G + + + + G V + T++
Sbjct: 513 K-LWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILG 571
Query: 415 Y 415
Y
Sbjct: 572 Y 572
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 18/159 (11%)
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
+D++ E ++S G+ PD +T + Y G+ EKA +M + K +TC +LL
Sbjct: 547 IDKLNELLES-GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605
Query: 241 LYAELGKADQVARIWKLCESNPWLDVCMAA--------IEAWGKLNKVEEAEAVFKRMSK 292
G D+ +++ N W+ A I K ++ EEA + M +
Sbjct: 606 GLCTEGMLDKALKLF-----NTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEE 660
Query: 293 TWKKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMAESG 329
KKL YT A+L AD + + ++ + ++ E G
Sbjct: 661 --KKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQG 697
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 56/289 (19%), Positives = 106/289 (36%), Gaps = 13/289 (4%)
Query: 129 FACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAM 188
F C+ L ++ +DK ME + VK +Y +++ + + + M
Sbjct: 363 FDCSSSLKGFELIDK---------MEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM 413
Query: 189 KSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKA 248
+ G PD T L Y GR +A M+ EM LK + T +L K
Sbjct: 414 EESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKL 473
Query: 249 DQVARIWKLCESNPWL--DVCMAA-IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
D ++ + +V I + K K EA ++ M + S Y +
Sbjct: 474 DDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTM 533
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ + D + ++ ESG ++ ++ + G+VEKA K +++
Sbjct: 534 IGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS- 592
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQA 414
FKP + +++ G + K+F+ G + T++
Sbjct: 593 FKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISG 641
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 134/318 (42%), Gaps = 9/318 (2%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYK 166
++ A F+ M G + N L+ L R +K+ VL M +Y
Sbjct: 137 SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYN 196
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
L+ ++ ++ +++V+ M+ G++P+ T + GR E A + EM +
Sbjct: 197 TLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKE 256
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKLNKVEEA 283
L + L+ Y ++G + + ++ ++ DV + I K +E A
Sbjct: 257 GLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERA 316
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP--LAWDALV 341
+ + M + +++ +TAL+ + L V++M + C I P + ++AL+
Sbjct: 317 VGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQ--CRIQPSVVCYNALI 374
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G +++A L++ + KP +Y I+ Y K GD HS ++ +M + G
Sbjct: 375 NGYCMVGRMDEARE-LVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433
Query: 402 VARFKQFQTLVQAYINAK 419
+ + +L++ K
Sbjct: 434 LPDAITYSSLIRVLCEEK 451
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 128/328 (39%), Gaps = 11/328 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP--VTSF--ACNQLLILYKRLDKKKVADV 149
V Y TL+A V +AE + + M++ G + +F N + + D +KV D
Sbjct: 193 VTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDE 252
Query: 150 LLLMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M KE + SY L+ + V M +GI PD T L
Sbjct: 253 ---MVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCK 309
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQ---VARIWKLCESNPWLDV 266
G E+A +++EM L+ + T L+ + + G D R + C P +
Sbjct: 310 AGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVC 369
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMA 326
A I + + +++EA + + M K Y+ +L Y + L +QM
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML 429
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
E+G + + +L+++ E + A +L K +P +Y ++D + K G++
Sbjct: 430 ENGVLPDAITYSSLIRVLCEEKRLGDA-HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNV 488
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQA 414
+ M + G + + L+
Sbjct: 489 ERALSLHDEMVKAGVLPDVVTYSVLING 516
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 163/418 (38%), Gaps = 41/418 (9%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
PD+ ++L + +L RA + L R M + LQ++E T F ++ +
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERA-VGL------VREMRERGLQMNEITFTALIDGFCKKGF 347
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN-CVAGNNVKKAEEVFNRMKDK 122
D + +R +++ +I S V Y L+ C+ G + +A E+ M+ K
Sbjct: 348 LD--DALLAVREMRQC-----RIQPSV---VCYNALINGYCMVGR-MDEARELVREMEAK 396
Query: 123 GFPVTSFACNQLLILY-KRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTGM 181
G + +L Y K D + M + V +Y LI + + L
Sbjct: 397 GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDA 456
Query: 182 DQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPL 241
+ + M S G++PD T L + G E+A ++ EM + T +L+
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516
Query: 242 YAELGKADQVARI-WKL-----------------CESNPWLDVCMAAIEAWGKLNKVEEA 283
++ + + R+ +KL C N L +A ++ + + EA
Sbjct: 517 LSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEA 576
Query: 284 EAVFKR-MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
+ V++ + + W L Y+ L+ + + K KQM + G + +L++
Sbjct: 577 DKVYQSILDRNWN-LDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIR 635
Query: 343 LHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVG 400
E G V +AD ++ + +S LI D K G++ + + H M + G
Sbjct: 636 GLFEKGMVVEADQVIQQLLNCCSLADAEASKALI-DLNLKEGNVDAVLDVLHGMARDG 692
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 140/326 (42%), Gaps = 20/326 (6%)
Query: 66 CLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFP 125
CL++ R +QK YI VY L++ + A +F+ M++ G
Sbjct: 117 CLEV---FRWMQKQRWYIAD-------NGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCR 166
Query: 126 VTSFACNQLLI--LYKRLDKKKVADVLLLMEK----ENVKLTQFSYKILIDIKGQSNDLT 179
+ N L+ L+ R K + L +K E K +Y IL+ Q+ ++
Sbjct: 167 PDTSVYNALITAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVN 226
Query: 180 GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLL 239
+ + + + + PD T + Y G ++ E++L M+ + K T +L+
Sbjct: 227 QANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLI 286
Query: 240 PLYA---ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
Y E K +QV + + P L + I +GK E+AE VFK+M+
Sbjct: 287 DSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYA 346
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ Y +L+ +Y +S+ +++ +M S + +A+++++ G +AD +
Sbjct: 347 PNFITYESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLL 406
Query: 357 LLKAQQQNKFKPMFSSYMLIMDQYAK 382
L +A++ F P S+Y L+ Y K
Sbjct: 407 LERARKNRPF-PGSSTYKLLYKAYTK 431
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/281 (18%), Positives = 123/281 (43%), Gaps = 21/281 (7%)
Query: 166 KILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEG 225
K LI G + + GM++ +P+ T IL + + +A A+ KE+
Sbjct: 187 KALIKALGYFDKMKGMERC---------KPNIVTYNILLRAFAQAQNVNQANALFKELNE 237
Query: 226 DNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEE 282
+ +T ++ Y + G ++ + +SN P + I+++G+ + ++
Sbjct: 238 SIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDK 297
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
E VFK + ++ +K + + +++ Y ++ K +++ K+M + G + +++L+
Sbjct: 298 MEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIM 357
Query: 343 LHVEGGEVEKADSI---LLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQV 399
++ + +A I ++ ++++ K S+ +++ Y G + + R R+
Sbjct: 358 MYGFCDCISRAREIFDEMMASKKEMK----VSTLNAMLEVYCMNGLPMEADLLLERARKN 413
Query: 400 GYVARFKQFQTLVQAYINA--KTPAYGIRDRMRADNVFPNK 438
++ L +AY A K + M +D + PNK
Sbjct: 414 RPFPGSSTYKLLYKAYTKADQKELLEKLLKLMDSDGILPNK 454
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 21/184 (11%)
Query: 240 PLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKT-WKKLS 298
PL + L K +V R + C E GK +K + VF+ M K W
Sbjct: 84 PLISTLNKYVKVIRT----------EHCFRLFEELGKTDKWLQCLEVFRWMQKQRWYIAD 133
Query: 299 TKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILL 358
Y+ L+ V L +M SGC ++AL+ H+ + KA L+
Sbjct: 134 NGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKA---LI 190
Query: 359 KA-------QQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTL 411
KA + + KP +Y +++ +A+ +++ +F + + F +
Sbjct: 191 KALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGV 250
Query: 412 VQAY 415
+ AY
Sbjct: 251 MDAY 254
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 43/301 (14%)
Query: 178 LTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL 237
LT + ++M S+G+ P+ T IL + G +++A ++L++M G + T
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT 230
Query: 238 LLPLYAELGKADQVARIWKLCESN---PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSK-- 292
L+ + G+ D R+ + P L + + K K+E+A VF M +
Sbjct: 231 LVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG 290
Query: 293 -------------TWKKLSTKH--------------------YTALLKVYADHKMLSKGK 319
+ K H +T+L+ V L +
Sbjct: 291 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAV 350
Query: 320 DLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSIL-LKAQQQNKFKPMFSSYMLIMD 378
LV+QM E G + + + AL+ + G ++ D++L ++ +Q + KP Y +++
Sbjct: 351 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLD--DALLAVRGMKQCRIKPSVVCYNALIN 408
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI-NAKT-PAYGIRDRMRADNVFP 436
Y G + ++ H M G + T++ AY N T A+ + +M V P
Sbjct: 409 GYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLP 468
Query: 437 N 437
+
Sbjct: 469 D 469
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 132/318 (41%), Gaps = 9/318 (2%)
Query: 108 NVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKLTQFSYK 166
++ A F+ M G + N L+ L R +K+ +L M +Y
Sbjct: 170 SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYN 229
Query: 167 ILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGD 226
L+ ++ ++ G +++V M+ G++P+ T + G+ E A + EM +
Sbjct: 230 TLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVRE 289
Query: 227 NLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--AAIEAWGKLNKVEEA 283
L + L+ Y + G + + ++ ++ + DV + I K +E A
Sbjct: 290 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERA 349
Query: 284 EAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP--LAWDALV 341
+ ++M + +++ +TAL+ + L V+ M + C I P + ++AL+
Sbjct: 350 VTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQ--CRIKPSVVCYNALI 407
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G +++A LL + KP +Y I+ Y K D HS ++ +M + G
Sbjct: 408 NGYCMVGRMDEARE-LLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 466
Query: 402 VARFKQFQTLVQAYINAK 419
+ + +L++ K
Sbjct: 467 LPDAITYSSLIRVLCGEK 484
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 87/435 (20%), Positives = 171/435 (39%), Gaps = 75/435 (17%)
Query: 4 PDISIHSTLTKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKLDFIERDY 63
PD+ ++L + +L RA + R+M + LQ++E T F ++ +
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLV-------RQMRERGLQMNEVTFTALIDGFCKKGF 380
Query: 64 ASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN-CVAGNNVKKAEEVFNRMKDK 122
D + +RG+++ +I S V Y L+ C+ G + +A E+ + M+ K
Sbjct: 381 LD--DALLAVRGMKQC-----RIKPSV---VCYNALINGYCMVGR-MDEARELLHEMEAK 429
Query: 123 GFPV-------------------TSFACNQLL---------ILYKRL-----DKKKVADV 149
G ++F NQ + I Y L +K+++D
Sbjct: 430 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDA 489
Query: 150 LLL---MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKH 206
+L M K ++ +F+Y LID + ++ + + M G+ PD T ++L
Sbjct: 490 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549
Query: 207 YVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDV 266
R +A+ +L ++ ++ P+ A K D + + E L
Sbjct: 550 LSKSARAMEAQQLLFKLYHED------------PIPANT-KYDALMHCCRKAE----LKS 592
Query: 267 CMAAIEAWGKLNKVEEAEAVFKRM-SKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+A ++ + + EA+ V++ M + W L Y+ L+ + + K KQM
Sbjct: 593 VLALLKGFCMKGLMNEADKVYQSMLDRNW-NLDGSVYSVLIHGHCRAGNVMKALSFHKQM 651
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
+ G + +L++ E G V +AD ++ + +S LI D G+
Sbjct: 652 LQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALI-DLNLNEGN 710
Query: 386 IHSTEKIFHRMRQVG 400
+ + + H M + G
Sbjct: 711 VDAVLDVLHGMAKDG 725
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 141/347 (40%), Gaps = 57/347 (16%)
Query: 105 AGNNVKKAEEVFNRMKDKGFP---------VTSFACNQLLILYKRLDKKKVADVLLLMEK 155
AG + K+ E+F +M DKG V SF C++ L K++ + MEK
Sbjct: 321 AGRSAKEVWEIFEKMSDKGVKWSQDVFGGLVKSF-CDEGL-------KEEALVIQTEMEK 372
Query: 156 ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEK 215
+ ++ Y L+D +SN + ++ + +K++G++P ++T IL Y + +
Sbjct: 373 KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPDI 432
Query: 216 AEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWG 275
E +L+EME +LG V C+ I A+G
Sbjct: 433 VETLLREME-------------------DLGLEPNVKSF-----------TCL--ISAYG 460
Query: 276 KLNKVEEAEA-VFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP 334
+ K+ + A F RM K K S+ YTAL+ Y+ K ++M G
Sbjct: 461 RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSV 520
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+ +L+ G+ EK I K + K K +Y ++D +AK+G +
Sbjct: 521 ETYTSLLDAFRRSGDTEKLMEI-WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVS 579
Query: 395 RMRQVGYVARFKQFQTLVQAYI----NAKTPAYGIRDRMRADNVFPN 437
++G + L+ AY +AK P + M A N+ P+
Sbjct: 580 EFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQ--LLKEMAALNLKPD 624
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 123/306 (40%), Gaps = 38/306 (12%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL- 152
+VY TL+ N++++ E +F +K KG T+ N L+ Y R + + + LL
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFAEIKAKGLKPTAATYNILMDAYARRMQPDIVETLLRE 439
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGM--DQVVEAMKSEGIEPDSSTQAILAKHYVSG 210
ME ++ S+ LI G++ ++ M D + MK G++P S + L Y
Sbjct: 440 MEDLGLEPNVKSFTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHAYSVS 498
Query: 211 GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAA 270
G EKA A +EM + +K T LL + G +++ IWKL
Sbjct: 499 GWHEKAYASFEEMWMEGIKPSVETYTSLLDAFRRSGDTEKLMEIWKL------------- 545
Query: 271 IEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGC 330
M + K + Y LL +A + + +D+V + + G
Sbjct: 546 -------------------MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFGKMGL 586
Query: 331 HIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTE 390
+ ++ L+ + GG+ K LLK KP +Y ++ + + D
Sbjct: 587 QPSVMTYNMLMNAYARGGQDAKLPQ-LLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA- 644
Query: 391 KIFHRM 396
+H+M
Sbjct: 645 FFYHKM 650
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 120/302 (39%), Gaps = 27/302 (8%)
Query: 130 ACNQLLILYKRLDKKKVADVLLLM-----EKENVKLTQFSYKILIDIKGQSNDLTGMDQV 184
AC+ +L+ L ++++AD +LL+ +KE K + Y I S +V
Sbjct: 240 ACS---VLFTLLGRERMADYILLLLSNLPDKEEFKDVRL-YNAAISGLSASQRYDDAWEV 295
Query: 185 VEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRL---LLPL 241
EAM + PD+ T AI+ GR K + E D K +W+ + L+
Sbjct: 296 YEAMNKINVFPDNVTCAIMITTMRKAGRSAKEVWEIFEKMSD--KGVKWSQDVFGGLVKS 353
Query: 242 YAELGKADQVARIWKLCE-----SNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKK 296
+ + G ++ I E SN V ++A+ K N +EE E +F + K
Sbjct: 354 FCDEGLKEEALVIQTEMEKKGIRSNTI--VYNTLMDAYNKSNHIEEVEGLFAEIKAKGLK 411
Query: 297 LSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSI 356
+ Y L+ YA + L+++M + G ++ L+ + G +K +
Sbjct: 412 PTAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSFTCLISAY---GRTKKMSDM 468
Query: 357 LLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQ 413
A + K KP SY ++ Y+ G F M G + + +L+
Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSVETYTSLLD 528
Query: 414 AY 415
A+
Sbjct: 529 AF 530
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/430 (18%), Positives = 165/430 (38%), Gaps = 56/430 (13%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFR---GEVVYRTLLANCVAGNNVKKAEEVFNRM 119
Y + +D + K+ A + ++K+ E R V+Y ++ A+ +F+ M
Sbjct: 215 YGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM 274
Query: 120 KDKGFPVTSFACNQLL--------------ILYKRLDKKKVADVLLL------------- 152
++KG F N ++ +L + ++K DV+
Sbjct: 275 QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKF 334
Query: 153 ---------MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
M + +Y +ID + N L +++ M ++G PD T +IL
Sbjct: 335 FEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSIL 394
Query: 204 AKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN-- 261
Y R + +L EM L + T L+ + +LG + + + S+
Sbjct: 395 IDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGV 454
Query: 262 -PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKH-----------YTALLKVY 309
P + C ++ K+++A +FK M K+ L H Y L+
Sbjct: 455 CPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM 369
+ S+ ++L ++M G + +++++ + +++A + + F P
Sbjct: 515 INEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ-MFDSMGSKGFSPD 573
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY--INAKTPAYGIRD 427
++ +++ Y K G + ++F M + G VA ++TL+ + + A I
Sbjct: 574 VVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQ 633
Query: 428 RMRADNVFPN 437
M + V+P+
Sbjct: 634 EMISSGVYPD 643
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 58/310 (18%), Positives = 121/310 (39%), Gaps = 6/310 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLL 152
+ + TL+ V +A + +RM + G ++ + K D ++L
Sbjct: 178 IAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRK 237
Query: 153 MEK-ENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME+ +K Y +ID + T + M+ +GI P+ T + + S G
Sbjct: 238 MEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSG 297
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN---PWLDVCM 268
R +A+ +L+EM + T +L+ + GK + ++ P
Sbjct: 298 RWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYN 357
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
+ I+ + K N+++ AE +F M+ ++ L+ Y K + G L+ +M+
Sbjct: 358 SMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRR 417
Query: 329 GCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHS 388
G + + L+ + G + A LL+ + P + ++D G +
Sbjct: 418 GLVANTITYTTLIHGFCQLGNLNAALD-LLQEMISSGVCPNVVTCNTLLDGLCNNGKLKD 476
Query: 389 TEKIFHRMRQ 398
++F M++
Sbjct: 477 ALEMFKVMQK 486
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 121/277 (43%), Gaps = 4/277 (1%)
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
ME++ V Y LI++ + D + + +K G PD + +
Sbjct: 38 MEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 97
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDV--CMA 269
+A +++ EM + + + LL +Y E K + ++ ++ E LD+ C
Sbjct: 98 FREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 157
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG 329
I+ +G+L +EA+ +F M K + + Y LL+VY D ++ + L M
Sbjct: 158 MIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKN 217
Query: 330 CHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHST 389
+ +++++ ++ + E EKA++ L++ Q +P +Y I+ + K G +
Sbjct: 218 IVQNVVTYNSMMMIYGKTLEHEKANN-LIQEMQNRGIEPNSITYSTIISIWGKVGKLDRA 276
Query: 390 EKIFHRMRQVGYVARFKQFQTLVQAYINAKTPAYGIR 426
+F ++R G +QT++ AY A A+ R
Sbjct: 277 AMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKR 313
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 99/234 (42%), Gaps = 33/234 (14%)
Query: 186 EAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAEL 245
+ M+ + PD T + L H+ G + A + L++ME D + L LY+ L
Sbjct: 1 DEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGD-------LVLYSNL 53
Query: 246 GKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTAL 305
IE KL +A ++F R+ ++ Y A+
Sbjct: 54 -------------------------IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAM 88
Query: 306 LKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNK 365
+ V+ K+ + + L+ +M +G ++ L+ ++VE + +A S+ + ++
Sbjct: 89 INVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKC 148
Query: 366 FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAK 419
+ + ++I D Y + G +K+F MR++G + TL++ Y +A+
Sbjct: 149 LLDLTTCNIMI-DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 201
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 81/437 (18%), Positives = 175/437 (40%), Gaps = 66/437 (15%)
Query: 3 APDISIHSTL-TKYAEEGNDLSRAEIALAMANLRTRRMYGKALQLSEWLETNKKL-DF-- 58
+PD +STL T + +EG L A ++ + + R+ G + S +E ++KL D+
Sbjct: 9 SPDRYTYSTLITHFGKEG--LFDAALSW-LQKMEQDRVPGDLVLYSNLIELSRKLCDYSK 65
Query: 59 -------IERD--------YASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLA 101
++R Y + +++ K + ++A S I ++ + Y TLL
Sbjct: 66 AISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLT 125
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVADVLLL-MEKENVKL 160
V +A VF+ M++ + CN ++ +Y +L K AD L M K ++
Sbjct: 126 MYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 185
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY L+ + G + + M+ + I + T + Y EKA ++
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
+EM+ ++ + T ++ ++ ++GK D+ A +
Sbjct: 246 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML-------------------------- 279
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDAL 340
F+++ + ++ Y ++ Y +++ K L+ ++ + D
Sbjct: 280 ------FQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSP----DNIPRDTA 329
Query: 341 VKLHVEGGEVEKADSILLKAQQQNKFKPM--FSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+ + G +E+A + +A + K + F + + +Y K ++ ++F +MR
Sbjct: 330 IHILAGAGRIEEATYVFRQAIDAGEVKDIMVFERMIHLFSKYKKYANV---VEVFDKMRG 386
Query: 399 VGYVARFKQFQTLVQAY 415
+GY ++ AY
Sbjct: 387 LGYFPDSNVIALVLNAY 403
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/260 (18%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 110 KKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLLMEKENVKLTQFSYKIL 168
K+A+++F M+ G + N LL +Y + + + LM+++N+ +Y +
Sbjct: 169 KEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSM 228
Query: 169 IDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNL 228
+ I G++ + + +++ M++ GIEP+S T + + + G+ ++A + +++ +
Sbjct: 229 MMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 288
Query: 229 KEHRWTCRLLLPLYAELGKADQVARIWKLCES--NPWLDVCMAAIEAWGKLNKVEEAEAV 286
+ + + ++ Y G R+ +S N D + + G ++EEA V
Sbjct: 289 EIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAG---RIEEATYV 345
Query: 287 FKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESG----CHIGPLAWDALVK 342
F++ + + ++ +++ +K + ++ +M G ++ L +A K
Sbjct: 346 FRQAIDAGEVKDIMVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGK 405
Query: 343 LHVEGGEVEKADSILLKAQQ 362
LH E +KA+ + ++ Q+
Sbjct: 406 LH----EFDKANGVYMEMQE 421
>gi|357491817|ref|XP_003616196.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517531|gb|AES99154.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 981
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/377 (19%), Positives = 161/377 (42%), Gaps = 40/377 (10%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRG--EVVYRTLLANCVAGNNVKKAEEVFNRMK 120
Y + +DL K L+ A + +S + TL+ + N+ +AE + ++M+
Sbjct: 296 YNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLEAESLLDKME 355
Query: 121 DKGFPVTSFACNQLLILYKRLDK--------KKVADVLLLMEKENVKLTQFSYKILIDIK 172
++G + N L LY +++ +V L + +Y+ L+
Sbjct: 356 ERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIREVGLFPD-------TVTYRALLGAL 408
Query: 173 GQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHR 232
N + ++ V++ M+ + D+ + + + K Y++ G +KA +L++ +
Sbjct: 409 CTENMVQAVEGVIDEMEKNSVSLDALSLSGIVKMYINEGDVDKANDLLQKYG----EPPS 464
Query: 233 WTCRLLLPLYAELG-----------KADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVE 281
+ C ++ +AE G K D+ + + E N I+A+GK N +
Sbjct: 465 FICAAIIDAFAEKGFWAEAENIFYRKRDKARQARDILEFN-------VMIKAYGKANHYD 517
Query: 282 EAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALV 341
+A +F+ M + Y +++++ + ++ + +DL +M E G + A++
Sbjct: 518 KAVLLFEEMKYQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQEMGFKPHCQTFSAVI 577
Query: 342 KLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGY 401
+ G++ A I+ + KP + Y +++ +A+ G + + FH M++ G
Sbjct: 578 GCYARLGQLSDA-VIVYQEMISAGVKPNETVYGALINGFAEHGRLDEALQYFHLMQESGL 636
Query: 402 VARFKQFQTLVQAYINA 418
A TL+++Y A
Sbjct: 637 SANLVVLTTLMKSYSKA 653
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 132/334 (39%), Gaps = 8/334 (2%)
Query: 87 PESFRGEVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKV 146
P R Y TL+ +K A +VF M G + + N L+ +
Sbjct: 287 PLKPRLSTTYNTLIDLYGKAGRLKDAADVFADMMKSGVAMDTCTFNTLIFISGSHGNLLE 346
Query: 147 ADVLL-LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
A+ LL ME+ + +Y I + + + + ++ G+ PD+ T L
Sbjct: 347 AESLLDKMEERGISSNTRTYNIFLSLYATAGSIDAALSYYRRIREVGLFPDTVTYRALLG 406
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD 265
+ + E ++ EME +++ + ++ +Y G D+ + + P
Sbjct: 407 ALCTENMVQAVEGVIDEMEKNSVSLDALSLSGIVKMYINEGDVDKANDLLQKYGEPPSF- 465
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKR-MSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
+C A I+A+ + EAE +F R K + + ++K Y K L ++
Sbjct: 466 ICAAIIDAFAEKGFWAEAENIFYRKRDKARQARDILEFNVMIKAYGKANHYDKAVLLFEE 525
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRG 384
M G +++++++ V++A + ++ Q+ FKP ++ ++ YA+ G
Sbjct: 526 MKYQGISPADSTYNSIIQMLSGADLVDQARDLTVEMQEMG-FKPHCQTFSAVIGCYARLG 584
Query: 385 DIHSTEKIFHRMRQVGYVARFKQFQTLVQAYINA 418
+ ++ M G K +T+ A IN
Sbjct: 585 QLSDAVIVYQEMISAG----VKPNETVYGALING 614
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 134/375 (35%), Gaps = 68/375 (18%)
Query: 61 RDYASCLDLIAKLRGLQKAESYIQKIPES--FRGEVVYRTLLANCVAGNNVKKAEEVFNR 118
R Y L L A + A SY ++I E F V YR LL N V+ E V +
Sbjct: 364 RTYNIFLSLYATAGSIDAALSYYRRIREVGLFPDTVTYRALLGALCTENMVQAVEGVIDE 423
Query: 119 MKDKGFPVTSFACNQLLILY-KRLDKKKVADVL----------------------LLMEK 155
M+ + + + + ++ +Y D K D+L E
Sbjct: 424 MEKNSVSLDALSLSGIVKMYINEGDVDKANDLLQKYGEPPSFICAAIIDAFAEKGFWAEA 483
Query: 156 ENVKLTQ----------FSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAK 205
EN+ + + ++I G++N + E MK +GI P ST + +
Sbjct: 484 ENIFYRKRDKARQARDILEFNVMIKAYGKANHYDKAVLLFEEMKYQGISPADSTYNSIIQ 543
Query: 206 HYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLD 265
++A + EM+ K H T ++ YA LG+
Sbjct: 544 MLSGADLVDQARDLTVEMQEMGFKPHCQTFSAVIGCYARLGQ------------------ 585
Query: 266 VCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQM 325
+ +A V++ M K + Y AL+ +A+H L + M
Sbjct: 586 --------------LSDAVIVYQEMISAGVKPNETVYGALINGFAEHGRLDEALQYFHLM 631
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
ESG + L+K + + G+++ SI + Q + + +I +A+ G
Sbjct: 632 QESGLSANLVVLTTLMKSYSKAGDLKGVKSIYKQMQNMEGVLDLAARSSMIT-AFAELGL 690
Query: 386 IHSTEKIFHRMRQVG 400
+ + F + ++ G
Sbjct: 691 VSEAKLTFEKFKETG 705
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 139/341 (40%), Gaps = 12/341 (3%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDK-KKVADVLLL 152
VVY LL V GN V +A F P S + N L+ R+ K K ++
Sbjct: 203 VVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNE 262
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLT-GMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
M +Y LI+ + N++ G D + E + + PD T + Y G
Sbjct: 263 MRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLG 322
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK---LCESNPWLDVCM 268
+ EKA + M +K + +T +L+ + ++G +++ L P +
Sbjct: 323 KMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFT 382
Query: 269 AAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT--ALLKVYADHKMLSKGKDLVKQMA 326
+ I+ + KVE + ++ ++ + LS YT L L + + ++ +
Sbjct: 383 SLIDGHCRTGKVERSLKLWHELNA--RNLSPNEYTFAILTNALCKENRLHEARGFLRDLK 440
Query: 327 ESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDI 386
P ++ ++ + G V++A+ IL + +++ + KP +Y +++ + +G +
Sbjct: 441 WRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEK-RCKPDKITYTILIIGHCMKGRL 499
Query: 387 HSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKTP--AYGI 425
IF+RM G +L+ + A P AY I
Sbjct: 500 SEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRI 540
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 112/278 (40%), Gaps = 13/278 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRM---KDKGFPVTSFACNQLLILYKRLDKKKVADVL 150
+ Y TL+ N V + ++ + D V ++ ++ Y +L K + A +L
Sbjct: 273 ITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYT--SIISGYCKLGKMEKASIL 330
Query: 151 LL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVS 209
M +K F++ ILI+ G+ D+ + + E M G PD T L +
Sbjct: 331 FNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCR 390
Query: 210 GGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARI-----WKLCESNPWL 264
G+ E++ + E+ NL + +T +L + + + W+ + P++
Sbjct: 391 TGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFM 450
Query: 265 DVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQ 324
I+ + K V+EA + M + K YT L+ + LS+ + +
Sbjct: 451 Y--NPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNR 508
Query: 325 MAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQ 362
M +GC + +L+ ++ G +A I+ A +
Sbjct: 509 MLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASE 546
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 109/263 (41%), Gaps = 16/263 (6%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
V + M +G PD+S L G+ A + +E + ++ LL
Sbjct: 159 VYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVDGVEFSLVVYNK-----LLNQLV 213
Query: 244 ELGKADQVARIWK--LCESNPWLDVCMAAIEAWG--KLNKVEEAEAVFKRMSKTWKKLST 299
+ D+ ++ + P+ D C I G ++ KV++A +F M
Sbjct: 214 RGNQVDEAVCFFREQMGLHGPF-DSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDV 272
Query: 300 KHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGP--LAWDALVKLHVEGGEVEKADSIL 357
Y L+ + + +G DL+K++ + P + + +++ + + G++EKA SIL
Sbjct: 273 ITYNTLINGFCRVNEVDRGHDLLKELLSKN-DLSPDVVTYTSIISGYCKLGKMEKA-SIL 330
Query: 358 LKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYIN 417
+ KP ++ ++++ + K GD+ S E ++ M +G F +L+ +
Sbjct: 331 FNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCR 390
Query: 418 AKTPAYGIR--DRMRADNVFPNK 438
++ + A N+ PN+
Sbjct: 391 TGKVERSLKLWHELNARNLSPNE 413
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 82/224 (36%), Gaps = 16/224 (7%)
Query: 199 TQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLC 258
T + L + G E A+A+ M D L+ + GK + +AR W
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFN-IARTW--- 194
Query: 259 ESNPWLDVCMAAIEAWGKL-------NKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYAD 311
+D ++ + KL N+V+EA F+ + + L++
Sbjct: 195 -----VDGVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCR 249
Query: 312 HKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFS 371
+ K +L +M GC + ++ L+ EV++ +L + +N P
Sbjct: 250 IGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVV 309
Query: 372 SYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
+Y I+ Y K G + +F+ M G F L+ +
Sbjct: 310 TYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGF 353
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 145/376 (38%), Gaps = 39/376 (10%)
Query: 43 ALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPE-SFRGEVVYRTLLA 101
AL W E K + Y + ++ + K++ + + + + + + +
Sbjct: 22 ALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMKQKGLLNKETFALISR 81
Query: 102 NCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLL-ILYKRLDKKKVADVLLLMEKENVKL 160
VK+A + F +M+ G + S N+LL L K ++ V M K
Sbjct: 82 RYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVA 141
Query: 161 TQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAML 220
SY IL++ GQ +L+ + +V MK EG EPD T IL + R + A +
Sbjct: 142 DIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELF 201
Query: 221 KEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKV 280
EME N C+ +P + + I G ++
Sbjct: 202 HEMEAKN------------------------------CKPSPHIYCTL--INGLGAEKRL 229
Query: 281 EEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLA--WD 338
EA F+ + Y A++ Y + + + + +M + G +GP A +D
Sbjct: 230 SEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGG--VGPSARTYD 287
Query: 339 ALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
++ + G+ + A S+ K + +P S+Y +I+ + + K++ +M+
Sbjct: 288 IILHHLIRAGKTKIAYSVFQKMSCEG-CQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKA 346
Query: 399 VGYVARFKQFQTLVQA 414
G + F TL+ +
Sbjct: 347 KGILPVMHMFSTLINS 362
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/438 (21%), Positives = 168/438 (38%), Gaps = 90/438 (20%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPES-FRGEVVYRTLLAN--CVAGNNVKKAEEVFNRM 119
Y + ++ + KL A + ++K+ ES + VV + + + C GN++K A+ +F M
Sbjct: 48 YGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIK-AQNIFTEM 106
Query: 120 KDKG-FP-VTSFAC--------------NQLL--ILYKRLDKKKVADVLLL--------- 152
+KG FP V ++ C QLL ++ + +D V L+
Sbjct: 107 HEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKV 166
Query: 153 ---------MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAIL 203
M + N+ T +Y +ID + + L + + M S+G PD T L
Sbjct: 167 SGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTL 226
Query: 204 A-------KHYVSG----GRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
+H + G G A+ + +EM + + TC LL E GK ++
Sbjct: 227 IDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKAL 286
Query: 253 RIWKLCESNPW-LDV--CMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
++K+ + + LD C I K NKV+EA +F + + Y L+ V+
Sbjct: 287 EMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVF 346
Query: 310 ADH-----------KMLSKG------------------------KDLVKQMAESGCHIGP 334
+ML KG + +V M GC
Sbjct: 347 VKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDV 406
Query: 335 LAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFH 394
+ + L+K + + G V+ + + Q+ +Y ++ + K GD++ + IF
Sbjct: 407 VTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTI-TYNALIHGFCKVGDLNGAQDIFE 465
Query: 395 RMRQVGYVARFKQFQTLV 412
M G F++++
Sbjct: 466 EMVSSGVCPDTITFRSML 483
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 4/239 (1%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRLDKKKVA-DVLLL 152
V TLLA ++KA E+F + + + CN ++ + +K A D+
Sbjct: 267 VTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNS 326
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
+ V+ +Y ILI + + + + + M +GI P + T + + R
Sbjct: 327 LPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNR 386
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIW-KLCESNPWLDVCM--A 269
E+A M+ M + T L+ Y + G+ D ++ ++C+ D A
Sbjct: 387 LEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNA 446
Query: 270 AIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAES 328
I + K+ + A+ +F+ M + T + ++L L KG +++ + +S
Sbjct: 447 LIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 62/338 (18%), Positives = 138/338 (40%), Gaps = 16/338 (4%)
Query: 94 VVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLILYKRL-DKKKVADVLLL 152
V + TL+ V +A + +RM ++G + ++ +L D ++L
Sbjct: 11 VTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRK 70
Query: 153 MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGR 212
M++ +K Y ++D + + + M +GI P+ T + Y S G+
Sbjct: 71 MDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGK 130
Query: 213 KEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK-LCESN--PWLDVCMA 269
AE +L++M N+ T L+ + + GK +++ + N P +
Sbjct: 131 WSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSS 190
Query: 270 AIEAWGKLNKVEEAEAVFKRM-----SKTWKKLST------KHYTALLKVYADHKMLSKG 318
I+ + K +++E+A+ +F M S L+T + L+ + ++
Sbjct: 191 MIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVA 250
Query: 319 KDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMD 378
+DL ++M +G + + L+ E G++EKA + K Q++K ++ +I++
Sbjct: 251 QDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALE-MFKVFQKSKMDLDTATCNIIIN 309
Query: 379 QYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAYI 416
K + +F+ + G + L+ ++
Sbjct: 310 GMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFV 347
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 151/387 (39%), Gaps = 25/387 (6%)
Query: 34 LRTRRMYGKALQLSEWLETNKKLDFIERDYASCLDLIAKLRGLQKAESYIQKIPESFRGE 93
L+T++ Y +L+ W+ T + L ++ K R + AES ++ I ES +
Sbjct: 89 LKTQKDYVLSLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSID 148
Query: 94 V---VYRTLLAN---CVAGNNV--------------KKAEEVFNRMKDKGFPVTSFACNQ 133
++ +LL + C + +V + A + F RMKD GF T +CN
Sbjct: 149 FPSKLFESLLYSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNA 208
Query: 134 LLILYKRLDKKKVADVLLL-MEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEG 192
L + +A M + + ++ ++I + L + V E M + G
Sbjct: 209 YLSSLLNFSRGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMG 268
Query: 193 IEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVA 252
P+ ++ L Y + G A + ME + + T L+ + ++GK + +
Sbjct: 269 FSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEAS 328
Query: 253 RIW---KLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYTALLKVY 309
+++ K +P I + K E +F+ MS+ K Y AL+
Sbjct: 329 KLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGL 388
Query: 310 ADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPM 369
K LV+++ E G + AL+ + E+A I K+ ++ F P
Sbjct: 389 CKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQI-YKSMIKSSFTPC 447
Query: 370 FSSYMLIMDQYAKRGDIHSTEKIFHRM 396
++ +++ + + D ++ M
Sbjct: 448 DQTFRMLLSTFCENEDYDGAVQLLEEM 474
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 147/355 (41%), Gaps = 14/355 (3%)
Query: 93 EVVYRTLLANCVAGNNVKKAEEVFNRMKDKGFPVTSFACNQLLI-LYKRLDKKKVADVLL 151
+V Y ++ ++++A E+ M+ +SF N L+ L R KKV D+ L
Sbjct: 1156 DVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQL 1214
Query: 152 LMEKENVKLTQFSYKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGG 211
ME E + T +Y +I QS + M++ G+ PD T L Y G
Sbjct: 1215 EMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAG 1274
Query: 212 RKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYAELGKADQVARIWK--LCESNPWLDVCMA 269
++A + ++ L T +L+ Y LG ++ ARI K + E +VC
Sbjct: 1275 NLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEE-ARILKEEMGEQGCLPNVCTY 1333
Query: 270 AIEAWGKLN--KVEEAEAVFKRMSKTWKKLSTKHYTALLKVYADHKM--LSKGKDLVKQM 325
I G LN + A F M K L + ++ A+ + +++ +L + +
Sbjct: 1334 TILMKGSLNVRSLAMAREFFDEMLS--KGLQPDCFAYNTRICAELILGDIARAFELREVL 1391
Query: 326 AESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQNKFKPMFSSYMLIMDQYAKRGD 385
G + ++ L+ + G ++ A + +K N +P +Y ++ + +RG
Sbjct: 1392 MLEGISSDTVTYNILIHGLCKTGNLKDAKELQMK-MVSNGLQPDCITYTCLIHAHCERGL 1450
Query: 386 IHSTEKIFHRMRQVGYVARFKQFQTLVQAYINAKT--PAYGIRDRMRADNVFPNK 438
+ KIF+ M G + F ++ AY AYG +M + V PN+
Sbjct: 1451 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE 1505
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 87/232 (37%), Gaps = 32/232 (13%)
Query: 184 VVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLPLYA 243
V E M GIEP T L ++ GRK+K +LKEME
Sbjct: 1106 VHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEME------------------- 1146
Query: 244 ELGKADQVARIWKLCESNPWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWKKLSTKHYT 303
R ++ +V + + G L EEA + + M + KK S+ Y
Sbjct: 1147 --------TRGSGCLPNDVTYNVVITGLTRKGDL---EEAAELVEGMRLS-KKASSFTYN 1194
Query: 304 ALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADSILLKAQQQ 363
L+ + K DL +M G + ++A++ ++ G VE A + +
Sbjct: 1195 PLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAA-QVKFAEMRA 1253
Query: 364 NKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVARFKQFQTLVQAY 415
P +Y +++ Y K G++ +F +R+ G + L+ Y
Sbjct: 1254 MGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGY 1305
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 134/349 (38%), Gaps = 45/349 (12%)
Query: 63 YASCLDLIAKLRGLQKAESYIQKIPESFRGEVVYRTLLAN--CVAGNNVKKAEEVFNRMK 120
++ + ++K R +A+S+ + + F +VV T L + C AGN + +AE VF MK
Sbjct: 1251 FSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGN-ISEAERVFGEMK 1309
Query: 121 DKGFPVTSFACNQLLILYKRLDKKKVADVLLLMEKENVKLTQFSYKILIDIKGQSNDLTG 180
G NV ++Y I+ID +S +T
Sbjct: 1310 MAGI------------------------------XPNV----YTYSIVIDALCRSGQITR 1335
Query: 181 MDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEMEGDNLKEHRWTCRLLLP 240
V M G +P++ T L + +V GR EK + +M+ T L+
Sbjct: 1336 AHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIE 1395
Query: 241 LYAELGKADQVARIW----KLCESN-PWLDVCMAAIEAWGKLNKVEEAEAVFKRMSKTWK 295
+ ++ +I K C N + I KL V A +F +M
Sbjct: 1396 SHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCIS---KLGDVNSAHRMFAKMKDLKC 1452
Query: 296 KLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVKLHVEGGEVEKADS 355
+ +T Y L++++AD K L K+M E+ + L+ G A S
Sbjct: 1453 RPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYS 1512
Query: 356 ILLKAQQQNKFKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQVGYVAR 404
+ ++ +P Y +++ Q K G + E++ +M G+V R
Sbjct: 1513 FFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTR 1561
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 102/239 (42%), Gaps = 9/239 (3%)
Query: 165 YKILIDIKGQSNDLTGMDQVVEAMKSEGIEPDSSTQAILAKHYVSGGRKEKAEAMLKEME 224
Y +ID+ G+ Q+++ MK+ +E T IL + YV G +A ME
Sbjct: 1181 YMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRME 1240
Query: 225 GDNLKEHRWTCRLLLPLYAELGKADQVARIWKLCESN--PWLDVCMAAIEAWGKLNKVEE 282
K + +++ ++ +A + + + P + V + + W + + E
Sbjct: 1241 DYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISE 1300
Query: 283 AEAVFKRMSKTWKKLSTKHYTALLKVYADHKMLSKGKDLVKQMAESGCHIGPLAWDALVK 342
AE VF M + Y+ ++ +++ D+ +M + GC + ++ L++
Sbjct: 1301 AERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMR 1360
Query: 343 LHVEGGEVEKADSILLKAQQQNK---FKPMFSSYMLIMDQYAKRGDIHSTEKIFHRMRQ 398
+HV+ G EK +L+ Q K P +Y +++ + + ++ KI + +++
Sbjct: 1361 VHVKAGRTEK----VLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK 1415
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,502,602,021
Number of Sequences: 23463169
Number of extensions: 254858918
Number of successful extensions: 768045
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 4172
Number of HSP's that attempted gapping in prelim test: 720423
Number of HSP's gapped (non-prelim): 27037
length of query: 460
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 314
effective length of database: 8,933,572,693
effective search space: 2805141825602
effective search space used: 2805141825602
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)