Query 012587
Match_columns 460
No_of_seqs 127 out of 1230
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 12:21:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012587.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012587hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 9.7E-66 3.3E-70 506.8 39.6 426 1-451 8-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2E-62 6.9E-67 493.0 39.1 443 4-452 6-479 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 3.5E-59 1.2E-63 467.8 44.8 434 1-452 1-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 2.2E-59 7.6E-64 466.3 38.6 427 1-451 1-451 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 5.8E-57 2E-61 450.1 37.0 421 5-451 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 5.1E-45 1.7E-49 362.0 35.2 388 3-451 9-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.1E-44 3.7E-49 357.0 23.8 355 5-450 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2.7E-42 9.1E-47 341.3 30.2 382 7-453 1-401 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 5.7E-42 1.9E-46 339.1 26.0 369 7-453 1-402 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.8E-40 6.3E-45 328.4 34.7 375 3-450 17-411 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 2E-41 7E-46 333.5 23.2 369 7-452 1-382 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 5.7E-40 1.9E-44 323.3 32.9 373 4-451 2-397 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 4.2E-40 1.4E-44 328.2 26.2 371 4-451 18-434 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 4.3E-38 1.5E-42 312.8 33.5 364 1-432 1-384 (430)
15 2p6p_A Glycosyl transferase; X 100.0 3.5E-38 1.2E-42 308.8 32.0 352 7-453 1-380 (384)
16 4fzr_A SSFS6; structural genom 100.0 2.2E-37 7.4E-42 304.6 23.0 344 4-431 13-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 9.7E-37 3.3E-41 299.9 26.8 352 4-450 18-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.6E-34 8.7E-39 282.0 27.6 350 7-450 2-386 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1.9E-32 6.6E-37 270.4 32.6 362 4-451 18-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 3.5E-29 1.2E-33 242.3 27.6 320 7-431 3-337 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.1E-26 3.9E-31 200.0 16.3 162 253-431 7-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 2.3E-20 7.9E-25 180.7 26.4 333 7-453 7-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1.7E-15 5.9E-20 139.2 20.7 260 7-395 1-273 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1E-15 3.5E-20 135.0 9.2 132 264-410 25-196 (224)
25 3dzc_A UDP-N-acetylglucosamine 99.5 8.3E-13 2.8E-17 128.7 17.0 328 3-422 22-374 (396)
26 1v4v_A UDP-N-acetylglucosamine 99.5 5.9E-12 2E-16 121.9 22.8 324 1-422 1-341 (376)
27 3okp_A GDP-mannose-dependent a 99.5 2.7E-11 9.4E-16 117.8 27.5 324 3-421 1-350 (394)
28 3ot5_A UDP-N-acetylglucosamine 99.4 3.2E-12 1.1E-16 124.7 18.4 323 4-422 25-368 (403)
29 3c48_A Predicted glycosyltrans 99.4 2.9E-10 9.8E-15 112.4 29.8 354 4-428 18-408 (438)
30 3fro_A GLGA glycogen synthase; 99.3 9.2E-10 3.1E-14 108.5 28.0 357 5-413 1-396 (439)
31 1vgv_A UDP-N-acetylglucosamine 99.3 1.6E-11 5.5E-16 119.2 15.0 327 7-421 1-348 (384)
32 2gek_A Phosphatidylinositol ma 99.3 3.9E-10 1.3E-14 110.0 24.7 316 3-421 17-355 (406)
33 3beo_A UDP-N-acetylglucosamine 99.3 7.9E-11 2.7E-15 113.8 19.5 324 4-421 6-348 (375)
34 2r60_A Glycosyl transferase, g 99.3 9.2E-09 3.1E-13 103.4 31.2 85 326-420 334-429 (499)
35 2iuy_A Avigt4, glycosyltransfe 99.2 6.6E-10 2.3E-14 105.9 19.1 125 270-412 164-307 (342)
36 2iw1_A Lipopolysaccharide core 99.2 4.6E-09 1.6E-13 101.2 23.2 140 266-426 194-348 (374)
37 2jjm_A Glycosyl transferase, g 99.1 7.4E-08 2.5E-12 93.6 29.6 319 7-420 16-355 (394)
38 4hwg_A UDP-N-acetylglucosamine 99.1 2.2E-09 7.4E-14 103.8 17.6 317 5-413 8-342 (385)
39 2x6q_A Trehalose-synthase TRET 99.0 1.2E-07 4.1E-12 92.8 26.9 84 326-421 292-385 (416)
40 1rzu_A Glycogen synthase 1; gl 98.7 4.7E-06 1.6E-10 83.2 26.0 133 269-420 292-448 (485)
41 3s28_A Sucrose synthase 1; gly 98.6 1.8E-06 6E-11 90.6 20.4 78 326-411 639-728 (816)
42 2vsy_A XCC0866; transferase, g 98.6 0.00011 3.8E-09 74.7 32.6 89 327-422 434-529 (568)
43 2qzs_A Glycogen synthase; glyc 98.6 2.3E-05 7.9E-10 78.1 26.9 136 267-421 291-450 (485)
44 2hy7_A Glucuronosyltransferase 98.4 9.3E-05 3.2E-09 72.0 25.6 75 325-413 263-352 (406)
45 3oy2_A Glycosyltransferase B73 98.4 5E-05 1.7E-09 73.9 23.5 83 329-423 256-363 (413)
46 2f9f_A First mannosyl transfer 98.4 9.6E-07 3.3E-11 75.3 9.4 138 270-426 25-174 (177)
47 2xci_A KDO-transferase, 3-deox 98.2 0.00033 1.1E-08 67.2 24.1 95 328-428 261-362 (374)
48 1psw_A ADP-heptose LPS heptosy 97.8 0.0048 1.6E-07 58.3 23.2 102 7-137 1-106 (348)
49 3tov_A Glycosyl transferase fa 97.8 0.0021 7.2E-08 60.9 20.5 106 4-137 6-115 (349)
50 3rhz_A GTF3, nucleotide sugar 97.5 0.00028 9.5E-09 66.5 9.6 111 328-450 215-337 (339)
51 3qhp_A Type 1 capsular polysac 97.5 0.00086 2.9E-08 55.8 11.8 131 268-421 2-146 (166)
52 3q3e_A HMW1C-like glycosyltran 97.5 0.0012 3.9E-08 66.4 13.4 145 267-422 440-595 (631)
53 2bfw_A GLGA glycogen synthase; 97.4 0.003 1E-07 54.2 13.8 83 328-421 96-187 (200)
54 4gyw_A UDP-N-acetylglucosamine 97.4 0.0078 2.7E-07 62.7 19.0 119 265-394 520-651 (723)
55 2x0d_A WSAF; GT4 family, trans 95.3 0.06 2.1E-06 52.0 9.2 84 327-421 295-385 (413)
56 3ty2_A 5'-nucleotidase SURE; s 95.0 0.027 9.3E-07 49.9 5.3 116 3-141 8-136 (261)
57 2phj_A 5'-nucleotidase SURE; S 94.8 0.18 6.1E-06 44.5 9.8 115 6-141 1-128 (251)
58 3vue_A GBSS-I, granule-bound s 94.3 0.096 3.3E-06 52.5 8.1 130 268-412 327-476 (536)
59 2wqk_A 5'-nucleotidase SURE; S 93.6 0.41 1.4E-05 42.4 9.8 115 6-141 1-128 (251)
60 1j9j_A Stationary phase surviV 90.2 1.1 3.8E-05 39.4 8.4 115 7-140 1-128 (247)
61 2e6c_A 5'-nucleotidase SURE; S 89.8 2.6 8.8E-05 37.0 10.4 115 7-141 1-130 (244)
62 3rfo_A Methionyl-tRNA formyltr 89.0 3.4 0.00012 37.9 11.1 37 3-44 1-37 (317)
63 3vue_A GBSS-I, granule-bound s 88.8 0.21 7.2E-06 50.0 3.1 37 4-42 7-51 (536)
64 1l5x_A SurviVal protein E; str 88.7 3 0.0001 37.4 10.2 114 7-141 1-128 (280)
65 3qxc_A Dethiobiotin synthetase 88.1 3.5 0.00012 36.2 10.2 38 4-41 18-57 (242)
66 2x0d_A WSAF; GT4 family, trans 87.9 0.27 9.1E-06 47.4 3.1 40 4-43 44-88 (413)
67 2ywr_A Phosphoribosylglycinami 87.6 2.3 7.9E-05 36.7 8.5 105 6-141 1-111 (216)
68 3auf_A Glycinamide ribonucleot 86.9 3.5 0.00012 35.8 9.4 107 4-141 20-132 (229)
69 4dim_A Phosphoribosylglycinami 86.9 2.9 0.0001 39.7 9.9 36 3-43 4-39 (403)
70 3zqu_A Probable aromatic acid 85.8 1.2 4E-05 38.2 5.6 45 6-51 4-48 (209)
71 2bw0_A 10-FTHFDH, 10-formyltet 85.4 4.7 0.00016 37.2 9.9 100 7-141 23-130 (329)
72 1ccw_A Protein (glutamate muta 85.0 1.4 4.7E-05 35.0 5.4 47 6-52 3-49 (137)
73 2v4n_A Multifunctional protein 84.9 2.7 9.4E-05 37.1 7.7 112 7-141 2-127 (254)
74 3av3_A Phosphoribosylglycinami 84.1 6.1 0.00021 33.8 9.4 106 5-141 2-113 (212)
75 3fgn_A Dethiobiotin synthetase 83.8 22 0.00075 31.2 13.6 120 5-142 25-167 (251)
76 3iqw_A Tail-anchored protein t 83.6 3.9 0.00013 37.9 8.6 41 4-44 13-54 (334)
77 3q0i_A Methionyl-tRNA formyltr 83.2 11 0.00037 34.5 11.2 35 4-43 5-39 (318)
78 3igf_A ALL4481 protein; two-do 82.9 0.78 2.7E-05 43.4 3.5 37 6-42 1-38 (374)
79 1kjn_A MTH0777; hypotethical p 82.8 2.2 7.7E-05 33.7 5.4 49 1-49 1-51 (157)
80 2ejb_A Probable aromatic acid 82.5 2.2 7.4E-05 35.9 5.7 45 6-51 1-45 (189)
81 2q5c_A NTRC family transcripti 82.4 5.5 0.00019 33.6 8.4 109 18-142 36-170 (196)
82 3q9l_A Septum site-determining 82.4 8.4 0.00029 33.7 10.1 39 6-44 1-41 (260)
83 4dzz_A Plasmid partitioning pr 82.2 6.4 0.00022 33.0 9.0 37 8-44 2-40 (206)
84 3t5t_A Putative glycosyltransf 82.0 8.5 0.00029 37.7 10.6 112 328-453 353-473 (496)
85 1sbz_A Probable aromatic acid 81.3 1.9 6.5E-05 36.5 5.0 45 7-52 1-46 (197)
86 3zq6_A Putative arsenical pump 79.1 2.3 8E-05 39.2 5.3 38 7-44 14-52 (324)
87 1g5t_A COB(I)alamin adenosyltr 77.9 21 0.00071 30.0 10.3 97 6-121 28-130 (196)
88 2pn1_A Carbamoylphosphate synt 77.5 5.3 0.00018 36.7 7.3 32 5-42 3-36 (331)
89 2dzd_A Pyruvate carboxylase; b 77.5 10 0.00036 36.6 9.8 39 1-44 1-39 (461)
90 3ug7_A Arsenical pump-driving 77.4 4.9 0.00017 37.4 7.1 50 4-54 23-73 (349)
91 3nb0_A Glycogen [starch] synth 77.1 16 0.00055 37.2 10.9 40 333-374 499-551 (725)
92 2yxb_A Coenzyme B12-dependent 77.0 2.8 9.6E-05 34.2 4.6 48 5-52 17-64 (161)
93 3vot_A L-amino acid ligase, BL 76.7 6.8 0.00023 37.5 8.1 98 1-135 1-101 (425)
94 3llv_A Exopolyphosphatase-rela 76.5 1.3 4.5E-05 35.0 2.5 37 1-42 1-37 (141)
95 2vqe_B 30S ribosomal protein S 76.4 7.1 0.00024 34.4 7.2 35 109-143 156-192 (256)
96 3qjg_A Epidermin biosynthesis 76.0 3.3 0.00011 34.3 4.8 39 7-46 6-44 (175)
97 3pdi_A Nitrogenase MOFE cofact 75.2 5.5 0.00019 39.0 7.0 90 7-139 333-426 (483)
98 2ph1_A Nucleotide-binding prot 73.8 29 0.00098 30.4 11.0 42 5-46 16-59 (262)
99 1e2b_A Enzyme IIB-cellobiose; 73.0 6.5 0.00022 29.4 5.4 39 4-42 1-39 (106)
100 3mc3_A DSRE/DSRF-like family p 72.9 6.3 0.00022 30.9 5.6 40 6-45 15-57 (134)
101 2gt1_A Lipopolysaccharide hept 72.8 5.2 0.00018 36.6 5.9 44 7-50 1-46 (326)
102 1uan_A Hypothetical protein TT 72.7 7 0.00024 33.9 6.4 36 6-41 1-36 (227)
103 1xmp_A PURE, phosphoribosylami 72.5 37 0.0013 27.5 10.4 142 266-435 10-165 (170)
104 3lqk_A Dipicolinate synthase s 72.4 3.9 0.00013 34.7 4.5 39 5-44 6-45 (201)
105 3bfv_A CAPA1, CAPB2, membrane 71.9 19 0.00064 32.0 9.2 39 6-44 81-121 (271)
106 4b4k_A N5-carboxyaminoimidazol 71.4 41 0.0014 27.6 10.9 139 266-434 21-175 (181)
107 3ghy_A Ketopantoate reductase 71.3 2.2 7.5E-05 39.6 2.9 42 5-51 2-43 (335)
108 3u7q_A Nitrogenase molybdenum- 70.8 8.7 0.0003 37.6 7.2 92 7-139 349-442 (492)
109 1fmt_A Methionyl-tRNA FMet for 70.8 22 0.00075 32.4 9.5 96 6-141 3-112 (314)
110 1y80_A Predicted cobalamin bin 70.8 6.1 0.00021 33.7 5.5 47 6-52 88-134 (210)
111 3pdi_B Nitrogenase MOFE cofact 70.7 7.5 0.00026 37.7 6.6 34 100-138 366-399 (458)
112 3dfz_A SIRC, precorrin-2 dehyd 70.4 31 0.0011 29.6 9.8 150 260-432 26-186 (223)
113 3u7q_B Nitrogenase molybdenum- 70.3 39 0.0014 33.2 11.8 94 7-138 365-469 (523)
114 2ixd_A LMBE-related protein; h 70.2 8.8 0.0003 33.6 6.4 34 7-41 4-38 (242)
115 3ih5_A Electron transfer flavo 70.1 3.5 0.00012 35.5 3.7 112 6-141 3-124 (217)
116 1jx7_A Hypothetical protein YC 70.1 6.3 0.00022 29.7 4.9 39 6-44 1-44 (117)
117 2i2x_B MTAC, methyltransferase 69.5 7.6 0.00026 34.4 6.0 47 5-51 122-168 (258)
118 2gt1_A Lipopolysaccharide hept 69.5 3.8 0.00013 37.6 4.2 131 266-413 177-322 (326)
119 1mvl_A PPC decarboxylase athal 69.4 6 0.0002 33.8 5.0 40 5-46 18-57 (209)
120 2xw6_A MGS, methylglyoxal synt 69.2 11 0.00037 29.5 6.0 101 5-141 2-114 (134)
121 1bg6_A N-(1-D-carboxylethyl)-L 69.0 2.8 9.6E-05 39.1 3.2 43 4-51 2-45 (359)
122 1uqt_A Alpha, alpha-trehalose- 68.4 26 0.00088 34.2 10.0 109 329-453 333-454 (482)
123 3kcq_A Phosphoribosylglycinami 68.1 19 0.00066 30.7 8.0 107 2-141 4-113 (215)
124 1pjq_A CYSG, siroheme synthase 67.9 53 0.0018 31.7 12.1 147 266-432 12-168 (457)
125 3cio_A ETK, tyrosine-protein k 67.6 21 0.00072 32.2 8.7 38 7-44 104-143 (299)
126 1g63_A Epidermin modifying enz 67.6 5.1 0.00017 33.4 4.1 39 7-46 3-41 (181)
127 3mcu_A Dipicolinate synthase, 67.5 5.9 0.0002 33.7 4.6 39 5-44 4-43 (207)
128 4huj_A Uncharacterized protein 67.4 2.3 8E-05 36.6 2.1 34 4-42 21-54 (220)
129 2ew2_A 2-dehydropantoate 2-red 67.3 3.1 0.00011 37.9 3.1 33 5-42 2-34 (316)
130 2jzc_A UDP-N-acetylglucosamine 67.2 16 0.00053 31.6 7.2 39 7-45 28-73 (224)
131 3tqq_A Methionyl-tRNA formyltr 66.7 30 0.001 31.5 9.4 33 7-44 3-35 (314)
132 3ouz_A Biotin carboxylase; str 66.5 12 0.0004 36.1 7.2 34 6-44 6-39 (446)
133 3kkl_A Probable chaperone prot 66.4 9.1 0.00031 33.6 5.7 40 4-43 1-51 (244)
134 3da8_A Probable 5'-phosphoribo 66.2 16 0.00055 31.3 7.1 112 2-141 8-120 (215)
135 2a5l_A Trp repressor binding p 66.1 7.6 0.00026 32.5 5.1 39 4-42 3-42 (200)
136 3eag_A UDP-N-acetylmuramate:L- 66.1 5.1 0.00017 36.9 4.2 35 4-42 2-36 (326)
137 3czc_A RMPB; alpha/beta sandwi 65.5 5.3 0.00018 30.1 3.5 41 1-41 13-55 (110)
138 3gpi_A NAD-dependent epimerase 65.5 7.1 0.00024 34.8 5.1 34 4-42 1-34 (286)
139 2xj4_A MIPZ; replication, cell 65.3 6.9 0.00024 35.2 4.9 41 4-44 1-43 (286)
140 3bbn_B Ribosomal protein S2; s 64.6 9.4 0.00032 33.1 5.3 31 111-141 157-189 (231)
141 3io3_A DEHA2D07832P; chaperone 64.4 20 0.00069 33.2 8.0 45 5-50 16-63 (348)
142 2zki_A 199AA long hypothetical 64.4 7 0.00024 32.7 4.5 37 5-42 3-40 (199)
143 2hmt_A YUAA protein; RCK, KTN, 64.3 3.1 0.00011 32.6 2.1 37 1-42 1-37 (144)
144 3l7i_A Teichoic acid biosynthe 64.3 23 0.00078 36.6 9.2 114 333-455 605-723 (729)
145 1jkx_A GART;, phosphoribosylgl 64.2 62 0.0021 27.5 10.4 103 7-141 1-110 (212)
146 1p3y_1 MRSD protein; flavoprot 64.1 4.6 0.00016 34.1 3.2 41 5-46 7-47 (194)
147 3ezx_A MMCP 1, monomethylamine 64.0 10 0.00036 32.4 5.5 47 6-52 92-138 (215)
148 1evy_A Glycerol-3-phosphate de 64.0 2.8 9.6E-05 39.4 2.0 34 4-42 13-46 (366)
149 2lnd_A De novo designed protei 63.7 7.9 0.00027 26.7 3.6 49 364-412 50-100 (112)
150 4grd_A N5-CAIR mutase, phospho 63.4 59 0.002 26.4 10.8 141 266-433 11-164 (173)
151 2vo1_A CTP synthase 1; pyrimid 63.0 8.1 0.00028 34.1 4.5 41 4-44 20-63 (295)
152 1qgu_B Protein (nitrogenase mo 62.9 28 0.00095 34.3 9.0 98 7-138 361-465 (519)
153 2pju_A Propionate catabolism o 62.7 36 0.0012 29.2 8.7 107 18-140 46-180 (225)
154 3obb_A Probable 3-hydroxyisobu 62.3 7.3 0.00025 35.4 4.4 33 5-42 2-34 (300)
155 1gsa_A Glutathione synthetase; 61.4 6.9 0.00024 35.4 4.2 37 6-42 1-40 (316)
156 4dll_A 2-hydroxy-3-oxopropiona 61.3 8.4 0.00029 35.3 4.8 34 4-42 29-62 (320)
157 3hwr_A 2-dehydropantoate 2-red 61.3 4.8 0.00016 37.0 3.0 43 4-51 17-59 (318)
158 1qkk_A DCTD, C4-dicarboxylate 61.2 30 0.001 27.0 7.7 58 364-425 74-131 (155)
159 1ydg_A Trp repressor binding p 61.1 11 0.00038 31.9 5.2 42 1-42 1-43 (211)
160 3tqr_A Phosphoribosylglycinami 60.9 32 0.0011 29.4 8.0 113 1-141 1-114 (215)
161 1id1_A Putative potassium chan 60.9 5.8 0.0002 31.7 3.2 33 5-42 2-34 (153)
162 3qsg_A NAD-binding phosphogluc 60.7 4 0.00014 37.3 2.4 34 4-42 22-56 (312)
163 3q9s_A DNA-binding response re 60.7 59 0.002 28.0 10.1 79 1-140 32-116 (249)
164 1qzu_A Hypothetical protein MD 60.3 8.2 0.00028 32.8 4.1 41 5-46 18-59 (206)
165 2h78_A Hibadh, 3-hydroxyisobut 60.0 6.7 0.00023 35.5 3.8 33 5-42 2-34 (302)
166 3oow_A Phosphoribosylaminoimid 59.6 68 0.0023 25.9 11.2 142 268-436 6-160 (166)
167 3hn2_A 2-dehydropantoate 2-red 59.4 9 0.00031 34.9 4.6 39 7-51 3-41 (312)
168 2dpo_A L-gulonate 3-dehydrogen 59.3 5.1 0.00017 36.8 2.8 37 1-42 1-37 (319)
169 4gi5_A Quinone reductase; prot 59.0 15 0.00052 32.9 5.8 38 4-41 20-60 (280)
170 3n7t_A Macrophage binding prot 58.8 19 0.00066 31.5 6.4 37 6-42 9-56 (247)
171 2r8r_A Sensor protein; KDPD, P 58.6 14 0.00049 31.8 5.4 39 6-44 6-44 (228)
172 3doj_A AT3G25530, dehydrogenas 58.6 6.9 0.00024 35.7 3.6 35 3-42 18-52 (310)
173 1kjq_A GART 2, phosphoribosylg 58.5 1.1E+02 0.0036 28.4 12.2 35 5-44 10-44 (391)
174 2vpq_A Acetyl-COA carboxylase; 58.1 22 0.00075 34.2 7.4 33 6-43 1-33 (451)
175 3tov_A Glycosyl transferase fa 58.0 23 0.00079 32.8 7.2 99 8-141 187-289 (349)
176 3r8n_B 30S ribosomal protein S 57.8 30 0.001 29.6 7.2 33 110-142 148-182 (218)
177 3p9x_A Phosphoribosylglycinami 57.7 76 0.0026 26.9 9.7 105 6-141 2-112 (211)
178 1mio_A Nitrogenase molybdenum 57.1 25 0.00085 34.8 7.6 35 99-138 446-480 (533)
179 1rw7_A YDR533CP; alpha-beta sa 57.1 19 0.00063 31.4 6.1 39 5-43 2-51 (243)
180 2qyt_A 2-dehydropantoate 2-red 56.5 3.7 0.00013 37.5 1.4 41 6-51 8-54 (317)
181 3f6r_A Flavodoxin; FMN binding 56.3 12 0.00042 29.5 4.4 38 6-43 1-39 (148)
182 3dm5_A SRP54, signal recogniti 56.1 26 0.00087 33.7 7.2 42 6-47 100-141 (443)
183 3goc_A Endonuclease V; alpha-b 55.9 19 0.00065 31.1 5.6 43 99-141 95-144 (237)
184 3c24_A Putative oxidoreductase 55.8 8.2 0.00028 34.6 3.6 32 6-42 11-43 (286)
185 4b4o_A Epimerase family protei 55.7 7.2 0.00024 35.1 3.2 32 7-42 1-32 (298)
186 2hy5_A Putative sulfurtransfer 55.4 25 0.00086 27.1 6.0 38 7-44 1-42 (130)
187 4ds3_A Phosphoribosylglycinami 55.3 40 0.0014 28.6 7.6 110 4-141 5-117 (209)
188 1yb4_A Tartronic semialdehyde 55.2 10 0.00034 34.1 4.1 32 5-41 2-33 (295)
189 2iz6_A Molybdenum cofactor car 55.2 86 0.0029 25.7 10.2 101 254-374 34-140 (176)
190 3dfu_A Uncharacterized protein 54.9 8.8 0.0003 33.3 3.5 33 5-42 5-37 (232)
191 3o1l_A Formyltetrahydrofolate 54.1 78 0.0027 28.6 9.7 106 4-141 103-212 (302)
192 1tvm_A PTS system, galactitol- 53.8 27 0.00091 26.3 5.7 38 4-41 19-57 (113)
193 3kjh_A CO dehydrogenase/acetyl 53.7 8.6 0.00029 33.4 3.3 38 7-44 1-38 (254)
194 3kuu_A Phosphoribosylaminoimid 53.5 90 0.0031 25.4 10.3 142 268-436 13-167 (174)
195 2ark_A Flavodoxin; FMN, struct 53.4 16 0.00055 30.3 4.8 39 4-42 2-42 (188)
196 3s2u_A UDP-N-acetylglucosamine 53.0 34 0.0011 31.8 7.5 36 267-304 3-38 (365)
197 4e12_A Diketoreductase; oxidor 53.0 9.6 0.00033 34.2 3.6 34 4-42 2-35 (283)
198 3mjf_A Phosphoribosylamine--gl 52.7 30 0.001 33.1 7.2 26 5-35 2-27 (431)
199 1u11_A PURE (N5-carboxyaminoim 52.7 96 0.0033 25.5 10.6 142 267-436 21-176 (182)
200 1lss_A TRK system potassium up 52.6 7.9 0.00027 30.0 2.6 32 6-42 4-35 (140)
201 3euw_A MYO-inositol dehydrogen 52.4 1E+02 0.0035 28.0 10.8 109 268-395 6-122 (344)
202 1psw_A ADP-heptose LPS heptosy 52.4 68 0.0023 29.1 9.6 99 8-140 182-288 (348)
203 2bln_A Protein YFBG; transfera 52.4 1.1E+02 0.0038 27.5 10.6 40 100-141 66-106 (305)
204 2w36_A Endonuclease V; hypoxan 52.3 22 0.00074 30.6 5.4 43 99-141 91-140 (225)
205 3i83_A 2-dehydropantoate 2-red 51.5 11 0.00039 34.3 3.9 39 7-51 3-41 (320)
206 1t1j_A Hypothetical protein; s 51.2 23 0.00078 27.3 4.9 35 4-38 5-47 (125)
207 1f0y_A HCDH, L-3-hydroxyacyl-C 50.9 8.8 0.0003 34.8 3.0 34 4-42 13-46 (302)
208 1meo_A Phosophoribosylglycinam 50.7 1.1E+02 0.0037 25.8 9.7 107 7-141 1-110 (209)
209 4gbj_A 6-phosphogluconate dehy 50.6 12 0.00042 33.8 3.9 29 8-41 7-35 (297)
210 3r6d_A NAD-dependent epimerase 50.4 18 0.00062 30.6 4.8 36 4-42 2-38 (221)
211 1g3q_A MIND ATPase, cell divis 50.4 18 0.00062 31.0 4.9 39 6-44 1-41 (237)
212 3tri_A Pyrroline-5-carboxylate 50.3 24 0.00082 31.5 5.8 33 5-42 2-37 (280)
213 3q2i_A Dehydrogenase; rossmann 49.6 97 0.0033 28.4 10.1 110 267-395 14-132 (354)
214 2jk1_A HUPR, hydrogenase trans 49.4 60 0.002 24.5 7.5 62 364-428 71-132 (139)
215 2w70_A Biotin carboxylase; lig 49.4 37 0.0013 32.5 7.4 31 7-42 3-33 (449)
216 3l4e_A Uncharacterized peptida 49.3 39 0.0013 28.5 6.6 49 254-302 15-63 (206)
217 4egb_A DTDP-glucose 4,6-dehydr 49.0 1.5E+02 0.0051 26.7 11.9 34 4-41 22-55 (346)
218 1dhr_A Dihydropteridine reduct 49.0 17 0.00058 31.4 4.4 39 1-42 1-39 (241)
219 3lp6_A Phosphoribosylaminoimid 48.7 1.1E+02 0.0037 24.9 11.4 139 266-432 6-156 (174)
220 3of5_A Dethiobiotin synthetase 48.4 22 0.00076 30.6 5.0 38 4-41 2-40 (228)
221 2l2q_A PTS system, cellobiose- 48.4 27 0.00091 26.0 4.9 36 6-41 4-39 (109)
222 3pdu_A 3-hydroxyisobutyrate de 48.3 12 0.00039 33.6 3.3 32 6-42 1-32 (287)
223 3rg8_A Phosphoribosylaminoimid 47.6 1.1E+02 0.0037 24.6 10.9 137 268-432 3-149 (159)
224 3r0j_A Possible two component 47.3 1.3E+02 0.0045 25.6 10.4 79 1-140 18-103 (250)
225 2g1u_A Hypothetical protein TM 47.3 17 0.00059 28.9 3.9 33 5-42 18-50 (155)
226 2qs7_A Uncharacterized protein 47.2 22 0.00074 28.2 4.4 43 8-50 9-52 (144)
227 3ic5_A Putative saccharopine d 47.1 13 0.00046 27.5 3.1 33 5-42 4-37 (118)
228 3ga2_A Endonuclease V; alpha-b 47.0 23 0.0008 30.7 4.8 43 99-141 97-146 (246)
229 4e21_A 6-phosphogluconate dehy 46.3 9.7 0.00033 35.6 2.5 34 4-42 20-53 (358)
230 3g79_A NDP-N-acetyl-D-galactos 46.3 19 0.00066 35.0 4.7 36 4-44 16-53 (478)
231 3d7n_A Flavodoxin, WRBA-like p 46.2 7.6 0.00026 32.5 1.6 37 1-37 1-38 (193)
232 2o6l_A UDP-glucuronosyltransfe 46.1 1.1E+02 0.0037 24.2 9.4 90 8-140 22-114 (170)
233 2dwc_A PH0318, 433AA long hypo 46.1 1.9E+02 0.0066 27.2 11.9 34 6-44 19-52 (433)
234 2r6j_A Eugenol synthase 1; phe 45.9 17 0.00059 32.8 4.2 40 1-44 5-45 (318)
235 2b8t_A Thymidine kinase; deoxy 45.8 90 0.0031 26.6 8.5 38 7-44 12-50 (223)
236 3e18_A Oxidoreductase; dehydro 45.8 1.6E+02 0.0055 27.0 11.0 109 267-395 6-122 (359)
237 3i4f_A 3-oxoacyl-[acyl-carrier 45.7 27 0.00091 30.5 5.3 39 1-42 1-39 (264)
238 3lrx_A Putative hydrogenase; a 45.6 17 0.00056 29.3 3.5 37 7-46 24-60 (158)
239 2q62_A ARSH; alpha/beta, flavo 45.6 28 0.00094 30.5 5.2 40 3-42 31-73 (247)
240 3rjz_A N-type ATP pyrophosphat 45.4 1.5E+02 0.0051 25.6 10.7 38 98-137 79-121 (237)
241 3n0v_A Formyltetrahydrofolate 45.3 66 0.0022 28.8 7.7 106 4-141 88-197 (286)
242 3g0o_A 3-hydroxyisobutyrate de 45.3 10 0.00036 34.3 2.5 33 5-42 6-38 (303)
243 1p9o_A Phosphopantothenoylcyst 45.2 13 0.00043 34.0 3.0 37 9-45 40-90 (313)
244 3cky_A 2-hydroxymethyl glutara 45.2 20 0.0007 32.1 4.5 33 5-42 3-35 (301)
245 3b6i_A Flavoprotein WRBA; flav 44.8 27 0.00091 28.9 4.9 37 6-42 1-39 (198)
246 3lou_A Formyltetrahydrofolate 44.7 81 0.0028 28.3 8.3 106 4-141 93-202 (292)
247 3k96_A Glycerol-3-phosphate de 44.5 12 0.0004 35.0 2.8 33 5-42 28-60 (356)
248 2c5m_A CTP synthase; cytidine 44.3 16 0.00055 32.0 3.3 38 5-42 21-61 (294)
249 1wcv_1 SOJ, segregation protei 44.3 17 0.00057 31.9 3.7 44 1-44 1-45 (257)
250 3p0r_A Azoreductase; structura 44.1 22 0.00077 30.1 4.3 38 5-42 3-47 (211)
251 1vpd_A Tartronate semialdehyde 43.8 21 0.00071 32.0 4.3 31 7-42 6-36 (299)
252 4hb9_A Similarities with proba 43.8 13 0.00044 34.9 3.0 29 7-40 2-30 (412)
253 3rpe_A MDAB, modulator of drug 43.7 27 0.00092 29.9 4.7 39 4-42 23-68 (218)
254 1cp2_A CP2, nitrogenase iron p 43.5 24 0.00083 30.9 4.7 38 6-43 1-38 (269)
255 3lyu_A Putative hydrogenase; t 43.5 21 0.00073 28.0 3.8 38 7-47 19-56 (142)
256 1ehi_A LMDDL2, D-alanine:D-lac 43.4 22 0.00074 33.4 4.5 38 5-42 2-44 (377)
257 3u7i_A FMN-dependent NADH-azor 42.7 25 0.00087 30.1 4.5 39 4-42 2-49 (223)
258 3qha_A Putative oxidoreductase 42.4 14 0.00049 33.2 3.0 32 6-42 15-46 (296)
259 2r85_A PURP protein PF1517; AT 42.4 22 0.00076 32.3 4.4 32 7-44 3-34 (334)
260 2raf_A Putative dinucleotide-b 42.4 17 0.00057 30.8 3.2 33 5-42 18-50 (209)
261 4hkt_A Inositol 2-dehydrogenas 42.1 1.2E+02 0.0042 27.3 9.5 107 268-395 5-120 (331)
262 1rtt_A Conserved hypothetical 42.1 25 0.00084 29.2 4.2 40 1-41 1-43 (193)
263 3kcn_A Adenylate cyclase homol 42.0 71 0.0024 24.5 6.9 48 364-413 75-123 (151)
264 3s40_A Diacylglycerol kinase; 42.0 34 0.0012 30.8 5.5 42 1-42 3-47 (304)
265 3nbm_A PTS system, lactose-spe 41.9 25 0.00086 26.3 3.7 38 4-41 4-41 (108)
266 1efv_A Electron transfer flavo 41.9 40 0.0014 30.7 5.8 41 99-141 76-119 (315)
267 3grc_A Sensor protein, kinase; 41.8 44 0.0015 25.3 5.5 38 1-42 1-38 (140)
268 1ks9_A KPA reductase;, 2-dehyd 41.7 17 0.00057 32.4 3.3 31 7-42 1-31 (291)
269 3rot_A ABC sugar transporter, 41.5 1.8E+02 0.0061 25.4 10.5 39 100-141 53-95 (297)
270 3f2v_A General stress protein 41.5 21 0.00071 29.9 3.6 37 6-42 1-38 (192)
271 4e3z_A Putative oxidoreductase 41.5 38 0.0013 29.7 5.7 36 4-42 23-58 (272)
272 3e9m_A Oxidoreductase, GFO/IDH 41.0 1.6E+02 0.0054 26.6 10.0 110 268-395 7-124 (330)
273 1hyq_A MIND, cell division inh 40.7 25 0.00084 30.7 4.2 39 6-44 1-41 (263)
274 2hy5_B Intracellular sulfur ox 40.7 46 0.0016 25.9 5.3 39 6-44 5-46 (136)
275 2i87_A D-alanine-D-alanine lig 40.6 15 0.00051 34.3 2.8 38 5-42 2-43 (364)
276 3db2_A Putative NADPH-dependen 40.2 83 0.0028 28.9 8.0 107 267-395 6-123 (354)
277 3dhn_A NAD-dependent epimerase 40.1 30 0.001 29.2 4.6 33 6-42 4-36 (227)
278 4hs4_A Chromate reductase; tri 40.0 17 0.00058 30.6 2.9 37 1-38 1-40 (199)
279 2vns_A Metalloreductase steap3 40.0 16 0.00054 31.1 2.7 33 5-42 27-59 (215)
280 1e4e_A Vancomycin/teicoplanin 39.8 19 0.00066 33.1 3.5 38 5-42 2-43 (343)
281 3qrx_B Melittin; calcium-bindi 39.8 9.4 0.00032 19.6 0.7 18 354-371 1-18 (26)
282 3ors_A N5-carboxyaminoimidazol 39.8 1.5E+02 0.005 23.9 11.2 139 267-432 3-154 (163)
283 2q3e_A UDP-glucose 6-dehydroge 39.7 24 0.00082 34.2 4.3 34 4-42 3-38 (467)
284 1ulz_A Pyruvate carboxylase N- 39.5 51 0.0017 31.6 6.6 31 7-42 3-33 (451)
285 4gwg_A 6-phosphogluconate dehy 39.5 15 0.0005 35.9 2.6 34 4-42 2-35 (484)
286 2gk4_A Conserved hypothetical 39.5 21 0.00072 30.9 3.4 22 23-44 32-53 (232)
287 2z04_A Phosphoribosylaminoimid 39.1 34 0.0012 31.6 5.2 34 6-44 1-34 (365)
288 2xdo_A TETX2 protein; tetracyc 38.9 20 0.00068 33.7 3.5 37 1-42 21-57 (398)
289 3qjg_A Epidermin biosynthesis 38.8 1.2E+02 0.0041 24.7 7.8 114 267-392 6-143 (175)
290 3slg_A PBGP3 protein; structur 38.8 33 0.0011 31.7 5.0 37 2-42 20-57 (372)
291 3m2t_A Probable dehydrogenase; 38.6 1.4E+02 0.0048 27.4 9.3 110 268-395 7-125 (359)
292 3k9g_A PF-32 protein; ssgcid, 38.5 28 0.00096 30.5 4.2 39 5-44 25-65 (267)
293 1z82_A Glycerol-3-phosphate de 38.4 18 0.00063 33.1 3.1 31 7-42 15-45 (335)
294 3l6d_A Putative oxidoreductase 38.2 16 0.00055 33.1 2.6 33 5-42 8-40 (306)
295 3ego_A Probable 2-dehydropanto 38.1 17 0.00058 33.0 2.7 39 7-51 3-42 (307)
296 3r6w_A FMN-dependent NADH-azor 37.9 26 0.00089 29.6 3.8 37 6-42 1-43 (212)
297 2yvq_A Carbamoyl-phosphate syn 37.9 71 0.0024 25.1 6.1 97 10-138 27-131 (143)
298 3zzm_A Bifunctional purine bio 37.8 77 0.0026 30.8 7.2 96 7-121 11-112 (523)
299 3bul_A Methionine synthase; tr 37.7 37 0.0013 33.8 5.3 47 6-52 98-144 (579)
300 3sbx_A Putative uncharacterize 37.7 45 0.0015 27.8 5.0 39 4-43 11-53 (189)
301 2a33_A Hypothetical protein; s 37.5 54 0.0018 27.9 5.6 39 4-42 11-53 (215)
302 3tl4_X Glutaminyl-tRNA synthet 37.5 1.1E+02 0.0039 25.2 7.4 71 376-452 100-179 (187)
303 3i12_A D-alanine-D-alanine lig 37.5 22 0.00075 33.1 3.5 38 5-42 2-43 (364)
304 3qvl_A Putative hydantoin race 37.4 1.2E+02 0.0041 26.2 8.1 36 7-42 2-38 (245)
305 2c20_A UDP-glucose 4-epimerase 37.3 21 0.0007 32.4 3.2 33 6-42 1-33 (330)
306 2afh_E Nitrogenase iron protei 37.1 36 0.0012 30.3 4.8 38 6-43 2-39 (289)
307 3l4b_C TRKA K+ channel protien 36.7 11 0.00038 32.1 1.2 31 7-42 1-31 (218)
308 1vhq_A Enhancing lycopene bios 36.7 61 0.0021 27.7 6.1 42 1-43 1-47 (232)
309 4ezb_A Uncharacterized conserv 36.6 20 0.0007 32.6 3.0 32 6-42 24-56 (317)
310 3to5_A CHEY homolog; alpha(5)b 36.5 36 0.0012 26.4 4.1 47 364-412 86-132 (134)
311 3end_A Light-independent proto 36.5 40 0.0014 30.3 5.0 38 6-43 41-78 (307)
312 3ax6_A Phosphoribosylaminoimid 36.4 48 0.0016 30.8 5.7 33 6-43 1-33 (380)
313 1hdo_A Biliverdin IX beta redu 36.4 47 0.0016 27.3 5.2 32 7-42 4-35 (206)
314 3nrb_A Formyltetrahydrofolate 36.4 74 0.0025 28.5 6.6 108 4-141 86-196 (287)
315 2d1p_A TUSD, hypothetical UPF0 36.4 60 0.0021 25.4 5.4 38 7-44 13-54 (140)
316 1t5b_A Acyl carrier protein ph 36.2 38 0.0013 28.0 4.5 37 6-42 1-43 (201)
317 3lqk_A Dipicolinate synthase s 36.2 1.9E+02 0.0065 24.2 9.1 52 361-413 119-186 (201)
318 1txg_A Glycerol-3-phosphate de 36.0 18 0.0006 33.1 2.5 31 7-42 1-31 (335)
319 3s40_A Diacylglycerol kinase; 35.6 94 0.0032 27.9 7.4 83 267-374 10-98 (304)
320 3ius_A Uncharacterized conserv 35.5 19 0.00064 31.9 2.6 33 6-43 5-37 (286)
321 3kto_A Response regulator rece 35.3 50 0.0017 24.9 4.8 38 1-42 1-38 (136)
322 4dgk_A Phytoene dehydrogenase; 35.2 15 0.0005 35.9 1.9 30 6-40 1-30 (501)
323 3e5n_A D-alanine-D-alanine lig 35.2 25 0.00085 33.1 3.5 39 4-42 20-62 (386)
324 2vrn_A Protease I, DR1199; cys 35.2 80 0.0027 25.8 6.4 40 3-43 6-45 (190)
325 1iow_A DD-ligase, DDLB, D-ALA\ 35.1 47 0.0016 29.6 5.3 37 7-43 3-43 (306)
326 3ot1_A 4-methyl-5(B-hydroxyeth 35.1 65 0.0022 27.0 5.9 37 6-43 9-45 (208)
327 3obi_A Formyltetrahydrofolate 35.1 72 0.0024 28.6 6.3 106 4-141 87-197 (288)
328 1u0t_A Inorganic polyphosphate 34.9 35 0.0012 30.9 4.3 37 6-42 4-41 (307)
329 1sqs_A Conserved hypothetical 34.7 40 0.0014 29.1 4.5 37 6-42 1-41 (242)
330 4g65_A TRK system potassium up 34.6 11 0.00038 36.6 0.9 33 5-42 2-34 (461)
331 3rc1_A Sugar 3-ketoreductase; 34.5 1.2E+02 0.0041 27.7 8.1 111 267-395 28-146 (350)
332 3orf_A Dihydropteridine reduct 34.4 38 0.0013 29.3 4.4 35 5-42 20-54 (251)
333 2hna_A Protein MIOC, flavodoxi 34.2 51 0.0017 25.7 4.8 36 6-41 1-37 (147)
334 4f3r_A Phosphopantetheine aden 34.1 45 0.0015 26.9 4.4 39 4-42 2-40 (162)
335 3fwz_A Inner membrane protein 34.0 18 0.00062 28.2 2.0 30 6-40 7-36 (140)
336 3ea0_A ATPase, para family; al 33.9 36 0.0012 29.2 4.1 39 6-44 3-44 (245)
337 3g1w_A Sugar ABC transporter; 33.8 2.4E+02 0.0081 24.6 11.5 36 6-41 4-41 (305)
338 2zts_A Putative uncharacterize 33.7 1.8E+02 0.0061 24.5 8.8 44 8-51 32-76 (251)
339 1u9c_A APC35852; structural ge 33.6 71 0.0024 27.0 5.9 39 5-43 3-51 (224)
340 2cvz_A Dehydrogenase, 3-hydrox 33.4 23 0.0008 31.4 2.9 31 6-42 1-31 (289)
341 1qyd_A Pinoresinol-lariciresin 33.3 43 0.0015 29.9 4.7 34 6-43 4-37 (313)
342 3f8d_A Thioredoxin reductase ( 33.1 26 0.00091 31.3 3.2 31 7-42 16-46 (323)
343 1wrd_A TOM1, target of MYB pro 33.0 1.3E+02 0.0044 22.1 6.3 34 398-437 3-36 (103)
344 1z7e_A Protein aRNA; rossmann 32.9 59 0.002 33.0 6.1 40 100-141 66-106 (660)
345 3e61_A Putative transcriptiona 32.8 2.1E+02 0.0073 24.4 9.3 31 111-141 64-95 (277)
346 2hpv_A FMN-dependent NADH-azor 32.7 43 0.0015 27.9 4.3 37 6-42 1-44 (208)
347 3nva_A CTP synthase; rossman f 32.5 47 0.0016 32.5 4.9 39 6-44 2-43 (535)
348 3g17_A Similar to 2-dehydropan 32.4 12 0.00041 33.7 0.7 32 7-43 3-34 (294)
349 2fb6_A Conserved hypothetical 32.4 42 0.0014 25.4 3.7 38 7-44 8-49 (117)
350 2ahr_A Putative pyrroline carb 32.2 26 0.00087 30.7 2.9 33 5-42 2-34 (259)
351 1o97_C Electron transferring f 32.2 50 0.0017 29.2 4.7 41 99-141 102-148 (264)
352 3hbl_A Pyruvate carboxylase; T 32.2 1.6E+02 0.0056 32.1 9.6 35 6-45 4-38 (1150)
353 3ew7_A LMO0794 protein; Q8Y8U8 32.1 30 0.001 29.0 3.2 33 7-43 1-33 (221)
354 3h7a_A Short chain dehydrogena 32.0 48 0.0017 28.7 4.7 33 7-42 7-39 (252)
355 2rjn_A Response regulator rece 32.0 26 0.00088 27.4 2.6 57 364-424 78-135 (154)
356 1ydh_A AT5G11950; structural g 32.0 73 0.0025 27.1 5.5 40 4-43 7-50 (216)
357 2lpm_A Two-component response 31.9 36 0.0012 26.0 3.3 36 102-139 46-86 (123)
358 2ehd_A Oxidoreductase, oxidore 31.8 64 0.0022 27.3 5.4 33 7-42 5-37 (234)
359 4eg0_A D-alanine--D-alanine li 31.8 66 0.0023 29.0 5.7 38 6-43 13-54 (317)
360 2vzf_A NADH-dependent FMN redu 31.6 48 0.0016 27.5 4.4 37 6-42 2-42 (197)
361 2rcy_A Pyrroline carboxylate r 31.6 15 0.0005 32.3 1.2 33 5-42 3-39 (262)
362 3ksm_A ABC-type sugar transpor 31.6 2.4E+02 0.0082 24.0 10.2 40 99-141 49-93 (276)
363 1i36_A Conserved hypothetical 31.5 25 0.00085 30.8 2.7 30 7-41 1-30 (264)
364 2o3j_A UDP-glucose 6-dehydroge 31.4 42 0.0014 32.7 4.5 34 4-42 7-42 (481)
365 3c1o_A Eugenol synthase; pheny 31.3 48 0.0017 29.7 4.7 34 6-43 4-37 (321)
366 2qxy_A Response regulator; reg 31.3 1.6E+02 0.0056 21.9 8.1 48 364-413 74-121 (142)
367 3ksu_A 3-oxoacyl-acyl carrier 31.1 48 0.0016 29.0 4.5 32 8-42 12-43 (262)
368 3oti_A CALG3; calicheamicin, T 31.1 1.8E+02 0.0062 26.8 8.9 90 7-138 232-325 (398)
369 4etm_A LMPTP, low molecular we 31.1 20 0.00069 29.4 1.8 15 1-15 13-27 (173)
370 4gdh_A DJ-1, uncharacterized p 31.1 42 0.0014 27.9 3.9 39 5-44 3-41 (194)
371 3gl9_A Response regulator; bet 31.0 88 0.003 22.9 5.5 38 103-142 40-86 (122)
372 3dtt_A NADP oxidoreductase; st 30.9 33 0.0011 29.7 3.4 34 4-42 17-50 (245)
373 3dii_A Short-chain dehydrogena 30.9 47 0.0016 28.6 4.4 33 7-42 2-34 (247)
374 3h2s_A Putative NADH-flavin re 30.6 33 0.0011 28.9 3.2 32 7-42 1-32 (224)
375 3edm_A Short chain dehydrogena 30.6 68 0.0023 27.8 5.4 32 8-42 9-40 (259)
376 3nrb_A Formyltetrahydrofolate 30.4 1.7E+02 0.0057 26.1 7.9 115 286-426 155-271 (287)
377 1mio_B Nitrogenase molybdenum 30.4 44 0.0015 32.2 4.4 34 100-138 376-409 (458)
378 2q1w_A Putative nucleotide sug 30.3 32 0.0011 31.2 3.3 35 4-42 19-53 (333)
379 2a33_A Hypothetical protein; s 30.2 2E+02 0.0067 24.4 8.0 43 330-373 94-147 (215)
380 3osu_A 3-oxoacyl-[acyl-carrier 30.1 82 0.0028 27.0 5.8 34 6-42 3-36 (246)
381 3pef_A 6-phosphogluconate dehy 30.0 32 0.0011 30.6 3.2 31 7-42 2-32 (287)
382 1jay_A Coenzyme F420H2:NADP+ o 30.0 33 0.0011 28.7 3.2 31 7-42 1-32 (212)
383 3f5d_A Protein YDEA; unknow pr 30.0 48 0.0016 27.9 4.1 39 5-44 2-41 (206)
384 3h75_A Periplasmic sugar-bindi 29.9 3E+02 0.01 24.6 10.2 41 99-141 51-95 (350)
385 1xjc_A MOBB protein homolog; s 29.8 90 0.0031 25.3 5.6 40 5-44 3-42 (169)
386 1xrs_B D-lysine 5,6-aminomutas 29.8 32 0.0011 30.4 3.0 47 6-52 120-175 (262)
387 1mv8_A GMD, GDP-mannose 6-dehy 29.7 45 0.0015 31.9 4.3 31 7-42 1-31 (436)
388 2qh9_A UPF0215 protein AF_1433 29.7 89 0.003 25.8 5.5 40 100-139 51-98 (184)
389 4em8_A Ribose 5-phosphate isom 29.7 76 0.0026 25.1 4.8 36 3-42 4-41 (148)
390 3to5_A CHEY homolog; alpha(5)b 29.6 76 0.0026 24.5 4.9 37 104-142 52-97 (134)
391 3pnx_A Putative sulfurtransfer 29.5 88 0.003 25.2 5.3 43 9-51 8-50 (160)
392 1eiw_A Hypothetical protein MT 29.5 44 0.0015 25.0 3.3 65 341-412 36-109 (111)
393 2b69_A UDP-glucuronate decarbo 29.5 34 0.0012 31.2 3.3 35 4-42 25-59 (343)
394 2o1e_A YCDH; alpha-beta protei 29.5 3E+02 0.01 24.6 9.7 43 99-141 226-271 (312)
395 3lk7_A UDP-N-acetylmuramoylala 29.4 59 0.002 31.2 5.1 33 5-42 8-40 (451)
396 3l77_A Short-chain alcohol deh 28.9 56 0.0019 27.8 4.5 33 7-42 2-34 (235)
397 3foj_A Uncharacterized protein 28.9 99 0.0034 22.0 5.3 32 7-42 57-88 (100)
398 3obi_A Formyltetrahydrofolate 28.9 1.7E+02 0.0058 26.1 7.7 115 286-426 156-272 (288)
399 3db2_A Putative NADPH-dependen 28.8 1.4E+02 0.0049 27.2 7.6 35 3-42 2-37 (354)
400 3pid_A UDP-glucose 6-dehydroge 28.8 33 0.0011 32.9 3.1 33 4-42 34-66 (432)
401 3rc1_A Sugar 3-ketoreductase; 28.8 87 0.003 28.7 6.0 36 3-42 24-60 (350)
402 2an1_A Putative kinase; struct 28.7 29 0.00099 31.1 2.6 33 339-373 59-95 (292)
403 2i2c_A Probable inorganic poly 28.7 23 0.00078 31.5 1.9 28 344-373 36-69 (272)
404 3guy_A Short-chain dehydrogena 28.7 42 0.0014 28.5 3.6 33 7-42 1-33 (230)
405 4gmf_A Yersiniabactin biosynth 28.6 1.7E+02 0.0059 27.1 8.0 126 265-410 6-141 (372)
406 1zcj_A Peroxisomal bifunctiona 28.5 39 0.0013 32.6 3.7 34 4-42 35-68 (463)
407 2gf2_A Hibadh, 3-hydroxyisobut 28.4 35 0.0012 30.4 3.1 31 7-42 1-31 (296)
408 3moi_A Probable dehydrogenase; 28.4 1.8E+02 0.0062 27.0 8.3 63 333-395 52-121 (387)
409 1qyc_A Phenylcoumaran benzylic 28.4 45 0.0016 29.6 3.9 33 6-43 4-37 (308)
410 3ged_A Short-chain dehydrogena 28.3 53 0.0018 28.6 4.2 33 7-42 2-34 (247)
411 3gem_A Short chain dehydrogena 28.3 43 0.0015 29.2 3.7 33 8-43 28-60 (260)
412 3hl0_A Maleylacetate reductase 28.3 1.6E+02 0.0054 27.1 7.7 39 102-142 80-121 (353)
413 3o1l_A Formyltetrahydrofolate 28.1 3.1E+02 0.011 24.6 9.3 118 283-426 168-287 (302)
414 1oi4_A Hypothetical protein YH 28.0 1.2E+02 0.0042 24.9 6.3 38 5-43 22-59 (193)
415 2gkg_A Response regulator homo 28.0 70 0.0024 23.3 4.5 46 364-412 79-124 (127)
416 3rp8_A Flavoprotein monooxygen 27.9 35 0.0012 32.1 3.2 34 4-42 21-54 (407)
417 2qv7_A Diacylglycerol kinase D 27.9 1.1E+02 0.0038 27.8 6.6 82 269-374 28-115 (337)
418 2d1p_B TUSC, hypothetical UPF0 27.9 1.1E+02 0.0036 23.0 5.4 37 8-44 3-42 (119)
419 2uyy_A N-PAC protein; long-cha 27.7 39 0.0013 30.5 3.4 32 6-42 30-61 (316)
420 2gdz_A NAD+-dependent 15-hydro 27.7 89 0.003 27.1 5.7 32 8-42 8-39 (267)
421 3i7m_A XAA-Pro dipeptidase; st 27.7 33 0.0011 26.6 2.5 35 18-52 1-35 (140)
422 3gi1_A LBP, laminin-binding pr 27.6 2E+02 0.0069 25.4 8.1 39 100-140 219-259 (286)
423 1d4a_A DT-diaphorase, quinone 27.6 67 0.0023 28.4 4.8 37 6-42 2-41 (273)
424 3hly_A Flavodoxin-like domain; 27.6 80 0.0027 25.1 4.9 36 7-42 1-37 (161)
425 2gas_A Isoflavone reductase; N 27.6 53 0.0018 29.2 4.2 34 6-43 2-35 (307)
426 2an1_A Putative kinase; struct 27.5 55 0.0019 29.2 4.3 36 6-41 5-41 (292)
427 3trh_A Phosphoribosylaminoimid 27.5 2.5E+02 0.0084 22.7 11.6 139 267-432 6-157 (169)
428 2vvr_A Ribose-5-phosphate isom 27.5 68 0.0023 25.5 4.2 35 6-42 1-35 (149)
429 3c7a_A Octopine dehydrogenase; 27.5 21 0.00072 33.7 1.5 31 6-41 2-33 (404)
430 1efv_B Electron transfer flavo 27.3 68 0.0023 28.1 4.7 41 99-141 106-152 (255)
431 3ioy_A Short-chain dehydrogena 27.3 83 0.0028 28.4 5.5 32 8-42 9-40 (319)
432 1pno_A NAD(P) transhydrogenase 27.3 62 0.0021 26.1 3.9 37 8-44 25-64 (180)
433 3c1a_A Putative oxidoreductase 27.2 3.3E+02 0.011 24.1 9.7 105 267-394 11-125 (315)
434 1fjh_A 3alpha-hydroxysteroid d 27.2 73 0.0025 27.4 5.0 33 7-42 1-33 (257)
435 1efp_B ETF, protein (electron 27.1 68 0.0023 28.1 4.6 41 99-141 103-149 (252)
436 1vco_A CTP synthetase; tetrame 27.1 56 0.0019 32.3 4.5 40 4-43 9-51 (550)
437 2xdq_B Light-independent proto 27.1 36 0.0012 33.4 3.2 35 100-139 363-397 (511)
438 3nrc_A Enoyl-[acyl-carrier-pro 27.1 76 0.0026 27.9 5.1 34 8-44 27-62 (280)
439 1z2n_X Inositol 1,3,4-trisphos 27.1 3.4 0.00012 37.9 -4.1 38 1-42 6-45 (324)
440 3lzw_A Ferredoxin--NADP reduct 27.0 17 0.00057 32.9 0.7 34 5-43 6-39 (332)
441 2bon_A Lipid kinase; DAG kinas 27.0 1.8E+02 0.0063 26.3 7.9 82 266-374 30-119 (332)
442 2izz_A Pyrroline-5-carboxylate 27.0 22 0.00076 32.4 1.5 34 4-42 20-57 (322)
443 3dqp_A Oxidoreductase YLBE; al 26.9 38 0.0013 28.5 2.9 32 7-42 1-32 (219)
444 1u0t_A Inorganic polyphosphate 26.8 26 0.00088 31.8 1.9 32 340-373 72-107 (307)
445 1d4o_A NADP(H) transhydrogenas 26.7 64 0.0022 26.1 3.9 37 8-44 24-63 (184)
446 3kl4_A SRP54, signal recogniti 26.6 1E+02 0.0034 29.5 6.1 38 8-45 99-136 (433)
447 3va7_A KLLA0E08119P; carboxyla 26.6 1.8E+02 0.0061 32.1 8.6 36 4-44 28-64 (1236)
448 3aek_B Light-independent proto 26.5 38 0.0013 33.4 3.2 34 100-138 340-373 (525)
449 3ia7_A CALG4; glycosysltransfe 26.5 1.4E+02 0.0047 27.4 7.2 27 343-371 102-130 (402)
450 3eme_A Rhodanese-like domain p 26.5 95 0.0033 22.3 4.8 32 7-42 57-88 (103)
451 1li5_A Cysrs, cysteinyl-tRNA s 26.4 45 0.0015 32.2 3.7 33 10-42 25-66 (461)
452 1f4p_A Flavodoxin; electron tr 26.4 60 0.002 25.2 3.9 36 7-42 1-37 (147)
453 3uug_A Multiple sugar-binding 26.4 3.3E+02 0.011 23.9 12.3 85 6-141 3-93 (330)
454 3hdg_A Uncharacterized protein 26.4 1.2E+02 0.0041 22.6 5.7 48 364-413 78-125 (137)
455 4fb5_A Probable oxidoreductase 26.4 85 0.0029 29.0 5.6 41 2-42 21-64 (393)
456 3lf2_A Short chain oxidoreduct 26.4 75 0.0026 27.6 4.9 33 7-42 8-40 (265)
457 1x0v_A GPD-C, GPDH-C, glycerol 26.2 19 0.00066 33.2 0.9 35 4-43 6-47 (354)
458 1yt5_A Inorganic polyphosphate 26.2 24 0.00082 31.1 1.5 52 343-412 41-95 (258)
459 2pd4_A Enoyl-[acyl-carrier-pro 26.2 65 0.0022 28.2 4.5 40 1-43 1-41 (275)
460 1zmt_A Haloalcohol dehalogenas 26.2 59 0.002 28.1 4.1 33 7-42 1-33 (254)
461 2iz1_A 6-phosphogluconate dehy 26.1 34 0.0012 33.2 2.8 33 5-42 4-36 (474)
462 2x4g_A Nucleoside-diphosphate- 26.1 90 0.0031 28.1 5.6 34 5-42 12-45 (342)
463 1fy2_A Aspartyl dipeptidase; s 26.1 1.7E+02 0.0057 25.0 7.0 46 254-301 21-66 (229)
464 2q5c_A NTRC family transcripti 26.0 45 0.0015 27.9 3.1 31 343-376 51-81 (196)
465 2wsb_A Galactitol dehydrogenas 25.9 84 0.0029 26.9 5.2 32 8-42 12-43 (254)
466 3r5x_A D-alanine--D-alanine li 25.9 37 0.0012 30.5 2.8 44 6-49 3-50 (307)
467 2vvp_A Ribose-5-phosphate isom 25.8 27 0.00094 28.2 1.6 34 5-42 2-37 (162)
468 2b9w_A Putative aminooxidase; 25.8 40 0.0014 31.8 3.2 37 1-42 1-38 (424)
469 2g5c_A Prephenate dehydrogenas 25.7 42 0.0015 29.6 3.2 32 6-42 1-34 (281)
470 2woo_A ATPase GET3; tail-ancho 25.7 78 0.0027 28.8 5.0 45 7-52 19-64 (329)
471 2glx_A 1,5-anhydro-D-fructose 25.7 3.1E+02 0.011 24.4 9.3 61 335-395 52-119 (332)
472 3ce9_A Glycerol dehydrogenase; 25.6 2E+02 0.0067 26.4 7.9 35 110-144 87-124 (354)
473 3l6u_A ABC-type sugar transpor 25.6 3.2E+02 0.011 23.5 11.1 39 4-42 6-46 (293)
474 4e5s_A MCCFLIKE protein (BA_56 25.6 96 0.0033 28.3 5.6 72 281-373 63-136 (331)
475 1sb8_A WBPP; epimerase, 4-epim 25.5 63 0.0021 29.5 4.4 35 4-42 25-59 (352)
476 3lou_A Formyltetrahydrofolate 25.4 2.1E+02 0.0073 25.5 7.7 115 286-426 161-277 (292)
477 2hy6_A General control protein 25.4 97 0.0033 17.4 4.4 28 401-430 4-32 (34)
478 3rkr_A Short chain oxidoreduct 25.4 85 0.0029 27.2 5.1 32 8-42 30-61 (262)
479 3u3x_A Oxidoreductase; structu 25.4 3.9E+02 0.013 24.3 10.7 109 267-395 27-145 (361)
480 3gl9_A Response regulator; bet 25.4 83 0.0028 23.1 4.4 46 365-412 76-121 (122)
481 2fzv_A Putative arsenical resi 25.3 81 0.0028 28.0 4.8 38 5-42 57-97 (279)
482 1rcu_A Conserved hypothetical 25.2 97 0.0033 25.8 5.0 38 4-41 21-65 (195)
483 4fu0_A D-alanine--D-alanine li 25.2 47 0.0016 30.7 3.5 37 5-41 2-42 (357)
484 4hn9_A Iron complex transport 25.1 59 0.002 29.6 4.1 38 100-140 108-145 (335)
485 4g9b_A Beta-PGM, beta-phosphog 25.1 3.1E+02 0.01 23.0 9.4 93 23-140 100-194 (243)
486 3vtf_A UDP-glucose 6-dehydroge 25.0 39 0.0013 32.4 2.9 33 4-41 19-51 (444)
487 4dmm_A 3-oxoacyl-[acyl-carrier 25.0 1.1E+02 0.0038 26.7 5.8 32 8-42 29-60 (269)
488 3fkq_A NTRC-like two-domain pr 25.0 77 0.0026 29.4 4.9 38 6-43 142-181 (373)
489 2etv_A Iron(III) ABC transport 25.0 71 0.0024 29.3 4.6 39 99-140 87-126 (346)
490 1b93_A Protein (methylglyoxal 24.9 1.1E+02 0.0038 24.3 5.0 98 7-140 12-121 (152)
491 1u7z_A Coenzyme A biosynthesis 24.9 54 0.0019 28.2 3.5 22 23-44 37-58 (226)
492 3p19_A BFPVVD8, putative blue 24.8 67 0.0023 28.1 4.3 33 7-42 16-48 (266)
493 3qvo_A NMRA family protein; st 24.8 63 0.0022 27.5 4.0 33 7-42 23-56 (236)
494 3n0v_A Formyltetrahydrofolate 24.7 2.4E+02 0.0082 25.0 7.9 115 286-426 156-272 (286)
495 3f1l_A Uncharacterized oxidore 24.7 94 0.0032 26.7 5.2 32 8-42 13-44 (252)
496 1vi6_A 30S ribosomal protein S 24.6 72 0.0025 26.9 4.1 33 110-142 114-148 (208)
497 1geg_A Acetoin reductase; SDR 24.6 71 0.0024 27.6 4.4 33 7-42 2-34 (256)
498 2fsv_C NAD(P) transhydrogenase 24.6 72 0.0025 26.4 3.9 37 8-44 48-87 (203)
499 2bi7_A UDP-galactopyranose mut 24.6 87 0.003 29.2 5.3 32 6-42 3-34 (384)
500 3gg2_A Sugar dehydrogenase, UD 24.5 42 0.0014 32.3 3.0 31 7-42 3-33 (450)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=9.7e-66 Score=506.76 Aligned_cols=426 Identities=26% Similarity=0.452 Sum_probs=340.9
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
|+..++.||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+..+.. .++++|..+|++++++
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~------~~~i~~~~ipdglp~~ 81 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEF------LPNIKYYNVHDGLPKG 81 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCC------CTTEEEEECCCCCCTT
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccC------CCCceEEecCCCCCCC
Confidence 3444568999999999999999999999999999 9999999976666664432110 2469999999998876
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcC----CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDS----KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
.... .+....+..+...+.+.+++.++++ ..++|+||+|.++.|+..+|+++|||++.++++++.....+.+++.
T Consensus 82 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~ 160 (454)
T 3hbf_A 82 YVSS-GNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDL 160 (454)
T ss_dssp CCCC-SCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cccc-CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHH
Confidence 4322 2333334444433344445544443 3589999999999999999999999999999999888777665443
Q ss_pred cccC---------C---CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC
Q 012587 155 IIDA---------G---ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS 222 (460)
Q Consensus 155 ~~~~---------~---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~ 222 (460)
.... . .+|....++.++++..+.. +....+...+.+......+++.+++|++++||++.++.+++ .
T Consensus 161 ~~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~-~ 238 (454)
T 3hbf_A 161 IREKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS-K 238 (454)
T ss_dssp HHHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT-T
T ss_pred HHhhcCCCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh-c
Confidence 2111 0 1222123666777766543 44455666677777777889999999999999999999998 8
Q ss_pred CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEE
Q 012587 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWV 302 (460)
Q Consensus 223 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 302 (460)
+|++++|||+........ ...++++.+||+.++++++|||||||+...+.+++..++.+++..+++|||+
T Consensus 239 ~~~v~~vGPl~~~~~~~~----------~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~ 308 (454)
T 3hbf_A 239 FKLLLNVGPFNLTTPQRK----------VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWS 308 (454)
T ss_dssp SSCEEECCCHHHHSCCSC----------CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCCEEEECCccccccccc----------ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEE
Confidence 899999999986543211 1235678999998888999999999999888999999999999999999999
Q ss_pred EccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHH
Q 012587 303 IRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSR 382 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~ 382 (460)
++++. ...+|+++.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+
T Consensus 309 ~~~~~------~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~ 382 (454)
T 3hbf_A 309 FRGDP------KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTI 382 (454)
T ss_dssp CCSCH------HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred eCCcc------hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHH
Confidence 96431 124778888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhceeeeec-CCcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 383 FVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 383 ~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
++++.+|+|+.+. +.+++++|+++|+++|++ ++.+||+||+++++++++++.+||+|.+++++|++.+.
T Consensus 383 ~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 383 LTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9963369999998 589999999999999985 34489999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2e-62 Score=492.95 Aligned_cols=443 Identities=35% Similarity=0.702 Sum_probs=329.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhcccc-ccccccCCCCceEEecCCCCCCCC--C
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSD-AFSRYMQIPGFQFKTLTDGLPRDH--P 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~ 80 (460)
++++||+++|+|++||++|++.||++|++|||+|||++++.+.+.+.+.... .... .++++|..+++++++.. .
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~---~~~i~~~~l~~~lp~~~~~~ 82 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDG---FTDFNFESIPDGLTPMEGDG 82 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC---------------CEEEEEECCCCC------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccC---CCceEEEECCCCCCCccccc
Confidence 4567999999999999999999999999999999999998776666443110 0000 13699999987776521 1
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcC-C----CCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDS-K----SPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~----~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
....++..++..+...+.+.++++++++ . .++|+||+|.++.|+..+|+++|||+|.++++++.......+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 83 DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp ---CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 1234555566666566788888888865 1 4899999999999999999999999999999988766554444433
Q ss_pred ccCCCCCCCC--------------C------ccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHH
Q 012587 156 IDAGELPIKG--------------F------LRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPIL 215 (460)
Q Consensus 156 ~~~~~~p~~~--------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~ 215 (460)
...++.|... + ++..+++.++..........+.+.+......+++.+++|++++||++.+
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~ 242 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVI 242 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHH
T ss_pred HhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHH
Confidence 2233322210 0 1112222222211122334444444455567788999999999999999
Q ss_pred HHHhhcCCCceeEeCccccc-cccCCCccc-cCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHh
Q 012587 216 SQIRNHSCPNIYSIGPLNAH-LKVRIPEKT-YSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLV 293 (460)
Q Consensus 216 ~~~~~~~~~~~~~vG~~~~~-~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~ 293 (460)
+.+++ .++++++|||+... ......+.. .....+|+.+.++.+|++.++++++|||||||+...+.+.+..++.+++
T Consensus 243 ~~~~~-~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 243 NALSS-TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHHHT-TCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHH-hCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 99998 77999999999763 111000000 0000223345568999998778999999999998888888999999999
Q ss_pred hCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccc
Q 012587 294 HSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS 373 (460)
Q Consensus 294 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~ 373 (460)
..+++|||+++.+... +....+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|+
T Consensus 322 ~~~~~~l~~~~~~~~~--~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~ 399 (482)
T 2pq6_A 322 NCKKSFLWIIRPDLVI--GGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPF 399 (482)
T ss_dssp HTTCEEEEECCGGGST--TTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred hcCCcEEEEEcCCccc--cccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCc
Confidence 9999999999753222 11123778888788899999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 374 FADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 374 ~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
..||+.||+++++++|+|+.+.+++++++|.++|+++|+| ++.+||+||+++++.+++++.+||++.+++++|++.+..
T Consensus 400 ~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 400 FADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp STTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 9999999999954689999997679999999999999986 112799999999999999999999999999999998743
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.5e-59 Score=467.85 Aligned_cols=434 Identities=29% Similarity=0.466 Sum_probs=315.8
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccc--hhHHhhccccccccccCCCCceEEecCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHY--YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (460)
|+.++++||+++|+|++||++|+++||++|++| ||+|||++++.+ ...+.+... . . ..+++|..++....+
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~-~--~---~~~i~~~~l~~~~~~ 74 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD-S--L---PSSISSVFLPPVDLT 74 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----C---CTTEEEEECCCCCCT
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc-c--c---CCCceEEEcCCCCCC
Confidence 777777899999999999999999999999998 999999998663 333332100 0 0 135899999864322
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcC--CCCc-cEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDS--KSPV-NCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~p-D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
.. ....+....+......+.+.++++++++ ..++ |+||+|.++.|+..+|+++|||++.+++++......+.+++.
T Consensus 75 ~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 153 (480)
T 2vch_A 75 DL-SSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPK 153 (480)
T ss_dssp TS-CTTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHH
T ss_pred CC-CCchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHH
Confidence 11 1122343434344455677888888764 2477 999999998899999999999999999998776554433331
Q ss_pred cccC-----------CCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhc--
Q 012587 155 IIDA-----------GELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNH-- 221 (460)
Q Consensus 155 ~~~~-----------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~-- 221 (460)
.... ...|...-++..+++..+. .+.......+........+...+++|++++||++.+..+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~ 231 (480)
T 2vch_A 154 LDETVSCEFRELTEPLMLPGCVPVAGKDFLDPAQ--DRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGL 231 (480)
T ss_dssp HHHHCCSCGGGCSSCBCCTTCCCBCGGGSCGGGS--CTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCT
T ss_pred HHhcCCCcccccCCcccCCCCCCCChHHCchhhh--cCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhccc
Confidence 1100 0011100122223332221 112234444444445556778899999999999877766530
Q ss_pred CCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEE
Q 012587 222 SCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLW 301 (460)
Q Consensus 222 ~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 301 (460)
.++++++|||+....... ..+..+.++.+||+.++++++|||||||+...+.+++..++.+++..+++|||
T Consensus 232 ~~~~v~~vGpl~~~~~~~---------~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw 302 (480)
T 2vch_A 232 DKPPVYPVGPLVNIGKQE---------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLW 302 (480)
T ss_dssp TCCCEEECCCCCCCSCSC---------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcEEEEeccccccccc---------cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 257899999998643210 00123567899999877899999999999988889999999999999999999
Q ss_pred EEccCCCCC----------CCCCCCCchHHHHHhcCCceeee-ecChHhhhcccccccccccCChhHHHHHHHhCCceec
Q 012587 302 VIRPDLISG----------KDGENQIPEELLEATKERGCIAG-WVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMIC 370 (460)
Q Consensus 302 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~n~~~~~-~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~ 370 (460)
+++.....| ......+|+++.++..++.+++. |+||.+||+|+++++||||||+||++||+++|||||+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~ 382 (480)
T 2vch_A 303 VIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIA 382 (480)
T ss_dssp EECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred EECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEe
Confidence 997642110 00012467777766666656665 9999999999999999999999999999999999999
Q ss_pred ccccccchhhHHHHHhhhceeeeec-C---CcchHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHH
Q 012587 371 WPSFADQQINSRFVGEVWKLGLDIK-D---LCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDR 445 (460)
Q Consensus 371 ~P~~~DQ~~na~~~~e~~G~g~~~~-~---~~~~~~l~~~i~~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 445 (460)
+|++.||+.||+++++++|+|+.+. . .+++++|+++|+++|+ +++++||+||+++++++++++.+||++..++++
T Consensus 383 ~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~ 462 (480)
T 2vch_A 383 WPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSL 462 (480)
T ss_dssp CCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred ccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 9999999999999755899999997 3 6899999999999998 112899999999999999988899999999999
Q ss_pred HHHHHHh
Q 012587 446 LVNDIKM 452 (460)
Q Consensus 446 ~~~~l~~ 452 (460)
|++.+..
T Consensus 463 ~v~~~~~ 469 (480)
T 2vch_A 463 VALKWKA 469 (480)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999865
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.2e-59 Score=466.27 Aligned_cols=427 Identities=26% Similarity=0.474 Sum_probs=313.5
Q ss_pred CCC-CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCe--EEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC
Q 012587 1 MEK-QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIK--ITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (460)
Q Consensus 1 ~~~-~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (460)
|++ ++++||+++|+|++||++|++.||+.|++|||+ |||++++.+.+.+.+..... . ..+++|..+++++++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~--~---~~~i~~~~i~~glp~ 75 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHT--M---QCNIKSYDISDGVPE 75 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC------------CTTEEEEECCCCCCT
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccccc--C---CCceEEEeCCCCCCC
Confidence 443 456799999999999999999999999999765 57788865555443321100 0 136999999887776
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcC----CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDS----KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIP 153 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 153 (460)
... ........+..+...+...++++++++ +.+||+||+|.++.|+..+|+++|||+|.++++++.......+.+
T Consensus 76 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 76 GYV-FAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp TCC-CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred ccc-ccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 532 112233333333333334444444432 248999999999999999999999999999998776544332211
Q ss_pred ccc---c--------C---CCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHh
Q 012587 154 DII---D--------A---GELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIR 219 (460)
Q Consensus 154 ~~~---~--------~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~ 219 (460)
... . . ...|....++.++++..+........+...+.+......+++.+++|++++||++.++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~ 234 (456)
T 2c1x_A 155 EIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLK 234 (456)
T ss_dssp HHHHHHCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred HHHhccCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHH
Confidence 100 0 0 0111111134444443322222222333333434344567889999999999999888888
Q ss_pred hcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcE
Q 012587 220 NHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSF 299 (460)
Q Consensus 220 ~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 299 (460)
+ .+|++++|||+....... . +..+.++.+|++.++++++|||||||....+.+++..++.+++..+++|
T Consensus 235 ~-~~~~~~~vGpl~~~~~~~---------~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~ 303 (456)
T 2c1x_A 235 S-KLKTYLNIGPFNLITPPP---------V-VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPF 303 (456)
T ss_dssp H-HSSCEEECCCHHHHC-------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCE
T ss_pred h-cCCCEEEecCcccCcccc---------c-ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeE
Confidence 8 778999999997643211 0 1224468899998778999999999999888888999999999999999
Q ss_pred EEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchh
Q 012587 300 LWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 300 i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
||+++.+. ...+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.
T Consensus 304 lw~~~~~~------~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~ 377 (456)
T 2c1x_A 304 IWSLRDKA------RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRL 377 (456)
T ss_dssp EEECCGGG------GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred EEEECCcc------hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHH
Confidence 99996431 124677777777889999999999999999998899999999999999999999999999999999
Q ss_pred hHHHHHhhh-ceeeeec-CCcchHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 380 NSRFVGEVW-KLGLDIK-DLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 380 na~~~~e~~-G~g~~~~-~~~~~~~l~~~i~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
||++++ +. |+|+.+. +.+++++|+++|+++|+| ++++||+||+++++.+++++.+||+|.+++++||+.+.
T Consensus 378 Na~~l~-~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~ 451 (456)
T 2c1x_A 378 NGRMVE-DVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVS 451 (456)
T ss_dssp HHHHHH-HTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHH-HHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 999996 55 9999997 679999999999999986 12389999999999999999999999999999999884
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=5.8e-57 Score=450.06 Aligned_cols=421 Identities=28% Similarity=0.486 Sum_probs=315.6
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccch-----hHHhhccccccccccCCCCceEEecCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYY-----DRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (460)
+++||+++|+|++||++|++.||+.|++| ||+|||++++.+. ..+.+... . .++++|..+|++..+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~----~---~~~i~~~~lp~~~~~ 80 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLA----S---QPQIQLIDLPEVEPP 80 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHC----S---CTTEEEEECCCCCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhccc----C---CCCceEEECCCCCCC
Confidence 45799999999999999999999999999 9999999987653 12221000 0 246999999875211
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
.. +...+....+......+.+.++++++++ ..+||+||+|.++.|+..+|+++|||++.+++++......+.+++...
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 81 PQ-ELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp CG-GGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred cc-cccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 11 0011111113333445777888888773 238999999999889999999999999999998887766554444221
Q ss_pred cC------------CCCCCC-CCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC-
Q 012587 157 DA------------GELPIK-GFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS- 222 (460)
Q Consensus 157 ~~------------~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~- 222 (460)
.. ...|.. ..++..+++..+.. + ......+........+++.+++|++++||++..+.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~--~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~ 236 (463)
T 2acv_A 160 IEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFN--K-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDE 236 (463)
T ss_dssp TTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHC--T-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCT
T ss_pred ccCCCCCccccCceeECCCCCCCCChHHCchhhcC--C-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccc
Confidence 00 001110 01122222222211 1 2244444444555677888999999999998877766512
Q ss_pred -CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcc-cCCHHHHHHHHHHHhhCCCcEE
Q 012587 223 -CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVHSKKSFL 300 (460)
Q Consensus 223 -~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i 300 (460)
.+++++|||+.......... ..+..+.++.+|++.++++++|||||||+. ..+.+++..++.+++..+++||
T Consensus 237 p~~~v~~vGpl~~~~~~~~~~------~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 237 KIPPIYAVGPLLDLKGQPNPK------LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp TSCCEEECCCCCCSSCCCBTT------BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cCCcEEEeCCCcccccccccc------cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 57899999998643100000 001234678999998778999999999999 7788889999999999999999
Q ss_pred EEEccCCCCCCCCCCCCchHHHHHh--cCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccch
Q 012587 301 WVIRPDLISGKDGENQIPEELLEAT--KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQ 378 (460)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~ 378 (460)
|+++.+ ...+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+
T Consensus 311 ~~~~~~-------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 383 (463)
T 2acv_A 311 WSNSAE-------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQ 383 (463)
T ss_dssp EECCCC-------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred EEECCC-------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhH
Confidence 999632 013667776666 78999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhceeeee-c----C--CcchHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 379 INSRFVGEVWKLGLDI-K----D--LCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 379 ~na~~~~e~~G~g~~~-~----~--~~~~~~l~~~i~~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
.||+++++++|+|+.+ . + .+++++|.++|+++|+ + ++||+||+++++.+++++.+||++.+++++||+.+
T Consensus 384 ~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 461 (463)
T 2acv_A 384 LNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461 (463)
T ss_dssp HHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 9999953589999999 2 3 6899999999999997 4 78999999999999999999999999999999998
Q ss_pred H
Q 012587 451 K 451 (460)
Q Consensus 451 ~ 451 (460)
.
T Consensus 462 ~ 462 (463)
T 2acv_A 462 T 462 (463)
T ss_dssp H
T ss_pred c
Confidence 5
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.1e-45 Score=362.02 Aligned_cols=388 Identities=17% Similarity=0.216 Sum_probs=263.9
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC-
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR- 81 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (460)
+|+||||+|+++|++||++|+++||++|+++||+|+|++++.+.+.+... +++|..++..++.....
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~ 76 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA------------GATPVVYDSILPKESNPE 76 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------TCEEEECCCCSCCTTCTT
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC------------CCEEEecCccccccccch
Confidence 36789999999999999999999999999999999999997776665543 37888887654432111
Q ss_pred --CCCChHHHHHHHHh---hCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcc---
Q 012587 82 --TPDKFPELVDSLNC---ATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIP--- 153 (460)
Q Consensus 82 --~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~--- 153 (460)
...+....+..+.. ...+.+.+++++. +||+||+|.++.++..+|+.+|||++.+++.+.........++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 154 (424)
T 2iya_A 77 ESWPEDQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQ 154 (424)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGS
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccccc
Confidence 12233333322222 2334455555554 9999999998889999999999999999877541110000000
Q ss_pred -ccccCCC---CCCCCCccCCCCCCcccCCCCCChHHHHHHHHhh----------hhcCCCEEEEcChhhhchhHHHHHh
Q 012587 154 -DIIDAGE---LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETR----------LSAHADGLILNTFEDLEGPILSQIR 219 (460)
Q Consensus 154 -~~~~~~~---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~le~p~~~~~~ 219 (460)
.....+. .|.. ..+...............+.+..... ....++.++++++++|+++. +
T Consensus 155 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~ 226 (424)
T 2iya_A 155 DPTADRGEEAAAPAG----TGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG----D 226 (424)
T ss_dssp CCCC-------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----G
T ss_pred ccccccccccccccc----cccchhhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----c
Confidence 0000000 0000 00000000000000000011111111 11146678999999888752 2
Q ss_pred hcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcE
Q 012587 220 NHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSF 299 (460)
Q Consensus 220 ~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~ 299 (460)
. ..+++++|||+..... +..+|++.++++++|||++||......+.+..++++++..+.++
T Consensus 227 ~-~~~~~~~vGp~~~~~~------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~ 287 (424)
T 2iya_A 227 T-VGDNYTFVGPTYGDRS------------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHV 287 (424)
T ss_dssp G-CCTTEEECCCCCCCCG------------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEE
T ss_pred C-CCCCEEEeCCCCCCcc------------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEE
Confidence 2 4468999999764211 12247765567899999999998666788889999999888899
Q ss_pred EEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchh
Q 012587 300 LWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 300 i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
+|.++.+. . .+.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.
T Consensus 288 ~~~~g~~~--------~-~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~ 355 (424)
T 2iya_A 288 VLSVGRFV--------D-PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTM 355 (424)
T ss_dssp EEECCTTS--------C-GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHH
T ss_pred EEEECCcC--------C-hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHH
Confidence 88875321 0 1111 114679999999999999999997 9999999999999999999999999999999
Q ss_pred hHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 380 NSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 380 na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
||++++ +.|+|+.+. ++++.++|.++|+++|+| ++++++++++++++++. +. ...+.+.|+.+.
T Consensus 356 na~~l~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~----~~-~~~~~~~i~~~~ 420 (424)
T 2iya_A 356 NAERIV-ELGLGRHIPRDQVTAEKLREAVLAVASD--PGVAERLAAVRQEIREA----GG-ARAAADILEGIL 420 (424)
T ss_dssp HHHHHH-HTTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS----CH-HHHHHHHHHHHH
T ss_pred HHHHHH-HCCCEEEcCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc----Cc-HHHHHHHHHHHH
Confidence 999994 789999997 678999999999999998 89999999999998873 33 333445555543
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.1e-44 Score=356.95 Aligned_cols=355 Identities=12% Similarity=0.148 Sum_probs=229.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC------C
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR------D 78 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 78 (460)
+.|||+|+++|++||++|+++||++|++|||+|||++++.+.+ +.+. ++.+..+...... .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~-~~~~------------g~~~~~~~~~~~~~~~~~~~ 87 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA-VAEA------------GLCAVDVSPGVNYAKLFVPD 87 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH-HHTT------------TCEEEESSTTCCSHHHHSCC
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh-HHhc------------CCeeEecCCchhHhhhcccc
Confidence 4589999999999999999999999999999999999866544 4333 2444444322111 0
Q ss_pred ---C---CC-CCCCh---HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHH
Q 012587 79 ---H---PR-TPDKF---PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWS 148 (460)
Q Consensus 79 ---~---~~-~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 148 (460)
. .. ..... ...+..........+.++++++ +||+||+|.++.++..+|+.+|||++.+...+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 88 DTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccc
Confidence 0 00 00111 1112222222344556667776 99999999999999999999999999987654332111
Q ss_pred HhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhh-hcC-CCEEEEcChhhhchhHHHHHhh--cCCC
Q 012587 149 FHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRL-SAH-ADGLILNTFEDLEGPILSQIRN--HSCP 224 (460)
Q Consensus 149 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~l~~~~~~le~p~~~~~~~--~~~~ 224 (460)
...... . ........... ... ....+....+. .....+ ...+
T Consensus 166 ~~~~~~----------------------------~-~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 211 (400)
T 4amg_A 166 LGALIR----------------------------R-AMSKDYERHGVTGEPTGSVRLTTTPPS-----VEALLPEDRRSP 211 (400)
T ss_dssp HHHHHH----------------------------H-HTHHHHHHTTCCCCCSCEEEEECCCHH-----HHHTSCGGGCCT
T ss_pred hhhHHH----------------------------H-HHHHHHHHhCCCcccccchhhcccCch-----hhccCcccccCC
Confidence 110000 0 00000001010 011 11122222111 111111 0112
Q ss_pred ceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCH--HHHHHHHHHHhhCCCcEEEE
Q 012587 225 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR--DQLIEFYYGLVHSKKSFLWV 302 (460)
Q Consensus 225 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~--~~~~~~~~al~~~~~~~i~~ 302 (460)
....+.+.... ....+.+|++..+++++|||||||+...+. ..+..++++++..+.+++|.
T Consensus 212 ~~~~~~~~~~~-----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~ 274 (400)
T 4amg_A 212 GAWPMRYVPYN-----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLT 274 (400)
T ss_dssp TCEECCCCCCC-----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEE
T ss_pred cccCccccccc-----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEE
Confidence 22323222211 122244688878899999999999875443 56788899999999999998
Q ss_pred EccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHH
Q 012587 303 IRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSR 382 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~ 382 (460)
.++.... .... .++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..||+.||+
T Consensus 275 ~~~~~~~------~~~~-----~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~ 341 (400)
T 4amg_A 275 LGGGDLA------LLGE-----LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRD 341 (400)
T ss_dssp CCTTCCC------CCCC-----CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHH
T ss_pred ecCcccc------cccc-----CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHH
Confidence 8643211 1111 5679999999999999999997 9999999999999999999999999999999999
Q ss_pred HHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 383 FVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 383 ~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
++ +++|+|+.++ .+.++ ++|+++|+| ++||+||+++++++++. .+ -..+.+.+|.|
T Consensus 342 ~v-~~~G~g~~l~~~~~~~----~al~~lL~d--~~~r~~a~~l~~~~~~~---~~--~~~~a~~le~l 398 (400)
T 4amg_A 342 VL-TGLGIGFDAEAGSLGA----EQCRRLLDD--AGLREAALRVRQEMSEM---PP--PAETAAXLVAL 398 (400)
T ss_dssp HH-HHHTSEEECCTTTCSH----HHHHHHHHC--HHHHHHHHHHHHHHHTS---CC--HHHHHHHHHHH
T ss_pred HH-HHCCCEEEcCCCCchH----HHHHHHHcC--HHHHHHHHHHHHHHHcC---CC--HHHHHHHHHHh
Confidence 99 4789999997 45554 467789999 99999999999999975 33 23445666655
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2.7e-42 Score=341.33 Aligned_cols=382 Identities=14% Similarity=0.128 Sum_probs=251.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
|||+|++.|+.||++|+++||++|++|||+|+|++++.+.+.+.+. +++|..++..............
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------------g~~~~~i~~~~~~~~~~~~~~~ 68 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV------------GVPHVPVGPSARAPIQRAKPLT 68 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCCEEECCC-------CCSCCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc------------CCeeeeCCCCHHHHhhcccccc
Confidence 6999999999999999999999999999999999997755444432 3777777754321110011111
Q ss_pred HHHHHHHHh-hCcHHHHHHHHcCCCCccEEEEcC-Ccch--HHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCCC
Q 012587 87 PELVDSLNC-ATPPLLKEMVSDSKSPVNCIITDG-YMSR--AIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP 162 (460)
Q Consensus 87 ~~~~~~~~~-~~~~~l~~~~~~~~~~pD~vv~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (460)
...+..+.. .....++++.+. ..+||+||+|. +..+ +..+|+++|||+|.+.+++...... ++|.... + .+
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~--~~p~~~~-~-~~ 143 (415)
T 1iir_A 69 AEDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPSP--YYPPPPL-G-EP 143 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCCS--SSCCCC------
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCCc--ccCCccC-C-cc
Confidence 112222211 112334444431 24999999997 5668 8999999999999998876432110 1111000 0 00
Q ss_pred CCCCccCCCCCCcccCCCC----CChHHHHHHHHhhh---------hcCCCEEEEcChhhhch-hHHHHHhhcCCCceeE
Q 012587 163 IKGFLRCRDLPSFCRVNDP----MDPHLLLFARETRL---------SAHADGLILNTFEDLEG-PILSQIRNHSCPNIYS 228 (460)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---------~~~~~~~l~~~~~~le~-p~~~~~~~~~~~~~~~ 228 (460)
... .+..+.......... .............. .... ..++++++.|++ + ++ .+ ++++
T Consensus 144 ~~~-~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~~-~~-~~~~ 214 (415)
T 1iir_A 144 STQ-DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----PT-DL-DAVQ 214 (415)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----CC-SS-CCEE
T ss_pred ccc-hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----cc-cC-CeEe
Confidence 000 000000000000000 00000000100000 0112 578899888887 4 33 44 8999
Q ss_pred eCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCC
Q 012587 229 IGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLI 308 (460)
Q Consensus 229 vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 308 (460)
|||+...... ..+.++.+|++. ++++|||++||.. .....++.++++++..+.+++|+++.+..
T Consensus 215 vG~~~~~~~~-------------~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~ 278 (415)
T 1iir_A 215 TGAWILPDER-------------PLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADL 278 (415)
T ss_dssp CCCCCCCCCC-------------CCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTC
T ss_pred eCCCccCccc-------------CCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 9999764221 234568899985 4589999999987 56778888999999999999998754311
Q ss_pred CCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhh
Q 012587 309 SGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVW 388 (460)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~ 388 (460)
.. . ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||..||+++ ++.
T Consensus 279 -------~~-~----~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~ 343 (415)
T 1iir_A 279 -------VL-P----DDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRV-AEL 343 (415)
T ss_dssp -------CC-S----SCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHH
T ss_pred -------cc-c----CCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHH-HHC
Confidence 11 1 13468999999999999988887 999999999999999999999999999999999999 588
Q ss_pred ceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 389 KLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 389 G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
|+|+.++ ++++.++|.++|+++ +| +++++++++++++++. ......+.+.++.+..+
T Consensus 344 g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 344 GVGVAHDGPIPTFDSLSAALATA-LT--PETHARATAVAGTIRT-----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp TSEEECSSSSCCHHHHHHHHHHH-TS--HHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHTC
T ss_pred CCcccCCcCCCCHHHHHHHHHHH-cC--HHHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHhc
Confidence 9999997 678999999999999 98 9999999999988764 22345556666666544
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.7e-42 Score=339.15 Aligned_cols=369 Identities=14% Similarity=0.092 Sum_probs=251.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC-CCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR-TPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 85 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. +++|..++......... ....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------------g~~~~~~~~~~~~~~~~~~~~~ 68 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV------------GVPHVPVGLPQHMMLQEGMPPP 68 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------TCCEEECSCCGGGCCCTTSCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------------CCeeeecCCCHHHHHhhccccc
Confidence 6999999999999999999999999999999999997655555443 37777776532111000 0111
Q ss_pred hHHHHHHHHhhC-cHHHHHHHHcCCCCccEEEEcC-Ccch--HHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 86 FPELVDSLNCAT-PPLLKEMVSDSKSPVNCIITDG-YMSR--AIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 86 ~~~~~~~~~~~~-~~~l~~~~~~~~~~pD~vv~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
....+..+.... ...++.+.+. ..+||+||+|. +..+ +..+|+.+|||+|.+.+++..... .+++ +.. + .
T Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~--~~~p-~~~-~-~ 142 (416)
T 1rrv_A 69 PPEEEQRLAAMTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS--PHLP-PAY-D-E 142 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC--SSSC-CCB-C-S
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC--cccC-CCC-C-C
Confidence 111222222111 2222333221 24999999996 3456 899999999999998877533211 0111 000 0 0
Q ss_pred CCCCCccCCCCCCcccCCCCCChHH----------------HHHHHHh---------hhhcCCCEEEEcChhhhchhHHH
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHL----------------LLFARET---------RLSAHADGLILNTFEDLEGPILS 216 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~---------~~~~~~~~~l~~~~~~le~p~~~ 216 (460)
+.. +. ...+... ..+.... ...... .+++++.+.|+++
T Consensus 143 ~~~--------~~-----r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~--- 205 (416)
T 1rrv_A 143 PTT--------PG-----VTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL--- 205 (416)
T ss_dssp CCC--------TT-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC---
T ss_pred CCC--------ch-----HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC---
Confidence 000 00 0000000 0011001 011122 5788988888865
Q ss_pred HHhhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhhC
Q 012587 217 QIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS 295 (460)
Q Consensus 217 ~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~ 295 (460)
++ .+ ++++|||+...... ..+.++.+|++. ++++|||++||... .....+..++++++..
T Consensus 206 --~~-~~-~~~~vG~~~~~~~~-------------~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~ 266 (416)
T 1rrv_A 206 --QP-DV-DAVQTGAWLLSDER-------------PLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQ 266 (416)
T ss_dssp --CS-SC-CCEECCCCCCCCCC-------------CCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHT
T ss_pred --CC-CC-CeeeECCCccCccC-------------CCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHHC
Confidence 33 44 79999999764221 235568899975 45899999999864 3346678899999999
Q ss_pred CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccc
Q 012587 296 KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFA 375 (460)
Q Consensus 296 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~ 375 (460)
+.+++|+++.... .. . ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...
T Consensus 267 ~~~~v~~~g~~~~-------~~-~----~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 332 (416)
T 1rrv_A 267 GRRVILSRGWTEL-------VL-P----DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNT 332 (416)
T ss_dssp TCCEEEECTTTTC-------CC-S----CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSB
T ss_pred CCeEEEEeCCccc-------cc-c----CCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCC
Confidence 9999998864310 11 1 14579999999999999998887 999999999999999999999999999
Q ss_pred cchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHH-HHHHhh
Q 012587 376 DQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLV-NDIKMM 453 (460)
Q Consensus 376 DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~-~~l~~~ 453 (460)
||+.||+++ ++.|+|+.+. ++.+.+.|.++|+++ +| +++++++++++++++. .+.. .+.+.+ +.+..+
T Consensus 333 dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~----~~~~--~~~~~i~e~~~~~ 402 (416)
T 1rrv_A 333 DQPYFAGRV-AALGIGVAHDGPTPTFESLSAALTTV-LA--PETRARAEAVAGMVLT----DGAA--AAADLVLAAVGRE 402 (416)
T ss_dssp THHHHHHHH-HHHTSEEECSSSCCCHHHHHHHHHHH-TS--HHHHHHHHHHTTTCCC----CHHH--HHHHHHHHHHHC-
T ss_pred CcHHHHHHH-HHCCCccCCCCCCCCHHHHHHHHHHh-hC--HHHHHHHHHHHHHHhh----cCcH--HHHHHHHHHHhcc
Confidence 999999999 5789999997 678999999999999 98 9999999999988775 3333 444445 666543
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.8e-40 Score=328.36 Aligned_cols=375 Identities=13% Similarity=0.131 Sum_probs=256.2
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC-
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR- 81 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (460)
..+||||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+.+. ++.+..++..++.....
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~------------G~~~~~~~~~~~~~~~~~ 84 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA------------GATVVPYQSEIIDADAAE 84 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCEEEECCCSTTTCCHHH
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc------------CCEEEeccccccccccch
Confidence 35689999999999999999999999999999999999987776666543 47888887543321100
Q ss_pred --CCCChHHH----HHHHHhhCcHHHHHHHHcCCCCccEEEEc-CCcchHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 82 --TPDKFPEL----VDSLNCATPPLLKEMVSDSKSPVNCIITD-GYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 82 --~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~pD~vv~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
........ +..........+.++++++ +||+||+| ....++..+|+.+|||++.+.+....... +...+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~ 161 (415)
T 3rsc_A 85 VFGSDDLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQD 161 (415)
T ss_dssp HHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHH
T ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-cccccc
Confidence 00011111 1111112335556666666 99999999 77778999999999999998754321100 000000
Q ss_pred cccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHH---Hh-------hhhcC-CCEEEEcChhhhchhHHHHHhhcCC
Q 012587 155 IIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFAR---ET-------RLSAH-ADGLILNTFEDLEGPILSQIRNHSC 223 (460)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~~-~~~~l~~~~~~le~p~~~~~~~~~~ 223 (460)
..+.. ....+.. .......+.. .. ..... .+..+....+.++++ +....
T Consensus 162 ~~~~~---------~~~~p~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~ 221 (415)
T 3rsc_A 162 MVTLA---------GTIDPLD------LPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----GDTFD 221 (415)
T ss_dssp HHHHH---------TCCCGGG------CHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----GGGCC
T ss_pred ccccc---------ccCChhh------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----cccCC
Confidence 00000 0000000 0000011110 00 01111 266676666666654 33123
Q ss_pred CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEE
Q 012587 224 PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVI 303 (460)
Q Consensus 224 ~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~ 303 (460)
.++.++||+..... +..+|....+++++|||++||......+.+..++++++..+.+++|.+
T Consensus 222 ~~~~~vGp~~~~~~------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~ 283 (415)
T 3rsc_A 222 DRFVFVGPCFDDRR------------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTL 283 (415)
T ss_dssp TTEEECCCCCCCCG------------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEEC
T ss_pred CceEEeCCCCCCcc------------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEe
Confidence 56899999875322 122355445578999999999987777888999999999898999887
Q ss_pred ccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHH
Q 012587 304 RPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRF 383 (460)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~ 383 (460)
+.+. ....+. ..++|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|...||..||++
T Consensus 284 g~~~-----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~ 351 (415)
T 3rsc_A 284 GGQV-----DPAALG-----DLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARR 351 (415)
T ss_dssp TTTS-----CGGGGC-----CCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHH
T ss_pred CCCC-----ChHHhc-----CCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHH
Confidence 5321 000111 14679999999999999999998 99999999999999999999999999999999999
Q ss_pred HHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 384 VGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 384 ~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
++ +.|+|+.+. ++++.+.|.++|.++|+| ++++++++++++.+.+ .+....+ .+.++.+
T Consensus 352 l~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~----~~~~~~~-~~~i~~~ 411 (415)
T 3rsc_A 352 VD-QLGLGAVLPGEKADGDTLLAAVGAVAAD--PALLARVEAMRGHVRR----AGGAARA-ADAVEAY 411 (415)
T ss_dssp HH-HHTCEEECCGGGCCHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHH----SCHHHHH-HHHHHHH
T ss_pred HH-HcCCEEEcccCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHh----cCHHHHH-HHHHHHH
Confidence 95 789999997 678999999999999999 9999999999999887 3443444 4444443
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2e-41 Score=333.51 Aligned_cols=369 Identities=14% Similarity=0.115 Sum_probs=245.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC---CCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP---RTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 83 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... +++|..++........ ...
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~------------g~~~~~l~~~~~~~~~~~~~~~ 68 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV------------GVPMVPVGRAVRAGAREPGELP 68 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT------------TCCEEECSSCSSGGGSCTTCCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------------CCceeecCCCHHHHhccccCCH
Confidence 6999999999999999999999999999999999997765555433 3777777643221100 001
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchH---HHHHHHhCCceEEEecchhHHHHHHhhc-cccccCC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRA---IDAAREVGVSIIYFRTISACAFWSFHCI-PDIIDAG 159 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~-~~~~~~~ 159 (460)
......+..........+.+++ .+||+||+|..+..+ ..+|+.+|||++.+..++........+. +......
T Consensus 69 ~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~ 144 (404)
T 3h4t_A 69 PGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQG 144 (404)
T ss_dssp TTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHH
Confidence 1111222222221222222222 379999998665533 7899999999999888765311100000 0000000
Q ss_pred C-CCC----CCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCcccc
Q 012587 160 E-LPI----KGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNA 234 (460)
Q Consensus 160 ~-~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~ 234 (460)
. ... ..+..-..++ .... .... ...+..+.+..+.+.+. ++ ..++++++|++..
T Consensus 145 ~~~~~~~~~~~~~~~lgl~------~~~~-~~~~--------~~~~~~l~~~~~~l~p~-----~~-~~~~~~~~G~~~~ 203 (404)
T 3h4t_A 145 ADRLFGDAVNSHRASIGLP------PVEH-LYDY--------GYTDQPWLAADPVLSPL-----RP-TDLGTVQTGAWIL 203 (404)
T ss_dssp HHHHHHHHHHHHHHHTTCC------CCCC-HHHH--------HHCSSCEECSCTTTSCC-----CT-TCCSCCBCCCCCC
T ss_pred HHHHhHHHHHHHHHHcCCC------CCcc-hhhc--------cccCCeEEeeCcceeCC-----CC-CCCCeEEeCcccc
Confidence 0 000 0000000000 0000 0000 01122344555555543 22 4467889998765
Q ss_pred ccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCC
Q 012587 235 HLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGE 314 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~ 314 (460)
.... ..++++.+|++. ++++|||++||+.. ..+.+..+++++++.+.++||+.+.....
T Consensus 204 ~~~~-------------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~----- 262 (404)
T 3h4t_A 204 PDQR-------------PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLG----- 262 (404)
T ss_dssp CCCC-------------CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCC-----
T ss_pred CCCC-------------CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccc-----
Confidence 4322 235568889874 67899999999986 66788889999999999999988643111
Q ss_pred CCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeee
Q 012587 315 NQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 315 ~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~ 394 (460)
... .++|+.+.+|+||.++|+++++ +|||||.||++||+++|||+|++|...||+.||+++ ++.|+|..+
T Consensus 263 --~~~-----~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~-~~~G~g~~l 332 (404)
T 3h4t_A 263 --RID-----EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRV-ADLGVGVAH 332 (404)
T ss_dssp --CSS-----CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEEC
T ss_pred --ccc-----CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHH-HHCCCEecc
Confidence 111 3579999999999999999997 999999999999999999999999999999999999 589999999
Q ss_pred c-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012587 395 K-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 452 (460)
Q Consensus 395 ~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 452 (460)
. .+++.+.|.++|+++|+ ++|+++++++++.+++ .....+.+.++.+..
T Consensus 333 ~~~~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 333 DGPTPTVESLSAALATALT---PGIRARAAAVAGTIRT------DGTTVAAKLLLEAIS 382 (404)
T ss_dssp SSSSCCHHHHHHHHHHHTS---HHHHHHHHHHHTTCCC------CHHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHh
Confidence 8 67899999999999997 7899999998887653 224455556665544
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=5.7e-40 Score=323.30 Aligned_cols=373 Identities=17% Similarity=0.153 Sum_probs=254.7
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC---
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP--- 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 80 (460)
|.|+||+|++.++.||++|+++|+++|+++||+|+|++++.+.+.+... ++.+..++..++....
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA------------GAEVVLYKSEFDTFHVPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT------------TCEEEECCCGGGTSSSSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc------------CCEEEeccccccccccccc
Confidence 4578999999999999999999999999999999999997766666543 3777777643322110
Q ss_pred CCCCChHHHHHH-HHh---hCcHHHHHHHHcCCCCccEEEEc-CCcchHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 81 RTPDKFPELVDS-LNC---ATPPLLKEMVSDSKSPVNCIITD-GYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 81 ~~~~~~~~~~~~-~~~---~~~~~l~~~~~~~~~~pD~vv~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
....+....+.. +.. .....+.++++++ +||+||+| ....++..+|+.+|||+|.+.+........ ...+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~ 146 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-SLFKEL 146 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-CHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-cccccc
Confidence 112223322222 222 2334556666665 99999999 777789999999999999987543211000 000000
Q ss_pred cc--CCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHh----------hhhcC-CCEEEEcChhhhchhHHHHHhhcC
Q 012587 156 ID--AGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARET----------RLSAH-ADGLILNTFEDLEGPILSQIRNHS 222 (460)
Q Consensus 156 ~~--~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~l~~~~~~le~p~~~~~~~~~ 222 (460)
.+ ....| .. .......+.+.. ..... .+..+....++++++ ....
T Consensus 147 ~~~~~~~~~-----------~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~ 204 (402)
T 3ia7_A 147 WKSNGQRHP-----------AD------VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AETF 204 (402)
T ss_dssp HHHHTCCCG-----------GG------SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GGGC
T ss_pred cccccccCh-----------hh------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cccC
Confidence 00 00000 00 000000111000 00011 255566665666554 3312
Q ss_pred CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEE
Q 012587 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWV 302 (460)
Q Consensus 223 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 302 (460)
..++.++||+...... ..+|+...+++++|||++||......+.+..++++++..+.++++.
T Consensus 205 ~~~~~~vGp~~~~~~~------------------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (402)
T 3ia7_A 205 DERFAFVGPTLTGRDG------------------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMA 266 (402)
T ss_dssp CTTEEECCCCCCC----------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred CCCeEEeCCCCCCccc------------------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 3679999988643221 1235544557899999999998777788999999999988888888
Q ss_pred EccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccc-cccchhhH
Q 012587 303 IRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS-FADQQINS 381 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~-~~DQ~~na 381 (460)
++.+. ..+.+ +..++|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|. ..||..||
T Consensus 267 ~g~~~---------~~~~~-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 267 IGGFL---------DPAVL-GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp CCTTS---------CGGGG-CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred eCCcC---------Chhhh-CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 75321 01111 114679999999999999999998 9999999999999999999999999 99999999
Q ss_pred HHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 382 RFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 382 ~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
+++. +.|+|..+. ++++++.|.+++.++|+| ++++++++++++.+.+ .+..... .+.++++.
T Consensus 335 ~~~~-~~g~g~~~~~~~~~~~~l~~~~~~ll~~--~~~~~~~~~~~~~~~~----~~~~~~~-~~~i~~~~ 397 (402)
T 3ia7_A 335 ERVI-ELGLGSVLRPDQLEPASIREAVERLAAD--SAVRERVRRMQRDILS----SGGPARA-ADEVEAYL 397 (402)
T ss_dssp HHHH-HTTSEEECCGGGCSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHT----SCHHHHH-HHHHHHHH
T ss_pred HHHH-HcCCEEEccCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHhh----CChHHHH-HHHHHHHH
Confidence 9995 789999997 678999999999999999 9999999999999876 3443444 44455443
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=4.2e-40 Score=328.15 Aligned_cols=371 Identities=12% Similarity=0.127 Sum_probs=237.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC-CC---
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR-DH--- 79 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 79 (460)
++||||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.+.+. ++.|..++...+. +.
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~------------G~~~~~i~~~~~~~~~~~~ 85 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA------------GLTAVPVGTDVDLVDFMTH 85 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT------------TCCEEECSCCCCHHHHHHH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC------------CCceeecCCccchHHHhhh
Confidence 5689999999999999999999999999999999999997765444332 4778877754210 00
Q ss_pred -----------CCC----CC--ChH---HHHHHHH---hh------CcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHH
Q 012587 80 -----------PRT----PD--KFP---ELVDSLN---CA------TPPLLKEMVSDSKSPVNCIITDGYMSRAIDAARE 130 (460)
Q Consensus 80 -----------~~~----~~--~~~---~~~~~~~---~~------~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~ 130 (460)
... .. .+. .....+. .. ....+.++++++ +||+||+|..+.++..+|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~ 163 (441)
T 2yjn_A 86 AGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAV 163 (441)
T ss_dssp TTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHH
T ss_pred hhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHH
Confidence 000 10 111 1111121 10 223344455555 99999999987889999999
Q ss_pred hCCceEEEecchhHHHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhc---------CCCE
Q 012587 131 VGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSA---------HADG 201 (460)
Q Consensus 131 lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 201 (460)
+|||+|.+...+.........+... ....+.. .......+.+.+...... ..+.
T Consensus 164 lgiP~v~~~~~~~~~~~~~~~~~~~--~~~~~~~---------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~ 226 (441)
T 2yjn_A 164 TGTPHARLLWGPDITTRARQNFLGL--LPDQPEE---------------HREDPLAEWLTWTLEKYGGPAFDEEVVVGQW 226 (441)
T ss_dssp HTCCEEEECSSCCHHHHHHHHHHHH--GGGSCTT---------------TCCCHHHHHHHHHHHHTTCCCCCGGGTSCSS
T ss_pred cCCCEEEEecCCCcchhhhhhhhhh--ccccccc---------------cccchHHHHHHHHHHHcCCCCCCccccCCCe
Confidence 9999999865543221111000000 0000000 001112222222111110 1223
Q ss_pred EEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccC-
Q 012587 202 LILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM- 280 (460)
Q Consensus 202 ~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~- 280 (460)
.+....+.++++ . .++. ..+++.... .+.++.+|++..+++++|||++||....
T Consensus 227 ~l~~~~~~~~~~-----~--~~~~-~~~~~~~~~-----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 281 (441)
T 2yjn_A 227 TIDPAPAAIRLD-----T--GLKT-VGMRYVDYN-----------------GPSVVPEWLHDEPERRRVCLTLGISSREN 281 (441)
T ss_dssp EEECSCGGGSCC-----C--CCCE-EECCCCCCC-----------------SSCCCCGGGSSCCSSCEEEEEC-------
T ss_pred EEEecCccccCC-----C--CCCC-CceeeeCCC-----------------CCcccchHhhcCCCCCEEEEECCCCcccc
Confidence 444443333321 1 1111 112221110 1123557887556789999999998753
Q ss_pred --CHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHH
Q 012587 281 --SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNST 358 (460)
Q Consensus 281 --~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~ 358 (460)
..+.+..++++++..++++||+.++... ..+.. .++|+.+.+|+||.++|+++++ ||||||.||+
T Consensus 282 ~~~~~~~~~~~~al~~~~~~~v~~~g~~~~------~~l~~-----~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~ 348 (441)
T 2yjn_A 282 SIGQVSIEELLGAVGDVDAEIIATFDAQQL------EGVAN-----IPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSW 348 (441)
T ss_dssp ---CCSTTTTHHHHHTSSSEEEECCCTTTT------SSCSS-----CCSSEEECCSCCHHHHGGGCSE--EEECCCHHHH
T ss_pred cChHHHHHHHHHHHHcCCCEEEEEECCcch------hhhcc-----CCCCEEEecCCCHHHHHhhCCE--EEECCCHHHH
Confidence 2345677889999889999998753211 11211 4579999999999999999997 9999999999
Q ss_pred HHHHHhCCceecccccccchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCC
Q 012587 359 LESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGG 437 (460)
Q Consensus 359 ~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g 437 (460)
+||+++|||+|++|...||..||++++ +.|+|+.+. ++++.+.|.++|.++|+| ++++++++++++.+... .
T Consensus 349 ~Ea~~~G~P~i~~p~~~dQ~~na~~l~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~----~ 421 (441)
T 2yjn_A 349 HTAAIHGVPQVILPDGWDTGVRAQRTQ-EFGAGIALPVPELTPDQLRESVKRVLDD--PAHRAGAARMRDDMLAE----P 421 (441)
T ss_dssp HHHHHTTCCEEECCCSHHHHHHHHHHH-HHTSEEECCTTTCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS----C
T ss_pred HHHHHhCCCEEEeCCcccHHHHHHHHH-HcCCEEEcccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHcC----C
Confidence 999999999999999999999999994 789999997 678999999999999999 99999999999998873 3
Q ss_pred ChHHHHHHHHHHHH
Q 012587 438 SSYCNLDRLVNDIK 451 (460)
Q Consensus 438 ~~~~~~~~~~~~l~ 451 (460)
. ...+.+.++++.
T Consensus 422 ~-~~~~~~~i~~~~ 434 (441)
T 2yjn_A 422 S-PAEVVGICEELA 434 (441)
T ss_dssp C-HHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHH
Confidence 3 344455555544
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.3e-38 Score=312.80 Aligned_cols=364 Identities=17% Similarity=0.189 Sum_probs=244.5
Q ss_pred CCC-CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCC
Q 012587 1 MEK-QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (460)
Q Consensus 1 ~~~-~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (460)
|+. |.||||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.+. ++++..++..++...
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~ 68 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT------------GPRPVLYHSTLPGPD 68 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT------------SCEEEECCCCSCCTT
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC------------CCEEEEcCCcCcccc
Confidence 444 5678999999999999999999999999999999999987765554332 477888775433221
Q ss_pred CC---CCCChHHHHHHHH---hhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHhhcc
Q 012587 80 PR---TPDKFPELVDSLN---CATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIP 153 (460)
Q Consensus 80 ~~---~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 153 (460)
.. ...++...+..+. ......+.+++++. +||+||+|.+..++..+|+.+|||+|.+.+.+.........+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 146 (430)
T 2iyf_A 69 ADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA 146 (430)
T ss_dssp SCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc
Confidence 10 0123322222221 12345556666665 9999999987778999999999999998865431000000000
Q ss_pred ccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHh----------hhhcCCCEEEEcChhhhchhHHHHHhhcCC
Q 012587 154 DIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARET----------RLSAHADGLILNTFEDLEGPILSQIRNHSC 223 (460)
Q Consensus 154 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~le~p~~~~~~~~~~ 223 (460)
.... .+..+.+. .......+.+.. ......+.+++++.+.++++. +. ..
T Consensus 147 ~~~~---------~~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~-~~ 205 (430)
T 2iyf_A 147 EPMW---------REPRQTER-------GRAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHA----DR-VD 205 (430)
T ss_dssp HHHH---------HHHHHSHH-------HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTG----GG-SC
T ss_pred cchh---------hhhccchH-------HHHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCc----cc-CC
Confidence 0000 00000000 000000011100 011245678889888877651 22 34
Q ss_pred Cc-eeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEE
Q 012587 224 PN-IYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLW 301 (460)
Q Consensus 224 ~~-~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~ 301 (460)
++ ++++||....... ..+|.+..+++++||+++||......+.+..++++++.. +.+++|
T Consensus 206 ~~~v~~vG~~~~~~~~------------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~ 267 (430)
T 2iyf_A 206 EDVYTFVGACQGDRAE------------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVL 267 (430)
T ss_dssp TTTEEECCCCC-----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEE
T ss_pred CccEEEeCCcCCCCCC------------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEE
Confidence 57 9999986532110 113554345678999999999855667888899999886 778888
Q ss_pred EEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhH
Q 012587 302 VIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINS 381 (460)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na 381 (460)
.++.+. ..+.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..|+
T Consensus 268 ~~G~~~---------~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a 335 (430)
T 2iyf_A 268 QIGRKV---------TPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNA 335 (430)
T ss_dssp ECC------------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHH
T ss_pred EeCCCC---------ChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHH
Confidence 875321 01111 114579999999999999999997 999999999999999999999999999999999
Q ss_pred HHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 012587 382 RFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKS 432 (460)
Q Consensus 382 ~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~ 432 (460)
+++. +.|+|+.+. ++++.+.|.++|.++|+| +++++++.++++++.+.
T Consensus 336 ~~~~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 336 DMLQ-GLGVARKLATEEATADLLRETALALVDD--PEVARRLRRIQAEMAQE 384 (430)
T ss_dssp HHHH-HTTSEEECCCC-CCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHH
T ss_pred HHHH-HcCCEEEcCCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc
Confidence 9995 789999997 678999999999999998 89999999999988874
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.5e-38 Score=308.77 Aligned_cols=352 Identities=15% Similarity=0.135 Sum_probs=244.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC--------
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD-------- 78 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 78 (460)
|||++++.++.||++|+++|+++|+++||+|+|++++...+.+... ++.+..++.....+
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~~~~~ 68 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV------------GLPAVATTDLPIRHFITTDREG 68 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCCEEESCSSCHHHHHHBCTTS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC------------CCEEEEeCCcchHHHHhhhccc
Confidence 6999999999999999999999999999999999987654444332 36666665432000
Q ss_pred CCCCC-C--ChHHHH-HH----HHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHHHHHh
Q 012587 79 HPRTP-D--KFPELV-DS----LNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFH 150 (460)
Q Consensus 79 ~~~~~-~--~~~~~~-~~----~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 150 (460)
..... . .....+ .. ........+.+++++. +||+||+|.+..++..+|+.+|||+|.+...+...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~----- 141 (384)
T 2p6p_A 69 RPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA----- 141 (384)
T ss_dssp CBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-----
T ss_pred CccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-----
Confidence 00000 1 111111 11 1112234555666665 99999999887788999999999999876432110
Q ss_pred hccccccCCCCCCCCCccCCCCCCcccCCCCCChHHH---HHHHHhhhh--cCCCEEEEcChhhhchhHHHHHhhcCC-C
Q 012587 151 CIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLL---LFARETRLS--AHADGLILNTFEDLEGPILSQIRNHSC-P 224 (460)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~l~~~~~~le~p~~~~~~~~~~-~ 224 (460)
.. . ...... ......... ..++.+++++.+.++++ ++ .. .
T Consensus 142 -------~~---------------~------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~-~~~~ 187 (384)
T 2p6p_A 142 -------DG---------------I------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPA-----NA-APAR 187 (384)
T ss_dssp -------TT---------------T------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----TS-CCCE
T ss_pred -------ch---------------h------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----CC-CCCC
Confidence 00 0 000011 111111110 11567888888777654 11 11 1
Q ss_pred ceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccC-----CHHHHHHHHHHHhhCCCcE
Q 012587 225 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM-----SRDQLIEFYYGLVHSKKSF 299 (460)
Q Consensus 225 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~-----~~~~~~~~~~al~~~~~~~ 299 (460)
++.+++. . . +.++.+|++..+++++|||++||.... +.+.+..+++++++.+.++
T Consensus 188 ~~~~~~~---~-~----------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~ 247 (384)
T 2p6p_A 188 MMRHVAT---S-R----------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVEL 247 (384)
T ss_dssp ECCCCCC---C-C----------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEE
T ss_pred ceEecCC---C-C----------------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEE
Confidence 2333321 0 0 112456887556779999999999864 4467888999999889999
Q ss_pred EEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchh
Q 012587 300 LWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 300 i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
+|+.++. ..+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..
T Consensus 248 ~~~~g~~----------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~ 313 (384)
T 2p6p_A 248 IVAAPDT----------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEA 313 (384)
T ss_dssp EEECCHH----------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHH
T ss_pred EEEeCCC----------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchH
Confidence 9987421 11111 235789999 99999999999987 9999999999999999999999999999999
Q ss_pred hHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 380 NSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 380 na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
||+++ ++.|+|+.+. ++.+.+.|.++|+++|+| +++++++++++++++.. ....++ .+.++.|-.+
T Consensus 314 ~a~~~-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~----~~~~~~-~~~i~~~~~~ 380 (384)
T 2p6p_A 314 PARRV-ADYGAAIALLPGEDSTEAIADSCQELQAK--DTYARRAQDLSREISGM----PLPATV-VTALEQLAHH 380 (384)
T ss_dssp HHHHH-HHHTSEEECCTTCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS----CCHHHH-HHHHHHHHHH
T ss_pred HHHHH-HHCCCeEecCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhC----CCHHHH-HHHHHHHhhh
Confidence 99999 4789999997 578999999999999999 99999999999999874 443444 4555555444
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.2e-37 Score=304.59 Aligned_cols=344 Identities=15% Similarity=0.146 Sum_probs=219.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCC-------
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLP------- 76 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 76 (460)
..+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+... ++.+..++....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~ 80 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA------------GLPFAPTCPSLDMPEVLSW 80 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT------------TCCEEEEESSCCHHHHHSB
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC------------CCeeEecCCccchHhhhhh
Confidence 5678999999999999999999999999999999999986665555443 355555542110
Q ss_pred --CCC-CCCCCChH-------HHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhHHH
Q 012587 77 --RDH-PRTPDKFP-------ELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAF 146 (460)
Q Consensus 77 --~~~-~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 146 (460)
... ........ ..+..........+.++++++ +||+|++|...+++..+|+.+|||+|.+........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~ 158 (398)
T 4fzr_A 81 DREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPE 158 (398)
T ss_dssp CTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCH
T ss_pred hccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCch
Confidence 000 00011111 112222222344567777776 999999998778899999999999998776532111
Q ss_pred HHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhh--hhcCCCEEEEcChhhhchhHHHHHhhcCCC
Q 012587 147 WSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETR--LSAHADGLILNTFEDLEGPILSQIRNHSCP 224 (460)
Q Consensus 147 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~le~p~~~~~~~~~~~ 224 (460)
........ .......... ........+....+.+..+ ......
T Consensus 159 ~~~~~~~~------------------------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 203 (398)
T 4fzr_A 159 LIKSAGVG------------------------------ELAPELAELGLTDFPDPLLSIDVCPPSMEAQ-----PKPGTT 203 (398)
T ss_dssp HHHHHHHH------------------------------HTHHHHHTTTCSSCCCCSEEEECSCGGGC---------CCCE
T ss_pred hhhHHHHH------------------------------HHHHHHHHcCCCCCCCCCeEEEeCChhhCCC-----CCCCCC
Confidence 00000000 0000000000 0011233444443333322 100000
Q ss_pred ceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCC--------HHHHHHHHHHHhhCC
Q 012587 225 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMS--------RDQLIEFYYGLVHSK 296 (460)
Q Consensus 225 ~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~--------~~~~~~~~~al~~~~ 296 (460)
++.++++.. ...++.+|+...+++++|||++||..... ...+..+++++++.+
T Consensus 204 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 264 (398)
T 4fzr_A 204 KMRYVPYNG-------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLG 264 (398)
T ss_dssp ECCCCCCCC-------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGT
T ss_pred CeeeeCCCC-------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCC
Confidence 111221100 11224567765567899999999997432 345788899999899
Q ss_pred CcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceeccccccc
Q 012587 297 KSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFAD 376 (460)
Q Consensus 297 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~D 376 (460)
.+++|+.++.. .+.+ +..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...|
T Consensus 265 ~~~v~~~~~~~----------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~ 331 (398)
T 4fzr_A 265 FEVVVAVSDKL----------AQTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAE 331 (398)
T ss_dssp CEEEECCCC-------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGG
T ss_pred CEEEEEeCCcc----------hhhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchh
Confidence 99988875321 1111 125789999999999999999998 9999999999999999999999999999
Q ss_pred chhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 012587 377 QQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKK 431 (460)
Q Consensus 377 Q~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~ 431 (460)
|..|+.++ ++.|+|+.+. ++++++.|.++|.++|+| +++++++++.++.+.+
T Consensus 332 q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 332 VWDSARLL-HAAGAGVEVPWEQAGVESVLAACARIRDD--SSYVGNARRLAAEMAT 384 (398)
T ss_dssp GHHHHHHH-HHTTSEEECC-------CHHHHHHHHHHC--THHHHHHHHHHHHHTT
T ss_pred HHHHHHHH-HHcCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHc
Confidence 99999999 5789999997 678999999999999999 9999999999999876
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=9.7e-37 Score=299.90 Aligned_cols=352 Identities=14% Similarity=0.129 Sum_probs=238.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCC------
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR------ 77 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 77 (460)
..+|||+|++.++.||++|+++|+++|.++||+|+++++ .+.+.+... ++.+..++.....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~ 84 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA------------GLEVVDVAPDYSAVKVFEQ 84 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT------------TCEEEESSTTCCHHHHHHH
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC------------CCeeEecCCccCHHHHhhh
Confidence 456899999999999999999999999999999999998 665555432 4778877643110
Q ss_pred --------------CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchh
Q 012587 78 --------------DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISA 143 (460)
Q Consensus 78 --------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~ 143 (460)
............+..........+.++++++ +||+||+|...+++..+|+.+|||+|.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~ 162 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAW 162 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTC
T ss_pred cccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCC
Confidence 0011122233444445555667788888887 999999998888899999999999998764421
Q ss_pred HHHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhh-hcCCCEEEEcChhhhchhHHHHHhhcC
Q 012587 144 CAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRL-SAHADGLILNTFEDLEGPILSQIRNHS 222 (460)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~le~p~~~~~~~~~ 222 (460)
..... .... ...+.. ....... .......+....+.+..+ ....
T Consensus 163 ~~~~~----~~~~-------------------------~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 207 (398)
T 3oti_A 163 RTRGM----HRSI-------------------------ASFLTD-LMDKHQVSLPEPVATIESFPPSLLLE-----AEPE 207 (398)
T ss_dssp CCTTH----HHHH-------------------------HTTCHH-HHHHTTCCCCCCSEEECSSCGGGGTT-----SCCC
T ss_pred Cccch----hhHH-------------------------HHHHHH-HHHHcCCCCCCCCeEEEeCCHHHCCC-----CCCC
Confidence 10000 0000 000000 1111110 112233343333333322 0000
Q ss_pred CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccC--CHHHHHHHHHHHhhCCCcEE
Q 012587 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM--SRDQLIEFYYGLVHSKKSFL 300 (460)
Q Consensus 223 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~--~~~~~~~~~~al~~~~~~~i 300 (460)
..++.++ |. . ....+.+|+...+++++|||++||.... ..+.+..+++++++.+.+++
T Consensus 208 ~~~~~~~-~~--~-----------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v 267 (398)
T 3oti_A 208 GWFMRWV-PY--G-----------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFV 267 (398)
T ss_dssp SBCCCCC-CC--C-----------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEE
T ss_pred CCCcccc-CC--C-----------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEE
Confidence 0011111 00 0 0112334665556789999999999653 45678889999998999999
Q ss_pred EEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhh
Q 012587 301 WVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQIN 380 (460)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~n 380 (460)
|+.++.. ...+. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|
T Consensus 268 ~~~g~~~------~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~ 334 (398)
T 3oti_A 268 LALGDLD------ISPLG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQH 334 (398)
T ss_dssp EECTTSC------CGGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSC
T ss_pred EEECCcC------hhhhc-----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHH
Confidence 9875321 01111 14679999999999999999997 99999999999999999999999999999999
Q ss_pred H--HHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 381 S--RFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 381 a--~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
+ .++ ++.|+|+.++ ++.+++.|. ++|+| ++++++++++++++.+. .. ...+.+.++.+
T Consensus 335 a~~~~~-~~~g~g~~~~~~~~~~~~l~----~ll~~--~~~~~~~~~~~~~~~~~----~~-~~~~~~~l~~l 395 (398)
T 3oti_A 335 TAREAV-SRRGIGLVSTSDKVDADLLR----RLIGD--ESLRTAAREVREEMVAL----PT-PAETVRRIVER 395 (398)
T ss_dssp TTHHHH-HHHTSEEECCGGGCCHHHHH----HHHHC--HHHHHHHHHHHHHHHTS----CC-HHHHHHHHHHH
T ss_pred HHHHHH-HHCCCEEeeCCCCCCHHHHH----HHHcC--HHHHHHHHHHHHHHHhC----CC-HHHHHHHHHHH
Confidence 9 999 5889999997 567877776 88888 99999999999998873 33 44445555554
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2.6e-34 Score=281.97 Aligned_cols=350 Identities=13% Similarity=0.152 Sum_probs=233.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEec-CCCCC--CC----C
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTL-TDGLP--RD----H 79 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~----~ 79 (460)
|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..+ +.... .. .
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~~~~~ 69 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA------------GLTTAGIRGNDRTGDTGGTTQL 69 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB------------TCEEEEC--------------C
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC------------CCceeeecCCccchhhhhhhcc
Confidence 7999999999999999999999999999999999986655555443 3566655 32110 00 0
Q ss_pred ------C--CCCCChHHHHHHHHhhC-------cHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhH
Q 012587 80 ------P--RTPDKFPELVDSLNCAT-------PPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISAC 144 (460)
Q Consensus 80 ------~--~~~~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 144 (460)
. .........+......+ ...+.++++++ +||+|++|...+.+..+|+.+|||++.+......
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 70 RFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp CSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 0 00011111222222223 45667777777 9999999987778899999999999997654321
Q ss_pred HHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHH---hhh--hcCCCEEEEcChhhhchhHHHHHh
Q 012587 145 AFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARE---TRL--SAHADGLILNTFEDLEGPILSQIR 219 (460)
Q Consensus 145 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~l~~~~~~le~p~~~~~~ 219 (460)
..... .......+.+. ... ....+..+....++++.+ .
T Consensus 148 ~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 190 (391)
T 3tsa_A 148 TAGPF--------------------------------SDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS-----D 190 (391)
T ss_dssp TTTHH--------------------------------HHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-----T
T ss_pred ccccc--------------------------------cchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-----C
Confidence 10000 00001111111 110 011244454444444332 1
Q ss_pred hcCC-CceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc--CC-HHHHHHHHHHHhhC
Q 012587 220 NHSC-PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV--MS-RDQLIEFYYGLVHS 295 (460)
Q Consensus 220 ~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~--~~-~~~~~~~~~al~~~ 295 (460)
. .. .++.++ |.. ....+.+|+...+++++|++++||... .. ..++..++++ ++.
T Consensus 191 ~-~~~~~~~~~-p~~-------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~ 248 (391)
T 3tsa_A 191 A-PQGAPVQYV-PYN-------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TEL 248 (391)
T ss_dssp S-CCCEECCCC-CCC-------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTS
T ss_pred C-CccCCeeee-cCC-------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccC
Confidence 1 00 112222 110 011233577655678999999999853 33 6778888888 877
Q ss_pred -CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceeccccc
Q 012587 296 -KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF 374 (460)
Q Consensus 296 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~ 374 (460)
+.+++|..++.. ...+. ..++|+.+.+|+|+.++|++|++ ||||||.||++||+++|+|+|++|..
T Consensus 249 p~~~~v~~~~~~~------~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 315 (391)
T 3tsa_A 249 PGVEAVIAVPPEH------RALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQY 315 (391)
T ss_dssp TTEEEEEECCGGG------GGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CCeEEEEEECCcc------hhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCc
Confidence 788888875321 01121 14679999999999999999997 99999999999999999999999999
Q ss_pred ccchhhHHHHHhhhceeeeecC---CcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 375 ADQQINSRFVGEVWKLGLDIKD---LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 375 ~DQ~~na~~~~e~~G~g~~~~~---~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
.||..|+.++ ++.|+|..+.. +.+.+.|.+++.++|+| ++++++++++++.+.+ .... ..+.+.++.+
T Consensus 316 ~~q~~~a~~~-~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~----~~~~-~~~~~~i~~~ 386 (391)
T 3tsa_A 316 FDQFDYARNL-AAAGAGICLPDEQAQSDHEQFTDSIATVLGD--TGFAAAAIKLSDEITA----MPHP-AALVRTLENT 386 (391)
T ss_dssp TTHHHHHHHH-HHTTSEEECCSHHHHTCHHHHHHHHHHHHTC--THHHHHHHHHHHHHHT----SCCH-HHHHHHHHHC
T ss_pred ccHHHHHHHH-HHcCCEEecCcccccCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHc----CCCH-HHHHHHHHHH
Confidence 9999999999 47899999953 37899999999999999 9999999999999876 3443 4444555544
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1.9e-32 Score=270.43 Aligned_cols=362 Identities=19% Similarity=0.214 Sum_probs=242.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCC---------
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDG--------- 74 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 74 (460)
..+|||+|++.++.||++|+++|+++|+++||+|++++++...+.+.+ . ++.+..++..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-~-----------g~~~~~~~~~~~~~~~~~~ 85 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-L-----------GFEPVATGMPVFDGFLAAL 85 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-T-----------TCEEEECCCCHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-c-----------CCceeecCcccccchhhhh
Confidence 456899999999999999999999999999999999998765444433 2 3777777630
Q ss_pred ---CCCCC------CCCCCChHHHHHHH-HhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecchhH
Q 012587 75 ---LPRDH------PRTPDKFPELVDSL-NCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISAC 144 (460)
Q Consensus 75 ---~~~~~------~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 144 (460)
..... ..........+... .......+.++++++ +||+|++|....++..+|+.+|||+|.+......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 163 (412)
T 3otg_A 86 RIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDT 163 (412)
T ss_dssp HHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC
T ss_pred hhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccC
Confidence 00000 00011222222222 222335667777776 9999999977778889999999999987654321
Q ss_pred HHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhh-------hcCCCEEEEcChhhhchhHHHH
Q 012587 145 AFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRL-------SAHADGLILNTFEDLEGPILSQ 217 (460)
Q Consensus 145 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~le~p~~~~ 217 (460)
.......+.. ........... ....+..+..+.+.++.+..
T Consensus 164 ~~~~~~~~~~------------------------------~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~-- 211 (412)
T 3otg_A 164 PDDLTRSIEE------------------------------EVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEF-- 211 (412)
T ss_dssp CSHHHHHHHH------------------------------HHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHH--
T ss_pred chhhhHHHHH------------------------------HHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcc--
Confidence 0000000000 00000000000 12344455555555444311
Q ss_pred HhhcCCCceeEeCccccccccCCCccccCCCCccccchhhhhh-hhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCC
Q 012587 218 IRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAW-LDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSK 296 (460)
Q Consensus 218 ~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~ 296 (460)
. .......+-+.... ......+| ....+++++|++++||........+..+++++++.+
T Consensus 212 --~-~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~ 271 (412)
T 3otg_A 212 --R-ARPRRHELRPVPFA-----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLD 271 (412)
T ss_dssp --H-TCTTEEECCCCCCC-----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSS
T ss_pred --c-CCCCcceeeccCCC-----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCC
Confidence 0 11111111111110 01123345 222457899999999997667788899999999889
Q ss_pred CcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhCCceeccccccc
Q 012587 297 KSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFAD 376 (460)
Q Consensus 297 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~D 376 (460)
.+++|..++... ...+.. .++|+.+.+|+|+.++|+++++ ||+|||.+|++||+++|+|+|++|...|
T Consensus 272 ~~~~~~~g~~~~-----~~~l~~-----~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~ 339 (412)
T 3otg_A 272 ADVLVASGPSLD-----VSGLGE-----VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGD 339 (412)
T ss_dssp SEEEEECCSSCC-----CTTCCC-----CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred CEEEEEECCCCC-----hhhhcc-----CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchh
Confidence 999988864310 112222 4579999999999999999998 9999999999999999999999999999
Q ss_pred chhhHHHHHhhhceeeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012587 377 QQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 451 (460)
Q Consensus 377 Q~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 451 (460)
|..|+.++. +.|+|..+. ++++++.|.+++.++|+| +++++++.+.++++.+. .+ ...+.+.++++.
T Consensus 340 q~~~~~~v~-~~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~l~ 407 (412)
T 3otg_A 340 SFANAQAVA-QAGAGDHLLPDNISPDSVSGAAKRLLAE--ESYRAGARAVAAEIAAM----PG-PDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHH-HHTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHS----CC-HHHHHTTHHHHH
T ss_pred HHHHHHHHH-HcCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHhcC----CC-HHHHHHHHHHHh
Confidence 999999994 789999997 578999999999999999 99999999999988873 43 444455555544
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=3.5e-29 Score=242.32 Aligned_cols=320 Identities=16% Similarity=0.130 Sum_probs=201.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh-HHhhccccccccccCCCCceEEecCC-CCCCC-CCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTD-GLPRD-HPRTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~ 83 (460)
.||+|+..|+.||++|.++||++|+++||+|+|++++...+ .+.+.. ++.++.++. +++.. .....
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~-----------g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA-----------GLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG-----------TCCEEECC-------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc-----------CCcEEEEECCCcCCCCHHHHH
Confidence 39999999999999999999999999999999999755433 343333 366776653 22211 11112
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
..+..++..+ .....++++. +||+||++..+. .+..+|+.+|||++....... +.
T Consensus 72 ~~~~~~~~~~-----~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~~---------~G------- 128 (365)
T 3s2u_A 72 KAPLELLKSL-----FQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAV---------AG------- 128 (365)
T ss_dssp -CHHHHHHHH-----HHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSSS---------CC-------
T ss_pred HHHHHHHHHH-----HHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecchh---------hh-------
Confidence 2222222222 3346677887 999999986655 467889999999997532210 00
Q ss_pred CCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCCC
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIP 241 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~~ 241 (460)
...+... +..+.++ .++++..+ ...+.+++|..........+
T Consensus 129 --------------------------~~nr~l~--~~a~~v~-~~~~~~~~---------~~~k~~~~g~pvr~~~~~~~ 170 (365)
T 3s2u_A 129 --------------------------TANRSLA--PIARRVC-EAFPDTFP---------ASDKRLTTGNPVRGELFLDA 170 (365)
T ss_dssp --------------------------HHHHHHG--GGCSEEE-ESSTTSSC---------C---CEECCCCCCGGGCCCT
T ss_pred --------------------------hHHHhhc--cccceee-eccccccc---------CcCcEEEECCCCchhhccch
Confidence 0011111 2233333 33332111 22456777765543221100
Q ss_pred ccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC----CCcEEEEEccCCCCCCCCCCCC
Q 012587 242 EKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS----KKSFLWVIRPDLISGKDGENQI 317 (460)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~ 317 (460)
.......+++++|+|..||.... ...+.+.++++.+ +..+++.++.. ..+.+
T Consensus 171 ----------------~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~------~~~~~ 226 (365)
T 3s2u_A 171 ----------------HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ------HAEIT 226 (365)
T ss_dssp ----------------TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT------THHHH
T ss_pred ----------------hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc------ccccc
Confidence 00111134678899999998743 3334455666654 34566665421 10011
Q ss_pred chHHHHHhcCCceeeeecCh-HhhhcccccccccccCChhHHHHHHHhCCceeccccc----ccchhhHHHHHhhhceee
Q 012587 318 PEELLEATKERGCIAGWVPQ-EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF----ADQQINSRFVGEVWKLGL 392 (460)
Q Consensus 318 ~~~~~~~~~~n~~~~~~vp~-~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~~~e~~G~g~ 392 (460)
... ....+.|+.+.+|+++ .++|+.+++ +|||+|.+|++|++++|+|+|++|.. .+|..||+.++ +.|+|.
T Consensus 227 ~~~-~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~-~~G~a~ 302 (365)
T 3s2u_A 227 AER-YRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLV-RSGAGR 302 (365)
T ss_dssp HHH-HHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHH-TTTSEE
T ss_pred cce-ecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHH-HCCCEE
Confidence 111 1235668899999997 689999998 99999999999999999999999973 58999999995 789999
Q ss_pred eec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 012587 393 DIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKK 431 (460)
Q Consensus 393 ~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~ 431 (460)
.+. ++++++.|.++|.++|+| ++.+ ++|++..++
T Consensus 303 ~l~~~~~~~~~L~~~i~~ll~d--~~~~---~~m~~~a~~ 337 (365)
T 3s2u_A 303 LLPQKSTGAAELAAQLSEVLMH--PETL---RSMADQARS 337 (365)
T ss_dssp ECCTTTCCHHHHHHHHHHHHHC--THHH---HHHHHHHHH
T ss_pred EeecCCCCHHHHHHHHHHHHCC--HHHH---HHHHHHHHh
Confidence 998 789999999999999998 5543 345555554
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.1e-26 Score=200.00 Aligned_cols=162 Identities=20% Similarity=0.395 Sum_probs=134.8
Q ss_pred cchhhhhhhhcCCCCcEEEEEecCcc-cCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCcee
Q 012587 253 IDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCI 331 (460)
Q Consensus 253 ~~~~l~~~l~~~~~~~~V~vs~GS~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 331 (460)
.+.++.+|++..+++++|||++||.. ......+..+++++++.+.+++|+.++.. ++ ..++|+.+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~----------~~----~~~~~v~~ 72 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK----------PD----TLGLNTRL 72 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC----------CT----TCCTTEEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC----------cc----cCCCcEEE
Confidence 46678999986667899999999986 34567788899999988999999885321 11 14569999
Q ss_pred eeecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHH
Q 012587 332 AGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDL 410 (460)
Q Consensus 332 ~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~ 410 (460)
.+|+|+.+++.++.+++||||||.||++||+++|+|+|++|...||..||+++ ++.|+|+.+. ++++.+.|.++|.++
T Consensus 73 ~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 73 YKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFNTMSSTDLLNALKRV 151 (170)
T ss_dssp ESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTTTCCHHHHHHHHHHH
T ss_pred ecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccccCCHHHHHHHHHHH
Confidence 99999999995444445999999999999999999999999999999999999 5789999997 678999999999999
Q ss_pred HhHhHHHHHHHHHHHHHHHHH
Q 012587 411 MVERKEEFMESADRMANLAKK 431 (460)
Q Consensus 411 l~~~~~~~~~~a~~l~~~~~~ 431 (460)
++| ++|+++++++++.+++
T Consensus 152 l~~--~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 152 IND--PSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHC--HHHHHHHHHHC-----
T ss_pred HcC--HHHHHHHHHHHHHhhC
Confidence 998 8999999999988763
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=2.3e-20 Score=180.66 Aligned_cols=333 Identities=12% Similarity=0.066 Sum_probs=203.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh-HHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|||++++.+..||..+.+.|+++|.++||+|++++...... ...+.. ++.+..++...... ..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~-----~~ 70 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH-----------GIEIDFIRISGLRG-----KG 70 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG-----------TCEEEECCCCCCTT-----CC
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc-----------CCceEEecCCccCc-----Cc
Confidence 79999998888999999999999999999999999754322 121211 36666654211000 11
Q ss_pred hHHHHH---HHHhhCcHHHHHHHHcCCCCccEEEEcCCc--chHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCC
Q 012587 86 FPELVD---SLNCATPPLLKEMVSDSKSPVNCIITDGYM--SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (460)
Q Consensus 86 ~~~~~~---~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
....+. .... ....+..++++. +||+|+++... ..+..++..+|+|+|....... +.
T Consensus 71 ~~~~~~~~~~~~~-~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~---------~~------ 132 (364)
T 1f0k_A 71 IKALIAAPLRIFN-AWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI---------AG------ 132 (364)
T ss_dssp HHHHHTCHHHHHH-HHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS---------CC------
T ss_pred cHHHHHHHHHHHH-HHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC---------Cc------
Confidence 111110 1111 223456667776 99999998643 2467788899999986433210 00
Q ss_pred CCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCccccccccCC
Q 012587 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRI 240 (460)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~~~~~ 240 (460)
. ..+.. ....+.+++.+.. .++++..+|........
T Consensus 133 ------------------------~---~~~~~--~~~~d~v~~~~~~-------------~~~~~~~i~n~v~~~~~-- 168 (364)
T 1f0k_A 133 ------------------------L---TNKWL--AKIATKVMQAFPG-------------AFPNAEVVGNPVRTDVL-- 168 (364)
T ss_dssp ------------------------H---HHHHH--TTTCSEEEESSTT-------------SSSSCEECCCCCCHHHH--
T ss_pred ------------------------H---HHHHH--HHhCCEEEecChh-------------hcCCceEeCCccchhhc--
Confidence 0 00111 1334555544321 12245555543321110
Q ss_pred CccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCc
Q 012587 241 PEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIP 318 (460)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~ 318 (460)
.... ..+.+....++++|++..|+... ......++++++.+ +.++++.++.+ . .
T Consensus 169 -----------~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~------~----~ 224 (364)
T 1f0k_A 169 -----------ALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKG------S----Q 224 (364)
T ss_dssp -----------TSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTT------C----H
T ss_pred -----------ccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCc------h----H
Confidence 0000 11112223356778888888753 33444555666544 45656666421 1 1
Q ss_pred hHHHH---Hhc-CCceeeeecC-hHhhhcccccccccccCChhHHHHHHHhCCceeccccc---ccchhhHHHHHhhhce
Q 012587 319 EELLE---ATK-ERGCIAGWVP-QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF---ADQQINSRFVGEVWKL 390 (460)
Q Consensus 319 ~~~~~---~~~-~n~~~~~~vp-~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~---~DQ~~na~~~~e~~G~ 390 (460)
+.+.+ +.+ +|+.+.+|++ ...+++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+. +.|.
T Consensus 225 ~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~-~~g~ 301 (364)
T 1f0k_A 225 QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE-KAGA 301 (364)
T ss_dssp HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH-HTTS
T ss_pred HHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHH-hCCc
Confidence 22221 222 5899999995 4889999998 99999999999999999999999987 69999999995 6799
Q ss_pred eeeec-CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 391 GLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 391 g~~~~-~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
|..++ .+.+.+.|.++|.++ | ++.+++..+-+++.. ...+++.+.+.++.+...
T Consensus 302 g~~~~~~d~~~~~la~~i~~l--~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 302 AKIIEQPQLSVDAVANTLAGW--S--RETLLTMAERARAAS-----IPDATERVANEVSRVARA 356 (364)
T ss_dssp EEECCGGGCCHHHHHHHHHTC--C--HHHHHHHHHHHHHTC-----CTTHHHHHHHHHHHHHTT
T ss_pred EEEeccccCCHHHHHHHHHhc--C--HHHHHHHHHHHHHhh-----ccCHHHHHHHHHHHHHHH
Confidence 99886 556799999999999 4 666655544443332 134455555555665554
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.69 E-value=1.7e-15 Score=139.22 Aligned_cols=260 Identities=13% Similarity=0.121 Sum_probs=161.6
Q ss_pred cEEEEEcCC----CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 7 VHVAILPLP----AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 7 ~~il~~~~~----~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
|||+|-+-+ +.||+.++++||++|+ +|+|++...... +.+.. ++.+..++.
T Consensus 1 mki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~-~~~~~-----------g~~v~~l~~--------- 55 (282)
T 3hbm_A 1 MKVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGS-LIDEI-----------PYPVYELSS--------- 55 (282)
T ss_dssp CCEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTC-CGGGC-----------CSCEEECSS---------
T ss_pred CEEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHh-HHHHC-----------CCeEEEcCc---------
Confidence 578887664 7899999999999999 899999744222 22211 244454442
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhccccccCC
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAG 159 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
. -.+.+.+++++. ++|+||.|.+.. +-..+....|++++.+.-... .
T Consensus 56 -~------------d~~~~~~~l~~~--~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~iDD~~~------~--------- 105 (282)
T 3hbm_A 56 -E------------SIYELINLIKEE--KFELLIIDHYGISVDDEKLIKLETGVKILSFDDEIK------P--------- 105 (282)
T ss_dssp -S------------CHHHHHHHHHHH--TCSEEEEECTTCCHHHHHHHHHHHCCEEEEECSSCC------C---------
T ss_pred -c------------CHHHHHHHHHhC--CCCEEEEECCCCCHHHHHHHHHhcCcEEEEEecCCC------c---------
Confidence 0 113445666665 999999998877 333334446888877543210 0
Q ss_pred CCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCC--ceeEeCccccccc
Q 012587 160 ELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCP--NIYSIGPLNAHLK 237 (460)
Q Consensus 160 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~--~~~~vG~~~~~~~ 237 (460)
..++. ++|....-+. .++ .. ..| ..+..||-....+
T Consensus 106 -------------------------------------~~~Dl-lin~~~~~~~--~~Y-~~-~~p~~~~~l~G~~Y~~lR 143 (282)
T 3hbm_A 106 -------------------------------------HHCDI-LLNVNAYAKA--SDY-EG-LVPFKCEVRCGFSYALIR 143 (282)
T ss_dssp -------------------------------------CCCSE-EEECSTTCCG--GGG-TT-TCC-CCEEEESGGGCCCC
T ss_pred -------------------------------------ccCCE-EEeCCcccch--hhc-cc-cCCCCCeEeeCCcccccC
Confidence 11333 2332211110 000 11 112 2467787433222
Q ss_pred cCCCccccCCCCccccchhhhhhhh-cCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCC
Q 012587 238 VRIPEKTYSSSSLWKIDRSCMAWLD-KQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQ 316 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 316 (460)
+++.+.-. .....+.|+|++|.... .+....+++++.... ++.++.+.+ . .
T Consensus 144 -----------------~eF~~~~~~~r~~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~------~--~ 195 (282)
T 3hbm_A 144 -----------------EEFYQEAKENRKKKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSS------N--P 195 (282)
T ss_dssp -----------------HHHHHHTTCCCCCCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTT------C--T
T ss_pred -----------------HHHHHhhhhccccCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCC------c--h
Confidence 11111110 12245789999997542 235667778877654 566666432 1 2
Q ss_pred CchHHHHH--hcCCceeeeecCh-HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeee
Q 012587 317 IPEELLEA--TKERGCIAGWVPQ-EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD 393 (460)
Q Consensus 317 ~~~~~~~~--~~~n~~~~~~vp~-~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~ 393 (460)
..+.+.+. ...|+.+..|+++ .++|..+++ +|++|| +|++|+++.|+|++++|...+|..||+.++ +.|++..
T Consensus 196 ~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~-~~G~~~~ 271 (282)
T 3hbm_A 196 NLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLA-KKGYEVE 271 (282)
T ss_dssp THHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHH-HTTCEEE
T ss_pred HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHH-HCCCEEE
Confidence 22333221 2348999999986 579999998 999999 899999999999999999999999999995 7899998
Q ss_pred ec
Q 012587 394 IK 395 (460)
Q Consensus 394 ~~ 395 (460)
+.
T Consensus 272 ~~ 273 (282)
T 3hbm_A 272 YK 273 (282)
T ss_dssp CG
T ss_pred cc
Confidence 85
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.62 E-value=1e-15 Score=134.97 Aligned_cols=132 Identities=12% Similarity=0.066 Sum_probs=95.3
Q ss_pred CCCCcEEEEEecCcccCCHHHHHHH-----HHHHhhCC-CcEEEEEccCCCCCCCCCCCCchHHHHHh---------c--
Q 012587 264 QPKQSVIYVSFGSIAVMSRDQLIEF-----YYGLVHSK-KSFLWVIRPDLISGKDGENQIPEELLEAT---------K-- 326 (460)
Q Consensus 264 ~~~~~~V~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 326 (460)
..++++|||+.||... -.+.+..+ ++++...+ .++++.++..... ....+.... |
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhccccccccccc
Confidence 3468999999999732 23444433 47887777 7888888643210 011111001 1
Q ss_pred ---------------C--CceeeeecCh-Hhhhc-ccccccccccCChhHHHHHHHhCCceeccccc----ccchhhHHH
Q 012587 327 ---------------E--RGCIAGWVPQ-EEVLA-HSAVGGFLTHCGWNSTLESIVAGMPMICWPSF----ADQQINSRF 383 (460)
Q Consensus 327 ---------------~--n~~~~~~vp~-~~il~-~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~ 383 (460)
. ++.+.+|+++ .++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 2 3445688876 58999 9998 99999999999999999999999984 469999999
Q ss_pred HHhhhceeeeecCCcchHHHHHHHHHH
Q 012587 384 VGEVWKLGLDIKDLCDRNIVEKAVNDL 410 (460)
Q Consensus 384 ~~e~~G~g~~~~~~~~~~~l~~~i~~~ 410 (460)
++ +.|+++.+ +.+.|.++|.++
T Consensus 175 l~-~~G~~~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 175 FV-ELGYVWSC----APTETGLIAGLR 196 (224)
T ss_dssp HH-HHSCCCEE----CSCTTTHHHHHH
T ss_pred HH-HCCCEEEc----CHHHHHHHHHHH
Confidence 95 78998766 667777778776
No 25
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.47 E-value=8.3e-13 Score=128.72 Aligned_cols=328 Identities=11% Similarity=0.044 Sum_probs=171.6
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchh---HHhhccccccccccCCCCce-EEecCCCCCC
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYD---RVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPR 77 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 77 (460)
+|.||||++++ |++....=+.+|.++|.++ |+++.++.+...++ .+.+..+ +. -+.+. .
T Consensus 22 ~~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~-----------i~~~~~l~--~-- 85 (396)
T 3dzc_A 22 SNAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFS-----------ITPDFDLN--I-- 85 (396)
T ss_dssp --CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTT-----------CCCSEECC--C--
T ss_pred hCCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcC-----------CCCceeee--c--
Confidence 46788998776 6666677778899999987 78987555544433 2222211 10 00111 0
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC--Cc-chHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDG--YM-SRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
.....+...... .....+.++++++ +||+|+.-. .+ +.+..+|..+|||++.+..... . +.
T Consensus 86 --~~~~~~~~~~~~----~~~~~l~~~l~~~--kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~r-------s-~~ 149 (396)
T 3dzc_A 86 --MEPGQTLNGVTS----KILLGMQQVLSSE--QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLR-------T-GN 149 (396)
T ss_dssp --CCTTCCHHHHHH----HHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCC-------C-SC
T ss_pred --CCCCCCHHHHHH----HHHHHHHHHHHhc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-------c-cc
Confidence 001123333222 2335677888887 999998632 22 3457889999999876432100 0 00
Q ss_pred cccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCcc
Q 012587 155 IIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPL 232 (460)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~ 232 (460)
....+.+...+.. ....++.+++.+-.. .+....... .+++.+|-.
T Consensus 150 --------------------------~~~~~~~~~~r~~-~~~~a~~~~~~se~~-----~~~l~~~G~~~~ki~vvGn~ 197 (396)
T 3dzc_A 150 --------------------------IYSPWPEEGNRKL-TAALTQYHFAPTDTS-----RANLLQENYNAENIFVTGNT 197 (396)
T ss_dssp --------------------------TTSSTTHHHHHHH-HHHTCSEEEESSHHH-----HHHHHHTTCCGGGEEECCCH
T ss_pred --------------------------cccCCcHHHHHHH-HHHhcCEEECCCHHH-----HHHHHHcCCCcCcEEEECCc
Confidence 0000111111111 013456666666321 111122022 358888843
Q ss_pred ccccccCCCccccCCCCcccc----chhhhhhhh-cCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEE
Q 012587 233 NAHLKVRIPEKTYSSSSLWKI----DRSCMAWLD-KQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWV 302 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~-~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~ 302 (460)
........+ +.... .+++.+-+. ..+++++|+++.+-..+.... +..++++++.+ +.++++.
T Consensus 198 ~~d~~~~~~-------~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~ 269 (396)
T 3dzc_A 198 VIDALLAVR-------EKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYP 269 (396)
T ss_dssp HHHHHHHHH-------HHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEE
T ss_pred HHHHHHHhh-------hhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEE
Confidence 221110000 00000 012222222 113567787776322222222 45566665543 4556655
Q ss_pred EccCCCCCCCCCCCCchHHHHH--hcCCceeeeecC---hHhhhcccccccccccCChhHHHHHHHhCCceecccccccc
Q 012587 303 IRPDLISGKDGENQIPEELLEA--TKERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQ 377 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~vp---~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ 377 (460)
.+.+ + .+...+.+. ..+|+.+.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|+.....++
T Consensus 270 ~g~~-------~-~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~ 338 (396)
T 3dzc_A 270 VHLN-------P-NVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTER 338 (396)
T ss_dssp CCBC-------H-HHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSC
T ss_pred eCCC-------h-HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcc
Confidence 4311 0 111122221 235888877775 4577888997 898887 6668999999999998655555
Q ss_pred hhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 378 QINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 378 ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
++ .+ +.|.++.+. .+.++|.+++.++|+| +..+++.
T Consensus 339 ~e---~v--~~G~~~lv~--~d~~~l~~ai~~ll~d--~~~~~~m 374 (396)
T 3dzc_A 339 PE---AV--AAGTVKLVG--TNQQQICDALSLLLTD--PQAYQAM 374 (396)
T ss_dssp HH---HH--HHTSEEECT--TCHHHHHHHHHHHHHC--HHHHHHH
T ss_pred hH---HH--HcCceEEcC--CCHHHHHHHHHHHHcC--HHHHHHH
Confidence 32 23 358776553 2799999999999987 6655443
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.47 E-value=5.9e-12 Score=121.95 Aligned_cols=324 Identities=14% Similarity=0.080 Sum_probs=166.6
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhccccccccccCCCCceE-EecCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF-KTLTDGLPRD 78 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 78 (460)
|+. .||||++++.. .+.......|+++|.++ ||+|.++++........+... ..++.+ ..++- ..
T Consensus 1 ~~~-~mmkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~--~~- 67 (376)
T 1v4v_A 1 MEG-GMKRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS--------LFGIQEDRNLDV--MQ- 67 (376)
T ss_dssp ----CCEEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH--------TTTCCCSEECCC--CS-
T ss_pred CCC-CceEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH--------HcCCCccccccc--CC-
Confidence 444 36899999854 33344567789999998 899887766443222211100 001221 12211 00
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC--c-chHHHHHHHhCCceEEEecchhHHHHHHhhcccc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY--M-SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~--~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (460)
...+....+.. ....+..++++. +||+|++... . +.+..+|..+|||++.+..... . ..
T Consensus 68 ---~~~~~~~~~~~----~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-------~-~~- 129 (376)
T 1v4v_A 68 ---ERQALPDLAAR----ILPQAARALKEM--GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLR-------S-GN- 129 (376)
T ss_dssp ---SCCCHHHHHHH----HHHHHHHHHHHT--TCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCC-------C-SC-
T ss_pred ---CCccHHHHHHH----HHHHHHHHHHHc--CCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCc-------c-cc-
Confidence 11222221111 124567778886 9999998422 2 2456788999999875432210 0 00
Q ss_pred ccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCccc
Q 012587 156 IDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPLN 233 (460)
Q Consensus 156 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~~ 233 (460)
... ....... ..... ..++.++..+...- +....... .++..+|...
T Consensus 130 -------------------~~~--~~~~~~~---~~~~~--~~~~~~~~~s~~~~-----~~l~~~g~~~~ki~vi~n~~ 178 (376)
T 1v4v_A 130 -------------------LKE--PFPEEAN---RRLTD--VLTDLDFAPTPLAK-----ANLLKEGKREEGILVTGQTG 178 (376)
T ss_dssp -------------------TTS--STTHHHH---HHHHH--HHCSEEEESSHHHH-----HHHHTTTCCGGGEEECCCHH
T ss_pred -------------------ccC--CCchHHH---HHHHH--HHhceeeCCCHHHH-----HHHHHcCCCcceEEEECCch
Confidence 000 0000011 11111 33556666653221 11122011 2466777432
Q ss_pred cccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCC
Q 012587 234 AHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLI 308 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~ 308 (460)
....... ....++.+.+ +++++|+++.|...... .+..++++++.+ +.++++..+.+
T Consensus 179 ~d~~~~~-----------~~~~~~~~~~---~~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~-- 240 (376)
T 1v4v_A 179 VDAVLLA-----------AKLGRLPEGL---PEGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN-- 240 (376)
T ss_dssp HHHHHHH-----------HHHCCCCTTC---CSSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC--
T ss_pred HHHHhhh-----------hhhhHHHHhc---CCCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC--
Confidence 1110000 0000111112 24567778888654322 234455555432 45555544311
Q ss_pred CCCCCCCCCchHHHHHh--cCCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHH
Q 012587 309 SGKDGENQIPEELLEAT--KERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRF 383 (460)
Q Consensus 309 ~~~~~~~~~~~~~~~~~--~~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~ 383 (460)
..+.+.+.+.. .+++.+.+++++ ..+++.+++ +|+.+| |.+.||+++|+|+|+.+..+++...
T Consensus 241 ------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~--- 308 (376)
T 1v4v_A 241 ------PVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG--- 308 (376)
T ss_dssp ------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---
T ss_pred ------HHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---
Confidence 00112222211 358888866665 588899998 888873 5566999999999998876666652
Q ss_pred HHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 384 VGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 384 ~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
+ +.|.|..+. .+.++|.+++.++++| ++.+++.
T Consensus 309 ~--~~g~g~lv~--~d~~~la~~i~~ll~d--~~~~~~~ 341 (376)
T 1v4v_A 309 L--KAGILKLAG--TDPEGVYRVVKGLLEN--PEELSRM 341 (376)
T ss_dssp H--HHTSEEECC--SCHHHHHHHHHHHHTC--HHHHHHH
T ss_pred h--cCCceEECC--CCHHHHHHHHHHHHhC--hHhhhhh
Confidence 3 347887774 4899999999999997 6544443
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.47 E-value=2.7e-11 Score=117.76 Aligned_cols=324 Identities=13% Similarity=0.082 Sum_probs=173.9
Q ss_pred CCCCcEEEEEcC--C--CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 3 KQDHVHVAILPL--P--AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 3 ~~~~~~il~~~~--~--~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
||+||||++++. + ..|.-.-...+++.| +||+|++++............. ..++.+..++.....
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~- 69 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDK--------TLDYEVIRWPRSVML- 69 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHT--------TCSSEEEEESSSSCC-
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcc--------ccceEEEEccccccc-
Confidence 356889999985 3 467778888999999 7999999997554331111100 224666666532111
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
... .....+.+++++. +||+|++..... ....++..+|+|.+.+......... .
T Consensus 70 -----~~~---------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~---~----- 125 (394)
T 3okp_A 70 -----PTP---------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW---S----- 125 (394)
T ss_dssp -----SCH---------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH---T-----
T ss_pred -----cch---------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh---h-----
Confidence 111 1224556777776 999999765433 4566688899984443332211100 0
Q ss_pred cCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCCCceeEeCcccccc
Q 012587 157 DAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHL 236 (460)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~~~~~~vG~~~~~~ 236 (460)
.........+. ....++.+++.+....+.- ..... ...++..+.......
T Consensus 126 -------------------------~~~~~~~~~~~--~~~~~d~ii~~s~~~~~~~-~~~~~--~~~~~~vi~ngv~~~ 175 (394)
T 3okp_A 126 -------------------------MLPGSRQSLRK--IGTEVDVLTYISQYTLRRF-KSAFG--SHPTFEHLPSGVDVK 175 (394)
T ss_dssp -------------------------TSHHHHHHHHH--HHHHCSEEEESCHHHHHHH-HHHHC--SSSEEEECCCCBCTT
T ss_pred -------------------------hcchhhHHHHH--HHHhCCEEEEcCHHHHHHH-HHhcC--CCCCeEEecCCcCHH
Confidence 01111222221 1256778888885432211 00000 113455554333211
Q ss_pred ccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCC
Q 012587 237 KVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDG 313 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~ 313 (460)
...... ......+.+-+.. +++..+++..|+... ...+.+...+..+.+. +.+++++ +.+
T Consensus 176 ~~~~~~--------~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g------- 238 (394)
T 3okp_A 176 RFTPAT--------PEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIV-GSG------- 238 (394)
T ss_dssp TSCCCC--------HHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEE-CCC-------
T ss_pred HcCCCC--------chhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEE-cCc-------
Confidence 110000 0011223333321 234456677888652 2333333333333332 4555544 211
Q ss_pred CCCCchHHHH---HhcCCceeeeecChH---hhhcccccccccc-----------cCChhHHHHHHHhCCceeccccccc
Q 012587 314 ENQIPEELLE---ATKERGCIAGWVPQE---EVLAHSAVGGFLT-----------HCGWNSTLESIVAGMPMICWPSFAD 376 (460)
Q Consensus 314 ~~~~~~~~~~---~~~~n~~~~~~vp~~---~il~~~~~~~~I~-----------HGG~gs~~eal~~GvP~l~~P~~~D 376 (460)
.....+.+ ...+++.+.+|+|+. .++..+++ +|. -|...++.||+++|+|+|+.+..
T Consensus 239 --~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~-- 312 (394)
T 3okp_A 239 --RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG-- 312 (394)
T ss_dssp --TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST--
T ss_pred --hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC--
Confidence 11222221 234789999999864 46788887 665 55567999999999999997643
Q ss_pred chhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 377 QQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 377 Q~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
.....+ +. |.|..+ ..-+.+++.++|.++++| +..+++
T Consensus 313 --~~~e~i-~~-~~g~~~-~~~d~~~l~~~i~~l~~~--~~~~~~ 350 (394)
T 3okp_A 313 --GAPETV-TP-ATGLVV-EGSDVDKLSELLIELLDD--PIRRAA 350 (394)
T ss_dssp --TGGGGC-CT-TTEEEC-CTTCHHHHHHHHHHHHTC--HHHHHH
T ss_pred --ChHHHH-hc-CCceEe-CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 333344 33 466666 445899999999999997 554433
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.44 E-value=3.2e-12 Score=124.74 Aligned_cols=323 Identities=12% Similarity=0.049 Sum_probs=167.9
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccch---hHHhhccccccccccCCCCceE-EecCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYY---DRVIRHSSDAFSRYMQIPGFQF-KTLTDGLPR 77 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 77 (460)
|+||||++++ |++....=+..|.++|.++ |+++.++.+...+ +.+.+..+ +.. +.+. +.
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~-----------i~~~~~l~--v~- 89 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFD-----------IKPDIDLD--IM- 89 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTT-----------CCCSEECC--CC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcC-----------CCCCcccc--cC-
Confidence 5667998876 5555566668899999988 6887766554332 22222211 100 0111 00
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC---cchHHHHHHHhCCceEEEecchhHHHHHHhhccc
Q 012587 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY---MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~---~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (460)
....+...... .....+.+++++. +||+|+.-.- .+.+..+|..+|||++.+..... . +.
T Consensus 90 ---~~~~~~~~~~~----~~~~~l~~~l~~~--kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglr-------s-~~ 152 (403)
T 3ot5_A 90 ---KKGQTLAEITS----RVMNGINEVIAAE--NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLR-------T-WN 152 (403)
T ss_dssp ---C-CCCHHHHHH----HHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCC-------C-SC
T ss_pred ---CCCCCHHHHHH----HHHHHHHHHHHHc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-------c-cc
Confidence 01123332222 2335677888887 9999986322 22467889999999876432100 0 00
Q ss_pred cccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCcc
Q 012587 155 IIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPL 232 (460)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~ 232 (460)
.+ ........+.. .. ..++.++..+-.. .+....... .+++.+|..
T Consensus 153 --------------------~~--~~~p~~~~r~~---~~--~~a~~~~~~se~~-----~~~l~~~Gi~~~~i~vvGn~ 200 (403)
T 3ot5_A 153 --------------------KY--SPFPEEMNRQL---TG--VMADIHFSPTKQA-----KENLLAEGKDPATIFVTGNT 200 (403)
T ss_dssp --------------------TT--SSTTHHHHHHH---HH--HHCSEEEESSHHH-----HHHHHHTTCCGGGEEECCCH
T ss_pred --------------------cc--cCCcHHHHHHH---HH--HhcCEEECCCHHH-----HHHHHHcCCCcccEEEeCCc
Confidence 00 00001111111 11 2345556555321 111122022 358888854
Q ss_pred ccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhh-----CCCcEEEEEccCC
Q 012587 233 NAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVH-----SKKSFLWVIRPDL 307 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~ 307 (460)
........++. ....+..+.+ .++++++++.|.....+. .+..++++++. .+.++++..+.+
T Consensus 201 ~~D~~~~~~~~--------~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~- 267 (403)
T 3ot5_A 201 AIDALKTTVQK--------DYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLN- 267 (403)
T ss_dssp HHHHHHHHSCT--------TCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSC-
T ss_pred hHHHHHhhhhh--------hcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCC-
Confidence 32111000000 0011122222 356788887664322121 13445555443 244566554211
Q ss_pred CCCCCCCCCCchHHHHH--hcCCceeeeecC---hHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHH
Q 012587 308 ISGKDGENQIPEELLEA--TKERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSR 382 (460)
Q Consensus 308 ~~~~~~~~~~~~~~~~~--~~~n~~~~~~vp---~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~ 382 (460)
+ .+...+.+. ..+|+.+.++++ ...+++.+++ +|+-.|..+ .||.++|+|+|++|...++++
T Consensus 268 ------~-~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e--- 334 (403)
T 3ot5_A 268 ------P-AVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE--- 334 (403)
T ss_dssp ------H-HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH---
T ss_pred ------H-HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh---
Confidence 0 111111111 235888888886 4577888887 888775333 799999999999977667664
Q ss_pred HHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHH
Q 012587 383 FVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 383 ~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
.+ +.|.|+.+. .+.++|.+++.++|+| +..+++.
T Consensus 335 ~v--~~g~~~lv~--~d~~~l~~ai~~ll~~--~~~~~~m 368 (403)
T 3ot5_A 335 GI--EAGTLKLIG--TNKENLIKEALDLLDN--KESHDKM 368 (403)
T ss_dssp HH--HHTSEEECC--SCHHHHHHHHHHHHHC--HHHHHHH
T ss_pred he--eCCcEEEcC--CCHHHHHHHHHHHHcC--HHHHHHH
Confidence 23 358777763 3899999999999987 6655443
No 29
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.40 E-value=2.9e-10 Score=112.36 Aligned_cols=354 Identities=14% Similarity=0.096 Sum_probs=175.2
Q ss_pred CCCcEEEEEcC-----------CCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecC
Q 012587 4 QDHVHVAILPL-----------PAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT 72 (460)
Q Consensus 4 ~~~~~il~~~~-----------~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (460)
.+||||++++. ...|+-.....|+++|.++||+|++++........... .. ..++.+..++
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~---~~~v~v~~~~ 89 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RV---AENLRVINIA 89 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EE---ETTEEEEEEC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cc---cCCeEEEEec
Confidence 57899999995 23578888999999999999999999964321110000 00 2346666665
Q ss_pred CCCCCCCCCCCCChHHHHHHHHhhCcHHHHHH-HHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHH
Q 012587 73 DGLPRDHPRTPDKFPELVDSLNCATPPLLKEM-VSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSF 149 (460)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~ 149 (460)
....... ........+..+. ..+... ++.. .+||+|++..... .+..++..+|+|+|...........
T Consensus 90 ~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-- 160 (438)
T 3c48_A 90 AGPYEGL--SKEELPTQLAAFT----GGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN-- 160 (438)
T ss_dssp CSCSSSC--CGGGGGGGHHHHH----HHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS--
T ss_pred CCCcccc--chhHHHHHHHHHH----HHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc--
Confidence 3211110 0111111122111 112222 4433 2499999875322 3456778899999886554321100
Q ss_pred hhccccccCCCCCCCCCccCCCCCCcccCCCCC-ChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC-Ccee
Q 012587 150 HCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPM-DPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC-PNIY 227 (460)
Q Consensus 150 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~~~ 227 (460)
..... .... ........+ .....++.+++.+....+.- ..... .. .++.
T Consensus 161 ~~~~~------------------------~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~-~~~~g--~~~~k~~ 211 (438)
T 3c48_A 161 SYRDD------------------------SDTPESEARRICEQ--QLVDNADVLAVNTQEEMQDL-MHHYD--ADPDRIS 211 (438)
T ss_dssp CC----------------------------CCHHHHHHHHHHH--HHHHHCSEEEESSHHHHHHH-HHHHC--CCGGGEE
T ss_pred ccccc------------------------cCCcchHHHHHHHH--HHHhcCCEEEEcCHHHHHHH-HHHhC--CChhheE
Confidence 00000 0000 000111111 22356778888885432211 01000 11 2355
Q ss_pred EeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhhC----CCcEEEE
Q 012587 228 SIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVHS----KKSFLWV 302 (460)
Q Consensus 228 ~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~~----~~~~i~~ 302 (460)
.+............+. .....+.+-+.. ++...+++..|+... ...+.+...+..+.+. +.++++
T Consensus 212 vi~ngvd~~~~~~~~~--------~~~~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i- 281 (438)
T 3c48_A 212 VVSPGADVELYSPGND--------RATERSRRELGI-PLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVII- 281 (438)
T ss_dssp ECCCCCCTTTSCCC------------CHHHHHHTTC-CSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEE-
T ss_pred EecCCccccccCCccc--------chhhhhHHhcCC-CCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEE-
Confidence 5543332111100000 000112222221 233456677788753 2334333333333322 234433
Q ss_pred EccCCCCCCCCCCCCchHHH---HH--hcCCceeeeecCh---Hhhhccccccccccc----CChhHHHHHHHhCCceec
Q 012587 303 IRPDLISGKDGENQIPEELL---EA--TKERGCIAGWVPQ---EEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMIC 370 (460)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~---~~--~~~n~~~~~~vp~---~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~ 370 (460)
++..... | ...+.+. ++ ..+|+.+.+++|+ ..++..+++ +|.- |...++.||+++|+|+|+
T Consensus 282 ~G~~~~~--g---~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~ 354 (438)
T 3c48_A 282 CGGPSGP--N---ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIA 354 (438)
T ss_dssp ECCBC-----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEE
T ss_pred EeCCCCC--C---cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEe
Confidence 3320000 0 1112222 11 2468999999986 567788887 5543 335689999999999998
Q ss_pred ccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHH----HHHHHHHHHH
Q 012587 371 WPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEF----MESADRMANL 428 (460)
Q Consensus 371 ~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~----~~~a~~l~~~ 428 (460)
.+. ......+ +..+.|..+ ...+.+++.++|.++++| ++. .+++++..+.
T Consensus 355 ~~~----~~~~e~i-~~~~~g~~~-~~~d~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 355 ARV----GGLPIAV-AEGETGLLV-DGHSPHAWADALATLLDD--DETRIRMGEDAVEHART 408 (438)
T ss_dssp ESC----TTHHHHS-CBTTTEEEE-SSCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHH
T ss_pred cCC----CChhHHh-hCCCcEEEC-CCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHh
Confidence 753 3344455 344567777 445899999999999986 543 3444444444
No 30
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.33 E-value=9.2e-10 Score=108.50 Aligned_cols=357 Identities=11% Similarity=0.015 Sum_probs=170.6
Q ss_pred CCcEEEEEcCC-----CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHh---------hccc--cccccccCCCCceE
Q 012587 5 DHVHVAILPLP-----AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVI---------RHSS--DAFSRYMQIPGFQF 68 (460)
Q Consensus 5 ~~~~il~~~~~-----~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~---------~~~~--~~~~~~~~~~~~~~ 68 (460)
++|||++++.. ..|--.-...|+++|+++||+|+++++......-. +... ..... ..++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~gv~v 77 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEE---RGNLRI 77 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEE---ETTEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeecc---CCCceE
Confidence 46899999842 34555568899999999999999999532211000 0000 00000 235666
Q ss_pred EecCCCCCCCCCCCCCChHHH-HHHHHhhCcHHHHHHHHcC---CCCccEEEEcCCcc--hHHHHHHHhCCceEEEecch
Q 012587 69 KTLTDGLPRDHPRTPDKFPEL-VDSLNCATPPLLKEMVSDS---KSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~---~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~ 142 (460)
..++...-... ......... ...+.. ....+..+++.. ..+||+|.+..... .+..++...|+|+|......
T Consensus 78 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~ 155 (439)
T 3fro_A 78 YRIGGGLLDSE-DVYGPGWDGLIRKAVT-FGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRL 155 (439)
T ss_dssp EEEESGGGGCS-STTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCC
T ss_pred EEecchhcccc-ccccCCcchhhhhhHH-HHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccc
Confidence 66654111100 011111111 111111 112223333322 24999999875443 35667788999998876643
Q ss_pred hHHHHHHhhccccccCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcC
Q 012587 143 ACAFWSFHCIPDIIDAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS 222 (460)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~ 222 (460)
... .++... .....+... .. .......... ...++.++..+....+. ......- .
T Consensus 156 ~~~-----~~~~~~----------~~~~~~~~~-~~-~~~~~~~~~~------~~~ad~ii~~S~~~~~~-~~~~~~~-~ 210 (439)
T 3fro_A 156 NKS-----KLPAFY----------FHEAGLSEL-AP-YPDIDPEHTG------GYIADIVTTVSRGYLID-EWGFFRN-F 210 (439)
T ss_dssp CCC-----CEEHHH----------HHHTTCGGG-CC-SSEECHHHHH------HHHCSEEEESCHHHHHH-THHHHGG-G
T ss_pred ccc-----cCchHH----------hCccccccc-cc-cceeeHhhhh------hhhccEEEecCHHHHHH-Hhhhhhh-c
Confidence 210 000000 000000000 00 0000111111 24577777777543322 1111111 1
Q ss_pred CCceeEeCccccccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcc--cCCHHHHHHHHHHHhh----CC
Q 012587 223 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA--VMSRDQLIEFYYGLVH----SK 296 (460)
Q Consensus 223 ~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~--~~~~~~~~~~~~al~~----~~ 296 (460)
..++..+..-.......+ .... .........+.+-+.. +++ .+++..|+.. ....+.+-..+..+.. .+
T Consensus 211 ~~~i~vi~ngvd~~~~~~-~~~~--~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~ 285 (439)
T 3fro_A 211 EGKITYVFNGIDCSFWNE-SYLT--GSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE 285 (439)
T ss_dssp TTSEEECCCCCCTTTSCG-GGSC--SCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG
T ss_pred CCceeecCCCCCchhcCc-cccc--chhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHHHHhcccCCC
Confidence 234444433221111000 0000 0000012223333332 234 6778888876 3345555555555544 23
Q ss_pred CcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecChH---hhhcccccccccc----cCChhHHHHHHHhCC
Q 012587 297 KSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQE---EVLAHSAVGGFLT----HCGWNSTLESIVAGM 366 (460)
Q Consensus 297 ~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~~---~il~~~~~~~~I~----HGG~gs~~eal~~Gv 366 (460)
.+++++ +. |.. .....+. ++.++++.+.+|+++. .++..+++ +|. -|-..++.||+++|+
T Consensus 286 ~~l~i~-G~------g~~-~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~ 355 (439)
T 3fro_A 286 MRFIII-GK------GDP-ELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGA 355 (439)
T ss_dssp EEEEEE-CC------CCH-HHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTC
T ss_pred eEEEEE-cC------CCh-hHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCC
Confidence 444443 21 110 0011121 2234444456889975 46788887 552 233479999999999
Q ss_pred ceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh-H
Q 012587 367 PMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV-E 413 (460)
Q Consensus 367 P~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~-~ 413 (460)
|+|+... ......+ +. |.|..+ ...+.+++.++|.++++ +
T Consensus 356 Pvi~s~~----~~~~e~~-~~-~~g~~~-~~~d~~~la~~i~~ll~~~ 396 (439)
T 3fro_A 356 IPIASAV----GGLRDII-TN-ETGILV-KAGDPGELANAILKALELS 396 (439)
T ss_dssp EEEEESS----THHHHHC-CT-TTCEEE-CTTCHHHHHHHHHHHHHHT
T ss_pred CeEEcCC----CCcceeE-Ec-CceEEe-CCCCHHHHHHHHHHHHhcC
Confidence 9998643 3344444 33 678777 45689999999999998 5
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.33 E-value=1.6e-11 Score=119.19 Aligned_cols=327 Identities=13% Similarity=0.056 Sum_probs=168.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCC-eEEEEeCccch---hHHhhccccccccccCCCCceE-EecCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGI-KITFLNTEHYY---DRVIRHSSDAFSRYMQIPGFQF-KTLTDGLPRDHPR 81 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH-~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (460)
|||++++. +.++......|+++|+++|+ ++.++.+.... ....+..+ +.+ ..++- ..
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~--~~---- 62 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFS-----------IVPDYDLNI--MQ---- 62 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHHT-----------CCCSEECCC--CS----
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHcC-----------CCCCcceec--CC----
Confidence 68998764 45667778899999999995 87765542221 22222111 222 22221 00
Q ss_pred CCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC---cchHHHHHHHhCCceEEEecchhHHHHHHhhccccccC
Q 012587 82 TPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY---MSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDA 158 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~---~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 158 (460)
........... ....+..++++. +||+|++... .+.+..+|..+|+|+|.+..... . ..
T Consensus 63 ~~~~~~~~~~~----~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-------~-~~---- 124 (384)
T 1vgv_A 63 PGQGLTEITCR----ILEGLKPILAEF--KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-------T-GD---- 124 (384)
T ss_dssp TTSCHHHHHHH----HHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-------C-SC----
T ss_pred CCccHHHHHHH----HHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-------c-cc----
Confidence 11222221111 224567778887 9999997532 22456778899999987543210 0 00
Q ss_pred CCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCcccccc
Q 012587 159 GELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPLNAHL 236 (460)
Q Consensus 159 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~~~~~ 236 (460)
. ...+.....+.. ....++.++..+...-+ ....... .++..+|......
T Consensus 125 ---------------~-------~~~~~~~~~~~~-~~~~~d~ii~~s~~~~~-----~l~~~g~~~~~i~vi~n~~~d~ 176 (384)
T 1vgv_A 125 ---------------L-------YSPWPEEANRTL-TGHLAMYHFSPTETSRQ-----NLLRENVADSRIFITGNTVIDA 176 (384)
T ss_dssp ---------------T-------TSSTTHHHHHHH-HHTTCSEEEESSHHHHH-----HHHHTTCCGGGEEECCCHHHHH
T ss_pred ---------------c-------cCCCchHhhHHH-HHhhccEEEcCcHHHHH-----HHHHcCCChhhEEEeCChHHHH
Confidence 0 000001111111 01346777777643221 1111011 2466666432111
Q ss_pred ccCCCccccCCCCccccchhhhhhhh-cCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCCCC
Q 012587 237 KVRIPEKTYSSSSLWKIDRSCMAWLD-KQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLISG 310 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~ 310 (460)
....++. .........++.+.+. ..+++++|+++.|+...... .+..++++++.+ +.++++..+.+
T Consensus 177 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~---- 248 (384)
T 1vgv_A 177 LLWVRDQ---VMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN---- 248 (384)
T ss_dssp HHHHHHH---TTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC----
T ss_pred HHhhhhc---cccchhhhHHHHHhccccCCCCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC----
Confidence 0000000 0000000011222221 11346778888887654322 234444444432 34555533210
Q ss_pred CCCCCCCchHHHHHh--cCCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHH
Q 012587 311 KDGENQIPEELLEAT--KERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVG 385 (460)
Q Consensus 311 ~~~~~~~~~~~~~~~--~~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~ 385 (460)
......+.+.. .+|+.+.+++++ ..+++.+++ +|+.+| +++.||+++|+|+|+.+..++..+ +.
T Consensus 249 ----~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v 317 (384)
T 1vgv_A 249 ----PNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AV 317 (384)
T ss_dssp ----HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HH
T ss_pred ----HHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hh
Confidence 00112222211 258888777764 677889998 888875 348899999999999987444332 33
Q ss_pred hhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 386 EVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 386 e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+ .|.|..++. +.++|.+++.++++| ++.+++
T Consensus 318 ~-~g~g~lv~~--d~~~la~~i~~ll~d--~~~~~~ 348 (384)
T 1vgv_A 318 T-AGTVRLVGT--DKQRIVEEVTRLLKD--ENEYQA 348 (384)
T ss_dssp H-HTSEEEECS--SHHHHHHHHHHHHHC--HHHHHH
T ss_pred h-CCceEEeCC--CHHHHHHHHHHHHhC--hHHHhh
Confidence 3 488888843 899999999999987 654443
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.32 E-value=3.9e-10 Score=110.04 Aligned_cols=316 Identities=14% Similarity=0.083 Sum_probs=163.7
Q ss_pred CCCCcEEEEEcCC---C-CCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 3 KQDHVHVAILPLP---A-VGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 3 ~~~~~~il~~~~~---~-~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
..+||||++++.. . .|.-.-...++++|.++||+|++++.......+.+... ..+ .+..++..
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--------~~~-~~~~~~~~---- 83 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV--------SGG-KAVPIPYN---- 83 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE--------ECC-CCC---------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc--------cCC-cEEecccc----
Confidence 3568999999852 2 45567889999999999999999997443211110000 000 11111100
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEecchhHHHHHHhhccccc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (460)
....... +.......+.+++++. +||+|++..... .+..++...|+|+|...........
T Consensus 84 -----~~~~~~~--~~~~~~~~l~~~l~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~--------- 145 (406)
T 2gek_A 84 -----GSVARLR--FGPATHRKVKKWIAEG--DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSL--------- 145 (406)
T ss_dssp --------------CCHHHHHHHHHHHHHH--CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHH---------
T ss_pred -----CCccccc--ccHHHHHHHHHHHHhc--CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhh---------
Confidence 0000000 0000123456667765 999999776544 3566677789999886554211000
Q ss_pred cCCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHh-hhhcCCCEEEEcChhhhchhHHHHHhhcCC-CceeEeCcccc
Q 012587 157 DAGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARET-RLSAHADGLILNTFEDLEGPILSQIRNHSC-PNIYSIGPLNA 234 (460)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~le~p~~~~~~~~~~-~~~~~vG~~~~ 234 (460)
......+.. .....++.+++.+....+. ...... .++ .+.....
T Consensus 146 ----------------------------~~~~~~~~~~~~~~~~d~ii~~s~~~~~~-----~~~~~~~~~~-vi~~~v~ 191 (406)
T 2gek_A 146 ----------------------------TLSVFQGILRPYHEKIIGRIAVSDLARRW-----QMEALGSDAV-EIPNGVD 191 (406)
T ss_dssp ----------------------------HHHHHHSTTHHHHTTCSEEEESSHHHHHH-----HHHHHSSCEE-ECCCCBC
T ss_pred ----------------------------hHHHHHHHHHHHHhhCCEEEECCHHHHHH-----HHHhcCCCcE-EecCCCC
Confidence 000000000 2235677777777543221 111011 233 3333221
Q ss_pred ccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCc-c-cCCHHHHHHHHHHHhhC--CCcEEEEEccCCCCC
Q 012587 235 HLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSI-A-VMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISG 310 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~-~-~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~ 310 (460)
..... .... - .. ......+++..|+. . ....+.+...+..+.+. +.+++++ +.
T Consensus 192 ~~~~~------------~~~~-~---~~-~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~-G~----- 248 (406)
T 2gek_A 192 VASFA------------DAPL-L---DG-YPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV-GR----- 248 (406)
T ss_dssp HHHHH------------TCCC-C---TT-CSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE-SC-----
T ss_pred hhhcC------------CCch-h---hh-ccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE-cC-----
Confidence 11000 0000 0 00 00112466777877 4 23344443344444332 4454443 21
Q ss_pred CCCCCCCchHHHHH---hcCCceeeeecCh---Hhhhcccccccccc----cCCh-hHHHHHHHhCCceecccccccchh
Q 012587 311 KDGENQIPEELLEA---TKERGCIAGWVPQ---EEVLAHSAVGGFLT----HCGW-NSTLESIVAGMPMICWPSFADQQI 379 (460)
Q Consensus 311 ~~~~~~~~~~~~~~---~~~n~~~~~~vp~---~~il~~~~~~~~I~----HGG~-gs~~eal~~GvP~l~~P~~~DQ~~ 379 (460)
+ .. +.+.+. ..+|+.+.+++++ ..++..+++ +|. +.|. .++.||+++|+|+|+.+. ..
T Consensus 249 -~---~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~ 317 (406)
T 2gek_A 249 -G---DE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DA 317 (406)
T ss_dssp -S---CH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HH
T ss_pred -C---cH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----Cc
Confidence 1 11 233321 2468888999997 578889998 552 3444 589999999999998765 44
Q ss_pred hHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 380 NSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 380 na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
....+ +..+.|..+ ..-+.+++.++|.++++| +..+++
T Consensus 318 ~~e~i-~~~~~g~~~-~~~d~~~l~~~i~~l~~~--~~~~~~ 355 (406)
T 2gek_A 318 FRRVL-ADGDAGRLV-PVDDADGMAAALIGILED--DQLRAG 355 (406)
T ss_dssp HHHHH-TTTTSSEEC-CTTCHHHHHHHHHHHHHC--HHHHHH
T ss_pred HHHHh-cCCCceEEe-CCCCHHHHHHHHHHHHcC--HHHHHH
Confidence 55556 444567766 445889999999999987 554443
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.32 E-value=7.9e-11 Score=113.84 Aligned_cols=324 Identities=12% Similarity=0.056 Sum_probs=166.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-C-CeEEEEeCccchhHHhhccccccccccCCCCceE-EecCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA-G-IKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQF-KTLTDGLPRDHP 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-G-H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (460)
+++|||++++ ++.++......++++|+++ | |+|.+++++...+...+... ..++.. ..++-.. +
T Consensus 6 ~~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~--- 72 (375)
T 3beo_A 6 TERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLS--------IFGITPDFDLNIMK-D--- 72 (375)
T ss_dssp SSCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHH--------HHTCCCSEECCCCC-T---
T ss_pred CcCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHH--------HcCCCCccccccCC-C---
Confidence 4458999997 4467777888999999987 5 88887776443332221100 001211 1111100 0
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhHHHHHHhhcccccc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIID 157 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 157 (460)
..+....... ....+..++++. +||+|++..... .+..+|...|+|+|.+.... .. ..
T Consensus 73 --~~~~~~~~~~----~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-------~~-~~--- 133 (375)
T 3beo_A 73 --RQTLIDITTR----GLEGLDKVMKEA--KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-------RT-WD--- 133 (375)
T ss_dssp --TCCHHHHHHH----HHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-------CC-SC---
T ss_pred --cccHHHHHHH----HHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-------cc-cc---
Confidence 1122111111 223456777776 999999854322 34567889999998643211 00 00
Q ss_pred CCCCCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCcc-cc
Q 012587 158 AGELPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPL-NA 234 (460)
Q Consensus 158 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~-~~ 234 (460)
.+ . .......+. ... ..++.++..+...-+ ....... .++..+|.. ..
T Consensus 134 ----------------~~-~--~~~~~~~~~---~~~--~~~d~ii~~s~~~~~-----~~~~~g~~~~~i~vi~n~~~d 184 (375)
T 3beo_A 134 ----------------KY-S--PYPEEMNRQ---LTG--VMADLHFSPTAKSAT-----NLQKENKDESRIFITGNTAID 184 (375)
T ss_dssp ----------------TT-S--STTHHHHHH---HHH--HHCSEEEESSHHHHH-----HHHHTTCCGGGEEECCCHHHH
T ss_pred ----------------cc-C--CChhHhhhh---HHh--hhhheeeCCCHHHHH-----HHHHcCCCcccEEEECChhHh
Confidence 00 0 000011111 111 236677776643221 1111011 246666643 21
Q ss_pred ccccCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhC-----CCcEEEEEccCCCC
Q 012587 235 HLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLIS 309 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~ 309 (460)
........ ....++.+-+ +++++|+++.|....... .+..++++++.+ +.++++ +.
T Consensus 185 ~~~~~~~~---------~~~~~~~~~~---~~~~~vl~~~gr~~~~~K-~~~~li~a~~~l~~~~~~~~~i~--~~---- 245 (375)
T 3beo_A 185 ALKTTVKE---------TYSHPVLEKL---GNNRLVLMTAHRRENLGE-PMRNMFRAIKRLVDKHEDVQVVY--PV---- 245 (375)
T ss_dssp HHHHHCCS---------SCCCHHHHTT---TTSEEEEEECCCGGGTTH-HHHHHHHHHHHHHHHCTTEEEEE--EC----
T ss_pred hhhhhhhh---------hhhHHHHHhc---cCCCeEEEEecccccchh-HHHHHHHHHHHHHhhCCCeEEEE--eC----
Confidence 11000000 0011121111 245677788887653322 234455555432 344433 21
Q ss_pred CCCCCCCCchHHHHHhc--CCceeeeecCh---HhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHH
Q 012587 310 GKDGENQIPEELLEATK--ERGCIAGWVPQ---EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFV 384 (460)
Q Consensus 310 ~~~~~~~~~~~~~~~~~--~n~~~~~~vp~---~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~ 384 (460)
+....+...+.+... +|+.+.+++++ ..++..+++ +|+.. .+.+.||+++|+|+|+....+... ..+
T Consensus 246 --g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~s-g~~~lEA~a~G~Pvi~~~~~~~~~---e~v 317 (375)
T 3beo_A 246 --HMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDS-GGVQEEAPSLGVPVLVLRDTTERP---EGI 317 (375)
T ss_dssp --CSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECC-HHHHHHHHHHTCCEEECSSCCSCH---HHH
T ss_pred --CCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECC-CChHHHHHhcCCCEEEecCCCCCc---eee
Confidence 111011122222222 68888777775 567888887 88776 355889999999999885433332 234
Q ss_pred HhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 385 GEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 385 ~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+ .|.|..++ . +.++|.+++.++++| ++.+++
T Consensus 318 -~-~g~g~~v~-~-d~~~la~~i~~ll~~--~~~~~~ 348 (375)
T 3beo_A 318 -E-AGTLKLAG-T-DEETIFSLADELLSD--KEAHDK 348 (375)
T ss_dssp -H-TTSEEECC-S-CHHHHHHHHHHHHHC--HHHHHH
T ss_pred -c-CCceEEcC-C-CHHHHHHHHHHHHhC--hHhHhh
Confidence 3 47887774 3 899999999999997 655443
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.26 E-value=9.2e-09 Score=103.41 Aligned_cols=85 Identities=15% Similarity=0.116 Sum_probs=61.3
Q ss_pred cCCceeeeecCh---Hhhhccc----ccccccc---c-CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeee
Q 012587 326 KERGCIAGWVPQ---EEVLAHS----AVGGFLT---H-CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 326 ~~n~~~~~~vp~---~~il~~~----~~~~~I~---H-GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~ 394 (460)
.+++.+.+++|+ ..++..+ ++ +|. + |-..++.||+++|+|+|+... ......+ +....|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 468999999986 4567788 87 552 2 334689999999999998753 2344445 343467777
Q ss_pred cCCcchHHHHHHHHHHHhHhHHHHHH
Q 012587 395 KDLCDRNIVEKAVNDLMVERKEEFME 420 (460)
Q Consensus 395 ~~~~~~~~l~~~i~~~l~~~~~~~~~ 420 (460)
..-+.+++.++|.++++| +..++
T Consensus 407 -~~~d~~~la~~i~~ll~~--~~~~~ 429 (499)
T 2r60_A 407 -DPEDPEDIARGLLKAFES--EETWS 429 (499)
T ss_dssp -CTTCHHHHHHHHHHHHSC--HHHHH
T ss_pred -CCCCHHHHHHHHHHHHhC--HHHHH
Confidence 446889999999999997 55443
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.21 E-value=6.6e-10 Score=105.95 Aligned_cols=125 Identities=15% Similarity=0.113 Sum_probs=80.1
Q ss_pred EEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChH---hhhccccc
Q 012587 270 IYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQE---EVLAHSAV 346 (460)
Q Consensus 270 V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~---~il~~~~~ 346 (460)
+++..|+... ...+..++++++.++.+++++- . |.....-..+.++.++|+.+.+|+++. .++..+++
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~G-~------g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLAG-P------AWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEES-C------CCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEEe-C------cccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 4455677652 2234556666666677766543 2 110001111223344799999999975 78889998
Q ss_pred cccc--cc-----------CC-hhHHHHHHHhCCceecccccccchhhHHHHHhh--hceeeeecCCcchHHHHHHHHHH
Q 012587 347 GGFL--TH-----------CG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEV--WKLGLDIKDLCDRNIVEKAVNDL 410 (460)
Q Consensus 347 ~~~I--~H-----------GG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~--~G~g~~~~~~~~~~~l~~~i~~~ 410 (460)
+| +. -| ..++.||+++|+|+|+.... .+...+ +. -+.|..+ .. +.+++.++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~-~~-d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGT-DF-APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSS-CC-CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEc-CC-CHHHHHHHHHHH
Confidence 55 22 33 46899999999999998752 344455 34 3466666 45 999999999999
Q ss_pred Hh
Q 012587 411 MV 412 (460)
Q Consensus 411 l~ 412 (460)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 86
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.17 E-value=4.6e-09 Score=101.20 Aligned_cols=140 Identities=15% Similarity=0.161 Sum_probs=89.8
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHhhCCC----cE-EEEEccCCCCCCCCCCCCchHHH---HH--hcCCceeeeec
Q 012587 266 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKK----SF-LWVIRPDLISGKDGENQIPEELL---EA--TKERGCIAGWV 335 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~----~~-i~~~~~~~~~~~~~~~~~~~~~~---~~--~~~n~~~~~~v 335 (460)
+++.+++..|+.... ..+..++++++.+.. ++ ++.++. +. .+.+. ++ ..+|+.+.++.
T Consensus 194 ~~~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~l~i~G~------g~----~~~~~~~~~~~~~~~~v~~~g~~ 261 (374)
T 2iw1_A 194 EQQNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFVVGQ------DK----PRKFEALAEKLGVRSNVHFFSGR 261 (374)
T ss_dssp TTCEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEEESS------SC----CHHHHHHHHHHTCGGGEEEESCC
T ss_pred CCCeEEEEeccchhh--cCHHHHHHHHHHhHhccCCceEEEEEcC------CC----HHHHHHHHHHcCCCCcEEECCCc
Confidence 345666778876532 234445666665432 22 333432 11 12222 11 24688888876
Q ss_pred Ch-Hhhhcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHH
Q 012587 336 PQ-EEVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDL 410 (460)
Q Consensus 336 p~-~~il~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~ 410 (460)
.+ ..++..+++ +|. -|...++.||+++|+|+|+... ..+...+ +..+.|..+....+.+++.+++.++
T Consensus 262 ~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~~~~~~l~~~i~~l 334 (374)
T 2iw1_A 262 NDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEPFSQEQLNEVLRKA 334 (374)
T ss_dssp SCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSSCCHHHHHHHHHHH
T ss_pred ccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCCCCHHHHHHHHHHH
Confidence 54 778888997 664 4667899999999999999764 3455666 4567888884356899999999999
Q ss_pred HhHhHHHHHHHHHHHH
Q 012587 411 MVERKEEFMESADRMA 426 (460)
Q Consensus 411 l~~~~~~~~~~a~~l~ 426 (460)
++| ++.+++..+-+
T Consensus 335 ~~~--~~~~~~~~~~~ 348 (374)
T 2iw1_A 335 LTQ--SPLRMAWAENA 348 (374)
T ss_dssp HHC--HHHHHHHHHHH
T ss_pred HcC--hHHHHHHHHHH
Confidence 987 65554443333
No 37
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.13 E-value=7.4e-08 Score=93.58 Aligned_cols=319 Identities=13% Similarity=0.099 Sum_probs=162.8
Q ss_pred cEEEEEcCCCC-CCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAV-GHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 7 ~~il~~~~~~~-Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
.++....+|.. |.-.-...|+++|.++||+|++++...... .... ..++.+..++...... ....
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~~----------~~~i~~~~~~~~~~~~---~~~~ 81 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNKV----------YPNIYFHEVTVNQYSV---FQYP 81 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----CC----------CTTEEEECCCCC-------CCSC
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cccc----------CCceEEEecccccccc---cccc
Confidence 47888888754 455667799999999999999999743211 1111 3346665554211000 0000
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHH-Hh--CCceEEEecchhHHHHHHhhccccccCCC
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAR-EV--GVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~-~l--giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
.. .+. ....+.+++++. +||+|++..... ....++. .+ ++|+|......... ....
T Consensus 82 ~~-~~~-----~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-----~~~~------ 142 (394)
T 2jjm_A 82 PY-DLA-----LASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT-----VLGS------ 142 (394)
T ss_dssp CH-HHH-----HHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----TTTT------
T ss_pred cc-cHH-----HHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-----ccCC------
Confidence 11 111 123456666666 999999874432 2233444 33 59988765442110 0000
Q ss_pred CCCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC---CceeEeCccccccc
Q 012587 161 LPIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC---PNIYSIGPLNAHLK 237 (460)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~---~~~~~vG~~~~~~~ 237 (460)
........+. ....++.++..+....+ .... .. .++..+........
T Consensus 143 ----------------------~~~~~~~~~~--~~~~ad~ii~~s~~~~~-----~~~~-~~~~~~~~~vi~ngv~~~~ 192 (394)
T 2jjm_A 143 ----------------------DPSLNNLIRF--GIEQSDVVTAVSHSLIN-----ETHE-LVKPNKDIQTVYNFIDERV 192 (394)
T ss_dssp ----------------------CTTTHHHHHH--HHHHSSEEEESCHHHHH-----HHHH-HTCCSSCEEECCCCCCTTT
T ss_pred ----------------------CHHHHHHHHH--HHhhCCEEEECCHHHHH-----HHHH-hhCCcccEEEecCCccHHh
Confidence 0000111111 12557778877754322 1122 11 24555543332111
Q ss_pred cCCCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCccc-CCHHHHHHHHHHHhh-CCCcEEEEEccCCCCCCCCCC
Q 012587 238 VRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVH-SKKSFLWVIRPDLISGKDGEN 315 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~ 315 (460)
... .....+.+-+. .+++..+++..|+... ...+.+-..+..+.+ .+.++++ ++. +
T Consensus 193 ~~~-----------~~~~~~~~~~~-~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i-~G~------g--- 250 (394)
T 2jjm_A 193 YFK-----------RDMTQLKKEYG-ISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLL-VGD------G--- 250 (394)
T ss_dssp CCC-----------CCCHHHHHHTT-CC---CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEE-ECC------C---
T ss_pred cCC-----------cchHHHHHHcC-CCCCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEE-ECC------c---
Confidence 100 01112222222 1123445567787653 233333333333332 3455444 332 1
Q ss_pred CCchHHHHH-----hcCCceeeeecCh-Hhhhccccccccc----ccCChhHHHHHHHhCCceecccccccchhhHHHHH
Q 012587 316 QIPEELLEA-----TKERGCIAGWVPQ-EEVLAHSAVGGFL----THCGWNSTLESIVAGMPMICWPSFADQQINSRFVG 385 (460)
Q Consensus 316 ~~~~~~~~~-----~~~n~~~~~~vp~-~~il~~~~~~~~I----~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~ 385 (460)
...+.+.+. ..+|+.+.++..+ ..++..+++ +| .-|...++.||+++|+|+|+.+.. .....+
T Consensus 251 ~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v- 323 (394)
T 2jjm_A 251 PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVI- 323 (394)
T ss_dssp TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTC-
T ss_pred hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHh-
Confidence 111222221 1357888887653 788889998 66 456668999999999999987643 233334
Q ss_pred hhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHH
Q 012587 386 EVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFME 420 (460)
Q Consensus 386 e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 420 (460)
+..+.|..+ ..-+.+++.++|.++++| ++.++
T Consensus 324 ~~~~~g~~~-~~~d~~~la~~i~~l~~~--~~~~~ 355 (394)
T 2jjm_A 324 QHGDTGYLC-EVGDTTGVADQAIQLLKD--EELHR 355 (394)
T ss_dssp CBTTTEEEE-CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred hcCCceEEe-CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 333567766 445889999999999987 55443
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.11 E-value=2.2e-09 Score=103.78 Aligned_cols=317 Identities=11% Similarity=0.058 Sum_probs=169.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh-HHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
+|.|++++ .|++-.+.=+.+|.++|.++ .++.++.+...++ .+.+.. ..++.+. -|+ +.-+. ..
T Consensus 8 ~~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~---------~~~~~i~-~~~-~~l~~--~~ 72 (385)
T 4hwg_A 8 HMLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF---------FDDMGIR-KPD-YFLEV--AA 72 (385)
T ss_dssp CCCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH---------HC-CCCC-CCS-EECCC--CC
T ss_pred hhhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH---------HhhCCCC-CCc-eecCC--CC
Confidence 56777665 57777788888888888887 8988887766655 332211 0112210 111 00011 12
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEE--cCCcchHHHHHHHhCCceEEEecchhHHHHHHhhccccccCCCC
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIIT--DGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
.+....... ....+.+++++. +||+|+. |..+.++..+|.++|||++.+....
T Consensus 73 ~~~~~~~~~----~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl------------------- 127 (385)
T 4hwg_A 73 DNTAKSIGL----VIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN------------------- 127 (385)
T ss_dssp CCSHHHHHH----HHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-------------------
T ss_pred CCHHHHHHH----HHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-------------------
Confidence 233333332 335678888887 9999886 3333345889999999977643220
Q ss_pred CCCCCccCCCCCCcccCCCCCChHHHHHHHHhhhhcCCCEEEEcChhhhchhHHHHHhhcCC--CceeEeCccccccccC
Q 012587 162 PIKGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC--PNIYSIGPLNAHLKVR 239 (460)
Q Consensus 162 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~p~~~~~~~~~~--~~~~~vG~~~~~~~~~ 239 (460)
+. ++. .......+.+. . .-++.++..+-.. .+.+..... .+++.+|-........
T Consensus 128 ------rs------~~~-~~pee~nR~~~---~--~~a~~~~~~te~~-----~~~l~~~G~~~~~I~vtGnp~~D~~~~ 184 (385)
T 4hwg_A 128 ------RC------FDQ-RVPEEINRKII---D--HISDVNITLTEHA-----RRYLIAEGLPAELTFKSGSHMPEVLDR 184 (385)
T ss_dssp ------CC------SCT-TSTHHHHHHHH---H--HHCSEEEESSHHH-----HHHHHHTTCCGGGEEECCCSHHHHHHH
T ss_pred ------cc------ccc-cCcHHHHHHHH---H--hhhceeecCCHHH-----HHHHHHcCCCcCcEEEECCchHHHHHH
Confidence 00 000 00001111111 1 2345555555321 111122022 3588888432211100
Q ss_pred CCccccCCCCccccchhhhhhhhcCCCCcEEEEEecCcccCCH-HHHHHHHHHHhhC----CCcEEEEEccCCCCCCCCC
Q 012587 240 IPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSR-DQLIEFYYGLVHS----KKSFLWVIRPDLISGKDGE 314 (460)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~GS~~~~~~-~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~ 314 (460)
..+. ...+++.+-+.. ++++.|+++.|...+.+. ..+..+++++..+ +..+|+...+
T Consensus 185 ~~~~--------~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p--------- 246 (385)
T 4hwg_A 185 FMPK--------ILKSDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP--------- 246 (385)
T ss_dssp HHHH--------HHHCCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH---------
T ss_pred hhhh--------cchhHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh---------
Confidence 0000 011223333332 235788898887643332 3455666666543 5667776521
Q ss_pred CCCchHHHHH---h--cCCceeeeecC---hHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhHHHHHh
Q 012587 315 NQIPEELLEA---T--KERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGE 386 (460)
Q Consensus 315 ~~~~~~~~~~---~--~~n~~~~~~vp---~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e 386 (460)
.+...+.+. . .+|+.+.+.++ ...+++.+++ +|+-.|. .+.||.++|+|+|+++...+.++ .+
T Consensus 247 -~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-- 317 (385)
T 4hwg_A 247 -RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-- 317 (385)
T ss_dssp -HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH--
T ss_pred -HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh--
Confidence 111111111 1 24777766555 4578889997 8888775 46999999999999987554332 24
Q ss_pred hhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 387 VWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 387 ~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
+.|.++.+. .+.+.|.+++.++|+|
T Consensus 318 ~~G~~~lv~--~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 318 DAGTLIMSG--FKAERVLQAVKTITEE 342 (385)
T ss_dssp HHTCCEECC--SSHHHHHHHHHHHHTT
T ss_pred hcCceEEcC--CCHHHHHHHHHHHHhC
Confidence 358776663 4899999999999986
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.04 E-value=1.2e-07 Score=92.77 Aligned_cols=84 Identities=15% Similarity=0.008 Sum_probs=61.4
Q ss_pred cCCceeeeecC------hHhhhcccccccccccC----ChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec
Q 012587 326 KERGCIAGWVP------QEEVLAHSAVGGFLTHC----GWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 326 ~~n~~~~~~vp------~~~il~~~~~~~~I~HG----G~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~ 395 (460)
.+++.+.+|++ -..++..+++ +|.-. ...++.||+++|+|+|+.+. ..+...+ +..+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 46888888775 2567788887 55433 45789999999999999764 3344555 3445777774
Q ss_pred CCcchHHHHHHHHHHHhHhHHHHHHH
Q 012587 396 DLCDRNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+.+++.++|.++++| +..+++
T Consensus 365 ---d~~~la~~i~~ll~~--~~~~~~ 385 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKH--PEVSKE 385 (416)
T ss_dssp ---SHHHHHHHHHHHHHC--HHHHHH
T ss_pred ---CHHHHHHHHHHHHhC--HHHHHH
Confidence 899999999999987 655443
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.72 E-value=4.7e-06 Score=83.15 Aligned_cols=133 Identities=10% Similarity=0.036 Sum_probs=79.7
Q ss_pred EEEEEecCcccC-CHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCce-eeeecCh---Hhh
Q 012587 269 VIYVSFGSIAVM-SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL---EATKERGC-IAGWVPQ---EEV 340 (460)
Q Consensus 269 ~V~vs~GS~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~-~~~~vp~---~~i 340 (460)
.+++..|++... ..+.+...+..+.+.+.+++++-. |. ....+.+. ++.++|+. +.++ +. ..+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~-------g~-~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~ 362 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGA-------GD-VALEGALLAAASRHHGRVGVAIGY-NEPLSHLM 362 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEEC-------BC-HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeC-------Cc-hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHH
Confidence 367788887632 334433333334334666666542 11 00112222 23346887 5677 54 357
Q ss_pred hcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhh---------ceeeeecCCcchHHHHHHH
Q 012587 341 LAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVW---------KLGLDIKDLCDRNIVEKAV 407 (460)
Q Consensus 341 l~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~---------G~g~~~~~~~~~~~l~~~i 407 (460)
+..+++ +|. -|-..++.||+++|+|+|+... ......+ +.. +.|..+ ..-+.++|.++|
T Consensus 363 ~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-~~~d~~~la~~i 434 (485)
T 1rzu_A 363 QAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQF-SPVTLDGLKQAI 434 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-SSCSHHHHHHHH
T ss_pred HhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEe-CCCCHHHHHHHH
Confidence 888998 552 2334689999999999999764 2333344 332 467777 456889999999
Q ss_pred HHHH---hHhHHHHHH
Q 012587 408 NDLM---VERKEEFME 420 (460)
Q Consensus 408 ~~~l---~~~~~~~~~ 420 (460)
.+++ +| +..++
T Consensus 435 ~~ll~~~~~--~~~~~ 448 (485)
T 1rzu_A 435 RRTVRYYHD--PKLWT 448 (485)
T ss_dssp HHHHHHHTC--HHHHH
T ss_pred HHHHHHhCC--HHHHH
Confidence 9999 55 55444
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.63 E-value=1.8e-06 Score=90.64 Aligned_cols=78 Identities=14% Similarity=0.147 Sum_probs=52.0
Q ss_pred cCCceeeee----cChHhhhc----cccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeee
Q 012587 326 KERGCIAGW----VPQEEVLA----HSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD 393 (460)
Q Consensus 326 ~~n~~~~~~----vp~~~il~----~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~ 393 (460)
.+++.+.++ +|+.++.. .+++ +|.- |-..++.||+++|+|+|+.. -......+ +.-+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHH-ccCCcEEE
Confidence 367888774 44455544 4565 5532 33469999999999999964 33344445 34456777
Q ss_pred ecCCcchHHHHHHHHHHH
Q 012587 394 IKDLCDRNIVEKAVNDLM 411 (460)
Q Consensus 394 ~~~~~~~~~l~~~i~~~l 411 (460)
+ ..-+.+++.++|.+++
T Consensus 712 v-~p~D~e~LA~aI~~lL 728 (816)
T 3s28_A 712 I-DPYHGDQAADTLADFF 728 (816)
T ss_dssp E-CTTSHHHHHHHHHHHH
T ss_pred e-CCCCHHHHHHHHHHHH
Confidence 7 4458889999997776
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.61 E-value=0.00011 Score=74.73 Aligned_cols=89 Identities=12% Similarity=0.096 Sum_probs=63.6
Q ss_pred CCceeeeecCh---Hhhhccccccccc---ccCChhHHHHHHHhCCceecccccccchhh-HHHHHhhhceeeeecCCcc
Q 012587 327 ERGCIAGWVPQ---EEVLAHSAVGGFL---THCGWNSTLESIVAGMPMICWPSFADQQIN-SRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 327 ~n~~~~~~vp~---~~il~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~DQ~~n-a~~~~e~~G~g~~~~~~~~ 399 (460)
++|.+.+++|+ ..++..+++ +| ..|+..++.||+++|+|+|++|...=.... +..+ ...|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhcC--C
Confidence 67888999985 456788887 55 236678999999999999997753211222 3344 35677666633 8
Q ss_pred hHHHHHHHHHHHhHhHHHHHHHH
Q 012587 400 RNIVEKAVNDLMVERKEEFMESA 422 (460)
Q Consensus 400 ~~~l~~~i~~~l~~~~~~~~~~a 422 (460)
.+.+.+++.++++| +..+++.
T Consensus 509 ~~~la~~i~~l~~~--~~~~~~~ 529 (568)
T 2vsy_A 509 DAAFVAKAVALASD--PAALTAL 529 (568)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHH
T ss_pred HHHHHHHHHHHhcC--HHHHHHH
Confidence 89999999999997 6655443
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.60 E-value=2.3e-05 Score=78.09 Aligned_cols=136 Identities=10% Similarity=0.078 Sum_probs=79.5
Q ss_pred CcEEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCce-eeeecCh---H
Q 012587 267 QSVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELL---EATKERGC-IAGWVPQ---E 338 (460)
Q Consensus 267 ~~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~-~~~~vp~---~ 338 (460)
+..+++..|.+.. ...+.+...+..+.+.+.+++++-.+ .. .....+. ++.++++. +.++ +. .
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g-------~~-~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~ 361 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAG-------DP-VLQEGFLAAAAEYPGQVGVQIGY-HEAFSH 361 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEE-------CH-HHHHHHHHHHHHSTTTEEEEESC-CHHHHH
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCC-------ch-HHHHHHHHHHHhCCCcEEEeCCC-CHHHHH
Confidence 3445567777652 33344333333343346666655421 10 0112221 22346786 5677 53 3
Q ss_pred hhhcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhh---------ceeeeecCCcchHHHHH
Q 012587 339 EVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVW---------KLGLDIKDLCDRNIVEK 405 (460)
Q Consensus 339 ~il~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~---------G~g~~~~~~~~~~~l~~ 405 (460)
.++..+++ +|. -|...++.||+++|+|+|+... ......+ +.. +.|..+ ..-+.++|.+
T Consensus 362 ~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-~~~d~~~la~ 433 (485)
T 2qzs_A 362 RIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVF-EDSNAWSLLR 433 (485)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-CSSSHHHHHH
T ss_pred HHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEE-CCCCHHHHHH
Confidence 67888998 552 2334688999999999998754 2333444 332 467777 4568999999
Q ss_pred HHHHHH---hHhHHHHHHH
Q 012587 406 AVNDLM---VERKEEFMES 421 (460)
Q Consensus 406 ~i~~~l---~~~~~~~~~~ 421 (460)
+|.+++ +| ++.+++
T Consensus 434 ~i~~ll~~~~~--~~~~~~ 450 (485)
T 2qzs_A 434 AIRRAFVLWSR--PSLWRF 450 (485)
T ss_dssp HHHHHHHHHTS--HHHHHH
T ss_pred HHHHHHHHcCC--HHHHHH
Confidence 999999 55 554443
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.44 E-value=9.3e-05 Score=71.96 Aligned_cols=75 Identities=12% Similarity=0.021 Sum_probs=56.7
Q ss_pred hcCCceeeeecChH---hhhcccccccccc---cCC-hhHHHHHH-------HhCCceecccccccchhhHHHHHhhhce
Q 012587 325 TKERGCIAGWVPQE---EVLAHSAVGGFLT---HCG-WNSTLESI-------VAGMPMICWPSFADQQINSRFVGEVWKL 390 (460)
Q Consensus 325 ~~~n~~~~~~vp~~---~il~~~~~~~~I~---HGG-~gs~~eal-------~~GvP~l~~P~~~DQ~~na~~~~e~~G~ 390 (460)
..+|+.+.+++|+. .++..+++ +|. +-| ..++.||+ ++|+|+|+... + +.-..
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~ 329 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYK 329 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcc
Confidence 34689999999964 56788887 442 334 46789999 99999999754 4 34345
Q ss_pred eee-ecCCcchHHHHHHHHHHHhH
Q 012587 391 GLD-IKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 391 g~~-~~~~~~~~~l~~~i~~~l~~ 413 (460)
|.. + ..-+.++|.++|.++++|
T Consensus 330 G~l~v-~~~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 330 SRFGY-TPGNADSVIAAITQALEA 352 (406)
T ss_dssp SEEEE-CTTCHHHHHHHHHHHHHC
T ss_pred eEEEe-CCCCHHHHHHHHHHHHhC
Confidence 766 5 445889999999999987
No 45
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.43 E-value=5e-05 Score=73.86 Aligned_cols=83 Identities=12% Similarity=0.042 Sum_probs=55.4
Q ss_pred ceeeeecCh---Hhhhcccccccccc----cCChhHHHHHHHhCCceecccccccchhhHHHHHhhhce-----------
Q 012587 329 GCIAGWVPQ---EEVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKL----------- 390 (460)
Q Consensus 329 ~~~~~~vp~---~~il~~~~~~~~I~----HGG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~----------- 390 (460)
+.+.+|+|+ ..++..+++ +|. -|...++.||+++|+|+|+.... .....+ +. |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-SG-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-CT-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-cc-Ccccccccccccc
Confidence 555699994 556788887 552 23346899999999999986542 333333 22 22
Q ss_pred -----ee--eecCCcchHHHHHHHHHHHhHhHHHHHHHHH
Q 012587 391 -----GL--DIKDLCDRNIVEKAVNDLMVERKEEFMESAD 423 (460)
Q Consensus 391 -----g~--~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~ 423 (460)
|. .+ ...+.++|.++| ++++| +..+++..
T Consensus 328 ~~~~~G~~gl~-~~~d~~~la~~i-~l~~~--~~~~~~~~ 363 (413)
T 3oy2_A 328 VDDRDGIGGIE-GIIDVDDLVEAF-TFFKD--EKNRKEYG 363 (413)
T ss_dssp CTTTCSSCCEE-EECCHHHHHHHH-HHTTS--HHHHHHHH
T ss_pred cccccCcceee-CCCCHHHHHHHH-HHhcC--HHHHHHHH
Confidence 44 55 334899999999 99997 66554433
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.41 E-value=9.6e-07 Score=75.34 Aligned_cols=138 Identities=13% Similarity=0.049 Sum_probs=88.1
Q ss_pred EEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecCh---Hhhhc
Q 012587 270 IYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQ---EEVLA 342 (460)
Q Consensus 270 V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~---~~il~ 342 (460)
+++..|+... ...+..++++++.+ +.+++++-.+. ....+..... ...++|+.+.+|+++ ..++.
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~------~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFS------KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCC------TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCc------cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 4566777652 23355566777766 55665543211 1112222111 124569999999997 67888
Q ss_pred ccccccccc---cCC-hhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHH
Q 012587 343 HSAVGGFLT---HCG-WNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEF 418 (460)
Q Consensus 343 ~~~~~~~I~---HGG-~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~ 418 (460)
.+++ +|. +.| ..++.||+++|+|+|+... ..+...+ +..+.|..+ ..+.+++.++|.++++| +..
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~--~~d~~~l~~~i~~l~~~--~~~ 165 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV--NADVNEIIDAMKKVSKN--PDK 165 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE--CSCHHHHHHHHHHHHHC--TTT
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe--CCCHHHHHHHHHHHHhC--HHH
Confidence 8998 554 334 4599999999999998753 3444555 344567766 56899999999999986 544
Q ss_pred -HHHHHHHH
Q 012587 419 -MESADRMA 426 (460)
Q Consensus 419 -~~~a~~l~ 426 (460)
++++++.+
T Consensus 166 ~~~~~~~~a 174 (177)
T 2f9f_A 166 FKKDCFRRA 174 (177)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 55555444
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.25 E-value=0.00033 Score=67.19 Aligned_cols=95 Identities=13% Similarity=0.173 Sum_probs=65.1
Q ss_pred CceeeeecC-hHhhhcccccccccc---c--CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchH
Q 012587 328 RGCIAGWVP-QEEVLAHSAVGGFLT---H--CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRN 401 (460)
Q Consensus 328 n~~~~~~vp-~~~il~~~~~~~~I~---H--GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~ 401 (460)
++.+.++.. -..+++.+++ ++. . +|..++.||+++|+|+|.-|...+..+....+. +.|.++.. -+.+
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~-~~G~l~~~---~d~~ 334 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLE-KEGAGFEV---KNET 334 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHH-HTTCEEEC---CSHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHH-HCCCEEEe---CCHH
Confidence 344545444 3778888887 443 1 234789999999999998777777776666552 45777666 3789
Q ss_pred HHHHHHHHHHhH-hHHHHHHHHHHHHHH
Q 012587 402 IVEKAVNDLMVE-RKEEFMESADRMANL 428 (460)
Q Consensus 402 ~l~~~i~~~l~~-~~~~~~~~a~~l~~~ 428 (460)
+|.+++.++++| ....+.+++++..+.
T Consensus 335 ~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 335 ELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 999999999974 112466666665544
No 48
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.84 E-value=0.0048 Score=58.26 Aligned_cols=102 Identities=9% Similarity=-0.003 Sum_probs=65.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCc-eEEecCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGF-QFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 83 (460)
|||+++.....||+.-..++.++|+++ +.+|++++.+.+.+.+.. .+.+ ++..++.. .. .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~-----------~p~i~~v~~~~~~--~~----~ 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR-----------MPEVNEAIPMPLG--HG----A 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT-----------CTTEEEEEEC------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc-----------CCccCEEEEecCC--cc----c
Confidence 599999999999999999999999997 999999999765554432 2334 34444310 00 0
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEE
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
. ....+.++.+.+ ..+||++|.-........++...|+|...
T Consensus 64 ~------------~~~~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 L------------EIGERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------------CHHHHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred c------------chHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 112223344444 34899998433334566778888999743
No 49
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.83 E-value=0.0021 Score=60.88 Aligned_cols=106 Identities=17% Similarity=0.149 Sum_probs=71.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCce-EEecCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQ-FKTLTDGLPRDHP 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 80 (460)
..++||+++...+.||+.-+.++.++|+++ +.+|++++.+.+.+-+.. .+.++ ++.++..
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~-----------~p~vd~vi~~~~~------ 68 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY-----------NPNIDELIVVDKK------ 68 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS-----------CTTCSEEEEECCS------
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc-----------CCCccEEEEeCcc------
Confidence 356799999999999999999999999998 999999999666544432 33453 5555421
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCc-cEEEEcCCcchHHHHHHHhCCceEE
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPV-NCIITDGYMSRAIDAAREVGVSIIY 137 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p-D~vv~D~~~~~~~~~A~~lgiP~v~ 137 (460)
.....+..+. ..++++-+. ++ |++|.-........++...|+|...
T Consensus 69 ----~~~~~~~~~~----~l~~~Lr~~---~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 ----GRHNSISGLN----EVAREINAK---GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ----SHHHHHHHHH----HHHHHHHHH---CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ----cccccHHHHH----HHHHHHhhC---CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1111111111 222233333 89 9999765555667788899999755
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.55 E-value=0.00028 Score=66.52 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=81.3
Q ss_pred CceeeeecChHhh---hcccccccccccCCh---------hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec
Q 012587 328 RGCIAGWVPQEEV---LAHSAVGGFLTHCGW---------NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 328 n~~~~~~vp~~~i---l~~~~~~~~I~HGG~---------gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~ 395 (460)
|+.+.+|+|+.++ |..++.+++.+-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998665 445566444433333 35889999999999754 45677777 5789999994
Q ss_pred CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012587 396 DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 450 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 450 (460)
+.+++.+++..+..++...+++|+++.+++++. |-...+++.+.+.+|
T Consensus 290 ---~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ---SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 568888888887766567889999999999887 555555655555544
No 51
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.55 E-value=0.00086 Score=55.82 Aligned_cols=131 Identities=12% Similarity=0.129 Sum_probs=76.2
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhCC--CcE-EEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecCh---H
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHSK--KSF-LWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQ---E 338 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~---~ 338 (460)
+++++..|+.... ..+..++++++.+. .++ ++.++. +. ....+. ++.+.++.+ +|+|+ .
T Consensus 2 ~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~G~------g~---~~~~~~~~~~~~~~~v~~-g~~~~~~~~ 69 (166)
T 3qhp_A 2 PFKIAMVGRYSNE--KNQSVLIKAVALSKYKQDIVLLLKGK------GP---DEKKIKLLAQKLGVKAEF-GFVNSNELL 69 (166)
T ss_dssp CEEEEEESCCSTT--TTHHHHHHHHHTCTTGGGEEEEEECC------ST---THHHHHHHHHHHTCEEEC-CCCCHHHHH
T ss_pred ceEEEEEeccchh--cCHHHHHHHHHHhccCCCeEEEEEeC------Cc---cHHHHHHHHHHcCCeEEE-eecCHHHHH
Confidence 5677888887532 23455666666542 133 223321 11 112222 223347777 99986 4
Q ss_pred hhhcccccccccc----cCChhHHHHHHHhCC-ceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 339 EVLAHSAVGGFLT----HCGWNSTLESIVAGM-PMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 339 ~il~~~~~~~~I~----HGG~gs~~eal~~Gv-P~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
.++..+++ +|. -|...++.||+++|+ |+|.....+. ....+ +..+. .+ ..-+.+++.+++.++++|
T Consensus 70 ~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~-~~~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 70 EILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LF-EPNNAKDLSAKIDWWLEN 140 (166)
T ss_dssp HHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EE-CTTCHHHHHHHHHHHHHC
T ss_pred HHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EE-cCCCHHHHHHHHHHHHhC
Confidence 56788887 554 244569999999996 9999432221 11122 22222 23 446899999999999987
Q ss_pred hHHHHHHH
Q 012587 414 RKEEFMES 421 (460)
Q Consensus 414 ~~~~~~~~ 421 (460)
+..+++
T Consensus 141 --~~~~~~ 146 (166)
T 3qhp_A 141 --KLERER 146 (166)
T ss_dssp --HHHHHH
T ss_pred --HHHHHH
Confidence 554433
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.48 E-value=0.0012 Score=66.43 Aligned_cols=145 Identities=9% Similarity=0.015 Sum_probs=92.2
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEE--ccCCCCCCCCCCCCchHHH-HHhcCCceeeeecChHh---h
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVI--RPDLISGKDGENQIPEELL-EATKERGCIAGWVPQEE---V 340 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~vp~~~---i 340 (460)
..++|.+|++..+..++.++...+.+++.+..++|.. +.. . +....+-..+. .-+.+++.+.+.+|..+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~--~--g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS--N--GITHPYVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC--C--GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC--c--hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 3789999999999999999999999998877776643 211 0 11001111111 12346777888888654 4
Q ss_pred hccccccccc---ccCChhHHHHHHHhCCceecccccccc-hhhHHHHHhhhceeee-ecCCcchHHHHHHHHHHHhHhH
Q 012587 341 LAHSAVGGFL---THCGWNSTLESIVAGMPMICWPSFADQ-QINSRFVGEVWKLGLD-IKDLCDRNIVEKAVNDLMVERK 415 (460)
Q Consensus 341 l~~~~~~~~I---~HGG~gs~~eal~~GvP~l~~P~~~DQ-~~na~~~~e~~G~g~~-~~~~~~~~~l~~~i~~~l~~~~ 415 (460)
+..+++ ++ ..+|..|+.|||++|||+|.++-..=. ..-+..+ ...|+... +. -+.++..+...++.+|
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LIA--~d~eeYv~~Av~La~D-- 588 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLIA--NTVDEYVERAVRLAEN-- 588 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGEE--SSHHHHHHHHHHHHHC--
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCcceec--CCHHHHHHHHHHHhCC--
Confidence 477887 54 337889999999999999998743211 1112233 34676542 32 3577777777777777
Q ss_pred HHHHHHH
Q 012587 416 EEFMESA 422 (460)
Q Consensus 416 ~~~~~~a 422 (460)
+..+++.
T Consensus 589 ~~~l~~L 595 (631)
T 3q3e_A 589 HQERLEL 595 (631)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 53
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.40 E-value=0.003 Score=54.21 Aligned_cols=83 Identities=10% Similarity=0.006 Sum_probs=59.5
Q ss_pred Ccee-eeecCh---Hhhhccccccccccc----CChhHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 328 RGCI-AGWVPQ---EEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 328 n~~~-~~~vp~---~~il~~~~~~~~I~H----GG~gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
|+.+ .+++++ ..++..+++ +|.- |...++.||+++|+|+|+.... .....+ ..+.|..+ ..-+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~-~~~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILV-KAGD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEE-CTTC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEe-cCCC
Confidence 8999 899984 577888887 5532 2346899999999999887532 233333 23567666 4458
Q ss_pred hHHHHHHHHHHHh-HhHHHHHHH
Q 012587 400 RNIVEKAVNDLMV-ERKEEFMES 421 (460)
Q Consensus 400 ~~~l~~~i~~~l~-~~~~~~~~~ 421 (460)
.+.+.++|.++++ | +..+++
T Consensus 167 ~~~l~~~i~~l~~~~--~~~~~~ 187 (200)
T 2bfw_A 167 PGELANAILKALELS--RSDLSK 187 (200)
T ss_dssp HHHHHHHHHHHHHCC--HHHHHH
T ss_pred HHHHHHHHHHHHhcC--HHHHHH
Confidence 8999999999998 7 654443
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.39 E-value=0.0078 Score=62.75 Aligned_cols=119 Identities=18% Similarity=0.256 Sum_probs=82.5
Q ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHH------hcCCceeeeecChH
Q 012587 265 PKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEA------TKERGCIAGWVPQE 338 (460)
Q Consensus 265 ~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~n~~~~~~vp~~ 338 (460)
++..+||++|.+..+.++..+....+.|++.+--.+|....+. .....+.+. .++++.+.+..|..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~--------~~~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA--------VGEPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG--------GGHHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH--------HHHHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 3567999999999999999999999999999888888875321 111222211 13567777888854
Q ss_pred h---hhcccccccccc---cCChhHHHHHHHhCCceeccccccc-chhhHHHHHhhhceeeee
Q 012587 339 E---VLAHSAVGGFLT---HCGWNSTLESIVAGMPMICWPSFAD-QQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 339 ~---il~~~~~~~~I~---HGG~gs~~eal~~GvP~l~~P~~~D-Q~~na~~~~e~~G~g~~~ 394 (460)
+ .+..+++ ++- .+|.+|+.|||+.|||+|.++-..= -..-+..+ ..+|+...+
T Consensus 592 ~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~i 651 (723)
T 4gyw_A 592 EHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELI 651 (723)
T ss_dssp HHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGB
T ss_pred HHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccc
Confidence 4 4456665 654 8999999999999999999984221 11222344 356766555
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.27 E-value=0.06 Score=52.05 Aligned_cols=84 Identities=12% Similarity=0.086 Sum_probs=56.8
Q ss_pred CCceeeeecChH---hhhcccccccccc--c-CCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcc
Q 012587 327 ERGCIAGWVPQE---EVLAHSAVGGFLT--H-CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 399 (460)
Q Consensus 327 ~n~~~~~~vp~~---~il~~~~~~~~I~--H-GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~ 399 (460)
+++.+.+++|+. .++..+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+ +.-..|..+ ..-+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv-~~~d 365 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSL-EQLN 365 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEE-SSCS
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEe-CCCC
Confidence 578888999864 56778887 553 2 133 478999999999997 3222 12234 342457766 4568
Q ss_pred hHHHHHHHHHHHhHhHHHHHHH
Q 012587 400 RNIVEKAVNDLMVERKEEFMES 421 (460)
Q Consensus 400 ~~~l~~~i~~~l~~~~~~~~~~ 421 (460)
+++|+++|.++++| +..+++
T Consensus 366 ~~~la~ai~~ll~~--~~~~~~ 385 (413)
T 2x0d_A 366 PENIAETLVELCMS--FNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHHH--TC----
T ss_pred HHHHHHHHHHHHcC--HHHHHH
Confidence 99999999999998 666655
No 56
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=95.04 E-value=0.027 Score=49.87 Aligned_cols=116 Identities=12% Similarity=0.115 Sum_probs=64.1
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
.+++||||+..=-+. +.--+.+|+++|++ +|+|+++.+.....-. |..... ...+.+..+.+++ ..
T Consensus 8 ~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~----g~siTl---~~pl~~~~~~~~~-----~~ 73 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA----SNSLTL---NAPLHIKNLENGM-----IS 73 (261)
T ss_dssp ---CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC----TTCCCC---SSCEEEEECTTSC-----EE
T ss_pred cCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc----ccceec---CCCeEEEEecCCe-----EE
Confidence 467799988876655 44557888999987 8999999985543222 222221 2225555543221 12
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecc
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
......-|-.+.- ..++ +.+||+||+..- ++ .+..-|..+|||.|.++..
T Consensus 74 v~GTPaDCV~lal------~~l~---~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 74 VEGTPTDCVHLAI------TGVL---PEMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp ESSCHHHHHHHHT------TTTS---SSCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred ECCCHHHHHHHHH------HHhc---CCCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 2233333333321 1222 238999997532 22 2333345789999998764
No 57
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=94.76 E-value=0.18 Score=44.48 Aligned_cols=115 Identities=11% Similarity=0.176 Sum_probs=66.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|||||+..=-+. +.--+.+|+++|++.| +|+++.+.....-. |..... ...+.+..+..+.. + ....
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~----g~sit~---~~pl~~~~~~~~~~---~-~v~G 67 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGV----GHSLTF---TEPLKMRKIDTDFY---T-VIDG 67 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTS----CCSCCC---SSCEEEEEEETTEE---E-ETTC
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCC----ccceec---CCCeEEEEecCCCe---E-EECC
Confidence 579988876554 4455789999999998 99999985542222 222221 22255555443210 1 1222
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecc
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
...-|-.+. +..++.. .+||+||+... ++ .+..-|..+|||.|.++..
T Consensus 68 TPaDCV~la------l~~l~~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 68 TPADCVHLG------YRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp CHHHHHHHH------HHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHH------HHHhcCC--CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 233333222 2233332 38999998532 22 4566677999999998764
No 58
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.32 E-value=0.096 Score=52.49 Aligned_cols=130 Identities=12% Similarity=0.058 Sum_probs=73.6
Q ss_pred cEEEEEecCccc-CCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHH---HHHhcCCceeeeecCh---Hhh
Q 012587 268 SVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEEL---LEATKERGCIAGWVPQ---EEV 340 (460)
Q Consensus 268 ~~V~vs~GS~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~vp~---~~i 340 (460)
.++++..|.... ...+.+...+..+.+.+.++++...+ .. .....+ ....++++.+....+. ..+
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G-------~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 398 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTG-------KK-KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLI 398 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCB-------CH-HHHHHHHHHHHHSTTTEEEECSCCHHHHHHH
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEecc-------Cc-hHHHHHHHHHhhcCCceEEEEeccHHHHHHH
Confidence 334466777653 23444444444444456676655431 11 111111 1234678888877775 356
Q ss_pred hccccccccccc---CCh-hHHHHHHHhCCceecccccccchhhHHHHHhhhceeeeec---------CCcchHHHHHHH
Q 012587 341 LAHSAVGGFLTH---CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK---------DLCDRNIVEKAV 407 (460)
Q Consensus 341 l~~~~~~~~I~H---GG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~---------~~~~~~~l~~~i 407 (460)
++.+++ ||.= =|. .+++||+++|+|+|+....+ ....+ +.-..|.... ...+.+.|.++|
T Consensus 399 ~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai 471 (536)
T 3vue_A 399 MAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATL 471 (536)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHH
T ss_pred HHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCCC----chhee-eCCCCccccccCCCceeEECCCCHHHHHHHH
Confidence 788887 5532 233 48999999999999876432 22233 2212333221 345678899999
Q ss_pred HHHHh
Q 012587 408 NDLMV 412 (460)
Q Consensus 408 ~~~l~ 412 (460)
+++|+
T Consensus 472 ~ral~ 476 (536)
T 3vue_A 472 KRAIK 476 (536)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98886
No 59
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=93.61 E-value=0.41 Score=42.45 Aligned_cols=115 Identities=11% Similarity=0.173 Sum_probs=64.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (460)
|.|||+..=-+. +.--+.+|+++|.+.| +|+++.+.....-. |..... ...+++..+.... ......
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~----g~siT~---~~pl~~~~~~~~~----~~~v~G 67 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGV----GHSLTF---TEPLKMRKIDTDF----YTVIDG 67 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTS----CCSCCC---SSCEEEEEEETTE----EEETTC
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCccc----ccCcCC---CCCceeEEeeccc----eeecCC
Confidence 568888765543 3334778999999998 59988875542221 222222 2224454443210 011222
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC----------Ccc---hHHHHHHHhCCceEEEecc
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDG----------YMS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~----------~~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
...-|-.+. +..++.+ .+||+||+.. +++ .|+.-|..+|||.|.++..
T Consensus 68 TPaDCV~la------l~~~l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 68 TPADCVHLG------YRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp CHHHHHHHH------HHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ChHHHHhhh------hhhhcCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 333333332 2334444 3899999842 222 5667788999999998753
No 60
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=90.20 E-value=1.1 Score=39.45 Aligned_cols=115 Identities=10% Similarity=0.085 Sum_probs=63.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||||+..=-+. |.--+.+|+++|++.| +|+++.+.....-. |..... ...+++..++.+-....+ .....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~----g~siTl---~~pl~~~~~~~~~~~~~~-~v~GT 70 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSAT----GHSITI---HVPLWMKKVFISERVVAY-STTGT 70 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC----TTCCCC---SSCCCEEECCCSSSEEEE-EESSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC----cccccC---CCCeEEEEeccCCCCceE-EECCc
Confidence 57777665544 3344789999999988 89999985542222 222222 223555555332000001 11222
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEec
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~ 140 (460)
..-|-.+. +..++. .+||+||+..- ++ .+..-|..+|||.|.++.
T Consensus 71 PaDCV~la------l~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 71 PADCVKLA------YNVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHHHHHH------HHTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHH------HHhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 22232222 122332 38999997532 22 456667789999999876
No 61
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=89.78 E-value=2.6 Score=37.00 Aligned_cols=115 Identities=13% Similarity=0.095 Sum_probs=65.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCC-CC-CCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLP-RD-HPRTPD 84 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~ 84 (460)
||||+..=-+. +.--+.+|+++|++.| +|+++.+.....- .|..... ...+++..++.+.+ .+ ......
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg----~g~siTl---~~pl~~~~~~~~~~~~~~~~~~v~ 71 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSA----AGHAITI---AHPVRAYPHPSPLHAPHFPAYRVR 71 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCC----CCSSCCC---SSCBEEEECCCCTTSCCCCEEEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcC----CcccccC---CCCeEEEEeccCcCCCCCceEEEc
Confidence 57777665544 3344789999999988 8999998554221 1222222 22366666643210 00 001122
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecc
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
....-|-.+.- . +. .+||+||+..- ++ .+..-|..+|||.|.++..
T Consensus 72 GTPaDCV~lal------~--l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 130 (244)
T 2e6c_A 72 GTPADCVALGL------H--LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVP 130 (244)
T ss_dssp SCHHHHHHHHH------H--HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CcHHHHHHHHH------c--CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEecc
Confidence 22333333321 1 32 38999997532 22 4566677899999998753
No 62
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=88.99 E-value=3.4 Score=37.92 Aligned_cols=37 Identities=14% Similarity=0.189 Sum_probs=28.2
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+|+||||+|+-.|..+ +..-++|.++||+|..+.+..
T Consensus 1 ~~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CCTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 3689999999887543 345678888899998777643
No 63
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.80 E-value=0.21 Score=50.00 Aligned_cols=37 Identities=16% Similarity=0.381 Sum_probs=28.3
Q ss_pred CCCcEEEEEcC--------CCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPL--------PAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~--------~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+.|||+++++ |+.|++ .-+|+++|+++||+|+++++
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P 51 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISP 51 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEE
T ss_pred CCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEec
Confidence 34689999974 333344 55789999999999999985
No 64
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=88.66 E-value=3 Score=37.40 Aligned_cols=114 Identities=10% Similarity=0.033 Sum_probs=63.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
||||+..=-+. +.--+.+|+++|++.| +|+++.+.....-. |..... ...+++..++.+ ....+ .....
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~----g~siTl---~~pl~~~~~~~~-~~~~~-~v~GT 69 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSAT----GLGITL---HKPLRMYEVDLC-GFRAI-ATSGT 69 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTS----CSSCCC---SSCBCEEEEECS-SSEEE-EESSC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCC----cccccC---CCCeEEEEeccC-CCceE-EECCc
Confidence 57777665544 3344789999999998 99999985542222 222222 223555555321 00011 12222
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC-----------Ccc---hHHHHHHHhCCceEEEecc
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDG-----------YMS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~-----------~~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
..-|-.+. +..+ .- +||+||+.. +++ .+..-|..+|||.|.++..
T Consensus 70 PaDCV~la------l~~l--~~--~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 70 PSDTVYLA------TFGL--GR--KYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HHHHHHHH------HHHH--TS--CCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHH------HhcC--CC--CCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 33333322 2333 32 999999742 222 4556677899999999764
No 65
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=88.14 E-value=3.5 Score=36.25 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=30.9
Q ss_pred CCCcEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 4 QDHVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 4 ~~~~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
++|+|.+|++. ..-|-..-++.|++.|+++|.+|.++=
T Consensus 18 ~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 18 YFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp -CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 45667666655 478899999999999999999999984
No 66
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=87.93 E-value=0.27 Score=47.45 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=31.8
Q ss_pred CCCcEEEEEcCCCC-----CCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 4 QDHVHVAILPLPAV-----GHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 4 ~~~~~il~~~~~~~-----Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
.++|||++++.... |=......++++|+++||+|++++..
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 46789998886421 43456889999999999999999974
No 67
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=87.55 E-value=2.3 Score=36.65 Aligned_cols=105 Identities=7% Similarity=0.092 Sum_probs=59.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCC--eEEEEeCcc-chh--HHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGI--KITFLNTEH-YYD--RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH--~Vt~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
|+||+|+..|+.. -+.++.++|.+.+| +|..+.+.. ... ..++.. ++.+..++.. .
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~-----------gIp~~~~~~~----~- 61 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH-----------NVECKVIQRK----E- 61 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH-----------TCCEEECCGG----G-
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc-----------CCCEEEeCcc----c-
Confidence 5799999888743 36677788888888 765554432 222 122222 3555444311 0
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
..+ . ....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 62 --~~~-r-------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 62 --FPS-K-------KEFEERMALELKKK--GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --SSS-H-------HHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --ccc-h-------hhhhHHHHHHHHhc--CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 001 0 11224456677777 999999876633 3444445555567776665
No 68
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=86.92 E-value=3.5 Score=35.81 Aligned_cols=107 Identities=10% Similarity=0.066 Sum_probs=62.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCcc-chh--HHhhccccccccccCCCCceEEecCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEH-YYD--RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (460)
.+||||+|+..|+. + -+.++.++|.+. +++|..+.+.. ... ..++.. ++.+..++..
T Consensus 20 ~~~~rI~~l~SG~g-~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~-----------gIp~~~~~~~---- 81 (229)
T 3auf_A 20 GHMIRIGVLISGSG-T--NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA-----------GVDALHMDPA---- 81 (229)
T ss_dssp TTCEEEEEEESSCC-H--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT-----------TCEEEECCGG----
T ss_pred CCCcEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc-----------CCCEEEECcc----
Confidence 56789999988874 3 356777788776 68876665432 222 222222 3666544320
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
. ..+ . ....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 82 ~---~~~-r-------~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 82 A---YPS-R-------TAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp G---SSS-H-------HHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred c---ccc-h-------hhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 0 000 0 11224556777777 999999876633 4455556666677777665
No 69
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=86.90 E-value=2.9 Score=39.73 Aligned_cols=36 Identities=19% Similarity=0.065 Sum_probs=28.3
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
+|+++||+++..+.. .+.+++++++.|++|.++..+
T Consensus 4 m~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 4 MYDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp --CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred ccCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 356789999988764 367999999999999999763
No 70
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=85.85 E-value=1.2 Score=38.22 Aligned_cols=45 Identities=16% Similarity=0.078 Sum_probs=37.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
++||++...|+.|-++ ...|.+.|+++|++|.++.++.-...+..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 4699999999988887 89999999999999999999554444444
No 71
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=85.39 E-value=4.7 Score=37.20 Aligned_cols=100 Identities=8% Similarity=-0.017 Sum_probs=55.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccc-------hhHHhhccccccccccCCCCceEEecCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY-------YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (460)
|||+|+ |--+-...+.++|.++||+|..+.+... ....++.. ++.+...+. +...
T Consensus 23 mrIvf~-----G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~-----------gIpv~~~~~-~~~~- 84 (329)
T 2bw0_A 23 MKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD-----------GVPVFKYSR-WRAK- 84 (329)
T ss_dssp CEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH-----------TCCEEECSC-CEET-
T ss_pred CEEEEE-----cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc-----------CCCEEecCc-cccc-
Confidence 799999 2223344567899999999976665211 11222222 244443321 1000
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
....+.+.+.++++ +||++|.-.+.. ....+-+.....++-++++
T Consensus 85 ---------------~~~~~~~~~~l~~~--~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 85 ---------------GQALPDVVAKYQAL--GAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp ---------------TEECHHHHHHHHTT--CCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred ---------------ccccHHHHHHHHhc--CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 01224455667777 999999876633 3344444455567777765
No 72
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=85.05 E-value=1.4 Score=34.95 Aligned_cols=47 Identities=11% Similarity=0.078 Sum_probs=39.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
..||++.+.++.+|-....-++..|..+|++|.+++..-..+.+.+.
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~ 49 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKA 49 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 45999999999999999999999999999999988764445555443
No 73
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=84.94 E-value=2.7 Score=37.06 Aligned_cols=112 Identities=12% Similarity=0.153 Sum_probs=61.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCC-C
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPD-K 85 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 85 (460)
||||+..=-+. |.--+.+|+++|++.| +|+++.+.....-. |..... ...+++..+.. ..+ ... .
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~----g~aiTl---~~Pl~~~~~~~----~~~-~v~~G 67 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGA----SNSLTL---ESSLRTFTFDN----GDI-AVQMG 67 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTC----TTCCCC---SSCCEEEECTT----SCE-EEETC
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCc----cCCcCC---CCCeEEEEeCC----CCe-EECCC
Confidence 58887766554 4444788999999886 99999985542222 222222 22245544421 111 112 2
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC----------cc---hHHHHHHHhCCceEEEecc
Q 012587 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 86 ~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
...-|-.+. +..++ ..+||+||+... ++ .+..-|..+|||.|.++..
T Consensus 68 TPaDCV~la------l~~ll---~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 127 (254)
T 2v4n_A 68 TPTDCVYLG------VNALM---RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLN 127 (254)
T ss_dssp CHHHHHHHH------HHTTS---SSCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEES
T ss_pred CHHHHHHHH------Hhhcc---CCCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEecC
Confidence 232333222 12233 238999997532 22 3444455799999998763
No 74
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=84.08 E-value=6.1 Score=33.84 Aligned_cols=106 Identities=8% Similarity=0.058 Sum_probs=61.5
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCcc-chh--HHhhccccccccccCCCCceEEecCCCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEH-YYD--RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (460)
+|+||+++..|+..- +.++.++|.+. +|+|..+.+.. ... ..++.. ++.+..++. ..
T Consensus 2 ~m~ki~vl~sG~g~~---~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~-----------gIp~~~~~~----~~ 63 (212)
T 3av3_A 2 HMKRLAVFASGSGTN---FQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE-----------NVPAFVFSP----KD 63 (212)
T ss_dssp CCEEEEEECCSSCHH---HHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT-----------TCCEEECCG----GG
T ss_pred CCcEEEEEEECCcHH---HHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc-----------CCCEEEeCc----cc
Confidence 367999998887432 55666778776 78997666532 222 112222 355554431 00
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
..+ . ....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 64 ---~~~-~-------~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 64 ---YPS-K-------AAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ---SSS-H-------HHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ---ccc-h-------hhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 001 0 01124456677777 999999876643 4455556666677777665
No 75
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=83.80 E-value=22 Score=31.22 Aligned_cols=120 Identities=14% Similarity=0.131 Sum_probs=68.5
Q ss_pred CCcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeC------c--cchhHHhhccccccccccCCC-CceEEecCCC
Q 012587 5 DHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNT------E--HYYDRVIRHSSDAFSRYMQIP-GFQFKTLTDG 74 (460)
Q Consensus 5 ~~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~------~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 74 (460)
+|..|+|... ..-|-..-++.|++.|+++|++|.++=+ + .....+.+..+ .+ ..+...+..
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g--------~~~~~~~~~~~~- 95 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAG--------VTQLAGLARYPQ- 95 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHC--------CCEEEEEEECSS-
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcC--------CCCCCCCeeECC-
Confidence 3334444444 3788999999999999999999999842 1 11222222222 00 011111111
Q ss_pred CCCCCCCCCCChHHHHHHHHh---hCcHHHHHHHHcCCCCccEEEEcCCc----------chHHHHHHHhCCceEEEecc
Q 012587 75 LPRDHPRTPDKFPELVDSLNC---ATPPLLKEMVSDSKSPVNCIITDGYM----------SRAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~pD~vv~D~~~----------~~~~~~A~~lgiP~v~~~~~ 141 (460)
...+. .-..+.. ...+.+.+.++++..+.|+||.|.-. .....+|+.++.|+|.+...
T Consensus 96 --------p~sP~-~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~ 166 (251)
T 3fgn_A 96 --------PMAPA-AAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTA 166 (251)
T ss_dssp --------SSCHH-HHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECS
T ss_pred --------CCChH-HHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcC
Confidence 00110 1001110 12355677777665689999988731 24567899999999998876
Q ss_pred h
Q 012587 142 S 142 (460)
Q Consensus 142 ~ 142 (460)
.
T Consensus 167 ~ 167 (251)
T 3fgn_A 167 D 167 (251)
T ss_dssp S
T ss_pred C
Confidence 4
No 76
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=83.64 E-value=3.9 Score=37.89 Aligned_cols=41 Identities=20% Similarity=0.199 Sum_probs=34.9
Q ss_pred CCCcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 4 QDHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 4 ~~~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+++++|+|++. |+-|-..-..++|..|+++|++|.++....
T Consensus 13 ~~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 13 QRSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 34567877765 799999999999999999999999999854
No 77
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=83.16 E-value=11 Score=34.55 Aligned_cols=35 Identities=11% Similarity=0.063 Sum_probs=25.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|++|||+|+-.|. ..+..-++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 5568999997763 3455668888899999877663
No 78
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=82.89 E-value=0.78 Score=43.36 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=32.1
Q ss_pred CcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||+|++++. |+-|-..-...+|..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 578887776 6888888899999999999999999987
No 79
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=82.85 E-value=2.2 Score=33.75 Aligned_cols=49 Identities=12% Similarity=0.141 Sum_probs=32.0
Q ss_pred CCCCCCcEEEEEcC-C-CCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHH
Q 012587 1 MEKQDHVHVAILPL-P-AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRV 49 (460)
Q Consensus 1 ~~~~~~~~il~~~~-~-~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~ 49 (460)
|.+...||++++-. | ..--+.-.+-++..|+++||+|++.+++...+-+
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLl 51 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLV 51 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhe
Confidence 44445578766644 4 4444455788999999999999999996644443
No 80
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=82.48 E-value=2.2 Score=35.94 Aligned_cols=45 Identities=11% Similarity=0.109 Sum_probs=36.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
|+||++...|+.|-. =...+.+.|+++|++|.++.++.-.+.+..
T Consensus 1 mk~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 1 MQKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CCEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 359999999998854 578999999999999999999555445544
No 81
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=82.44 E-value=5.5 Score=33.63 Aligned_cols=109 Identities=9% Similarity=0.042 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCC-------------CCCC-----CC
Q 012587 18 GHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTD-------------GLPR-----DH 79 (460)
Q Consensus 18 Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~-----~~ 79 (460)
|.+.-.+.+++.+ +.|.+|.+..+ .++..+.+... +.+..++- .... +.
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRG-gta~~lr~~~~-----------iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~ 102 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRG-ATSDYIKKSVS-----------IPSISIKVTRFDTMRAVYNAKRFGNELALIAY 102 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEH-HHHHHHHTTCS-----------SCEEEECCCHHHHHHHHHHHGGGCSEEEEEEE
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECC-hHHHHHHHhCC-----------CCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeC
Confidence 5667777888888 88888776665 77777777543 22322220 0000 00
Q ss_pred CCCCCChHHHHHHHHhh-------CcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEEEecch
Q 012587 80 PRTPDKFPELVDSLNCA-------TPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~~ 142 (460)
.........+...+... ..+.+++.++++ ..+.|+||.|.. +..+|+++|+|.+.+.+..
T Consensus 103 ~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 103 KHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp SSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred cchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 01222333333322211 134445555555 459999999854 6899999999999988753
No 82
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=82.37 E-value=8.4 Score=33.73 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=31.3
Q ss_pred CcEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|+||+.+.. |+-|-..-...||..|+++|++|.++-...
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 456655544 688889999999999999999999998644
No 83
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=82.21 E-value=6.4 Score=33.01 Aligned_cols=37 Identities=22% Similarity=0.392 Sum_probs=30.0
Q ss_pred EEEEEc--CCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 8 HVAILP--LPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 8 ~il~~~--~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
||+.+. -|+-|--.-...||..|+++|++|.++-...
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 444443 3688999999999999999999999998643
No 84
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=82.00 E-value=8.5 Score=37.68 Aligned_cols=112 Identities=13% Similarity=0.068 Sum_probs=68.7
Q ss_pred CceeeeecCh---Hhhhcccccccccc--cCChh-HHHHHHHhC---CceecccccccchhhHHHHHhhhceeeeecCCc
Q 012587 328 RGCIAGWVPQ---EEVLAHSAVGGFLT--HCGWN-STLESIVAG---MPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 398 (460)
Q Consensus 328 n~~~~~~vp~---~~il~~~~~~~~I~--HGG~g-s~~eal~~G---vP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~ 398 (460)
.|.+...+|+ ..++..+++ ++++ .=|+| +..||+++| .|+|+--+.+ .+..+. .-|+.+ ...
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allV-nP~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSV-NPF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEE-CTT
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEE-CCC
Confidence 4666788886 456667887 3333 45887 568999996 5665543322 222221 136666 557
Q ss_pred chHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 399 DRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 399 ~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
+.+.++++|.++|++...+-+++.+++.+.+++ -....-++++++.|...
T Consensus 424 D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp BHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 899999999999984113344455555555443 23345567788777654
No 85
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=81.29 E-value=1.9 Score=36.49 Aligned_cols=45 Identities=9% Similarity=0.042 Sum_probs=37.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhc
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~ 52 (460)
|||++...|+.|-+. ...+.+.|+++ |++|.++.++.-.+.+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 589999999987766 89999999999 9999999996655555444
No 86
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=79.06 E-value=2.3 Score=39.22 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=32.4
Q ss_pred cEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 7 VHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
++|+|++. |+-|-..-..+||..|+++|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46655554 799999999999999999999999999854
No 87
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=77.90 E-value=21 Score=30.04 Aligned_cols=97 Identities=7% Similarity=0.086 Sum_probs=59.6
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccc-----hhHHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY-----YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
.-.|.+++..+-|-..-.+.+|.....+|++|.|+..-.. ...+.+. . ++++.....++.-.
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~----------L-~v~~~~~g~gf~~~-- 94 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP----------H-GVEFQVMATGFTWE-- 94 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG----------G-TCEEEECCTTCCCC--
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh----------C-CcEEEEcccccccC--
Confidence 3478899999999999999999999999999999964332 1122222 2 37777776644321
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcC-CCCccEEEEcCCc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYM 121 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~pD~vv~D~~~ 121 (460)
...... -... ....+....+.+ +.++|+||.|-+.
T Consensus 95 --~~~~~~-~~~~---a~~~l~~a~~~l~~~~yDlvILDEi~ 130 (196)
T 1g5t_A 95 --TQNREA-DTAA---CMAVWQHGKRMLADPLLDMVVLDELT 130 (196)
T ss_dssp --GGGHHH-HHHH---HHHHHHHHHHHTTCTTCSEEEEETHH
T ss_pred --CCCcHH-HHHH---HHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 111111 1111 123333333333 3599999999764
No 88
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=77.51 E-value=5.3 Score=36.67 Aligned_cols=32 Identities=13% Similarity=0.113 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC-C-CeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA-G-IKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~r-G-H~Vt~~~~ 42 (460)
++|||+++..+.. +.+++.|++. | ++|..+..
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~ 36 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADC 36 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEES
T ss_pred ccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeC
Confidence 4579999866664 4789999986 7 88888765
No 89
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=77.45 E-value=10 Score=36.65 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=28.1
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|+.+.|.||+++.. |. -.+.+++++++.|++|..+.+..
T Consensus 1 m~~~~~k~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~~ 39 (461)
T 2dzd_A 1 METRRIRKVLVANR---GE--IAIRVFRACTELGIRTVAIYSKE 39 (461)
T ss_dssp --CCCCSEEEECSC---HH--HHHHHHHHHHHHTCEEEEEECGG
T ss_pred CCCCcCcEEEEECC---cH--HHHHHHHHHHHcCCEEEEEECCc
Confidence 77766778988743 32 35789999999999999887643
No 90
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=77.43 E-value=4.9 Score=37.44 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=39.1
Q ss_pred CCCcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccc
Q 012587 4 QDHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSS 54 (460)
Q Consensus 4 ~~~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~ 54 (460)
.+|.+|+|++. |+-|-..-..+||..|+++|++|.++..+. ...+....+
T Consensus 23 ~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~l~ 73 (349)
T 3ug7_A 23 KDGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP-AHSLRDIFE 73 (349)
T ss_dssp SCSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT-TCHHHHHHC
T ss_pred cCCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC-CCCHHHHhC
Confidence 35667776665 799999999999999999999999999855 445544443
No 91
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=77.09 E-value=16 Score=37.24 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=30.1
Q ss_pred eecCh---------Hhhhcccccccccc---cCCh-hHHHHHHHhCCceeccccc
Q 012587 333 GWVPQ---------EEVLAHSAVGGFLT---HCGW-NSTLESIVAGMPMICWPSF 374 (460)
Q Consensus 333 ~~vp~---------~~il~~~~~~~~I~---HGG~-gs~~eal~~GvP~l~~P~~ 374 (460)
.|++. .++++.+++ ||. +=|+ .+.+||+++|+|+|+.-..
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 77765 467889998 553 2344 5899999999999987654
No 92
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=77.00 E-value=2.8 Score=34.19 Aligned_cols=48 Identities=17% Similarity=0.215 Sum_probs=40.0
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
+..||++.+.++.+|-....-++..|..+|++|.+++..-..+.+.+.
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~a 64 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMA 64 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 457999999999999999999999999999999998764445554443
No 93
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=76.67 E-value=6.8 Score=37.49 Aligned_cols=98 Identities=15% Similarity=0.125 Sum_probs=53.1
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCC-ceEEecCCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPG-FQFKTLTDGLPRDH 79 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (460)
|++ +..||+|++.+.... .+.++.++.|++|+++...... .... ... -.+..++.
T Consensus 1 M~~-~~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~~~~--~~~~----------~~~~d~~~~~~~------ 56 (425)
T 3vot_A 1 MTK-RNKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNSAED--FPGN----------LPAVERCVPLPL------ 56 (425)
T ss_dssp -CC-CCCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEETTSC--CCCS----------CTTEEEEEEECT------
T ss_pred CCC-CCcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECCCcc--cccC----------HhhccEEEecCC------
Confidence 555 335888887654322 3568888899999998753321 1000 000 12333331
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcC--CcchHHHHHHHhCCce
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDG--YMSRAIDAAREVGVSI 135 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~--~~~~~~~~A~~lgiP~ 135 (460)
..+...+. +.+.++.++. ++|.|++-. ....+..+|+.+|+|.
T Consensus 57 ---~~d~~~~~--------~~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 57 ---FEDEEAAM--------DVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ---TTCHHHHH--------HHHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ---CCCHHHHH--------HHHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 11222121 3345556665 899998542 2224667789999994
No 94
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=76.54 E-value=1.3 Score=34.99 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=25.5
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|...+|+||+++-. |.+ -..+++.|.++||+|+++..
T Consensus 1 m~~~~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 1 MTENGRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp -----CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEES
T ss_pred CCCCCCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEEC
Confidence 44455678988865 432 45789999999999999875
No 95
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=76.43 E-value=7.1 Score=34.35 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=26.5
Q ss_pred CCCccEEE-EcCCcc-hHHHHHHHhCCceEEEecchh
Q 012587 109 KSPVNCII-TDGYMS-RAIDAAREVGVSIIYFRTISA 143 (460)
Q Consensus 109 ~~~pD~vv-~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 143 (460)
...||+|| .|...- .+..=|.++|||+|.++.+-.
T Consensus 156 ~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn~ 192 (256)
T 2vqe_B 156 KRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDS 192 (256)
T ss_dssp SSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTTS
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence 35899886 665543 577889999999999887643
No 96
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=75.97 E-value=3.3 Score=34.30 Aligned_cols=39 Identities=13% Similarity=0.028 Sum_probs=33.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYY 46 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (460)
+||++...|+.|=+. ...+.+.|+++|++|.++.++.-.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHH
Confidence 599999999977665 899999999999999999985543
No 97
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=75.21 E-value=5.5 Score=39.01 Aligned_cols=90 Identities=14% Similarity=0.157 Sum_probs=54.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh----HHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD----RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
.||+|+..+. + .+.+++.|.+-|-+|..+++....+ .+.+..+ .+ .....
T Consensus 333 Krv~i~~~~~--~---~~~l~~~L~ElGmevv~~gt~~~~~~d~~~~~~~l~------------------~~---~~i~~ 386 (483)
T 3pdi_A 333 KRVLLYTGGV--K---SWSVVSALQDLGMKVVATGTKKSTEEDKARIRELMG------------------DD---VKMLD 386 (483)
T ss_dssp CEEEEECSSS--C---HHHHHHHHHHHTCEEEEECBSSSCHHHHHHHHHHSC------------------SS---CCBCC
T ss_pred CEEEEECCCc--h---HHHHHHHHHHCCCEEEEEecCCCCHHHHHHHHHhcC------------------CC---CEEEe
Confidence 4888866543 3 3467778888999999876643221 2222111 00 00000
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEe
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFR 139 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~ 139 (460)
.. -...+.+++++. +||++|.... ...+|+++|||++.+.
T Consensus 387 d~------------d~~el~~~i~~~--~pDL~ig~~~---~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 387 EG------------NARVLLKTVDEY--QADILIAGGR---NMYTALKGRVPFLDIN 426 (483)
T ss_dssp SC------------SHHHHHHHHHHT--TCSEEECCGG---GHHHHHHTTCCBCCCC
T ss_pred CC------------CHHHHHHHHHhc--CCCEEEECCc---hhHHHHHcCCCEEEec
Confidence 00 124556777776 9999999753 6678999999998654
No 98
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=73.75 E-value=29 Score=30.42 Aligned_cols=42 Identities=17% Similarity=0.105 Sum_probs=32.4
Q ss_pred CCcEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 012587 5 DHVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEHYY 46 (460)
Q Consensus 5 ~~~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (460)
+|+|++.+.. |+-|--.-...||..|+++|++|.++-.....
T Consensus 16 ~~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 16 KIKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp TCSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred cCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3455554443 58889999999999999999999999764443
No 99
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=73.05 E-value=6.5 Score=29.41 Aligned_cols=39 Identities=3% Similarity=0.038 Sum_probs=31.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+|+||+++|..+.|-=.-.-.+=+.+.++|.++.+...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 456799999998877776666888899999998876653
No 100
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=72.89 E-value=6.3 Score=30.87 Aligned_cols=40 Identities=8% Similarity=0.000 Sum_probs=30.9
Q ss_pred CcEEEEEcCC---CCCCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 012587 6 HVHVAILPLP---AVGHVNSMLNLAELLGHAGIKITFLNTEHY 45 (460)
Q Consensus 6 ~~~il~~~~~---~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (460)
++|++|+... +....+..+.+|......||+|+++....-
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dG 57 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXG 57 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCc
Confidence 4577666554 466778888999999999999999987443
No 101
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=72.82 E-value=5.2 Score=36.63 Aligned_cols=44 Identities=23% Similarity=0.258 Sum_probs=39.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVI 50 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~ 50 (460)
|||+++...+.||+.-+.++.++|+++ +.+|++++.+.+.+-+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~ 46 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPS 46 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHh
Confidence 599999999999999999999999998 99999999977655543
No 102
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=72.74 E-value=7 Score=33.85 Aligned_cols=36 Identities=6% Similarity=-0.023 Sum_probs=21.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
|++|+++...-.--..-+-..-..+.++|++|++++
T Consensus 1 m~~vL~v~aHPDDe~l~~ggtia~~~~~G~~v~vv~ 36 (227)
T 1uan_A 1 MLDLLVVAPHPDDGELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp CEEEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEEeCCCcHHHhHHHHHHHHHhCCCcEEEEE
Confidence 567755544332334444445556668999988776
No 103
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=72.51 E-value=37 Score=27.55 Aligned_cols=142 Identities=11% Similarity=0.153 Sum_probs=79.0
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccc
Q 012587 266 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 345 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~ 345 (460)
-+|.|-|-+||.+ +....+.....++.+|.++-+.+- ....+|+.+.+... + .....
T Consensus 10 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~--------SaHR~p~~l~~~~~----------~---a~~~g 66 (170)
T 1xmp_A 10 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVV--------SAHRTPDYMFEYAE----------T---ARERG 66 (170)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHHHHHH----------H---TTTTT
T ss_pred CCCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------eccCCHHHHHHHHH----------H---HHhCC
Confidence 3577888888875 677788899999999988755542 12245554432110 0 00011
Q ss_pred cccccccCCh----hHHHHHHHhCCceecccccccchhhH--HHHH-hh--hceeee---ec--CCcchHHHHHHHHHHH
Q 012587 346 VGGFLTHCGW----NSTLESIVAGMPMICWPSFADQQINS--RFVG-EV--WKLGLD---IK--DLCDRNIVEKAVNDLM 411 (460)
Q Consensus 346 ~~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~~na--~~~~-e~--~G~g~~---~~--~~~~~~~l~~~i~~~l 411 (460)
++++|.=+|. .++..++ .-+|++.+|.... ..++ ..+. -+ -|+.+. ++ ...++.-+...|.. +
T Consensus 67 ~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~-~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla-~ 143 (170)
T 1xmp_A 67 LKVIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSK-ALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILG-S 143 (170)
T ss_dssp CCEEEEEEESSCCHHHHHHTT-CCSCEEEEEECCT-TTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHHH-T
T ss_pred CcEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCC-CCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHHc-c
Confidence 2236665553 3444333 3689999998542 1122 1221 12 344432 11 12445555544443 3
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhhc
Q 012587 412 VERKEEFMESADRMANLAKKSVNK 435 (460)
Q Consensus 412 ~~~~~~~~~~a~~l~~~~~~~~~~ 435 (460)
.| +.++++.+.+++++++.+.+
T Consensus 144 ~d--~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 144 FH--DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHC
T ss_pred CC--HHHHHHHHHHHHHHHHHHHh
Confidence 36 89999999999998876443
No 104
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=72.42 E-value=3.9 Score=34.69 Aligned_cols=39 Identities=23% Similarity=0.105 Sum_probs=33.3
Q ss_pred CCcEEEEEcCCCCCCHH-HHHHHHHHHHhCCCeEEEEeCcc
Q 012587 5 DHVHVAILPLPAVGHVN-SMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~-p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+++||++...|+ +..+ =.+.+.+.|+++|++|.++.++.
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 456999999998 5555 78999999999999999999844
No 105
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=71.88 E-value=19 Score=32.03 Aligned_cols=39 Identities=23% Similarity=0.350 Sum_probs=31.3
Q ss_pred CcEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
.+|++.++. |+-|--.-...||..|+++|.+|.++-...
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 456555543 688989999999999999999999997643
No 106
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=71.37 E-value=41 Score=27.56 Aligned_cols=139 Identities=10% Similarity=0.127 Sum_probs=75.8
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccc
Q 012587 266 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 345 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~ 345 (460)
-+|+|-|=+||.+ +....+...+.|++++..+-+.+- .....|+.+.+... . .....
T Consensus 21 mkp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~--------SAHRtp~~l~~~~~----------~---a~~~g 77 (181)
T 4b4k_A 21 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVV--------SAHRTPDYMFEYAE----------T---ARERG 77 (181)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHHHHHH----------H---TTTTT
T ss_pred CCccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEE--------ccccChHHHHHHHH----------H---HHhcC
Confidence 3577888899886 667788899999999987755542 12245554432110 0 01112
Q ss_pred cccccccCCh----hHHHHHHHhCCceecccccccc---hhhHHHHHhhhceeeeec----CC---cchHHHHHHHHHHH
Q 012587 346 VGGFLTHCGW----NSTLESIVAGMPMICWPSFADQ---QINSRFVGEVWKLGLDIK----DL---CDRNIVEKAVNDLM 411 (460)
Q Consensus 346 ~~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ---~~na~~~~e~~G~g~~~~----~~---~~~~~l~~~i~~~l 411 (460)
++++|.=.|. .++..+ ..-+|++.+|..... .+.-.-+. ++--|+-+- .. .|+.-++. ++|
T Consensus 78 ~~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSiv-QMP~GvpVaTvaig~~ga~NAallA~---qIL 152 (181)
T 4b4k_A 78 LKVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIGKAGSTNAGLLAA---QIL 152 (181)
T ss_dssp CCEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHH-TCCTTCCCEECCSSHHHHHHHHHHHH---HHH
T ss_pred ceEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHH-hCCCCCceEEEecCCccHHHHHHHHH---HHH
Confidence 2336665553 344433 456899999985432 11111121 222233221 11 22233333 344
Q ss_pred h--HhHHHHHHHHHHHHHHHHHHhh
Q 012587 412 V--ERKEEFMESADRMANLAKKSVN 434 (460)
Q Consensus 412 ~--~~~~~~~~~a~~l~~~~~~~~~ 434 (460)
. | ++++++.+..++.+++.+.
T Consensus 153 a~~d--~~l~~kl~~~r~~~~~~v~ 175 (181)
T 4b4k_A 153 GSFH--DDIHDALELRREAIEKDVR 175 (181)
T ss_dssp TTTC--HHHHHHHHHHHHHHHHHHH
T ss_pred ccCC--HHHHHHHHHHHHHHHHHHH
Confidence 3 6 8899999888888877543
No 107
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=71.27 E-value=2.2 Score=39.60 Aligned_cols=42 Identities=24% Similarity=0.210 Sum_probs=32.1
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
.+|||+|+-.|+.| ..+|..|.++||+|+++......+.+.+
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQT 43 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHH
Confidence 45799999888777 4578899999999999987544444443
No 108
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=70.85 E-value=8.7 Score=37.64 Aligned_cols=92 Identities=11% Similarity=-0.043 Sum_probs=55.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccc-hhHHhhccccccccccCCCCceEEecCCCCCCCCC-CCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY-YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP-RTPD 84 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 84 (460)
.||+++..+. -.+.+++.|.+-|-+|..++++.. .+...+... . +..+.. ....
T Consensus 349 Krv~i~g~~~-----~~~~la~~L~ElGm~vv~~gt~~~~~~d~~~l~~--------~-----------~~~~~~i~~~~ 404 (492)
T 3u7q_A 349 KRVMLYIGGL-----RPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMK--------E-----------MGDSTLLYDDV 404 (492)
T ss_dssp CEEEECBSSS-----HHHHTHHHHHTTTCEEEEEEESSCCHHHHHHHHT--------T-----------SCTTCEEEESC
T ss_pred CEEEEECCCc-----hHHHHHHHHHHCCCEEEEEeCCCCCHHHHHHHHH--------h-----------CCCCcEEEcCC
Confidence 4788754432 356688889899999998776432 222222110 0 000000 0000
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEe
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFR 139 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~ 139 (460)
-...+.+++++. +||++|.... ...+|+++|||++.+.
T Consensus 405 ------------d~~el~~~i~~~--~pDL~ig~~~---~~~ia~k~gIP~~~~~ 442 (492)
T 3u7q_A 405 ------------TGYEFEEFVKRI--KPDLIGSGIK---EKFIFQKMGIPFREMH 442 (492)
T ss_dssp ------------BHHHHHHHHHHH--CCSEEEECHH---HHHHHHHTTCCEEESS
T ss_pred ------------CHHHHHHHHHhc--CCcEEEeCcc---hhHHHHHcCCCEEecc
Confidence 123456777776 9999999743 6789999999999754
No 109
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=70.84 E-value=22 Score=32.43 Aligned_cols=96 Identities=9% Similarity=0.052 Sum_probs=55.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccch-------------hHHhhccccccccccCCCCceEEecC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYY-------------DRVIRHSSDAFSRYMQIPGFQFKTLT 72 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (460)
+|||+|+..|. .....-++|.+.||+|..+.+.... ...++.. ++.+..
T Consensus 3 ~mrIvf~Gt~~-----fa~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~-----------gIpv~~-- 64 (314)
T 1fmt_A 3 SLRIIFAGTPD-----FAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK-----------GLPVFQ-- 64 (314)
T ss_dssp CCEEEEEECSH-----HHHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHT-----------TCCEEC--
T ss_pred CCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHc-----------CCcEEe--
Confidence 47999998764 2345567788889999866653221 1111111 233321
Q ss_pred CCCCCCCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 73 DGLPRDHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
+.. .. .+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 65 ----~~~---~~-------------~~~~~~~l~~~--~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 65 ----PVS---LR-------------PQENQQLVAEL--QADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp ----CSC---SC-------------SHHHHHHHHHT--TCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred ----cCC---CC-------------CHHHHHHHHhc--CCCEEEEeeccccCCHHHHhhccCCEEEEcCC
Confidence 111 00 24456677777 999999876633 3444455556667877776
No 110
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=70.77 E-value=6.1 Score=33.72 Aligned_cols=47 Identities=11% Similarity=0.029 Sum_probs=40.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
..+|++.+.++..|-....-++..|..+|++|.+++..-..+.+.+.
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~ 134 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEA 134 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 45899999999999999999999999999999999875555555443
No 111
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=70.66 E-value=7.5 Score=37.74 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=28.0
Q ss_pred HHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEE
Q 012587 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (460)
Q Consensus 100 ~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~ 138 (460)
.+++++++. +||++|.+.. ...+|+++|||++.+
T Consensus 366 ~le~~i~~~--~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAG--QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHH--TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhc--CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 356777776 9999999865 678999999999985
No 112
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=70.40 E-value=31 Score=29.64 Aligned_cols=150 Identities=13% Similarity=0.046 Sum_probs=80.5
Q ss_pred hhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHh-cCCceeeeecChH
Q 012587 260 WLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEAT-KERGCIAGWVPQE 338 (460)
Q Consensus 260 ~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~vp~~ 338 (460)
|++ -.+++++.|..|.+. ...++.|.+.|.++.++.. .+.+.+.+.. ..++.+...--..
T Consensus 26 fl~-L~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-----------~~~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLD-LKGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-----------TVSAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EEC-CTTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-----------SCCHHHHHHHHTTSCEEECSCCCG
T ss_pred EEE-cCCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-----------CCCHHHHHHHHcCCcEEEECCCCH
Confidence 444 346788889888654 5556777778888877653 1223332211 2345544322234
Q ss_pred hhhcccccccccccCChhHHHHHHHhCCceecccc-cccchhhHH-----HHHhh--hceeeeec--CCcchHHHHHHHH
Q 012587 339 EVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS-FADQQINSR-----FVGEV--WKLGLDIK--DLCDRNIVEKAVN 408 (460)
Q Consensus 339 ~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~-~~DQ~~na~-----~~~e~--~G~g~~~~--~~~~~~~l~~~i~ 408 (460)
..|..+++ +|.--|.-.+.+.++.-.- ..+|. ..|.+..+. .+ ++ +-+|+.-. ...-+..|++.|.
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv-~rg~l~iaIST~G~sP~la~~iR~~ie 162 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQF-SRGRLSLAISTDGASPLLTKRIKEDLS 162 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEE-EETTEEEEEECTTSCHHHHHHHHHHHH
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEE-EeCCEEEEEECCCCCcHHHHHHHHHHH
Confidence 55677776 7777776666655554222 33333 234444432 22 22 23344332 1344566777787
Q ss_pred HHHhHhHHHHHHHHHHHHHHHHHH
Q 012587 409 DLMVERKEEFMESADRMANLAKKS 432 (460)
Q Consensus 409 ~~l~~~~~~~~~~a~~l~~~~~~~ 432 (460)
..|...-..+-+.+.++++++++.
T Consensus 163 ~~lp~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 163 SNYDESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHSCTHHHHHHHHHHHHHHHHHHC
T ss_pred HHccHHHHHHHHHHHHHHHHHHHH
Confidence 777633345667777777777764
No 113
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=70.31 E-value=39 Score=33.24 Aligned_cols=94 Identities=14% Similarity=0.090 Sum_probs=54.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh----HHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD----RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
.||+|+ |+-.-.++|++.|.+-|.+|..+..+...+ .+.+.... .+. ..+..+. .
T Consensus 365 KrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~-~~~---~~~~~v~------------~ 423 (523)
T 3u7q_B 365 KRFALW-----GDPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAA-SPY---GKNATVY------------I 423 (523)
T ss_dssp CEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHT-SGG---GTTCEEE------------E
T ss_pred CEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhh-ccC---CCCcEEE------------E
Confidence 477776 344556788888989999988886533222 22222110 000 0000000 0
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHh-------CCceEEE
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREV-------GVSIIYF 138 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~l-------giP~v~~ 138 (460)
.. -...+.+++++. +||++|.... +..+|+++ |||++.+
T Consensus 424 ~~------------D~~~l~~~i~~~--~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 424 GK------------DLWHLRSLVFTD--KPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp SC------------CHHHHHHHHHHT--CCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred CC------------CHHHHHHHHHhc--CCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 00 124556777776 9999999965 45567777 9999985
No 114
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=70.25 E-value=8.8 Score=33.61 Aligned_cols=34 Identities=9% Similarity=0.125 Sum_probs=20.7
Q ss_pred cEEEEE-cCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 7 VHVAIL-PLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 7 ~~il~~-~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
++|+++ +.|- --..-+-..-..+.++|++|++++
T Consensus 4 ~~vL~v~aHPD-De~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 4 LHILAFGAHAD-DVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp CSEEEEESSTT-HHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEEeCCC-hHHHhHHHHHHHHHHCCCeEEEEE
Confidence 455444 4443 334444455556677999998886
No 115
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=70.09 E-value=3.5 Score=35.54 Aligned_cols=112 Identities=8% Similarity=0.049 Sum_probs=65.8
Q ss_pred CcEEEEEcCCCCCCHHH----HHHHHHHHHhC-CCeEEEEeCccchhHHhhccccccccccCCCCc-eEEecCC-CCCCC
Q 012587 6 HVHVAILPLPAVGHVNS----MLNLAELLGHA-GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGF-QFKTLTD-GLPRD 78 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p----~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~ 78 (460)
|.+|+++.--..|.+.| .+.-|+.|++. |-+|+.++-....+...+.... + +. +.+.+.+ .+..
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~-------~-Gad~v~~v~~~~~~~- 73 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP-------Y-GVDKLHVFDAEGLYP- 73 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG-------G-TCSEEEEEECGGGSS-
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh-------c-CCCEEEEecCccccc-
Confidence 56899998877787776 46778888774 7777776643332222221110 0 11 1222221 0100
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecc
Q 012587 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
.+.. .....+.+++++. +||+|+...... .+..+|.+||+|.+.-++.
T Consensus 74 -----~~~~--------~~a~~l~~~i~~~--~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~~ 124 (217)
T 3ih5_A 74 -----YTSL--------PHTSILVNLFKEE--QPQICLMGATVIGRDLGPRVSSALTSGLTADCTS 124 (217)
T ss_dssp -----CCHH--------HHHHHHHHHHHHH--CCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCSE
T ss_pred -----CCHH--------HHHHHHHHHHHhc--CCCEEEEeCCcchhhHHHHHHHHhCCCccceEEE
Confidence 0111 1234556677776 999999886544 4778899999999886553
No 116
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=70.06 E-value=6.3 Score=29.73 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=29.3
Q ss_pred CcEEEEEcCC---CCCCHHHHHHHHHHHHhC-CC-eEEEEeCcc
Q 012587 6 HVHVAILPLP---AVGHVNSMLNLAELLGHA-GI-KITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~~---~~Gh~~p~l~La~~L~~r-GH-~Vt~~~~~~ 44 (460)
|+|++|+... +.......+.+|..+.+. || +|+++....
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~d 44 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD 44 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEch
Confidence 4567665554 345567789999999999 99 999998744
No 117
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=69.53 E-value=7.6 Score=34.37 Aligned_cols=47 Identities=15% Similarity=0.029 Sum_probs=39.4
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
+..||++.+.++..|-....-++..|..+|++|.+++..-..+.+.+
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~ 168 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLA 168 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHH
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 34699999999999999999999999999999999886444444433
No 118
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=69.51 E-value=3.8 Score=37.61 Aligned_cols=131 Identities=11% Similarity=-0.014 Sum_probs=73.8
Q ss_pred CCcEEEEEecCcc---cCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecC---hHh
Q 012587 266 KQSVIYVSFGSIA---VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVP---QEE 339 (460)
Q Consensus 266 ~~~~V~vs~GS~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp---~~~ 339 (460)
+++.|.+..|+.. ..+.+.+..+++.+.+.++++++..+++ .+......+.+ ...++.+.+-.+ -.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~------~e~~~~~~i~~-~~~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP------HEEERAKRLAE-GFAYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH------HHHHHHHHHHT-TCTTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH------HHHHHHHHHHh-hCCcccccCCCCHHHHHH
Confidence 4677888888754 3456677777777776677766553211 00000111111 112333333222 377
Q ss_pred hhcccccccccccCChhHHHHHHHhCCceecc--cccccchhhHHHHHhhhcee-eee-----c-CCcchHHHHHHHHHH
Q 012587 340 VLAHSAVGGFLTHCGWNSTLESIVAGMPMICW--PSFADQQINSRFVGEVWKLG-LDI-----K-DLCDRNIVEKAVNDL 410 (460)
Q Consensus 340 il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~--P~~~DQ~~na~~~~e~~G~g-~~~-----~-~~~~~~~l~~~i~~~ 410 (460)
++.++++ +|+. -.|+++=|.+.|+|+|++ |..... ++ =+|-. ..+ . ..++.+++.+++.++
T Consensus 250 li~~a~l--~I~~-DSG~~HlAaa~g~P~v~lfg~t~p~~--~~-----P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~ 319 (326)
T 2gt1_A 250 VLAGAKF--VVSV-DTGLSHLTAALDRPNITVYGPTDPGL--IG-----GYGKNQMVCRAPGNELSQLTANAVKQFIEEN 319 (326)
T ss_dssp HHHTCSE--EEEE-SSHHHHHHHHTTCCEEEEESSSCHHH--HC-----CCSSSEEEEECGGGCGGGCCHHHHHHHHHHT
T ss_pred HHHhCCE--EEec-CCcHHHHHHHcCCCEEEEECCCChhh--cC-----CCCCCceEecCCcccccCCCHHHHHHHHHHH
Confidence 8889997 8887 245566677899999988 321111 11 01110 111 1 478999999999999
Q ss_pred HhH
Q 012587 411 MVE 413 (460)
Q Consensus 411 l~~ 413 (460)
|++
T Consensus 320 l~~ 322 (326)
T 2gt1_A 320 AEK 322 (326)
T ss_dssp TTT
T ss_pred HHH
Confidence 874
No 119
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=69.35 E-value=6 Score=33.77 Aligned_cols=40 Identities=13% Similarity=0.112 Sum_probs=33.6
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYY 46 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (460)
+.+||++...|+.+-+. ...|.+.|+++| +|.++.++.-.
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSL 57 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHH
Confidence 34699999999988776 899999999999 99999985533
No 120
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=69.17 E-value=11 Score=29.53 Aligned_cols=101 Identities=10% Similarity=0.079 Sum_probs=66.9
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
+||+|++...- .+=.-++.+|+.|.+. ||++. .+....+.+.+..| +....+..+..+
T Consensus 2 ~~~~ialsv~D--~dK~~~v~~a~~~~~ll~Gf~l~--AT~gTa~~L~e~~G-----------l~v~~v~k~~~e----- 61 (134)
T 2xw6_A 2 HMRALALIAHD--AKKEEMVAFCQRHREVLARFPLV--ATGTTGRRIEEATG-----------LTVEKLLSGPLG----- 61 (134)
T ss_dssp CSCEEEEEECG--GGHHHHHHHHHHTHHHHTTSCEE--ECHHHHHHHHHHHC-----------CCCEECSCGGGT-----
T ss_pred CccEEEEEEec--ccHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHhhC-----------ceEEEEEecCCC-----
Confidence 57899888654 4567789999999999 99654 45577777776344 444433211001
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC--c--------chHHHHHHHhCCceEEEecc
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY--M--------SRAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~--~--------~~~~~~A~~lgiP~v~~~~~ 141 (460)
..+++.+++++ .+.|+||.-.- . ....-+|-.++||+++....
T Consensus 62 --------------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~lat 114 (134)
T 2xw6_A 62 --------------GDQQMGARVAE--GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPMA 114 (134)
T ss_dssp --------------HHHHHHHHHHT--TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSHHH
T ss_pred --------------CcchHHHHHHC--CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCHHH
Confidence 12566777777 49999985332 1 13677889999999984433
No 121
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=68.97 E-value=2.8 Score=39.08 Aligned_cols=43 Identities=19% Similarity=0.225 Sum_probs=29.7
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC-ccchhHHhh
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT-EHYYDRVIR 51 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~-~~~~~~~~~ 51 (460)
|++|||+|+-.|..|. .+|..|.++||+|+++.. +...+.+.+
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r~~~~~~~~~~ 45 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDIDAQRIKEIQD 45 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeCCHHHHHHHHh
Confidence 4568999998776663 478889999999999865 233344443
No 122
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=68.44 E-value=26 Score=34.17 Aligned_cols=109 Identities=16% Similarity=0.123 Sum_probs=65.7
Q ss_pred cee-eeecChH---hhhcccccccccc---cCChh-HHHHHHHhCC-----ceecccccccchhhHHHHHhhhceeeeec
Q 012587 329 GCI-AGWVPQE---EVLAHSAVGGFLT---HCGWN-STLESIVAGM-----PMICWPSFADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 329 ~~~-~~~vp~~---~il~~~~~~~~I~---HGG~g-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~~~e~~G~g~~~~ 395 (460)
+.+ .+++++. .++..+++ ||. .=|.| ++.||+++|+ |+|+--+.+ .+..+ .-|..+
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv- 401 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIV- 401 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEE-
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEE-
Confidence 443 4788865 46678887 553 33554 8999999998 666544322 11111 235555
Q ss_pred CCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhh
Q 012587 396 DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 453 (460)
Q Consensus 396 ~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 453 (460)
...+.+.++++|.++|++....-+++.++..+.+++ -+....++++++.+...
T Consensus 402 ~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 NPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp CTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 456889999999999983112233444444444433 23455677888877665
No 123
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=68.15 E-value=19 Score=30.72 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCC
Q 012587 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (460)
Q Consensus 2 ~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (460)
.+.+++||+++..|+ ||. +.+|.+++.+.+ ++|..+.+........+.+. ..++.+..++..--..
T Consensus 4 ~~~~~~ri~vl~SG~-gsn--l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~--------~~gIp~~~~~~~~~~~- 71 (215)
T 3kcq_A 4 SMKKELRVGVLISGR-GSN--LEALAKAFSTEESSVVISCVISNNAEARGLLIAQ--------SYGIPTFVVKRKPLDI- 71 (215)
T ss_dssp ---CCEEEEEEESSC-CHH--HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHH--------HTTCCEEECCBTTBCH-
T ss_pred CCCCCCEEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHH--------HcCCCEEEeCcccCCh-
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 72 -------------------~~~~~~L~~~--~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 -------------------EHISTVLREH--DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -------------------HHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------------------HHHHHHHHHh--CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
No 124
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=67.86 E-value=53 Score=31.67 Aligned_cols=147 Identities=9% Similarity=-0.018 Sum_probs=78.4
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHh-cCCceeeeecChHhhhccc
Q 012587 266 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEAT-KERGCIAGWVPQEEVLAHS 344 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~vp~~~il~~~ 344 (460)
+++++.|..|... ...++.|.+.|.++.++.. ...+.+.+.. ..++.+..---+...|..+
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~-----------~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~ 73 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNAL-----------TFIPQFTVWANEGMLTLVEGPFDETLLDSC 73 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEES-----------SCCHHHHHHHTTTSCEEEESSCCGGGGTTC
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcC-----------CCCHHHHHHHhcCCEEEEECCCCccccCCc
Confidence 5788888888664 4455677778888776653 1223332211 1345444222233445566
Q ss_pred ccccccccCChhH-----HHHHHHhCCce--ecccccccchhhHHHHHhhhceeeeec-CCcc-hHHHHHHHHHHHhHhH
Q 012587 345 AVGGFLTHCGWNS-----TLESIVAGMPM--ICWPSFADQQINSRFVGEVWKLGLDIK-DLCD-RNIVEKAVNDLMVERK 415 (460)
Q Consensus 345 ~~~~~I~HGG~gs-----~~eal~~GvP~--l~~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~-~~~l~~~i~~~l~~~~ 415 (460)
++ +|.--|.-. ..+|-..|+|+ +--|-..+...-|..-...+-+|+.-. +..+ +..|++.|...|.+.-
T Consensus 74 ~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~~~ 151 (457)
T 1pjq_A 74 WL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQHL 151 (457)
T ss_dssp SE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCTTH
T ss_pred cE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEECCCCChHHHHHHHHHHHHhcchhH
Confidence 66 666666543 44566779996 322322332211100001234566632 3323 5778888888876332
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012587 416 EEFMESADRMANLAKKS 432 (460)
Q Consensus 416 ~~~~~~a~~l~~~~~~~ 432 (460)
..+-+.+.++++++++.
T Consensus 152 ~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 152 GQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 45666666777666664
No 125
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=67.62 E-value=21 Score=32.23 Aligned_cols=38 Identities=16% Similarity=0.341 Sum_probs=30.5
Q ss_pred cEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 7 VHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+|++.++. |+-|--.-...||..|+++|.+|.++-...
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 45544443 688999999999999999999999998643
No 126
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=67.59 E-value=5.1 Score=33.35 Aligned_cols=39 Identities=8% Similarity=-0.003 Sum_probs=32.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYY 46 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (460)
.||++...|+.|=+ =...+.+.|+++|++|.++.++.-.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 48999999987666 6789999999999999999985533
No 127
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=67.52 E-value=5.9 Score=33.72 Aligned_cols=39 Identities=8% Similarity=-0.053 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCCCCCHHH-HHHHHHHHHhCCCeEEEEeCcc
Q 012587 5 DHVHVAILPLPAVGHVNS-MLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p-~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+.+||++...|+ +..+- .+.+.+.|+++|++|.++.++.
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 346999999998 55665 8999999999999999999854
No 128
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=67.35 E-value=2.3 Score=36.64 Aligned_cols=34 Identities=32% Similarity=0.309 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|.||||+|+-.|..| ..+|+.|.++||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 567899999877666 4688999999999998544
No 129
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=67.35 E-value=3.1 Score=37.87 Aligned_cols=33 Identities=24% Similarity=0.445 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.||||+|+-.|..|. .+|..|.++||+|+++..
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 368999998776664 578999999999999875
No 130
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=67.18 E-value=16 Score=31.57 Aligned_cols=39 Identities=10% Similarity=0.134 Sum_probs=30.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHH------HHHHhCC-CeEEEEeCccc
Q 012587 7 VHVAILPLPAVGHVNSMLNLA------ELLGHAG-IKITFLNTEHY 45 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La------~~L~~rG-H~Vt~~~~~~~ 45 (460)
.+.++++.|+.+.++.++.-+ ++|.+.| .+|++.++...
T Consensus 28 ~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~ 73 (224)
T 2jzc_A 28 EKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY 73 (224)
T ss_dssp SCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc
Confidence 466788888888788887765 8898888 78888887443
No 131
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=66.67 E-value=30 Score=31.54 Aligned_cols=33 Identities=9% Similarity=0.133 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|||+|+-.|..+ +..-++|.++||+|..+.+..
T Consensus 3 mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 3 LKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCC
T ss_pred cEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCC
Confidence 699999887544 345688888999998777633
No 132
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=66.52 E-value=12 Score=36.10 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|.||+++..+. -.+.+++++++.|++|.++.+..
T Consensus 6 ~~kiLI~g~g~-----~a~~i~~aa~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 6 IKSILIANRGE-----IALRALRTIKEMGKKAICVYSEA 39 (446)
T ss_dssp CCEEEECCCHH-----HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred cceEEEECCCH-----HHHHHHHHHHHcCCEEEEEEcCc
Confidence 45888864332 46789999999999999886533
No 133
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=66.39 E-value=9.1 Score=33.55 Aligned_cols=40 Identities=15% Similarity=0.196 Sum_probs=29.0
Q ss_pred CCCcEEEEEcCCCCCC-----------HHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 4 QDHVHVAILPLPAVGH-----------VNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh-----------~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|.|+||+++.....+. ..=++.....|++.|++|++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467999988864322 234677788999999999999973
No 134
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=66.20 E-value=16 Score=31.25 Aligned_cols=112 Identities=7% Similarity=-0.013 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC
Q 012587 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR 81 (460)
Q Consensus 2 ~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (460)
.+..|+||+|+..|+...+..++.-.+. ..+++|..+.+.......+.+. ..++.+..++..-...
T Consensus 8 ~~~~~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~Vis~~~a~~~~~A~---------~~gIp~~~~~~~~~~~--- 73 (215)
T 3da8_A 8 PPSAPARLVVLASGTGSLLRSLLDAAVG--DYPARVVAVGVDRECRAAEIAA---------EASVPVFTVRLADHPS--- 73 (215)
T ss_dssp CCCSSEEEEEEESSCCHHHHHHHHHSST--TCSEEEEEEEESSCCHHHHHHH---------HTTCCEEECCGGGSSS---
T ss_pred CCCCCcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEEEEeCCchHHHHHHH---------HcCCCEEEeCcccccc---
Q ss_pred CCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 82 TPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 74 ------------r~~~d~~~~~~l~~~--~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 74 ------------RDAWDVAITAATAAH--EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp ------------HHHHHHHHHHHHHTT--CCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred ------------hhhhhHHHHHHHHhh--CCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
No 135
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=66.15 E-value=7.6 Score=32.52 Aligned_cols=39 Identities=13% Similarity=0.161 Sum_probs=28.1
Q ss_pred CCCcEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l-~La~~L~~rGH~Vt~~~~ 42 (460)
|.||||+++.....|+..-+. .+++.|.+.|++|.++.-
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 567899888877778766554 456777778999988764
No 136
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=66.07 E-value=5.1 Score=36.94 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+.|+||.|+-.|..| +-++|+-|+++||+|+..-.
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 567899999999877 44699999999999999865
No 137
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=65.53 E-value=5.3 Score=30.09 Aligned_cols=41 Identities=17% Similarity=0.173 Sum_probs=29.9
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHH-HHHHHHHhCCCe-EEEEe
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSML-NLAELLGHAGIK-ITFLN 41 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l-~La~~L~~rGH~-Vt~~~ 41 (460)
|+..+|+||+++|..+.|.-.-.- .|-+.+.++|.+ +.+-.
T Consensus 13 ~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~ 55 (110)
T 3czc_A 13 MGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESAS 55 (110)
T ss_dssp -----CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred ccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 345667899999999999988777 777888899988 65443
No 138
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=65.49 E-value=7.1 Score=34.82 Aligned_cols=34 Identities=26% Similarity=0.234 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+||||++. |+ |- =-..|++.|.++||+|+.++.
T Consensus 1 M~~~~ilVt--Ga-G~--iG~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 1 MSLSKILIA--GC-GD--LGLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp -CCCCEEEE--CC-SH--HHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCcEEEE--CC-CH--HHHHHHHHHHHCCCEEEEEeC
Confidence 346788877 35 63 345789999999999999986
No 139
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=65.34 E-value=6.9 Score=35.16 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=32.0
Q ss_pred CCCcEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 4 QDHVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 4 ~~~~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|+|+|++.+.. |+-|--.-...||..|+++|++|.++-...
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 45677766654 688999999999999999999999987644
No 140
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=64.60 E-value=9.4 Score=33.05 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=24.1
Q ss_pred CccEEE-EcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 111 PVNCII-TDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 111 ~pD~vv-~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.||+|| .|...- .+..=|.++|||+|.++.+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 699986 665443 5777799999999998765
No 141
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=64.43 E-value=20 Score=33.21 Aligned_cols=45 Identities=13% Similarity=0.173 Sum_probs=36.0
Q ss_pred CCcEEEEEcC-CCCCCHHHHHHHHHHHH--hCCCeEEEEeCccchhHHh
Q 012587 5 DHVHVAILPL-PAVGHVNSMLNLAELLG--HAGIKITFLNTEHYYDRVI 50 (460)
Q Consensus 5 ~~~~il~~~~-~~~Gh~~p~l~La~~L~--~rGH~Vt~~~~~~~~~~~~ 50 (460)
+.++|+|++. |+-|-..-..+||..|+ ++|++|.++.... ...+.
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~-~~~l~ 63 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP-AHNLS 63 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS-SCHHH
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC-CCChH
Confidence 3457777766 79999999999999999 8999999999853 33443
No 142
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=64.38 E-value=7 Score=32.74 Aligned_cols=37 Identities=11% Similarity=0.178 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l-~La~~L~~rGH~Vt~~~~ 42 (460)
+||||+++... .|+..-+. .+++.|.+.|++|.++.-
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 46899998888 88766655 356667778999988864
No 143
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=64.33 E-value=3.1 Score=32.59 Aligned_cols=37 Identities=16% Similarity=0.268 Sum_probs=24.6
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|++.+|.||+++-.|..| ..+++.|.++|++|+++..
T Consensus 1 m~~~~~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 1 MGRIKNKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp -----CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEES
T ss_pred CCCCcCCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 555556688888654433 4678999999999998865
No 144
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=64.31 E-value=23 Score=36.64 Aligned_cols=114 Identities=16% Similarity=0.070 Sum_probs=75.9
Q ss_pred eecChHhhhcccccccccccCChhHHHHHHHhCCceecccccccchhhH-HHHH---hhhceeeeecCCcchHHHHHHHH
Q 012587 333 GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINS-RFVG---EVWKLGLDIKDLCDRNIVEKAVN 408 (460)
Q Consensus 333 ~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~DQ~~na-~~~~---e~~G~g~~~~~~~~~~~l~~~i~ 408 (460)
++.+-.++|..+++ +||= =.+.+.|.+..++|+|......|+.... +-.- ++.--|.. --+.++|.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~---~~~~~eL~~~i~ 678 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPI---YTEPYGLAKELK 678 (729)
T ss_dssp TCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCE---ESSHHHHHHHHT
T ss_pred CCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCe---ECCHHHHHHHHh
Confidence 55667888988897 8887 4578899999999999987766665331 0000 00111222 357889999998
Q ss_pred HHHh-HhHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhhcC
Q 012587 409 DLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMSS 455 (460)
Q Consensus 409 ~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~ 455 (460)
.... + ..++++.+++.+++-. .+.|.++.+.++.+++.......
T Consensus 679 ~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~~~~~~ 723 (729)
T 3l7i_A 679 NLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDIKEQLE 723 (729)
T ss_dssp THHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHHHHHCC
T ss_pred hhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcCcCccc
Confidence 8876 4 6788888888877754 34466666666666666655433
No 145
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=64.20 E-value=62 Score=27.46 Aligned_cols=103 Identities=9% Similarity=0.058 Sum_probs=59.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCcc-chh--HHhhccccccccccCCCCceEEecCC-CCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEH-YYD--RVIRHSSDAFSRYMQIPGFQFKTLTD-GLPRDHP 80 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 80 (460)
+||+++..+..+ -+-+|.+++.+. +|+|..+.+.. ... ..++.. ++.+..++. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~-----------gIp~~~~~~~~~~---- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA-----------GIATHTLIASAFD---- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT-----------TCEEEECCGGGCS----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc-----------CCcEEEeCccccc----
Confidence 489888887753 356667777665 68887666533 222 122222 366555431 110
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
+ . ....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 63 ----~-r-------~~~~~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 ----S-R-------EAYDRELIHEIDMY--APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ----S-H-------HHHHHHHHHHHGGG--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----c-h-------hhccHHHHHHHHhc--CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 0 0 11224556777777 999999876643 4455556666777877665
No 146
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=64.07 E-value=4.6 Score=34.06 Aligned_cols=41 Identities=10% Similarity=-0.045 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYY 46 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (460)
+..||++...|+.|=.. ...+.+.|.++|++|.++.++.-.
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~ 47 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAE 47 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHH
Confidence 34599999999977776 789999999999999999985433
No 147
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=63.97 E-value=10 Score=32.42 Aligned_cols=47 Identities=15% Similarity=0.113 Sum_probs=40.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
..||++.+.++..|-....-++..|..+|++|.+++..-..+.+.+.
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~ 138 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEE 138 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHH
Confidence 46999999999999999999999999999999999865555555443
No 148
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=63.97 E-value=2.8 Score=39.35 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+|+||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 13 m~M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r 46 (366)
T 1evy_A 13 LYLNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHM 46 (366)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECS
T ss_pred hccCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 445599999888777 4678999999999999875
No 149
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=63.69 E-value=7.9 Score=26.69 Aligned_cols=49 Identities=16% Similarity=0.256 Sum_probs=34.0
Q ss_pred hCCceecccccccchhhHHHHH--hhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 364 AGMPMICWPSFADQQINSRFVG--EVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~~~--e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
.|+|++++-..+.|.+.-..-- .+-|+.-.+-+..++++|...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 6889988877777755432211 234666555578899999999988876
No 150
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=63.40 E-value=59 Score=26.43 Aligned_cols=141 Identities=9% Similarity=0.096 Sum_probs=76.5
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccc
Q 012587 266 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 345 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~ 345 (460)
..|.|-|-+||.+ +....+.....++.+|..+-+.+- ..+.+|+.+.+.. -. .....
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~--------saHR~p~~l~~~~----------~~---a~~~g 67 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVV--------SAHRMPDEMFDYA----------EK---ARERG 67 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHHHHH----------HH---HTTTT
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEE--------ccccCHHHHHHHH----------HH---HHhcC
Confidence 4677888888875 667788899999999988655442 2224565433211 00 01112
Q ss_pred cccccccCC----hhHHHHHHHhCCceecccccccc---hhhH-HHHHhhhceeeeec--C---CcchHHHHHHHHHHHh
Q 012587 346 VGGFLTHCG----WNSTLESIVAGMPMICWPSFADQ---QINS-RFVGEVWKLGLDIK--D---LCDRNIVEKAVNDLMV 412 (460)
Q Consensus 346 ~~~~I~HGG----~gs~~eal~~GvP~l~~P~~~DQ---~~na-~~~~e~~G~g~~~~--~---~~~~~~l~~~i~~~l~ 412 (460)
++++|.=.| ..++..+ ..-+|++.+|..... .+-- ..+.-=.|+.+-.- . ..|+.-++..|-. ++
T Consensus 68 ~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa-~~ 145 (173)
T 4grd_A 68 LRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILS-GN 145 (173)
T ss_dssp CSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHT-TS
T ss_pred CeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHc-CC
Confidence 223665544 2355544 447999999975432 1111 11211124433221 1 2233333332222 23
Q ss_pred HhHHHHHHHHHHHHHHHHHHh
Q 012587 413 ERKEEFMESADRMANLAKKSV 433 (460)
Q Consensus 413 ~~~~~~~~~a~~l~~~~~~~~ 433 (460)
| ++++++.+.++++.++.+
T Consensus 146 d--~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 146 S--VDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp C--HHHHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHHHH
Confidence 6 899999999888887753
No 151
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=63.03 E-value=8.1 Score=34.08 Aligned_cols=41 Identities=10% Similarity=0.195 Sum_probs=34.4
Q ss_pred CCCcEEEEEcCC---CCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 4 QDHVHVAILPLP---AVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 4 ~~~~~il~~~~~---~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|..||.+|++.| +.|-=.-.-.|+.-|+.||++|+..=-++
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DP 63 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccc
Confidence 456899999987 67777888999999999999999986533
No 152
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=62.86 E-value=28 Score=34.33 Aligned_cols=98 Identities=11% Similarity=0.120 Sum_probs=54.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCCh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
.||+++. +-.-.++|++.|.+.|.+|..+......+...+....- + ..+|.+.... .....
T Consensus 361 krv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~~~~~l---------l--~~~~~~~~~~-v~~~~-- 421 (519)
T 1qgu_B 361 KKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKM---------L--DASPYGRDSE-VFINC-- 421 (519)
T ss_dssp CEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHH---------H--HHSTTCTTCE-EEESC--
T ss_pred CEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHH---------H--HhcCCCCCCE-EEECC--
Confidence 4788773 44456788889999999998766534322222110000 0 0000000000 00000
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHh-------CCceEEE
Q 012587 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREV-------GVSIIYF 138 (460)
Q Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~l-------giP~v~~ 138 (460)
-...+.+++++. +||++|.+.. +..+|+++ |||++.+
T Consensus 422 ----------d~~~l~~~i~~~--~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 422 ----------DLWHFRSLMFTR--QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp ----------CHHHHHHHHHHH--CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred ----------CHHHHHHHHhhc--CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 123456667776 9999999864 57778888 9999875
No 153
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=62.70 E-value=36 Score=29.23 Aligned_cols=107 Identities=9% Similarity=0.013 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHHhC-CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCC-------------CCCCC-----
Q 012587 18 GHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTD-------------GLPRD----- 78 (460)
Q Consensus 18 Gh~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~----- 78 (460)
|.+.-.+.+++.+.+. |.+|.+..+ .++..+.+... +.+..++- .....
T Consensus 46 ~~le~av~~a~~~~~~~~~dVIISRG-gta~~Lr~~~~-----------iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg 113 (225)
T 2pju_A 46 LGFEKAVTYIRKKLANERCDAIIAAG-SNGAYLKSRLS-----------VPVILIKPSGYDVLQFLAKAGKLTSSIGVVT 113 (225)
T ss_dssp CCHHHHHHHHHHHTTTSCCSEEEEEH-HHHHHHHTTCS-----------SCEEEECCCHHHHHHHHHHTTCTTSCEEEEE
T ss_pred CcHHHHHHHHHHHHhcCCCeEEEeCC-hHHHHHHhhCC-----------CCEEEecCCHHHHHHHHHHHHhhCCcEEEEe
Confidence 5567778888887665 688776665 77888877543 33333320 00000
Q ss_pred CCCCCCChHHHHHHHHhh--------CcHHHHHHHHcC-CCCccEEEEcCCcchHHHHHHHhCCceEEEec
Q 012587 79 HPRTPDKFPELVDSLNCA--------TPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~~~-~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~ 140 (460)
......... .+..+... ..+.+++.++++ ..+.|+||.|.. +..+|+++|+|.+.+.+
T Consensus 114 ~~~~~~~~~-~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 114 YQETIPALV-AFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp ESSCCHHHH-HHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred CchhhhHHH-HHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 000111112 22222221 234555555555 459999999854 68999999999999884
No 154
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=62.31 E-value=7.3 Score=35.40 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+|.||.|+-.|..|. ++|+.|.++||+|+++-.
T Consensus 2 ~M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CcCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 467999999999984 789999999999999853
No 155
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=61.43 E-value=6.9 Score=35.42 Aligned_cols=37 Identities=11% Similarity=0.216 Sum_probs=28.7
Q ss_pred CcEEEEEcCCCCCC---HHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGH---VNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh---~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||||+|+..+.... ......++++|.++||+|.++..
T Consensus 1 mm~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~ 40 (316)
T 1gsa_A 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEM 40 (316)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECG
T ss_pred CceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEch
Confidence 47999999874221 24457799999999999999876
No 156
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=61.34 E-value=8.4 Score=35.28 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=28.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.++|||+|+-.|..| ..+|+.|.++||+|+++..
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 346799999888888 6789999999999998854
No 157
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=61.26 E-value=4.8 Score=36.96 Aligned_cols=43 Identities=21% Similarity=0.286 Sum_probs=31.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
..+|||+|+-.|+.| ..+|..|++.||+|+++..+...+.+.+
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHH
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHh
Confidence 356899999888877 4578899999999999955444555554
No 158
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=61.15 E-value=30 Score=26.99 Aligned_cols=58 Identities=9% Similarity=-0.068 Sum_probs=38.5
Q ss_pred hCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHH
Q 012587 364 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRM 425 (460)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l 425 (460)
..+|+|++-...+. ....... +.|+--.+.+.++.+.|..+|++++.. ..+++..+++
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~-~~g~~~~l~kP~~~~~L~~~i~~~~~~--~~~~~~~~~~ 131 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAI-QDGAYDFIAKPFAADRLVQSARRAEEK--RRLVMENRSL 131 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHH-HTTCCEEEESSCCHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHH-hcCCCeEEeCCCCHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 47888887654443 3344442 568777777889999999999999875 4444333333
No 159
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=61.11 E-value=11 Score=31.87 Aligned_cols=42 Identities=26% Similarity=0.287 Sum_probs=28.9
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l-~La~~L~~rGH~Vt~~~~ 42 (460)
|..++||||+++.....|+..-+. .+++.|.+.|++|.++.-
T Consensus 1 ~~~~~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 1 MSLTAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp ----CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCcCCCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 444567899888877778766655 456777778999988764
No 160
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=60.91 E-value=32 Score=29.36 Aligned_cols=113 Identities=8% Similarity=0.084 Sum_probs=0.0
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
|+. +++||+++..|....+..++.-.+.= .+++|..+.+........+.+. ..++.+..++..--+.
T Consensus 1 ~~~-~~~riavl~SG~Gsnl~all~~~~~~--~~~eI~~Vis~~~~a~~~~~A~--------~~gIp~~~~~~~~~~~-- 67 (215)
T 3tqr_A 1 MNR-EPLPIVVLISGNGTNLQAIIGAIQKG--LAIEIRAVISNRADAYGLKRAQ--------QADIPTHIIPHEEFPS-- 67 (215)
T ss_dssp ----CCEEEEEEESSCCHHHHHHHHHHHTT--CSEEEEEEEESCTTCHHHHHHH--------HTTCCEEECCGGGSSS--
T ss_pred CCC-CCcEEEEEEeCCcHHHHHHHHHHHcC--CCCEEEEEEeCCcchHHHHHHH--------HcCCCEEEeCccccCc--
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 68 -------------r~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 -------------RTDFESTLQKTIDHY--DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -------------HHHHHHHHHHHHHTT--CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------------hhHhHHHHHHHHHhc--CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
No 161
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.91 E-value=5.8 Score=31.66 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
...||+++-+ |++- ..+++.|.++||+|+++..
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~ 34 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISN 34 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEEC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEEC
Confidence 3458888843 5443 6789999999999999986
No 162
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=60.72 E-value=4 Score=37.35 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCC-eEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGI-KITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH-~Vt~~~~ 42 (460)
++||||.|+-.|..| ..+|+.|.++|| +|+++..
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 457899999887766 478999999999 9998875
No 163
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=60.69 E-value=59 Score=28.02 Aligned_cols=79 Identities=15% Similarity=0.153 Sum_probs=0.0
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
|+.|+++||+++ ..|-.-.-.|...|.+.|+.|..+..
T Consensus 32 m~~m~~~~ILiv----dd~~~~~~~l~~~L~~~g~~v~~~~~-------------------------------------- 69 (249)
T 3q9s_A 32 MGRMNEQRILVI----EDDHDIANVLRMDLTDAGYVVDHADS-------------------------------------- 69 (249)
T ss_dssp -----CCEEEEE----CSCHHHHHHHHHHHHTTTCEEEEESS--------------------------------------
T ss_pred cCCCCCCEEEEE----ECCHHHHHHHHHHHHHCCCEEEEeCC--------------------------------------
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHh----CCceEEEec
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREV----GVSIIYFRT 140 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~l----giP~v~~~~ 140 (460)
..+.+..+... .||+||.|.... .+..+++.+ .+|+|.++.
T Consensus 70 ----------------~~~al~~~~~~---~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~ 116 (249)
T 3q9s_A 70 ----------------AMNGLIKARED---HPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTA 116 (249)
T ss_dssp ----------------HHHHHHHHHHS---CCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEES
T ss_pred ----------------HHHHHHHHhcC---CCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEEC
No 164
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=60.25 E-value=8.2 Score=32.85 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=31.9
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHh-CCCeEEEEeCccch
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGH-AGIKITFLNTEHYY 46 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~-rGH~Vt~~~~~~~~ 46 (460)
+..||++...|+.+=+ -...+.+.|++ +|++|.++.++...
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp SSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGG
T ss_pred CCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHH
Confidence 3469999999997755 46999999999 89999999985533
No 165
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=59.96 E-value=6.7 Score=35.51 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+||||.|+-.|..|. .+|+.|.++||+|+++..
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 578999998888874 678999999999999854
No 166
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=59.63 E-value=68 Score=25.91 Aligned_cols=142 Identities=8% Similarity=0.074 Sum_probs=78.3
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVG 347 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~ 347 (460)
|.|-|-+||.+ +....++....++.+|..+-+.+- ..+..|+.+.+... . +....++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~--------SaHRtp~~l~~~~~----------~---~~~~g~~ 62 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVV--------SAHRTPDKMFDYAE----------T---AKERGLK 62 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEEC--------CTTTCHHHHHHHHH----------H---TTTTTCC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEE--------cCcCCHHHHHHHHH----------H---HHhCCCc
Confidence 55777777775 667788899999999987655542 12245554432110 0 1111223
Q ss_pred cccccCCh----hHHHHHHHhCCceecccccccch-hhHHH---HHhhhceeeeec--C---CcchHHHHHHHHHHHhHh
Q 012587 348 GFLTHCGW----NSTLESIVAGMPMICWPSFADQQ-INSRF---VGEVWKLGLDIK--D---LCDRNIVEKAVNDLMVER 414 (460)
Q Consensus 348 ~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~-~na~~---~~e~~G~g~~~~--~---~~~~~~l~~~i~~~l~~~ 414 (460)
++|.=+|. .++..++ .-+|++.+|...... ..... +.-=.|+++..- . ..++.-+...|..+ .|
T Consensus 63 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~-~d- 139 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQH-TD- 139 (166)
T ss_dssp EEEEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGG-GC-
T ss_pred EEEEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcC-CC-
Confidence 47766664 3444443 368999999853211 11111 211124443332 2 23444444433333 25
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q 012587 415 KEEFMESADRMANLAKKSVNKG 436 (460)
Q Consensus 415 ~~~~~~~a~~l~~~~~~~~~~~ 436 (460)
+.++++.+.+++++++.+.+.
T Consensus 140 -~~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 140 -INIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999988765444
No 167
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=59.45 E-value=9 Score=34.93 Aligned_cols=39 Identities=26% Similarity=0.454 Sum_probs=30.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
|||+|+-.|+.|- .+|..|.++||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAG 41 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHh
Confidence 6999999999884 46889999999999998754 455544
No 168
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=59.33 E-value=5.1 Score=36.83 Aligned_cols=37 Identities=22% Similarity=0.308 Sum_probs=26.8
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|..++++||.|+-.|..| .++|..|+++||+|+++..
T Consensus 1 m~~~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp ------CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 556677899999888777 4788999999999999865
No 169
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=58.96 E-value=15 Score=32.86 Aligned_cols=38 Identities=18% Similarity=0.229 Sum_probs=25.3
Q ss_pred CCCcEEEEEc-CCCCCCHHHHH--HHHHHHHhCCCeEEEEe
Q 012587 4 QDHVHVAILP-LPAVGHVNSML--NLAELLGHAGIKITFLN 41 (460)
Q Consensus 4 ~~~~~il~~~-~~~~Gh~~p~l--~La~~L~~rGH~Vt~~~ 41 (460)
|+.||||++- .|-..-++-.+ ...+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 5667996664 45555555543 46778889999999974
No 170
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=58.81 E-value=19 Score=31.49 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCC----------CC-HHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAV----------GH-VNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~----------Gh-~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+||+++..... |- ..=++.-...|++.|++|+++++
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp 56 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASE 56 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeC
Confidence 579999888742 22 44477778999999999999997
No 171
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=58.64 E-value=14 Score=31.82 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=35.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+++|++..-|+-|-..-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 478999999999999999999999999999998887644
No 172
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=58.58 E-value=6.9 Score=35.68 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=28.8
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
..+||||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 3567899999777666 5789999999999998864
No 173
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=58.46 E-value=1.1e+02 Score=28.43 Aligned_cols=35 Identities=11% Similarity=0.048 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+++||+++..+ .-...+++++++.|++|..+....
T Consensus 10 ~~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 10 AATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TCCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCC
Confidence 45799999543 245778999999999998887643
No 174
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=58.13 E-value=22 Score=34.18 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|.||+++..+ ...+.+++++++.|++|.++.+.
T Consensus 1 ~k~ilI~g~g-----~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 1 MKKVLIANRG-----EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp -CEEEECCCH-----HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CceEEEeCCC-----HHHHHHHHHHHHcCCEEEEEecc
Confidence 3588877532 35678999999999999998753
No 175
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=58.01 E-value=23 Score=32.76 Aligned_cols=99 Identities=17% Similarity=0.146 Sum_probs=56.3
Q ss_pred EEEEEcCCCCCC----HHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 8 HVAILPLPAVGH----VNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 8 ~il~~~~~~~Gh----~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
-|+|.+..+... ..-+..|++.|.++|++|.+++++...+..++.... .. -....+. ..
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~-------~~-~~~~~l~---------g~ 249 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQ-------ME-TKPIVAT---------GK 249 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHT-------CS-SCCEECT---------TC
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHh-------cc-cccEEee---------CC
Confidence 456665554321 335889999999999999998776544433332110 00 0000000 01
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEecc
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~~ 141 (460)
. ...++..+++ +.|++|+.- .....+|..+|+|+|.+...
T Consensus 250 ~------------sl~e~~ali~----~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 250 F------------QLGPLAAAMN----RCNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp C------------CHHHHHHHHH----TCSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred C------------CHHHHHHHHH----hCCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 1 1123344454 468888752 34677799999999997653
No 176
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=57.84 E-value=30 Score=29.57 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=25.2
Q ss_pred CCccEE-EEcCCcc-hHHHHHHHhCCceEEEecch
Q 012587 110 SPVNCI-ITDGYMS-RAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 110 ~~pD~v-v~D~~~~-~~~~~A~~lgiP~v~~~~~~ 142 (460)
..||+| |.|...- .+..=|.++|||+|.++.+-
T Consensus 148 ~~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDTn 182 (218)
T 3r8n_B 148 GLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTN 182 (218)
T ss_dssp SCCCSCEEEETGGGHHHHHHHHHHTCCCEEECCSS
T ss_pred cCCCeEEecCcccccHHHHHHHHhCCCEEEEEeCc
Confidence 478886 5776644 56777999999999987653
No 177
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=57.66 E-value=76 Score=26.88 Aligned_cols=105 Identities=11% Similarity=0.090 Sum_probs=57.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCcc-chh--HHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEH-YYD--RVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
|+||+++..|. |+- +-+|.++..+. ..+|..+.+.. ... ..++.. ++.+..++.. .
T Consensus 2 m~riavl~Sg~-Gsn--l~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~-----------gIp~~~~~~~----~- 62 (211)
T 3p9x_A 2 MKRVAIFASGS-GTN--AEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVH-----------EIPVCALDPK----T- 62 (211)
T ss_dssp -CEEEEECCTT-CHH--HHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTT-----------TCCEEECCGG----G-
T ss_pred CCEEEEEEeCC-chH--HHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHc-----------CCCEEEeChh----h-
Confidence 67999998886 432 45555555432 25777666532 222 222222 3555544320 0
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
..+ .....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 63 --~~~--------r~~~d~~~~~~l~~~--~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpS 112 (211)
T 3p9x_A 63 --YPS--------KEAYEIEVVQQLKEK--QIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPS 112 (211)
T ss_dssp --SSS--------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred --cCc--------hhhhHHHHHHHHHhc--CCCEEEEeCchhhcCHHHHhhccCCeEEECCc
Confidence 001 001224566777787 999999876643 4445555566667776665
No 178
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=57.14 E-value=25 Score=34.77 Aligned_cols=35 Identities=6% Similarity=-0.089 Sum_probs=28.2
Q ss_pred HHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEE
Q 012587 99 PLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (460)
Q Consensus 99 ~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~ 138 (460)
..+.+++++. +||+++.... ...+|+++|||++.+
T Consensus 446 ~el~~~i~~~--~pDl~ig~~~---~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKL--KPDMFFAGIK---EKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHH--CCSEEEECHH---HHHHHHHTTCEEEET
T ss_pred HHHHHHHHhc--CCCEEEcccc---hhHHHHhcCCCEEEe
Confidence 3467778886 9999998743 678899999999975
No 179
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=57.14 E-value=19 Score=31.43 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=29.1
Q ss_pred CCcEEEEEcCCCCC-----------CHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 5 DHVHVAILPLPAVG-----------HVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 5 ~~~~il~~~~~~~G-----------h~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
.|+||+|+.....+ ...=+......|.+.|++|++++..
T Consensus 2 ~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 2 APKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 35699998875322 3345677788899999999999873
No 180
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=56.55 E-value=3.7 Score=37.47 Aligned_cols=41 Identities=15% Similarity=0.379 Sum_probs=30.5
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhC-----C-CeEEEEeCccchhHHhh
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHA-----G-IKITFLNTEHYYDRVIR 51 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~r-----G-H~Vt~~~~~~~~~~~~~ 51 (460)
+|||+|+-.|..|. .+|..|.++ | |+|+++..+...+.+.+
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~ 54 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIRA 54 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHh
Confidence 47999998888774 568888888 9 99999976333444443
No 181
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=56.33 E-value=12 Score=29.45 Aligned_cols=38 Identities=29% Similarity=0.429 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l-~La~~L~~rGH~Vt~~~~~ 43 (460)
||||+++-....|+..-+. .|++.|.++|++|.++...
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 5688888777788876644 4678888899999988653
No 182
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=56.10 E-value=26 Score=33.72 Aligned_cols=42 Identities=12% Similarity=0.295 Sum_probs=35.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD 47 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 47 (460)
+..|+++-.++-|-..-+..||..|+++|++|.+++.+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 346677777899999999999999999999999999755433
No 183
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=55.89 E-value=19 Score=31.13 Aligned_cols=43 Identities=21% Similarity=0.226 Sum_probs=33.2
Q ss_pred HHHHHHHHcCCCCccEEEEcCCcc-------hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSDSKSPVNCIITDGYMS-------RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~~~~~pD~vv~D~~~~-------~~~~~A~~lgiP~v~~~~~ 141 (460)
+.+.+.++.++.+||+|+.|.... .|..+...+|+|+|-+.=+
T Consensus 95 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 144 (237)
T 3goc_A 95 PTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKN 144 (237)
T ss_dssp HHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESS
T ss_pred HHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeecc
Confidence 555666666656899999998865 4778888999999997544
No 184
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=55.84 E-value=8.2 Score=34.62 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=25.8
Q ss_pred CcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||||+|+-. |..| ..+++.|.++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 479999977 7666 4678899999999997754
No 185
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=55.73 E-value=7.2 Score=35.10 Aligned_cols=32 Identities=22% Similarity=0.412 Sum_probs=23.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||++. |+-|-+= -.|++.|.++||+|+.++.
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 687654 3445443 4688999999999999985
No 186
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=55.39 E-value=25 Score=27.10 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=27.0
Q ss_pred cEEEEEcC-CCCC--CHHHHHHHHHHHHhCCCeE-EEEeCcc
Q 012587 7 VHVAILPL-PAVG--HVNSMLNLAELLGHAGIKI-TFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~-~~~G--h~~p~l~La~~L~~rGH~V-t~~~~~~ 44 (460)
||++|+.. +-.| .....+.+|.++.+.||+| .++...+
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 35544443 3343 4567789999999999999 8888744
No 187
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=55.33 E-value=40 Score=28.57 Aligned_cols=110 Identities=13% Similarity=0.051 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCC--CeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR 81 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (460)
|.++||+++..|+ |+. +.+|.+++.+.+ ++|..+.+........+.+. ..++.+..++..--..
T Consensus 5 m~~~ri~vl~SG~-gsn--l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~--------~~gIp~~~~~~~~~~~--- 70 (209)
T 4ds3_A 5 MKRNRVVIFISGG-GSN--MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAE--------AAGIATQVFKRKDFAS--- 70 (209)
T ss_dssp -CCEEEEEEESSC-CHH--HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHH--------HTTCCEEECCGGGSSS---
T ss_pred CCCccEEEEEECC-cHH--HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHH--------HcCCCEEEeCccccCC---
Q ss_pred CCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 82 TPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 71 ------------r~~~d~~~~~~l~~~--~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 ------------KEAHEDAILAALDVL--KPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp ------------HHHHHHHHHHHHHHH--CCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred ------------HHHHHHHHHHHHHhc--CCCEEEEeccccCcCHHHHhhccCCeEEECCc
No 188
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=55.21 E-value=10 Score=34.07 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
+||||+|+-.|..|. .+++.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 367999998887775 46888999999998765
No 189
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=55.16 E-value=86 Score=25.67 Aligned_cols=101 Identities=13% Similarity=0.105 Sum_probs=53.4
Q ss_pred chhhhhhhhcCCCCcEEEEEecC-cccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceee
Q 012587 254 DRSCMAWLDKQPKQSVIYVSFGS-IAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIA 332 (460)
Q Consensus 254 ~~~l~~~l~~~~~~~~V~vs~GS-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 332 (460)
-.++-++|.. +....||-|. .. ......++..+.+-+.|-++... ....+... . +...++
T Consensus 34 A~~lg~~La~---~g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-------~~~~~~~~---~-~~~i~~ 94 (176)
T 2iz6_A 34 ANELGKQIAT---HGWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-------DTSEISDA---V-DIPIVT 94 (176)
T ss_dssp HHHHHHHHHH---TTCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------------CCTT---C-SEEEEC
T ss_pred HHHHHHHHHH---CCCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-------hhhhhccC---C-ceeEEc
Confidence 3456667764 2455566654 33 23444555555565665555321 00111100 0 123344
Q ss_pred eecCh-Hhhhc-ccccccccccCChhHHHH---HHHhCCceeccccc
Q 012587 333 GWVPQ-EEVLA-HSAVGGFLTHCGWNSTLE---SIVAGMPMICWPSF 374 (460)
Q Consensus 333 ~~vp~-~~il~-~~~~~~~I~HGG~gs~~e---al~~GvP~l~~P~~ 374 (460)
+..+. ..++. .++. .++-=||.||+-| ++..++|++++|.+
T Consensus 95 ~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 95 GLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 55554 34443 4443 5777789998655 56799999999983
No 190
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=54.92 E-value=8.8 Score=33.32 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
++|||.|+-.|..|- +||+.|+++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 457999999998885 589999999999998766
No 191
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=54.06 E-value=78 Score=28.55 Aligned_cols=106 Identities=10% Similarity=0.172 Sum_probs=61.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeC-ccchhHHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNT-EHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
.+++||+++..+. || -+-+|..+-.+- +.+|..+.+ ......+++.. ++.+..+|... ..
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~-----------gIp~~~~~~~~--~~- 165 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH-----------DIPYYHVPVDP--KD- 165 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT-----------TCCEEECCCCS--SC-
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc-----------CCCEEEcCCCc--CC-
Confidence 3578999999887 65 344555544332 467777665 23344444443 36666665211 00
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
. . ...+.+.+.+++. +||+||.-.+.. ....+-+.+.-.++-++++
T Consensus 166 ----r-~--------~~~~~~~~~l~~~--~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 166 ----K-E--------PAFAEVSRLVGHH--QADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ----C-H--------HHHHHHHHHHHHT--TCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ----H-H--------HHHHHHHHHHHHh--CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 0 0 0124566777787 999999876643 4445555666667776665
No 192
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=53.79 E-value=27 Score=26.28 Aligned_cols=38 Identities=13% Similarity=0.126 Sum_probs=31.4
Q ss_pred CCCcEEEEEcCCCCCCHHH-HHHHHHHHHhCCCeEEEEe
Q 012587 4 QDHVHVAILPLPAVGHVNS-MLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p-~l~La~~L~~rGH~Vt~~~ 41 (460)
.+|+||+++|..+.|.-.- .-.|-+.+.++|.++.+-.
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 4678999999999999874 6788888999999875544
No 193
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=53.73 E-value=8.6 Score=33.36 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=33.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|||+|..-|+-|--.-...||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 58999777888999999999999999999999997644
No 194
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=53.47 E-value=90 Score=25.41 Aligned_cols=142 Identities=11% Similarity=0.075 Sum_probs=76.9
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVG 347 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~ 347 (460)
+.|-|-+||.+ +....++....++.+|.++-+.+- ..+.+|+.+.+... . .....++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~--------SaHR~p~~~~~~~~----------~---a~~~g~~ 69 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVV--------SAHRTPDRLFSFAE----------Q---AEANGLH 69 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTCHHHHHHHHH----------H---TTTTTCS
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------cccCCHHHHHHHHH----------H---HHhCCCc
Confidence 44666677765 667788899999999988755542 12245554432110 0 0111223
Q ss_pred cccccCCh----hHHHHHHHhCCceecccccccch-hhHHHHH-hh--hceeeeec--C---CcchHHHHHHHHHHHhHh
Q 012587 348 GFLTHCGW----NSTLESIVAGMPMICWPSFADQQ-INSRFVG-EV--WKLGLDIK--D---LCDRNIVEKAVNDLMVER 414 (460)
Q Consensus 348 ~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~-~na~~~~-e~--~G~g~~~~--~---~~~~~~l~~~i~~~l~~~ 414 (460)
++|.=+|. .++..++ .-+|++.+|...... .....+. -+ -|+.+..- . ..++.-+...|..+ .|
T Consensus 70 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~-~d- 146 (174)
T 3kuu_A 70 VIIAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILAL-HD- 146 (174)
T ss_dssp EEEEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHT-TC-
T ss_pred EEEEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcC-CC-
Confidence 37766553 3444443 368999999854211 1122221 01 24322221 1 23344444433333 25
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q 012587 415 KEEFMESADRMANLAKKSVNKG 436 (460)
Q Consensus 415 ~~~~~~~a~~l~~~~~~~~~~~ 436 (460)
+.++++.+.+++++++.+.+.
T Consensus 147 -~~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 147 -TELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHHHHHhC
Confidence 899999999999988765444
No 195
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=53.45 E-value=16 Score=30.26 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHH-HHHHHHHh-CCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSML-NLAELLGH-AGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l-~La~~L~~-rGH~Vt~~~~ 42 (460)
+.||||+++-....|+..-+. .+++.|.+ .|++|.++.-
T Consensus 2 ~~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l 42 (188)
T 2ark_A 2 NAMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHV 42 (188)
T ss_dssp CCCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred CCCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEh
Confidence 468899988887778776655 46777777 8999998875
No 196
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=53.00 E-value=34 Score=31.79 Aligned_cols=36 Identities=8% Similarity=0.047 Sum_probs=23.8
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIR 304 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~ 304 (460)
+.+|+.+.||.+-. .-...+++.|++.|++++|+..
T Consensus 3 ~~i~i~~GGTgGHi--~palala~~L~~~g~~V~~vg~ 38 (365)
T 3s2u_A 3 GNVLIMAGGTGGHV--FPALACAREFQARGYAVHWLGT 38 (365)
T ss_dssp CEEEEECCSSHHHH--HHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcEEEEcCCCHHHH--HHHHHHHHHHHhCCCEEEEEEC
Confidence 45666666675311 1234577889999999988864
No 197
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=52.99 E-value=9.6 Score=34.17 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+++||+|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 456799999777666 4689999999999999764
No 198
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=52.74 E-value=30 Score=33.11 Aligned_cols=26 Identities=8% Similarity=0.027 Sum_probs=20.3
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGI 35 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH 35 (460)
.||||+++-.+++ -.+||+.|++.+.
T Consensus 2 ~~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp -CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CCcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 3789999987754 4578999999875
No 199
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=52.70 E-value=96 Score=25.47 Aligned_cols=142 Identities=10% Similarity=0.130 Sum_probs=79.9
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccccc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 346 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~ 346 (460)
++.|-|-+||.+ +....+.....++.+|.++-+.+- ..+.+|+.+.+... + .....+
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~--------SaHR~p~~l~~~~~----------~---a~~~g~ 77 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIV--------SAHRTPDRLADYAR----------T---AAERGL 77 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTCHHHHHHHHH----------H---TTTTTC
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEE--------cccCCHHHHHHHHH----------H---HHhCCC
Confidence 455667777775 677788899999999988755542 12245554322110 0 001112
Q ss_pred ccccccCCh----hHHHHHHHhCCceecccccccchhhH--HHHH-hh--hceeeee---c--CCcchHHHHHHHHHHHh
Q 012587 347 GGFLTHCGW----NSTLESIVAGMPMICWPSFADQQINS--RFVG-EV--WKLGLDI---K--DLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 347 ~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~~na--~~~~-e~--~G~g~~~---~--~~~~~~~l~~~i~~~l~ 412 (460)
+++|.=+|. .++..++ .-+|++.+|.... ..++ ..+. -+ -|+.+.. + ...++.-+...|.. +.
T Consensus 78 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~-~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla-~~ 154 (182)
T 1u11_A 78 NVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESR-ALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILA-LY 154 (182)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCT-TTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHG-GG
T ss_pred cEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCC-CCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-cC
Confidence 236665553 4555555 4799999998542 1122 1121 12 3555322 1 12444555544442 33
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhcC
Q 012587 413 ERKEEFMESADRMANLAKKSVNKG 436 (460)
Q Consensus 413 ~~~~~~~~~a~~l~~~~~~~~~~~ 436 (460)
| +.++++.+..++++++.+.+.
T Consensus 155 d--~~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 155 N--PALAARLETWRALQTASVPNS 176 (182)
T ss_dssp C--HHHHHHHHHHHHHHHHHSCSS
T ss_pred C--HHHHHHHHHHHHHHHHHHHHh
Confidence 6 899999999999988865444
No 200
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=52.58 E-value=7.9 Score=29.95 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.|||+++-. |.+- ..+++.|.++||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 469988833 5543 4678999999999999875
No 201
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=52.42 E-value=1e+02 Score=28.01 Aligned_cols=109 Identities=12% Similarity=0.122 Sum_probs=57.1
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccccc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 346 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~ 346 (460)
.+.+|..|.+. ...+.++... +.+++.+... -++.... ..+..-+.-+-...+++...++
T Consensus 6 rvgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~-----------~~~~~~~-~a~~~g~~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 6 RIALFGAGRIG-------HVHAANIAANPDLELVVIADP-----------FIEGAQR-LAEANGAEAVASPDEVFARDDI 66 (344)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECS-----------SHHHHHH-HHHTTTCEEESSHHHHTTCSCC
T ss_pred EEEEECCcHHH-------HHHHHHHHhCCCcEEEEEECC-----------CHHHHHH-HHHHcCCceeCCHHHHhcCCCC
Confidence 56778888775 3455566654 4555545421 1222111 1111112344567788874433
Q ss_pred ccccccCC----hhHHHHHHHhCCceec-ccccc--cchhhHHHHHhhhceeeeec
Q 012587 347 GGFLTHCG----WNSTLESIVAGMPMIC-WPSFA--DQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 347 ~~~I~HGG----~gs~~eal~~GvP~l~-~P~~~--DQ~~na~~~~e~~G~g~~~~ 395 (460)
.+++.--- ..-+.+|+.+|+++++ -|+.. ++..-...++++.|+-..+.
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred CEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 33553333 2357789999999876 35443 44333333335667765554
No 202
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=52.41 E-value=68 Score=29.12 Aligned_cols=99 Identities=11% Similarity=0.128 Sum_probs=54.4
Q ss_pred EEEEEcCCCCCC-----HHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCC---ceEEecCCCCCCCC
Q 012587 8 HVAILPLPAVGH-----VNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPG---FQFKTLTDGLPRDH 79 (460)
Q Consensus 8 ~il~~~~~~~Gh-----~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 79 (460)
.|+|.+....+. ..-+..+++.|.++|++|.+++++...+...+.... .+. .....+.
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~-------~~~~~~~~~~~l~------- 247 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAA-------LNTEQQAWCRNLA------- 247 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTT-------SCHHHHTTEEECT-------
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHh-------hhhccccceEecc-------
Confidence 455555442222 236889999999999999988765543332221100 000 0011110
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEec
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~ 140 (460)
... ...++..+++ ..|++|+.- .....+|..+|+|+|.+..
T Consensus 248 --g~~------------sl~e~~ali~----~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 248 --GET------------QLDQAVILIA----ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp --TTS------------CHHHHHHHHH----TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred --CcC------------CHHHHHHHHH----hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 000 1133344554 458888652 3467778899999999764
No 203
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=52.39 E-value=1.1e+02 Score=27.52 Aligned_cols=40 Identities=10% Similarity=0.000 Sum_probs=25.9
Q ss_pred HHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 100 LLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 100 ~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 66 ~~~~~l~~~--~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 66 LWVERIAQL--SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp HHHHHHHHT--CCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhc--CCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 345667777 999999876533 3444444555667777776
No 204
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=52.26 E-value=22 Score=30.59 Aligned_cols=43 Identities=14% Similarity=0.121 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCCCccEEEEcCCcc-------hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSDSKSPVNCIITDGYMS-------RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~~~~~pD~vv~D~~~~-------~~~~~A~~lgiP~v~~~~~ 141 (460)
+.+.+.++.+..+||+|+.|.... .+..+...+|+|+|-+.=.
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 445666667656899999998866 3566777889999997554
No 205
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=51.47 E-value=11 Score=34.33 Aligned_cols=39 Identities=18% Similarity=0.392 Sum_probs=31.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
|||+|+-.|+.|- .+|..|.+.||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKA 41 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHh
Confidence 6999998888774 57888999999999998754 455544
No 206
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=51.23 E-value=23 Score=27.29 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=23.4
Q ss_pred CCCcEEEEEcCCCCCCHH--------HHHHHHHHHHhCCCeEE
Q 012587 4 QDHVHVAILPLPAVGHVN--------SMLNLAELLGHAGIKIT 38 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~--------p~l~La~~L~~rGH~Vt 38 (460)
+-+||.++++.|-.|... .+-..|..|.++||-+.
T Consensus 5 ~~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 5 QGHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp --CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 346778899999888732 23345666889999655
No 207
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=50.87 E-value=8.8 Score=34.76 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
++|+||+|+-.|..|+ .||..|+++||+|+++..
T Consensus 13 ~~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 13 IIVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CCCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 3567999998888776 588899999999998865
No 208
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=50.74 E-value=1.1e+02 Score=25.81 Aligned_cols=107 Identities=7% Similarity=0.139 Sum_probs=0.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (460)
+||+++..|...-+..++ +++.+. +|+|..+.+........+.+. ..++.+..++..-...
T Consensus 1 ~riaVl~SG~Gs~L~aLi---~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~--------~~gIp~~~~~~~~~~~------ 63 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALI---DSTREPNSSAQIDIVISNKAAVAGLDKAE--------RAGIPTRVINHKLYKN------ 63 (209)
T ss_dssp CEEEEEESSSCTTHHHHH---HHHHSTTCSCEEEEEEESSTTCHHHHHHH--------HTTCCEEECCGGGSSS------
T ss_pred CeEEEEEECCchHHHHHH---HHHhcCCCCcEEEEEEeCCCChHHHHHHH--------HcCCCEEEECccccCc------
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.....+.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 64 ---------r~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 64 ---------RVEFDSAIDLVLEEF--SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp ---------HHHHHHHHHHHHHHT--TCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---------hhhhhHHHHHHHHhc--CCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
No 209
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=50.65 E-value=12 Score=33.81 Aligned_cols=29 Identities=34% Similarity=0.528 Sum_probs=25.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
||.|+-.|..|. ++|+.|.++||+|+++-
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 899999998884 78999999999999864
No 210
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=50.44 E-value=18 Score=30.60 Aligned_cols=36 Identities=17% Similarity=0.141 Sum_probs=25.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHH-hCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLG-HAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~-~rGH~Vt~~~~ 42 (460)
+.|||.++++.++ |-+ =.++++.|. ++||+|+.++.
T Consensus 2 ~~mmk~vlVtGas-g~i--G~~~~~~l~~~~g~~V~~~~r 38 (221)
T 3r6d_A 2 NAMYXYITILGAA-GQI--AQXLTATLLTYTDMHITLYGR 38 (221)
T ss_dssp CCSCSEEEEESTT-SHH--HHHHHHHHHHHCCCEEEEEES
T ss_pred CceEEEEEEEeCC-cHH--HHHHHHHHHhcCCceEEEEec
Confidence 3567855555443 322 367899999 89999999875
No 211
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=50.35 E-value=18 Score=30.96 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=30.9
Q ss_pred CcEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|+|++.+.. |+-|-..-...||..|+++|++|.++-...
T Consensus 1 M~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 345544443 688999999999999999999999997643
No 212
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=50.34 E-value=24 Score=31.48 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCC---eEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGI---KITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH---~Vt~~~~ 42 (460)
++|||.|+-.|..| -++++.|.++|| +|+++..
T Consensus 2 ~~~~I~iIG~G~mG-----~aia~~l~~~g~~~~~V~v~dr 37 (280)
T 3tri_A 2 NTSNITFIGGGNMA-----RNIVVGLIANGYDPNRICVTNR 37 (280)
T ss_dssp CCSCEEEESCSHHH-----HHHHHHHHHTTCCGGGEEEECS
T ss_pred CCCEEEEEcccHHH-----HHHHHHHHHCCCCCCeEEEEeC
Confidence 45799999776655 467889999999 9998864
No 213
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=49.59 E-value=97 Score=28.38 Aligned_cols=110 Identities=17% Similarity=0.153 Sum_probs=58.6
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHS 344 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~ 344 (460)
-.+.+|..|.+. ...+.++.+. +.+++.+... .++...+ ..+..-+..+-...+++..+
T Consensus 14 ~rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~-----------~~~~~~~-~~~~~~~~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 14 IRFALVGCGRIA-------NNHFGALEKHADRAELIDVCDI-----------DPAALKA-AVERTGARGHASLTDMLAQT 74 (354)
T ss_dssp EEEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECS-----------SHHHHHH-HHHHHCCEEESCHHHHHHHC
T ss_pred ceEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcC-----------CHHHHHH-HHHHcCCceeCCHHHHhcCC
Confidence 468889999886 3455666665 4555555521 1222111 11111123455678888744
Q ss_pred ccccccccCC----hhHHHHHHHhCCceec-ccccc--cchhhHHHHHhhhceeeeec
Q 012587 345 AVGGFLTHCG----WNSTLESIVAGMPMIC-WPSFA--DQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 345 ~~~~~I~HGG----~gs~~eal~~GvP~l~-~P~~~--DQ~~na~~~~e~~G~g~~~~ 395 (460)
++.+++---- ..-+.+|+.+|+++++ -|+.. ++-.-...++++.|+-+.+.
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~ 132 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVV 132 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 3333443222 2457789999999887 36533 34333333335667766554
No 214
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=49.37 E-value=60 Score=24.53 Aligned_cols=62 Identities=5% Similarity=-0.054 Sum_probs=36.2
Q ss_pred hCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 012587 364 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANL 428 (460)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~ 428 (460)
..+|.+++-...|.......+ +..|+--.+.+.++.++|..+|++++.. ....+..+++.+.
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~~--~~~~~~~~~~~~~ 132 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAI-NDAGIHQFLTKPWHPEQLLSSARNAARM--FTLARENERLSLE 132 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHH-HhhchhhhccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 356777765444433333333 2334645565889999999999999874 3333333344333
No 215
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=49.36 E-value=37 Score=32.52 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.||+++.. | ...+.+++++++.|++|.++.+
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~ 33 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKELGIKTVAVHS 33 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEE
T ss_pred ceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEec
Confidence 47887753 3 3567899999999999998865
No 216
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=49.34 E-value=39 Score=28.54 Aligned_cols=49 Identities=6% Similarity=-0.170 Sum_probs=36.0
Q ss_pred chhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEE
Q 012587 254 DRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWV 302 (460)
Q Consensus 254 ~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~ 302 (460)
.+-+.+|+....++.++||..+|........+..+.++++++|+.+.+.
T Consensus 15 ~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 15 VPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3445667754556899999988775445567888999999999875543
No 217
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=49.00 E-value=1.5e+02 Score=26.65 Aligned_cols=34 Identities=9% Similarity=0.183 Sum_probs=19.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
+++|||++.- +-|.+ -..|++.|.++|+++.+++
T Consensus 22 ~~~~~vlVtG--atG~i--G~~l~~~L~~~g~~~~v~~ 55 (346)
T 4egb_A 22 SNAMNILVTG--GAGFI--GSNFVHYMLQSYETYKIIN 55 (346)
T ss_dssp --CEEEEEET--TTSHH--HHHHHHHHHHHCTTEEEEE
T ss_pred cCCCeEEEEC--CccHH--HHHHHHHHHhhCCCcEEEE
Confidence 4557766553 33433 3478899999995444443
No 218
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=48.95 E-value=17 Score=31.43 Aligned_cols=39 Identities=3% Similarity=-0.101 Sum_probs=25.7
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|..+...|+++++.++.| =-.++++.|.++|++|.++..
T Consensus 1 M~~~~~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp -----CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CCccCCCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeC
Confidence 444444567777766643 346889999999999998875
No 219
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=48.67 E-value=1.1e+02 Score=24.95 Aligned_cols=139 Identities=9% Similarity=0.066 Sum_probs=76.9
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccc
Q 012587 266 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 345 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~ 345 (460)
.++.|-|-+||.+ +....+.....++.+|.++-+.+- ..+.+|+.+.+.. -.. --..++
T Consensus 6 ~~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~--------SaHR~p~~~~~~~----------~~a-~~~g~~ 64 (174)
T 3lp6_A 6 ERPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVV--------SAHRTPEAMFSYA----------RGA-AARGLE 64 (174)
T ss_dssp CCCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTCHHHHHHHH----------HHH-HHHTCC
T ss_pred CCCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEE--------CCCCCHHHHHHHH----------HHH-HhCCCC
Confidence 3455667777765 667788899999999988755542 1224555433210 000 001233
Q ss_pred cccccccCCh----hHHHHHHHhCCceecccccccchhhH--HH---HHhhhceeeeec---CCcchHHHHHHHHHHHhH
Q 012587 346 VGGFLTHCGW----NSTLESIVAGMPMICWPSFADQQINS--RF---VGEVWKLGLDIK---DLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 346 ~~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~~na--~~---~~e~~G~g~~~~---~~~~~~~l~~~i~~~l~~ 413 (460)
+ +|.=+|. .++..++ .-+|++.+|..... .++ .. +..=-|+.+..- ...++.-+...|..+- |
T Consensus 65 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~-l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~-d 139 (174)
T 3lp6_A 65 V--IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGR-LDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAA-N 139 (174)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSS-GGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTT-C
T ss_pred E--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCC-CCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCC-C
Confidence 3 6665553 4555554 56899999975322 222 11 211124322221 3345555554444332 5
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 012587 414 RKEEFMESADRMANLAKKS 432 (460)
Q Consensus 414 ~~~~~~~~a~~l~~~~~~~ 432 (460)
+.++++.+.+++++++.
T Consensus 140 --~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 140 --PQLRARIVAFQDRLADV 156 (174)
T ss_dssp --HHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 88999999999888875
No 220
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=48.38 E-value=22 Score=30.62 Aligned_cols=38 Identities=24% Similarity=0.229 Sum_probs=30.7
Q ss_pred CCCcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 4 QDHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 4 ~~~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
++|..|+|... ..-|-..-+..|++.|+++|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 45555555555 588999999999999999999999974
No 221
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=48.37 E-value=27 Score=26.04 Aligned_cols=36 Identities=6% Similarity=0.049 Sum_probs=28.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
.|||+++|..+.|+-.-.-.|-+.+.++|.++.+-.
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~ 39 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEA 39 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 479999999999998656677888888898876543
No 222
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=48.25 E-value=12 Score=33.64 Aligned_cols=32 Identities=28% Similarity=0.327 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+||.|+-.|..|. .+|+.|.++||+|+++..
T Consensus 1 M~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 1 MTTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHHHHTCCEEEECS
T ss_pred CCeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcC
Confidence 57999998888874 578999999999999864
No 223
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=47.57 E-value=1.1e+02 Score=24.59 Aligned_cols=137 Identities=10% Similarity=0.097 Sum_probs=74.2
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccc-cc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHS-AV 346 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~-~~ 346 (460)
|.|-|-+||.+ +....++....++.+|.++-+.+- ..+.+|+.+.+.. .. .... ..
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~--------saHR~p~~~~~~~----------~~---a~~~~~~ 59 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIG--------SAHKTAEHVVSML----------KE---YEALDRP 59 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEEC--------CTTTCHHHHHHHH----------HH---HHTSCSC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------cccCCHHHHHHHH----------HH---hhhcCCC
Confidence 45666677765 667788888999999987655442 1224555433211 00 0111 13
Q ss_pred ccccccCCh----hHHHHHHHhCCceeccccccc---chh-hHHHHHhhhceeeee-cCCcchHHHHHHHHHHHhHhHHH
Q 012587 347 GGFLTHCGW----NSTLESIVAGMPMICWPSFAD---QQI-NSRFVGEVWKLGLDI-KDLCDRNIVEKAVNDLMVERKEE 417 (460)
Q Consensus 347 ~~~I~HGG~----gs~~eal~~GvP~l~~P~~~D---Q~~-na~~~~e~~G~g~~~-~~~~~~~~l~~~i~~~l~~~~~~ 417 (460)
+++|.=+|. .++..++ .-+|++.+|...- -.+ ++ .+.---|+.+.- +...++.-+...|..+ .| +.
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS-~vqmp~GvpVatv~~~~nAa~lA~~Il~~-~d--~~ 134 (159)
T 3rg8_A 60 KLYITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYS-SLRMPSGISPALVLEPKNAALLAARIFSL-YD--KE 134 (159)
T ss_dssp EEEEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHH-HHCCCTTCCCEECCSHHHHHHHHHHHHTT-TC--HH
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHH-HHhCCCCCceEEecCchHHHHHHHHHHhC-CC--HH
Confidence 347766663 3555444 5689999996431 111 22 121011444322 2334444444433333 25 88
Q ss_pred HHHHHHHHHHHHHHH
Q 012587 418 FMESADRMANLAKKS 432 (460)
Q Consensus 418 ~~~~a~~l~~~~~~~ 432 (460)
++++.+..++++++.
T Consensus 135 l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 135 IADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998888887764
No 224
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=47.31 E-value=1.3e+02 Score=25.56 Aligned_cols=79 Identities=13% Similarity=0.182 Sum_probs=0.0
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
+.+++++||+++ ..|-.-.-.|...|.+.|++|..+..
T Consensus 18 ~~~~~~~~ILiv----dd~~~~~~~l~~~L~~~g~~v~~~~~-------------------------------------- 55 (250)
T 3r0j_A 18 ENTTPEARVLVV----DDEANIVELLSVSLKFQGFEVYTATN-------------------------------------- 55 (250)
T ss_dssp --CCSSCEEEEE----CSCHHHHHHHHHHHHHTTCEEEEESS--------------------------------------
T ss_pred CCCCCCceEEEE----ECCHHHHHHHHHHHHHCCCEEEEECC--------------------------------------
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHh-----CCceEEEec
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREV-----GVSIIYFRT 140 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~l-----giP~v~~~~ 140 (460)
..+.+..+-.. +||+||.|.... .+..+++.+ .+|+|.++.
T Consensus 56 ----------------~~~al~~~~~~---~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~ 103 (250)
T 3r0j_A 56 ----------------GAQALDRARET---RPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTA 103 (250)
T ss_dssp ----------------HHHHHHHHHHH---CCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred ----------------HHHHHHHHHhC---CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEC
No 225
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=47.30 E-value=17 Score=28.85 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+.++|+++-.|..| ..+++.|.++|++|+++..
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~ 50 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDK 50 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEEC
Confidence 44789988554433 5678999999999999875
No 226
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=47.21 E-value=22 Score=28.15 Aligned_cols=43 Identities=9% Similarity=0.125 Sum_probs=32.5
Q ss_pred EEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHh
Q 012587 8 HVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVI 50 (460)
Q Consensus 8 ~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 50 (460)
|++|+.. +..-.+++.+.+|...+..|++|+++.+..-...+.
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~ 52 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAIT 52 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTB
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHh
Confidence 6655444 677788899999999999999999999844443443
No 227
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=47.11 E-value=13 Score=27.49 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCC-CeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rG-H~Vt~~~~ 42 (460)
.+++|+++-. |.+ -..+++.|.++| |+|+++..
T Consensus 4 ~~~~v~I~G~---G~i--G~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 4 MRWNICVVGA---GKI--GQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp TCEEEEEECC---SHH--HHHHHHHHHHCSSEEEEEEES
T ss_pred CcCeEEEECC---CHH--HHHHHHHHHhCCCceEEEEeC
Confidence 3568888744 433 246889999999 99988875
No 228
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=47.04 E-value=23 Score=30.74 Aligned_cols=43 Identities=23% Similarity=0.210 Sum_probs=32.2
Q ss_pred HHHHHHHHcCCCCccEEEEcCCcc-------hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSDSKSPVNCIITDGYMS-------RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~~~~~pD~vv~D~~~~-------~~~~~A~~lgiP~v~~~~~ 141 (460)
+.+.+.++.+..+||+|+.|.... .|..+.-.+|+|+|-+.=+
T Consensus 97 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 146 (246)
T 3ga2_A 97 PLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKT 146 (246)
T ss_dssp HHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred HHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeecc
Confidence 445555666655899999998755 4777788999999997543
No 229
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=46.34 E-value=9.7 Score=35.56 Aligned_cols=34 Identities=12% Similarity=0.295 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+++|||+|+-.|..| ..+|+.|.++||+|+++..
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 455899999777655 4788999999999998864
No 230
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=46.33 E-value=19 Score=34.98 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=30.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CC-eEEEEeCcc
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA-GI-KITFLNTEH 44 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH-~Vt~~~~~~ 44 (460)
+++|||.|+-.|..| +++|..|+++ || +|+++....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 567899999999888 5789999999 99 999987533
No 231
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=46.18 E-value=7.6 Score=32.50 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=21.1
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeE
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSML-NLAELLGHAGIKI 37 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l-~La~~L~~rGH~V 37 (460)
|.++.||||+++-+...|+..-+. .|++.|.+.|++|
T Consensus 1 ~~~~~~~kiliiy~S~~GnT~~lA~~ia~~l~~~~~~v 38 (193)
T 3d7n_A 1 MTTNSSSNTVVVYHSGYGHTHRMAEAVAEGAEATLHAI 38 (193)
T ss_dssp -----CCCEEEEECCSSSHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCCCCEEEEEEECCChHHHHHHHHHHHHhhhcceEe
Confidence 677889999999888888866544 3355555444433
No 232
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=46.12 E-value=1.1e+02 Score=24.20 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=54.4
Q ss_pred EEEEEcCCCCC---CHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCC
Q 012587 8 HVAILPLPAVG---HVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 8 ~il~~~~~~~G---h~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (460)
++++++.|+.| .-.-+..+.++|.+.+.++.+++.....+.+ ..++.+..+
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~-------------~~~v~~~~~------------- 75 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTL-------------GLNTRLYKW------------- 75 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTC-------------CTTEEEESS-------------
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccC-------------CCcEEEecC-------------
Confidence 57788888887 4445667888888888888888763321100 112222211
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEec
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~ 140 (460)
.+. .+++.. ...|++|+... .....=|-.+|+|.|.+..
T Consensus 76 -------------~~~-~~~l~~--~~ad~~I~~~G-~~t~~Ea~~~G~P~i~~p~ 114 (170)
T 2o6l_A 76 -------------IPQ-NDLLGH--PKTRAFITHGG-ANGIYEAIYHGIPMVGIPL 114 (170)
T ss_dssp -------------CCH-HHHHTS--TTEEEEEECCC-HHHHHHHHHHTCCEEECCC
T ss_pred -------------CCH-HHHhcC--CCcCEEEEcCC-ccHHHHHHHcCCCEEeccc
Confidence 111 234432 27899998643 3455557788999999754
No 233
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=46.08 E-value=1.9e+02 Score=27.18 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
++||+++..+ .-...++++++++||+|..+....
T Consensus 19 ~~~ili~g~g-----~~g~~~~~a~~~~G~~v~~v~~~~ 52 (433)
T 2dwc_A 19 AQKILLLGSG-----ELGKEIAIEAQRLGVEVVAVDRYA 52 (433)
T ss_dssp CCEEEEESCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEECCC
Confidence 4699998543 245678999999999999887644
No 234
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=45.92 E-value=17 Score=32.80 Aligned_cols=40 Identities=13% Similarity=0.115 Sum_probs=24.2
Q ss_pred CCCCCCc-EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 1 MEKQDHV-HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 1 ~~~~~~~-~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|.++.|+ +|++. |+.|.+ -..|+++|.++||+|+.++...
T Consensus 5 m~~~~m~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 5 MEENGMKSKILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp ----CCCCCEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred ccccCCCCeEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 4444454 55554 333433 3578899999999999988643
No 235
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=45.84 E-value=90 Score=26.64 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=32.4
Q ss_pred cEEEEEcCC-CCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 7 VHVAILPLP-AVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~~-~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
..|.+++.+ +-|--.-.+.++..+..+|.+|.++.+..
T Consensus 12 G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred cEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 467777776 99999999999999999999999997644
No 236
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=45.81 E-value=1.6e+02 Score=26.98 Aligned_cols=109 Identities=15% Similarity=0.133 Sum_probs=57.6
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 345 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~ 345 (460)
-.+.+|.+|.+. ...+.++... +.+++.+.. ..++........++ .-+-...++|..++
T Consensus 6 ~~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d-----------~~~~~~~~a~~~g~--~~~~~~~~ll~~~~ 65 (359)
T 3e18_A 6 YQLVIVGYGGMG-------SYHVTLASAADNLEVHGVFD-----------ILAEKREAAAQKGL--KIYESYEAVLADEK 65 (359)
T ss_dssp EEEEEECCSHHH-------HHHHHHHHTSTTEEEEEEEC-----------SSHHHHHHHHTTTC--CBCSCHHHHHHCTT
T ss_pred CcEEEECcCHHH-------HHHHHHHHhCCCcEEEEEEc-----------CCHHHHHHHHhcCC--ceeCCHHHHhcCCC
Confidence 357788888775 2344556655 455554442 11222111111222 23456678887554
Q ss_pred cccccccCCh----hHHHHHHHhCCceec-cccc--ccchhhHHHHHhhhceeeeec
Q 012587 346 VGGFLTHCGW----NSTLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 346 ~~~~I~HGG~----gs~~eal~~GvP~l~-~P~~--~DQ~~na~~~~e~~G~g~~~~ 395 (460)
+.+++--.-. .-+.+|+.+|+++++ -|+. .++..-...++++.|+-+.+.
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (359)
T 3e18_A 66 VDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVH 122 (359)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 4445543332 357789999999987 3543 344443334445667655553
No 237
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=45.65 E-value=27 Score=30.53 Aligned_cols=39 Identities=21% Similarity=0.154 Sum_probs=27.2
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|.+..++|.++++.++.| =-.++++.|.++|++|.++..
T Consensus 1 M~~~~~~k~vlVTGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 1 MSLGRFVRHALITAGTKG---LGKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp -----CCCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcccccCEEEEeCCCch---hHHHHHHHHHHCCCEEEEEcC
Confidence 555556788888887643 235889999999999999865
No 238
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=45.58 E-value=17 Score=29.31 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=30.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccch
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYY 46 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (460)
.++++++.|+ | +-|++++++.|.++|.+|+++ .....
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 4788888776 3 999999999999999999999 65544
No 239
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=45.55 E-value=28 Score=30.48 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=27.0
Q ss_pred CCCCcEEEEEcCCCC--CCHHHHHH-HHHHHHhCCCeEEEEeC
Q 012587 3 KQDHVHVAILPLPAV--GHVNSMLN-LAELLGHAGIKITFLNT 42 (460)
Q Consensus 3 ~~~~~~il~~~~~~~--Gh~~p~l~-La~~L~~rGH~Vt~~~~ 42 (460)
.+.||||+++....+ |.-.-++. +++.|.+.|++|.++--
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 356789988887654 44444443 56667778999988753
No 240
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=45.44 E-value=1.5e+02 Score=25.59 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=25.0
Q ss_pred cHHHHHHHHcCCCCccEEEEcCCcc-----hHHHHHHHhCCceEE
Q 012587 98 PPLLKEMVSDSKSPVNCIITDGYMS-----RAIDAAREVGVSIIY 137 (460)
Q Consensus 98 ~~~l~~~~~~~~~~pD~vv~D~~~~-----~~~~~A~~lgiP~v~ 137 (460)
.+.+.+.++.+ ..+.|++..+.. +.-.++..+|+..+.
T Consensus 79 ~e~l~~~l~~~--~i~~vv~Gdi~s~yqr~r~e~vc~~~gl~~~~ 121 (237)
T 3rjz_A 79 VEDLKRVLSGL--KIQGIVAGALASKYQRKRIEKVAKELGLEVYT 121 (237)
T ss_dssp HHHHHHHHTTS--CCSEEECC---CCSHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHHhc--CCcEEEECCcchHHHHHHHHHHHHHcCCEEEc
Confidence 35566667666 788888766654 577888889887665
No 241
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=45.28 E-value=66 Score=28.77 Aligned_cols=106 Identities=10% Similarity=0.137 Sum_probs=61.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeC-ccchhHHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNT-EHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
.+++||+++..+. || -+-+|..+-.+- ..+|..+.+ ......+++..| +.+..+|...
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~g-----------Ip~~~~~~~~----- 148 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHK-----------IPYYHFALDP----- 148 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTT-----------CCEEECCCBT-----
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcC-----------CCEEEeCCCc-----
Confidence 3467999998887 54 334444443332 367776654 333444544433 7777665311
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.+ .. ...+.+.+.+++. +||+||.-.+.. ....+-+.+.-.++-++++
T Consensus 149 ---~~-r~-------~~~~~~~~~l~~~--~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 149 ---KD-KP-------GQERKVLQVIEET--GAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp ---TB-HH-------HHHHHHHHHHHHH--TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred ---CC-HH-------HHHHHHHHHHHhc--CCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 01 10 1124566777777 999999876643 4555566666677777665
No 242
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=45.28 E-value=10 Score=34.29 Aligned_cols=33 Identities=24% Similarity=0.264 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+|||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 35799999777766 4689999999999999864
No 243
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=45.22 E-value=13 Score=33.96 Aligned_cols=37 Identities=19% Similarity=0.073 Sum_probs=27.9
Q ss_pred EEEEcCCCCCCHH--------------HHHHHHHHHHhCCCeEEEEeCccc
Q 012587 9 VAILPLPAVGHVN--------------SMLNLAELLGHAGIKITFLNTEHY 45 (460)
Q Consensus 9 il~~~~~~~Gh~~--------------p~l~La~~L~~rGH~Vt~~~~~~~ 45 (460)
|++.+.|++=.+. .-.+||+++.++|++|++++++..
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 6666666654442 456899999999999999997543
No 244
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=45.16 E-value=20 Score=32.12 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
++|||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 357999998887775 468889999999987754
No 245
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=44.81 E-value=27 Score=28.94 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCCCHHHHH-HHHHHHHh-CCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSML-NLAELLGH-AGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l-~La~~L~~-rGH~Vt~~~~ 42 (460)
||||+++.....|+..-+. .+++.|.+ .|++|.++.-
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l 39 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRV 39 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEEC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEc
Confidence 5799888877778776655 45677777 8999988764
No 246
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=44.71 E-value=81 Score=28.26 Aligned_cols=106 Identities=12% Similarity=0.134 Sum_probs=61.7
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeC-ccchhHHhhccccccccccCCCCceEEecCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNT-EHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (460)
.+++||+++..+. || -+-+|..+-.+- ..+|..+.+ ......+++..| +.+..+|...
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~g-----------Ip~~~~~~~~----- 153 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHG-----------LPFRHFPITA----- 153 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTT-----------CCEEECCCCS-----
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcC-----------CCEEEeCCCc-----
Confidence 3467999998776 65 344444443332 367776664 333444444433 7777665321
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 81 RTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.+ .. ...+.+.+.+++. +||+||.-.+.. ....+-+.+.-.++-++++
T Consensus 154 ---~~-r~-------~~~~~~~~~l~~~--~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 154 ---DT-KA-------QQEAQWLDVFETS--GAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp ---SC-HH-------HHHHHHHHHHHHH--TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ---CC-HH-------HHHHHHHHHHHHh--CCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 01 10 1124566777777 999999876643 4555566666677777665
No 247
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=44.48 E-value=12 Score=34.98 Aligned_cols=33 Identities=27% Similarity=0.282 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+|||.|+-.|..|. ++|..|+++||+|+++..
T Consensus 28 ~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r 60 (356)
T 3k96_A 28 FKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSY 60 (356)
T ss_dssp CCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECS
T ss_pred cCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 357999999888774 689999999999999986
No 248
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=44.34 E-value=16 Score=31.98 Aligned_cols=38 Identities=11% Similarity=0.218 Sum_probs=32.0
Q ss_pred CCcEEEEEcCC---CCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLP---AVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~---~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
++||.+|++.| +.|-=.-.-.|+.-|+.||++||..=-
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~Ki 61 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKI 61 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEec
Confidence 35799999987 667778888999999999999998754
No 249
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=44.28 E-value=17 Score=31.88 Aligned_cols=44 Identities=20% Similarity=0.366 Sum_probs=30.8
Q ss_pred CCCCCCcEEEEEc-CCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 1 MEKQDHVHVAILP-LPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 1 ~~~~~~~~il~~~-~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|...+|..|+|.. -|+-|-..-...||..|+++|++|.++-...
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4554443444543 3678888899999999999999999997644
No 250
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=44.07 E-value=22 Score=30.10 Aligned_cols=38 Identities=8% Similarity=-0.002 Sum_probs=23.4
Q ss_pred CCcEEEEEcCCCC-CCHHHHHH----HHHHHHhC--CCeEEEEeC
Q 012587 5 DHVHVAILPLPAV-GHVNSMLN----LAELLGHA--GIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~-Gh~~p~l~----La~~L~~r--GH~Vt~~~~ 42 (460)
.||||+++...-+ |.-.-... +.+.|.++ ||+|+++--
T Consensus 3 mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL 47 (211)
T 3p0r_A 3 AMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDL 47 (211)
T ss_dssp -CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEG
T ss_pred ccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 3789988877655 33333333 34555555 899988753
No 251
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=43.82 E-value=21 Score=32.01 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=25.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 6999998887774 468889999999987754
No 252
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=43.77 E-value=13 Score=34.91 Aligned_cols=29 Identities=38% Similarity=0.448 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFL 40 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~ 40 (460)
|||+|+-.|--| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 699998776434 78899999999999998
No 253
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=43.67 E-value=27 Score=29.89 Aligned_cols=39 Identities=21% Similarity=0.274 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCC-----CCCHHHHH--HHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPA-----VGHVNSML--NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~-----~Gh~~p~l--~La~~L~~rGH~Vt~~~~ 42 (460)
++||||+++...- .|-++-.+ .+++.|.+.||+|.++--
T Consensus 23 ~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 23 NAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp -CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred ccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 5788998877543 23344433 356667778999998764
No 254
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=43.55 E-value=24 Score=30.90 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=32.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|+.|.|..-|+-|--.-...||..|+++|++|.++-..
T Consensus 1 M~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 34667766688999999999999999999999998653
No 255
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=43.47 E-value=21 Score=28.02 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=31.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD 47 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 47 (460)
.++++++.|+ =+-|++++++.|.++|.+|+++ .....+
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~~ 56 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFEP 56 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEGG
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCHH
Confidence 4788888776 4899999999999999999999 645433
No 256
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=43.44 E-value=22 Score=33.37 Aligned_cols=38 Identities=13% Similarity=0.086 Sum_probs=29.1
Q ss_pred CCcEEEEEcCCCCCCH----HHHHHHHHHH-HhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHV----NSMLNLAELL-GHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~----~p~l~La~~L-~~rGH~Vt~~~~ 42 (460)
.+|||+++..|-.+-. .....+.++| .++||+|+.+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 3579999988755532 3467888999 999999999864
No 257
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=42.70 E-value=25 Score=30.13 Aligned_cols=39 Identities=10% Similarity=0.036 Sum_probs=23.5
Q ss_pred CCCcEEEEEcCCCC--CCHHHHHHH----HHHHHhC--CC-eEEEEeC
Q 012587 4 QDHVHVAILPLPAV--GHVNSMLNL----AELLGHA--GI-KITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~--Gh~~p~l~L----a~~L~~r--GH-~Vt~~~~ 42 (460)
|.||||+++...-+ |.-.-...| .+.|.++ || +|+++--
T Consensus 2 ~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~idL 49 (223)
T 3u7i_A 2 NAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQINL 49 (223)
T ss_dssp -CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEET
T ss_pred CccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 56899988877654 233333333 4455554 68 8888754
No 258
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=42.42 E-value=14 Score=33.25 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+|||.|+-.|..|. .+|+.|.++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 36999998888874 689999999999999864
No 259
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=42.40 E-value=22 Score=32.30 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|||+++..+ ....++++++++||+|.++....
T Consensus 3 m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 3 VRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp SEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred eEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 699999877 56789999999999999987643
No 260
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=42.37 E-value=17 Score=30.82 Aligned_cols=33 Identities=15% Similarity=0.327 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+|||+|+-.|..| ..+|+.|.++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 35799999777666 5678999999999998864
No 261
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=42.11 E-value=1.2e+02 Score=27.32 Aligned_cols=107 Identities=12% Similarity=0.004 Sum_probs=56.7
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHHHh-cCCceeeeecChHhhhcccc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEAT-KERGCIAGWVPQEEVLAHSA 345 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~n~~~~~~vp~~~il~~~~ 345 (460)
.+.+|..|.+. ...+.++.+. +.+++.+... .++...+.. .-++. +-...+++..++
T Consensus 5 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~-----------~~~~~~~~~~~~~~~---~~~~~~~l~~~~ 63 (331)
T 4hkt_A 5 RFGLLGAGRIG-------KVHAKAVSGNADARLVAVADA-----------FPAAAEAIAGAYGCE---VRTIDAIEAAAD 63 (331)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECS-----------SHHHHHHHHHHTTCE---ECCHHHHHHCTT
T ss_pred EEEEECCCHHH-------HHHHHHHhhCCCcEEEEEECC-----------CHHHHHHHHHHhCCC---cCCHHHHhcCCC
Confidence 56678888765 3355566654 5555544421 122111100 11222 566788887444
Q ss_pred cccccccCC----hhHHHHHHHhCCceec-cccc--ccchhhHHHHHhhhceeeeec
Q 012587 346 VGGFLTHCG----WNSTLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 346 ~~~~I~HGG----~gs~~eal~~GvP~l~-~P~~--~DQ~~na~~~~e~~G~g~~~~ 395 (460)
+.+++.--- ..-+.+|+.+|+++++ -|.. .++..--..++++.|+-..+.
T Consensus 64 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 64 IDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 333543222 3467889999999886 3543 344333333335667766664
No 262
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=42.10 E-value=25 Score=29.17 Aligned_cols=40 Identities=13% Similarity=0.038 Sum_probs=21.9
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHh---CCCeEEEEe
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGH---AGIKITFLN 41 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~---rGH~Vt~~~ 41 (460)
|.+.++|||+++....+.+ .-+..|++.+.+ .|++|.++-
T Consensus 1 m~m~~~Mkilii~gS~r~~-g~t~~la~~i~~~l~~g~~v~~~d 43 (193)
T 1rtt_A 1 MSLSDDIKVLGISGSLRSG-SYNSAALQEAIGLVPPGMSIELAD 43 (193)
T ss_dssp ------CEEEEEESCCSTT-CHHHHHHHHHHTTCCTTCEEEECC
T ss_pred CCCCCCceEEEEECCCCCC-ChHHHHHHHHHHhccCCCeEEEEe
Confidence 4444567998888765522 345566666654 377777654
No 263
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=42.04 E-value=71 Score=24.55 Aligned_cols=48 Identities=10% Similarity=0.009 Sum_probs=32.7
Q ss_pred hCCceecccccccchhhHHHHHhhhc-eeeeecCCcchHHHHHHHHHHHhH
Q 012587 364 AGMPMICWPSFADQQINSRFVGEVWK-LGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~~~e~~G-~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
..+|++++-...|.......+ +.| +--.+.+.++.++|..+|+++++.
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~--~~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEAV--NEGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHHH--HHTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHHH--HcCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 467777775544443333333 457 645565889999999999999984
No 264
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=42.00 E-value=34 Score=30.84 Aligned_cols=42 Identities=21% Similarity=0.320 Sum_probs=29.7
Q ss_pred CCCCCCcEEEEEcCCCCC--CHH-HHHHHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVG--HVN-SMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~G--h~~-p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|.+.+|+|++++..|..| ... -.-.+...|.++|+++.+..+
T Consensus 3 m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t 47 (304)
T 3s40_A 3 MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHT 47 (304)
T ss_dssp --CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEEC
T ss_pred CccCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEc
Confidence 555678899888888554 332 334677888999999998865
No 265
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=41.93 E-value=25 Score=26.26 Aligned_cols=38 Identities=8% Similarity=0.009 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
.++|||+++|.++.+--.=.-++=++..++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 46789999999886444433344455555788888865
No 266
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=41.92 E-value=40 Score=30.69 Aligned_cols=41 Identities=15% Similarity=-0.015 Sum_probs=32.1
Q ss_pred HHHHHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
..+.+++++. +||+|+...... .+..+|.+||+|.++-++.
T Consensus 76 ~~La~li~~~--~pdlVL~g~ts~G~~laprlAa~L~~~~vtdv~~ 119 (315)
T 1efv_A 76 PLILATQKQF--NYTHICAGASAFGKNLLPRVAAKLEVAPISDIIA 119 (315)
T ss_dssp HHHHHHHHHH--CCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECE
T ss_pred HHHHHHHHhc--CCCEEEEcCCCCcchHHHHHHHHhCCCccccEEE
Confidence 4556667675 899999886544 5788899999999997765
No 267
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=41.82 E-value=44 Score=25.27 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=25.6
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|.+++++||+++- .+-.-.-.|.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~iLivd----d~~~~~~~l~~~l~~~g~~v~~~~~ 38 (140)
T 3grc_A 1 MSLAPRPRILICE----DDPDIARLLNLMLEKGGFDSDMVHS 38 (140)
T ss_dssp ----CCSEEEEEC----SCHHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCEEEEc----CCHHHHHHHHHHHHHCCCeEEEECC
Confidence 6677778999984 4555566788888889999866554
No 268
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=41.69 E-value=17 Score=32.40 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=25.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEc
Confidence 589998777766 3688999999999999875
No 269
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=41.50 E-value=1.8e+02 Score=25.39 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=25.4
Q ss_pred HHHHHHHcCCCCccEEEEcCCcc----hHHHHHHHhCCceEEEecc
Q 012587 100 LLKEMVSDSKSPVNCIITDGYMS----RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 100 ~l~~~~~~~~~~pD~vv~D~~~~----~~~~~A~~lgiP~v~~~~~ 141 (460)
.++.++.. ++|.||...... .....+...|||+|.+...
T Consensus 53 ~i~~l~~~---~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~ 95 (297)
T 3rot_A 53 FIESALAT---YPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTR 95 (297)
T ss_dssp HHHHHHHT---CCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCC
T ss_pred HHHHHHHc---CCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCC
Confidence 34455554 899988765433 2344466779999997654
No 270
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=41.48 E-value=21 Score=29.92 Aligned_cols=37 Identities=5% Similarity=-0.088 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCCCCH-HHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHV-NSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~-~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||||+++...-+.+- .-.-++++.+.+.|++|+++--
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~dL 38 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHEL 38 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEEH
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 678887776544332 2344567778888999888753
No 271
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=41.47 E-value=38 Score=29.71 Aligned_cols=36 Identities=11% Similarity=0.114 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|...|+++++.++.| ==.++|+.|.++|++|.+...
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 334578888887653 246889999999999988754
No 272
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=41.02 E-value=1.6e+02 Score=26.61 Aligned_cols=110 Identities=12% Similarity=0.037 Sum_probs=55.5
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccccc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 346 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~ 346 (460)
.+.+|..|.+. ...+.++.+. +.+++.+...+ . .....+.++. ++ ..-+-...+++..+++
T Consensus 7 ~igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~-------~-~~~~~~~~~~--~~-~~~~~~~~~ll~~~~~ 68 (330)
T 3e9m_A 7 RYGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRR-------L-ENAQKMAKEL--AI-PVAYGSYEELCKDETI 68 (330)
T ss_dssp EEEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSS-------S-HHHHHHHHHT--TC-CCCBSSHHHHHHCTTC
T ss_pred EEEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCC-------H-HHHHHHHHHc--CC-CceeCCHHHHhcCCCC
Confidence 57778888776 3455666664 44544444211 0 0011111111 11 0134456777774433
Q ss_pred ccccccCC----hhHHHHHHHhCCceec-cccc--ccchhhHHHHHhhhceeeeec
Q 012587 347 GGFLTHCG----WNSTLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 347 ~~~I~HGG----~gs~~eal~~GvP~l~-~P~~--~DQ~~na~~~~e~~G~g~~~~ 395 (460)
.+++---- ...+.+|+.+|+++++ -|.. .++..--..++++.|+-+.+.
T Consensus 69 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 69 DIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 33543333 2347889999999876 3543 344333333335667766554
No 273
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=40.71 E-value=25 Score=30.73 Aligned_cols=39 Identities=18% Similarity=0.247 Sum_probs=30.1
Q ss_pred CcEEEEE--cCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAIL--PLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~--~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|+|++.+ .-|+-|-..-...||..|+++|++|.++-...
T Consensus 1 M~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 1 MVRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp -CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3455443 34688999999999999999999999997643
No 274
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=40.69 E-value=46 Score=25.94 Aligned_cols=39 Identities=10% Similarity=0.073 Sum_probs=27.7
Q ss_pred CcEEEEEcC-CCCCCHHH--HHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPL-PAVGHVNS--MLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~-~~~Gh~~p--~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|.|++|+.. +-+|+... .+.+|.++...||+|.++...+
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 446765554 44565444 5777999999999999998744
No 275
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=40.57 E-value=15 Score=34.28 Aligned_cols=38 Identities=5% Similarity=0.073 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCCCCHH----HHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVN----SMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~----p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+|||+++..|...... -...++++|.++||+|..+..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 35799999876444433 336788999999999998874
No 276
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=40.24 E-value=83 Score=28.86 Aligned_cols=107 Identities=13% Similarity=0.013 Sum_probs=57.3
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHH---HHhcCCceeeeecChHhhhc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQEEVLA 342 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~n~~~~~~vp~~~il~ 342 (460)
-.+.+|..|.+. ...+.++... +.+++.+... .++... ++. ++. .+-...+++.
T Consensus 6 ~~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~-----------~~~~~~~~~~~~--g~~--~~~~~~~~l~ 63 (354)
T 3db2_A 6 VGVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSR-----------TEDKREKFGKRY--NCA--GDATMEALLA 63 (354)
T ss_dssp EEEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECS-----------SHHHHHHHHHHH--TCC--CCSSHHHHHH
T ss_pred ceEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECC-----------CHHHHHHHHHHc--CCC--CcCCHHHHhc
Confidence 357788888765 3456677765 5565555521 122111 111 222 2556678885
Q ss_pred ccccccccccCC----hhHHHHHHHhCCceec-cccc--ccchhhHHHHHhhhceeeeec
Q 012587 343 HSAVGGFLTHCG----WNSTLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 343 ~~~~~~~I~HGG----~gs~~eal~~GvP~l~-~P~~--~DQ~~na~~~~e~~G~g~~~~ 395 (460)
..++.+++.--- ...+.+|+.+|+++++ -|+. .++..--..++++.|+-+.+.
T Consensus 64 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 123 (354)
T 3db2_A 64 REDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCG 123 (354)
T ss_dssp CSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 433333442211 3567889999999876 3543 344433333435667766554
No 277
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=40.07 E-value=30 Score=29.18 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||||++.- +.|.+ -..|++.|.++||+|+.++.
T Consensus 4 m~~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~r 36 (227)
T 3dhn_A 4 VKKIVLIG--ASGFV--GSALLNEALNRGFEVTAVVR 36 (227)
T ss_dssp CCEEEEET--CCHHH--HHHHHHHHHTTTCEEEEECS
T ss_pred CCEEEEEc--CCchH--HHHHHHHHHHCCCEEEEEEc
Confidence 57877663 33333 35789999999999999876
No 278
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=39.96 E-value=17 Score=30.60 Aligned_cols=37 Identities=24% Similarity=0.191 Sum_probs=19.3
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHh---CCCeEE
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGH---AGIKIT 38 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~---rGH~Vt 38 (460)
|++|.+|||+++....+.. .-...|++.+.+ .|++|.
T Consensus 1 m~~M~~mkIl~I~GS~r~~-s~t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 1 MTTTSPLHFVTLLGSLRKA-SFNAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp ----CCEEEEEEECCCSTT-CHHHHHHHHHHHHCCTTEEEE
T ss_pred CCCCCCCEEEEEEcCCCCC-ChHHHHHHHHHHHccCCCEEE
Confidence 6777778998887764421 223344444443 477776
No 279
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=39.96 E-value=16 Score=31.14 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
++|||+|+-.|..| ..+++.|.+.||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 46799999655444 3578889999999998764
No 280
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=39.85 E-value=19 Score=33.13 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCCCCHH----HHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVN----SMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~----p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+++||+++..|..+-.. ....++++|.+.||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 35799999866444333 455789999999999999864
No 281
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=39.79 E-value=9.4 Score=19.62 Aligned_cols=18 Identities=22% Similarity=0.530 Sum_probs=15.3
Q ss_pred ChhHHHHHHHhCCceecc
Q 012587 354 GWNSTLESIVAGMPMICW 371 (460)
Q Consensus 354 G~gs~~eal~~GvP~l~~ 371 (460)
|.|++...|+.|.|.++-
T Consensus 1 giGa~LKVLa~~LP~liS 18 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALIS 18 (26)
T ss_pred CchHHHHHHHccchHHHH
Confidence 678899999999998764
No 282
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=39.75 E-value=1.5e+02 Score=23.90 Aligned_cols=139 Identities=9% Similarity=0.098 Sum_probs=75.5
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccccc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 346 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~ 346 (460)
++.|-|-+||.+ +....+.....++.+|.++-+.+- ..+.+|+.+.+... . .....+
T Consensus 3 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~--------SaHR~p~~~~~~~~----------~---a~~~g~ 59 (163)
T 3ors_A 3 AMKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVV--------SAHRTPKMMVQFAS----------E---ARERGI 59 (163)
T ss_dssp CCCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHHHHHH----------H---TTTTTC
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------CCcCCHHHHHHHHH----------H---HHhCCC
Confidence 355667777765 667788899999999988755542 12245654432110 0 011112
Q ss_pred ccccccCCh----hHHHHHHHhCCceecccccccch-hhHHHHH--h-hhceeeeec--C---CcchHHHHHHHHHHHhH
Q 012587 347 GGFLTHCGW----NSTLESIVAGMPMICWPSFADQQ-INSRFVG--E-VWKLGLDIK--D---LCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 347 ~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~-~na~~~~--e-~~G~g~~~~--~---~~~~~~l~~~i~~~l~~ 413 (460)
+++|.=+|. .++..++ .-+|++.+|...... .....+. . =-|+.+..- . ..++.-+...|..+- |
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~-d 137 (163)
T 3ors_A 60 NIIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQ-N 137 (163)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHHTT-C
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHhCC-C
Confidence 337765553 4555554 568999999754311 1111221 0 123322221 2 234444444443332 5
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 012587 414 RKEEFMESADRMANLAKKS 432 (460)
Q Consensus 414 ~~~~~~~~a~~l~~~~~~~ 432 (460)
+.++++.+.+++++++.
T Consensus 138 --~~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 138 --PSLVEKLNQYESSLIQK 154 (163)
T ss_dssp --THHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 88999999998888875
No 283
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=39.67 E-value=24 Score=34.21 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~ 42 (460)
++||||.|+-.|..| ..+|..|+++ ||+|+++..
T Consensus 3 ~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 3 FEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 346899999887777 4678888888 899998854
No 284
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=39.51 E-value=51 Score=31.56 Aligned_cols=31 Identities=13% Similarity=0.145 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.||+++.. | .-.+.+++++++.|++|.++.+
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~ 33 (451)
T 1ulz_A 3 NKVLVANR---G--EIAVRIIRACKELGIPTVAIYN 33 (451)
T ss_dssp SSEEECCC---H--HHHHHHHHHHHHHTCCEEEEEC
T ss_pred ceEEEECC---c--HHHHHHHHHHHHcCCeEEEEec
Confidence 47888753 2 3467899999999999998875
No 285
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=39.46 E-value=15 Score=35.91 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=28.0
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|.||+|.|+-.|..| .++|..|+++||+|+++..
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 467899999888766 4689999999999998864
No 286
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=39.46 E-value=21 Score=30.89 Aligned_cols=22 Identities=23% Similarity=0.280 Sum_probs=19.2
Q ss_pred HHHHHHHHHhCCCeEEEEeCcc
Q 012587 23 MLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 23 ~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
-.+||++|.++|++|++++.+.
T Consensus 32 G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 32 GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEeCCc
Confidence 4678999999999999999754
No 287
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=39.05 E-value=34 Score=31.61 Aligned_cols=34 Identities=18% Similarity=0.013 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|+||+++..+ .-...++++++++||+|.++....
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689998644 456788999999999999987643
No 288
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=38.92 E-value=20 Score=33.72 Aligned_cols=37 Identities=32% Similarity=0.474 Sum_probs=27.4
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|.+++..+|+|+-.|--| +.+|..|+++|++|+++=.
T Consensus 21 M~~~~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp --CCTTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEEC
T ss_pred ccccCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeC
Confidence 334445689988777444 7789999999999999864
No 289
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=38.81 E-value=1.2e+02 Score=24.72 Aligned_cols=114 Identities=12% Similarity=0.134 Sum_probs=63.4
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCC-chHHHHHhcCCceee---eecChHhhhc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQI-PEELLEATKERGCIA---GWVPQEEVLA 342 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~---~~vp~~~il~ 342 (460)
+.+++.-.||..... ...+++.+.+.|.++-+++... ...-+ +..+ +...+.++.. .|+++-.+-.
T Consensus 6 k~IllgvTGs~aa~k---~~~ll~~L~~~g~~V~vv~T~~------A~~fi~~~~l-~~l~~~v~~~~~~~~~~hi~l~~ 75 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN---ISHYIIELKSKFDEVNVIASTN------GRKFINGEIL-KQFCDNYYDEFEDPFLNHVDIAN 75 (175)
T ss_dssp CEEEEEECSSGGGGG---HHHHHHHHTTTCSEEEEEECTG------GGGGSCHHHH-HHHCSCEECTTTCTTCCHHHHHH
T ss_pred CEEEEEEeCHHHHHH---HHHHHHHHHHCCCEEEEEECcC------HHHHhhHHHH-HHhcCCEEecCCCCccccccccc
Confidence 456666666665432 3456677777788776665432 11112 2222 2333322211 3456666665
Q ss_pred ccccccccccCChhHHH-------------HHHHhCCceecccccc----c---chhhHHHHHhhhceee
Q 012587 343 HSAVGGFLTHCGWNSTL-------------ESIVAGMPMICWPSFA----D---QQINSRFVGEVWKLGL 392 (460)
Q Consensus 343 ~~~~~~~I~HGG~gs~~-------------eal~~GvP~l~~P~~~----D---Q~~na~~~~e~~G~g~ 392 (460)
.+++ .+|.=+-.||+. -++..++|++++|... . ...|-.++. ++|+-+
T Consensus 76 ~aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~-~~G~~i 143 (175)
T 3qjg_A 76 KHDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLK-DYGVSI 143 (175)
T ss_dssp TCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHH-HTTCEE
T ss_pred hhCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHH-HCCCEE
Confidence 6665 566656666543 3577899999999532 2 245777784 667643
No 290
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=38.77 E-value=33 Score=31.67 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=25.0
Q ss_pred CCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeC
Q 012587 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNT 42 (460)
Q Consensus 2 ~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~ 42 (460)
..|.||||++.- +.|-+= ..|+++|.++ ||+|+.++.
T Consensus 20 ~~m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r 57 (372)
T 3slg_A 20 GSMKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDM 57 (372)
T ss_dssp ---CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEES
T ss_pred cccCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeC
Confidence 346677877653 334332 5788999998 999999986
No 291
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=38.59 E-value=1.4e+02 Score=27.42 Aligned_cols=110 Identities=10% Similarity=-0.021 Sum_probs=57.5
Q ss_pred cEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCc-eeeeecChHhhhcccc
Q 012587 268 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERG-CIAGWVPQEEVLAHSA 345 (460)
Q Consensus 268 ~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~-~~~~~vp~~~il~~~~ 345 (460)
.+.+|..|.+.. ...+.++.+. +.+++.+... .++. .+...+.. ...-+-...++|..++
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~-----------~~~~-~~~~a~~~~~~~~~~~~~~ll~~~~ 68 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDS-----------DLER-ARRVHRFISDIPVLDNVPAMLNQVP 68 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECS-----------SHHH-HGGGGGTSCSCCEESSHHHHHHHSC
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcC-----------CHHH-HHHHHHhcCCCcccCCHHHHhcCCC
Confidence 567788887641 1255666655 4555555521 1111 11111221 1123445788888765
Q ss_pred cccccccCChh----HHHHHHHhCCceec-ccccc--cchhhHHHHHhhhceeeeec
Q 012587 346 VGGFLTHCGWN----STLESIVAGMPMIC-WPSFA--DQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 346 ~~~~I~HGG~g----s~~eal~~GvP~l~-~P~~~--DQ~~na~~~~e~~G~g~~~~ 395 (460)
+.+++-.--.. -+.+|+.+|+++++ -|... ++..-...++++.|+-+.+.
T Consensus 69 vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 125 (359)
T 3m2t_A 69 LDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVG 125 (359)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 54565544433 36788999999876 35533 34333333335567655553
No 292
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=38.52 E-value=28 Score=30.50 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=30.6
Q ss_pred CCcEEEEEcC--CCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 5 DHVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 5 ~~~~il~~~~--~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+++||+.+.. |+-|-..-...||..|+ +|++|.++-...
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 3456655544 58888899999999999 999999997644
No 293
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=38.37 E-value=18 Score=33.14 Aligned_cols=31 Identities=16% Similarity=0.263 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||.|+-.|..| .++|..|.+.||+|+++..
T Consensus 15 ~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 15 MRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 699999888877 5788999999999999875
No 294
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=38.17 E-value=16 Score=33.09 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.++||.|+-.|..|. ++|+.|.++||+|+++..
T Consensus 8 ~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 357999997776664 689999999999998753
No 295
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=38.06 E-value=17 Score=33.00 Aligned_cols=39 Identities=15% Similarity=0.111 Sum_probs=29.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc-chhHHhh
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH-YYDRVIR 51 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~-~~~~~~~ 51 (460)
|||+|+-.|+.|- .+|..|. +||+|+++.... ..+.+.+
T Consensus 3 mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~ 42 (307)
T 3ego_A 3 LKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQS 42 (307)
T ss_dssp CEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHh
Confidence 6999998888775 5688888 999999998643 2345544
No 296
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=37.92 E-value=26 Score=29.60 Aligned_cols=37 Identities=5% Similarity=0.044 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCCCC---HHHHH-HHHHHHHhC--CCeEEEEeC
Q 012587 6 HVHVAILPLPAVGH---VNSML-NLAELLGHA--GIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh---~~p~l-~La~~L~~r--GH~Vt~~~~ 42 (460)
||||+++...-+++ -.-+. .+++.|.++ ||+|.++--
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 67998888776654 22222 456666666 999998764
No 297
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=37.88 E-value=71 Score=25.06 Aligned_cols=97 Identities=13% Similarity=0.191 Sum_probs=58.5
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChHHH
Q 012587 10 AILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPEL 89 (460)
Q Consensus 10 l~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (460)
+|++... .+-.-++.+++.|.+.|+++. ++....+.+.+ .| +....+... .++. .
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i~--AT~GTa~~L~~-~G-----------i~v~~v~k~-~egg-----~---- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKLF--ATEATSDWLNA-NN-----------VPATPVAWP-SQEG-----Q---- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEEE--EEHHHHHHHHH-TT-----------CCCEEECCG-GGC-----------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEEE--ECchHHHHHHH-cC-----------CeEEEEEec-cCCC-----c----
Confidence 4444443 456778999999999999743 34466677755 33 443333221 1110 0
Q ss_pred HHHHHhhCcHHHHHHHHcCCCCccEEEEcCCc--------chHHHHHHHhCCceEEE
Q 012587 90 VDSLNCATPPLLKEMVSDSKSPVNCIITDGYM--------SRAIDAAREVGVSIIYF 138 (460)
Q Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~--------~~~~~~A~~lgiP~v~~ 138 (460)
....+++.+++++= +.|+||.-.-. ...+-.|-.+|||+++.
T Consensus 82 -----~~~~~~i~d~i~~g--~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 -----NPSLSSIRKLIRDG--SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp --------CBCHHHHHHTT--SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred -----ccccccHHHHHHCC--CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 00114567777774 99999974432 14567788999999983
No 298
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=37.82 E-value=77 Score=30.77 Aligned_cols=96 Identities=13% Similarity=0.155 Sum_probs=55.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecC--CCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT--DGLPRDHPRTPD 84 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 84 (460)
.++++.. .|=.-++.+|+.|.+.|.++. ++...++.+.+. | +.+..+. .++|+......+
T Consensus 11 ~~aLISV----sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~-G-----------I~v~~V~~vTgfPEil~GRVK 72 (523)
T 3zzm_A 11 RRALISV----YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT-G-----------IPVTPVEQLTGFPEVLDGRVK 72 (523)
T ss_dssp CEEEEEE----SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT-T-----------CCCEEHHHHHSCCCCTTTTSS
T ss_pred cEEEEEE----eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc-C-----------CceeeccccCCCchhhCCccc
Confidence 3555554 345568899999999998875 455677777664 3 5544444 356665444444
Q ss_pred ChH-HHHHHHHhh--CcHHHHHHHHcCC-CCccEEEEcCCc
Q 012587 85 KFP-ELVDSLNCA--TPPLLKEMVSDSK-SPVNCIITDGYM 121 (460)
Q Consensus 85 ~~~-~~~~~~~~~--~~~~l~~~~~~~~-~~pD~vv~D~~~ 121 (460)
++- ....-+... ..+.+.+ +++.+ ...|+||++.+-
T Consensus 73 TLHP~ihgGiLa~r~~~~h~~~-l~~~~i~~iDlVvvNLYP 112 (523)
T 3zzm_A 73 TLHPRVHAGLLADLRKSEHAAA-LEQLGIEAFELVVVNLYP 112 (523)
T ss_dssp SCSHHHHHHHHCCTTSHHHHHH-HHHHTCCCCSEEEEECCC
T ss_pred cCCchhhhhhccCCCCHHHHHH-HHHCCCCceeEEEEeCCC
Confidence 443 233333331 2233333 33332 588999999654
No 299
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=37.74 E-value=37 Score=33.80 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=40.5
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
..||++.+.++..|-....-++..|..+|++|..++..-..+.+.+.
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~a 144 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRT 144 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 56999999999999999999999999999999999875555555444
No 300
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=37.68 E-value=45 Score=27.77 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCCCCH----HHHHHHHHHHHhCCCeEEEEeCc
Q 012587 4 QDHVHVAILPLPAVGHV----NSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~----~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
..+++|.+++... +.- .-...|++.|+++|+.|..-+.+
T Consensus 11 ~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 11 PGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp --CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 3457999998766 443 33567888899999988776543
No 301
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=37.54 E-value=54 Score=27.91 Aligned_cols=39 Identities=10% Similarity=0.185 Sum_probs=28.7
Q ss_pred CCCcEEEEEcCCCCCCHH----HHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVN----SMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~----p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+|.+|.++|....+.-. -...|++.|+++|+.|..-+.
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg 53 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGG 53 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 445579999887766433 356788999999999877655
No 302
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=37.47 E-value=1.1e+02 Score=25.23 Aligned_cols=71 Identities=17% Similarity=0.110 Sum_probs=42.7
Q ss_pred cchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHH-----HHHHHHHHHHHHHHH----HhhcCCChHHHHHHH
Q 012587 376 DQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKE-----EFMESADRMANLAKK----SVNKGGSSYCNLDRL 446 (460)
Q Consensus 376 DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~-----~~~~~a~~l~~~~~~----~~~~~g~~~~~~~~~ 446 (460)
+..+.+..- +..|||+.+ |+++|.++|.+.++.... .|+ +.-.+-..+|+ -++++......++.-
T Consensus 100 ~~id~~~Fe-~~cGVGV~V----T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~ 173 (187)
T 3tl4_X 100 EASTKMGMN-ENSGVGIEI----TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQE 173 (187)
T ss_dssp GGCCHHHHH-HTTTTTCCC----CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHH
T ss_pred CCCCHHHHH-HHCCCCeEe----CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHH
Confidence 444555555 578999999 899999999999863112 234 45455555543 233444444555555
Q ss_pred HHHHHh
Q 012587 447 VNDIKM 452 (460)
Q Consensus 447 ~~~l~~ 452 (460)
+-.|.+
T Consensus 174 ~l~lLG 179 (187)
T 3tl4_X 174 VLKLLG 179 (187)
T ss_dssp HHHHHC
T ss_pred HHHHcC
Confidence 544443
No 303
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=37.45 E-value=22 Score=33.13 Aligned_cols=38 Identities=13% Similarity=0.215 Sum_probs=31.0
Q ss_pred CCcEEEEEcCCCCCCHHHHH----HHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSML----NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l----~La~~L~~rGH~Vt~~~~ 42 (460)
+++||+++..|-.+--.-++ .+.++|.+.||+|+.+..
T Consensus 2 ~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i 43 (364)
T 3i12_A 2 AKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGI 43 (364)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEE
Confidence 46799999998766655555 788999999999999885
No 304
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=37.37 E-value=1.2e+02 Score=26.23 Aligned_cols=36 Identities=11% Similarity=0.139 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCCH-HHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHV-NSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~-~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||+++..-+.-++ ..+...++.+..-|.+|.+++.
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~ 38 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCP 38 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECC
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 58887777665555 4555677777766777777765
No 305
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=37.27 E-value=21 Score=32.42 Aligned_cols=33 Identities=12% Similarity=0.195 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||+|++.- +-|-+ -..|++.|.++||+|+.+..
T Consensus 1 M~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 1 MNSILICG--GAGYI--GSHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp -CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEC--CCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 46776652 22322 35789999999999999874
No 306
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=37.08 E-value=36 Score=30.28 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=32.1
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|..|+|..-|+-|--.-...||..|+++|++|.++-..
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 44567766689999999999999999999999998653
No 307
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=36.72 E-value=11 Score=32.11 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||+++-.|.. -..+++.|.++||+|+++..
T Consensus 1 M~iiIiG~G~~-----G~~la~~L~~~g~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETT-----AYYLARSMLSRKYGVVIINK 31 (218)
T ss_dssp CCEEEECCHHH-----HHHHHHHHHHTTCCEEEEES
T ss_pred CEEEEECCCHH-----HHHHHHHHHhCCCeEEEEEC
Confidence 57888765432 45789999999999999975
No 308
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=36.69 E-value=61 Score=27.75 Aligned_cols=42 Identities=5% Similarity=0.110 Sum_probs=28.9
Q ss_pred CCCCCCcEEEEEcC-----CCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 1 MEKQDHVHVAILPL-----PAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 1 ~~~~~~~~il~~~~-----~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|.-..|+||+|+.. ++. ...=+....+.|.+.|++|++++..
T Consensus 1 ~~~~~m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~ 47 (232)
T 1vhq_A 1 MSLITMKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPD 47 (232)
T ss_dssp -----CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CccccCCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecC
Confidence 33345679999988 432 4455666778899999999999863
No 309
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=36.59 E-value=20 Score=32.63 Aligned_cols=32 Identities=13% Similarity=0.203 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCC-CeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rG-H~Vt~~~~ 42 (460)
+|||.|+-.|..| .++|+.|.++| |+|+++..
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeC
Confidence 4699999888777 67899999999 99998865
No 310
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=36.53 E-value=36 Score=26.37 Aligned_cols=47 Identities=6% Similarity=0.036 Sum_probs=35.5
Q ss_pred hCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 364 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
..+|++++-...+.. ...+.. +.|+--.+.|.++.++|.+.|+++++
T Consensus 86 ~~ipvI~lTa~~~~~-~~~~~~-~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKRE-QIIEAA-QAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHH-HHHHHH-HTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHH-HHHHHH-HCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 468888886555444 444452 57988888899999999999999875
No 311
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=36.52 E-value=40 Score=30.27 Aligned_cols=38 Identities=13% Similarity=0.200 Sum_probs=31.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
+..|+|..-|+-|-..-...||..|+++|++|.++-..
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 44556665678899999999999999999999999763
No 312
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=36.40 E-value=48 Score=30.82 Aligned_cols=33 Identities=9% Similarity=0.012 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|+||+++..+ .....++++|++.||+|.++.+.
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~ 33 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPT 33 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589998764 34567888999999999998863
No 313
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=36.40 E-value=47 Score=27.29 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=23.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+|++. |+.|-+ -..|+++|.++||+|+.++.
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEe
Confidence 577665 333432 35788999999999999886
No 314
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=36.38 E-value=74 Score=28.46 Aligned_cols=108 Identities=17% Similarity=0.158 Sum_probs=60.2
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR 81 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (460)
.+++||+++..+. || -+-+|..+-.+. ..+|..+.+..... +.+.+. ..++.+..+|...
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~A~--------~~gIp~~~~~~~~------ 147 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSVSL--------VGDIPFHYLPVTP------ 147 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCCCC--------CTTSCEEECCCCG------
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHHHH--------HcCCCEEEEeccC------
Confidence 3578999998887 54 333444444332 35777666533211 222111 2246666665210
Q ss_pred CCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 82 TPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.-. ....+.+.+.+++. +||+||.-.+.. ....+-+.+.-.++-++++
T Consensus 148 ---~~r-------~~~~~~~~~~l~~~--~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 148 ---ATK-------AAQESQIKNIVTQS--QADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ---GGH-------HHHHHHHHHHHHHH--TCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ---cch-------hhHHHHHHHHHHHh--CCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 000 01124556777777 999999876643 4555666676777777665
No 315
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=36.37 E-value=60 Score=25.42 Aligned_cols=38 Identities=21% Similarity=0.317 Sum_probs=27.0
Q ss_pred cEEEEEcC-CCCCCHHH--HHHHHHHHHhCCCeE-EEEeCcc
Q 012587 7 VHVAILPL-PAVGHVNS--MLNLAELLGHAGIKI-TFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~-~~~Gh~~p--~l~La~~L~~rGH~V-t~~~~~~ 44 (460)
||++|+.. |-+|.-.. .+.+|+++.+.||+| .++-..+
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~D 54 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 54 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEech
Confidence 57755544 45665544 567799999999999 8887633
No 316
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=36.17 E-value=38 Score=28.02 Aligned_cols=37 Identities=14% Similarity=0.096 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCC---CCHHHHH-HHHHHHHhCC--CeEEEEeC
Q 012587 6 HVHVAILPLPAV---GHVNSML-NLAELLGHAG--IKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~---Gh~~p~l-~La~~L~~rG--H~Vt~~~~ 42 (460)
||||+++....+ |...-+. .+++.|.++| ++|.++--
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 579988877655 5555544 3566677776 89888764
No 317
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=36.17 E-value=1.9e+02 Score=24.15 Aligned_cols=52 Identities=13% Similarity=0.037 Sum_probs=37.4
Q ss_pred HHHhCCceecccc----cccchhhHHHHHhhhceeeeecC------------CcchHHHHHHHHHHHhH
Q 012587 361 SIVAGMPMICWPS----FADQQINSRFVGEVWKLGLDIKD------------LCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 361 al~~GvP~l~~P~----~~DQ~~na~~~~e~~G~g~~~~~------------~~~~~~l~~~i~~~l~~ 413 (460)
++..++|+|++|. ....+.|-.++. ++|+=+..+. ..+.+.|.+.+.+.|+.
T Consensus 119 ~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~-~~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 119 TLRNGKPVVVGISTNDALGLNGINIMRLM-ATKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp HHHTTCCEEEEEEETTTTTTTHHHHHHHH-TSTTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred HhhcCCCEEEEECCChhHHHhHHHHHHHH-HCCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 3667999999996 356778999994 7786554431 23447788888888873
No 318
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=36.00 E-value=18 Score=33.10 Aligned_cols=31 Identities=29% Similarity=0.308 Sum_probs=25.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 589998777766 3568899999999999875
No 319
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=35.63 E-value=94 Score=27.89 Aligned_cols=83 Identities=8% Similarity=0.017 Sum_probs=49.7
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccccc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 346 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~ 346 (460)
+-.|+++.-|........+..+...++..+..+.+..... +....+.. ..+....++
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~-----------~~~a~~~~------------~~~~~~~d~ 66 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE-----------QGDATKYC------------QEFASKVDL 66 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS-----------TTHHHHHH------------HHHTTTCSE
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC-----------cchHHHHH------------HHhhcCCCE
Confidence 4456666654433334566778888888887776554311 11111100 001123454
Q ss_pred ccccccCChhHHHHHHH------hCCceeccccc
Q 012587 347 GGFLTHCGWNSTLESIV------AGMPMICWPSF 374 (460)
Q Consensus 347 ~~~I~HGG~gs~~eal~------~GvP~l~~P~~ 374 (460)
+|.-||=||+.|++. .++|+.++|..
T Consensus 67 --vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 --IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp --EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred --EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999999999874 57899999973
No 320
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=35.52 E-value=19 Score=31.92 Aligned_cols=33 Identities=15% Similarity=0.080 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
||||++.- + |.+= ..|++.|.++||+|+.++..
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 46777773 5 6443 46789999999999999863
No 321
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=35.31 E-value=50 Score=24.93 Aligned_cols=38 Identities=16% Similarity=0.251 Sum_probs=0.0
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|.+++++||+++ ..|-.-.-.|.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~iliv----dd~~~~~~~l~~~L~~~g~~v~~~~~ 38 (136)
T 3kto_A 1 MSLNHHPIIYLV----DHQKDARAALSKLLSPLDVTIQCFAS 38 (136)
T ss_dssp ------CEEEEE----CSCHHHHHHHHHHHTTSSSEEEEESS
T ss_pred CCCCCCCeEEEE----cCCHHHHHHHHHHHHHCCcEEEEeCC
No 322
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=35.24 E-value=15 Score=35.89 Aligned_cols=30 Identities=30% Similarity=0.297 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFL 40 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~ 40 (460)
|+||+|+-.|--| |.-|..|+++||+|+++
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~Vl 30 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLL 30 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEE
Confidence 5688888666433 77788999999999997
No 323
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=35.23 E-value=25 Score=33.10 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=31.1
Q ss_pred CCCcEEEEEcCCCCCCHHHHH----HHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSML----NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l----~La~~L~~rGH~Vt~~~~ 42 (460)
|+++||+++..|..+--.-++ .++++|.+.||+|+.+..
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i 62 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGI 62 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEE
Confidence 566899999998666655555 788899999999999885
No 324
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=35.21 E-value=80 Score=25.83 Aligned_cols=40 Identities=18% Similarity=0.155 Sum_probs=30.7
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
+++++||+|+.+++.. ..-+....+.|.+.|++|.+++..
T Consensus 6 ~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 6 DLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 3566899999886543 445666788899999999999863
No 325
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=35.09 E-value=47 Score=29.60 Aligned_cols=37 Identities=16% Similarity=0.043 Sum_probs=27.6
Q ss_pred cEEEEEcCCCC-CCHH---HHHHHHHHHHhCCCeEEEEeCc
Q 012587 7 VHVAILPLPAV-GHVN---SMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 7 ~~il~~~~~~~-Gh~~---p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 58999886643 2322 3457999999999999998764
No 326
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=35.08 E-value=65 Score=27.01 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=29.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|.||+|+..++.- ..-+....+.|.+.|++|++++..
T Consensus 9 ~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 9 SKRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4599999887643 555666778999999999999973
No 327
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=35.07 E-value=72 Score=28.56 Aligned_cols=106 Identities=9% Similarity=0.102 Sum_probs=59.3
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCcc--chhHHhhccccccccccCCCCceEEecCCCCCCCC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEH--YYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (460)
.+++||+++..+. || -+-+|..+-.+- ..+|..+.+.. .....++. .++.+..+|... .
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~-----------~gIp~~~~~~~~--~- 149 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDF-----------GDIPFYHFPVNK--D- 149 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTT-----------TTCCEEECCCCT--T-
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHH-----------cCCCEEEeCCCc--c-
Confidence 3578999998887 55 233444443332 24666665422 22222222 247777665311 0
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
+ . ....+.+.+.+++. +||+||.-.+.. ....+-+.+.-.++-++++
T Consensus 150 -----~-r-------~~~~~~~~~~l~~~--~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 150 -----T-R-------RQQEAAITALIAQT--HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp -----T-H-------HHHHHHHHHHHHHH--TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -----c-H-------HHHHHHHHHHHHhc--CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 0 1 01124556777777 999999876643 4555566666677777665
No 328
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=34.93 E-value=35 Score=30.94 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=29.2
Q ss_pred CcEEEEEcCCCCCCHHH-HHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNS-MLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p-~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+||+++..+..++... .-.+.+.|.++|++|.+...
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 56999999998887655 56788999999999887644
No 329
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=34.72 E-value=40 Score=29.12 Aligned_cols=37 Identities=11% Similarity=0.147 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCC--CCHHHHHH-HHHHHHhC-CCeEEEEeC
Q 012587 6 HVHVAILPLPAV--GHVNSMLN-LAELLGHA-GIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~--Gh~~p~l~-La~~L~~r-GH~Vt~~~~ 42 (460)
||||+++....+ |+..-+.. +++.|.++ |++|.++.-
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl 41 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTP 41 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 579988877654 66555543 46667777 999988753
No 330
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=34.60 E-value=11 Score=36.60 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+.|||+++-.|-.| ..||+.|.+.||+|+++-.
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~ 34 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDK 34 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEES
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEEC
Confidence 35799999887665 4689999999999999964
No 331
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=34.48 E-value=1.2e+02 Score=27.75 Aligned_cols=111 Identities=14% Similarity=-0.094 Sum_probs=56.8
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 345 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~ 345 (460)
-.+.+|..|.+.. ...+.++... +.+++.+... .++... ...+..-+..+-...+++..++
T Consensus 28 ~rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~-----------~~~~~~-~~a~~~g~~~~~~~~~ll~~~~ 89 (350)
T 3rc1_A 28 IRVGVIGCADIAW------RRALPALEAEPLTEVTAIASR-----------RWDRAK-RFTERFGGEPVEGYPALLERDD 89 (350)
T ss_dssp EEEEEESCCHHHH------HTHHHHHHHCTTEEEEEEEES-----------SHHHHH-HHHHHHCSEEEESHHHHHTCTT
T ss_pred eEEEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcC-----------CHHHHH-HHHHHcCCCCcCCHHHHhcCCC
Confidence 3677888887652 1355666655 4555544421 112111 1111111223456678887544
Q ss_pred cccccccCC----hhHHHHHHHhCCceec-cccc--ccchhhHHHHHhhhceeeeec
Q 012587 346 VGGFLTHCG----WNSTLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 346 ~~~~I~HGG----~gs~~eal~~GvP~l~-~P~~--~DQ~~na~~~~e~~G~g~~~~ 395 (460)
+.+++---- ...+.+|+.+|+++++ -|+. .++..--..++++.|+-+.+.
T Consensus 90 ~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 90 VDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMEN 146 (350)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 433443221 3467789999999776 3654 344433333435667655554
No 332
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=34.39 E-value=38 Score=29.34 Aligned_cols=35 Identities=0% Similarity=-0.111 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.|.|+++++.++.| =-.+|++.|.++|++|.++..
T Consensus 20 ~m~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 54 (251)
T 3orf_A 20 HMSKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDF 54 (251)
T ss_dssp --CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 45688888877643 246889999999999988875
No 333
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=34.15 E-value=51 Score=25.70 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEe
Q 012587 6 HVHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLN 41 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l-~La~~L~~rGH~Vt~~~ 41 (460)
||||+++-....|+..-+. .|++.|.++|++|..+.
T Consensus 1 M~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 1 MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CCSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 5688887777778887755 67888999999998764
No 334
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=34.13 E-value=45 Score=26.91 Aligned_cols=39 Identities=18% Similarity=-0.005 Sum_probs=25.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|.||||++++.-...=-+-.+.+++..++.+.+|.++.+
T Consensus 2 ~~mm~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~ 40 (162)
T 4f3r_A 2 NAMKPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACA 40 (162)
T ss_dssp ---CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEEC
T ss_pred CCceEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEe
Confidence 567899988875443334456777888888888877665
No 335
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=33.99 E-value=18 Score=28.19 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=0.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEE
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFL 40 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~ 40 (460)
..||+++-+|..|. .+++.|.++||+|+++
T Consensus 7 ~~~viIiG~G~~G~-----~la~~L~~~g~~v~vi 36 (140)
T 3fwz_A 7 CNHALLVGYGRVGS-----LLGEKLLASDIPLVVI 36 (140)
T ss_dssp CSCEEEECCSHHHH-----HHHHHHHHTTCCEEEE
T ss_pred CCCEEEECcCHHHH-----HHHHHHHHCCCCEEEE
No 336
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=33.87 E-value=36 Score=29.17 Aligned_cols=39 Identities=15% Similarity=0.020 Sum_probs=31.2
Q ss_pred CcEEEEEc--CCCCCCHHHHHHHHHHHHhC-CCeEEEEeCcc
Q 012587 6 HVHVAILP--LPAVGHVNSMLNLAELLGHA-GIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~--~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~ 44 (460)
++||+.+. -|+-|--.-...||..|+++ |++|.++-...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 45554443 36889999999999999999 99999997643
No 337
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=33.84 E-value=2.4e+02 Score=24.57 Aligned_cols=36 Identities=0% Similarity=0.005 Sum_probs=23.5
Q ss_pred CcEEEEEcCCCCCCHHHH--HHHHHHHHhCCCeEEEEe
Q 012587 6 HVHVAILPLPAVGHVNSM--LNLAELLGHAGIKITFLN 41 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~--l~La~~L~~rGH~Vt~~~ 41 (460)
..+|+++.......++.. -.+-+++.++|+++.++.
T Consensus 4 ~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 41 (305)
T 3g1w_A 4 NETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRG 41 (305)
T ss_dssp -CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 347877776655544432 356677777899998854
No 338
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=33.69 E-value=1.8e+02 Score=24.50 Aligned_cols=44 Identities=14% Similarity=0.037 Sum_probs=34.0
Q ss_pred EEEEEcCCCCCCHHHHHHHHHH-HHhCCCeEEEEeCccchhHHhh
Q 012587 8 HVAILPLPAVGHVNSMLNLAEL-LGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~-L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
-+++...|+.|--.-.+.++.. +.+.|..|.|++.+...+.+.+
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~ 76 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRR 76 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHH
Confidence 4677778899999999998765 5566899999998776665543
No 339
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=33.65 E-value=71 Score=27.03 Aligned_cols=39 Identities=5% Similarity=-0.006 Sum_probs=28.3
Q ss_pred CC-cEEEEEcCC---------CCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 5 DH-VHVAILPLP---------AVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 5 ~~-~~il~~~~~---------~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
+| +||+|+... ..-...=+....+.|.+.|++|++++..
T Consensus 3 ~m~~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~ 51 (224)
T 1u9c_A 3 AMSKRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQ 51 (224)
T ss_dssp -CCCEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCC
Confidence 45 589888873 2234456777788899999999999963
No 340
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=33.38 E-value=23 Score=31.42 Aligned_cols=31 Identities=26% Similarity=0.253 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||||+|+-.|..|. .+++.|.+ ||+|+++..
T Consensus 1 M~~i~iiG~G~~G~-----~~a~~l~~-g~~V~~~~~ 31 (289)
T 2cvz_A 1 MEKVAFIGLGAMGY-----PMAGHLAR-RFPTLVWNR 31 (289)
T ss_dssp -CCEEEECCSTTHH-----HHHHHHHT-TSCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHhC-CCeEEEEeC
Confidence 57999998888875 46888999 999988764
No 341
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=33.28 E-value=43 Score=29.91 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|++|++.- +.|.+ -..|+++|.++||+|+.++..
T Consensus 4 ~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVG--GTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEES--TTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEc--CCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 56777663 33433 246789999999999998864
No 342
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=33.07 E-value=26 Score=31.32 Aligned_cols=31 Identities=16% Similarity=0.110 Sum_probs=25.7
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+|+++-.|.-| +..|..|+++|++|+++-.
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEec
Confidence 588888777655 7789999999999999975
No 343
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=33.04 E-value=1.3e+02 Score=22.11 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=21.3
Q ss_pred cchHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHhhcCC
Q 012587 398 CDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGG 437 (460)
Q Consensus 398 ~~~~~l~~~i~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g 437 (460)
++++.+.+....+ ...+.+++-|.+.+.+ ..+|+
T Consensus 3 ~~~eq~~k~~~el-----~~v~~n~~lL~EML~~-~~p~~ 36 (103)
T 1wrd_A 3 LGSEQIGKLRSEL-----EMVSGNVRVMSEMLTE-LVPTQ 36 (103)
T ss_dssp SSSTTHHHHHHHH-----HHHHHHHHHHHHHHHH-SCTTT
T ss_pred CCHHHHHHHHHHH-----HHHHHHHHHHHHHHHh-cCCCC
Confidence 4566666655555 5577777777777766 34443
No 344
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=32.91 E-value=59 Score=32.99 Aligned_cols=40 Identities=10% Similarity=0.000 Sum_probs=26.3
Q ss_pred HHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEecc
Q 012587 100 LLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 100 ~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (460)
.+.+.++++ +||+||.-.+.. ....+-+.....++-++++
T Consensus 66 ~~~~~l~~~--~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 66 LWVERIAQL--SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHHHH--CCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHHhc--CCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 345566676 999999876533 3444455556667887776
No 345
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=32.76 E-value=2.1e+02 Score=24.42 Aligned_cols=31 Identities=10% Similarity=0.336 Sum_probs=21.0
Q ss_pred CccEEEEcCCcchHHH-HHHHhCCceEEEecc
Q 012587 111 PVNCIITDGYMSRAID-AAREVGVSIIYFRTI 141 (460)
Q Consensus 111 ~pD~vv~D~~~~~~~~-~A~~lgiP~v~~~~~ 141 (460)
++|.||.......... .+...|+|+|.+...
T Consensus 64 ~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~~~ 95 (277)
T 3e61_A 64 NCTGMISTAFNENIIENTLTDHHIPFVFIDRI 95 (277)
T ss_dssp TCSEEEECGGGHHHHHHHHHHC-CCEEEGGGC
T ss_pred CCCEEEEecCChHHHHHHHHcCCCCEEEEecc
Confidence 8999998764334444 566779999986543
No 346
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=32.71 E-value=43 Score=27.95 Aligned_cols=37 Identities=8% Similarity=0.110 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCC----CCHHHHH-HHHHHHHhCC--CeEEEEeC
Q 012587 6 HVHVAILPLPAV----GHVNSML-NLAELLGHAG--IKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~----Gh~~p~l-~La~~L~~rG--H~Vt~~~~ 42 (460)
||||+++...-+ |+..-+. .+++.|.++| |+|.++--
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 578887776554 5444443 3566777777 99988754
No 347
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=32.53 E-value=47 Score=32.53 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=32.6
Q ss_pred CcEEEEEcCC---CCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 6 HVHVAILPLP---AVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 6 ~~~il~~~~~---~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|+|.+|++.| +.|-=.-.-+|+.-|+.||++||..=-++
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dp 43 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDP 43 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCc
Confidence 3699999986 66777788899999999999999986533
No 348
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=32.39 E-value=12 Score=33.73 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=27.2
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|||+|+-.|+.|- .+|..|.++||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 6999998888774 5788899999999999863
No 349
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=32.38 E-value=42 Score=25.40 Aligned_cols=38 Identities=16% Similarity=0.001 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCCCH--HHHHHHHHHHHhCC--CeEEEEeCcc
Q 012587 7 VHVAILPLPAVGHV--NSMLNLAELLGHAG--IKITFLNTEH 44 (460)
Q Consensus 7 ~~il~~~~~~~Gh~--~p~l~La~~L~~rG--H~Vt~~~~~~ 44 (460)
+|++|+.....-.. +..+..|...+++| |+|.++.-.+
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 68877766633222 33567799999999 8999998744
No 350
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=32.21 E-value=26 Score=30.65 Aligned_cols=33 Identities=6% Similarity=0.181 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+||||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMAS-----AIIKGLKQTPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHTTSSCEEEEECS
T ss_pred CccEEEEECCCHHHH-----HHHHHHHhCCCeEEEECC
Confidence 468999997776653 578889999999987754
No 351
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=32.17 E-value=50 Score=29.17 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=32.4
Q ss_pred HHHHHHHHcCCCCccEEEEcCCcc------hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSDSKSPVNCIITDGYMS------RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~~~~~pD~vv~D~~~~------~~~~~A~~lgiP~v~~~~~ 141 (460)
..+.+++++. +||+|++..... .+..+|+.||+|.++..+.
T Consensus 102 ~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 4556667665 899999886653 6899999999999997654
No 352
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=32.16 E-value=1.6e+02 Score=32.08 Aligned_cols=35 Identities=6% Similarity=0.046 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY 45 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (460)
+.||+++.. |. -.+.+++++++.|+++..+.+...
T Consensus 4 ~kkVLIagr---Ge--ia~riiraa~elGi~vVav~s~~d 38 (1150)
T 3hbl_A 4 IKKLLVANR---GE--IAIRIFRAAAELDISTVAIYSNED 38 (1150)
T ss_dssp CCEEEECCC---HH--HHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CCEEEEECC---CH--HHHHHHHHHHHCCCEEEEEEcCCc
Confidence 347777543 22 457899999999999999876443
No 353
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=32.08 E-value=30 Score=28.98 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=23.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|||++.- +-|.+ =..|+++|.++||+|+.++..
T Consensus 1 MkvlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG--ATGRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEc--CCchh--HHHHHHHHHhCCCEEEEEEcC
Confidence 4765543 33433 257899999999999999863
No 354
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=32.04 E-value=48 Score=28.72 Aligned_cols=33 Identities=6% Similarity=-0.124 Sum_probs=26.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.|+++++.++.| -=.++|+.|.++|++|.++..
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 477888877654 346899999999999998875
No 355
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=32.03 E-value=26 Score=27.36 Aligned_cols=57 Identities=14% Similarity=0.002 Sum_probs=36.1
Q ss_pred hCCceecccccccchhhHHHHHhhhc-eeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHH
Q 012587 364 AGMPMICWPSFADQQINSRFVGEVWK-LGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADR 424 (460)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~~~e~~G-~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~ 424 (460)
..+|+|++-...+.. ...... +.| +--.+.+.++.+.|..+|++++.. ..+++..++
T Consensus 78 ~~~~ii~ls~~~~~~-~~~~~~-~~g~~~~~l~kP~~~~~L~~~i~~~~~~--~~~~~~~~~ 135 (154)
T 2rjn_A 78 PDIERVVISGYADAQ-ATIDAV-NRGKISRFLLKPWEDEDVFKVVEKGLQL--AFLREENLR 135 (154)
T ss_dssp TTSEEEEEECGGGHH-HHHHHH-HTTCCSEEEESSCCHHHHHHHHHHHHHH--HHHHHHTTS
T ss_pred CCCcEEEEecCCCHH-HHHHHH-hccchheeeeCCCCHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 367888775544432 333332 345 655666889999999999999875 444444333
No 356
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=31.97 E-value=73 Score=27.12 Aligned_cols=40 Identities=13% Similarity=0.217 Sum_probs=28.5
Q ss_pred CCCcEEEEEcCCCCCC----HHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 4 QDHVHVAILPLPAVGH----VNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh----~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
.+|.+|.+++....+. ..-...|++.|+++|+.|..-+.+
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 3455799997766553 335678889999999988776553
No 357
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=31.92 E-value=36 Score=26.01 Aligned_cols=36 Identities=14% Similarity=0.177 Sum_probs=23.5
Q ss_pred HHHHHcCCCCccEEEEcCCcc--hHHHHHHH---hCCceEEEe
Q 012587 102 KEMVSDSKSPVNCIITDGYMS--RAIDAARE---VGVSIIYFR 139 (460)
Q Consensus 102 ~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~---lgiP~v~~~ 139 (460)
.+++++. +||+|+.|...+ -|..+++. .++|+|.++
T Consensus 46 l~~~~~~--~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 46 LDIARKG--QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHC--CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHhC--CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 3445554 999999998866 34445543 468876654
No 358
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=31.83 E-value=64 Score=27.32 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.|.++++.++ |- --.++++.|.++||+|+++..
T Consensus 5 ~k~vlVtGas-gg--iG~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 5 KGAVLITGAS-RG--IGEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CCEEEESSTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cH--HHHHHHHHHHHCCCEEEEEEC
Confidence 3566666655 32 246889999999999998875
No 359
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=31.77 E-value=66 Score=28.96 Aligned_cols=38 Identities=21% Similarity=0.092 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCCCC----HHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGH----VNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh----~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
++||+++..|..+. +.....++++|.++||+|..+...
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899998875443 235678999999999999999853
No 360
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=31.60 E-value=48 Score=27.49 Aligned_cols=37 Identities=3% Similarity=0.015 Sum_probs=25.9
Q ss_pred CcEEEEEcCCC--CCCHHHHHH-HHHH-HHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPA--VGHVNSMLN-LAEL-LGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~--~Gh~~p~l~-La~~-L~~rGH~Vt~~~~ 42 (460)
||||+++.... .|+..-+.. +++. |.++|++|.++--
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 57998887654 366555554 4566 7778999988764
No 361
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=31.60 E-value=15 Score=32.27 Aligned_cols=33 Identities=15% Similarity=0.365 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCC----CeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAG----IKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rG----H~Vt~~~~ 42 (460)
++|||+|+-.|..|. .+++.|.++| |+|+++..
T Consensus 3 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp SSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 457999998877665 4778898899 89988754
No 362
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=31.58 E-value=2.4e+02 Score=23.96 Aligned_cols=40 Identities=10% Similarity=0.170 Sum_probs=26.8
Q ss_pred HHHHHHHHcCCCC-ccEEEEcCCcc----hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSDSKSP-VNCIITDGYMS----RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~~~~~-pD~vv~D~~~~----~~~~~A~~lgiP~v~~~~~ 141 (460)
..++.++.. + +|.||...... .....+...|||+|.+...
T Consensus 49 ~~i~~l~~~---~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~ 93 (276)
T 3ksm_A 49 QILSYHLSQ---APPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSD 93 (276)
T ss_dssp HHHHHHHHH---SCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHh---CCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecC
Confidence 344556665 6 99999876422 3455566789999997653
No 363
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=31.48 E-value=25 Score=30.82 Aligned_cols=30 Identities=20% Similarity=0.310 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
|||.|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeC
Confidence 5899987776664 57899999999999853
No 364
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=31.40 E-value=42 Score=32.65 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~ 42 (460)
++||||.|+-.|..| +.+|..|+++ ||+|+++..
T Consensus 7 ~~~mkI~VIG~G~vG-----~~~A~~La~~g~g~~V~~~D~ 42 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVG-----GPTCAMIAHKCPHITVTVVDM 42 (481)
T ss_dssp CCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 456899999888777 4678888888 799999853
No 365
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=31.28 E-value=48 Score=29.74 Aligned_cols=34 Identities=6% Similarity=-0.102 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
||+|++.- +.|.+ -..|+++|.++||+|+.++..
T Consensus 4 ~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIYG--GTGYI--GKFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCCEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECC
T ss_pred ccEEEEEc--CCchh--HHHHHHHHHhCCCcEEEEECC
Confidence 56776653 33443 246889999999999999864
No 366
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=31.25 E-value=1.6e+02 Score=21.90 Aligned_cols=48 Identities=6% Similarity=-0.114 Sum_probs=34.5
Q ss_pred hCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 364 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
..+|+|++-...+ ......+. +.|+--.+.+.++.++|..+|++++..
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~-~~g~~~~l~kP~~~~~l~~~i~~~~~~ 121 (142)
T 2qxy_A 74 PDTKVAVLSAYVD-KDLIINSV-KAGAVDYILKPFRLDYLLERVKKIISS 121 (142)
T ss_dssp TTCEEEEEESCCC-HHHHHHHH-HHTCSCEEESSCCHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCC-HHHHHHHH-HCCcceeEeCCCCHHHHHHHHHHHHhh
Confidence 3688888765444 33444442 568777777889999999999999874
No 367
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=31.14 E-value=48 Score=28.95 Aligned_cols=32 Identities=6% Similarity=-0.012 Sum_probs=26.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+++++.++.| -=.++|+.|.++|++|.++..
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 78888888765 346889999999999998763
No 368
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=31.11 E-value=1.8e+02 Score=26.78 Aligned_cols=90 Identities=6% Similarity=0.063 Sum_probs=55.1
Q ss_pred cEEEEEcCCCCC----CHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVG----HVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRT 82 (460)
Q Consensus 7 ~~il~~~~~~~G----h~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (460)
.++++++.|+.+ ...-+..+.++|.+.+.+|.+++.....+.+.+. .+++.+..+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~----------~~~v~~~~~----------- 290 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTL----------PRNVRAVGW----------- 290 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSC----------CTTEEEESS-----------
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccC----------CCcEEEEcc-----------
Confidence 367888888873 3344778889999889999888875432222111 112222211
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEE
Q 012587 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~ 138 (460)
. .+.+++. ..|++|+.... ....=|-..|+|.|.+
T Consensus 291 ---------------~-~~~~ll~----~ad~~v~~~G~-~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 291 ---------------T-PLHTLLR----TCTAVVHHGGG-GTVMTAIDAGIPQLLA 325 (398)
T ss_dssp ---------------C-CHHHHHT----TCSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred ---------------C-CHHHHHh----hCCEEEECCCH-HHHHHHHHhCCCEEEc
Confidence 0 1233443 46999987543 3556677889999995
No 369
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=31.07 E-value=20 Score=29.39 Aligned_cols=15 Identities=20% Similarity=0.259 Sum_probs=11.5
Q ss_pred CCCCCCcEEEEEcCC
Q 012587 1 MEKQDHVHVAILPLP 15 (460)
Q Consensus 1 ~~~~~~~~il~~~~~ 15 (460)
|+..+|+||||+|.|
T Consensus 13 ~~~~~M~kVLFVCtG 27 (173)
T 4etm_A 13 MGRGSMISVLFVCLG 27 (173)
T ss_dssp -CCSSCEEEEEEESS
T ss_pred CCCCCccEEEEEeCC
Confidence 345678999999987
No 370
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=31.06 E-value=42 Score=27.90 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+|+||+|+...+.=.+. ++...+.|++.|++|++++...
T Consensus 3 ~M~kV~ill~dGfe~~E-~~~p~~vl~~ag~~v~~~s~~~ 41 (194)
T 4gdh_A 3 HMVKVCLFVADGTDEIE-FSAPWGIFKRAEIPIDSVYVGE 41 (194)
T ss_dssp --CCEEEEEETTCCHHH-HHHHHHHHHHTTCCEEEEEESS
T ss_pred CCCEEEEEECCCcCHHH-HHHHHHHHHHCCCeEEEEEEcC
Confidence 58899999887654443 4455677889999999887533
No 371
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=31.01 E-value=88 Score=22.92 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=25.1
Q ss_pred HHHHcCCCCccEEEEcCCcc--hHHHHHHHh-------CCceEEEecch
Q 012587 103 EMVSDSKSPVNCIITDGYMS--RAIDAAREV-------GVSIIYFRTIS 142 (460)
Q Consensus 103 ~~~~~~~~~pD~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 142 (460)
+.++.. +||+|+.|.... .+..+.+.+ ++|+|.++...
T Consensus 40 ~~l~~~--~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 40 EKLSEF--TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHTTB--CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHhc--CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 344444 899999997655 355555543 57888877643
No 372
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=30.86 E-value=33 Score=29.71 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
...+||.|+-.|..| .++|+.|.++||+|+++..
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 345799999766655 4678999999999999865
No 373
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=30.85 E-value=47 Score=28.65 Aligned_cols=33 Identities=18% Similarity=0.107 Sum_probs=25.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.|+++++.++.| -=.++++.|.++|++|.++..
T Consensus 2 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 2 NRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777777653 346889999999999998864
No 374
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=30.64 E-value=33 Score=28.88 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=22.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||++. |+.|.+ =..|+++|.++||+|+.++.
T Consensus 1 MkilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVL--GATGRA--GSAIVAEARRRGHEVLAVVR 32 (224)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--cCCCHH--HHHHHHHHHHCCCEEEEEEe
Confidence 465554 333433 35789999999999999985
No 375
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=30.59 E-value=68 Score=27.84 Aligned_cols=32 Identities=6% Similarity=0.012 Sum_probs=25.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+++++.++.| ==.++|+.|.++|++|.++..
T Consensus 9 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 9 RTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 77888877754 236899999999999998854
No 376
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=30.41 E-value=1.7e+02 Score=26.11 Aligned_cols=115 Identities=7% Similarity=-0.012 Sum_probs=70.1
Q ss_pred HHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhC
Q 012587 286 IEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAG 365 (460)
Q Consensus 286 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~G 365 (460)
..+.+.++..+.++++.. +.-..+++.+.+..+..++= -|+++ .=...|.+.+..|+.+|
T Consensus 155 ~~~~~~l~~~~~Dlivla--------gym~il~~~~l~~~~~~~iN----------iHpSl--LP~~rG~~p~~~Ai~~G 214 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLA--------RYMQILSDDLSAFLSGRCIN----------IHHSF--LPGFKGAKPYHQAHTRG 214 (287)
T ss_dssp HHHHHHHHHHTCSEEEES--------SCCSCCCHHHHHHHTTSEEE----------EESSC--TTTTCSSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEhh--------hhhhhcCHHHHhhccCCeEE----------ECccc--ccCCCCchHHHHHHHcC
Confidence 457788888888888877 33346777776654433331 12222 22345899999999999
Q ss_pred Cceecccccc--cchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 012587 366 MPMICWPSFA--DQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMA 426 (460)
Q Consensus 366 vP~l~~P~~~--DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~ 426 (460)
+....+-.+. +..+-+..+. .--+.+...-|.++|.+.+..+-. .-|.+..+.+.
T Consensus 215 ~k~tG~Tvh~v~~~lD~GpIi~---Q~~v~i~~~dt~~~L~~r~~~~e~---~~l~~av~~~~ 271 (287)
T 3nrb_A 215 VKLIGATAHFVTADLDEGPIIA---QDVEHVSHRDSAEDLVRKGRDIER---RVLSRAVLLFL 271 (287)
T ss_dssp CSEEEEEEEECCSSSSCCCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CCeEEEEEEEECCCCcCCCEEE---EEEEecCCCCCHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 9987776542 3444444331 223333346788888877776644 55666665543
No 377
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=30.38 E-value=44 Score=32.21 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=27.7
Q ss_pred HHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEE
Q 012587 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (460)
Q Consensus 100 ~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~ 138 (460)
.+.+++++. +||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~~--~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNE--GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHS--CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHhc--CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 456777776 9999998864 577899999999986
No 378
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=30.31 E-value=32 Score=31.23 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=23.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+||+|++.- +-|-+ -..|++.|.++||+|+.+..
T Consensus 19 ~~~~~vlVTG--atG~i--G~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 19 SHMKKVFITG--ICGQI--GSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp --CCEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEeC--CccHH--HHHHHHHHHHCCCEEEEEEC
Confidence 4567776653 22322 35788999999999999875
No 379
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=30.19 E-value=2e+02 Score=24.35 Aligned_cols=43 Identities=16% Similarity=0.065 Sum_probs=28.6
Q ss_pred eeeeecCh-Hhhhc-ccccccccccCChhHHHHHHH---------hCCceecccc
Q 012587 330 CIAGWVPQ-EEVLA-HSAVGGFLTHCGWNSTLESIV---------AGMPMICWPS 373 (460)
Q Consensus 330 ~~~~~vp~-~~il~-~~~~~~~I~HGG~gs~~eal~---------~GvP~l~~P~ 373 (460)
.++..++. ..++. .++ ..++--||.||+-|... +++|++++-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sd-a~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSD-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCC-EEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 34455553 44443 444 36888899999988762 3899998864
No 380
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=30.06 E-value=82 Score=27.00 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+.|+++++.++.| ==.++++.|.++|++|.+...
T Consensus 3 ~~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 3 MTKSALVTGASRG---IGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CSCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3477888877653 345789999999999998765
No 381
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=30.02 E-value=32 Score=30.63 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=25.4
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 689999777665 4678999999999998764
No 382
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=30.01 E-value=33 Score=28.71 Aligned_cols=31 Identities=29% Similarity=0.293 Sum_probs=23.4
Q ss_pred cEEEEEc-CCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILP-LPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~-~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||+|+- .|..| ..+++.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 4888875 44444 3678899999999999865
No 383
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=30.01 E-value=48 Score=27.90 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeCcc
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEH 44 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~~~ 44 (460)
.|.||+|+..++.-.+. ....+..|.++ |++|.+++...
T Consensus 2 ~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~ 41 (206)
T 3f5d_A 2 SLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDP 41 (206)
T ss_dssp -CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSS
T ss_pred CccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCC
Confidence 36799999998776654 44667888888 99999999744
No 384
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=29.92 E-value=3e+02 Score=24.59 Aligned_cols=41 Identities=5% Similarity=0.142 Sum_probs=26.2
Q ss_pred HHHHHHHHc-CCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSD-SKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~-~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~ 141 (460)
..+++++.. . ++|.||.-.... .....+...|||+|.+...
T Consensus 51 ~~i~~~i~~~~--~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~ 95 (350)
T 3h75_A 51 QQARELFQGRD--KPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSP 95 (350)
T ss_dssp HHHHHHHHSSS--CCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESC
T ss_pred HHHHHHHhcCC--CCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCC
Confidence 445666664 4 899888754222 2233455679999998764
No 385
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=29.84 E-value=90 Score=25.30 Aligned_cols=40 Identities=8% Similarity=0.028 Sum_probs=32.0
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+|..|.|+...+.|-..=+..|++.|.++|++|.++....
T Consensus 3 ~~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 3 AMNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp -CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 3445667776788998888899999999999999998643
No 386
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=29.81 E-value=32 Score=30.37 Aligned_cols=47 Identities=13% Similarity=0.087 Sum_probs=39.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHH--------HHhC-CCeEEEEeCccchhHHhhc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAEL--------LGHA-GIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~--------L~~r-GH~Vt~~~~~~~~~~~~~~ 52 (460)
..||++.+.++..|-....-++.. |..+ |++|..++..-..+.+.+.
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~a 175 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKK 175 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHH
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHH
Confidence 468999999999999999999977 9999 9999999875555555444
No 387
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=29.73 E-value=45 Score=31.88 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=25.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||+|+-.|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 589999777766 5688899999999998854
No 388
>2qh9_A UPF0215 protein AF_1433; structural genomics, PSI-2, MCSG, PR structure initiative; 1.80A {Archaeoglobus fulgidus}
Probab=29.73 E-value=89 Score=25.80 Aligned_cols=40 Identities=25% Similarity=0.323 Sum_probs=28.7
Q ss_pred HHHHHHHcCCCC--ccEEEEcCCcch------HHHHHHHhCCceEEEe
Q 012587 100 LLKEMVSDSKSP--VNCIITDGYMSR------AIDAAREVGVSIIYFR 139 (460)
Q Consensus 100 ~l~~~~~~~~~~--pD~vv~D~~~~~------~~~~A~~lgiP~v~~~ 139 (460)
.+.++++.++.+ +|+|+.|...++ ...+...+|+|+|.+.
T Consensus 51 ~i~~~~~~l~~~p~~~vvllDG~g~agfn~~di~~l~~~~~~P~I~V~ 98 (184)
T 2qh9_A 51 KLISMVRRSKFREQIKCIFLPGITLGGFNLVDIQRVYRETKIPVVVVM 98 (184)
T ss_dssp HHHHHHTTCTTTTTEEEEEESSSEETTTEECCHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHhcCCCCCCcEEEECCEeeccCCEeCHHHHHHhhCCCEEEEE
Confidence 445556555334 599999988662 3468899999999875
No 389
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=29.67 E-value=76 Score=25.15 Aligned_cols=36 Identities=14% Similarity=0.018 Sum_probs=26.1
Q ss_pred CCCCcEEEEEcCCCCCCH-HHHH-HHHHHHHhCCCeEEEEeC
Q 012587 3 KQDHVHVAILPLPAVGHV-NSML-NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~-~p~l-~La~~L~~rGH~Vt~~~~ 42 (460)
+|.||||++-+= |. +.+. .|.+.|.++||+|.=+++
T Consensus 4 ~m~~mkI~igsD----haG~~lK~~i~~~L~~~G~eV~D~G~ 41 (148)
T 4em8_A 4 SMVVKRVFLSSD----HAGVELRLFLSAYLRDLGCEVFDCGC 41 (148)
T ss_dssp CCSCSEEEEEEC----GGGHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cceeeEEEEEEC----chhHHHHHHHHHHHHHCCCEEEEeCC
Confidence 467789988764 33 3333 577889999999987766
No 390
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=29.56 E-value=76 Score=24.48 Aligned_cols=37 Identities=16% Similarity=0.379 Sum_probs=26.1
Q ss_pred HHHcCCCCccEEEEcCCcc--hHHHHHHHh-------CCceEEEecch
Q 012587 104 MVSDSKSPVNCIITDGYMS--RAIDAAREV-------GVSIIYFRTIS 142 (460)
Q Consensus 104 ~~~~~~~~pD~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 142 (460)
.+++. +||+|+.|...+ -|..+++.+ .+|+|.++...
T Consensus 52 ~~~~~--~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 52 MLKKG--DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHH--CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHhC--CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 34443 899999998876 466666654 48888876643
No 391
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=29.53 E-value=88 Score=25.17 Aligned_cols=43 Identities=12% Similarity=-0.062 Sum_probs=33.6
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhh
Q 012587 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (460)
Q Consensus 9 il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (460)
.+++..++.--+++.+-||..-+.-|++|+++.+-.-...+.+
T Consensus 8 ~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 8 NLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 4555567888899999999999999999999998444444444
No 392
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=29.52 E-value=44 Score=25.04 Aligned_cols=65 Identities=9% Similarity=0.048 Sum_probs=44.2
Q ss_pred hcccccccccccCChhH---------HHHHHHhCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHH
Q 012587 341 LAHSAVGGFLTHCGWNS---------TLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLM 411 (460)
Q Consensus 341 l~~~~~~~~I~HGG~gs---------~~eal~~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l 411 (460)
+..+++ +|--.|..| +..|...|+|++.+=-++.+. .-..+ ++.+..+.- .|.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l-~~~a~~iV~---Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPEL-EAVSSEVVG---WNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTH-HHHCSEEEC---SCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHH-HhhCceecc---CCHHHHHHHHHhcc
Confidence 445666 888888776 667888999999887766542 12225 333333333 78899999998876
Q ss_pred h
Q 012587 412 V 412 (460)
Q Consensus 412 ~ 412 (460)
+
T Consensus 109 ~ 109 (111)
T 1eiw_A 109 D 109 (111)
T ss_dssp C
T ss_pred C
Confidence 4
No 393
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=29.52 E-value=34 Score=31.20 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=23.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+++++|++. |+-|-+ -..|++.|.++||+|+.++.
T Consensus 25 ~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILIT--GGAGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEE--cCccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 456777665 333433 35788999999999999875
No 394
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=29.48 E-value=3e+02 Score=24.65 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=31.6
Q ss_pred HHHHHHHHcC-CCCccEEEEcCCcc--hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSDS-KSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~~-~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~~ 141 (460)
..+.++++.+ +.+..+|+++.... .+-.+|+..|++.+.+.+.
T Consensus 226 ~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~l 271 (312)
T 2o1e_A 226 ASLAKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTEVLNTL 271 (312)
T ss_dssp HHHHHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEECCCCT
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCcEEEeccc
Confidence 4455555554 35899999998776 4788899999999876543
No 395
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=29.45 E-value=59 Score=31.21 Aligned_cols=33 Identities=27% Similarity=0.342 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+..||+|+-.|..| +++|+.|+++||+|+..-.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 34699999887655 3569999999999999865
No 396
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=28.93 E-value=56 Score=27.76 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=25.3
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+|+++++.++.| =-.++++.|.++|++|.+...
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777777643 345889999999999988875
No 397
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=28.91 E-value=99 Score=22.05 Aligned_cols=32 Identities=9% Similarity=0.118 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+|+++|..+ ......+..|.+.|++|..+.+
T Consensus 57 ~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 57 ETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp SEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 4788888543 4577889999999998887754
No 398
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=28.86 E-value=1.7e+02 Score=26.06 Aligned_cols=115 Identities=7% Similarity=-0.012 Sum_probs=70.7
Q ss_pred HHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhC
Q 012587 286 IEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAG 365 (460)
Q Consensus 286 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~G 365 (460)
..+.+.++..+.++++.. +.-..+++.+.+..+..++=. |+++ .=...|.+.+..|+.+|
T Consensus 156 ~~~~~~l~~~~~Dlivla--------gy~~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~A~~~G 215 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLA--------RYMQILSDEMSARLAGRCINI----------HHSF--LPGFKGAKPYHQAFDRG 215 (288)
T ss_dssp HHHHHHHHHHTCCEEEES--------SCCSCCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEhh--------hhhhhCCHHHHhhhcCCeEEe----------Cccc--ccCCCCchHHHHHHHcC
Confidence 457788888888888877 343467787776544333311 2222 22345889999999999
Q ss_pred Cceeccccc--ccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 012587 366 MPMICWPSF--ADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMA 426 (460)
Q Consensus 366 vP~l~~P~~--~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~ 426 (460)
+....+-.+ .+..+-+..+. .--+.+...-|.++|.+.+..+-. .-|.+..+.+.
T Consensus 216 ~~~~G~Tvh~v~~~~D~GpIi~---Q~~v~i~~~dt~~~L~~r~~~~e~---~~l~~av~~~~ 272 (288)
T 3obi_A 216 VKLIGATAHYVTSALDEGPIID---QDVERISHRDTPADLVRKGRDIER---RVLSRALHYHL 272 (288)
T ss_dssp CSEEEEEEEECCSSTTCSCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CCEEEEEEEEECCCCcCCCeEE---EEEEecCCCCCHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 998777654 24444444442 223334346788888877776644 45666655543
No 399
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=28.81 E-value=1.4e+02 Score=27.17 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=25.6
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeC
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNT 42 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~ 42 (460)
+++++||+|+-.|..|. ..++.|.+. |++|+-++.
T Consensus 2 M~~~~~vgiiG~G~~g~-----~~~~~l~~~~~~~lvav~d 37 (354)
T 3db2_A 2 MYNPVGVAAIGLGRWAY-----VMADAYTKSEKLKLVTCYS 37 (354)
T ss_dssp CCCCEEEEEECCSHHHH-----HHHHHHTTCSSEEEEEEEC
T ss_pred CCCcceEEEEccCHHHH-----HHHHHHHhCCCcEEEEEEC
Confidence 45568999999887664 356777776 888876665
No 400
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=28.78 E-value=33 Score=32.88 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=25.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.++|||.|+-.|..| +++|..|++ ||+|+.+..
T Consensus 34 ~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~ 66 (432)
T 3pid_A 34 SEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDI 66 (432)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECS
T ss_pred cCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEec
Confidence 456899999877666 456778887 999999864
No 401
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=28.78 E-value=87 Score=28.74 Aligned_cols=36 Identities=8% Similarity=0.139 Sum_probs=22.9
Q ss_pred CCCCcEEEEEcCCCCCCHHHHHHHHHHHHhC-CCeEEEEeC
Q 012587 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNT 42 (460)
Q Consensus 3 ~~~~~~il~~~~~~~Gh~~p~l~La~~L~~r-GH~Vt~~~~ 42 (460)
+|+++||+|+-.|..|. ..+++.|.+. |++|+-++.
T Consensus 24 ~m~~~rigiIG~G~~g~----~~~~~~l~~~~~~~l~av~d 60 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAW----RRALPALEAEPLTEVTAIAS 60 (350)
T ss_dssp --CCEEEEEESCCHHHH----HTHHHHHHHCTTEEEEEEEE
T ss_pred CCCceEEEEEcCcHHHH----HHHHHHHHhCCCeEEEEEEc
Confidence 46678999998876553 1244555555 788876664
No 402
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=28.74 E-value=29 Score=31.11 Aligned_cols=33 Identities=12% Similarity=0.083 Sum_probs=26.1
Q ss_pred hhhcccccccccccCChhHHHHHHHh----CCceecccc
Q 012587 339 EVLAHSAVGGFLTHCGWNSTLESIVA----GMPMICWPS 373 (460)
Q Consensus 339 ~il~~~~~~~~I~HGG~gs~~eal~~----GvP~l~~P~ 373 (460)
.+-..+++ +|.=||=||+.+++.. ++|++.++.
T Consensus 59 ~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 59 EIGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred hcccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 34445676 9999999999999853 789998874
No 403
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=28.73 E-value=23 Score=31.52 Aligned_cols=28 Identities=11% Similarity=0.158 Sum_probs=24.0
Q ss_pred cccccccccCChhHHHHHHHh------CCceecccc
Q 012587 344 SAVGGFLTHCGWNSTLESIVA------GMPMICWPS 373 (460)
Q Consensus 344 ~~~~~~I~HGG~gs~~eal~~------GvP~l~~P~ 373 (460)
+++ +|.=||=||+.+++.. ++|++.+|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 455 9999999999999875 889998875
No 404
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=28.66 E-value=42 Score=28.49 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=23.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||+++++.++.| ==.++++.|.++|++|.++..
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 466777776643 246889999999999998875
No 405
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=28.63 E-value=1.7e+02 Score=27.12 Aligned_cols=126 Identities=11% Similarity=0.073 Sum_probs=0.0
Q ss_pred CCCcEEEEEecCcccCCHHHHHHHHHHHhhC--CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhc
Q 012587 265 PKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLA 342 (460)
Q Consensus 265 ~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~ 342 (460)
++..+..|..| ++ +.-+.++.+. +.+++-++ .....-.++..+..-+.-|-..++++.
T Consensus 6 ~~~rv~VvG~G-~g-------~~h~~a~~~~~~~~elvav~------------~~~~~~a~~~a~~~gv~~~~~~~~l~~ 65 (372)
T 4gmf_A 6 PKQRVLIVGAK-FG-------EMYLNAFMQPPEGLELVGLL------------AQGSARSRELAHAFGIPLYTSPEQITG 65 (372)
T ss_dssp -CEEEEEECST-TT-------HHHHHTTSSCCTTEEEEEEE------------CCSSHHHHHHHHHTTCCEESSGGGCCS
T ss_pred CCCEEEEEehH-HH-------HHHHHHHHhCCCCeEEEEEE------------CCCHHHHHHHHHHhCCCEECCHHHHhc
Q ss_pred ccccccccc----cCChhH--HHHHHHhCCceec-ccccccchhhHHHHHhhhceeeeec-CCcchHHHHHHHHHH
Q 012587 343 HSAVGGFLT----HCGWNS--TLESIVAGMPMIC-WPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDL 410 (460)
Q Consensus 343 ~~~~~~~I~----HGG~gs--~~eal~~GvP~l~-~P~~~DQ~~na~~~~e~~G~g~~~~-~~~~~~~l~~~i~~~ 410 (460)
..++-.+.+ |++.+. +.+||.+|+++++ -|+..|+-.--.+++++.|+-..+. .-.--..+++.+...
T Consensus 66 ~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~~yr~~p~vr~~i~~~ 141 (372)
T 4gmf_A 66 MPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCCYWINTFYPHTRAGRTWLRDA 141 (372)
T ss_dssp CCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCCEEEECSGGGSHHHHHHHHHH
T ss_pred CCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCEEEEcCcccCCHHHHHHHHHH
No 406
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=28.50 E-value=39 Score=32.64 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
++++||+|+-.|..| ..||..|+++||+|+++..
T Consensus 35 ~~~~kV~VIGaG~MG-----~~iA~~la~~G~~V~l~D~ 68 (463)
T 1zcj_A 35 QPVSSVGVLGLGTMG-----RGIAISFARVGISVVAVES 68 (463)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHTTTCEEEEECS
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEC
Confidence 456799999887777 4688999999999999864
No 407
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=28.45 E-value=35 Score=30.42 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=25.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 4899998888775 578899999999998754
No 408
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=28.39 E-value=1.8e+02 Score=26.97 Aligned_cols=63 Identities=13% Similarity=0.096 Sum_probs=37.1
Q ss_pred eecChHhhhcccccccccccCCh----hHHHHHHHhCCceec-cccc--ccchhhHHHHHhhhceeeeec
Q 012587 333 GWVPQEEVLAHSAVGGFLTHCGW----NSTLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 333 ~~vp~~~il~~~~~~~~I~HGG~----gs~~eal~~GvP~l~-~P~~--~DQ~~na~~~~e~~G~g~~~~ 395 (460)
.+-...++|..+++.+++----. --+.+||.+|+++++ -|+. .++..--..++++.|+-+.+.
T Consensus 52 ~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 121 (387)
T 3moi_A 52 VFATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVG 121 (387)
T ss_dssp EESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEEC
T ss_pred eECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEE
Confidence 34567888876444445533222 357889999999986 4543 344333333335667766654
No 409
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=28.39 E-value=45 Score=29.65 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=23.9
Q ss_pred CcEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|++|++.-. |..| ..|+++|.++||+|+.++..
T Consensus 4 ~~~ilVtGatG~iG-----~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIGATGYIG-----RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEESTTSTTH-----HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEcCCcHHH-----HHHHHHHHhCCCCEEEEECC
Confidence 567766543 3444 46889999999999998763
No 410
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=28.32 E-value=53 Score=28.64 Aligned_cols=33 Identities=18% Similarity=0.107 Sum_probs=27.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
-|.++++.++.| ==.++|+.|+++|++|.+...
T Consensus 2 nK~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~ 34 (247)
T 3ged_A 2 NRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 378888888876 346889999999999998764
No 411
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=28.31 E-value=43 Score=29.25 Aligned_cols=33 Identities=12% Similarity=-0.004 Sum_probs=25.8
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|+++++.++.| ==.++|+.|.++|++|.++...
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67788877654 3458899999999999998753
No 412
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=28.28 E-value=1.6e+02 Score=27.14 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=28.0
Q ss_pred HHHHHcCCCCccEEEEcCCcc---hHHHHHHHhCCceEEEecch
Q 012587 102 KEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 102 ~~~~~~~~~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~ 142 (460)
.+.+++. ++|+||.=.-.. .+-.+|...++|+|.+-|+.
T Consensus 80 ~~~~~~~--~~D~IIavGGGs~iD~aK~iA~~~~~p~i~IPTTa 121 (353)
T 3hl0_A 80 VEAYRAA--GADCVVSLGGGSTTGLGKAIALRTDAAQIVIPTTY 121 (353)
T ss_dssp HHHHHHT--TCSEEEEEESHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred HHHHhcc--CCCEEEEeCCcHHHHHHHHHHhccCCCEEEEeCCc
Confidence 3444454 899998654433 56677788999999988875
No 413
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=28.10 E-value=3.1e+02 Score=24.57 Aligned_cols=118 Identities=8% Similarity=0.033 Sum_probs=71.7
Q ss_pred HHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHH
Q 012587 283 DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESI 362 (460)
Q Consensus 283 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal 362 (460)
.+-..+.+.++..+.++++..+ .-..+|+.+.+..+..++ =-|+++ .=...|.+.+..|+
T Consensus 168 ~~~~~~~~~l~~~~~DliVlag--------ym~IL~~~~l~~~~~~~I----------NiHpSl--LP~frG~~p~~~Ai 227 (302)
T 3o1l_A 168 PAFAEVSRLVGHHQADVVVLAR--------YMQILPPQLCREYAHQVI----------NIHHSF--LPSFVGAKPYHQAS 227 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEESS--------CCSCCCTTHHHHTTTCEE----------EEESSC--TTSSCSSCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEHhH--------hhhhcCHHHHhhhhCCeE----------EeCccc--ccCCCCccHHHHHH
Confidence 3445677888888888888873 333567777655443332 112232 22345899999999
Q ss_pred HhCCceeccccc--ccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 012587 363 VAGMPMICWPSF--ADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMA 426 (460)
Q Consensus 363 ~~GvP~l~~P~~--~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~ 426 (460)
.+|+....+-.+ .+..+-+..+. .--+.+...-|.++|.+.+.++-. .-|.+..+.+.
T Consensus 228 ~~G~k~tG~TvH~v~~~lD~GpII~---Q~~v~I~~~dt~~~L~~r~~~~e~---~~l~~av~~~~ 287 (302)
T 3o1l_A 228 LRGVKLIGATCHYVTEELDAGPIIE---QDVVRVSHRDSIENMVRFGRDVEK---MVLARGLRAHL 287 (302)
T ss_dssp HHTCSEEEEEEEECCSSTTCSCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEECCCCcCCCeEE---EEEEecCCCCCHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 999998777654 24444444442 223333346788888877776643 45666655543
No 414
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=28.00 E-value=1.2e+02 Score=24.86 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=29.3
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
+++||+|+..++.. ..-+....+.|.+.|++|++++..
T Consensus 22 ~~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 59 (193)
T 1oi4_A 22 LSKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQ 59 (193)
T ss_dssp CCCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECC
Confidence 35699999987644 334566788899999999999874
No 415
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=27.97 E-value=70 Score=23.30 Aligned_cols=46 Identities=7% Similarity=-0.009 Sum_probs=33.4
Q ss_pred hCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 364 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
..+|++++ .. +......... +.|+--.+.+.++.++|...+++++.
T Consensus 79 ~~~~ii~~-~~-~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII-GN-PDGFAQHRKL-KAHADEYVAKPVDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE-EC-GGGHHHHHHS-TTCCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEE-ec-CCchhHHHHH-HhCcchheeCCCCHHHHHHHHHHHHc
Confidence 46899888 43 3344444553 56876677688999999999998875
No 416
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=27.93 E-value=35 Score=32.08 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=25.9
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
++.++|+|+-.|-- =+.+|..|+++|++|+++=.
T Consensus 21 ~~~~dV~IVGaG~a-----Gl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 21 QGHMKAIVIGAGIG-----GLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCHH-----HHHHHHHHHhCCCCEEEEeC
Confidence 45578998866643 37889999999999999854
No 417
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=27.91 E-value=1.1e+02 Score=27.85 Aligned_cols=82 Identities=10% Similarity=-0.079 Sum_probs=0.0
Q ss_pred EEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccccccc
Q 012587 269 VIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGG 348 (460)
Q Consensus 269 ~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~ 348 (460)
.|+++..|........+..+...++..+..+.+... .-+....+. -.......+++
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t-----------~~~~~a~~~-----------~~~~~~~~~d~-- 83 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYAT-----------EKIGDATLE-----------AERAMHENYDV-- 83 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEEC-----------CSTTHHHHH-----------HHHHTTTTCSE--
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEe-----------cCcchHHHH-----------HHHHhhcCCCE--
Q ss_pred ccccCChhHHHHHHHh------CCceeccccc
Q 012587 349 FLTHCGWNSTLESIVA------GMPMICWPSF 374 (460)
Q Consensus 349 ~I~HGG~gs~~eal~~------GvP~l~~P~~ 374 (460)
+|.=||=||+.|++.. ++|+.++|..
T Consensus 84 vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 84 LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
No 418
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=27.89 E-value=1.1e+02 Score=23.02 Aligned_cols=37 Identities=8% Similarity=-0.000 Sum_probs=26.7
Q ss_pred EEEEEcC-CCCCCH--HHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 8 HVAILPL-PAVGHV--NSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 8 ~il~~~~-~~~Gh~--~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|++|+.. +-+|+- .-.+.+|.++...||+|.++-..+
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 5654444 445655 557889999999999999998744
No 419
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=27.72 E-value=39 Score=30.50 Aligned_cols=32 Identities=22% Similarity=0.299 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
+|||+|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 47999998777664 578889999999988764
No 420
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=27.69 E-value=89 Score=27.11 Aligned_cols=32 Identities=28% Similarity=0.272 Sum_probs=24.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+++++.++.| ==.++++.|.++||+|.++..
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVTGAAQG---IGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCc---HHHHHHHHHHHCCCEEEEEEC
Confidence 67777766542 235789999999999998874
No 421
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=27.69 E-value=33 Score=26.59 Aligned_cols=35 Identities=11% Similarity=0.293 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 18 GHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 18 Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
||++..-.|-+.|.++|.+..+++.+.+...+...
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~YlTGf 35 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYLTGF 35 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHHHCC
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceeecCC
Confidence 78888899999999999999999998877776544
No 422
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=27.63 E-value=2e+02 Score=25.43 Aligned_cols=39 Identities=15% Similarity=0.277 Sum_probs=29.8
Q ss_pred HHHHHHHcCCCCccEEEEcCCcc--hHHHHHHHhCCceEEEec
Q 012587 100 LLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 100 ~l~~~~~~~~~~pD~vv~D~~~~--~~~~~A~~lgiP~v~~~~ 140 (460)
.+.+.+++- +..+|+++..+. .+-.+|+..|++++.+.+
T Consensus 219 ~l~~~ik~~--~v~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 219 EIQDFVKEY--NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp HHHHHHHHT--TCCEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHc--CCCEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 344555554 999999998766 567889999999988654
No 423
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=27.62 E-value=67 Score=28.36 Aligned_cols=37 Identities=14% Similarity=0.020 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCCC--CHHHHH-HHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVG--HVNSML-NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~G--h~~p~l-~La~~L~~rGH~Vt~~~~ 42 (460)
||||+++...-++ .-.-+. .+++.|.+.||+|.++--
T Consensus 2 MmkiLiI~gSpr~~s~t~~la~~~~~~l~~~g~eV~~~dL 41 (273)
T 1d4a_A 2 GRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDL 41 (273)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCEEEEEEeCCCCccHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 6799887765443 222222 345556778999999764
No 424
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=27.61 E-value=80 Score=25.13 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=28.0
Q ss_pred cEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l-~La~~L~~rGH~Vt~~~~ 42 (460)
|||+++-....|+..-+. .|++.|.+.|++|.++.-
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 578777777789887765 578889889999988764
No 425
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=27.61 E-value=53 Score=29.18 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|++|++.- +.|.+ -..|+++|.++||+|+.++..
T Consensus 2 ~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILILG--PTGAI--GRHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCCEEEES--TTSTT--HHHHHHHHHHHTCCEEEEECC
T ss_pred CcEEEEEC--CCchH--HHHHHHHHHhCCCcEEEEECC
Confidence 45776653 33433 246789999999999998864
No 426
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=27.52 E-value=55 Score=29.20 Aligned_cols=36 Identities=14% Similarity=0.090 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCCCCHHH-HHHHHHHHHhCCCeEEEEe
Q 012587 6 HVHVAILPLPAVGHVNS-MLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p-~l~La~~L~~rGH~Vt~~~ 41 (460)
|+||+++..|..++... .-.+.+.|.++|++|.+..
T Consensus 5 mkki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~ 41 (292)
T 2an1_A 5 FKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQ 41 (292)
T ss_dssp CCEEEEECC-------CHHHHHHHHHHHTTCEEEEEH
T ss_pred CcEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEec
Confidence 67999999987666554 5568899999999988753
No 427
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=27.47 E-value=2.5e+02 Score=22.74 Aligned_cols=139 Identities=12% Similarity=0.101 Sum_probs=75.4
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhccccc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 346 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~ 346 (460)
+|.|-|-+||.+ +....+.....++.+|.++-+.+- ..+.+|+.+.+.. ... --..++
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~--------SaHR~p~~~~~~~----------~~a-~~~g~~- 63 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHIL--------SAHRTPKETVEFV----------ENA-DNRGCA- 63 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHHHHH----------HHH-HHTTEE-
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEE--------cccCCHHHHHHHH----------HHH-HhCCCc-
Confidence 456777777775 667788899999999988755552 1224555433211 000 001223
Q ss_pred ccccccCCh----hHHHHHHHhCCceecccccccch-hhHHHHH-hh--hceeeeec--C---CcchHHHHHHHHHHHhH
Q 012587 347 GGFLTHCGW----NSTLESIVAGMPMICWPSFADQQ-INSRFVG-EV--WKLGLDIK--D---LCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 347 ~~~I~HGG~----gs~~eal~~GvP~l~~P~~~DQ~-~na~~~~-e~--~G~g~~~~--~---~~~~~~l~~~i~~~l~~ 413 (460)
++|.=+|. .++..++ .-+|++.+|...... .....+. -+ -|+.+..- . ..++.-+...|..+ .|
T Consensus 64 -ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~d 140 (169)
T 3trh_A 64 -VFIAAAGLAAHLAGTIAAH-TLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIAL-QD 140 (169)
T ss_dssp -EEEEEECSSCCHHHHHHHT-CSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHT-TC
T ss_pred -EEEEECChhhhhHHHHHhc-CCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcC-CC
Confidence 37766664 3444443 368999999853211 1222221 01 24432221 1 23444444433333 25
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 012587 414 RKEEFMESADRMANLAKKS 432 (460)
Q Consensus 414 ~~~~~~~~a~~l~~~~~~~ 432 (460)
+.++++.+..++++++.
T Consensus 141 --~~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 141 --KSIAQKLVQQRTAKRET 157 (169)
T ss_dssp --HHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 88999999998888875
No 428
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=27.46 E-value=68 Score=25.46 Aligned_cols=35 Identities=11% Similarity=-0.057 Sum_probs=22.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||||++.+=.+.=.+- -.|.+.|.++||+|.=+++
T Consensus 1 ~MkIaigsDhaG~~lK--~~i~~~L~~~G~eV~D~G~ 35 (149)
T 2vvr_A 1 MKKIAFGCDHVGFILK--HEIVAHLVERGVEVIDKGT 35 (149)
T ss_dssp CCEEEEEECTTGGGGH--HHHHHHHHHTTCEEEECCC
T ss_pred CcEEEEEeCchhHHHH--HHHHHHHHHCCCEEEEeCC
Confidence 4688777644321222 2377888889999887765
No 429
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=27.45 E-value=21 Score=33.73 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHh-CCCeEEEEe
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGH-AGIKITFLN 41 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~-rGH~Vt~~~ 41 (460)
||||+|+-.|..|. .+|..|++ .||+|+++.
T Consensus 2 ~mkI~ViGaG~~G~-----~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAH-----TLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHH-----HHHHHHHhCCCCEEEEEe
Confidence 47999998887775 56888988 499999997
No 430
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=27.33 E-value=68 Score=28.11 Aligned_cols=41 Identities=10% Similarity=0.029 Sum_probs=31.5
Q ss_pred HHHHHHHHcCCCCccEEEEcCCcc------hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSDSKSPVNCIITDGYMS------RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~~~~~pD~vv~D~~~~------~~~~~A~~lgiP~v~~~~~ 141 (460)
..+.+++++. +||+|++..... .+..+|+.||+|.++..+.
T Consensus 106 ~~La~~i~~~--~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 106 RVLAKLAEKE--KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 4455566664 899999876653 5899999999999997654
No 431
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=27.27 E-value=83 Score=28.40 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=24.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+++++.++.| =-.+|++.|.++|++|.++..
T Consensus 9 k~vlVTGas~g---IG~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 9 RTAFVTGGANG---VGIGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp CEEEEETTTST---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEcCCchH---HHHHHHHHHHHCCCEEEEEEC
Confidence 67777777644 245789999999999988775
No 432
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=27.27 E-value=62 Score=26.12 Aligned_cols=37 Identities=16% Similarity=0.350 Sum_probs=27.1
Q ss_pred EEEEEcCCCC---CCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 8 HVAILPLPAV---GHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 8 ~il~~~~~~~---Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+|+|+|.=+. ---++...|++.|.++|.+|.|..+|-
T Consensus 25 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 25 KVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp EEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 6777664211 123578899999999999999999843
No 433
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=27.22 E-value=3.3e+02 Score=24.14 Aligned_cols=105 Identities=9% Similarity=0.050 Sum_probs=54.5
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhC-CCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhc--c
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLA--H 343 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~--~ 343 (460)
-.+.+|..|.+.. .++.++.+. +.+++.+... .++.. ++..+. +..+-...+++. .
T Consensus 11 ~~igiIG~G~~g~-------~~~~~l~~~~~~~~v~v~d~-----------~~~~~-~~~~~~--~~~~~~~~~~l~~~~ 69 (315)
T 3c1a_A 11 VRLALIGAGRWGK-------NYIRTIAGLPGAALVRLASS-----------NPDNL-ALVPPG--CVIESDWRSVVSAPE 69 (315)
T ss_dssp EEEEEEECTTTTT-------THHHHHHHCTTEEEEEEEES-----------CHHHH-TTCCTT--CEEESSTHHHHTCTT
T ss_pred ceEEEECCcHHHH-------HHHHHHHhCCCcEEEEEEeC-----------CHHHH-HHHHhh--CcccCCHHHHhhCCC
Confidence 4678899998873 244555554 4555544431 11111 111122 223445677775 4
Q ss_pred cccccccccCC----hhHHHHHHHhCCceecc-cccc--cchhhHHHHHhhhceeeee
Q 012587 344 SAVGGFLTHCG----WNSTLESIVAGMPMICW-PSFA--DQQINSRFVGEVWKLGLDI 394 (460)
Q Consensus 344 ~~~~~~I~HGG----~gs~~eal~~GvP~l~~-P~~~--DQ~~na~~~~e~~G~g~~~ 394 (460)
+++ ++.--. .-.+.+|+.+|+++++= |... ++..--..++++.|+-+.+
T Consensus 70 ~D~--V~i~tp~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 125 (315)
T 3c1a_A 70 VEA--VIIATPPATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWV 125 (315)
T ss_dssp CCE--EEEESCGGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred CCE--EEEeCChHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 554 443222 24567789999998875 7643 3332233333556765555
No 434
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=27.19 E-value=73 Score=27.37 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=24.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||+++++.++.| =-.++++.|.++|++|.++..
T Consensus 1 mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCATG---IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666666532 245789999999999998764
No 435
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=27.09 E-value=68 Score=28.06 Aligned_cols=41 Identities=15% Similarity=0.082 Sum_probs=31.4
Q ss_pred HHHHHHHHcCCCCccEEEEcCCcc------hHHHHHHHhCCceEEEecc
Q 012587 99 PLLKEMVSDSKSPVNCIITDGYMS------RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 99 ~~l~~~~~~~~~~pD~vv~D~~~~------~~~~~A~~lgiP~v~~~~~ 141 (460)
..+.+++++. +||+|++..... .+..+|+.||+|.++..+.
T Consensus 103 ~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 103 KILAAVARAE--GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HHHHHHHHHH--TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 4445556664 899999876553 5899999999999997654
No 436
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=27.08 E-value=56 Score=32.28 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=31.0
Q ss_pred CCCcEEEEEcCCCCCC---HHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 4 QDHVHVAILPLPAVGH---VNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh---~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
.+|+|.++++.|+.++ -.-.-+|++.|++||++|+.+=..
T Consensus 9 ~~~~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~ 51 (550)
T 1vco_A 9 PRPRKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKID 51 (550)
T ss_dssp -CCCEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred ccceeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecc
Confidence 4567888888665444 456779999999999999998763
No 437
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=27.08 E-value=36 Score=33.40 Aligned_cols=35 Identities=3% Similarity=0.089 Sum_probs=27.7
Q ss_pred HHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEe
Q 012587 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFR 139 (460)
Q Consensus 100 ~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~ 139 (460)
.+.+++++. +||++|.+.. ...+|+++|||++.+.
T Consensus 363 el~~~i~~~--~pDl~ig~~~---~r~~a~k~gip~~~i~ 397 (511)
T 2xdq_B 363 VVGDAIARV--EPAAIFGTQM---ERHVGKRLNIPCGVIA 397 (511)
T ss_dssp HHHHHHHHH--CCSEEEECHH---HHHHHHHHTCCEEECS
T ss_pred HHHHHHHhc--CCCEEEeccc---hHHHHHhcCCCeEecc
Confidence 456667776 9999998743 7788999999999854
No 438
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=27.06 E-value=76 Score=27.90 Aligned_cols=34 Identities=9% Similarity=0.147 Sum_probs=25.6
Q ss_pred EEEEEcCCC--CCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 8 HVAILPLPA--VGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 8 ~il~~~~~~--~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
|+++++.++ .| -=.++|+.|.++|++|.++....
T Consensus 27 k~vlVTGasg~~G---IG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 27 KKILITGLLSNKS---IAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CEEEECCCCSTTC---HHHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCCCCC---HHHHHHHHHHHcCCEEEEeeCch
Confidence 677888754 22 13678999999999999987644
No 439
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X*
Probab=27.06 E-value=3.4 Score=37.88 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=25.8
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeE--EEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKI--TFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~V--t~~~~ 42 (460)
|.+.+||||+++...- ++ -+ .++++|.++||+| .++..
T Consensus 6 ~~~~~~m~i~il~~~~--~~-s~-~l~~al~~~G~~v~~~~~d~ 45 (324)
T 1z2n_X 6 MTTKQTVSLFIWLPES--KQ-KT-LFISTKNHTQFELNNIIFDV 45 (324)
T ss_dssp ----CEEEEEEECCHH--HH-HH-HBSSCCSEEEEEETTEEEEE
T ss_pred cccCCcEEEEEEEchh--hh-hh-hHHHHHHhcCcEEEEEEecC
Confidence 5566789999998532 22 22 8889999999999 77765
No 440
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=27.03 E-value=17 Score=32.89 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
++.+|+++-.|.-| +..|..|+++|++|+++-..
T Consensus 6 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 6 KVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred ccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcC
Confidence 34588888777544 68889999999999999763
No 441
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.01 E-value=1.8e+02 Score=26.29 Aligned_cols=82 Identities=12% Similarity=-0.113 Sum_probs=0.0
Q ss_pred CCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccc
Q 012587 266 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 345 (460)
Q Consensus 266 ~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~ 345 (460)
.+-.|+++..|... ..+..+...+++.+..+.+... .-+....+.. ...+...++
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t-----------~~~~~~~~~~-----------~~~~~~~~d 84 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVT-----------WEKGDAARYV-----------EEARKFGVA 84 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEEC-----------CSTTHHHHHH-----------HHHHHHTCS
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEe-----------cCcchHHHHH-----------HHHHhcCCC
Q ss_pred cccccccCChhHHHHHH--------HhCCceeccccc
Q 012587 346 VGGFLTHCGWNSTLESI--------VAGMPMICWPSF 374 (460)
Q Consensus 346 ~~~~I~HGG~gs~~eal--------~~GvP~l~~P~~ 374 (460)
+ +|.-||=||+.|++ ..++|+.++|..
T Consensus 85 ~--vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 85 T--VIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp E--EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred E--EEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
No 442
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=26.97 E-value=22 Score=32.43 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCC----CeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAG----IKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rG----H~Vt~~~~ 42 (460)
|++|||+|+-.|..|. .+|..|.+.| |+|+++..
T Consensus 20 ~~~mkI~iIG~G~mG~-----ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAF-----ALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp --CCCEEEESCSHHHH-----HHHHHHHHTTSSCGGGEEEECS
T ss_pred cCCCEEEEECCCHHHH-----HHHHHHHHCCCCCcceEEEECC
Confidence 5568999998877664 6788899999 99998865
No 443
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=26.92 E-value=38 Score=28.46 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=22.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||++.- +-|-+ =..|++.|.++||+|+.++.
T Consensus 1 M~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVG--STGRV--GKSLLKSLSTTDYQIYAGAR 32 (219)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHTTSSCEEEEEES
T ss_pred CeEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 4766553 22322 25889999999999999986
No 444
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=26.80 E-value=26 Score=31.81 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=24.0
Q ss_pred hhcccccccccccCChhHHHHHHHh----CCceecccc
Q 012587 340 VLAHSAVGGFLTHCGWNSTLESIVA----GMPMICWPS 373 (460)
Q Consensus 340 il~~~~~~~~I~HGG~gs~~eal~~----GvP~l~~P~ 373 (460)
....+++ +|.-||=||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3445676 9999999999999865 889988874
No 445
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=26.70 E-value=64 Score=26.14 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=27.2
Q ss_pred EEEEEcCCC--CC-CHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 8 HVAILPLPA--VG-HVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 8 ~il~~~~~~--~G-h~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+|+|+|.=+ -. --++...|++.|.++|.+|.|..+|-
T Consensus 24 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 24 SIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp EEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 677766421 11 23578899999999999999999844
No 446
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=26.58 E-value=1e+02 Score=29.46 Aligned_cols=38 Identities=16% Similarity=0.330 Sum_probs=31.5
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCccc
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY 45 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (460)
-|+++-.++-|-..-+..||..|+.+|++|.+++.+.+
T Consensus 99 vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~ 136 (433)
T 3kl4_A 99 IIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVY 136 (433)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 44555556899999999999999999999999986544
No 447
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=26.55 E-value=1.8e+02 Score=32.08 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=25.7
Q ss_pred CCCc-EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 4 QDHV-HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 4 ~~~~-~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
++|+ ||+|+..+. -.+.+++++++.|+++..+....
T Consensus 28 ~~m~kkILI~grGe-----ia~~iiraar~lGi~vVaV~s~~ 64 (1236)
T 3va7_A 28 KKPFETVLIANRGE-----IAVRIMKTLKRMGIKSVAVYSDP 64 (1236)
T ss_dssp CCSCSEEEECCCHH-----HHHHHHHHHHHHTCEEEEEECSG
T ss_pred cCCCCEEEEEcCCH-----HHHHHHHHHHHCCCEEEEEEcCC
Confidence 4454 677765442 26899999999999988876544
No 448
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=26.54 E-value=38 Score=33.42 Aligned_cols=34 Identities=9% Similarity=0.194 Sum_probs=26.8
Q ss_pred HHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEE
Q 012587 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (460)
Q Consensus 100 ~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~ 138 (460)
.+.+++++. +||++|.+. ....+|+++|||++.+
T Consensus 340 el~~~i~~~--~pDL~ig~~---~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 340 EVEKAIEAA--APELILGTQ---MERNIAKKLGLPCAVI 373 (525)
T ss_dssp HHHHHHHHH--CCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred HHHHHHhhc--CCCEEEecc---hhHHHHHHcCCCEEEe
Confidence 445666665 999999884 3778899999999984
No 449
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=26.49 E-value=1.4e+02 Score=27.42 Aligned_cols=27 Identities=7% Similarity=-0.091 Sum_probs=19.6
Q ss_pred cccccccccc--CChhHHHHHHHhCCceecc
Q 012587 343 HSAVGGFLTH--CGWNSTLESIVAGMPMICW 371 (460)
Q Consensus 343 ~~~~~~~I~H--GG~gs~~eal~~GvP~l~~ 371 (460)
++++ +|+| .+.....-|-..|+|.+.+
T Consensus 102 ~pD~--Vi~d~~~~~~~~~aA~~~giP~v~~ 130 (402)
T 3ia7_A 102 PPDL--VVYDVFPFIAGRLLAARWDRPAVRL 130 (402)
T ss_dssp CCSE--EEEESTTHHHHHHHHHHHTCCEEEE
T ss_pred CCCE--EEECchHHHHHHHHHHhhCCCEEEE
Confidence 5666 7766 5555666778899998876
No 450
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=26.45 E-value=95 Score=22.27 Aligned_cols=32 Identities=16% Similarity=0.057 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+|+++|..+ ......+..|.+.|++|.++.+
T Consensus 57 ~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 57 EIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp SEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 4788888644 3567789999999999887754
No 451
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=26.43 E-value=45 Score=32.21 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=26.8
Q ss_pred EEEcCCC------CCCHHHHH---HHHHHHHhCCCeEEEEeC
Q 012587 10 AILPLPA------VGHVNSML---NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 10 l~~~~~~------~Gh~~p~l---~La~~L~~rGH~Vt~~~~ 42 (460)
+++|.|+ .||+.+++ .|++.|+.+||+|+++.+
T Consensus 25 ~yv~gPt~y~~~HiGHar~~v~~D~l~R~lr~~G~~V~~v~~ 66 (461)
T 1li5_A 25 MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRN 66 (461)
T ss_dssp EEECCCBSSSCCBHHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EEEcCCcCCCCCcccccHHHHHHHHHHHHHHHcCCCEEEeec
Confidence 6667776 69998876 578888889999999975
No 452
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=26.42 E-value=60 Score=25.17 Aligned_cols=36 Identities=17% Similarity=0.193 Sum_probs=25.4
Q ss_pred cEEEEEcCCCCCCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l-~La~~L~~rGH~Vt~~~~ 42 (460)
|||+++-....|+..-+. .|++.|.++|++|.++.-
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 477777666678766544 456677778999988754
No 453
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=26.42 E-value=3.3e+02 Score=23.92 Aligned_cols=85 Identities=16% Similarity=0.189 Sum_probs=52.8
Q ss_pred CcEEEEEcCCCCCCHHHH--HHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCC
Q 012587 6 HVHVAILPLPAVGHVNSM--LNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~--l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (460)
..+|+++.......++.. -.+-+++.++|+++.++.+....+.
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~----------------------------------- 47 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYADDDIPN----------------------------------- 47 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTCEEEEEECTTCHHH-----------------------------------
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCCEEEEeeCCCCHHH-----------------------------------
Confidence 457877776554444442 2466778888999888764221000
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCCcc----hHHHHHHHhCCceEEEecc
Q 012587 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS----RAIDAAREVGVSIIYFRTI 141 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~~~----~~~~~A~~lgiP~v~~~~~ 141 (460)
....++.++.. ++|.||...... .....+...|||+|.+...
T Consensus 48 -------------~~~~i~~~~~~---~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~ 93 (330)
T 3uug_A 48 -------------QLSQIENMVTK---GVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRL 93 (330)
T ss_dssp -------------HHHHHHHHHHH---TCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSC
T ss_pred -------------HHHHHHHHHHc---CCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCC
Confidence 11344555555 899999876543 2355567789999998654
No 454
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=26.39 E-value=1.2e+02 Score=22.55 Aligned_cols=48 Identities=10% Similarity=-0.011 Sum_probs=34.4
Q ss_pred hCCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhH
Q 012587 364 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 413 (460)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~ 413 (460)
..+|++++-...+.. ....+. +.|+--.+.+.++.++|.++|+++++.
T Consensus 78 ~~~~ii~~s~~~~~~-~~~~~~-~~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 78 AKPYVIVISAFSEMK-YFIKAI-ELGVHLFLPKPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp CCCEEEECCCCCCHH-HHHHHH-HHCCSEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcChH-HHHHHH-hCCcceeEcCCCCHHHHHHHHHHHHHH
Confidence 367777776554433 333442 568877777889999999999999984
No 455
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=26.38 E-value=85 Score=29.04 Aligned_cols=41 Identities=10% Similarity=0.236 Sum_probs=23.6
Q ss_pred CCCCCcEEEEEcCCCCC--CHHHHHHHHHHHHhC-CCeEEEEeC
Q 012587 2 EKQDHVHVAILPLPAVG--HVNSMLNLAELLGHA-GIKITFLNT 42 (460)
Q Consensus 2 ~~~~~~~il~~~~~~~G--h~~p~l~La~~L~~r-GH~Vt~~~~ 42 (460)
.+|++.||+|+-.|..| |+..+..+...+... +.+|+-++.
T Consensus 21 ~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d 64 (393)
T 4fb5_A 21 QSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAE 64 (393)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEEC
T ss_pred cCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEEC
Confidence 35777899999988666 333333444444332 567777765
No 456
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=26.37 E-value=75 Score=27.64 Aligned_cols=33 Identities=30% Similarity=0.305 Sum_probs=26.1
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.|+++++.++.| -=.++|+.|.++|++|.++..
T Consensus 8 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 8 EAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 378888887754 346889999999999988864
No 457
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=26.21 E-value=19 Score=33.23 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCC-------CeEEEEeCc
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAG-------IKITFLNTE 43 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rG-------H~Vt~~~~~ 43 (460)
|.+|||+|+-.|..|. .+|..|+++| |+|+++...
T Consensus 6 m~~mkI~iIG~G~mG~-----~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGS-----AIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp -CCEEEEEECCSHHHH-----HHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred cCCCeEEEECCCHHHH-----HHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 4567999998877765 5688888889 999999753
No 458
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=26.19 E-value=24 Score=31.08 Aligned_cols=52 Identities=13% Similarity=0.183 Sum_probs=35.5
Q ss_pred ccccccccccCChhHHHHHHHh---CCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 343 HSAVGGFLTHCGWNSTLESIVA---GMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 343 ~~~~~~~I~HGG~gs~~eal~~---GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
.+++ +|+=||=||+++++.. ++|++.++.. .+|. . ..++++++.++++++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G------------~~Gf--l--~~~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG------------RLGF--L--TSYTLDEIDRFLEDLRN 95 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS------------SCCS--S--CCBCGGGHHHHHHHHHT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC------------CCCc--c--CcCCHHHHHHHHHHHHc
Confidence 4565 9999999999999987 7888888632 1111 1 12456667777777765
No 459
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=26.18 E-value=65 Score=28.22 Aligned_cols=40 Identities=13% Similarity=0.075 Sum_probs=26.2
Q ss_pred CCCCCCcEEEEEcCCCC-CCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 1 MEKQDHVHVAILPLPAV-GHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~-Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
|..++. |+++++.++. |-+ -.++++.|.++|++|.++...
T Consensus 1 M~~l~~-k~vlVTGas~~~gI--G~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 1 MGFLKG-KKGLIVGVANNKSI--AYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp -CTTTT-CEEEEECCCSTTSH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCCC-CEEEEECCCCCCcH--HHHHHHHHHHCCCEEEEEeCC
Confidence 444333 5666666541 222 357899999999999998753
No 460
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=26.16 E-value=59 Score=28.14 Aligned_cols=33 Identities=18% Similarity=0.060 Sum_probs=24.5
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
||+++++.++.|= -.++++.|.++|++|.++..
T Consensus 1 Mk~vlVTGas~gI---G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHFG---GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTSTT---HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCchH---HHHHHHHHHHCCCEEEEEeC
Confidence 4677777766442 35789999999999988764
No 461
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=26.14 E-value=34 Score=33.21 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.++||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 4 ~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 4 AQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp TTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 35799999887776 4578899999999998864
No 462
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=26.11 E-value=90 Score=28.09 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
++|||++. |+.|.+ -..|++.|.++||+|+.++.
T Consensus 12 ~~M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 45 (342)
T 2x4g_A 12 AHVKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHR 45 (342)
T ss_dssp CCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEec
Confidence 45687665 333433 35778999999999999885
No 463
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=26.11 E-value=1.7e+02 Score=24.96 Aligned_cols=46 Identities=9% Similarity=-0.016 Sum_probs=32.2
Q ss_pred chhhhhhhhcCCCCcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEE
Q 012587 254 DRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLW 301 (460)
Q Consensus 254 ~~~l~~~l~~~~~~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~ 301 (460)
.+.+.+|+. ..+.+++|..++...........+.++++++|+.+..
T Consensus 21 ~~~l~~~~~--~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 21 LPLIANQLN--GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHHT--TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHhc--CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 344667775 3578999998875433445677788999999976543
No 464
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=26.03 E-value=45 Score=27.90 Aligned_cols=31 Identities=6% Similarity=0.051 Sum_probs=25.3
Q ss_pred ccccccccccCChhHHHHHHHhCCceeccccccc
Q 012587 343 HSAVGGFLTHCGWNSTLESIVAGMPMICWPSFAD 376 (460)
Q Consensus 343 ~~~~~~~I~HGG~gs~~eal~~GvP~l~~P~~~D 376 (460)
.+++ +|+.||.+.....- .++|+|-++..+-
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~~ 81 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTRF 81 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCHH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCHh
Confidence 3455 99999999988875 6899999998753
No 465
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=25.88 E-value=84 Score=26.87 Aligned_cols=32 Identities=13% Similarity=0.284 Sum_probs=24.0
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|.++++.++.| --.++++.|.++|++|.++..
T Consensus 12 k~vlITGasgg---iG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 12 ACAAVTGAGSG---IGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56667665532 245889999999999999875
No 466
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=25.88 E-value=37 Score=30.45 Aligned_cols=44 Identities=7% Similarity=0.069 Sum_probs=31.3
Q ss_pred CcEEEEEcCCCCCC----HHHHHHHHHHHHhCCCeEEEEeCccchhHH
Q 012587 6 HVHVAILPLPAVGH----VNSMLNLAELLGHAGIKITFLNTEHYYDRV 49 (460)
Q Consensus 6 ~~~il~~~~~~~Gh----~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~ 49 (460)
+|||+++..|...- ..-...++++|.++||+|..+........+
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~ 50 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLI 50 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHH
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHH
Confidence 57999998763221 344668899999999999999874333333
No 467
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=25.84 E-value=27 Score=28.19 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=22.7
Q ss_pred CCcEEEEEcCCCCCCH-HHHH-HHHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAVGHV-NSML-NLAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~-~p~l-~La~~L~~rGH~Vt~~~~ 42 (460)
.||||++.+ -|. +.+. .|.+.|.++||+|+=+++
T Consensus 2 ~~MkIaigs----DhaG~~lK~~i~~~L~~~G~eV~D~G~ 37 (162)
T 2vvp_A 2 SGMRVYLGA----DHAGYELKQRIIEHLKQTGHEPIDCGA 37 (162)
T ss_dssp -CCEEEEEE----CHHHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred CCCEEEEEe----CchhHHHHHHHHHHHHHCCCEEEEeCC
Confidence 457887765 343 3333 467788889999987765
No 468
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=25.81 E-value=40 Score=31.81 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=27.4
Q ss_pred CCCCCCcEEEEEcCCCCCCHHHHHHHHHHHHhCC-CeEEEEeC
Q 012587 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNT 42 (460)
Q Consensus 1 ~~~~~~~~il~~~~~~~Gh~~p~l~La~~L~~rG-H~Vt~~~~ 42 (460)
|.+++.++|+|+-.|- -=+..|..|+++| ++|+++=.
T Consensus 1 M~~~~~~~v~IIGaG~-----aGl~aA~~L~~~g~~~v~v~E~ 38 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGP-----AGLAAGMYLEQAGFHDYTILER 38 (424)
T ss_dssp -CCCTTCCEEEECCSH-----HHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCCCCCCEEEECcCH-----HHHHHHHHHHhCCCCcEEEEEC
Confidence 5544567898887664 3477899999999 99999843
No 469
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=25.70 E-value=42 Score=29.61 Aligned_cols=32 Identities=25% Similarity=0.292 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCC--eEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGI--KITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH--~Vt~~~~ 42 (460)
|+||+|+-.|..|. .+++.|++.|| +|+++..
T Consensus 1 m~~I~iIG~G~mG~-----~~a~~l~~~g~~~~V~~~d~ 34 (281)
T 2g5c_A 1 MQNVLIVGVGFMGG-----SFAKSLRRSGFKGKIYGYDI 34 (281)
T ss_dssp CCEEEEESCSHHHH-----HHHHHHHHTTCCSEEEEECS
T ss_pred CcEEEEEecCHHHH-----HHHHHHHhcCCCcEEEEEeC
Confidence 56999998877774 57888999999 8887654
No 470
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=25.65 E-value=78 Score=28.80 Aligned_cols=45 Identities=11% Similarity=0.132 Sum_probs=35.0
Q ss_pred cEEEEEcC-CCCCCHHHHHHHHHHHHhCCCeEEEEeCccchhHHhhc
Q 012587 7 VHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (460)
Q Consensus 7 ~~il~~~~-~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (460)
.+|+|++. |+-|--.-...||..|+++|++|.++..+.. ..+...
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~-~~l~~~ 64 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA-HNLSDA 64 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT-CHHHHH
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC-cCHHHH
Confidence 45655544 7999999999999999999999999987543 444443
No 471
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=25.65 E-value=3.1e+02 Score=24.41 Aligned_cols=61 Identities=18% Similarity=0.212 Sum_probs=33.2
Q ss_pred cChHhhhcccccccccccCC----hhHHHHHHHhCCceecc-cccc--cchhhHHHHHhhhceeeeec
Q 012587 335 VPQEEVLAHSAVGGFLTHCG----WNSTLESIVAGMPMICW-PSFA--DQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 335 vp~~~il~~~~~~~~I~HGG----~gs~~eal~~GvP~l~~-P~~~--DQ~~na~~~~e~~G~g~~~~ 395 (460)
-...+++...++.+++.--. ...+.+|+.+|+++++- |... ++..--..++++.|+-..+.
T Consensus 52 ~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~ 119 (332)
T 2glx_A 52 TSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTN 119 (332)
T ss_dssp SCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 34567776432223443332 24567889999998874 6543 33222223334567666554
No 472
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=25.63 E-value=2e+02 Score=26.36 Aligned_cols=35 Identities=17% Similarity=0.012 Sum_probs=25.9
Q ss_pred CCccEEEEcCCcc---hHHHHHHHhCCceEEEecchhH
Q 012587 110 SPVNCIITDGYMS---RAIDAAREVGVSIIYFRTISAC 144 (460)
Q Consensus 110 ~~pD~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~~~ 144 (460)
.+.|+||.=.-.. .+-.+|...|+|+|.+-|+...
T Consensus 87 ~~~d~IIavGGGsv~D~aK~vA~~~~~p~i~IPTT~~t 124 (354)
T 3ce9_A 87 AEVDALIGIGGGKAIDAVKYMAFLRKLPFISVPTSTSN 124 (354)
T ss_dssp TTCCEEEEEESHHHHHHHHHHHHHHTCCEEEEESCCSS
T ss_pred cCCCEEEEECChHHHHHHHHHHhhcCCCEEEecCcccC
Confidence 4899999543322 5777778889999999887653
No 473
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=25.62 E-value=3.2e+02 Score=23.46 Aligned_cols=39 Identities=3% Similarity=-0.098 Sum_probs=22.5
Q ss_pred CCCcEEEEEcCCCCCCHHH--HHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNS--MLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p--~l~La~~L~~rGH~Vt~~~~ 42 (460)
.+..+|+++.......++. .-.+-+++.++|+++.++..
T Consensus 6 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 46 (293)
T 3l6u_A 6 PKRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVATS 46 (293)
T ss_dssp ---CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCCEEEEECC
Confidence 3445787776554333332 23456677778998888765
No 474
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=25.61 E-value=96 Score=28.34 Aligned_cols=72 Identities=6% Similarity=0.068 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHH
Q 012587 281 SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLE 360 (460)
Q Consensus 281 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~e 360 (460)
+....+.+.+++.....+.||.+.++. +-.++.+++....|-+++.. ||-+.-..+++-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-------------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 121 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGY-------------------NSNGLLKYLDYDLIRENPKF--FCGYSDITALNN 121 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-------------------CGGGGGGGCCHHHHHTSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-------------------cHHHHHhhcChhHHHhCCeE--EEEecchHHHHH
Confidence 345677788999888888899886431 22345566666666666765 888888888887
Q ss_pred HHH--hCCceecccc
Q 012587 361 SIV--AGMPMICWPS 373 (460)
Q Consensus 361 al~--~GvP~l~~P~ 373 (460)
+++ .|+..+-=|.
T Consensus 122 al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 122 AIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhhCCcEEEccc
Confidence 776 4777655444
No 475
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=25.52 E-value=63 Score=29.47 Aligned_cols=35 Identities=23% Similarity=0.110 Sum_probs=24.6
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
++||+|++. |+.|-+ -..|++.|.++||+|+.++.
T Consensus 25 ~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 25 AQPKVWLIT--GVAGFI--GSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp HSCCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCeEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 345677665 333433 35788999999999999875
No 476
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=25.42 E-value=2.1e+02 Score=25.47 Aligned_cols=115 Identities=8% Similarity=0.028 Sum_probs=69.4
Q ss_pred HHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhC
Q 012587 286 IEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAG 365 (460)
Q Consensus 286 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~G 365 (460)
..+.+.++..+.++++.. +.-..+|+.+.+..+..++=. |+++ .=...|...+..|+.+|
T Consensus 161 ~~~~~~l~~~~~Dlivla--------~y~~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~G 220 (292)
T 3lou_A 161 AQWLDVFETSGAELVILA--------RYMQVLSPEASARLANRAINI----------HHSF--LPGFKGAKPYHQAHARG 220 (292)
T ss_dssp HHHHHHHHHHTCSEEEES--------SCCSCCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEec--------CchhhCCHHHHhhhcCCeEEe----------CCCc--CcCCCCccHHHHHHHcC
Confidence 457777777788887777 333467777766544333311 2222 22345889999999999
Q ss_pred Cceecccccc--cchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 012587 366 MPMICWPSFA--DQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMA 426 (460)
Q Consensus 366 vP~l~~P~~~--DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~ 426 (460)
+....+-.+. +..+-+..+. .--+.+...-|.++|.+.+..+-. .-|.+..+.+.
T Consensus 221 ~~~~G~Tvh~v~~~lD~G~Ii~---Q~~v~i~~~dt~~~L~~r~~~~e~---~~l~~av~~~~ 277 (292)
T 3lou_A 221 VKLIGATAHFVTDDLDEGPIIE---QVVERVDHSYRPEQLLAVGRDVEC---ITLARAVKAFI 277 (292)
T ss_dssp CSEEEEEEEECCSSTTCSCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCcCCCEEE---EEEEEcCCCCCHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 9987776542 4444444442 223334346788888877776543 45666655543
No 477
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=25.42 E-value=97 Score=17.41 Aligned_cols=28 Identities=18% Similarity=0.277 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHh-HhHHHHHHHHHHHHHHHH
Q 012587 401 NIVEKAVNDLMV-ERKEEFMESADRMANLAK 430 (460)
Q Consensus 401 ~~l~~~i~~~l~-~~~~~~~~~a~~l~~~~~ 430 (460)
++|...|.++++ + ..+...+.++++.+.
T Consensus 4 nQLEdkVEeLl~~~--~~Le~eV~RL~~ll~ 32 (34)
T 2hy6_A 4 KQLADAVEELASAN--YHLANAVARLAKAVG 32 (34)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhh--HHHHHHHHHHHHHhc
Confidence 578888888888 5 677777777776643
No 478
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=25.41 E-value=85 Score=27.21 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=25.0
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+++++.++.| -=.++++.|.++|++|.++..
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 67777777643 346789999999999988865
No 479
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=25.37 E-value=3.9e+02 Score=24.34 Aligned_cols=109 Identities=12% Similarity=0.036 Sum_probs=61.0
Q ss_pred CcEEEEEecCcccCCHHHHHHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchH---HHHHhcCCceeeeecChHhhhcc
Q 012587 267 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEE---LLEATKERGCIAGWVPQEEVLAH 343 (460)
Q Consensus 267 ~~~V~vs~GS~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~n~~~~~~vp~~~il~~ 343 (460)
-.+.+|..|.+.. ..++.++...+.+++.+... .++. +.++.+ ...-+-...++|..
T Consensus 27 irvgiiG~G~~~~------~~~~~~~~~~~~~lvav~d~-----------~~~~a~~~a~~~~---~~~~~~~~~~ll~~ 86 (361)
T 3u3x_A 27 LRFAAVGLNHNHI------YGQVNCLLRAGARLAGFHEK-----------DDALAAEFSAVYA---DARRIATAEEILED 86 (361)
T ss_dssp CEEEEECCCSTTH------HHHHHHHHHTTCEEEEEECS-----------CHHHHHHHHHHSS---SCCEESCHHHHHTC
T ss_pred cEEEEECcCHHHH------HHHHHHhhcCCcEEEEEEcC-----------CHHHHHHHHHHcC---CCcccCCHHHHhcC
Confidence 4678888886531 12344444567777666631 1221 111111 12235567888987
Q ss_pred cccccccccCCh----hHHHHHHHhCCceec-ccccc--cchhhHHHHHhhhceeeeec
Q 012587 344 SAVGGFLTHCGW----NSTLESIVAGMPMIC-WPSFA--DQQINSRFVGEVWKLGLDIK 395 (460)
Q Consensus 344 ~~~~~~I~HGG~----gs~~eal~~GvP~l~-~P~~~--DQ~~na~~~~e~~G~g~~~~ 395 (460)
+++.+++--.-. .-+.+||.+|+++++ -|+.. ++..-...++++.|+-+.+.
T Consensus 87 ~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~ 145 (361)
T 3u3x_A 87 ENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQAETGRIFSIL 145 (361)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 666556654433 347889999999988 57643 34333333335666655553
No 480
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=25.35 E-value=83 Score=23.09 Aligned_cols=46 Identities=9% Similarity=0.089 Sum_probs=33.6
Q ss_pred CCceecccccccchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHh
Q 012587 365 GMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 412 (460)
Q Consensus 365 GvP~l~~P~~~DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~ 412 (460)
.+|++++-...+. ....+. -+.|+--.+.+.++.++|..+++++++
T Consensus 76 ~~pii~~s~~~~~-~~~~~~-~~~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 76 RIPVIVLTAKGGE-EDESLA-LSLGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TSCEEEEESCCSH-HHHHHH-HHTTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred CCCEEEEecCCch-HHHHHH-HhcChhhhccCCCCHHHHHHHHHHHhc
Confidence 5788877654443 344445 257887777789999999999999875
No 481
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=25.26 E-value=81 Score=28.05 Aligned_cols=38 Identities=16% Similarity=0.158 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCC--CCHHHHHH-HHHHHHhCCCeEEEEeC
Q 012587 5 DHVHVAILPLPAV--GHVNSMLN-LAELLGHAGIKITFLNT 42 (460)
Q Consensus 5 ~~~~il~~~~~~~--Gh~~p~l~-La~~L~~rGH~Vt~~~~ 42 (460)
.||||+++....+ |.-.-++. +++.|.+.|++|.++--
T Consensus 57 ~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~eveiidL 97 (279)
T 2fzv_A 57 PPVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDP 97 (279)
T ss_dssp SCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCC
T ss_pred CCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCEEEEEeh
Confidence 4689988887654 55444444 56677778999988754
No 482
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=25.24 E-value=97 Score=25.85 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=27.1
Q ss_pred CCCcEEEEEcCCC---C----CCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 4 QDHVHVAILPLPA---V----GHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 4 ~~~~~il~~~~~~---~----Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
++|.+|.+++... . -...-...|++.|+++|+.|..-+
T Consensus 21 ~~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg 65 (195)
T 1rcu_A 21 GHMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNGG 65 (195)
T ss_dssp --CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 3455898888642 2 345668899999999999888743
No 483
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=25.18 E-value=47 Score=30.67 Aligned_cols=37 Identities=11% Similarity=0.049 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCCCCH----HHHHHHHHHHHhCCCeEEEEe
Q 012587 5 DHVHVAILPLPAVGHV----NSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 5 ~~~~il~~~~~~~Gh~----~p~l~La~~L~~rGH~Vt~~~ 41 (460)
+..||+++..|..+-- ..-..+.++|.+.||+|+.+.
T Consensus 2 ~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 2 QNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 3459998877644432 233468899999999999874
No 484
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=25.15 E-value=59 Score=29.62 Aligned_cols=38 Identities=8% Similarity=0.183 Sum_probs=25.2
Q ss_pred HHHHHHHcCCCCccEEEEcCCcchHHHHHHHhCCceEEEec
Q 012587 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 100 ~l~~~~~~~~~~pD~vv~D~~~~~~~~~A~~lgiP~v~~~~ 140 (460)
.++.++.- +||+||..........--+..|||++.+..
T Consensus 108 n~E~i~al---~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 108 NTEACVAA---TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CHHHHHHT---CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CHHHHHhc---CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 44555544 999999875432333444678999999864
No 485
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=25.09 E-value=3.1e+02 Score=23.04 Aligned_cols=93 Identities=17% Similarity=0.190 Sum_probs=50.6
Q ss_pred HHHHHHHHHhCCCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCCChHHHHHHHHhhCcHHHH
Q 012587 23 MLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKFPELVDSLNCATPPLLK 102 (460)
Q Consensus 23 ~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (460)
...+-+.|+++|..+.++++......+.+..|- ...+.+....+... ..+.-. +.+.
T Consensus 100 ~~~ll~~L~~~g~~i~i~t~~~~~~~~l~~~gl-------~~~fd~i~~~~~~~-----~~KP~p-----------~~~~ 156 (243)
T 4g9b_A 100 IRSLLADLRAQQISVGLASVSLNAPTILAALEL-------REFFTFCADASQLK-----NSKPDP-----------EIFL 156 (243)
T ss_dssp HHHHHHHHHHTTCEEEECCCCTTHHHHHHHTTC-------GGGCSEECCGGGCS-----SCTTST-----------HHHH
T ss_pred HHHHHHhhhcccccceecccccchhhhhhhhhh-------cccccccccccccc-----CCCCcH-----------HHHH
Confidence 456778899999999999876555555444440 00122222221111 111111 1222
Q ss_pred HHHHcCCCCc-cEE-EEcCCcchHHHHHHHhCCceEEEec
Q 012587 103 EMVSDSKSPV-NCI-ITDGYMSRAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 103 ~~~~~~~~~p-D~v-v~D~~~~~~~~~A~~lgiP~v~~~~ 140 (460)
..++.++..| ++| |-|. ......|+..|+++|.+..
T Consensus 157 ~a~~~lg~~p~e~l~VgDs--~~di~aA~~aG~~~I~V~~ 194 (243)
T 4g9b_A 157 AACAGLGVPPQACIGIEDA--QAGIDAINASGMRSVGIGA 194 (243)
T ss_dssp HHHHHHTSCGGGEEEEESS--HHHHHHHHHHTCEEEEEST
T ss_pred HHHHHcCCChHHEEEEcCC--HHHHHHHHHcCCEEEEECC
Confidence 2233332133 444 5553 4689999999999999754
No 486
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=25.05 E-value=39 Score=32.42 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEe
Q 012587 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (460)
Q Consensus 4 ~~~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~ 41 (460)
.+|++|.++-.|-.| +.+|..|+++||+|+.+=
T Consensus 19 ~~m~~IaViGlGYVG-----Lp~A~~~A~~G~~V~g~D 51 (444)
T 3vtf_A 19 SHMASLSVLGLGYVG-----VVHAVGFALLGHRVVGYD 51 (444)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHHTCEEEEEC
T ss_pred CCCCEEEEEccCHHH-----HHHHHHHHhCCCcEEEEE
Confidence 468899999665444 889999999999998774
No 487
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=25.00 E-value=1.1e+02 Score=26.68 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=25.6
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+++++.++.| -=.++|+.|.++|++|.+...
T Consensus 29 k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 29 RIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888887654 245789999999999998765
No 488
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=24.99 E-value=77 Score=29.42 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=31.0
Q ss_pred CcEE-EEEc-CCCCCCHHHHHHHHHHHHhCCCeEEEEeCc
Q 012587 6 HVHV-AILP-LPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (460)
Q Consensus 6 ~~~i-l~~~-~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~~ 43 (460)
.+|+ +|+. -|+-|-..-...||..|+++|++|.++-..
T Consensus 142 ~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 142 KSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp SCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 3455 4444 478999999999999999999999999864
No 489
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=24.99 E-value=71 Score=29.29 Aligned_cols=39 Identities=13% Similarity=0.245 Sum_probs=26.3
Q ss_pred HHHHHHHHcCCCCccEEEEcCCcc-hHHHHHHHhCCceEEEec
Q 012587 99 PLLKEMVSDSKSPVNCIITDGYMS-RAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 99 ~~l~~~~~~~~~~pD~vv~D~~~~-~~~~~A~~lgiP~v~~~~ 140 (460)
..++.+++- +||+||...... ....+.+.+|||++.+..
T Consensus 87 ~n~E~Ilal---~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 87 PDLESLITL---QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCHHHHHHH---CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCHHHHhcC---CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 345666655 999999865422 233445788999999754
No 490
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=24.93 E-value=1.1e+02 Score=24.33 Aligned_cols=98 Identities=10% Similarity=0.097 Sum_probs=62.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhC--CCeEEEEeCccchhHHhhccccccccccCCCCceEEecCCCCCCCCCCCCC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPD 84 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (460)
.+|++...- .+=.-++.+|+.|.+. ||++. .+......+.+..| +....+..+ +++
T Consensus 12 g~V~lsv~D--~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~~G-----------l~v~~v~k~-~eG------ 69 (152)
T 1b93_A 12 KHIALVAHD--HCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRATG-----------MNVNAMLSG-PMG------ 69 (152)
T ss_dssp CEEEEEECG--GGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHHHC-----------CCCEEECCG-GGT------
T ss_pred CEEEEEEeh--hhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHHhC-----------ceeEEEEec-CCC------
Confidence 466666543 4556789999999999 99664 44477777776344 433333211 110
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCccEEEEcCC--cc--------hHHHHHHHhCCceEEEec
Q 012587 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY--MS--------RAIDAAREVGVSIIYFRT 140 (460)
Q Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~pD~vv~D~~--~~--------~~~~~A~~lgiP~v~~~~ 140 (460)
..+++.+++++ .+.|+||.-.- .. ...-+|-.++||+++...
T Consensus 70 ------------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 121 (152)
T 1b93_A 70 ------------GDQQVGALISE--GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVA 121 (152)
T ss_dssp ------------HHHHHHHHHHT--TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHH
T ss_pred ------------CCchHHHHHHC--CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 12566777777 49999985432 11 356788899999998433
No 491
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=24.91 E-value=54 Score=28.15 Aligned_cols=22 Identities=14% Similarity=0.226 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCCeEEEEeCcc
Q 012587 23 MLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 23 ~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
-.++|++|.++|++|+++..+.
T Consensus 37 G~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 37 GFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHCCCEEEEEECCc
Confidence 4688999999999999987643
No 492
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=24.83 E-value=67 Score=28.12 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=25.9
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.|+++++.++.| ==.++++.|.++|++|.++..
T Consensus 16 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 48 (266)
T 3p19_A 16 KKLVVITGASSG---IGEAIARRFSEEGHPLLLLAR 48 (266)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 478888887653 245789999999999998864
No 493
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=24.76 E-value=63 Score=27.47 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=22.8
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCC-CeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rG-H~Vt~~~~ 42 (460)
||.++++.++ |-+ =.+|++.|.++| |+|+.++.
T Consensus 23 mk~vlVtGat-G~i--G~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 23 MKNVLILGAG-GQI--ARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp CEEEEEETTT-SHH--HHHHHHHHTTCTTEEEEEEES
T ss_pred ccEEEEEeCC-cHH--HHHHHHHHHhCCCceEEEEEc
Confidence 4555555443 322 357899999999 99999875
No 494
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=24.71 E-value=2.4e+02 Score=25.03 Aligned_cols=115 Identities=6% Similarity=-0.035 Sum_probs=69.1
Q ss_pred HHHHHHHhhCCCcEEEEEccCCCCCCCCCCCCchHHHHHhcCCceeeeecChHhhhcccccccccccCChhHHHHHHHhC
Q 012587 286 IEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAG 365 (460)
Q Consensus 286 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~vp~~~il~~~~~~~~I~HGG~gs~~eal~~G 365 (460)
..+.+.++..+.++++.. +.-..+|+.+.+..+..++= -|+++ .=...|.+.+..|+.+|
T Consensus 156 ~~~~~~l~~~~~Dlivla--------~y~~il~~~~l~~~~~~~iN----------iHpSl--LP~~rG~~p~~~Ai~~G 215 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILA--------RYMQVLSPELCRRLDGWAIN----------IHHSL--LPGFKGAKPYHQAYNKG 215 (286)
T ss_dssp HHHHHHHHHHTCSEEEES--------SCCSCCCHHHHHHTTTSEEE----------EEECS--STTCCCSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEec--------ccccccCHHHHhhhcCCeEE----------ecccc--ccCCCCccHHHHHHHcC
Confidence 457777887788888777 33346777776654433321 12222 22345889999999999
Q ss_pred Cceecccccc--cchhhHHHHHhhhceeeeecCCcchHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 012587 366 MPMICWPSFA--DQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMA 426 (460)
Q Consensus 366 vP~l~~P~~~--DQ~~na~~~~e~~G~g~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~a~~l~ 426 (460)
+....+-.+. +..+-+..+. .--+.+...-|.++|.+.+..+-. .-|.+..+.+.
T Consensus 216 ~~~~G~Tvh~v~~~lD~GpIi~---Q~~~~i~~~dt~~~L~~r~~~~e~---~~l~~av~~~~ 272 (286)
T 3n0v_A 216 VKMVGATAHYINNDLDEGPIIA---QGVEVVDHSHYPEDLIAKGRDIEC---LTLARAVGYHI 272 (286)
T ss_dssp CSEEEEEEEECCSSTTCSCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CCeEEEEEEEEcCCCCCCceeE---EEEEEcCCCCCHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 9987776542 4444444341 223333346788888877776643 55666665543
No 495
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=24.70 E-value=94 Score=26.74 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=25.3
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 8 ~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|+++++.++.| ==.++|+.|.++|++|.++..
T Consensus 13 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 13 RIILVTGASDG---IGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888877653 235789999999999988874
No 496
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=24.64 E-value=72 Score=26.95 Aligned_cols=33 Identities=15% Similarity=0.335 Sum_probs=25.2
Q ss_pred CCccEEE-EcCCcc-hHHHHHHHhCCceEEEecch
Q 012587 110 SPVNCII-TDGYMS-RAIDAAREVGVSIIYFRTIS 142 (460)
Q Consensus 110 ~~pD~vv-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 142 (460)
..||+|| .|...- .+..=|.++|||+|.++.+-
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDTn 148 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCDSN 148 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeCCC
Confidence 3799876 676543 57777999999999988653
No 497
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=24.63 E-value=71 Score=27.60 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=24.6
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.|+++++.++.| ==.++++.|.++|++|.++..
T Consensus 2 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 2 KKVALVTGAGQG---IGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 366777766543 245789999999999998875
No 498
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=24.60 E-value=72 Score=26.39 Aligned_cols=37 Identities=16% Similarity=0.350 Sum_probs=26.6
Q ss_pred EEEEEcCCCC---CCHHHHHHHHHHHHhCCCeEEEEeCcc
Q 012587 8 HVAILPLPAV---GHVNSMLNLAELLGHAGIKITFLNTEH 44 (460)
Q Consensus 8 ~il~~~~~~~---Gh~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (460)
+|+|+|.-+. ---++...|++.|.++|.+|.|..+|-
T Consensus 48 ~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 48 KVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp EEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 6666664211 113567899999999999999999843
No 499
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=24.60 E-value=87 Score=29.18 Aligned_cols=32 Identities=13% Similarity=0.172 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 6 ~~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
.++|+++-.|- .-+..|..|+++||+|+++-.
T Consensus 3 ~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~ 34 (384)
T 2bi7_A 3 SKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQ 34 (384)
T ss_dssp CCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEES
T ss_pred cCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEe
Confidence 46898886663 356789999999999999965
No 500
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=24.55 E-value=42 Score=32.30 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=26.0
Q ss_pred cEEEEEcCCCCCCHHHHHHHHHHHHhCCCeEEEEeC
Q 012587 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (460)
Q Consensus 7 ~~il~~~~~~~Gh~~p~l~La~~L~~rGH~Vt~~~~ 42 (460)
|||.|+-.|..| +++|..|+++||+|+++..
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~ 33 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDT 33 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEEC
Confidence 699999776655 5789999999999998865
Done!