BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012588
(460 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O55236|MCE1_MOUSE mRNA-capping enzyme OS=Mus musculus GN=Rngtt PE=1 SV=1
Length = 597
Score = 184 bits (468), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 150/457 (32%), Positives = 223/457 (48%), Gaps = 56/457 (12%)
Query: 1 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKR 60
+I FL+ S+ A+ FA+ RPPGIYK +Y++ L+ Y + ++ P P P+W
Sbjct: 136 LICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYGDIE-EAPPPPVLPDWCF 194
Query: 61 ELDLNGEAVPDDDDDGVPAAALHEN---------NEVTMTNDDVLGDEIPNDQQ--DAFR 109
E + + D D P ++ + + + V G Q +
Sbjct: 195 EDEDEEDEDEDGKKDSEPGSSASFSKRRKERLKLGAIFLEGITVKGVTQVTTQPKLGEVQ 254
Query: 110 HFCYQTLKLNFGGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLI-TIDG 168
C+Q F G FPG+ PVS++ N++LL Q+ Y +WKADGTRYMMLI +
Sbjct: 255 QKCHQ-----FCGWEGSGFPGAQPVSMDKQNIRLLEQKPYKVSWKADGTRYMMLIDGTNE 309
Query: 169 CYLIDRCFN-FRRVQMRFPCRNSNEGLGEKTHHF--TLLDGEMIIDKLPDSRRQERRYLI 225
++IDR + F + FP R + H TLLDGEMIIDK+ + + RYLI
Sbjct: 310 VFMIDRDNSVFHVSNLEFPFRK------DLRMHLSNTLLDGEMIIDKV--NGQAVPRYLI 361
Query: 226 YDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDF 285
YD++ N V + F R + +E+E+I PR+ + + EPF VR K F
Sbjct: 362 YDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMKTGLIDKT------QEPFSVRPKQF 415
Query: 286 WLLSTVNKLLK-EFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVT 344
+ ++ KLL+ F ++SH+ DGL+FQ Y P + +LKWK +NSVDF ++T
Sbjct: 416 FDINISRKLLEGNFAKEVSHEMDGLIFQPIGK-YKPGRCDDILKWKPPSLNSVDFRLKIT 474
Query: 345 --------DDDRQLLYV--FERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWK 394
+ LLYV +ER ++ +E Y KIIEC ++ + W
Sbjct: 475 RMGGEGLLPQNVGLLYVGGYERPFAQIK-------VTKELKQYDNKIIECKFENNS--WV 525
Query: 395 CMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEI 431
MR R DKS PN NT V SI + +T+E+L I
Sbjct: 526 FMRQRIDKSFPNAYNTAMAVCNSISNPVTKEMLFEFI 562
>sp|Q17607|MCE1_CAEEL mRNA-capping enzyme OS=Caenorhabditis elegans GN=cel-1 PE=1 SV=2
Length = 623
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 221/475 (46%), Gaps = 65/475 (13%)
Query: 1 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEWKR 60
+I +L + + + AI +FAE R GIYK +YI+ L+ Y D P P+W+R
Sbjct: 146 LIAAYLFQVEEYGLDAAIGEFAENRQKGIYKQDYIDDLFARYDPTEDDKILAPEKPDWER 205
Query: 61 ELDLNGEAVPDDDDDGVPAAALH------------------ENNEVTMTNDDVLGDEIPN 102
E+ + + D+G P+ + +N + + G ++
Sbjct: 206 EMSI---GMSTQIDNGRPSTSQQIPATNGNNNQNGNQLSGGGDNSKLFMDGLIRGVKVCE 262
Query: 103 DQ------QDAFRHFCYQTLKLNFGGRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKAD 156
D+ Q ++ C K N G FPG PVSL+ N+ LL Q Y +WKAD
Sbjct: 263 DEGKKSMLQAKIKNLC----KYNKQG-----FPGLQPVSLSRGNINLLEQESYMVSWKAD 313
Query: 157 GTRYMMLITIDGCYLIDRCFNFRRVQ-MRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLP- 214
G RY++ I Y DR ++ + F +N + TL+D E+IIDK+
Sbjct: 314 GMRYIIYINDGDVYAFDRDNEVFEIENLDFVTKNGAPLME------TLVDTEVIIDKVEI 367
Query: 215 -DSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRY 273
+ + R LIYD+M N +V++ PFY+R+++++ E+I+ R + ++
Sbjct: 368 NGAMCDQPRMLIYDIMRFNSVNVMKEPFYKRFEIIKTEIIDMRT------AAFKTGRLKH 421
Query: 274 DLEPFRVRRKDFWLLSTVNKLLK-EFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYA 332
+ + VRRKDF+ L KL +F+ + H+ DGL+FQ Y + +LKWK
Sbjct: 422 ENQIMSVRRKDFYDLEATAKLFGPKFVQHVGHEIDGLIFQPKKTKYETGRCDKVLKWKPP 481
Query: 333 RMNSVDFLFEVTDDDRQLL------YVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTW 386
NSVDFL +V ++ + Y+F + T ++ Y KIIECT
Sbjct: 482 SHNSVDFLLKVEKKCKEGMLPEWIGYLFVQNLSDPFGTMKATATLKK---YHNKIIECTL 538
Query: 387 DPDVQL----WKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEIIRL 437
D Q WK MR RTDKS PN + T V+ ++ + +TE L+ + +R+
Sbjct: 539 LVDNQGRPKEWKFMRERTDKSLPNGLRTAENVVETMVNPVTETYLIEYVNHALRV 593
>sp|O60942|MCE1_HUMAN mRNA-capping enzyme OS=Homo sapiens GN=RNGTT PE=1 SV=1
Length = 597
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 151/475 (31%), Positives = 222/475 (46%), Gaps = 92/475 (19%)
Query: 1 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHE---------------- 44
+I FL+ S+ A+ FA+ RPPGIYK +Y++ L+ Y +
Sbjct: 136 LICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYGDIEEAPPPPLLPDWCFE 195
Query: 45 ----------KRLDSTPCPSTPEWKRE---LDLNGEAVPDDDDDGVPAAALHENNEVTMT 91
+ +S P S KR L L + +GV + + +T
Sbjct: 196 DDEDEDEDEDGKKESEPGSSASFGKRRKERLKLGAIFL-----EGVTVKGVTQ-----VT 245
Query: 92 NDDVLGDEIPNDQQDAFRHFCYQTLKLNFGGRGNMQFPGSHPVSLNSDNLQLLRQRYYYA 151
LG+ + C+Q F G FPG+ PVS++ N++LL + Y
Sbjct: 246 TQPKLGE---------VQQKCHQ-----FCGWEGSGFPGAQPVSMDKQNIKLLDLKPYKV 291
Query: 152 TWKADGTRYMMLI-TIDGCYLIDRCFN-FRRVQMRFPCRNSNEGLGEKTHHF--TLLDGE 207
+WKADGTRYMMLI + ++IDR + F + FP R + H TLLDGE
Sbjct: 292 SWKADGTRYMMLIDGTNEVFMIDRDNSVFHVSNLEFPFRK------DLRMHLSNTLLDGE 345
Query: 208 MIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSR 267
MIID++ + + RYLIYD++ N V + F R + +E+E+I PR+ + +
Sbjct: 346 MIIDRV--NGQAVPRYLIYDIIKFNSQPVGDCDFNVRLQCIEREIISPRHEKMKTGLIDK 403
Query: 268 NPYYRYDLEPFRVRRKDFWLLSTVNKLLK-EFIPKLSHDADGLVFQGWDDPYVPRTHEGL 326
EPF VR K F+ + T KLL+ F ++SH+ DGL+FQ Y P + +
Sbjct: 404 TQ------EPFSVRNKPFFDICTSRKLLEGNFAKEVSHEMDGLIFQP-TGKYKPGRCDDI 456
Query: 327 LKWKYARMNSVDFLFEVT--------DDDRQLLYV--FERGKKKLMEGSSVEFTDREPSF 376
LKWK +NSVDF ++T + LLYV +ER ++ +E
Sbjct: 457 LKWKPPSLNSVDFRLKITRMGGEGLLPQNVGLLYVGGYERPFAQIK-------VTKELKQ 509
Query: 377 YSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEI 431
Y KIIEC ++ + W MR RTDKS PN NT V SI + +T+E+L I
Sbjct: 510 YDNKIIECKFENNS--WVFMRQRTDKSFPNAYNTAMAVCNSISNPVTKEMLFEFI 562
>sp|Q6NY98|MCE1_DANRE mRNA-capping enzyme OS=Danio rerio GN=rngtt PE=2 SV=1
Length = 598
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 169/315 (53%), Gaps = 37/315 (11%)
Query: 128 FPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITIDG---CYLIDRCFNFRRVQ-M 183
FPG+ PVS++ N+++L Q Y +WKADGTRYMML IDG Y+IDR + ++ +
Sbjct: 272 FPGAQPVSMDRKNIRMLEQNGYKVSWKADGTRYMML--IDGRNEVYMIDRDNSVFHIENL 329
Query: 184 RFPCRNSNEGLGEKTH-HFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFY 242
FP R + H TLLDGEMIIDK+ + + RYLIYD++ + V + F
Sbjct: 330 EFPFRKD-----LRIHLSNTLLDGEMIIDKV--NGQPVPRYLIYDIIKFSGQPVGQCDFN 382
Query: 243 ERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK-EFIPK 301
R +EKE+I PR +E+ + Q EPF VR K F+ + KLL+ F +
Sbjct: 383 RRLLCIEKEIISPR-FEKMKLGQIDKAK-----EPFSVRNKPFFDIHAARKLLEGSFTSQ 436
Query: 302 LSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQ--------LLYV 353
+SH+ DGL+FQ Y P + +LKWK NSVDF ++T + LLYV
Sbjct: 437 VSHEVDGLIFQPIGK-YKPGRCDDILKWKPPSHNSVDFRLKITKVGGEGLIPQTVGLLYV 495
Query: 354 FERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRK 413
M + ++ T ++ Y KIIECT+ + W MR R DKS PN +T
Sbjct: 496 GNYD----MPFAQMKIT-KDLKQYDNKIIECTFVNNT--WVFMRQRVDKSFPNAYDTAMA 548
Query: 414 VMRSIRDNITEEVLL 428
V SI+ +T+E+LL
Sbjct: 549 VCNSIQHPVTKEILL 563
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 1 MIVHFLMRSQSMSVAQAIKKFAEVRPPGIYKNEYIEALYTFYHEKRLDSTPCPSTPEW 58
+I +L+ S+ A+ FA+ RPPGIYK +Y++ L+ Y + D+ P PEW
Sbjct: 136 LICAYLVEKMDWSIEAAVAAFAQARPPGIYKGDYLKELFRRYGDVE-DAPAAPPLPEW 192
>sp|P40997|MCE1_SCHPO mRNA-capping enzyme subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ceg1 PE=1 SV=1
Length = 402
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 177/356 (49%), Gaps = 39/356 (10%)
Query: 128 FPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITID-------GCYLIDRCFNFRR 180
FPGS PVS + +LQ L+++ Y+ K+DG R ++ +T YL DR NF
Sbjct: 41 FPGSQPVSFSKKHLQALKEKNYFVCEKSDGIRCLLYMTEHPRYENRPSVYLFDRKMNFYH 100
Query: 181 VQMRF-PCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIER 239
V+ F P N G +K H TLLDGE+++D P ++Q RYL++D +A + + R
Sbjct: 101 VEKIFYPVENDKSG--KKYHVDTLLDGELVLDIYPGGKKQ-LRYLVFDCLACDGIVYMSR 157
Query: 240 PFYERWKMLEKEVIEPRN-YERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEF 298
+R + K + +P + Y + ++ ++ + PF K L + KL E
Sbjct: 158 LLDKRLGIFAKSIQKPLDEYTKTHMRETA-------IFPFLTSLKKMELGHGILKLFNEV 210
Query: 299 IPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLF-------EVTDDDRQLL 351
IP+L H DGL+F + PYV T + LLKWK MN++DF+ E D D +
Sbjct: 211 IPRLRHGNDGLIFTCTETPYVSGTDQSLLKWKPKEMNTIDFMLKLEFAQPEEGDIDYSAM 270
Query: 352 YVFERG---KKKLMEGSSVEFTDRE-----PSF---YSGKIIECTWDPDVQLWKCMRIRT 400
F+ G + + + + D + SF S +I+EC D D W+ +R R
Sbjct: 271 PEFQLGVWEGRNMYSFFAFMYVDEKEWEKLKSFNVPLSERIVECYLD-DENRWRFLRFRD 329
Query: 401 DKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEIIRLPMYADRIRNDSKAHLHTSS 456
DK N I+T + V++SI D +++E LL E+ IIR Y + + +K L +S
Sbjct: 330 DKRDANHISTVKSVLQSIEDGVSKEDLLKEMP-IIREAYYNRKKPSVTKRKLDETS 384
>sp|Q6FQ31|MCE1_CANGA mRNA-capping enzyme subunit alpha OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CEG1 PE=3 SV=1
Length = 449
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 179/386 (46%), Gaps = 81/386 (20%)
Query: 117 KLNFGGRGNMQFPGSHPVSL-NSDNLQLLRQRYYYATWKADGTRYMMLITID------GC 169
KL + + FPGS PVS +SD L + YY K DG R +ML+ ++ GC
Sbjct: 28 KLLNSPKPSKTFPGSQPVSFQHSDIRDKLVAQDYYVCEKTDGLRVLMLVVVNPITGEQGC 87
Query: 170 YLIDRCFNFRRVQ-MRFP--CRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIY 226
++IDR N+ V FP + E L E + + TL+DGE++I K P ++ QE RYL++
Sbjct: 88 FMIDRENNYYLVNGFHFPRLPQKKKEELLETSQNGTLIDGELVIQKNPMTKLQELRYLMF 147
Query: 227 DMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRK--- 283
D +AIN S+++ P R L KE +P Y+ +IY + + PF++ K
Sbjct: 148 DCLAINGRSLVQSPTSSRLAHLGKEFYKPY-YDLRSIYPDKCATF-----PFKLSMKHMD 201
Query: 284 -DFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEG-LLKWKYARMNSVDF-- 339
+ L+ N L KL H +DGL+F PY + LLKWK + NSVDF
Sbjct: 202 FSYSLVKVANSL-----DKLPHLSDGLIFTPVRTPYAVGGKDSLLLKWKPEQENSVDFKL 256
Query: 340 LFEV--TDDDRQ------------------LLYVFERG-----------------KKKLM 362
+ E+ T+D+ LYV++ G + +++
Sbjct: 257 ILEIPMTEDNSVAKKDPRRWYYNYDAKPTFALYVWQGGSDVNTKLQNFEQPFDKREMQVL 316
Query: 363 EGSSVEFTD--------------REPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDI 408
E + F + EP +G+I+ECT DP+ W +R R DK N
Sbjct: 317 EKTYKRFAELSISDEQWQELKNLEEP--LNGRIVECTKDPETGSWTMLRFRDDKLNGNHT 374
Query: 409 NTYRKVMRSIRDNITEEVLLNEIQEI 434
+ +KV+ SI D++T + L + EI
Sbjct: 375 SVVQKVLESISDSVTIDDLAESVPEI 400
>sp|Q7SB53|MCE1_NEUCR mRNA-capping enzyme subunit alpha OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=NCU06260 PE=3 SV=1
Length = 402
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 68/364 (18%)
Query: 122 GRGNMQFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLITIDG-----CYLIDRCF 176
GR ++ FPG+ PVS +L+ LR+ YY K+DG RY++ +T+D YLIDR
Sbjct: 34 GRSSIGFPGAQPVSFARKHLEELRREDYYVCEKSDGIRYLLYLTVDEEGQEVQYLIDRKN 93
Query: 177 NF---RRVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSR-RQERRYLIYDMMAIN 232
++ R M FP N + H T++DGE+++D +P + R+E R+L++D++A++
Sbjct: 94 DYWFLPRNSMHFPMPNDIQAF----HRGTIIDGELVMDTVPGTNGRKEPRFLVFDLLALD 149
Query: 233 -QASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTV 291
+A ++ +P +R + EP Q P+ F+V K L +
Sbjct: 150 DKAELLNKPLDKRLGYFSAYIYEPYKKLLQQFPQE-IPFMA-----FKVEMKRMELSYGI 203
Query: 292 NKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLL 351
+ +E IP L HD+DGL+F PY T +LKWK N++DF +
Sbjct: 204 ETMFREVIPALKHDSDGLIFTCRTTPYHFGTDPHILKWKAPHENTLDFRMRLN------F 257
Query: 352 YVFERGKKKLMEGSSVEFTD------REPSFYSG-------------------------- 379
+ + + +L EG +FTD E + G
Sbjct: 258 PLVQATEAELDEGFPEQFTDYDSVPQAELYVFCGNDGPGGSKYELFPDPLYIAEDEWETL 317
Query: 380 ---------KIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNE 430
+++EC D + + W+ R R DK+ N +T VM SIRD ++++ LL+
Sbjct: 318 KALGDPLQDRVVECCLDAENR-WRLFRFRDDKNEANHTSTVSSVMASIRDGVSDQELLSA 376
Query: 431 IQEI 434
I
Sbjct: 377 ATAI 380
>sp|Q6CWR0|MCE1_KLULA mRNA-capping enzyme subunit alpha OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CEG1 PE=3 SV=1
Length = 466
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 183/397 (46%), Gaps = 76/397 (19%)
Query: 128 FPGSHPVSLNSDNLQ--LLRQRYYYATWKADGTRYMMLITID------GCYLIDRCFNFR 179
FPGS PVS + +++ LL Q YY K DG R +MLI ++ GC++IDR N+
Sbjct: 40 FPGSQPVSFHLADIEEKLLAQDYYVCE-KTDGLRALMLIMVNPVTKEQGCFMIDRENNYY 98
Query: 180 RVQ-MRFPC--RNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASV 236
V RFPC R + + L E TL+DGE+++ P ++ +E RYL++D +A+N S+
Sbjct: 99 MVNGFRFPCLPRANKKELLETLQDGTLIDGELVMQTNPVTKLKELRYLMFDCLAVNGRSL 158
Query: 237 IERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK 296
++ P R L KE +P Y+ + + R + PF++ K + K+ K
Sbjct: 159 VQSPTSSRLAHLGKEFFKPY-YDLRSYFPDRCSTF-----PFKISMKHMNFSYDLAKVAK 212
Query: 297 EFIPKLSHDADGLVFQGWDDPY-VPRTHEGLLKWKYARMNSVDFLFEVTD---DDRQL-- 350
+ L H +DGL+F Y + LLKWK N+VDF + +D+ L
Sbjct: 213 T-LDSLPHVSDGLIFTPVQAAYHIGGKDSYLLKWKPEVENTVDFKLIIEPPVVEDKSLPK 271
Query: 351 -----------------LYVFERGKK-----------------KLMEG-----SSVEFTD 371
LYV++ G +L+E + +E D
Sbjct: 272 SDKNRFYYNYDVKPLFHLYVWQGGNDVNNRIQDFEQPFTKSDLELLERTYRKFAEIEIDD 331
Query: 372 R---------EPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNI 422
+ EP +G+I+EC+ D + WK +R R DK N ++ +KV+ SI D++
Sbjct: 332 KQWNELKAMEEP--LNGRIVECSKDQESGAWKLLRFRDDKLNGNHVSVVQKVLESIGDSV 389
Query: 423 TEEVLLNEIQEI-IRLPMYADRIRNDSKAHLHTSSAR 458
+ + L + E+ R ++N K H +SAR
Sbjct: 390 SLDDLEQVVDEMRSRWKEREQGLKNAQKQFNHQASAR 426
>sp|Q01159|MCE1_YEAST mRNA-capping enzyme subunit alpha OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CEG1 PE=1 SV=2
Length = 459
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 167/370 (45%), Gaps = 73/370 (19%)
Query: 128 FPGSHPVSL-NSDNLQLLRQRYYYATWKADGTRYMMLITID------GCYLIDRCFNFRR 180
FPGS PVS +SD + L YY K DG R +M I I+ GC++IDR N+
Sbjct: 43 FPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYL 102
Query: 181 VQ-MRFP--CRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVI 237
V RFP + E L E TLLDGE++I P ++ QE RYL++D +AIN +
Sbjct: 103 VNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLT 162
Query: 238 ERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKE 297
+ P R L KE +P ++ Y +R + PF++ K + K+ K
Sbjct: 163 QSPTSSRLAHLGKEFFKPY-FDLRAAYPNRCTTF-----PFKISMKHMDFSYQLVKVAKS 216
Query: 298 FIPKLSHDADGLVFQGWDDPYVPRTHEG-LLKWKYARMNSVDFLF----------EVTDD 346
+ KL H +DGL+F PY + LLKWK + N+VDF + D
Sbjct: 217 -LDKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKD 275
Query: 347 DRQ------------LLYV-----------------FERGKKKLMEGSSVEFTDREPS-- 375
DR LYV F+R + +++E + +F + S
Sbjct: 276 DRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDE 335
Query: 376 ----------FYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEE 425
+G+I+EC + + W+ +R R DK N + +KV+ SI D+++
Sbjct: 336 EWQNLKNLEQPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVS-- 393
Query: 426 VLLNEIQEII 435
L +++EI+
Sbjct: 394 --LEDLEEIV 401
>sp|P78587|MCE1_CANAX mRNA-capping enzyme subunit alpha OS=Candida albicans GN=CGT1 PE=1
SV=1
Length = 449
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 170/353 (48%), Gaps = 45/353 (12%)
Query: 122 GRGNMQFPGSHPVSLNSDNLQ-LLRQRYYYATWKADGTRYMMLITID-----GCYLIDRC 175
GR N FPGS PVS +L+ L Q+ Y+ K DG R ++ + D G +L+ R
Sbjct: 34 GRRNTGFPGSQPVSFERRHLEETLMQKDYFVCEKTDGLRCLLFLINDPDKGEGVFLVTRE 93
Query: 176 FNFRRV-QMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQA 234
++ + + FP + HH TLLDGE++++ + RY+I+D +AI+
Sbjct: 94 NDYYFIPNIHFPLSVNETREKPTYHHGTLLDGELVLENR-NVSEPVLRYVIFDALAIHGK 152
Query: 235 SVIERPFYERWKMLEKEVIEP-RNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNK 293
+I+RP +R + + V++P N+++HN +P + PF+V K +
Sbjct: 153 CIIDRPLPKRLGYITENVMKPFDNFKKHNPDIVNSPEF-----PFKVGFKTMLTSYHADD 207
Query: 294 LLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYV 353
+L + + KL H +DGL++ + PYV T + LLKWK A N+VDF E ++ Q +
Sbjct: 208 VLSK-MDKLFHASDGLIYTCAETPYVFGTDQTLLKWKPAEENTVDFQLEFVFNEVQDPDL 266
Query: 354 FERG---------------KKKLMEGSSV--EFTDREPS------------FYSGKIIEC 384
ER K ++ +GS+V +F + S G+I EC
Sbjct: 267 DERDPTSTYLDYDAKPNLIKLRVWQGSNVHTDFAKLDLSDDDWERLKALEQPLQGRIAEC 326
Query: 385 TWDPDVQ-LWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEIIR 436
+ W+ +R R DKS N I+ K++ SI+D + E+ ++ +I R
Sbjct: 327 RQSTTKKGYWEMLRFRNDKSNGNHISVVEKILVSIKDGVKEKEVIEWCPKISR 379
>sp|Q755D0|MCE1_ASHGO mRNA-capping enzyme subunit alpha OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CEG1
PE=3 SV=1
Length = 463
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 170/370 (45%), Gaps = 71/370 (19%)
Query: 128 FPGSHPVSLNSDNLQ--LLRQRYYYATWKADGTRYMMLITID------GCYLIDRCFNFR 179
FPGS PVS +++ LL Q YY K DG R +MLI ++ GC+LIDR N+
Sbjct: 39 FPGSQPVSFQHVDIEEKLLAQDYYVCE-KTDGLRALMLIIMNPVTKEQGCFLIDRENNYY 97
Query: 180 RVQ-MRFP--CRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASV 236
+ RFP R + + L E TL+DGE+++ P +R +E RYL++D +AIN ++
Sbjct: 98 LLNGFRFPRLPRANRKELLETLQDGTLVDGELVVQTNPATRLRELRYLMFDCLAINGRAL 157
Query: 237 IERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK 296
++ P R L KE +P Y+ Y R + PF++ K ++++
Sbjct: 158 VQSPTSSRLAHLGKEFYKPY-YDLRAYYPDRCATF-----PFKLSMKHMNFSFDLDRVAG 211
Query: 297 EFIPKLSHDADGLVFQGWDDPY-VPRTHEGLLKWKYARMNSVDFL----FEVTDDDRQL- 350
+ KL H +DGL+F D PY V LLKWK + N+VDF V +DD
Sbjct: 212 S-LDKLPHVSDGLIFTAVDTPYTVGGKDSTLLKWKPEQENTVDFKMILEIPVVEDDTLPK 270
Query: 351 -----------------LYVFERG--------------KKKLME--------GSSVEFTD 371
LY+++ G KK +E + ++ +D
Sbjct: 271 KDRNRFYYNFDVKPSFHLYIWQGGPDVNTRLHDFEQPFSKKELEILHRTYKVFAELQISD 330
Query: 372 RE-------PSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITE 424
+ +G+I+EC D + WK +R R DK N ++ +KV+ SI D++
Sbjct: 331 EQWAKMKALEQPLNGRIVECAKDQETGEWKFLRFRDDKLNGNHVSVVQKVLESISDSVKL 390
Query: 425 EVLLNEIQEI 434
E L + I I
Sbjct: 391 EDLEHMIPRI 400
>sp|Q6C783|MCE1_YARLI mRNA-capping enzyme subunit alpha OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=CEG1 PE=3 SV=1
Length = 391
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 175/404 (43%), Gaps = 61/404 (15%)
Query: 99 EIPNDQQ--DAFRHFCYQTLKLNFGGRGNMQFPGSHPVSLNSDNLQL-LRQRYYYATWKA 155
EIP +Q DA +L + + FPG+ PVS +++ L +R YY K+
Sbjct: 7 EIPGEQAPPDAAHQLKVDVARL--LQKPKLNFPGAQPVSFARKHIEEELFKRDYYVCEKS 64
Query: 156 DGTRYMMLITIDG---------CYLIDRCFNFRRVQM-RFPCRNSNEGLGEKTHHFTLLD 205
DG R +M +T + YLI R F + M FP SN+G K T++D
Sbjct: 65 DGLRCLMYVTWENNPDTGPQQVTYLITRNNEFFFIPMVHFP---SNDG---KPLQDTIVD 118
Query: 206 GEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQ 265
GE+++ K + + +L++D +A N+ + RP +R L + P Y
Sbjct: 119 GELVLTK---AEPRSLHFLMFDCLACNKILLTGRPLDKRLGYLNAAISHPLKE-----YL 170
Query: 266 SRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEG 325
+NP D PF VR KD V + F P L H DGL+F D PYV T E
Sbjct: 171 HKNPEVARDF-PFSVRVKDMQFAYNVMNVFASF-PHLPHITDGLIFTCRDHPYVSGTDER 228
Query: 326 LLKWKYARMNSVDFL-------FEVT--------DDDRQLLYVFERGKKKLMEGSSVEFT 370
+LKWK NSVDFL FE T D ++ + G+ + T
Sbjct: 229 ILKWKKQDENSVDFLMTMKFPIFEDTNGESWTDYDAKPEITLLVWTGRDGSRPYGELYLT 288
Query: 371 DREPSFYSG-------KIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNIT 423
D E +++EC D D + W+ +R R DK+ N I T KV+ SI D ++
Sbjct: 289 DEEWDNLKALEEPLEERVVECIKD-DKKRWRYLRFRDDKTNANYITTVEKVIDSIDDPVS 347
Query: 424 EEVLLNEIQEIIRL-------PMYADRIRNDSKAHLHTSSARRR 460
E+ LL+ +I L P DR R H H + R+
Sbjct: 348 EKNLLDAAPKIKELWKERNRRPRDEDRKRVGGDDHDHGAKRARQ 391
>sp|Q6BT58|MCE1_DEBHA mRNA-capping enzyme subunit alpha OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CEG1 PE=3 SV=2
Length = 458
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 168/353 (47%), Gaps = 50/353 (14%)
Query: 122 GRGNMQFPGSHPVSLNSDNLQ-LLRQRYYYATWKADGTRYMMLIT-----IDGCYLIDRC 175
GR N FPG+ P+S +L L + YY K+DG R ++ I +G +LI R
Sbjct: 34 GRRNPSFPGAQPISFERYHLNDTLMNKDYYVCEKSDGLRCLLFIINHPERGEGVFLITRE 93
Query: 176 FNFRRV-QMRFPCRNSNEGLGEKTHHFTLLDGEMIID--KLPDSRRQERRYLIYDMMAIN 232
++ + + FP N NE G+ HH TLLDGE++++ +P+ R+ I+D +AIN
Sbjct: 94 NDYYYIPNIHFPLTN-NEEKGKTYHHGTLLDGELVLETKNVPEPVL---RFCIFDALAIN 149
Query: 233 QASVIERPFYERWKMLEKEVIEP-RNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTV 291
+ +R +R + ++V++P N++R N P + PF+V K
Sbjct: 150 GKDITKRHLPKRLGYITEQVMKPFDNFKRKNPEIVNAPDF-----PFKVSFKLMTSSYHA 204
Query: 292 NKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEV-------- 343
+ +L + + +L H++DGL+F + PYV T LLKWK A N+VD+ E+
Sbjct: 205 DDVLSK-MDQLFHESDGLIFTCAETPYVFGTDSTLLKWKPAHENTVDYKMEMIFKKFQDP 263
Query: 344 -----------TDDDRQ----LLYVFERGK------KKLMEGSSVEFTDREPSFYSGKII 382
TD D + L V++ G K +E E G+I+
Sbjct: 264 DLDPRDPDSTYTDYDSKPELIKLRVWKGGADYEDFTKLSLENEDWEKLKNLRQPLQGRIV 323
Query: 383 ECTWD-PDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRDNITEEVLLNEIQEI 434
EC D W+ +R R DKS N I+ K++ SI+D ++EE L+ +I
Sbjct: 324 ECRKKLSDPGFWEMLRFRNDKSNGNHISVVDKILHSIQDGVSEEELIEACPKI 376
>sp|Q84424|MCE_PBCV1 mRNA-capping enzyme OS=Paramecium bursaria Chlorella virus 1
GN=A103R PE=1 SV=1
Length = 330
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 140/309 (45%), Gaps = 44/309 (14%)
Query: 127 QFPGSHPVSLNSDNLQLLRQRYYYATWKADGTRYMMLIT----IDGCYLIDRCFNFRRVQ 182
+ PG +PVS+ + + L+Q Y + K DG R+MM T C +IDR +
Sbjct: 55 RLPGPNPVSIERKDFEKLKQNKYVVSEKTDGIRFMMFFTRVFGFKVCTIIDRAMTVYLLP 114
Query: 183 MRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFY 242
+ R +G ++ DGE+ +D + ++ ++++D + ++ +V +
Sbjct: 115 FKNIPRVLFQG--------SIFDGELCVDIV----EKKFAFVLFDAVVVSGVTVSQMDLA 162
Query: 243 ERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKL 302
R+ +++ + E +N +P +R K+ W+ ++K+ + K
Sbjct: 163 SRFFAMKRSLKEFKNVPE---------------DPAILRYKE-WIPLEHPTIIKDHLKKA 206
Query: 303 S--HDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYVFERGKKK 360
+ + DGL+ D+P + + L K K +++DF+ D + +F+ +K
Sbjct: 207 NAIYHTDGLIIMSVDEPVIYGRNFNLFKLKPGTHHTIDFIIMSEDGT---IGIFDPNLRK 263
Query: 361 LMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPNDINTYRKVMRSIRD 420
+V + + G I+EC + WK ++ R+DK+ ND TY K + +I +
Sbjct: 264 -----NVPVGKLDGYYNKGSIVECGFADGT--WKYIQGRSDKNQANDRLTYEKTLLNIEE 316
Query: 421 NITEEVLLN 429
NIT + LL+
Sbjct: 317 NITIDELLD 325
>sp|Q0CKB1|CREC_ASPTN Probable catabolite repression protein creC OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=creC PE=3 SV=1
Length = 588
Score = 35.4 bits (80), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 329 WKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDP 388
WK A F F + D R L V E G ++M+ E D S+Y G I C W P
Sbjct: 321 WKLANQKITQFAF--SPDQRHLAVVLEDGSLRVMDYLEEEVLDIFRSYYGGLICVC-WSP 377
Query: 389 D 389
D
Sbjct: 378 D 378
>sp|Q2UM42|CREC_ASPOR Probable catabolite repression protein creC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=creC PE=3 SV=1
Length = 572
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 329 WKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDP 388
WK A F F + D R L V E G ++M+ E D S+Y G I C W P
Sbjct: 304 WKLANQKISQFAF--SPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYYGGLICVC-WSP 360
Query: 389 D 389
D
Sbjct: 361 D 361
>sp|B8N4F5|CREC_ASPFN Probable catabolite repression protein creC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=creC PE=3 SV=1
Length = 572
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 329 WKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDP 388
WK A F F + D R L V E G ++M+ E D S+Y G I C W P
Sbjct: 304 WKLANQKISQFAF--SPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYYGGLICVC-WSP 360
Query: 389 D 389
D
Sbjct: 361 D 361
>sp|A1DMI8|CREC_NEOFI Probable catabolite repression protein creC OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=creC PE=3 SV=1
Length = 603
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 329 WKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDP 388
WK A F F + D R L V E G ++M+ E D S+Y G I C W P
Sbjct: 333 WKLANQRISHFAF--SPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYYGGLICVC-WSP 389
Query: 389 D 389
D
Sbjct: 390 D 390
>sp|A1CTE6|CREC_ASPCL Probable catabolite repression protein creC OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=creC PE=3 SV=2
Length = 573
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 329 WKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDP 388
WK A F F + D R L V E G ++M+ E D S+Y G I C W P
Sbjct: 303 WKLANQRISHFAF--SPDQRHLAVVLEDGSLRVMDYLKEEVLDIFRSYYGGLICVC-WSP 359
Query: 389 D 389
D
Sbjct: 360 D 360
>sp|O13775|SYEC_SCHPO Probable glutamate--tRNA ligase, cytoplasmic OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC17A5.15c PE=1
SV=1
Length = 716
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 260 RHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIP--KLSHDADGLVFQGWDDP 317
R Y+ RNP Y++ ++ +R+ W S +N ++ + KL+ D + GWDDP
Sbjct: 404 RTTEYRDRNPLYQWMIKAMNLRKIHVWEFSRMN-FVRTLLSKRKLTEIVDHGLVWGWDDP 462
Query: 318 YVP 320
P
Sbjct: 463 RFP 465
>sp|Q9P4R5|CREC_EMENI Catabolite repression protein creC OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=creC PE=1 SV=2
Length = 592
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 329 WKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDP 388
W+ A F F + D R L V E G +LM+ E D S+Y G C W P
Sbjct: 325 WRLANQKITQFAF--SPDHRHLAVVLEDGTLRLMDYLQEEVLDVFRSYYGGFTCVC-WSP 381
Query: 389 D 389
D
Sbjct: 382 D 382
>sp|Q5UQX1|MCE_MIMIV Probable mRNA-capping enzyme OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R382 PE=1 SV=1
Length = 1170
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 134 VSLNSDNLQLLRQRYYYATWKADGTRYMMLITIDGCYLIDRCFNFRRVQMRFPCRNSNEG 193
+S+NS+++ Y T KADG RY + G YL+ N ++ P
Sbjct: 272 ISVNSNHIINFIPNRYAVTDKADGERYFLFSLNSGIYLL--SINLTVKKLNIPVL----- 324
Query: 194 LGEKTHHFTLLDGEMI 209
EK + L+DGE I
Sbjct: 325 --EKRYQNMLIDGEYI 338
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,905,806
Number of Sequences: 539616
Number of extensions: 8270061
Number of successful extensions: 17754
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 17671
Number of HSP's gapped (non-prelim): 46
length of query: 460
length of database: 191,569,459
effective HSP length: 121
effective length of query: 339
effective length of database: 126,275,923
effective search space: 42807537897
effective search space used: 42807537897
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)