Query 012594
Match_columns 460
No_of_seqs 129 out of 1271
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 12:29:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012594.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012594hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.1E-67 7.2E-72 508.7 38.6 430 4-456 13-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 8.1E-64 2.8E-68 494.3 38.4 451 3-459 7-481 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 8E-61 2.7E-65 471.1 43.9 436 4-457 6-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 4.1E-61 1.4E-65 470.1 39.9 437 3-458 6-453 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.7E-58 5.9E-63 452.9 35.0 427 4-456 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.6E-46 5.6E-51 366.8 38.2 399 2-457 10-422 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.9E-44 1.3E-48 347.6 27.9 358 4-455 22-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 7.3E-44 2.5E-48 346.8 25.3 379 5-457 1-400 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 1.4E-41 4.9E-46 331.1 36.4 376 4-455 20-412 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 5.7E-43 1.9E-47 340.7 24.3 374 5-457 1-401 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 1.2E-40 4E-45 323.3 37.4 377 4-456 4-398 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 2.8E-41 9.6E-46 326.9 27.3 351 5-435 1-366 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.9E-40 6.6E-45 325.2 32.0 374 4-455 20-433 (441)
14 2p6p_A Glycosyl transferase; X 100.0 2.5E-39 8.7E-44 311.8 35.0 354 5-456 1-379 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 3.2E-39 1.1E-43 315.9 35.4 365 4-436 7-383 (430)
16 4fzr_A SSFS6; structural genom 100.0 8.9E-38 3E-42 302.5 25.2 342 4-436 15-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 5.8E-37 2E-41 296.7 26.4 350 4-455 20-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 1.6E-35 5.4E-40 286.0 31.4 357 4-455 1-386 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 3.1E-33 1.1E-37 272.0 35.0 358 3-453 19-405 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2.5E-29 8.7E-34 239.1 30.0 319 1-429 1-333 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 1.3E-27 4.4E-32 202.3 15.5 163 257-435 6-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.1E-21 3.9E-26 187.0 26.0 321 1-434 1-337 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1.9E-16 6.6E-21 142.7 17.3 114 272-398 157-273 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 2E-15 7E-20 130.3 9.6 132 269-417 25-196 (224)
25 3c48_A Predicted glycosyltrans 99.6 2.7E-12 9.2E-17 125.2 27.8 366 3-457 19-427 (438)
26 3okp_A GDP-mannose-dependent a 99.5 2E-13 6.8E-18 131.2 18.9 343 1-457 1-378 (394)
27 2r60_A Glycosyl transferase, g 99.5 1.8E-11 6.2E-16 121.4 27.5 357 1-426 4-430 (499)
28 1vgv_A UDP-N-acetylglucosamine 99.5 5.7E-13 1.9E-17 127.6 15.9 136 271-427 204-349 (384)
29 3fro_A GLGA glycogen synthase; 99.5 1.1E-11 3.7E-16 120.7 24.9 388 3-456 1-428 (439)
30 3ot5_A UDP-N-acetylglucosamine 99.5 1.3E-12 4.3E-17 125.4 16.0 322 3-428 26-369 (403)
31 1v4v_A UDP-N-acetylglucosamine 99.4 1.4E-12 4.6E-17 124.6 16.1 136 272-429 198-343 (376)
32 3beo_A UDP-N-acetylglucosamine 99.4 4.8E-12 1.6E-16 120.6 19.5 137 271-426 204-348 (375)
33 3dzc_A UDP-N-acetylglucosamine 99.4 8.1E-13 2.8E-17 126.6 13.2 138 271-429 229-376 (396)
34 2gek_A Phosphatidylinositol ma 99.4 2.2E-12 7.6E-17 124.3 16.4 87 329-427 262-356 (406)
35 2iuy_A Avigt4, glycosyltransfe 99.4 5.3E-12 1.8E-16 118.8 13.9 155 275-458 164-338 (342)
36 2jjm_A Glycosyl transferase, g 99.4 7.9E-10 2.7E-14 106.0 28.8 320 5-427 16-357 (394)
37 2iw1_A Lipopolysaccharide core 99.3 6.1E-10 2.1E-14 105.9 24.6 164 272-454 195-370 (374)
38 2x6q_A Trehalose-synthase TRET 99.2 4E-10 1.4E-14 109.0 19.7 111 329-456 292-412 (416)
39 4hwg_A UDP-N-acetylglucosamine 99.2 1.5E-10 5.3E-15 109.9 13.0 318 5-423 10-345 (385)
40 3s28_A Sucrose synthase 1; gly 99.1 3.4E-09 1.2E-13 109.1 22.0 163 273-453 572-764 (816)
41 1rzu_A Glycogen synthase 1; gl 99.0 3E-08 1E-12 97.7 21.9 136 274-427 292-450 (485)
42 2qzs_A Glycogen synthase; glyc 98.9 1.3E-07 4.5E-12 93.2 22.1 159 274-455 293-473 (485)
43 3oy2_A Glycosyltransferase B73 98.9 2.5E-07 8.5E-12 89.1 21.2 162 273-455 184-387 (413)
44 2vsy_A XCC0866; transferase, g 98.8 4.1E-06 1.4E-10 84.1 30.3 91 330-429 434-531 (568)
45 2hy7_A Glucuronosyltransferase 98.8 1E-06 3.6E-11 84.5 21.8 76 329-422 264-354 (406)
46 2f9f_A First mannosyl transfer 98.6 8.5E-08 2.9E-12 80.6 9.0 140 274-432 24-175 (177)
47 2xci_A KDO-transferase, 3-deox 98.6 6.4E-06 2.2E-10 77.9 20.3 92 331-433 261-362 (374)
48 2bfw_A GLGA glycogen synthase; 98.0 0.00013 4.3E-09 62.1 13.3 84 331-427 96-188 (200)
49 3qhp_A Type 1 capsular polysac 98.0 4.3E-05 1.5E-09 62.9 10.0 135 273-427 2-147 (166)
50 4gyw_A UDP-N-acetylglucosamine 97.9 0.00015 5E-09 74.5 14.9 178 271-457 521-707 (723)
51 3tov_A Glycosyl transferase fa 97.9 0.00033 1.1E-08 65.4 16.2 104 4-136 8-115 (349)
52 3q3e_A HMW1C-like glycosyltran 97.8 0.00017 6E-09 71.0 13.0 146 272-428 440-596 (631)
53 1psw_A ADP-heptose LPS heptosy 97.8 0.00057 1.9E-08 63.8 15.1 102 5-135 1-105 (348)
54 3rhz_A GTF3, nucleotide sugar 97.6 8.1E-05 2.8E-09 69.0 6.9 109 331-455 215-337 (339)
55 2gt1_A Lipopolysaccharide hept 97.5 0.0082 2.8E-07 55.3 19.1 46 5-50 1-48 (326)
56 2x0d_A WSAF; GT4 family, trans 97.1 0.00032 1.1E-08 67.1 4.4 85 329-426 294-385 (413)
57 3vue_A GBSS-I, granule-bound s 96.1 0.032 1.1E-06 55.1 11.2 134 274-419 328-476 (536)
58 1g5t_A COB(I)alamin adenosyltr 93.5 0.61 2.1E-05 38.8 10.1 98 4-121 28-131 (196)
59 2phj_A 5'-nucleotidase SURE; S 93.0 0.35 1.2E-05 41.8 8.1 114 5-140 2-128 (251)
60 3zqu_A Probable aromatic acid 91.8 0.25 8.4E-06 41.6 5.6 49 1-50 1-49 (209)
61 3q0i_A Methionyl-tRNA formyltr 91.8 1.1 3.8E-05 40.5 10.2 37 1-42 4-40 (318)
62 2wqk_A 5'-nucleotidase SURE; S 91.7 0.58 2E-05 40.7 8.0 111 6-139 3-127 (251)
63 2q5c_A NTRC family transcripti 91.3 1.3 4.6E-05 36.8 9.6 44 93-143 129-172 (196)
64 3ty2_A 5'-nucleotidase SURE; s 90.3 0.49 1.7E-05 41.1 6.1 42 4-47 11-52 (261)
65 3auf_A Glycinamide ribonucleot 90.0 3 0.0001 35.6 10.7 106 3-141 21-133 (229)
66 3iqw_A Tail-anchored protein t 89.8 2.2 7.7E-05 38.9 10.5 41 5-45 16-57 (334)
67 3nb0_A Glycogen [starch] synth 89.5 2.2 7.5E-05 42.7 10.7 81 330-418 490-592 (725)
68 3t5t_A Putative glycosyltransf 89.2 1.8 6.3E-05 41.7 9.8 108 331-457 353-472 (496)
69 3ug7_A Arsenical pump-driving 88.7 5.3 0.00018 36.6 12.3 40 5-44 26-66 (349)
70 1uqt_A Alpha, alpha-trehalose- 88.6 2.5 8.4E-05 40.9 10.4 107 332-458 333-454 (482)
71 2ywr_A Phosphoribosylglycinami 88.5 3 0.0001 35.3 9.6 103 5-141 2-112 (216)
72 3vue_A GBSS-I, granule-bound s 88.4 0.25 8.6E-06 48.7 3.3 37 4-40 9-51 (536)
73 2bw0_A 10-FTHFDH, 10-formyltet 88.1 2.5 8.4E-05 38.5 9.4 102 4-142 22-132 (329)
74 3igf_A ALL4481 protein; two-do 88.0 2.9 9.8E-05 38.8 10.0 39 6-45 3-42 (374)
75 1j9j_A Stationary phase surviV 87.9 3.4 0.00012 35.6 9.6 114 5-139 1-128 (247)
76 2e6c_A 5'-nucleotidase SURE; S 87.6 4.3 0.00015 34.9 10.1 113 5-140 1-130 (244)
77 3av3_A Phosphoribosylglycinami 87.5 4.6 0.00016 34.0 10.1 104 5-141 4-114 (212)
78 3qjg_A Epidermin biosynthesis 87.1 0.78 2.7E-05 37.4 4.9 43 5-48 6-48 (175)
79 3zq6_A Putative arsenical pump 86.5 1.1 3.9E-05 40.7 6.4 38 6-43 15-53 (324)
80 3io3_A DEHA2D07832P; chaperone 85.9 2.3 7.9E-05 39.0 8.0 41 5-45 18-61 (348)
81 1l5x_A SurviVal protein E; str 85.6 2.6 8.8E-05 37.2 7.7 114 5-140 1-128 (280)
82 3q9l_A Septum site-determining 85.2 7.5 0.00025 33.6 10.9 37 6-42 3-41 (260)
83 2x0d_A WSAF; GT4 family, trans 85.0 0.51 1.7E-05 44.7 3.3 40 3-42 45-89 (413)
84 4dim_A Phosphoribosylglycinami 84.2 4.6 0.00016 37.8 9.6 37 1-42 4-40 (403)
85 3kcq_A Phosphoribosylglycinami 84.0 3.9 0.00013 34.5 7.9 103 1-141 5-114 (215)
86 3qxc_A Dethiobiotin synthetase 83.5 4.2 0.00014 35.1 8.1 34 5-38 21-56 (242)
87 4dzz_A Plasmid partitioning pr 83.0 5.9 0.0002 32.7 8.9 40 6-45 3-43 (206)
88 2i2x_B MTAC, methyltransferase 82.9 4.7 0.00016 35.2 8.4 39 3-41 122-160 (258)
89 2ejb_A Probable aromatic acid 82.4 2.5 8.5E-05 34.9 6.0 43 6-49 3-45 (189)
90 1g63_A Epidermin modifying enz 82.3 1.2 4E-05 36.6 3.9 47 1-50 1-47 (181)
91 1sbz_A Probable aromatic acid 82.1 1.7 5.9E-05 36.1 4.9 45 5-50 1-46 (197)
92 1ccw_A Protein (glutamate muta 81.8 2.6 8.8E-05 32.7 5.6 39 4-42 3-41 (137)
93 3rfo_A Methionyl-tRNA formyltr 81.6 7 0.00024 35.2 9.1 98 3-142 3-115 (317)
94 1kjn_A MTH0777; hypotethical p 81.1 4.3 0.00015 31.5 6.3 47 4-50 6-54 (157)
95 1jkx_A GART;, phosphoribosylgl 81.0 13 0.00043 31.3 10.0 103 5-141 1-111 (212)
96 3bfv_A CAPA1, CAPB2, membrane 80.9 9.4 0.00032 33.5 9.7 38 4-41 81-120 (271)
97 1fmt_A Methionyl-tRNA FMet for 80.6 7.9 0.00027 34.9 9.1 98 3-142 2-114 (314)
98 2v4n_A Multifunctional protein 80.4 6.2 0.00021 34.1 8.0 111 5-139 2-126 (254)
99 2yxb_A Coenzyme B12-dependent 79.7 2.4 8.2E-05 34.0 4.9 40 3-42 17-56 (161)
100 3fgn_A Dethiobiotin synthetase 79.6 13 0.00044 32.2 9.9 124 4-142 25-168 (251)
101 3mcu_A Dipicolinate synthase, 78.4 2.5 8.5E-05 35.4 4.7 45 2-47 3-48 (207)
102 1p3y_1 MRSD protein; flavoprot 78.2 1.4 4.8E-05 36.6 3.1 44 4-48 8-51 (194)
103 3tqr_A Phosphoribosylglycinami 78.2 9.7 0.00033 32.1 8.3 105 3-141 4-115 (215)
104 1meo_A Phosophoribosylglycinam 78.0 19 0.00065 30.1 10.1 103 6-141 2-111 (209)
105 3tqq_A Methionyl-tRNA formyltr 78.0 9.2 0.00032 34.4 8.7 33 5-42 3-35 (314)
106 3lqk_A Dipicolinate synthase s 77.0 2.5 8.5E-05 35.3 4.3 43 4-47 7-50 (201)
107 3cio_A ETK, tyrosine-protein k 76.4 13 0.00043 33.2 9.2 39 4-42 103-143 (299)
108 3lyu_A Putative hydrogenase; t 76.2 25 0.00084 27.2 10.6 36 5-43 19-54 (142)
109 2bln_A Protein YFBG; transfera 76.0 8.2 0.00028 34.6 7.8 96 5-142 1-108 (305)
110 1mvl_A PPC decarboxylase athal 75.1 4.1 0.00014 34.2 5.1 45 4-50 19-63 (209)
111 3da8_A Probable 5'-phosphoribo 74.8 7.1 0.00024 32.9 6.6 105 4-141 12-121 (215)
112 2iz6_A Molybdenum cofactor car 74.6 32 0.0011 27.8 10.7 77 333-419 92-173 (176)
113 3la6_A Tyrosine-protein kinase 74.6 15 0.00051 32.5 9.1 39 4-42 91-131 (286)
114 3dm5_A SRP54, signal recogniti 74.5 14 0.00049 34.9 9.3 40 6-45 102-141 (443)
115 3lrx_A Putative hydrogenase; a 73.2 32 0.0011 27.1 11.7 36 5-43 24-59 (158)
116 3tov_A Glycosyl transferase fa 73.0 24 0.00081 32.2 10.4 101 5-141 186-290 (349)
117 1y80_A Predicted cobalamin bin 72.9 6 0.00021 33.2 5.8 39 4-42 88-126 (210)
118 1psw_A ADP-heptose LPS heptosy 72.7 44 0.0015 30.1 12.2 102 6-139 182-288 (348)
119 3vot_A L-amino acid ligase, BL 72.6 22 0.00075 33.4 10.4 98 1-134 1-101 (425)
120 2woo_A ATPase GET3; tail-ancho 72.6 14 0.00047 33.5 8.5 41 5-45 19-60 (329)
121 3dfu_A Uncharacterized protein 72.5 13 0.00046 31.6 7.8 34 3-41 5-38 (232)
122 3zzm_A Bifunctional purine bio 72.3 23 0.00078 33.8 9.9 90 16-121 18-113 (523)
123 4grd_A N5-CAIR mutase, phospho 71.5 37 0.0013 27.1 10.1 145 271-438 11-164 (173)
124 3o1l_A Formyltetrahydrofolate 69.8 37 0.0013 30.2 10.3 105 3-141 104-213 (302)
125 4a1f_A DNAB helicase, replicat 69.7 6.5 0.00022 35.8 5.6 42 6-47 48-89 (338)
126 2pju_A Propionate catabolism o 69.7 19 0.00065 30.5 8.2 41 92-139 140-180 (225)
127 4ds3_A Phosphoribosylglycinami 68.8 16 0.00053 30.6 7.3 104 4-141 7-118 (209)
128 1xmp_A PURE, phosphoribosylami 67.5 45 0.0016 26.5 11.2 145 272-440 11-165 (170)
129 2lpm_A Two-component response 67.4 4.1 0.00014 30.9 3.2 38 97-138 44-86 (123)
130 1qzu_A Hypothetical protein MD 67.3 4.2 0.00014 34.1 3.5 46 4-50 19-65 (206)
131 3rg8_A Phosphoribosylaminoimid 66.9 39 0.0013 26.7 8.7 139 273-437 3-149 (159)
132 3oow_A Phosphoribosylaminoimid 66.8 46 0.0016 26.4 10.8 144 273-441 6-160 (166)
133 1bg6_A N-(1-D-carboxylethyl)-L 66.6 4.2 0.00014 37.3 3.8 36 1-41 1-36 (359)
134 1yt5_A Inorganic polyphosphate 66.1 4.5 0.00015 35.3 3.7 52 349-420 42-96 (258)
135 3gi1_A LBP, laminin-binding pr 65.9 28 0.00095 30.7 8.8 80 32-139 178-259 (286)
136 3ezx_A MMCP 1, monomethylamine 65.7 10 0.00035 31.9 5.7 39 4-42 92-130 (215)
137 2vqe_B 30S ribosomal protein S 65.6 20 0.00068 30.9 7.4 33 109-141 157-191 (256)
138 2i2c_A Probable inorganic poly 65.5 4.4 0.00015 35.7 3.5 52 349-420 36-93 (272)
139 3ors_A N5-carboxyaminoimidazol 65.0 50 0.0017 26.1 9.1 140 273-437 4-154 (163)
140 3dhn_A NAD-dependent epimerase 65.0 7.4 0.00025 32.7 4.8 38 1-42 1-38 (227)
141 3n0v_A Formyltetrahydrofolate 64.8 38 0.0013 29.8 9.4 105 3-141 89-198 (286)
142 2r8r_A Sensor protein; KDPD, P 64.5 9.1 0.00031 32.5 5.0 39 4-42 6-44 (228)
143 2xxa_A Signal recognition part 64.1 30 0.001 32.6 9.2 39 6-44 102-141 (433)
144 3lou_A Formyltetrahydrofolate 64.0 55 0.0019 28.9 10.3 105 3-141 94-203 (292)
145 4b4o_A Epimerase family protei 63.8 8.1 0.00028 34.2 5.0 34 5-42 1-34 (298)
146 1id1_A Putative potassium chan 63.7 5.9 0.0002 31.1 3.7 33 4-41 3-35 (153)
147 1mio_A Nitrogenase molybdenum 63.6 24 0.00083 34.3 8.6 25 109-136 455-479 (533)
148 3lp6_A Phosphoribosylaminoimid 63.2 57 0.0019 26.1 11.0 138 273-437 8-156 (174)
149 3bgw_A DNAB-like replicative h 62.5 16 0.00055 34.7 7.0 40 6-45 199-238 (444)
150 3hn2_A 2-dehydropantoate 2-red 62.2 12 0.00041 33.6 5.9 40 5-50 3-42 (312)
151 2pn1_A Carbamoylphosphate synt 62.0 20 0.0007 32.1 7.5 33 4-42 4-38 (331)
152 2o1e_A YCDH; alpha-beta protei 62.0 45 0.0016 29.8 9.6 80 32-139 189-270 (312)
153 3pdi_B Nitrogenase MOFE cofact 61.5 31 0.001 32.9 8.8 85 5-136 314-398 (458)
154 3ghy_A Ketopantoate reductase 61.4 7.9 0.00027 35.2 4.6 42 4-50 3-44 (335)
155 3u7q_B Nitrogenase molybdenum- 61.0 68 0.0023 31.1 11.2 32 5-41 365-396 (523)
156 3to5_A CHEY homolog; alpha(5)b 60.6 11 0.00036 29.0 4.5 35 109-143 56-99 (134)
157 3hwr_A 2-dehydropantoate 2-red 60.3 9.1 0.00031 34.5 4.7 42 4-50 19-60 (318)
158 3sc4_A Short chain dehydrogena 60.2 41 0.0014 29.4 9.0 35 5-42 9-43 (285)
159 3gl9_A Response regulator; bet 60.0 14 0.00048 27.2 5.1 35 109-143 45-88 (122)
160 3ih5_A Electron transfer flavo 59.5 25 0.00085 29.6 7.0 105 6-136 5-120 (217)
161 4g81_D Putative hexonate dehyd 59.5 51 0.0017 28.4 9.2 34 5-41 9-42 (255)
162 3cky_A 2-hydroxymethyl glutara 58.8 11 0.00037 33.5 4.9 35 1-40 1-35 (301)
163 2pju_A Propionate catabolism o 58.7 16 0.00055 31.0 5.6 30 348-378 63-92 (225)
164 3gem_A Short chain dehydrogena 58.5 55 0.0019 28.1 9.4 34 6-42 28-61 (260)
165 4hcj_A THIJ/PFPI domain protei 58.1 19 0.00064 29.2 5.8 41 1-42 4-45 (177)
166 2dzd_A Pyruvate carboxylase; b 58.1 42 0.0014 31.8 9.3 33 6-43 8-40 (461)
167 3i83_A 2-dehydropantoate 2-red 57.9 14 0.00047 33.3 5.5 40 5-50 3-42 (320)
168 1xrs_B D-lysine 5,6-aminomutas 57.3 22 0.00075 30.9 6.3 40 3-42 119-167 (262)
169 3n7t_A Macrophage binding prot 57.2 25 0.00087 30.2 6.8 38 4-41 9-57 (247)
170 2yvq_A Carbamoyl-phosphate syn 57.0 35 0.0012 26.4 7.0 96 8-136 27-130 (143)
171 3nrb_A Formyltetrahydrofolate 56.6 45 0.0015 29.4 8.4 108 3-141 87-197 (287)
172 3lyl_A 3-oxoacyl-(acyl-carrier 56.6 72 0.0025 26.9 9.8 36 4-42 4-39 (247)
173 1z7e_A Protein aRNA; rossmann 56.3 14 0.00048 37.2 5.8 96 5-142 1-108 (660)
174 1u0t_A Inorganic polyphosphate 56.1 6.7 0.00023 35.2 3.0 28 349-376 76-107 (307)
175 1efp_B ETF, protein (electron 55.8 76 0.0026 27.3 9.6 32 109-140 112-149 (252)
176 3ouz_A Biotin carboxylase; str 55.8 35 0.0012 32.2 8.2 33 6-43 8-40 (446)
177 3obi_A Formyltetrahydrofolate 55.3 43 0.0015 29.6 8.0 104 3-141 88-198 (288)
178 1qgu_B Protein (nitrogenase mo 55.3 57 0.0019 31.6 9.6 25 109-136 433-464 (519)
179 2gk4_A Conserved hypothetical 55.0 17 0.00057 31.0 5.1 26 15-42 28-53 (232)
180 3tl4_X Glutaminyl-tRNA synthet 54.7 22 0.00074 29.1 5.5 64 382-455 103-177 (187)
181 3ged_A Short-chain dehydrogena 54.4 44 0.0015 28.7 7.8 33 6-41 3-35 (247)
182 2lnd_A De novo designed protei 54.3 19 0.00064 24.3 4.1 50 366-419 49-100 (112)
183 4ehi_A Bifunctional purine bio 54.2 23 0.00078 33.9 6.2 48 5-67 25-72 (534)
184 2ixd_A LMBE-related protein; h 53.7 50 0.0017 28.2 8.1 35 5-39 4-38 (242)
185 3llv_A Exopolyphosphatase-rela 53.6 9 0.00031 29.4 3.1 34 4-42 6-39 (141)
186 3trh_A Phosphoribosylaminoimid 52.8 86 0.0029 25.0 8.9 141 273-437 7-157 (169)
187 1pq4_A Periplasmic binding pro 52.8 99 0.0034 27.2 10.1 80 33-142 190-271 (291)
188 1lss_A TRK system potassium up 52.4 13 0.00045 28.1 3.9 33 4-41 4-36 (140)
189 4e12_A Diketoreductase; oxidor 52.4 13 0.00043 32.8 4.2 36 1-41 1-36 (283)
190 2zki_A 199AA long hypothetical 52.2 15 0.0005 30.2 4.4 40 1-41 1-41 (199)
191 2ehd_A Oxidoreductase, oxidore 52.2 21 0.00074 30.0 5.6 38 1-41 1-38 (234)
192 1qkk_A DCTD, C4-dicarboxylate 52.2 54 0.0018 25.0 7.6 63 366-434 73-135 (155)
193 2q5c_A NTRC family transcripti 52.2 14 0.00049 30.5 4.2 37 347-384 50-86 (196)
194 2j37_W Signal recognition part 51.8 58 0.002 31.4 8.9 39 6-44 103-141 (504)
195 2zts_A Putative uncharacterize 51.5 57 0.0019 27.5 8.3 42 6-47 32-74 (251)
196 3afo_A NADH kinase POS5; alpha 51.2 10 0.00035 35.2 3.4 52 349-420 115-171 (388)
197 1o4v_A Phosphoribosylaminoimid 51.1 96 0.0033 25.0 14.1 141 272-438 13-163 (183)
198 2g1u_A Hypothetical protein TM 51.1 18 0.00063 28.2 4.6 34 4-42 19-52 (155)
199 3t6k_A Response regulator rece 51.1 24 0.00082 26.5 5.2 35 109-143 47-90 (136)
200 1p9o_A Phosphopantothenoylcyst 51.0 11 0.00037 33.8 3.5 39 5-43 37-90 (313)
201 3pfn_A NAD kinase; structural 50.7 8.9 0.0003 35.2 2.9 54 348-421 108-165 (365)
202 3mc3_A DSRE/DSRF-like family p 50.6 32 0.0011 26.2 5.8 43 5-47 16-61 (134)
203 4gbj_A 6-phosphogluconate dehy 50.5 17 0.00059 32.3 4.8 32 1-39 4-35 (297)
204 2r85_A PURP protein PF1517; AT 50.0 16 0.00055 32.8 4.6 34 4-43 2-35 (334)
205 1j8m_F SRP54, signal recogniti 50.0 89 0.0031 27.6 9.4 39 6-44 100-138 (297)
206 3kkl_A Probable chaperone prot 50.0 29 0.001 29.8 6.0 38 4-41 3-51 (244)
207 2gt1_A Lipopolysaccharide hept 50.0 68 0.0023 28.5 8.9 98 5-140 179-281 (326)
208 3fwz_A Inner membrane protein 49.8 9.6 0.00033 29.4 2.6 33 5-42 8-40 (140)
209 1ulz_A Pyruvate carboxylase N- 49.8 67 0.0023 30.3 9.2 35 1-42 1-35 (451)
210 1g3q_A MIND ATPase, cell divis 49.8 17 0.00059 30.6 4.6 37 6-42 3-41 (237)
211 2w70_A Biotin carboxylase; lig 49.8 39 0.0013 31.9 7.4 34 1-41 1-34 (449)
212 2nly_A BH1492 protein, diverge 49.8 1.2E+02 0.0042 25.9 10.0 39 92-136 114-155 (245)
213 4e21_A 6-phosphogluconate dehy 49.7 13 0.00043 34.3 3.8 36 1-41 19-54 (358)
214 4egb_A DTDP-glucose 4,6-dehydr 49.6 82 0.0028 28.1 9.5 32 5-40 25-58 (346)
215 4fn4_A Short chain dehydrogena 49.4 68 0.0023 27.6 8.3 34 5-41 7-40 (254)
216 3f6p_A Transcriptional regulat 49.0 28 0.00096 25.3 5.2 35 109-143 45-85 (120)
217 1qyd_A Pinoresinol-lariciresin 48.9 19 0.00065 31.9 4.9 38 1-42 1-38 (313)
218 2q6t_A DNAB replication FORK h 48.5 22 0.00075 33.7 5.4 40 6-45 202-242 (444)
219 3eag_A UDP-N-acetylmuramate:L- 48.3 35 0.0012 30.7 6.5 33 4-40 4-36 (326)
220 3cx3_A Lipoprotein; zinc-bindi 48.2 45 0.0015 29.3 7.1 79 32-138 176-256 (284)
221 2ew2_A 2-dehydropantoate 2-red 48.1 20 0.00069 31.8 4.9 42 4-50 3-45 (316)
222 3qha_A Putative oxidoreductase 48.0 13 0.00044 33.0 3.6 35 3-42 14-48 (296)
223 3l8h_A Putative haloacid dehal 47.8 73 0.0025 25.1 8.0 23 21-43 32-54 (179)
224 3kjh_A CO dehydrogenase/acetyl 47.8 12 0.00041 32.0 3.2 39 5-43 1-39 (254)
225 3t7c_A Carveol dehydrogenase; 47.1 80 0.0028 27.7 8.7 33 6-41 29-61 (299)
226 3m6m_D Sensory/regulatory prot 47.0 22 0.00077 27.0 4.5 34 109-142 57-101 (143)
227 2qyt_A 2-dehydropantoate 2-red 46.9 13 0.00044 33.2 3.4 44 1-49 4-54 (317)
228 4b4k_A N5-carboxyaminoimidazol 46.8 1.1E+02 0.0038 24.6 11.8 144 272-439 22-175 (181)
229 3obb_A Probable 3-hydroxyisobu 46.7 22 0.00076 31.6 4.9 31 5-40 4-34 (300)
230 3kvo_A Hydroxysteroid dehydrog 46.3 92 0.0032 28.2 9.1 34 6-42 46-79 (346)
231 3bbn_B Ribosomal protein S2; s 46.1 1.4E+02 0.0046 25.3 9.7 32 110-141 157-190 (231)
232 1mio_B Nitrogenase molybdenum 45.9 78 0.0027 30.0 8.8 26 109-137 384-409 (458)
233 3doj_A AT3G25530, dehydrogenas 45.6 22 0.00075 31.7 4.7 34 3-41 20-53 (310)
234 4hb9_A Similarities with proba 45.5 14 0.00049 34.2 3.6 29 5-38 2-30 (412)
235 3mjf_A Phosphoribosylamine--gl 45.5 50 0.0017 31.0 7.4 25 4-33 3-27 (431)
236 1b93_A Protein (methylglyoxal 45.5 78 0.0027 24.8 7.1 95 4-136 11-118 (152)
237 3ius_A Uncharacterized conserv 45.4 43 0.0015 29.0 6.6 34 5-43 6-39 (286)
238 3ksu_A 3-oxoacyl-acyl carrier 45.4 86 0.0029 26.8 8.5 32 6-40 12-43 (262)
239 1jx7_A Hypothetical protein YC 45.0 34 0.0012 25.0 5.1 43 6-48 3-50 (117)
240 4da9_A Short-chain dehydrogena 44.6 86 0.0029 27.2 8.4 33 5-40 29-61 (280)
241 2vpq_A Acetyl-COA carboxylase; 44.2 51 0.0018 31.1 7.3 32 6-42 3-34 (451)
242 2h31_A Multifunctional protein 43.8 2.1E+02 0.007 26.8 11.0 140 272-437 265-412 (425)
243 1evy_A Glycerol-3-phosphate de 43.7 9.2 0.00031 35.2 1.9 32 5-41 16-47 (366)
244 3hbl_A Pyruvate carboxylase; T 43.6 1.1E+02 0.0038 33.0 10.3 102 1-135 1-106 (1150)
245 4imr_A 3-oxoacyl-(acyl-carrier 43.5 1.4E+02 0.0047 25.8 9.6 34 6-42 34-67 (275)
246 1q57_A DNA primase/helicase; d 43.2 92 0.0032 29.9 9.1 42 6-47 244-286 (503)
247 2c29_D Dihydroflavonol 4-reduc 43.2 23 0.00079 31.8 4.6 38 1-41 1-38 (337)
248 2xj4_A MIPZ; replication, cell 43.1 26 0.00089 30.8 4.8 39 4-42 3-43 (286)
249 3g1w_A Sugar ABC transporter; 42.9 1.6E+02 0.0056 25.4 10.6 38 1-38 1-40 (305)
250 1ooe_A Dihydropteridine reduct 42.8 30 0.001 29.2 5.0 34 6-42 4-37 (236)
251 2an1_A Putative kinase; struct 42.7 12 0.00042 33.1 2.5 28 349-376 64-95 (292)
252 4ibo_A Gluconate dehydrogenase 42.6 1.3E+02 0.0043 25.9 9.2 33 6-41 27-59 (271)
253 1u7z_A Coenzyme A biosynthesis 42.5 31 0.0011 29.2 4.8 23 20-42 36-58 (226)
254 2hy5_A Putative sulfurtransfer 42.5 36 0.0012 25.7 4.9 42 6-47 2-47 (130)
255 3orf_A Dihydropteridine reduct 42.5 29 0.001 29.6 4.9 34 6-42 23-56 (251)
256 3m1a_A Putative dehydrogenase; 42.3 32 0.0011 29.9 5.2 39 1-42 1-39 (281)
257 1hyq_A MIND, cell division inh 42.0 23 0.00079 30.5 4.2 37 6-42 4-41 (263)
258 4dll_A 2-hydroxy-3-oxopropiona 42.0 30 0.001 31.0 5.1 33 4-41 31-63 (320)
259 4e5s_A MCCFLIKE protein (BA_56 41.9 28 0.00094 31.5 4.7 72 286-376 63-136 (331)
260 3bul_A Methionine synthase; tr 41.5 34 0.0012 33.6 5.5 39 4-42 98-136 (579)
261 1dbw_A Transcriptional regulat 41.4 46 0.0016 24.3 5.4 34 109-142 46-86 (126)
262 1qyc_A Phenylcoumaran benzylic 41.3 26 0.00088 30.9 4.5 38 1-42 1-38 (308)
263 2fb6_A Conserved hypothetical 41.3 36 0.0012 25.3 4.5 45 1-45 4-52 (117)
264 3dii_A Short-chain dehydrogena 41.2 29 0.001 29.6 4.7 33 6-41 3-35 (247)
265 1ks9_A KPA reductase;, 2-dehyd 41.2 21 0.00073 31.2 3.9 33 5-42 1-33 (291)
266 3p32_A Probable GTPase RV1496/ 41.0 1.2E+02 0.0042 27.4 9.1 40 5-44 80-119 (355)
267 3dme_A Conserved exported prot 40.9 17 0.00057 33.1 3.2 36 1-41 1-36 (369)
268 3kl4_A SRP54, signal recogniti 40.8 98 0.0034 29.1 8.5 40 5-44 97-137 (433)
269 1eiw_A Hypothetical protein MT 40.5 43 0.0015 24.6 4.7 63 346-419 38-109 (111)
270 2r6a_A DNAB helicase, replicat 40.5 78 0.0027 29.9 7.9 40 6-45 205-245 (454)
271 3c3m_A Response regulator rece 40.3 43 0.0015 25.0 5.1 33 109-141 46-87 (138)
272 3pnx_A Putative sulfurtransfer 40.0 51 0.0017 26.1 5.4 50 1-50 2-51 (160)
273 3gt7_A Sensor protein; structu 39.3 43 0.0015 25.7 5.1 34 109-142 50-92 (154)
274 3gpi_A NAD-dependent epimerase 39.0 38 0.0013 29.4 5.2 34 4-42 3-36 (286)
275 3i4f_A 3-oxoacyl-[acyl-carrier 38.9 46 0.0016 28.5 5.6 35 4-41 6-40 (264)
276 2vo1_A CTP synthase 1; pyrimid 38.6 32 0.0011 29.8 4.2 42 4-45 22-66 (295)
277 4g6h_A Rotenone-insensitive NA 38.5 15 0.0005 35.6 2.5 35 3-42 41-75 (502)
278 3l77_A Short-chain alcohol deh 38.5 37 0.0013 28.5 4.9 34 5-41 2-35 (235)
279 2raf_A Putative dinucleotide-b 38.4 27 0.00091 29.0 3.8 33 4-41 19-51 (209)
280 1c0p_A D-amino acid oxidase; a 38.3 27 0.00092 31.8 4.2 35 1-40 3-37 (363)
281 2ewd_A Lactate dehydrogenase,; 38.2 18 0.00062 32.4 2.9 37 1-42 1-38 (317)
282 3p9x_A Phosphoribosylglycinami 38.2 1.7E+02 0.0059 24.2 11.5 103 5-141 3-113 (211)
283 2qs7_A Uncharacterized protein 38.2 42 0.0014 26.0 4.7 44 6-49 9-53 (144)
284 3grc_A Sensor protein, kinase; 37.8 58 0.002 24.2 5.6 34 109-142 49-91 (140)
285 1wcv_1 SOJ, segregation protei 37.8 26 0.00088 30.2 3.8 41 4-44 5-47 (257)
286 2ph1_A Nucleotide-binding prot 37.5 40 0.0014 29.0 5.0 40 5-44 18-59 (262)
287 3nhm_A Response regulator; pro 37.4 63 0.0022 23.6 5.7 33 109-141 46-87 (133)
288 3a10_A Response regulator; pho 37.2 65 0.0022 22.8 5.6 33 109-141 44-83 (116)
289 3qlj_A Short chain dehydrogena 37.2 1.8E+02 0.0062 25.7 9.5 32 6-40 28-59 (322)
290 4fgs_A Probable dehydrogenase 37.1 43 0.0015 29.3 5.0 34 5-41 29-62 (273)
291 3s40_A Diacylglycerol kinase; 37.1 40 0.0014 29.9 5.0 81 274-377 12-98 (304)
292 2jk1_A HUPR, hydrogenase trans 37.1 1.1E+02 0.0038 22.5 7.1 61 367-432 71-131 (139)
293 3dqz_A Alpha-hydroxynitrIle ly 37.0 28 0.00097 29.1 4.0 41 1-42 1-41 (258)
294 2ffh_A Protein (FFH); SRP54, s 37.0 1.8E+02 0.0063 27.1 9.7 38 7-44 101-138 (425)
295 3l4b_C TRKA K+ channel protien 36.9 13 0.00045 31.1 1.7 32 6-42 2-33 (218)
296 1z82_A Glycerol-3-phosphate de 36.7 25 0.00087 31.7 3.7 41 5-50 15-56 (335)
297 2q3e_A UDP-glucose 6-dehydroge 36.6 32 0.0011 32.9 4.5 36 1-41 2-39 (467)
298 4dgk_A Phytoene dehydrogenase; 36.6 15 0.00053 35.2 2.3 29 6-39 3-31 (501)
299 1cp2_A CP2, nitrogenase iron p 36.3 31 0.0011 29.8 4.1 37 6-42 3-39 (269)
300 3eod_A Protein HNR; response r 36.3 52 0.0018 24.0 5.0 35 109-143 50-91 (130)
301 3imf_A Short chain dehydrogena 36.3 45 0.0015 28.5 5.1 33 6-41 7-39 (257)
302 4fs3_A Enoyl-[acyl-carrier-pro 36.1 52 0.0018 28.2 5.5 36 5-41 6-41 (256)
303 1tmy_A CHEY protein, TMY; chem 36.0 49 0.0017 23.7 4.7 35 109-143 46-87 (120)
304 3kuu_A Phosphoribosylaminoimid 36.0 1.7E+02 0.0057 23.4 12.3 145 274-441 14-167 (174)
305 1hdo_A Biliverdin IX beta redu 36.0 81 0.0028 25.4 6.5 37 1-42 1-37 (206)
306 2rjn_A Response regulator rece 35.8 55 0.0019 24.9 5.2 34 109-142 50-90 (154)
307 4e7p_A Response regulator; DNA 35.7 61 0.0021 24.6 5.4 43 96-142 56-105 (150)
308 3uhj_A Probable glycerol dehyd 35.7 74 0.0025 29.4 6.7 92 23-140 43-139 (387)
309 1q74_A 1D-MYO-inosityl 2-aceta 35.6 43 0.0015 29.8 4.9 40 1-40 1-40 (303)
310 2w36_A Endonuclease V; hypoxan 35.6 66 0.0023 27.1 5.7 40 98-139 93-139 (225)
311 2yrx_A Phosphoribosylglycinami 35.4 1.5E+02 0.0051 27.8 9.1 34 2-40 19-53 (451)
312 1zgz_A Torcad operon transcrip 35.4 59 0.002 23.4 5.1 34 109-142 45-84 (122)
313 3b2n_A Uncharacterized protein 35.4 48 0.0017 24.5 4.7 42 96-141 39-87 (133)
314 3hv2_A Response regulator/HD d 35.3 58 0.002 24.8 5.3 35 109-143 57-98 (153)
315 1g8m_A Aicar transformylase-IM 35.3 69 0.0024 31.1 6.4 101 1-121 1-107 (593)
316 4huj_A Uncharacterized protein 35.2 17 0.00059 30.5 2.1 31 4-39 23-53 (220)
317 1gsa_A Glutathione synthetase; 35.0 40 0.0014 29.7 4.8 37 5-41 2-41 (316)
318 1y56_B Sarcosine oxidase; dehy 35.0 23 0.00077 32.5 3.1 33 4-41 5-37 (382)
319 4e5v_A Putative THUA-like prot 35.0 46 0.0016 29.2 4.9 38 3-41 3-43 (281)
320 1geg_A Acetoin reductase; SDR 34.7 43 0.0015 28.7 4.7 34 6-42 3-36 (256)
321 3l7i_A Teichoic acid biosynthe 34.7 17 0.00057 37.2 2.3 110 336-456 605-719 (729)
322 3ego_A Probable 2-dehydropanto 34.6 37 0.0013 30.2 4.3 40 5-50 3-43 (307)
323 1pno_A NAD(P) transhydrogenase 34.6 45 0.0015 26.4 4.1 38 4-41 23-63 (180)
324 3ic5_A Putative saccharopine d 34.5 35 0.0012 24.7 3.6 33 5-42 6-39 (118)
325 2qzj_A Two-component response 34.5 55 0.0019 24.3 4.9 34 109-142 47-86 (136)
326 2qxy_A Response regulator; reg 34.5 61 0.0021 24.1 5.2 41 95-140 37-84 (142)
327 1u11_A PURE (N5-carboxyaminoim 34.3 1.8E+02 0.0062 23.4 11.5 145 273-441 22-176 (182)
328 2xed_A Putative maleate isomer 34.1 2.3E+02 0.0078 24.5 9.3 92 21-136 134-238 (273)
329 3g79_A NDP-N-acetyl-D-galactos 34.1 40 0.0014 32.3 4.7 37 2-43 16-54 (478)
330 3crn_A Response regulator rece 33.9 67 0.0023 23.6 5.3 41 96-140 37-84 (132)
331 1xhf_A DYE resistance, aerobic 33.9 72 0.0025 22.9 5.4 34 109-142 46-85 (123)
332 3kcn_A Adenylate cyclase homol 33.8 1.1E+02 0.0039 22.9 6.8 64 366-435 74-139 (151)
333 1d4o_A NADP(H) transhydrogenas 33.8 47 0.0016 26.4 4.1 37 5-41 23-62 (184)
334 3guy_A Short-chain dehydrogena 33.7 34 0.0012 28.7 3.8 34 6-42 2-35 (230)
335 2ca5_A MXIH; transport protein 33.7 88 0.003 21.5 4.9 48 407-458 27-81 (85)
336 3cu5_A Two component transcrip 33.7 61 0.0021 24.3 5.1 32 109-140 48-86 (141)
337 3h7a_A Short chain dehydrogena 33.7 55 0.0019 27.9 5.2 35 5-42 7-41 (252)
338 1iow_A DD-ligase, DDLB, D-ALA\ 33.5 60 0.002 28.5 5.6 37 5-41 3-43 (306)
339 3hr8_A Protein RECA; alpha and 33.5 15 0.00053 33.6 1.6 37 7-43 64-100 (356)
340 1fjh_A 3alpha-hydroxysteroid d 33.5 56 0.0019 27.7 5.3 32 6-40 2-33 (257)
341 2rir_A Dipicolinate synthase, 33.4 57 0.0019 28.8 5.4 34 1-39 4-37 (300)
342 1mxh_A Pteridine reductase 2; 33.3 47 0.0016 28.7 4.8 32 6-40 12-43 (276)
343 1srr_A SPO0F, sporulation resp 33.2 51 0.0017 23.9 4.4 34 109-142 46-86 (124)
344 3l4e_A Uncharacterized peptida 33.2 1.3E+02 0.0045 24.8 7.3 35 4-38 27-63 (206)
345 3hyw_A Sulfide-quinone reducta 33.1 25 0.00087 33.0 3.2 35 1-42 1-37 (430)
346 2a9o_A Response regulator; ess 32.9 62 0.0021 23.0 4.8 34 109-142 44-83 (120)
347 2gdz_A NAD+-dependent 15-hydro 32.8 66 0.0023 27.6 5.7 33 6-41 8-40 (267)
348 3pdu_A 3-hydroxyisobutyrate de 32.8 36 0.0012 29.9 3.9 32 6-42 3-34 (287)
349 2l82_A Designed protein OR32; 32.7 88 0.003 22.4 5.0 34 274-311 3-36 (162)
350 3kht_A Response regulator; PSI 32.7 82 0.0028 23.5 5.7 42 95-140 40-90 (144)
351 2qv7_A Diacylglycerol kinase D 32.6 87 0.003 28.2 6.6 82 274-377 28-115 (337)
352 1txg_A Glycerol-3-phosphate de 32.6 35 0.0012 30.6 3.9 31 5-40 1-31 (335)
353 2afh_E Nitrogenase iron protei 32.5 40 0.0014 29.5 4.3 37 6-42 4-40 (289)
354 1oi4_A Hypothetical protein YH 32.4 1.1E+02 0.0036 24.9 6.5 39 3-42 22-60 (193)
355 3qvl_A Putative hydantoin race 32.4 1.6E+02 0.0055 25.0 7.9 29 109-137 68-97 (245)
356 4h1h_A LMO1638 protein; MCCF-l 32.2 42 0.0014 30.2 4.3 62 286-366 63-124 (327)
357 2pl1_A Transcriptional regulat 32.2 82 0.0028 22.4 5.4 34 109-142 43-83 (121)
358 3goc_A Endonuclease V; alpha-b 32.1 63 0.0022 27.4 5.0 30 109-138 106-142 (237)
359 4e08_A DJ-1 beta; flavodoxin-l 32.1 1E+02 0.0034 24.9 6.4 36 6-42 7-42 (190)
360 3rqi_A Response regulator prot 32.1 49 0.0017 26.4 4.4 43 97-143 42-91 (184)
361 2hy5_B Intracellular sulfur ox 32.0 64 0.0022 24.6 4.7 42 6-47 7-51 (136)
362 3rkr_A Short chain oxidoreduct 31.8 62 0.0021 27.7 5.3 34 6-42 30-63 (262)
363 3qsg_A NAD-binding phosphogluc 31.8 35 0.0012 30.5 3.7 33 4-41 24-57 (312)
364 3nrc_A Enoyl-[acyl-carrier-pro 31.7 81 0.0028 27.3 6.1 36 6-43 27-63 (280)
365 3of5_A Dethiobiotin synthetase 31.7 46 0.0016 28.1 4.2 35 4-38 3-39 (228)
366 3i42_A Response regulator rece 31.7 54 0.0018 23.8 4.3 33 109-141 46-87 (127)
367 2fsv_C NAD(P) transhydrogenase 31.6 52 0.0018 26.7 4.1 37 5-41 47-86 (203)
368 3l6e_A Oxidoreductase, short-c 31.5 56 0.0019 27.5 4.8 34 6-42 4-37 (235)
369 1x1t_A D(-)-3-hydroxybutyrate 31.4 60 0.0021 27.7 5.1 34 6-42 5-38 (260)
370 3dfz_A SIRC, precorrin-2 dehyd 31.3 2.3E+02 0.0079 23.7 11.5 143 271-436 31-185 (223)
371 3sr3_A Microcin immunity prote 31.3 40 0.0014 30.5 4.0 72 286-376 64-137 (336)
372 1p6q_A CHEY2; chemotaxis, sign 31.3 69 0.0023 23.3 4.9 34 109-142 50-92 (129)
373 1ehi_A LMDDL2, D-alanine:D-lac 31.2 43 0.0015 30.8 4.4 40 1-41 1-45 (377)
374 3s2u_A UDP-N-acetylglucosamine 31.2 63 0.0021 29.5 5.4 27 346-374 92-121 (365)
375 2qv5_A AGR_C_5032P, uncharacte 31.2 1.5E+02 0.005 25.7 7.3 39 92-136 141-182 (261)
376 2qq5_A DHRS1, dehydrogenase/re 31.1 65 0.0022 27.5 5.3 33 6-41 6-38 (260)
377 1z0s_A Probable inorganic poly 31.1 19 0.00064 31.7 1.7 28 349-376 69-99 (278)
378 3c24_A Putative oxidoreductase 31.1 41 0.0014 29.4 4.0 32 5-41 12-44 (286)
379 2ab0_A YAJL; DJ-1/THIJ superfa 30.9 99 0.0034 25.3 6.2 36 6-42 4-39 (205)
380 3o26_A Salutaridine reductase; 30.9 57 0.0019 28.6 5.0 35 5-42 12-46 (311)
381 1mb3_A Cell division response 30.9 57 0.002 23.5 4.4 33 109-141 44-85 (124)
382 3a4m_A L-seryl-tRNA(SEC) kinas 30.9 48 0.0017 28.5 4.4 41 1-41 1-41 (260)
383 1djl_A Transhydrogenase DIII; 30.9 54 0.0018 26.7 4.1 37 5-41 46-85 (207)
384 3v2h_A D-beta-hydroxybutyrate 30.9 52 0.0018 28.7 4.6 32 6-40 26-57 (281)
385 2h78_A Hibadh, 3-hydroxyisobut 30.8 44 0.0015 29.5 4.2 33 4-41 3-35 (302)
386 3ppi_A 3-hydroxyacyl-COA dehyd 30.8 66 0.0023 27.9 5.3 34 5-41 30-63 (281)
387 2xw6_A MGS, methylglyoxal synt 30.8 82 0.0028 24.0 5.0 95 4-136 3-110 (134)
388 4g65_A TRK system potassium up 30.8 13 0.00045 35.5 0.7 35 3-42 2-36 (461)
389 3hh8_A Metal ABC transporter s 30.7 1E+02 0.0035 27.1 6.5 74 34-135 184-259 (294)
390 3ucx_A Short chain dehydrogena 30.7 70 0.0024 27.4 5.4 33 6-41 12-44 (264)
391 3enk_A UDP-glucose 4-epimerase 30.7 81 0.0028 28.1 6.1 37 1-41 2-38 (341)
392 3h4t_A Glycosyltransferase GTF 30.6 1.5E+02 0.005 27.3 8.0 37 6-42 222-259 (404)
393 3k96_A Glycerol-3-phosphate de 30.5 30 0.001 31.7 3.0 42 4-50 29-71 (356)
394 3l3b_A ES1 family protein; ssg 30.5 1.1E+02 0.0037 26.1 6.4 37 6-42 25-65 (242)
395 1o97_C Electron transferring f 30.4 56 0.0019 28.4 4.6 32 109-140 111-148 (264)
396 1u0t_A Inorganic polyphosphate 30.3 49 0.0017 29.5 4.4 40 1-40 1-41 (307)
397 3s55_A Putative short-chain de 30.3 59 0.002 28.2 4.9 34 5-41 10-43 (281)
398 2prs_A High-affinity zinc upta 30.2 66 0.0023 28.2 5.2 41 93-137 210-252 (284)
399 3g0o_A 3-hydroxyisobutyrate de 30.2 31 0.001 30.6 3.0 33 4-41 7-39 (303)
400 3icc_A Putative 3-oxoacyl-(acy 30.2 80 0.0027 26.7 5.7 32 6-40 8-39 (255)
401 2ekp_A 2-deoxy-D-gluconate 3-d 30.1 62 0.0021 27.2 4.9 34 6-42 3-36 (239)
402 1zem_A Xylitol dehydrogenase; 30.1 64 0.0022 27.6 5.1 33 6-41 8-40 (262)
403 3end_A Light-independent proto 30.1 55 0.0019 28.9 4.7 39 4-42 40-79 (307)
404 1dhr_A Dihydropteridine reduct 30.1 60 0.0021 27.4 4.8 34 6-42 8-41 (241)
405 3euw_A MYO-inositol dehydrogen 30.0 2.2E+02 0.0076 25.4 9.0 107 274-398 7-122 (344)
406 3m2t_A Probable dehydrogenase; 29.9 1.2E+02 0.0042 27.4 7.2 60 337-397 57-124 (359)
407 2d1p_B TUSC, hypothetical UPF0 29.9 98 0.0034 22.8 5.4 40 6-45 3-45 (119)
408 1f0y_A HCDH, L-3-hydroxyacyl-C 29.8 32 0.0011 30.5 3.1 32 5-41 16-47 (302)
409 4eg0_A D-alanine--D-alanine li 29.7 78 0.0027 28.1 5.7 38 5-42 14-55 (317)
410 4hn9_A Iron complex transport 29.7 46 0.0016 29.9 4.2 32 109-140 115-146 (335)
411 4hp8_A 2-deoxy-D-gluconate 3-d 29.7 98 0.0034 26.5 6.0 35 5-42 9-43 (247)
412 3cz5_A Two-component response 29.6 97 0.0033 23.4 5.7 34 109-142 50-90 (153)
413 1rw7_A YDR533CP; alpha-beta sa 29.6 1.1E+02 0.0037 26.0 6.4 39 4-42 3-52 (243)
414 1t2d_A LDH-P, L-lactate dehydr 29.5 34 0.0012 30.7 3.2 36 1-41 1-37 (322)
415 4dqx_A Probable oxidoreductase 29.5 69 0.0023 27.8 5.2 34 5-41 27-60 (277)
416 1qv9_A F420-dependent methylen 29.5 89 0.003 26.4 5.3 35 109-143 63-103 (283)
417 1e7w_A Pteridine reductase; di 29.5 63 0.0021 28.3 5.0 33 6-41 10-43 (291)
418 1zmt_A Haloalcohol dehalogenas 29.5 43 0.0015 28.6 3.8 33 6-41 2-34 (254)
419 3qrx_B Melittin; calcium-bindi 29.4 15 0.0005 18.4 0.4 17 357-373 1-17 (26)
420 1jay_A Coenzyme F420H2:NADP+ o 29.3 43 0.0015 27.6 3.7 32 5-41 1-33 (212)
421 1u9c_A APC35852; structural ge 29.3 1.2E+02 0.004 25.2 6.5 37 6-42 7-52 (224)
422 2c5m_A CTP synthase; cytidine 29.2 36 0.0012 29.3 3.0 41 4-44 22-65 (294)
423 3pxx_A Carveol dehydrogenase; 29.2 66 0.0023 27.9 5.1 34 5-41 10-43 (287)
424 1ydg_A Trp repressor binding p 29.2 75 0.0026 26.1 5.2 38 3-40 5-43 (211)
425 2x5n_A SPRPN10, 26S proteasome 29.2 80 0.0028 25.7 5.2 36 6-41 108-144 (192)
426 2uyy_A N-PAC protein; long-cha 29.2 45 0.0015 29.7 4.0 33 4-41 30-62 (316)
427 1ihu_A Arsenical pump-driving 29.1 50 0.0017 32.5 4.7 40 4-43 7-47 (589)
428 3oti_A CALG3; calicheamicin, T 29.1 2.6E+02 0.0089 25.3 9.5 89 6-137 233-325 (398)
429 3lk7_A UDP-N-acetylmuramoylala 29.0 1E+02 0.0034 29.2 6.6 32 4-40 9-40 (451)
430 2gkg_A Response regulator homo 29.0 75 0.0026 22.8 4.8 48 366-420 78-125 (127)
431 3pef_A 6-phosphogluconate dehy 29.0 49 0.0017 29.0 4.1 32 5-41 2-33 (287)
432 3op4_A 3-oxoacyl-[acyl-carrier 29.0 79 0.0027 26.8 5.4 35 5-42 9-43 (248)
433 4eue_A Putative reductase CA_C 28.8 1.5E+02 0.0051 27.7 7.5 36 5-41 60-95 (418)
434 4iin_A 3-ketoacyl-acyl carrier 28.8 76 0.0026 27.3 5.4 34 5-41 29-62 (271)
435 2izz_A Pyrroline-5-carboxylate 28.8 32 0.0011 30.8 3.0 37 1-42 19-59 (322)
436 3qiv_A Short-chain dehydrogena 28.8 72 0.0025 27.0 5.2 34 5-41 9-42 (253)
437 3dtt_A NADP oxidoreductase; st 28.8 49 0.0017 28.2 4.0 34 4-42 19-52 (245)
438 1i36_A Conserved hypothetical 28.8 36 0.0012 29.3 3.2 31 5-40 1-31 (264)
439 1zu4_A FTSY; GTPase, signal re 28.7 3.1E+02 0.011 24.3 9.4 38 7-44 108-145 (320)
440 2etv_A Iron(III) ABC transport 28.7 43 0.0015 30.3 3.8 31 109-139 95-126 (346)
441 1uls_A Putative 3-oxoacyl-acyl 28.6 78 0.0027 26.8 5.3 33 6-41 6-38 (245)
442 2woj_A ATPase GET3; tail-ancho 28.6 45 0.0015 30.4 3.9 39 5-43 18-59 (354)
443 3vps_A TUNA, NAD-dependent epi 28.5 56 0.0019 28.8 4.6 34 5-42 8-41 (321)
444 2hmt_A YUAA protein; RCK, KTN, 28.4 32 0.0011 25.9 2.6 32 5-41 7-38 (144)
445 4h15_A Short chain alcohol deh 28.4 78 0.0027 27.3 5.2 34 5-41 11-44 (261)
446 3ea0_A ATPase, para family; al 28.3 42 0.0014 28.3 3.5 40 4-43 3-45 (245)
447 1efv_B Electron transfer flavo 28.2 65 0.0022 27.8 4.6 32 109-140 115-152 (255)
448 3q2i_A Dehydrogenase; rossmann 28.2 1.8E+02 0.0062 26.1 8.0 125 274-420 16-150 (354)
449 3t4x_A Oxidoreductase, short c 28.2 86 0.003 26.9 5.6 35 5-42 10-44 (267)
450 3md9_A Hemin-binding periplasm 28.1 59 0.002 27.7 4.5 30 109-138 58-89 (255)
451 2jk1_A HUPR, hydrogenase trans 28.1 84 0.0029 23.2 5.0 34 109-142 43-83 (139)
452 3zv4_A CIS-2,3-dihydrobiphenyl 28.1 78 0.0027 27.5 5.3 35 4-41 4-38 (281)
453 1zk4_A R-specific alcohol dehy 28.1 79 0.0027 26.6 5.3 34 6-42 7-40 (251)
454 2ew8_A (S)-1-phenylethanol deh 28.1 75 0.0026 26.9 5.1 34 6-42 8-41 (249)
455 2r6j_A Eugenol synthase 1; phe 28.0 70 0.0024 28.2 5.1 33 6-42 13-45 (318)
456 1vmd_A MGS, methylglyoxal synt 28.0 1E+02 0.0035 24.8 5.3 85 16-136 37-134 (178)
457 1zl0_A Hypothetical protein PA 28.0 63 0.0021 28.9 4.6 73 285-376 64-138 (311)
458 3sju_A Keto reductase; short-c 27.9 63 0.0022 28.1 4.7 34 6-42 25-58 (279)
459 1yb4_A Tartronic semialdehyde 27.9 56 0.0019 28.5 4.4 31 4-39 3-33 (295)
460 3c01_A Surface presentation of 27.9 1E+02 0.0036 18.6 4.1 31 406-436 2-32 (48)
461 2pd6_A Estradiol 17-beta-dehyd 27.9 70 0.0024 27.2 5.0 34 6-42 8-41 (264)
462 2bru_C NAD(P) transhydrogenase 27.8 52 0.0018 26.2 3.4 37 5-41 31-70 (186)
463 2bon_A Lipid kinase; DAG kinas 27.7 63 0.0021 29.1 4.7 41 1-41 26-66 (332)
464 2zat_A Dehydrogenase/reductase 27.7 93 0.0032 26.5 5.7 34 6-42 15-48 (260)
465 3sx6_A Sulfide-quinone reducta 27.6 61 0.0021 30.4 4.8 37 1-42 1-40 (437)
466 3ijr_A Oxidoreductase, short c 27.5 75 0.0026 27.8 5.1 34 6-42 48-81 (291)
467 2rjn_A Response regulator rece 27.5 33 0.0011 26.2 2.5 63 367-435 78-141 (154)
468 2q8p_A Iron-regulated surface 27.4 50 0.0017 28.2 3.9 31 109-139 59-90 (260)
469 3tfo_A Putative 3-oxoacyl-(acy 27.4 83 0.0029 27.1 5.3 33 6-41 5-37 (264)
470 1e4e_A Vancomycin/teicoplanin 27.3 36 0.0012 30.8 3.0 41 1-42 1-45 (343)
471 3gg2_A Sugar dehydrogenase, UD 27.3 46 0.0016 31.6 3.8 33 5-42 3-35 (450)
472 3r3s_A Oxidoreductase; structu 27.2 89 0.003 27.3 5.6 33 6-41 50-82 (294)
473 3l6d_A Putative oxidoreductase 27.2 32 0.0011 30.6 2.6 32 4-40 9-40 (306)
474 2cfc_A 2-(R)-hydroxypropyl-COM 27.2 84 0.0029 26.4 5.3 33 6-41 3-35 (250)
475 2p91_A Enoyl-[acyl-carrier-pro 27.2 97 0.0033 26.9 5.8 35 6-42 22-57 (285)
476 3u5t_A 3-oxoacyl-[acyl-carrier 27.1 75 0.0026 27.4 5.0 34 4-40 26-59 (267)
477 4e6p_A Probable sorbitol dehyd 27.1 78 0.0027 27.0 5.1 33 6-41 9-41 (259)
478 3gvc_A Oxidoreductase, probabl 27.0 91 0.0031 27.0 5.5 33 6-41 30-62 (277)
479 3f1l_A Uncharacterized oxidore 27.0 78 0.0027 26.9 5.0 33 6-41 13-45 (252)
480 3h2s_A Putative NADH-flavin re 27.0 52 0.0018 27.1 3.8 33 6-42 2-34 (224)
481 2dkn_A 3-alpha-hydroxysteroid 26.9 82 0.0028 26.5 5.2 32 7-41 3-34 (255)
482 2zbw_A Thioredoxin reductase; 26.8 37 0.0013 30.3 3.0 35 3-42 4-38 (335)
483 4eso_A Putative oxidoreductase 26.8 76 0.0026 27.1 4.9 33 6-41 9-41 (255)
484 1hxh_A 3BETA/17BETA-hydroxyste 26.7 80 0.0027 26.8 5.1 33 6-41 7-39 (253)
485 3abi_A Putative uncharacterize 26.7 3.5E+02 0.012 24.4 9.7 33 3-41 15-47 (365)
486 4hv4_A UDP-N-acetylmuramate--L 26.6 70 0.0024 30.7 5.1 31 4-38 22-52 (494)
487 3v8b_A Putative dehydrogenase, 26.6 75 0.0025 27.7 4.9 35 5-42 28-62 (283)
488 2a33_A Hypothetical protein; s 26.6 1.3E+02 0.0044 25.1 6.1 100 261-374 36-145 (215)
489 1g0o_A Trihydroxynaphthalene r 26.6 87 0.003 27.1 5.4 34 6-42 30-63 (283)
490 2q2v_A Beta-D-hydroxybutyrate 26.3 1.1E+02 0.0036 26.0 5.8 35 6-43 5-39 (255)
491 1gz6_A Estradiol 17 beta-dehyd 26.3 73 0.0025 28.4 4.9 31 6-39 10-40 (319)
492 3s8m_A Enoyl-ACP reductase; ro 26.3 1.8E+02 0.006 27.3 7.4 35 4-41 60-95 (422)
493 3q9s_A DNA-binding response re 26.2 94 0.0032 26.3 5.4 43 96-142 71-119 (249)
494 3c97_A Signal transduction his 26.2 1.1E+02 0.0036 22.7 5.2 31 109-139 53-95 (140)
495 3c85_A Putative glutathione-re 26.2 35 0.0012 27.4 2.5 33 5-42 40-73 (183)
496 3f67_A Putative dienelactone h 26.1 88 0.003 25.7 5.2 35 6-40 33-67 (241)
497 1yb1_A 17-beta-hydroxysteroid 26.1 79 0.0027 27.2 5.0 34 6-42 32-65 (272)
498 2qv0_A Protein MRKE; structura 26.1 1.2E+02 0.0041 22.4 5.6 32 109-140 54-92 (143)
499 3to5_A CHEY homolog; alpha(5)b 26.1 1.1E+02 0.0038 23.1 5.2 47 367-419 86-132 (134)
500 4gi5_A Quinone reductase; prot 26.0 1.1E+02 0.0038 26.7 5.8 37 3-39 21-60 (280)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.1e-67 Score=508.73 Aligned_cols=430 Identities=27% Similarity=0.444 Sum_probs=347.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCC--CEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHH
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHG--IKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLH 81 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rG--h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 81 (460)
+.||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+... ...++++|..+|++++++.....+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecCCCCCCCccccCChH
Confidence 57999999999999999999999999999 99999999877766644321 11357999999988876542222333
Q ss_pred HHHHHHHhhchHHHHHHHHHHhh-cCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhh-cC
Q 012594 82 KVRQSMLTVMPGCLRNLIEKVNK-SNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEA-GL 159 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~l~~-~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~~ 159 (460)
..+..+.+.+...+++.++.+.. .. .++|+||+|.++.|+..+|+++|||++.++++.+.....+.+.+..... +.
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~ 167 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETG--KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGS 167 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC--CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCC
Confidence 33444444444455555555322 22 5799999999999999999999999999999999988888776654432 10
Q ss_pred CCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCccc----cccCCC
Q 012594 160 LDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPA----CDLIPN 235 (460)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~----~~~~p~ 235 (460)
.. ......+.++|+++++..+++++... . ..+..+...+.+..+....++.+++||+++||++. .+..|+
T Consensus 168 ~~----~~~~~~~~~iPg~p~~~~~dlp~~~~-~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~ 241 (454)
T 3hbf_A 168 KE----VHDVKSIDVLPGFPELKASDLPEGVI-K-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKL 241 (454)
T ss_dssp HH----HTTSSCBCCSTTSCCBCGGGSCTTSS-S-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSC
T ss_pred Cc----cccccccccCCCCCCcChhhCchhhc-c-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCC
Confidence 00 01123455689999988888884333 2 22334555666666778899999999999999863 345689
Q ss_pred eeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCcc
Q 012594 236 ILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNK 315 (460)
Q Consensus 236 ~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~ 315 (460)
+++|||++...... .+..+.++.+||+.++++++|||+|||+...+.+++.+++.+++..+++|||+++..
T Consensus 242 v~~vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~---- 312 (454)
T 3hbf_A 242 LLNVGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD---- 312 (454)
T ss_dssp EEECCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----
T ss_pred EEEECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----
Confidence 99999998643321 123467899999998889999999999988889999999999999999999999865
Q ss_pred ccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhccee
Q 012594 316 SHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGL 395 (460)
Q Consensus 316 ~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~ 395 (460)
....+|++|.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.||+++++.+|+|+
T Consensus 313 ~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv 392 (454)
T 3hbf_A 313 PKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGV 392 (454)
T ss_dssp HHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEE
T ss_pred chhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeE
Confidence 23457888888889999999999999999999999999999999999999999999999999999999999998459999
Q ss_pred EeecCCCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012594 396 RFFPDENGIITRQEIQRQVKALLNDG---GIKANALKMKQMARKSLVEGGSSFRNFESFVSQLK 456 (460)
Q Consensus 396 ~~~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 456 (460)
.+.. +.+++++|+++|+++|+|+ +||+||+++++++++++++||+|.+++++|++.+.
T Consensus 393 ~l~~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 393 GVDN---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp ECGG---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred EecC---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9974 6789999999999999887 79999999999999999999999999999999875
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=8.1e-64 Score=494.30 Aligned_cols=451 Identities=32% Similarity=0.619 Sum_probs=336.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCcc-ccCCCCeEEEEcCCCCCCCC---cCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQK-AEQSSLITMVSIPDGLESHE---ADRR 78 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~---~~~~ 78 (460)
+++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+..... ....++++|+.++++++..+ ....
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~ 86 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQ 86 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------C
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcch
Confidence 3579999999999999999999999999999999999998877665431100 01114899999997665421 0223
Q ss_pred cHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhhc
Q 012594 79 DLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEAG 158 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (460)
++..++..+...+.+.++++++.+....+..++|+||+|.++.|+..+|+++|||++.++++.+.....+.+++.+...+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 166 (482)
T 2pq6_A 87 DVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERG 166 (482)
T ss_dssp CHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcC
Confidence 44555555556778889999998864200168999999999999999999999999999999987766655555544444
Q ss_pred CCCCCCCC--CC---CCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCccc----
Q 012594 159 LLDSNGNA--MT---DEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPA---- 229 (460)
Q Consensus 159 ~~~~~~~~--~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~---- 229 (460)
+.+..... .. .....++|+++.+...+++ .++........+...+....+....++.+++|++++||++.
T Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~ 245 (482)
T 2pq6_A 167 IIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 245 (482)
T ss_dssp CSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHH
T ss_pred CCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHH
Confidence 44321100 00 1122245666555555544 22222111223334444455566789999999999999863
Q ss_pred cccCCCeeeeCccCCC-CCcc------CccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCC
Q 012594 230 CDLIPNILTIGPLLGR-DHLE------HSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQ 302 (460)
Q Consensus 230 ~~~~p~~~~vGp~~~~-~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~ 302 (460)
.+..+++++|||++.. +... ......|+.+.++.+|++.++++++|||+|||....+.+.+.+++++++..++
T Consensus 246 ~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~ 325 (482)
T 2pq6_A 246 SSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKK 325 (482)
T ss_dssp HTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcCC
Confidence 3334899999999763 1110 00012345566789999998888899999999987788889999999999999
Q ss_pred CEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhh
Q 012594 303 PFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQ 382 (460)
Q Consensus 303 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~ 382 (460)
+++|+++.....+....+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|+..||+.
T Consensus 326 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~~ 405 (482)
T 2pq6_A 326 SFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPT 405 (482)
T ss_dssp EEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHH
T ss_pred cEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchHH
Confidence 99999875421111223788887778899999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHH-hhhcceeEeecCCCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhc
Q 012594 383 NRNYIF-DAWKIGLRFFPDENGIITRQEIQRQVKALLNDG---GIKANALKMKQMARKSLVEGGSSFRNFESFVSQLKAI 458 (460)
Q Consensus 383 ~a~~v~-~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 458 (460)
||++++ + +|+|+.+. ..++++.|+++|+++|+|+ +||+||+++++++++++.+||++.+++++|++++...
T Consensus 406 na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 406 DCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 999997 6 69999995 4589999999999999988 6999999999999999999999999999999998654
Q ss_pred C
Q 012594 459 G 459 (460)
Q Consensus 459 ~ 459 (460)
+
T Consensus 481 ~ 481 (482)
T 2pq6_A 481 Q 481 (482)
T ss_dssp -
T ss_pred C
Confidence 3
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=8e-61 Score=471.11 Aligned_cols=436 Identities=32% Similarity=0.519 Sum_probs=325.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeCcc--chhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccH
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEH-GIKVTFVSTEH--MHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDL 80 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~r-Gh~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 80 (460)
++||+++|+|++||++|+++||++|++| ||+|||++++. +...+++... ....+++|+.++....+......++
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 99999999987 3444443100 0024899999986532211022233
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhcCCCCCc-cEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhhcC
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNKSNDCEKI-SCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEAGL 159 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~-D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
...+......+.+.++++++.+.. . .++ |+||+|.+..|+..+|+++|||++.++++++.....+.++|.......
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~--~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-G--GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVS 159 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-T--TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-C--CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCC
Confidence 333334445566778888877642 1 578 999999998999999999999999999999887776666554432211
Q ss_pred CCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCccccc-------c
Q 012594 160 LDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPACD-------L 232 (460)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~-------~ 232 (460)
.+ +.+.. ....+|+++++...++...+. ... .. ....+......+..++.+++|++.++|++... .
T Consensus 160 ~~---~~~~~-~~~~~Pg~~p~~~~~l~~~~~-~~~-~~-~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~ 232 (480)
T 2vch_A 160 CE---FRELT-EPLMLPGCVPVAGKDFLDPAQ-DRK-DD-AYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLD 232 (480)
T ss_dssp SC---GGGCS-SCBCCTTCCCBCGGGSCGGGS-CTT-SH-HHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTT
T ss_pred Cc---ccccC-CcccCCCCCCCChHHCchhhh-cCC-ch-HHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccC
Confidence 11 00101 112457776666555553221 111 11 23333344455677889999999999974221 1
Q ss_pred CCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCC
Q 012594 233 IPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDF 312 (460)
Q Consensus 233 ~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~ 312 (460)
.+++++|||++...... ..++.+.++.+|++.++++++|||+|||+...+.+.+.+++++++.++++|||+++...
T Consensus 233 ~~~v~~vGpl~~~~~~~----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~ 308 (480)
T 2vch_A 233 KPPVYPVGPLVNIGKQE----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPS 308 (480)
T ss_dssp CCCEEECCCCCCCSCSC----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred CCcEEEEeccccccccc----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcc
Confidence 36899999998653210 01235678999999988889999999999888899999999999999999999997642
Q ss_pred Cc-----------cc-cCCCchhHHhhhCCCcEEee-ccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccch
Q 012594 313 MN-----------KS-HAKLPDGFVERVSDRGKLVE-WAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFAD 379 (460)
Q Consensus 313 ~~-----------~~-~~~~~~~~~~~~~~~v~~~~-~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~d 379 (460)
.. .. ...+|+++.++..++.+++. |+||.+||+|++|++||||||+||++||+++|||||++|++.|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~D 388 (480)
T 2vch_A 309 GIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAE 388 (480)
T ss_dssp SSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred ccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecccccc
Confidence 10 01 12477888777766667665 9999999999999999999999999999999999999999999
Q ss_pred hhhhHHHH-HhhhcceeEeecCCCCccCHHHHHHHHHHHhc---ChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012594 380 QYQNRNYI-FDAWKIGLRFFPDENGIITRQEIQRQVKALLN---DGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQL 455 (460)
Q Consensus 380 Q~~~a~~v-~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~---~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 455 (460)
|+.||+++ ++ +|+|+.+...+++.++++.|+++|+++|+ +++||+||+++++++++++.+||++.+++++|++.+
T Consensus 389 Q~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~ 467 (480)
T 2vch_A 389 QKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKW 467 (480)
T ss_dssp HHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred chHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999997 56 79999996522237899999999999998 678999999999999999999999999999999988
Q ss_pred Hh
Q 012594 456 KA 457 (460)
Q Consensus 456 ~~ 457 (460)
..
T Consensus 468 ~~ 469 (480)
T 2vch_A 468 KA 469 (480)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=4.1e-61 Score=470.13 Aligned_cols=437 Identities=27% Similarity=0.463 Sum_probs=326.0
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCE--EEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccH
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIK--VTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDL 80 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 80 (460)
+++||+++|+|++||++|+++||+.|++|||+ ||+++++.+...+.+.... ....+++|+.++++++.......+.
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYVFAGRP 83 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCcccccCCh
Confidence 35799999999999999999999999999754 5888887655544332110 0124899999988766542111123
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhh-cCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhh-c
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNK-SNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEA-G 158 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-~ 158 (460)
...+..+...+...++++++.+.. .. .+||+||+|.++.|+..+|+++|||+|.++++.+.....+.+.+..... +
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETG--RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIG 161 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHT--CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHC
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccC--CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccC
Confidence 333333444444455556654332 12 6899999999999999999999999999999988766555443332211 2
Q ss_pred CCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCccc----cccCC
Q 012594 159 LLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPA----CDLIP 234 (460)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~----~~~~p 234 (460)
..+. .......+.++|+++.+..++++.... .......+...+.+..+....++.+++|++++||++. ++..|
T Consensus 162 ~~~~--~~~~~~~~~~~pg~~~~~~~~lp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~ 238 (456)
T 2c1x_A 162 VSGI--QGREDELLNFIPGMSKVRFRDLQEGIV-FGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLK 238 (456)
T ss_dssp SSCC--TTCTTCBCTTSTTCTTCBGGGSCTTTS-SSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSS
T ss_pred Cccc--ccccccccccCCCCCcccHHhCchhhc-CCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCC
Confidence 2110 011122344678887766666663222 2222222333444444456788999999999999863 34457
Q ss_pred CeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCc
Q 012594 235 NILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMN 314 (460)
Q Consensus 235 ~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~ 314 (460)
++++|||+....... .++.+.++.+|++..+++++|||++||......+.+.+++++++..+.+++|+++..
T Consensus 239 ~~~~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~--- 310 (456)
T 2c1x_A 239 TYLNIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK--- 310 (456)
T ss_dssp CEEECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG---
T ss_pred CEEEecCcccCcccc-----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc---
Confidence 999999998643211 123456789999988888999999999987788899999999999999999999754
Q ss_pred cccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcce
Q 012594 315 KSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIG 394 (460)
Q Consensus 315 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g 394 (460)
....+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.+|+|
T Consensus 311 -~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g 389 (456)
T 2c1x_A 311 -ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIG 389 (456)
T ss_dssp -GGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCE
T ss_pred -chhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeE
Confidence 2235777887777899999999999999999999999999999999999999999999999999999999999833999
Q ss_pred eEeecCCCCccCHHHHHHHHHHHhcCh---HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhc
Q 012594 395 LRFFPDENGIITRQEIQRQVKALLNDG---GIKANALKMKQMARKSLVEGGSSFRNFESFVSQLKAI 458 (460)
Q Consensus 395 ~~~~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 458 (460)
+.+.. +.++++.|+++|+++|+|+ +||+||+++++.+++++.+||+|.+++++|++.+...
T Consensus 390 ~~l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~ 453 (456)
T 2c1x_A 390 VRIEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 453 (456)
T ss_dssp EECGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred EEecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhc
Confidence 99964 6789999999999999987 7999999999999999999999999999999998653
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.7e-58 Score=452.86 Aligned_cols=427 Identities=25% Similarity=0.453 Sum_probs=321.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCccch-----hHHhhccCccccCCCCeEEEEcCCCC-CCCCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEHMH-----AKITASMPQKAEQSSLITMVSIPDGL-ESHEA 75 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~ 75 (460)
++||+++|+|++||++|+++||+.|++| ||+|||++++.+. +.+.+.. ....+++|+.+|.+. +..+
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~----~~~~~i~~~~lp~~~~~~~~- 83 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL----ASQPQIQLIDLPEVEPPPQE- 83 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH----CSCTTEEEEECCCCCCCCGG-
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc----cCCCCceEEECCCCCCCccc-
Confidence 4699999999999999999999999999 9999999998753 3332210 112489999999753 3211
Q ss_pred CcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHh
Q 012594 76 DRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLV 155 (460)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 155 (460)
...+....+......+.+.++++++.+.. .++|+||+|.++.|+..+|+++|||++.++++++.....+.+++...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 84 LLKSPEFYILTFLESLIPHVKATIKTILS----NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp GGGSHHHHHHHHHHHTHHHHHHHHHHHCC----TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred ccCCccHHHHHHHHhhhHHHHHHHHhccC----CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 11111111333334566678888877622 78999999999899999999999999999999888766665554332
Q ss_pred hhcCCCCCCCCCCCCc---ccccCCC-CCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCccccc
Q 012594 156 EAGLLDSNGNAMTDEP---ILLSEGT-LPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPACD 231 (460)
Q Consensus 156 ~~~~~~~~~~~~~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~ 231 (460)
.. .+ +.. ... ...+|++ +++...++...+.. . .. ....+.........++.+++|++++||++...
T Consensus 160 ~~--~~---~~~-~~~~~~~~~~pg~~~~~~~~~l~~~~~~-~--~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~ 229 (463)
T 2acv_A 160 IE--EV---FDD-SDRDHQLLNIPGISNQVPSNVLPDACFN-K--DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQSSID 229 (463)
T ss_dssp TT--CC---CCC-SSGGGCEECCTTCSSCEEGGGSCHHHHC-T--TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHHHHH
T ss_pred cc--CC---CCC-ccccCceeECCCCCCCCChHHCchhhcC-C--ch-HHHHHHHHHHhcccCCEEEECCHHHHhHHHHH
Confidence 10 00 111 111 2356777 65555544421111 1 11 22333344455678889999999999976432
Q ss_pred c-------CCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCc-CCCHHHHHHHHHHHHhCCCC
Q 012594 232 L-------IPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVA-VLSQEQLEELALGLESLQQP 303 (460)
Q Consensus 232 ~-------~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~ 303 (460)
. .+++++|||+......... ...|..+.++.+|++.++++++|||+|||+. ..+.+.+.+++++++..+++
T Consensus 230 ~l~~~~~p~~~v~~vGpl~~~~~~~~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~ 308 (463)
T 2acv_A 230 ALYDHDEKIPPIYAVGPLLDLKGQPNP-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVR 308 (463)
T ss_dssp HHHHHCTTSCCEEECCCCCCSSCCCBT-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCE
T ss_pred HHHhccccCCcEEEeCCCccccccccc-ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCc
Confidence 1 5789999999865320000 0001234578999999888899999999998 77888899999999999999
Q ss_pred EEEEEcCCCCccccCCCchhHHhhh--CCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhh
Q 012594 304 FLWVVRPDFMNKSHAKLPDGFVERV--SDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQY 381 (460)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~ 381 (460)
|||+++.+ ...+++++.++. ++|+++++|+||.++|.|+++++||||||+||++||+++|||||++|++.||+
T Consensus 309 ~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 383 (463)
T 2acv_A 309 FLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQ 383 (463)
T ss_dssp EEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred EEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhH
Confidence 99999753 123667776666 78999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHH-HhhhcceeEe-ecCCCC--ccCHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012594 382 QNRNYI-FDAWKIGLRF-FPDENG--IITRQEIQRQVKALLN-DGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQLK 456 (460)
Q Consensus 382 ~~a~~v-~~~lg~g~~~-~~~~~~--~~~~~~l~~~i~~~l~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 456 (460)
.||+++ ++ +|+|+.+ ...+.+ .++++.|.++|+++|+ +++||+||+++++++++++.+||+|.+++++|++++.
T Consensus 384 ~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 384 LNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 999995 67 7999999 311124 6899999999999997 4789999999999999999999999999999999984
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.6e-46 Score=366.79 Aligned_cols=399 Identities=19% Similarity=0.214 Sum_probs=275.6
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcC----c
Q 012594 2 DREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEAD----R 77 (460)
Q Consensus 2 ~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~ 77 (460)
++++||+|+++++.||++|+++||++|+++||+|++++++.+.+.+++. |++|+.++.+++..... .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 4467999999999999999999999999999999999999998888877 88999988764432101 2
Q ss_pred ccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhh
Q 012594 78 RDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEA 157 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (460)
.+....+..+.........++.+.++. .+||+||+|.+..|+..+|+.+|||++.+++.+.........++.. ..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~ 155 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD----DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV-QD 155 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT----SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG-SC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc-cc
Confidence 233333333433334445566666665 8999999999888999999999999999987664211000000000 00
Q ss_pred cCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHh----------hcccccEEEEccccccCc
Q 012594 158 GLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQ----------NLKISNWILCNSFYELDP 227 (460)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~le~ 227 (460)
++ .+.... + .++....... ...........+...+..... ....++.+++++.+.|++
T Consensus 156 ~~------~~~~~~----~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~ 223 (424)
T 2iya_A 156 PT------ADRGEE----A-AAPAGTGDAE-EGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQI 223 (424)
T ss_dssp CC------C---------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTST
T ss_pred cc------cccccc----c-ccccccccch-hhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCC
Confidence 00 000000 0 0000000000 000000000001111111111 112568899999999998
Q ss_pred cccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEE
Q 012594 228 PACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWV 307 (460)
Q Consensus 228 ~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 307 (460)
+...+++++++|||+...... ..+|++..+++++|||++||......+.+..++++++..+.+++|.
T Consensus 224 ~~~~~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~ 290 (424)
T 2iya_A 224 KGDTVGDNYTFVGPTYGDRSH-------------QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLS 290 (424)
T ss_dssp TGGGCCTTEEECCCCCCCCGG-------------GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEE
T ss_pred CccCCCCCEEEeCCCCCCccc-------------CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 755677899999997643211 1246655556779999999998666788899999998888899888
Q ss_pred EcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHH
Q 012594 308 VRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYI 387 (460)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v 387 (460)
++..... +.+ +..++|+++.+|+||.++|.++++ ||||||+||++||+++|+|+|++|...||+.||+++
T Consensus 291 ~g~~~~~-------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l 360 (424)
T 2iya_A 291 VGRFVDP-------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERI 360 (424)
T ss_dssp CCTTSCG-------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred ECCcCCh-------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHH
Confidence 8754211 111 123678999999999999988776 999999999999999999999999999999999999
Q ss_pred HhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012594 388 FDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQLKA 457 (460)
Q Consensus 388 ~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 457 (460)
++ +|+|+.+.. +.++++.|.++|+++++|++|+++++++++++++ .++..+.++.+.+.+..
T Consensus 361 ~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~ 422 (424)
T 2iya_A 361 VE-LGLGRHIPR---DQVTAEKLREAVLAVASDPGVAERLAAVRQEIRE----AGGARAAADILEGILAE 422 (424)
T ss_dssp HH-TTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHHH
T ss_pred HH-CCCEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHHhc
Confidence 98 699999965 5689999999999999999999999999999986 45555555554444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.9e-44 Score=347.57 Aligned_cols=358 Identities=17% Similarity=0.188 Sum_probs=232.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCc--------
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEA-------- 75 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------- 75 (460)
.|||||+++|+.||++|+++||++|++|||+|+|++++.+.+.. +. ++.+..+..+......
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~-~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVA-EA---------GLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHH-TT---------TCEEEESSTTCCSHHHHSCCC---
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHH-hc---------CCeeEecCCchhHhhhcccccccc
Confidence 58999999999999999999999999999999999998877644 34 6777777543321100
Q ss_pred ------CcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHHH
Q 012594 76 ------DRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVL 149 (460)
Q Consensus 76 ------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 149 (460)
...........+.......+.++++.++. ++||+||+|.++.++..+|+.+|||++.+...+........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~ 167 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS----WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG 167 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh
Confidence 00111111222222333445566666666 89999999999999999999999999987654432111110
Q ss_pred hhhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhh-cccccEEEEccccccC--
Q 012594 150 HAPKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQN-LKISNWILCNSFYELD-- 226 (460)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~le-- 226 (460)
.... ..+.....+..-. ....+..+....+.+.
T Consensus 168 ~~~~--------------------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (400)
T 4amg_A 168 ALIR--------------------------------------------RAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL 203 (400)
T ss_dssp HHHH--------------------------------------------HHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT
T ss_pred hHHH--------------------------------------------HHHHHHHHHhCCCcccccchhhcccCchhhcc
Confidence 0000 0000000000000 0011111111111110
Q ss_pred ccccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCC--HHHHHHHHHHHHhCCCCE
Q 012594 227 PPACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLS--QEQLEELALGLESLQQPF 304 (460)
Q Consensus 227 ~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~a~~~~~~~~ 304 (460)
.+.....+.....++... .....+.+|++..+++++|||++||..... .+.+..++++++..+.++
T Consensus 204 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~ 271 (400)
T 4amg_A 204 LPEDRRSPGAWPMRYVPY------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEF 271 (400)
T ss_dssp SCGGGCCTTCEECCCCCC------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEE
T ss_pred CcccccCCcccCcccccc------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceE
Confidence 010111122222222211 122233468888888899999999985433 356788999999999999
Q ss_pred EEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhH
Q 012594 305 LWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNR 384 (460)
Q Consensus 305 i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a 384 (460)
+|..+... ..... ..++|+++.+|+||.++|.|+++ ||||||+||++||+++|||+|++|++.||+.||
T Consensus 272 v~~~~~~~----~~~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na 340 (400)
T 4amg_A 272 VLTLGGGD----LALLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNR 340 (400)
T ss_dssp EEECCTTC----CCCCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHH
T ss_pred EEEecCcc----ccccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHH
Confidence 99886541 11111 13678999999999999988666 999999999999999999999999999999999
Q ss_pred HHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012594 385 NYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQL 455 (460)
Q Consensus 385 ~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 455 (460)
+++++ +|+|+.++. .+.++ ++|+++|+|++||+||+++++++++. .+. .++.+.++.|
T Consensus 341 ~~v~~-~G~g~~l~~---~~~~~----~al~~lL~d~~~r~~a~~l~~~~~~~----~~~-~~~a~~le~l 398 (400)
T 4amg_A 341 DVLTG-LGIGFDAEA---GSLGA----EQCRRLLDDAGLREAALRVRQEMSEM----PPP-AETAAXLVAL 398 (400)
T ss_dssp HHHHH-HTSEEECCT---TTCSH----HHHHHHHHCHHHHHHHHHHHHHHHTS----CCH-HHHHHHHHHH
T ss_pred HHHHH-CCCEEEcCC---CCchH----HHHHHHHcCHHHHHHHHHHHHHHHcC----CCH-HHHHHHHHHh
Confidence 99999 699999975 45555 46778999999999999999999973 333 3445555554
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=7.3e-44 Score=346.76 Aligned_cols=379 Identities=12% Similarity=0.104 Sum_probs=255.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcC-cccHHHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEAD-RRDLHKV 83 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~ 83 (460)
|||+|+++|+.||++|+++||++|++|||+|+|++++.+.+.+.+. |++|+.++......... .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchHH
Confidence 4899999999999999999999999999999999999988877776 88999888653211000 1111111
Q ss_pred HHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCC-Ccch--HHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhhcCC
Q 012594 84 RQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADL-TVGW--ALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEAGLL 160 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
+..+ +.....++++.+.... .+||+||+|. +..| +..+|+.+|||+|.++..+..... ..
T Consensus 72 ~~~~---~~~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~- 134 (415)
T 1iir_A 72 VRRF---TTEAIATQFDEIPAAA--EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PY- 134 (415)
T ss_dssp HHHH---HHHHHHHHHHHHHHHT--TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SS-
T ss_pred HHHH---HHHHHHHHHHHHHHHh--cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cc-
Confidence 1111 1122333344433212 7899999997 5668 899999999999999877643100 00
Q ss_pred CCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHH----HHHhhc------------ccccEEEEccccc
Q 012594 161 DSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACS----AVAQNL------------KISNWILCNSFYE 224 (460)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------------~~~~~~l~~~~~~ 224 (460)
++...... .+++ .... +.+.....+......+. ...+.. ... .+++++++.
T Consensus 135 ----~p~~~~~~-~~~~--~~~~-----n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (415)
T 1iir_A 135 ----YPPPPLGE-PSTQ--DTID-----IPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPV 201 (415)
T ss_dssp ----SCCCC------------CH-----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTT
T ss_pred ----cCCccCCc-cccc--hHHH-----HHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChh
Confidence 00000000 0000 0000 00000000000001011 111010 122 689999999
Q ss_pred cCc-cccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCC
Q 012594 225 LDP-PACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQP 303 (460)
Q Consensus 225 le~-~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~ 303 (460)
|++ + .+.. ++++|||+..++. ++.+.++.+|++.. +++|||++||.. ...+.+..++++++..+.+
T Consensus 202 l~~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~ 268 (415)
T 1iir_A 202 LAPLQ-PTDL-DAVQTGAWILPDE--------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRR 268 (415)
T ss_dssp TSCCC-CCSS-CCEECCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCC
T ss_pred hcCCC-cccC-CeEeeCCCccCcc--------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCe
Confidence 987 4 3323 8999999987532 23566788999765 359999999986 5678888899999999999
Q ss_pred EEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhh
Q 012594 304 FLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQN 383 (460)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~ 383 (460)
++|+++.... . . . ..++|+++.+|+||.++| +.+++||||||+||++||+++|+|+|++|...||..|
T Consensus 269 ~v~~~g~~~~----~-~-~----~~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 336 (415)
T 1iir_A 269 VILSRGWADL----V-L-P----DDGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYY 336 (415)
T ss_dssp EEECTTCTTC----C-C-S----SCGGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred EEEEeCCCcc----c-c-c----CCCCCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECCCCCccHHH
Confidence 9998765411 1 1 1 124678999999999999 4566699999999999999999999999999999999
Q ss_pred HHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012594 384 RNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQLKA 457 (460)
Q Consensus 384 a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 457 (460)
|+++++ +|+|+.++. ..++.+.|.++|+++ +|++|+++++++++++++ ......+.++++++..
T Consensus 337 a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 337 AGRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARATAVAGTIRT-----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred HHHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHh
Confidence 999998 699999865 568999999999999 999999999999999864 3344455556665544
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.4e-41 Score=331.10 Aligned_cols=376 Identities=15% Similarity=0.164 Sum_probs=269.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCc----Cccc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEA----DRRD 79 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~ 79 (460)
++||+|++.++.||++|+++||++|+++||+|++++++.+.+.+++. |++|..++...+.... ...+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhcccc
Confidence 56999999999999999999999999999999999999999988877 8999999865543220 0011
Q ss_pred HHHHHHH-HHhhchHHHHHHHHHHhhcCCCCCccEEEeC-CCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhh
Q 012594 80 LHKVRQS-MLTVMPGCLRNLIEKVNKSNDCEKISCVIAD-LTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEA 157 (460)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (460)
....+.. +.......+.++.+.++. ++||+||+| ....++..+|+.+|||++.+.+.......... .+.....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~ 165 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG----DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMVTL 165 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS----SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-ccccccc
Confidence 1112222 333333445566666666 999999999 77778999999999999988754431000000 0000000
Q ss_pred cCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHh----------hcc-cccEEEEccccccC
Q 012594 158 GLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQ----------NLK-ISNWILCNSFYELD 226 (460)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~l~~~~~~le 226 (460)
..+..+. ....+...+..... ... ..+..+..+.+.++
T Consensus 166 ----------------~~~~~p~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~ 214 (415)
T 3rsc_A 166 ----------------AGTIDPL---------------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ 214 (415)
T ss_dssp ----------------HTCCCGG---------------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS
T ss_pred ----------------cccCChh---------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC
Confidence 0000000 00000011111000 111 23888899999998
Q ss_pred ccccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEE
Q 012594 227 PPACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLW 306 (460)
Q Consensus 227 ~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~ 306 (460)
++...++.++.++||........ .+|....+++++||+++||......+.+..++++++..+.+++|
T Consensus 215 ~~~~~~~~~~~~vGp~~~~~~~~-------------~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~ 281 (415)
T 3rsc_A 215 IAGDTFDDRFVFVGPCFDDRRFL-------------GEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVM 281 (415)
T ss_dssp TTGGGCCTTEEECCCCCCCCGGG-------------CCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred CCcccCCCceEEeCCCCCCcccC-------------cCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEE
Confidence 87555677899999987543211 13444445677999999998766778889999999988888888
Q ss_pred EEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHH
Q 012594 307 VVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNY 386 (460)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~ 386 (460)
.++.+... +.+ +..++|+++.+|+|+.++|.++++ ||||||.||+.||+++|+|+|++|...||..||++
T Consensus 282 ~~g~~~~~-------~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~ 351 (415)
T 3rsc_A 282 TLGGQVDP-------AAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARR 351 (415)
T ss_dssp ECTTTSCG-------GGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHH
T ss_pred EeCCCCCh-------HHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHH
Confidence 87754111 111 123678999999999999977665 99999999999999999999999999999999999
Q ss_pred HHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012594 387 IFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQL 455 (460)
Q Consensus 387 v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 455 (460)
+++ .|+|+.+.. ++++.+.|.++|.++|+|++++++++++++++.+ .++..+.++.+.+.+
T Consensus 352 l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 352 VDQ-LGLGAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAVEAYL 412 (415)
T ss_dssp HHH-HTCEEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHH
T ss_pred HHH-cCCEEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHh
Confidence 999 599999975 6789999999999999999999999999999987 556555555554444
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=5.7e-43 Score=340.69 Aligned_cols=374 Identities=13% Similarity=0.043 Sum_probs=258.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcC--cccHHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEAD--RRDLHK 82 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~ 82 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |++|+.++......... ......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 4899999999999999999999999999999999999888888777 88999888543211000 011111
Q ss_pred HHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCC-Ccch--HHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhhcC
Q 012594 83 VRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADL-TVGW--ALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEAGL 159 (460)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
.+..+ +.....++++.+.... .+||+||+|. +..+ +..+|+.+|||++.+++.+....
T Consensus 72 ~~~~~---~~~~~~~~~~~l~~~~--~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~-------------- 132 (416)
T 1rrv_A 72 EEQRL---AAMTVEMQFDAVPGAA--EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA-------------- 132 (416)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHT--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------------
T ss_pred HHHHH---HHHHHHHHHHHHHHHh--cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC--------------
Confidence 11111 1122344444444212 7899999996 3456 88999999999999877654310
Q ss_pred CCCCCCCCCCCcccccC-CCCCCccccCCCCCCCCCc----chhHHHHH----HHHHHh------------hcccccEEE
Q 012594 160 LDSNGNAMTDEPILLSE-GTLPWKKKEYGWCFPSQPH----MQKLFFGA----CSAVAQ------------NLKISNWIL 218 (460)
Q Consensus 160 ~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~~~~~~------------~~~~~~~~l 218 (460)
. ..+| .+. +. +......... ........ ...... ..... .++
T Consensus 133 -------~-----~~~p~~~~-~~---~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l 195 (416)
T 1rrv_A 133 -------S-----PHLPPAYD-EP---TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPL 195 (416)
T ss_dssp -------C-----SSSCCCBC-SC---CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCE
T ss_pred -------C-----cccCCCCC-CC---CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeE
Confidence 0 0011 000 00 0000000000 00000000 001110 01222 789
Q ss_pred EccccccCccccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcC-CCHHHHHHHHHHH
Q 012594 219 CNSFYELDPPACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAV-LSQEQLEELALGL 297 (460)
Q Consensus 219 ~~~~~~le~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~ 297 (460)
++++++|+++ .+.. ++++|||+..+.. ++.+.++.+|++.. +++|||++||... ...+.+..+++++
T Consensus 196 ~~~~~~l~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al 263 (416)
T 1rrv_A 196 LAADPVLAPL-QPDV-DAVQTGAWLLSDE--------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAI 263 (416)
T ss_dssp ECSCTTTSCC-CSSC-CCEECCCCCCCCC--------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHH
T ss_pred EccCccccCC-CCCC-CeeeECCCccCcc--------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHH
Confidence 9999999876 3222 8999999987532 23566788999765 3599999999753 3456788899999
Q ss_pred HhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeecccc
Q 012594 298 ESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYF 377 (460)
Q Consensus 298 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~ 377 (460)
+..+.+++|+++.... . . ...++|+++.+|+||.++|++ +++||||||+||++||+++|+|+|++|..
T Consensus 264 ~~~~~~~v~~~g~~~~----~-~-----~~~~~~v~~~~~~~~~~ll~~--~d~~v~~~G~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 264 RAQGRRVILSRGWTEL----V-L-----PDDRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp HHTTCCEEEECTTTTC----C-C-----SCCCTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred HHCCCeEEEEeCCccc----c-c-----cCCCCCEEEeccCChHHHhcc--CCEEEecCChhHHHHHHHcCCCEEEccCC
Confidence 9999999998875411 1 1 123678999999999999955 55599999999999999999999999999
Q ss_pred chhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012594 378 ADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQLKA 457 (460)
Q Consensus 378 ~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 457 (460)
.||..||+++++ +|+|+.+.. ..++++.|.++|+++ +|++|+++++++++++++ .++. +.++.+++.+..
T Consensus 332 ~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~----~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 332 TDQPYFAGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT----DGAA-AAADLVLAAVGR 401 (416)
T ss_dssp BTHHHHHHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC----CHHH-HHHHHHHHHHHC
T ss_pred CCcHHHHHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh----cCcH-HHHHHHHHHHhc
Confidence 999999999998 699999864 568999999999999 999999999999998875 3444 444444265543
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.2e-40 Score=323.32 Aligned_cols=377 Identities=16% Similarity=0.196 Sum_probs=268.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCC----cCccc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHE----ADRRD 79 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~ 79 (460)
++||+|++.++.||++|+++||++|+++||+|++++++.+.+.+++. |++|..++...+... ....+
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQED 74 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCCTT
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccccc
Confidence 45999999999999999999999999999999999999888888776 899999875433211 02223
Q ss_pred HHHHHHH-HHhhchHHHHHHHHHHhhcCCCCCccEEEeC-CCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhh
Q 012594 80 LHKVRQS-MLTVMPGCLRNLIEKVNKSNDCEKISCVIAD-LTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEA 157 (460)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (460)
....+.. +.......+.++.+.+++ ++||+||+| ....++..+|+.+|||+|.+.+.......... .+.....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~ 149 (402)
T 3ia7_A 75 AETQLHLVYVRENVAILRAAEEALGD----NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKS 149 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT----CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc----cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccccc
Confidence 3333443 444444455666677766 999999999 77778999999999999988654432100000 0000000
Q ss_pred cCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHh----------hccc-ccEEEEccccccC
Q 012594 158 GLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQ----------NLKI-SNWILCNSFYELD 226 (460)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~l~~~~~~le 226 (460)
. ....+ . ....+...+..... .... .+..+..+.++++
T Consensus 150 ~-----------------~~~~~--------~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~ 198 (402)
T 3ia7_A 150 N-----------------GQRHP--------A------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQ 198 (402)
T ss_dssp H-----------------TCCCG--------G------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGS
T ss_pred c-----------------cccCh--------h------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhC
Confidence 0 00000 0 00000001111000 0112 2778888888888
Q ss_pred ccccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEE
Q 012594 227 PPACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLW 306 (460)
Q Consensus 227 ~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~ 306 (460)
++...+..++.++||........ .+|....+++++||+++||......+.+..++++++..+.++++
T Consensus 199 ~~~~~~~~~~~~vGp~~~~~~~~-------------~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (402)
T 3ia7_A 199 PFAETFDERFAFVGPTLTGRDGQ-------------PGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVM 265 (402)
T ss_dssp TTGGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEE
T ss_pred CccccCCCCeEEeCCCCCCcccC-------------CCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEE
Confidence 77455677899999987543211 13444445677999999999777777899999999988888888
Q ss_pred EEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccc-cchhhhhHH
Q 012594 307 VVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPY-FADQYQNRN 385 (460)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~-~~dQ~~~a~ 385 (460)
.++.+... +.+ +..++|+++.+|+|+.++|.++++ +|||||.||+.||+++|+|+|++|. ..||..||+
T Consensus 266 ~~g~~~~~-------~~~-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~ 335 (402)
T 3ia7_A 266 AIGGFLDP-------AVL-GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAE 335 (402)
T ss_dssp ECCTTSCG-------GGG-CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHH
T ss_pred EeCCcCCh-------hhh-CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHH
Confidence 87754111 111 123678999999999999988666 9999999999999999999999999 999999999
Q ss_pred HHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012594 386 YIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQLK 456 (460)
Q Consensus 386 ~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 456 (460)
++++ .|+|..+.. ++++++.|.++|.++|+|++++++++++++++.+ .++..+.++.+.+.+.
T Consensus 336 ~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 336 RVIE-LGLGSVLRP---DQLEPASIREAVERLAADSAVRERVRRMQRDILS----SGGPARAADEVEAYLG 398 (402)
T ss_dssp HHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHH
T ss_pred HHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh----CChHHHHHHHHHHHHh
Confidence 9999 599999975 6789999999999999999999999999999986 5555555555544443
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.8e-41 Score=326.93 Aligned_cols=351 Identities=16% Similarity=0.151 Sum_probs=248.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCc-CcccHHHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEA-DRRDLHKV 83 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~ 83 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |++|..++........ ........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 4799999999999999999999999999999999999999988877 8999998754331100 00000011
Q ss_pred HHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchH---HHHHHHhCCceEEEcccchHHHHHHHhhhhHhhhcCC
Q 012594 84 RQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWA---LEVAEQMGIARAAVIPYAPASLALVLHAPKLVEAGLL 160 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (460)
...+.......++++.+.+ .+||+||+|.....+ ..+|+.+|||++.+...+......
T Consensus 72 ~~~~~~~~~~~~~~l~~~~------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~------------- 132 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE------------- 132 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG-------------
T ss_pred HHHHHHHHHHHHHHHHHHh------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh-------------
Confidence 1112222223333333332 469999998665544 789999999999888766421000
Q ss_pred CCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhh-----------cccccEEEEccccccCccc
Q 012594 161 DSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQN-----------LKISNWILCNSFYELDPPA 229 (460)
Q Consensus 161 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~le~~~ 229 (460)
.+. ..+.. ........+.......... ....+..+.+..+.+.+.
T Consensus 133 ----------------~~~------~~~~~-~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~- 188 (404)
T 3h4t_A 133 ----------------QSQ------AERDM-YNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL- 188 (404)
T ss_dssp ----------------SCH------HHHHH-HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-
T ss_pred ----------------hHH------HHHHH-HHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-
Confidence 000 00000 0000000000000000000 011344566888888665
Q ss_pred cccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEc
Q 012594 230 CDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVR 309 (460)
Q Consensus 230 ~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 309 (460)
.++.++++++|++..+.. .+.+.++.+|++.. +++|||++||... ..+.+..+++++++.+.+++|..+
T Consensus 189 ~~~~~~~~~~G~~~~~~~--------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g 257 (404)
T 3h4t_A 189 RPTDLGTVQTGAWILPDQ--------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSG 257 (404)
T ss_dssp CTTCCSCCBCCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECT
T ss_pred CCCCCCeEEeCccccCCC--------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeC
Confidence 567779999998876532 14567788888753 5699999999876 678889999999999999999887
Q ss_pred CCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHh
Q 012594 310 PDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFD 389 (460)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~ 389 (460)
... .... ..++|+++.+|+|+.++|.+ +++||||||+||+.||+++|+|+|++|+..||+.||+++++
T Consensus 258 ~~~----~~~~------~~~~~v~~~~~~~~~~ll~~--~d~~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~ 325 (404)
T 3h4t_A 258 WAG----LGRI------DEGDDCLVVGEVNHQVLFGR--VAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD 325 (404)
T ss_dssp TTT----CCCS------SCCTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH
T ss_pred Ccc----cccc------cCCCCEEEecCCCHHHHHhh--CcEEEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH
Confidence 541 1111 12678999999999999966 55599999999999999999999999999999999999999
Q ss_pred hhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 012594 390 AWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMAR 435 (460)
Q Consensus 390 ~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~ 435 (460)
.|+|..+.. ..++.+.|.++|+++++ ++|+++++++++.++
T Consensus 326 -~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 326 -LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAVAGTIR 366 (404)
T ss_dssp -HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCC
T ss_pred -CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHh
Confidence 699999975 67899999999999998 999999999999886
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.9e-40 Score=325.20 Aligned_cols=374 Identities=15% Similarity=0.150 Sum_probs=247.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCc--------
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEA-------- 75 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------- 75 (460)
++||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |++|+.++...+....
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~~ 90 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHDI 90 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhccc
Confidence 46999999999999999999999999999999999999988888776 8999998865310000
Q ss_pred -------C-----cc--cHH---HHHHHHHhh----c-hH-HHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCC
Q 012594 76 -------D-----RR--DLH---KVRQSMLTV----M-PG-CLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGI 132 (460)
Q Consensus 76 -------~-----~~--~~~---~~~~~~~~~----~-~~-~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgi 132 (460)
. .. .+. .....+... + .. .+.++++.+++ ++||+||+|..+.++..+|+.+||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 91 IDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK----WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH----HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred ccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh----cCCCEEEecCcchhHHHHHHHcCC
Confidence 0 10 110 111112111 1 13 56777777776 899999999977899999999999
Q ss_pred ceEEEcccchHHHHHHHhhhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHh---
Q 012594 133 ARAAVIPYAPASLALVLHAPKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQ--- 209 (460)
Q Consensus 133 P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 209 (460)
|+|.+...+.............. . ..+.. . . .....+.+........-
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~~--~---------------~~~~~----------~-~-~~~~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGLL--P---------------DQPEE----------H-R-EDPLAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHHG--G---------------GSCTT----------T-C-CCHHHHHHHHHHHHTTCCCC
T ss_pred CEEEEecCCCcchhhhhhhhhhc--c---------------ccccc----------c-c-cchHHHHHHHHHHHcCCCCC
Confidence 99998655432211110000000 0 00000 0 0 00011111111111000
Q ss_pred --hcccccEEEEccccccCccccccCC-CeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCC-
Q 012594 210 --NLKISNWILCNSFYELDPPACDLIP-NILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVL- 285 (460)
Q Consensus 210 --~~~~~~~~l~~~~~~le~~~~~~~p-~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~- 285 (460)
.+...+..+..+.+.++++ ..++. .+.+++ . ..+.++.+|++..+++++|||++||....
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~---~------------~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 281 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVD---Y------------NGPSVVPEWLHDEPERRRVCLTLGISSREN 281 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCC---C------------CSSCCCCGGGSSCCSSCEEEEEC-------
T ss_pred CccccCCCeEEEecCccccCC-CCCCCCceeeeC---C------------CCCcccchHhhcCCCCCEEEEECCCCcccc
Confidence 0112455666666666643 22211 122221 1 11223457888666678999999998653
Q ss_pred --CHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhH
Q 012594 286 --SQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLE 363 (460)
Q Consensus 286 --~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~e 363 (460)
..+.+..++++++..+.+++|..+.. ....+. ..++|+++.+|+|+.++|.+ +++||||||.||++|
T Consensus 282 ~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~--ad~~V~~~G~~t~~E 350 (441)
T 2yjn_A 282 SIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA-----NIPDNVRTVGFVPMHALLPT--CAATVHHGGPGSWHT 350 (441)
T ss_dssp ---CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS-----SCCSSEEECCSCCHHHHGGG--CSEEEECCCHHHHHH
T ss_pred cChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc-----cCCCCEEEecCCCHHHHHhh--CCEEEECCCHHHHHH
Confidence 33567778899988899999987743 111121 13678999999999999955 555999999999999
Q ss_pred hhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCC
Q 012594 364 GLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGS 443 (460)
Q Consensus 364 al~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~ 443 (460)
|+++|+|+|++|...||..||+++++ .|+|+.+.. ..++.+.|.++|+++|+|++|+++++++++++++ .++
T Consensus 351 a~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~ 422 (441)
T 2yjn_A 351 AAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA----EPS 422 (441)
T ss_dssp HHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCC
T ss_pred HHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc----CCC
Confidence 99999999999999999999999999 699999865 6689999999999999999999999999999986 444
Q ss_pred hHHHHHHHHHHH
Q 012594 444 SFRNFESFVSQL 455 (460)
Q Consensus 444 ~~~~~~~~~~~l 455 (460)
..+.+ +.++++
T Consensus 423 ~~~~~-~~i~~~ 433 (441)
T 2yjn_A 423 PAEVV-GICEEL 433 (441)
T ss_dssp HHHHH-HHHHHH
T ss_pred HHHHH-HHHHHH
Confidence 44444 444444
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.5e-39 Score=311.85 Aligned_cols=354 Identities=14% Similarity=0.114 Sum_probs=251.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCC-----------
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESH----------- 73 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------- 73 (460)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+... +++++.++......
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 4899999999999999999999999999999999998877777666 78888887533000
Q ss_pred CcCcc-cHHHHH-HH-HHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHHHh
Q 012594 74 EADRR-DLHKVR-QS-MLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVLH 150 (460)
Q Consensus 74 ~~~~~-~~~~~~-~~-~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 150 (460)
..... .....+ .. +.......+.++.+.+++ .+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA----WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc----cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-------
Confidence 00010 111111 21 122223345566666666 89999999987778899999999999986532110
Q ss_pred hhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhh-----cccccEEEEcccccc
Q 012594 151 APKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQN-----LKISNWILCNSFYEL 225 (460)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l 225 (460)
+ . . ....+.......... ...++.+++++.+.+
T Consensus 141 -------------------------~--~---------~------~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 178 (384)
T 2p6p_A 141 -------------------------A--D---------G------IHPGADAELRPELSELGLERLPAPDLFIDICPPSL 178 (384)
T ss_dssp -------------------------C--T---------T------THHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGG
T ss_pred -------------------------c--c---------h------hhHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHH
Confidence 0 0 0 000011111111111 112678999999998
Q ss_pred CccccccC-CCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCC-----CHHHHHHHHHHHHh
Q 012594 226 DPPACDLI-PNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVL-----SQEQLEELALGLES 299 (460)
Q Consensus 226 e~~~~~~~-p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~a~~~ 299 (460)
+++ .+++ +++.+++. . .+.++.+|++..+++++||+++||.... +.+.+..+++++++
T Consensus 179 ~~~-~~~~~~~~~~~~~-~--------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~ 242 (384)
T 2p6p_A 179 RPA-NAAPARMMRHVAT-S--------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR 242 (384)
T ss_dssp SCT-TSCCCEECCCCCC-C--------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT
T ss_pred CCC-CCCCCCceEecCC-C--------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhc
Confidence 865 3332 23444421 1 1123457887655567999999998654 45778889999998
Q ss_pred CCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccch
Q 012594 300 LQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFAD 379 (460)
Q Consensus 300 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~d 379 (460)
.+.+++|+.+.. . .+.+. ..++|+.+ +|+|+.++|++ +++||||||+||++||+++|+|+|++|...|
T Consensus 243 ~~~~~~~~~g~~----~----~~~l~-~~~~~v~~-~~~~~~~~l~~--~d~~v~~~G~~t~~Ea~~~G~P~v~~p~~~d 310 (384)
T 2p6p_A 243 WDVELIVAAPDT----V----AEALR-AEVPQARV-GWTPLDVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIPKGSV 310 (384)
T ss_dssp TTCEEEEECCHH----H----HHHHH-HHCTTSEE-ECCCHHHHGGG--CSEEEECSCTTHHHHHHHTTCCEEECCCSHH
T ss_pred CCcEEEEEeCCC----C----HHhhC-CCCCceEE-cCCCHHHHHhh--CCEEEeCCcHHHHHHHHHhCCCEEEccCccc
Confidence 899999987632 0 11121 24789999 99999999966 4559999999999999999999999999999
Q ss_pred hhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012594 380 QYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQLK 456 (460)
Q Consensus 380 Q~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 456 (460)
|..||+++++ .|+|+.+.. +.++.+.|.++|+++|+|++|+++++++++++++ .++..+.++.+.+-++
T Consensus 311 q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 311 LEAPARRVAD-YGAAIALLP---GEDSTEAIADSCQELQAKDTYARRAQDLSREISG----MPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----CCCHHHHHHHHHHHhh
Confidence 9999999998 699999864 5679999999999999999999999999999997 4555555554444443
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.2e-39 Score=315.95 Aligned_cols=365 Identities=17% Similarity=0.199 Sum_probs=252.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcC----ccc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEAD----RRD 79 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~ 79 (460)
++||+|++.++.||++|+++|+++|+++||+|++++++...+.+.+. +++++.++...+..... ..+
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 77 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHSTLPGPDADPEAWGST 77 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCCSCCTTSCGGGGCSS
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCcCccccccccccchh
Confidence 46999999999999999999999999999999999999887777665 88999888654322100 123
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhhcC
Q 012594 80 LHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEAGL 159 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 159 (460)
+...+..+...+...+..+.+.+++ .+||+||+|.+..++..+|+.+|||+|.+++.......+...+......
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~----~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~-- 151 (430)
T 2iyf_A 78 LLDNVEPFLNDAIQALPQLADAYAD----DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR-- 151 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT----SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh--
Confidence 3333333333333445566666666 8999999998777899999999999999886543100000000000000
Q ss_pred CCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHH------HHhhcccccEEEEccccccCccccccC
Q 012594 160 LDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSA------VAQNLKISNWILCNSFYELDPPACDLI 233 (460)
Q Consensus 160 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~le~~~~~~~ 233 (460)
...+++.. .+ ....+...... ..+....++.+++++.+.++++...+.
T Consensus 152 --------------~~~~~~~~-------~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 205 (430)
T 2iyf_A 152 --------------EPRQTERG-------RA-----YYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVD 205 (430)
T ss_dssp --------------HHHHSHHH-------HH-----HHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGSC
T ss_pred --------------hhccchHH-------HH-----HHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccCC
Confidence 00000000 00 00000000000 000112468899999999987644556
Q ss_pred CC-eeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhC-CCCEEEEEcCC
Q 012594 234 PN-ILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESL-QQPFLWVVRPD 311 (460)
Q Consensus 234 p~-~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~ 311 (460)
++ ++++||....... ..+|.+..+++++||+++||......+.+..++++++.. +.+++|.++.+
T Consensus 206 ~~~v~~vG~~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~ 272 (430)
T 2iyf_A 206 EDVYTFVGACQGDRAE-------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRK 272 (430)
T ss_dssp TTTEEECCCCC------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC--
T ss_pred CccEEEeCCcCCCCCC-------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 67 9999986532110 013444345577999999998755678888899999875 77888887654
Q ss_pred CCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhh
Q 012594 312 FMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAW 391 (460)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~l 391 (460)
... +.+ +..++|+.+.+|+|+.++|.++++ ||+|||+||++||+++|+|+|++|...||..|++++++ .
T Consensus 273 ~~~-------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~ 341 (430)
T 2iyf_A 273 VTP-------AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-L 341 (430)
T ss_dssp -CG-------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-T
T ss_pred CCh-------HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-c
Confidence 111 111 123578999999999999988776 99999999999999999999999999999999999998 5
Q ss_pred cceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012594 392 KIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARK 436 (460)
Q Consensus 392 g~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 436 (460)
|+|+.+.. +.++.+.|+++|.++++|+++++++.++++++++
T Consensus 342 g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 342 GVARKLAT---EEATADLLRETALALVDDPEVARRLRRIQAEMAQ 383 (430)
T ss_dssp TSEEECCC---C-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCEEEcCC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 99999864 5678999999999999999999999999999886
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=8.9e-38 Score=302.47 Aligned_cols=342 Identities=14% Similarity=0.138 Sum_probs=227.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCC---------C
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESH---------E 74 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~ 74 (460)
+|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.+. |+.+..++...... .
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccCc
Confidence 57999999999999999999999999999999999998888888777 78888776321100 0
Q ss_pred ---c--Cccc-HHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHHHHHH
Q 012594 75 ---A--DRRD-LHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPASLALV 148 (460)
Q Consensus 75 ---~--~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 148 (460)
. .... .......+.......+.++.+.+++ ++||+|++|...+++..+|+.+|||++.+...........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER----WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 0 0001 1111222222233445566666666 8999999998778899999999999998765532211100
Q ss_pred HhhhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHh-----hcccccEEEEcccc
Q 012594 149 LHAPKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQ-----NLKISNWILCNSFY 223 (460)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~ 223 (460)
... ...+..... .....+..+..+.+
T Consensus 162 ~~~-------------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 192 (398)
T 4fzr_A 162 SAG-------------------------------------------------VGELAPELAELGLTDFPDPLLSIDVCPP 192 (398)
T ss_dssp HHH-------------------------------------------------HHHTHHHHHTTTCSSCCCCSEEEECSCG
T ss_pred HHH-------------------------------------------------HHHHHHHHHHcCCCCCCCCCeEEEeCCh
Confidence 000 000000000 01223555666666
Q ss_pred ccCccccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCC--------CHHHHHHHHH
Q 012594 224 ELDPPACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVL--------SQEQLEELAL 295 (460)
Q Consensus 224 ~le~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~ 295 (460)
.++.+.......+.++++.. ...++.+|+...+++++||+++||.... ..+.+..+++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 4fzr_A 193 SMEAQPKPGTTKMRYVPYNG--------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQ 258 (398)
T ss_dssp GGC----CCCEECCCCCCCC--------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHH
T ss_pred hhCCCCCCCCCCeeeeCCCC--------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHH
Confidence 55543111101122222110 1223346776656678999999998543 2356888999
Q ss_pred HHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeecc
Q 012594 296 GLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWP 375 (460)
Q Consensus 296 a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P 375 (460)
++++.+.+++|+.++.. .+.+ +..++|+++.+|+|+.++|.++++ ||||||.||+.||+++|+|+|++|
T Consensus 259 al~~~~~~~v~~~~~~~--------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p 327 (398)
T 4fzr_A 259 ELPKLGFEVVVAVSDKL--------AQTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVP 327 (398)
T ss_dssp HGGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred HHHhCCCEEEEEeCCcc--------hhhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecC
Confidence 99888889888876441 1111 124688999999999999988665 999999999999999999999999
Q ss_pred ccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012594 376 YFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARK 436 (460)
Q Consensus 376 ~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 436 (460)
...||..|++++++ .|+|+.+.. +.++++.|.++|.++|+|++++++++++++++++
T Consensus 328 ~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 328 VIAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp CSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHCTHHHHHHHHHHHHHTT
T ss_pred CchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc
Confidence 99999999999999 599999975 6678999999999999999999999999999986
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=5.8e-37 Score=296.71 Aligned_cols=350 Identities=13% Similarity=0.117 Sum_probs=237.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCC------------
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLE------------ 71 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------------ 71 (460)
+|||+|++.++.||++|+++|+++|.++||+|+++++ .+.+.++.. |+.++.++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccCC
Confidence 4799999999999999999999999999999999999 888888776 899999885421
Q ss_pred ----------CCCcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccc
Q 012594 72 ----------SHEADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 72 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~ 141 (460)
... ........+.... ...+.++.+.+++ ++||+||+|...+++..+|+.+|||++......
T Consensus 90 ~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~l~~~l~~----~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~ 161 (398)
T 3oti_A 90 PRFAETVATRPAI-DLEEWGVQIAAVN---RPLVDGTMALVDD----YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSA 161 (398)
T ss_dssp HHHHHTGGGSCCC-SGGGGHHHHHHHH---GGGHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTT
T ss_pred ccccccccCChhh-hHHHHHHHHHHHH---HHHHHHHHHHHHH----cCCCEEEECchhhHHHHHHHHcCCCEEEEeccC
Confidence 011 1112222222222 2233444444555 899999999888889999999999999765332
Q ss_pred hHHHHHHHhhhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEcc
Q 012594 142 PASLALVLHAPKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNS 221 (460)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 221 (460)
....... . .....+........-.....+..+..+
T Consensus 162 ~~~~~~~------------------------------------~---------~~~~~l~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T 3oti_A 162 WRTRGMH------------------------------------R---------SIASFLTDLMDKHQVSLPEPVATIESF 196 (398)
T ss_dssp CCCTTHH------------------------------------H---------HHHTTCHHHHHHTTCCCCCCSEEECSS
T ss_pred CCccchh------------------------------------h---------HHHHHHHHHHHHcCCCCCCCCeEEEeC
Confidence 1100000 0 000000000000000012234555555
Q ss_pred ccccCccccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCC--CHHHHHHHHHHHHh
Q 012594 222 FYELDPPACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVL--SQEQLEELALGLES 299 (460)
Q Consensus 222 ~~~le~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~a~~~ 299 (460)
.+.+..+.......+.++ |. .....+.+|+...+++++||+++||.... ..+.+..+++++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 3oti_A 197 PPSLLLEAEPEGWFMRWV-PY--------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE 261 (398)
T ss_dssp CGGGGTTSCCCSBCCCCC-CC--------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT
T ss_pred CHHHCCCCCCCCCCcccc-CC--------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc
Confidence 555543310110111121 11 01122235666556678999999998432 55678889999998
Q ss_pred CCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccch
Q 012594 300 LQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFAD 379 (460)
Q Consensus 300 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~d 379 (460)
.+.+++|+.++.. .+.+. ..++|+++.+|+|+.++|.++++ ||||||.||+.||+++|+|+|++|...|
T Consensus 262 ~~~~~v~~~g~~~--------~~~l~-~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~d 330 (398)
T 3oti_A 262 VDADFVLALGDLD--------ISPLG-TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRD 330 (398)
T ss_dssp SSSEEEEECTTSC--------CGGGC-SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTC
T ss_pred CCCEEEEEECCcC--------hhhhc-cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCch
Confidence 8889998877541 11111 23678999999999999988665 9999999999999999999999999999
Q ss_pred hhhhH--HHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012594 380 QYQNR--NYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQL 455 (460)
Q Consensus 380 Q~~~a--~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 455 (460)
|..|| +++++ .|+|+.++. .+.+++.|+ ++|+|++|+++++++++++++ ..+ ...+.+.++.+
T Consensus 331 q~~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~l~~l 395 (398)
T 3oti_A 331 QFQHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIGDESLRTAAREVREEMVA----LPT-PAETVRRIVER 395 (398)
T ss_dssp CSSCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHHCHHHHHHHHHHHHHHHT----SCC-HHHHHHHHHHH
T ss_pred hHHHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHcCHHHHHHHHHHHHHHHh----CCC-HHHHHHHHHHH
Confidence 99999 99999 699999975 566777776 888999999999999999986 344 34555555554
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=1.6e-35 Score=286.04 Aligned_cols=357 Identities=13% Similarity=0.170 Sum_probs=239.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEc-CCCCCCCC--------
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSI-PDGLESHE-------- 74 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~-------- 74 (460)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... |+.++.+ ........
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 47999999999999999999999999999999999998888878777 7888887 32111000
Q ss_pred -------cCcccHHHHHHHHHh----hchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchH
Q 012594 75 -------ADRRDLHKVRQSMLT----VMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPA 143 (460)
Q Consensus 75 -------~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 143 (460)
.........+..... .+..++.++.+.+++ ++||+||+|...+++..+|+.+|||++.+......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA----WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh----cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 000111111111111 111225555666666 89999999987778889999999999986543321
Q ss_pred HHHHHHhhhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhc-----ccccEEE
Q 012594 144 SLALVLHAPKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNL-----KISNWIL 218 (460)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l 218 (460)
... .........+......+ ...+..+
T Consensus 148 ~~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (391)
T 3tsa_A 148 TAG------------------------------------------------PFSDRAHELLDPVCRHHGLTGLPTPELIL 179 (391)
T ss_dssp TTT------------------------------------------------HHHHHHHHHHHHHHHHTTSSSSCCCSEEE
T ss_pred ccc------------------------------------------------cccchHHHHHHHHHHHcCCCCCCCCceEE
Confidence 000 00000111111111111 2236667
Q ss_pred EccccccCccccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcC--CC-HHHHHHHHH
Q 012594 219 CNSFYELDPPACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAV--LS-QEQLEELAL 295 (460)
Q Consensus 219 ~~~~~~le~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~ 295 (460)
..+.++++.........+.++ |.. ....+..|+...+++++||+++||... .. .+.+..+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~-p~~--------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~ 244 (391)
T 3tsa_A 180 DPCPPSLQASDAPQGAPVQYV-PYN--------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAA 244 (391)
T ss_dssp ECSCGGGSCTTSCCCEECCCC-CCC--------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHH
T ss_pred EecChhhcCCCCCccCCeeee-cCC--------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHH
Confidence 777777665421111122333 111 112223576665667899999999732 23 677888888
Q ss_pred HHHhC-CCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceeec
Q 012594 296 GLESL-QQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCW 374 (460)
Q Consensus 296 a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~ 374 (460)
+ ++. +.+++|..++. ....+. ..++|+++.+|+|+.++|.+++ +||||||.||+.||+++|+|+|++
T Consensus 245 ~-~~~p~~~~v~~~~~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~~ 312 (391)
T 3tsa_A 245 A-TELPGVEAVIAVPPE----HRALLT-----DLPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFTATRLGIPQLVL 312 (391)
T ss_dssp H-HTSTTEEEEEECCGG----GGGGCT-----TCCTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHHHTTCCEEEC
T ss_pred h-ccCCCeEEEEEECCc----chhhcc-----cCCCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHHHhCCCEEec
Confidence 8 877 67888876643 111111 2367899999999999995554 599999999999999999999999
Q ss_pred cccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012594 375 PYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQ 454 (460)
Q Consensus 375 P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 454 (460)
|...||..|+.++++ .|+|..+..+ ....+.+.|.++|.++|+|++++++++++++++.+ .++..+.+ +.++.
T Consensus 313 p~~~~q~~~a~~~~~-~g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~i~~ 385 (391)
T 3tsa_A 313 PQYFDQFDYARNLAA-AGAGICLPDE-QAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA----MPHPAALV-RTLEN 385 (391)
T ss_dssp CCSTTHHHHHHHHHH-TTSEEECCSH-HHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT----SCCHHHHH-HHHHH
T ss_pred CCcccHHHHHHHHHH-cCCEEecCcc-cccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc----CCCHHHHH-HHHHH
Confidence 999999999999999 5999998420 02378999999999999999999999999999986 45554444 44444
Q ss_pred H
Q 012594 455 L 455 (460)
Q Consensus 455 l 455 (460)
+
T Consensus 386 ~ 386 (391)
T 3tsa_A 386 T 386 (391)
T ss_dssp C
T ss_pred H
Confidence 3
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=3.1e-33 Score=271.96 Aligned_cols=358 Identities=20% Similarity=0.216 Sum_probs=245.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCC------------
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGL------------ 70 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------------ 70 (460)
++|||+|++.++.||+.|++.|+++|+++||+|++++++...+.+.+. |++++.++...
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhh
Confidence 357999999999999999999999999999999999998877777666 89998887410
Q ss_pred -----CCCCcCcccHHHHHHHHHhh-chHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchHH
Q 012594 71 -----ESHEADRRDLHKVRQSMLTV-MPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPAS 144 (460)
Q Consensus 71 -----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 144 (460)
+... ...........+... ....+..+.+.+++ .+||+||+|....++..+|+.+|||+|.........
T Consensus 90 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 90 DTDSPEGLT-PEQLSELPQIVFGRVIPQRVFDELQPVIER----LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp SCSCCTTCC-HHHHTTSHHHHHHTHHHHHHHHHHHHHHHH----HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred cccCCccCC-hhHhhHHHHHHHhccchHHHHHHHHHHHHh----cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 0000 000000111111111 12223445555555 899999999877788889999999999865443210
Q ss_pred HHHHHhhhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHh----------hcccc
Q 012594 145 LALVLHAPKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQ----------NLKIS 214 (460)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 214 (460)
.... ..+...+..... ....+
T Consensus 165 ~~~~-------------------------------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~ 195 (412)
T 3otg_A 165 DDLT-------------------------------------------------RSIEEEVRGLAQRLGLDLPPGRIDGFG 195 (412)
T ss_dssp SHHH-------------------------------------------------HHHHHHHHHHHHHTTCCCCSSCCGGGG
T ss_pred hhhh-------------------------------------------------HHHHHHHHHHHHHcCCCCCcccccCCC
Confidence 0000 000000110000 01355
Q ss_pred cEEEEccccccCccccccCCCeeeeCccCCCCCccCccCCCCCCCCchhhh-hccCCCCcEEEEEcCCCcCCCHHHHHHH
Q 012594 215 NWILCNSFYELDPPACDLIPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGW-LDKQAVGSVIYVAFGSVAVLSQEQLEEL 293 (460)
Q Consensus 215 ~~~l~~~~~~le~~~~~~~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~ 293 (460)
+.++..+.+.++............+.+... ....+..+| ....+++++|++++||......+.+..+
T Consensus 196 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 196 NPFIDIFPPSLQEPEFRARPRRHELRPVPF------------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp CCEEECSCGGGSCHHHHTCTTEEECCCCCC------------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred CeEEeeCCHHhcCCcccCCCCcceeeccCC------------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 677777777776542211111111111100 111222355 2333457799999999876677888999
Q ss_pred HHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhhhcCCceee
Q 012594 294 ALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLC 373 (460)
Q Consensus 294 ~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~ 373 (460)
++++++.+.+++|..++.... ..+. ..++|+.+.+|+|+.++|+++++ ||+|||.+|++||+++|+|+|+
T Consensus 264 ~~~l~~~~~~~~~~~g~~~~~---~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~ 333 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSLDV---SGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLS 333 (412)
T ss_dssp HHHHHTSSSEEEEECCSSCCC---TTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHcCCCEEEEEECCCCCh---hhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEe
Confidence 999998888998888755211 1111 13678999999999999988666 9999999999999999999999
Q ss_pred ccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012594 374 WPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVS 453 (460)
Q Consensus 374 ~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 453 (460)
+|...||..|++++++ .|+|..+.. +.++++.|+++|.++|+|+++++++.+.++++.+ ..+..+.++.+.+
T Consensus 334 ~p~~~~q~~~~~~v~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 405 (412)
T 3otg_A 334 FPWAGDSFANAQAVAQ-AGAGDHLLP---DNISPDSVSGAAKRLLAEESYRAGARAVAAEIAA----MPGPDEVVRLLPG 405 (412)
T ss_dssp CCCSTTHHHHHHHHHH-HTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH----SCCHHHHHTTHHH
T ss_pred cCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc----CCCHHHHHHHHHH
Confidence 9999999999999999 599999975 5679999999999999999999999999999987 4554444444433
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2.5e-29 Score=239.09 Aligned_cols=319 Identities=13% Similarity=0.082 Sum_probs=196.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc--hhHHhhccCccccCCCCeEEEEcCCC-CCCCCcCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM--HAKITASMPQKAEQSSLITMVSIPDG-LESHEADR 77 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~ 77 (460)
|.+ ||+|...|+.||++|.++||++|+++||+|+|+++... .+.+.+. +++++.++.. +...
T Consensus 1 M~~--~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~~~~~~---- 65 (365)
T 3s2u_A 1 MKG--NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVSGLRGK---- 65 (365)
T ss_dssp --C--EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC-----------
T ss_pred CCC--cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECCCcCCC----
Confidence 666 99999999999999999999999999999999998754 3445555 7888888732 2111
Q ss_pred ccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHhCCceEEEcccchHHHHHHHhhhhHh
Q 012594 78 RDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQMGIARAAVIPYAPASLALVLHAPKLV 155 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 155 (460)
.....+......+ ..+....+.+++ .+||+||++..+. .+..+|+.+|||++.....
T Consensus 66 -~~~~~~~~~~~~~-~~~~~~~~~l~~----~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n--------------- 124 (365)
T 3s2u_A 66 -GLKSLVKAPLELL-KSLFQALRVIRQ----LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN--------------- 124 (365)
T ss_dssp --------CHHHHH-HHHHHHHHHHHH----HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS---------------
T ss_pred -CHHHHHHHHHHHH-HHHHHHHHHHHh----cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc---------------
Confidence 1111111111111 112223334444 8999999997665 3456789999999953211
Q ss_pred hhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCccccccCCC
Q 012594 156 EAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPACDLIPN 235 (460)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p~ 235 (460)
.+|++. + +. ..+.++.++...... .+...+
T Consensus 125 ------------------~~~G~~-----------------n----r~------l~~~a~~v~~~~~~~-----~~~~~k 154 (365)
T 3s2u_A 125 ------------------AVAGTA-----------------N----RS------LAPIARRVCEAFPDT-----FPASDK 154 (365)
T ss_dssp ------------------SSCCHH-----------------H----HH------HGGGCSEEEESSTTS-----SCC---
T ss_pred ------------------hhhhhH-----------------H----Hh------hccccceeeeccccc-----ccCcCc
Confidence 011100 0 00 012234443332211 122345
Q ss_pred eeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCC----CCEEEEEcCC
Q 012594 236 ILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQ----QPFLWVVRPD 311 (460)
Q Consensus 236 ~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~~ 311 (460)
.+++|+........ ... ......++++.|++..||.... ...+.+.++++.+. ..+++.++..
T Consensus 155 ~~~~g~pvr~~~~~-------~~~----~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~ 221 (365)
T 3s2u_A 155 RLTTGNPVRGELFL-------DAH----ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ 221 (365)
T ss_dssp CEECCCCCCGGGCC-------CTT----SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT
T ss_pred EEEECCCCchhhcc-------chh----hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc
Confidence 66777655433211 000 1112223466899999987542 33344556665443 3456665533
Q ss_pred CCccccCCCchhHHhhhCCCcEEeeccCch-hhcCCCcccceeeccChhhhhHhhhcCCceeecccc----chhhhhHHH
Q 012594 312 FMNKSHAKLPDGFVERVSDRGKLVEWAPQE-KVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYF----ADQYQNRNY 386 (460)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~----~dQ~~~a~~ 386 (460)
...... ......+.++.+.+|+++. ++|+.+++ +|||+|.+|+.|++++|+|+|.+|+. .+|..||+.
T Consensus 222 ----~~~~~~-~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~ 294 (365)
T 3s2u_A 222 ----HAEITA-ERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEF 294 (365)
T ss_dssp ----THHHHH-HHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHH
T ss_pred ----cccccc-ceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHH
Confidence 111111 1122346788999999985 69977666 99999999999999999999999874 589999999
Q ss_pred HHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHH
Q 012594 387 IFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALK 429 (460)
Q Consensus 387 v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~ 429 (460)
+++ .|+|..+.. .+++++.|.++|.++|+|++.++++.+
T Consensus 295 l~~-~G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~~m~~ 333 (365)
T 3s2u_A 295 LVR-SGAGRLLPQ---KSTGAAELAAQLSEVLMHPETLRSMAD 333 (365)
T ss_dssp HHT-TTSEEECCT---TTCCHHHHHHHHHHHHHCTHHHHHHHH
T ss_pred HHH-CCCEEEeec---CCCCHHHHHHHHHHHHCCHHHHHHHHH
Confidence 999 599999974 778999999999999999875544333
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=202.33 Aligned_cols=163 Identities=25% Similarity=0.463 Sum_probs=139.8
Q ss_pred CCCCchhhhhccCCCCcEEEEEcCCCc-CCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEe
Q 012594 257 PEDSTCLGWLDKQAVGSVIYVAFGSVA-VLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLV 335 (460)
Q Consensus 257 ~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 335 (460)
+.+.++.+|++..+++++||+++||.. ....+.+..+++++++.+.+++|+.++.. ++. .++|+++.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~~----~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------PDT----LGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------CTT----CCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------ccc----CCCcEEEe
Confidence 467788999987766789999999985 45678889999999888889999886441 111 25689999
Q ss_pred eccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHH
Q 012594 336 EWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVK 415 (460)
Q Consensus 336 ~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~ 415 (460)
+|+|+.++|.|+.+++||||||.+|++||+++|+|+|++|...||..||+++++ .|+|+.++. ..++.+.|.++|.
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHH
Confidence 999999999888888899999999999999999999999999999999999999 599999975 6689999999999
Q ss_pred HHhcChHHHHHHHHHHHHHH
Q 012594 416 ALLNDGGIKANALKMKQMAR 435 (460)
Q Consensus 416 ~~l~~~~~~~~a~~l~~~~~ 435 (460)
++++|++|+++++++++.++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQH 169 (170)
T ss_dssp HHHHCHHHHHHHHHHC----
T ss_pred HHHcCHHHHHHHHHHHHHhh
Confidence 99999999999999999886
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.90 E-value=1.1e-21 Score=186.99 Aligned_cols=321 Identities=14% Similarity=0.061 Sum_probs=197.7
Q ss_pred CCCC--CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccch--hHHhhccCccccCCCCeEEEEcCCCCCCCCcC
Q 012594 1 MDRE--PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH--AKITASMPQKAEQSSLITMVSIPDGLESHEAD 76 (460)
Q Consensus 1 m~~~--~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 76 (460)
|+++ +||++++.+..||..++..|+++|+++||+|++++..... ..+.+. +++++.++.......
T Consensus 1 mM~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~-- 69 (364)
T 1f0k_A 1 MMSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH---------GIEIDFIRISGLRGK-- 69 (364)
T ss_dssp ------CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG---------TCEEEECCCCCCTTC--
T ss_pred CCCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc---------CCceEEecCCccCcC--
Confidence 4444 7999999888899999999999999999999999986532 233333 788877763211111
Q ss_pred cccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCc--chHHHHHHHhCCceEEEcccchHHHHHHHhhhhH
Q 012594 77 RRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTV--GWALEVAEQMGIARAAVIPYAPASLALVLHAPKL 154 (460)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (460)
.....+...... ...+..+.+.++. .+||+|+++... ..+..+++.+|+|+|.......
T Consensus 70 --~~~~~~~~~~~~-~~~~~~l~~~l~~----~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------ 130 (364)
T 1f0k_A 70 --GIKALIAAPLRI-FNAWRQARAIMKA----YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------ 130 (364)
T ss_dssp --CHHHHHTCHHHH-HHHHHHHHHHHHH----HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------
T ss_pred --ccHHHHHHHHHH-HHHHHHHHHHHHh----cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------
Confidence 111111110000 1123344444444 899999998643 2456678889999985332110
Q ss_pred hhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCccccccCC
Q 012594 155 VEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPACDLIP 234 (460)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~~p 234 (460)
++ ..... ....++.+++.+... .+
T Consensus 131 ---------------------~~---------------------~~~~~------~~~~~d~v~~~~~~~--------~~ 154 (364)
T 1f0k_A 131 ---------------------AG---------------------LTNKW------LAKIATKVMQAFPGA--------FP 154 (364)
T ss_dssp ---------------------CC---------------------HHHHH------HTTTCSEEEESSTTS--------SS
T ss_pred ---------------------Cc---------------------HHHHH------HHHhCCEEEecChhh--------cC
Confidence 00 00000 123456666544322 12
Q ss_pred CeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhC--CCCEEEEEcCCC
Q 012594 235 NILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESL--QQPFLWVVRPDF 312 (460)
Q Consensus 235 ~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~ 312 (460)
++..+|........ ..+. ....+...++++++++..|+.. ..+....++++++.+ +.+++++++.+.
T Consensus 155 ~~~~i~n~v~~~~~--------~~~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~ 223 (364)
T 1f0k_A 155 NAEVVGNPVRTDVL--------ALPL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGS 223 (364)
T ss_dssp SCEECCCCCCHHHH--------TSCC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTC
T ss_pred CceEeCCccchhhc--------ccch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCch
Confidence 45556543321111 0111 1122222334557888888754 355556666777554 355566665441
Q ss_pred CccccCCCchhHHh---hhC-CCcEEeeccCc-hhhcCCCcccceeeccChhhhhHhhhcCCceeecccc---chhhhhH
Q 012594 313 MNKSHAKLPDGFVE---RVS-DRGKLVEWAPQ-EKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYF---ADQYQNR 384 (460)
Q Consensus 313 ~~~~~~~~~~~~~~---~~~-~~v~~~~~~p~-~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~---~dQ~~~a 384 (460)
.+.+.+ +.. ++|.+.+|+++ ..+|..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+
T Consensus 224 --------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~ 293 (364)
T 1f0k_A 224 --------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNA 293 (364)
T ss_dssp --------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHH
T ss_pred --------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHH
Confidence 122221 112 58999999954 568977666 99999999999999999999999987 7999999
Q ss_pred HHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 012594 385 NYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMA 434 (460)
Q Consensus 385 ~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~ 434 (460)
+.+.+ .|.|..++. ++++.+.|+++|.++ |++.+++..+-+.++
T Consensus 294 ~~~~~-~g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~ 337 (364)
T 1f0k_A 294 LPLEK-AGAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAA 337 (364)
T ss_dssp HHHHH-TTSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHT
T ss_pred HHHHh-CCcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHh
Confidence 99998 499998865 556799999999988 777666655555443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.72 E-value=1.9e-16 Score=142.73 Aligned_cols=114 Identities=9% Similarity=0.074 Sum_probs=86.4
Q ss_pred CcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhh--hCCCcEEeeccCch-hhcCCCc
Q 012594 272 GSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVER--VSDRGKLVEWAPQE-KVLGHPS 348 (460)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~-~ll~~~~ 348 (460)
.+.|+|++|... ..+....+++++.... ++.++.+.+ ....+.+.+. ..+|+.+.+|+++. ++|..++
T Consensus 157 ~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 458999999753 3345666778876544 566666654 1122333221 23589999999987 5997666
Q ss_pred ccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEee
Q 012594 349 VACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFF 398 (460)
Q Consensus 349 ~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~ 398 (460)
+ +|++|| +|+.|++++|+|+|++|...+|..||+.+++ .|++..+.
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~ 273 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYK 273 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcc
Confidence 6 999999 8999999999999999999999999999999 59999985
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.60 E-value=2e-15 Score=130.29 Aligned_cols=132 Identities=11% Similarity=0.105 Sum_probs=93.5
Q ss_pred CCCCcEEEEEcCCCcCCCHHHHHHH-----HHHHHhCC-CCEEEEEcCCCCccccCCCchhHHhhh--------------
Q 012594 269 QAVGSVIYVAFGSVAVLSQEQLEEL-----ALGLESLQ-QPFLWVVRPDFMNKSHAKLPDGFVERV-------------- 328 (460)
Q Consensus 269 ~~~~~~v~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~-------------- 328 (460)
.++++.|||+.||... -.+.+..+ ++++...+ .++++.++.... .....+.+..
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~-----~~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYS-----SEFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSC-----CCCCSHHHHHTCEECSCCCSSCTT
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCch-----hhHHHHHHhhhccccccccccccc
Confidence 3457799999999732 34444443 47887777 688888876521 0011000000
Q ss_pred ------------CC--CcEEeeccCch-hhcC-CCcccceeeccChhhhhHhhhcCCceeecccc----chhhhhHHHHH
Q 012594 329 ------------SD--RGKLVEWAPQE-KVLG-HPSVACFLSHCGWNSTLEGLSMGVPFLCWPYF----ADQYQNRNYIF 388 (460)
Q Consensus 329 ------------~~--~v~~~~~~p~~-~ll~-~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~----~dQ~~~a~~v~ 388 (460)
.. ++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||++++
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~ 176 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFV 176 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHH
T ss_pred cccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHH
Confidence 12 34456888876 7897 6666 99999999999999999999999984 47999999999
Q ss_pred hhhcceeEeecCCCCccCHHHHHHHHHHH
Q 012594 389 DAWKIGLRFFPDENGIITRQEIQRQVKAL 417 (460)
Q Consensus 389 ~~lg~g~~~~~~~~~~~~~~~l~~~i~~~ 417 (460)
+ .|+|+.+ +.+.|.++|.++
T Consensus 177 ~-~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 177 E-LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp H-HSCCCEE--------CSCTTTHHHHHH
T ss_pred H-CCCEEEc--------CHHHHHHHHHHH
Confidence 9 5998765 456677777776
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.55 E-value=2.7e-12 Score=125.15 Aligned_cols=366 Identities=12% Similarity=0.084 Sum_probs=186.4
Q ss_pred CCCEEEEEcC-----------CCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCC
Q 012594 3 REPHVLVIPF-----------PAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLE 71 (460)
Q Consensus 3 ~~~~Il~~~~-----------~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 71 (460)
++|||++++. ...|+-.....|++.|.++||+|++++........... ....++.++.++....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RVAENLRVINIAAGPY 93 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EEETTEEEEEECCSCS
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cccCCeEEEEecCCCc
Confidence 4679999985 24688889999999999999999999876432211000 0113777777764322
Q ss_pred CCCcCcccHHHHHHHHHhhchHHHHHHHHH-HhhcCCCCCccEEEeCCCcc--hHHHHHHHhCCceEEEcccchHHHHHH
Q 012594 72 SHEADRRDLHKVRQSMLTVMPGCLRNLIEK-VNKSNDCEKISCVIADLTVG--WALEVAEQMGIARAAVIPYAPASLALV 148 (460)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~ 148 (460)
... ...+....+..+ .+.+++. ++.. .+||+|++..... .+..+++.+++|+|...........
T Consensus 94 ~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-- 160 (438)
T 3c48_A 94 EGL-SKEELPTQLAAF-------TGGMLSFTRREK---VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN-- 160 (438)
T ss_dssp SSC-CGGGGGGGHHHH-------HHHHHHHHHHHT---CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS--
T ss_pred ccc-chhHHHHHHHHH-------HHHHHHHHHhcc---CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc--
Confidence 111 111221111111 1122222 2220 2499999875332 3445678889999976655432100
Q ss_pred HhhhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCcc
Q 012594 149 LHAPKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPP 228 (460)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~ 228 (460)
..+. . ............ ....+..+|.+++.+....+.-
T Consensus 161 ---------------------------~~~~---------~---~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~ 199 (438)
T 3c48_A 161 ---------------------------SYRD---------D---SDTPESEARRIC--EQQLVDNADVLAVNTQEEMQDL 199 (438)
T ss_dssp ---------------------------CC----------------CCHHHHHHHHH--HHHHHHHCSEEEESSHHHHHHH
T ss_pred ---------------------------cccc---------c---cCCcchHHHHHH--HHHHHhcCCEEEEcCHHHHHHH
Confidence 0000 0 000000000110 0113456888888886654322
Q ss_pred cc--ccC-CCeeeeCccCCCCCccCccCCCCCCC-Cc---hhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhC-
Q 012594 229 AC--DLI-PNILTIGPLLGRDHLEHSAVNFWPED-ST---CLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESL- 300 (460)
Q Consensus 229 ~~--~~~-p~~~~vGp~~~~~~~~~~~~~~~~~~-~~---l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~- 300 (460)
.. ... .++..+.......... +.+ .. +.+-+...+ +..+++..|+... .+.+..+++++..+
T Consensus 200 ~~~~g~~~~k~~vi~ngvd~~~~~-------~~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~ 269 (438)
T 3c48_A 200 MHHYDADPDRISVVSPGADVELYS-------PGNDRATERSRRELGIPL-HTKVVAFVGRLQP--FKGPQVLIKAVAALF 269 (438)
T ss_dssp HHHHCCCGGGEEECCCCCCTTTSC-------CC----CHHHHHHTTCCS-SSEEEEEESCBSG--GGCHHHHHHHHHHHH
T ss_pred HHHhCCChhheEEecCCccccccC-------CcccchhhhhHHhcCCCC-CCcEEEEEeeecc--cCCHHHHHHHHHHHH
Confidence 11 111 2344454332221111 111 11 222222222 3366777787632 23344444444322
Q ss_pred ----CCCE-EEEEcCCCCccccCCCchhHH---hh--hCCCcEEeeccCch---hhcCCCcccceeec----cChhhhhH
Q 012594 301 ----QQPF-LWVVRPDFMNKSHAKLPDGFV---ER--VSDRGKLVEWAPQE---KVLGHPSVACFLSH----CGWNSTLE 363 (460)
Q Consensus 301 ----~~~~-i~~~~~~~~~~~~~~~~~~~~---~~--~~~~v~~~~~~p~~---~ll~~~~~~~~I~h----gG~~sv~e 363 (460)
+..+ +++++..... +...+.+. ++ ..++|.+.+++|+. .+|..+++ +|.- |...+++|
T Consensus 270 ~~~p~~~~~l~i~G~~~~~---g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~E 344 (438)
T 3c48_A 270 DRDPDRNLRVIICGGPSGP---NATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAME 344 (438)
T ss_dssp HHCTTCSEEEEEECCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHH
T ss_pred hhCCCcceEEEEEeCCCCC---CcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHH
Confidence 1133 3333431000 01112221 11 24789999999875 47767666 6643 33568999
Q ss_pred hhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHH----HHHHHHHHHHHHHhh
Q 012594 364 GLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIK----ANALKMKQMARKSLV 439 (460)
Q Consensus 364 al~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~----~~a~~l~~~~~~~~~ 439 (460)
|+++|+|+|+.+ .......+.+. +.|..++ .-+.++++++|.++++|++.+ +++++..+.+.-
T Consensus 345 ama~G~PvI~~~----~~~~~e~i~~~-~~g~~~~-----~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~--- 411 (438)
T 3c48_A 345 AQASGTPVIAAR----VGGLPIAVAEG-ETGLLVD-----GHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSW--- 411 (438)
T ss_dssp HHHTTCCEEEES----CTTHHHHSCBT-TTEEEES-----SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHcCCCEEecC----CCChhHHhhCC-CcEEECC-----CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCH---
Confidence 999999999975 34566666663 6788884 347899999999999988544 444444444321
Q ss_pred cCCChHHHHHHHHHHHHh
Q 012594 440 EGGSSFRNFESFVSQLKA 457 (460)
Q Consensus 440 ~~g~~~~~~~~~~~~l~~ 457 (460)
....+.+.++++++..
T Consensus 412 --~~~~~~~~~~~~~~~~ 427 (438)
T 3c48_A 412 --AATAAQLSSLYNDAIA 427 (438)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHhh
Confidence 1233344555555443
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.55 E-value=2e-13 Score=131.15 Aligned_cols=343 Identities=13% Similarity=0.056 Sum_probs=185.2
Q ss_pred CCCCCEEEEEcC--C--CccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcC
Q 012594 1 MDREPHVLVIPF--P--AQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEAD 76 (460)
Q Consensus 1 m~~~~~Il~~~~--~--~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 76 (460)
|++++||++++. + ..|.-..+..|++.| +||+|++++........... ....++.++.++....-..
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-- 71 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY-----DKTLDYEVIRWPRSVMLPT-- 71 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH-----HTTCSSEEEEESSSSCCSC--
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh-----ccccceEEEEccccccccc--
Confidence 888899999874 3 578888899999999 79999999987654321111 0113778877774321111
Q ss_pred cccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHhCCceEE-EcccchHHHHHHHhhhh
Q 012594 77 RRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQMGIARAA-VIPYAPASLALVLHAPK 153 (460)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~-~~~~~~~~~~~~~~~~~ 153 (460)
. .....+.++++. .+||+|++..... ....+++.+++|.++ .........
T Consensus 72 ---~---------~~~~~l~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------- 124 (394)
T 3okp_A 72 ---P---------TTAHAMAEIIRE-------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW-------- 124 (394)
T ss_dssp ---H---------HHHHHHHHHHHH-------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH--------
T ss_pred ---h---------hhHHHHHHHHHh-------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh--------
Confidence 0 011223444455 8999999865443 455668889998444 333221100
Q ss_pred HhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCcccccc-
Q 012594 154 LVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPACDL- 232 (460)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~- 232 (460)
. . ......... .....+|.+++.+....+.-....
T Consensus 125 -----------------------------------~--~----~~~~~~~~~---~~~~~~d~ii~~s~~~~~~~~~~~~ 160 (394)
T 3okp_A 125 -----------------------------------S--M----LPGSRQSLR---KIGTEVDVLTYISQYTLRRFKSAFG 160 (394)
T ss_dssp -----------------------------------T--T----SHHHHHHHH---HHHHHCSEEEESCHHHHHHHHHHHC
T ss_pred -----------------------------------h--h----cchhhHHHH---HHHHhCCEEEEcCHHHHHHHHHhcC
Confidence 0 0 000001111 123567888887766543221111
Q ss_pred -CCCeeeeCccCCCCCccCccCCCCCCC----CchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhC-----CC
Q 012594 233 -IPNILTIGPLLGRDHLEHSAVNFWPED----STCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESL-----QQ 302 (460)
Q Consensus 233 -~p~~~~vGp~~~~~~~~~~~~~~~~~~----~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~ 302 (460)
..++..+..-....... +.. .++.+.+.. +++..+++..|+.. ..+.+..++++++.+ +.
T Consensus 161 ~~~~~~vi~ngv~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~ 230 (394)
T 3okp_A 161 SHPTFEHLPSGVDVKRFT-------PATPEDKSATRKKLGF-TDTTPVIACNSRLV--PRKGQDSLIKAMPQVIAARPDA 230 (394)
T ss_dssp SSSEEEECCCCBCTTTSC-------CCCHHHHHHHHHHTTC-CTTCCEEEEESCSC--GGGCHHHHHHHHHHHHHHSTTC
T ss_pred CCCCeEEecCCcCHHHcC-------CCCchhhHHHHHhcCC-CcCceEEEEEeccc--cccCHHHHHHHHHHHHhhCCCe
Confidence 22444454322211110 101 111222222 22336677778753 233344444554322 34
Q ss_pred CEEEEEcCCCCccccCCCchhHH---hhhCCCcEEeeccCchh---hcCCCcccceee-----------ccChhhhhHhh
Q 012594 303 PFLWVVRPDFMNKSHAKLPDGFV---ERVSDRGKLVEWAPQEK---VLGHPSVACFLS-----------HCGWNSTLEGL 365 (460)
Q Consensus 303 ~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~p~~~---ll~~~~~~~~I~-----------hgG~~sv~eal 365 (460)
+++++ +.+ ...+.+. ....+++.+.+++|+.+ ++..+++ +|. -|...++.||+
T Consensus 231 ~l~i~-G~g-------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~ 300 (394)
T 3okp_A 231 QLLIV-GSG-------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQ 300 (394)
T ss_dssp EEEEE-CCC-------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHH
T ss_pred EEEEE-cCc-------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHH
Confidence 44444 322 1111111 12357899999998765 6766666 776 56678999999
Q ss_pred hcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChH
Q 012594 366 SMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSF 445 (460)
Q Consensus 366 ~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~ 445 (460)
++|+|+|+.+.. .....+.+ |.|..++ .-+.++++++|.++++|++.+++..+-+.+... +.-+..
T Consensus 301 a~G~PvI~~~~~----~~~e~i~~--~~g~~~~-----~~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~---~~~s~~ 366 (394)
T 3okp_A 301 ACGVPVIAGTSG----GAPETVTP--ATGLVVE-----GSDVDKLSELLIELLDDPIRRAAMGAAGRAHVE---AEWSWE 366 (394)
T ss_dssp HTTCCEEECSST----TGGGGCCT--TTEEECC-----TTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH---HHTBHH
T ss_pred HcCCCEEEeCCC----ChHHHHhc--CCceEeC-----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH---HhCCHH
Confidence 999999998653 33334443 5777774 347999999999999988654443333322221 123444
Q ss_pred HHHHHHHHHHHh
Q 012594 446 RNFESFVSQLKA 457 (460)
Q Consensus 446 ~~~~~~~~~l~~ 457 (460)
..++.+.+-+.+
T Consensus 367 ~~~~~~~~~~~~ 378 (394)
T 3okp_A 367 IMGERLTNILQS 378 (394)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHHH
Confidence 555555555443
No 27
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.48 E-value=1.8e-11 Score=121.43 Aligned_cols=357 Identities=13% Similarity=0.077 Sum_probs=180.7
Q ss_pred CCCCCEEEEEcCC---------------CccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCcccc--CCCCeEE
Q 012594 1 MDREPHVLVIPFP---------------AQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAE--QSSLITM 63 (460)
Q Consensus 1 m~~~~~Il~~~~~---------------~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 63 (460)
|.++|||++++.. ..|.-.....|++.|.++||+|++++................. ...++.+
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v 83 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRI 83 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEE
Confidence 4556899999852 4677788999999999999999999875432110000000000 0247888
Q ss_pred EEcCCCCCCCCcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHhCCceEEEcccc
Q 012594 64 VSIPDGLESHEADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 64 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~ 141 (460)
+.++....... ....+...+..+ ...+.+.++... .+||+|.+..... .+..+++.+|+|+|...+..
T Consensus 84 ~~~~~~~~~~~-~~~~~~~~~~~~-------~~~l~~~l~~~~--~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~ 153 (499)
T 2r60_A 84 VRIPFGGDKFL-PKEELWPYLHEY-------VNKIINFYREEG--KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSL 153 (499)
T ss_dssp EEECCSCSSCC-CGGGCGGGHHHH-------HHHHHHHHHHHT--CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSC
T ss_pred EEecCCCcCCc-CHHHHHHHHHHH-------HHHHHHHHHhcC--CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCc
Confidence 88774322111 111111111111 122222232211 3799999875322 33456788899999766654
Q ss_pred hHHHHHHHhhhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHH--HHHHHHHHhhcccccEEEE
Q 012594 142 PASLALVLHAPKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLF--FGACSAVAQNLKISNWILC 219 (460)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~ 219 (460)
...... .... . ... .......+ .....-....+..+|.+++
T Consensus 154 ~~~~~~----------~~~~--------------~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~ad~vi~ 196 (499)
T 2r60_A 154 GAQKME----------KLNV--------------N------------TSN-FKEMDERFKFHRRIIAERLTMSYADKIIV 196 (499)
T ss_dssp HHHHHH----------TTCC--------------C------------STT-SHHHHHHHCHHHHHHHHHHHHHHCSEEEE
T ss_pred ccccch----------hhcc--------------C------------CCC-cchhhhhHHHHHHHHHHHHHHhcCCEEEE
Confidence 322110 0000 0 000 00000000 0000001123467888888
Q ss_pred ccccccCccccc-----c----C-CCeeeeCccCCCCCccCccCCCCCCC-----Cchhhhhc-----cCCCCcEEEEEc
Q 012594 220 NSFYELDPPACD-----L----I-PNILTIGPLLGRDHLEHSAVNFWPED-----STCLGWLD-----KQAVGSVIYVAF 279 (460)
Q Consensus 220 ~~~~~le~~~~~-----~----~-p~~~~vGp~~~~~~~~~~~~~~~~~~-----~~l~~~l~-----~~~~~~~v~vs~ 279 (460)
.+...-+.-... . . .++..+..-...... .+.+ .++.+-+. ..+ +..+++..
T Consensus 197 ~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~-------~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~i~~v 268 (499)
T 2r60_A 197 STSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVF-------DGEYGDKIKAKITKYLERDLGSERM-ELPAIIAS 268 (499)
T ss_dssp SSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTS-------SSCCCHHHHHHHHHHHHHHSCGGGT-TSCEEEEC
T ss_pred CCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhc-------CccchhhhHHHHHHHhcccccccCC-CCcEEEEe
Confidence 887653321011 1 1 234444322211111 0111 11222222 112 22567777
Q ss_pred CCCcCCCHHHHHHHHHHHHhCCC----C-EEEEEcCCCCc-cccCCC-------chhHHh---h--hCCCcEEeeccCch
Q 012594 280 GSVAVLSQEQLEELALGLESLQQ----P-FLWVVRPDFMN-KSHAKL-------PDGFVE---R--VSDRGKLVEWAPQE 341 (460)
Q Consensus 280 Gs~~~~~~~~~~~~~~a~~~~~~----~-~i~~~~~~~~~-~~~~~~-------~~~~~~---~--~~~~v~~~~~~p~~ 341 (460)
|+.. ..+.+..+++++..+.. . .+++++..... .....+ .+.+.+ + ..++|.+.+++|+.
T Consensus 269 Grl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~ 346 (499)
T 2r60_A 269 SRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQ 346 (499)
T ss_dssp SCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHH
T ss_pred ecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHH
Confidence 8753 34556667777765531 2 34555542000 000001 112211 1 24789999999876
Q ss_pred h---hcCCC----cccceee----ccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHH
Q 012594 342 K---VLGHP----SVACFLS----HCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEI 410 (460)
Q Consensus 342 ~---ll~~~----~~~~~I~----hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l 410 (460)
+ ++..+ ++ +|. -|-..+++||+++|+|+|+.. -......+.+. +.|..++. -+.+++
T Consensus 347 ~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~~~-----~d~~~l 414 (499)
T 2r60_A 347 ELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLVDP-----EDPEDI 414 (499)
T ss_dssp HHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEECT-----TCHHHH
T ss_pred HHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEeCC-----CCHHHH
Confidence 4 67666 65 663 244568999999999999985 34556666653 57888843 478999
Q ss_pred HHHHHHHhcChHHHHH
Q 012594 411 QRQVKALLNDGGIKAN 426 (460)
Q Consensus 411 ~~~i~~~l~~~~~~~~ 426 (460)
+++|.++++|++.+++
T Consensus 415 a~~i~~ll~~~~~~~~ 430 (499)
T 2r60_A 415 ARGLLKAFESEETWSA 430 (499)
T ss_dssp HHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHhCHHHHHH
Confidence 9999999998865443
No 28
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.48 E-value=5.7e-13 Score=127.59 Aligned_cols=136 Identities=15% Similarity=0.131 Sum_probs=85.9
Q ss_pred CCcEEEEEcCCCcCCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCccccCCCchhHHhh--hCCCcEEeeccCc---
Q 012594 271 VGSVIYVAFGSVAVLSQEQLEELALGLESL-----QQPFLWVVRPDFMNKSHAKLPDGFVER--VSDRGKLVEWAPQ--- 340 (460)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~--- 340 (460)
++++++++.|+..... +.+..+++++..+ +.++++..+.+ ....+.+.+. ..++|.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 3557888888754322 3455566665432 33444432311 0011112211 1368999777765
Q ss_pred hhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcC
Q 012594 341 EKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLND 420 (460)
Q Consensus 341 ~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 420 (460)
..+|..+++ +|+.+| ++++||+++|+|+|+.+...+... +.+ .|.|..++ . +.+.|+++|.++++|
T Consensus 277 ~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~-----~-d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVG-----T-DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEEC-----S-SHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeC-----C-CHHHHHHHHHHHHhC
Confidence 357877666 998875 458999999999999987443332 344 38888883 2 899999999999998
Q ss_pred hHHHHHH
Q 012594 421 GGIKANA 427 (460)
Q Consensus 421 ~~~~~~a 427 (460)
++.+++.
T Consensus 343 ~~~~~~~ 349 (384)
T 1vgv_A 343 ENEYQAM 349 (384)
T ss_dssp HHHHHHH
T ss_pred hHHHhhh
Confidence 8655443
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.47 E-value=1.1e-11 Score=120.73 Aligned_cols=388 Identities=13% Similarity=0.016 Sum_probs=187.5
Q ss_pred CCCEEEEEcCC-----CccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhh---------ccCc--cccCCCCeEEEEc
Q 012594 3 REPHVLVIPFP-----AQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITA---------SMPQ--KAEQSSLITMVSI 66 (460)
Q Consensus 3 ~~~~Il~~~~~-----~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~---------~~~~--~~~~~~~~~~~~i 66 (460)
++|||++++.. ..|--.-+..|+++|+++||+|+++++......-.. .... ......++.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 46899998832 456666789999999999999999996432211000 0000 0001247777777
Q ss_pred CCCCCCCCcCcccHHHH-HHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHhCCceEEEcccchH
Q 012594 67 PDGLESHEADRRDLHKV-RQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQMGIARAAVIPYAPA 143 (460)
Q Consensus 67 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~ 143 (460)
+................ ...+. .+...+..+++.+.... .+||+|.+..... .+..+++..++|+|........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAV-TFGRASVLLLNDLLREE--PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHH-HHHHHHHHHHHHHTTTS--CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred cchhccccccccCCcchhhhhhH-HHHHHHHHHHHHHhccC--CCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 64111111011111111 12211 11223344444431111 7999999886443 3456677889999986654431
Q ss_pred HHHHHHhhhhHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEcccc
Q 012594 144 SLALVLHAPKLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFY 223 (460)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 223 (460)
... +.... ....+. ... .... . .+... .+..+|.++..+..
T Consensus 158 ~~~-----~~~~~-----------------~~~~~~-----~~~--~~~~---~-~~~~~------~~~~ad~ii~~S~~ 198 (439)
T 3fro_A 158 SKL-----PAFYF-----------------HEAGLS-----ELA--PYPD---I-DPEHT------GGYIADIVTTVSRG 198 (439)
T ss_dssp CCE-----EHHHH-----------------HHTTCG-----GGC--CSSE---E-CHHHH------HHHHCSEEEESCHH
T ss_pred ccC-----chHHh-----------------Cccccc-----ccc--ccce---e-eHhhh------hhhhccEEEecCHH
Confidence 000 00000 000000 000 0000 0 01111 23467888887765
Q ss_pred ccCcccc--cc-CCCeeeeCccCCCCCccCccCCCCC----CCCchhhhhccCCCCcEEEEEcCCCc-C-CCHHHHHHHH
Q 012594 224 ELDPPAC--DL-IPNILTIGPLLGRDHLEHSAVNFWP----EDSTCLGWLDKQAVGSVIYVAFGSVA-V-LSQEQLEELA 294 (460)
Q Consensus 224 ~le~~~~--~~-~p~~~~vGp~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~~~~~v~vs~Gs~~-~-~~~~~~~~~~ 294 (460)
..+.... +. ..++..+..-........ ..... ...++.+-+... ++ .+++..|+.. . ...+.+-..+
T Consensus 199 ~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~ 274 (439)
T 3fro_A 199 YLIDEWGFFRNFEGKITYVFNGIDCSFWNE--SYLTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAI 274 (439)
T ss_dssp HHHHTHHHHGGGTTSEEECCCCCCTTTSCG--GGSCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHH
T ss_pred HHHHHhhhhhhcCCceeecCCCCCchhcCc--ccccchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHH
Confidence 4432111 11 234444432221111000 00000 011112222222 23 7778888865 2 2333333333
Q ss_pred HHHHh----CCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchh---hcCCCcccceee----ccChhhhhH
Q 012594 295 LGLES----LQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEK---VLGHPSVACFLS----HCGWNSTLE 363 (460)
Q Consensus 295 ~a~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~---ll~~~~~~~~I~----hgG~~sv~e 363 (460)
..+.. .+.++++ ++.+... ....-..+.++.+.++.+.+|+|+.+ ++..+++ +|. -|-..++.|
T Consensus 275 ~~l~~~~~~~~~~l~i-~G~g~~~--~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~E 349 (439)
T 3fro_A 275 EILSSKKEFQEMRFII-IGKGDPE--LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALE 349 (439)
T ss_dssp HHHHTSGGGGGEEEEE-ECCCCHH--HHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHH
T ss_pred HHHHhcccCCCeEEEE-EcCCChh--HHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHH
Confidence 33433 2334433 3322000 00001112222344455779999864 6777776 662 344578999
Q ss_pred hhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHhhcCC
Q 012594 364 GLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLN-DGGIKANALKMKQMARKSLVEGG 442 (460)
Q Consensus 364 al~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~-~~~~~~~a~~l~~~~~~~~~~~g 442 (460)
|+++|+|+|+.. .......+.. |.|..++ .-+.++++++|.++++ |++.+++..+-+.+..+ .-
T Consensus 350 Ama~G~Pvi~s~----~~~~~e~~~~--~~g~~~~-----~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~----~~ 414 (439)
T 3fro_A 350 AMCLGAIPIASA----VGGLRDIITN--ETGILVK-----AGDPGELANAILKALELSRSDLSKFRENCKKRAM----SF 414 (439)
T ss_dssp HHHTTCEEEEES----STHHHHHCCT--TTCEEEC-----TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH----TS
T ss_pred HHHCCCCeEEcC----CCCcceeEEc--CceEEeC-----CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh----hC
Confidence 999999999974 4455555543 7888884 3479999999999998 77544443333333332 34
Q ss_pred ChHHHHHHHHHHHH
Q 012594 443 SSFRNFESFVSQLK 456 (460)
Q Consensus 443 ~~~~~~~~~~~~l~ 456 (460)
+....++.+.+-+.
T Consensus 415 s~~~~~~~~~~~~~ 428 (439)
T 3fro_A 415 SWEKSAERYVKAYT 428 (439)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 55555555555443
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.45 E-value=1.3e-12 Score=125.42 Aligned_cols=322 Identities=12% Similarity=0.051 Sum_probs=165.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCccch----hHHhhccCccccCCCCeEE-EEcCCCCCCCCc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEHMH----AKITASMPQKAEQSSLITM-VSIPDGLESHEA 75 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~ 75 (460)
+++||++++ |+.....=+..|.++|.++ |+++.++.+.... +.++.. ++.. +.+.-..
T Consensus 26 ~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~---------~i~~~~~l~v~~----- 90 (403)
T 3ot5_A 26 AKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIF---------DIKPDIDLDIMK----- 90 (403)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHT---------TCCCSEECCCCC-----
T ss_pred ccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhc---------CCCCCcccccCC-----
Confidence 346888887 7777777778999999987 6888766665331 222222 2311 1121110
Q ss_pred CcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCC--Cc-chHHHHHHHhCCceEEEcccchHHHHHHHhhh
Q 012594 76 DRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADL--TV-GWALEVAEQMGIARAAVIPYAPASLALVLHAP 152 (460)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 152 (460)
...++... .... ...+.++++. .+||+|++-. .. ..+..+|..+|||++.+....-
T Consensus 91 ~~~~~~~~---~~~~-~~~l~~~l~~-------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglr---------- 149 (403)
T 3ot5_A 91 KGQTLAEI---TSRV-MNGINEVIAA-------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLR---------- 149 (403)
T ss_dssp -CCCHHHH---HHHH-HHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCC----------
T ss_pred CCCCHHHH---HHHH-HHHHHHHHHH-------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc----------
Confidence 11122221 1111 1224455555 8999998732 22 2456788999999875332110
Q ss_pred hHhhhcCCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCccc-cc
Q 012594 153 KLVEAGLLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPA-CD 231 (460)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~-~~ 231 (460)
. +.+.. ............ ..++.+++.+...-+.-. .-
T Consensus 150 ---------------------------s-------~~~~~-~~p~~~~r~~~~------~~a~~~~~~se~~~~~l~~~G 188 (403)
T 3ot5_A 150 ---------------------------T-------WNKYS-PFPEEMNRQLTG------VMADIHFSPTKQAKENLLAEG 188 (403)
T ss_dssp ---------------------------C-------SCTTS-STTHHHHHHHHH------HHCSEEEESSHHHHHHHHHTT
T ss_pred ---------------------------c-------ccccc-CCcHHHHHHHHH------HhcCEEECCCHHHHHHHHHcC
Confidence 0 00000 000011111111 234666666544322110 11
Q ss_pred c-CCCeeeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhC-----CCCEE
Q 012594 232 L-IPNILTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESL-----QQPFL 305 (460)
Q Consensus 232 ~-~p~~~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i 305 (460)
. ..+++.+|....+...... .. ....+..+.+ ++++.++++.|...... +.+..+++++..+ +.+++
T Consensus 189 i~~~~i~vvGn~~~D~~~~~~--~~-~~~~~~~~~l---~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v 261 (403)
T 3ot5_A 189 KDPATIFVTGNTAIDALKTTV--QK-DYHHPILENL---GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELV 261 (403)
T ss_dssp CCGGGEEECCCHHHHHHHHHS--CT-TCCCHHHHSC---TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEE
T ss_pred CCcccEEEeCCchHHHHHhhh--hh-hcchHHHHhc---cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEE
Confidence 1 2357788753322110000 00 0011222222 34557777765421111 1245566665432 34555
Q ss_pred EEEcCCCCccccCCCchhHHh--hhCCCcEEeeccCch---hhcCCCcccceeeccChhhhhHhhhcCCceeeccccchh
Q 012594 306 WVVRPDFMNKSHAKLPDGFVE--RVSDRGKLVEWAPQE---KVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQ 380 (460)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~---~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ 380 (460)
+....+. .+.+.+.+ ...+++++.+++++. .+++++++ +|+-.|..+ .||.++|+|+|++|-..++
T Consensus 262 ~~~~~~~------~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~ 332 (403)
T 3ot5_A 262 YPMHLNP------AVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTER 332 (403)
T ss_dssp EECCSCH------HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSC
T ss_pred EecCCCH------HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcc
Confidence 5433220 01111111 123689999988743 57866665 998875333 7999999999999766665
Q ss_pred hhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHH
Q 012594 381 YQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANAL 428 (460)
Q Consensus 381 ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~ 428 (460)
... .+. |.|+.+. . +.+.|.+++.++++|++.+++..
T Consensus 333 ~e~----v~~-g~~~lv~-----~-d~~~l~~ai~~ll~~~~~~~~m~ 369 (403)
T 3ot5_A 333 PEG----IEA-GTLKLIG-----T-NKENLIKEALDLLDNKESHDKMA 369 (403)
T ss_dssp HHH----HHH-TSEEECC-----S-CHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hhh----eeC-CcEEEcC-----C-CHHHHHHHHHHHHcCHHHHHHHH
Confidence 442 353 9888773 2 79999999999999887665544
No 31
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.45 E-value=1.4e-12 Score=124.60 Aligned_cols=136 Identities=16% Similarity=0.173 Sum_probs=85.8
Q ss_pred CcEEEEEcCCCcCCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCccccCCCchhHHhh--hCCCcEEeeccCc---h
Q 012594 272 GSVIYVAFGSVAVLSQEQLEELALGLESL-----QQPFLWVVRPDFMNKSHAKLPDGFVER--VSDRGKLVEWAPQ---E 341 (460)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~---~ 341 (460)
+++|+++.|...... .+..++++++.+ +.++++..+.+. ...+.+.+. ..+++++.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~------~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP------VVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH------HHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH------HHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457888777542221 355566666432 344444434220 011122211 1358999866655 4
Q ss_pred hhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcCh
Q 012594 342 KVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 342 ~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 421 (460)
.+|..+++ ||+.+| |.+.||+++|+|+|+.+...++... .+ .|.|..+. .+.+.|+++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~-~g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LK-AGILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HH-HTSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hc-CCceEECC------CCHHHHHHHHHHHHhCh
Confidence 68877666 998874 4567999999999998766665552 34 38888773 28999999999999988
Q ss_pred HHHHHHHH
Q 012594 422 GIKANALK 429 (460)
Q Consensus 422 ~~~~~a~~ 429 (460)
+.+++..+
T Consensus 336 ~~~~~~~~ 343 (376)
T 1v4v_A 336 EELSRMRK 343 (376)
T ss_dssp HHHHHHHH
T ss_pred Hhhhhhcc
Confidence 65554443
No 32
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.44 E-value=4.8e-12 Score=120.64 Aligned_cols=137 Identities=15% Similarity=0.091 Sum_probs=83.4
Q ss_pred CCcEEEEEcCCCcCCCHHHHHHHHHHHHhC---CCCEEEEEcCCCCccccCCCchhHHhhh--CCCcEEeeccCch---h
Q 012594 271 VGSVIYVAFGSVAVLSQEQLEELALGLESL---QQPFLWVVRPDFMNKSHAKLPDGFVERV--SDRGKLVEWAPQE---K 342 (460)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~p~~---~ 342 (460)
++++++++.|...... +.+..++++++.+ ...+.+.++.+.. ..+.+.+.+.. .+++.+.+++++. .
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 278 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHMN----PVVRETANDILGDYGRIHLIEPLDVIDFHN 278 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCSC----HHHHHHHHHHHTTCTTEEEECCCCHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCCC----HHHHHHHHHHhhccCCEEEeCCCCHHHHHH
Confidence 3557777888643221 3456677776533 1223233332210 00111121111 2689998877764 5
Q ss_pred hcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChH
Q 012594 343 VLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGG 422 (460)
Q Consensus 343 ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 422 (460)
+|..+++ +|+.+ .+++.||+++|+|+|+.+..... ...+ + .|.|..++ . +.++|+++|.++++|++
T Consensus 279 ~~~~ad~--~v~~s-g~~~lEA~a~G~Pvi~~~~~~~~---~e~v-~-~g~g~~v~-----~-d~~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 279 VAARSYL--MLTDS-GGVQEEAPSLGVPVLVLRDTTER---PEGI-E-AGTLKLAG-----T-DEETIFSLADELLSDKE 344 (375)
T ss_dssp HHHTCSE--EEECC-HHHHHHHHHHTCCEEECSSCCSC---HHHH-H-TTSEEECC-----S-CHHHHHHHHHHHHHCHH
T ss_pred HHHhCcE--EEECC-CChHHHHHhcCCCEEEecCCCCC---ceee-c-CCceEEcC-----C-CHHHHHHHHHHHHhChH
Confidence 7766666 88876 35589999999999998543332 2334 4 38888773 2 78999999999999886
Q ss_pred HHHH
Q 012594 423 IKAN 426 (460)
Q Consensus 423 ~~~~ 426 (460)
.+++
T Consensus 345 ~~~~ 348 (375)
T 3beo_A 345 AHDK 348 (375)
T ss_dssp HHHH
T ss_pred hHhh
Confidence 5544
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.43 E-value=8.1e-13 Score=126.59 Aligned_cols=138 Identities=15% Similarity=0.103 Sum_probs=85.1
Q ss_pred CCcEEEEEcCCCcCCCHHHHHHHHHHHHhC-----CCCEEEEEcCCCCccccCCCchhHHhh--hCCCcEEeeccCc---
Q 012594 271 VGSVIYVAFGSVAVLSQEQLEELALGLESL-----QQPFLWVVRPDFMNKSHAKLPDGFVER--VSDRGKLVEWAPQ--- 340 (460)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~--- 340 (460)
++++++++.+....... .+..+++|+..+ +.++++.++.+. ...+.+.+. ..+++++.+++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~------~~~~~l~~~~~~~~~v~~~~~lg~~~~ 301 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP------NVREPVNKLLKGVSNIVLIEPQQYLPF 301 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH------HHHHHHHHHTTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh------HHHHHHHHHHcCCCCEEEeCCCCHHHH
Confidence 45677777633222222 256677776543 345555443220 011112211 2468888877754
Q ss_pred hhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcC
Q 012594 341 EKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLND 420 (460)
Q Consensus 341 ~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 420 (460)
..+++.+++ +|+-+| |.+.||.++|+|+|+..-..++. . +.+. |.++.+. . +.+.|.+++.++++|
T Consensus 302 ~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~---e-~v~~-G~~~lv~-----~-d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 302 VYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP---E-AVAA-GTVKLVG-----T-NQQQICDALSLLLTD 367 (396)
T ss_dssp HHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH---H-HHHH-TSEEECT-----T-CHHHHHHHHHHHHHC
T ss_pred HHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch---H-HHHc-CceEEcC-----C-CHHHHHHHHHHHHcC
Confidence 357877666 999987 66689999999999985544543 2 3453 8886652 2 689999999999998
Q ss_pred hHHHHHHHH
Q 012594 421 GGIKANALK 429 (460)
Q Consensus 421 ~~~~~~a~~ 429 (460)
++.+++..+
T Consensus 368 ~~~~~~m~~ 376 (396)
T 3dzc_A 368 PQAYQAMSQ 376 (396)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 876654443
No 34
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.43 E-value=2.2e-12 Score=124.35 Aligned_cols=87 Identities=10% Similarity=0.127 Sum_probs=66.2
Q ss_pred CCCcEEeeccCch---hhcCCCcccceee----ccC-hhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecC
Q 012594 329 SDRGKLVEWAPQE---KVLGHPSVACFLS----HCG-WNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPD 400 (460)
Q Consensus 329 ~~~v~~~~~~p~~---~ll~~~~~~~~I~----hgG-~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~ 400 (460)
.++|.+.+++++. .++..+++ +|. +.| ..++.||+++|+|+|+.+. ......+.+. +.|..++
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~-- 332 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVP-- 332 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECC--
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeC--
Confidence 5789999999975 58877776 653 334 4589999999999999854 5566777663 7888884
Q ss_pred CCCccCHHHHHHHHHHHhcChHHHHHH
Q 012594 401 ENGIITRQEIQRQVKALLNDGGIKANA 427 (460)
Q Consensus 401 ~~~~~~~~~l~~~i~~~l~~~~~~~~a 427 (460)
.-+.++++++|.++++|++.+++.
T Consensus 333 ---~~d~~~l~~~i~~l~~~~~~~~~~ 356 (406)
T 2gek_A 333 ---VDDADGMAAALIGILEDDQLRAGY 356 (406)
T ss_dssp ---TTCHHHHHHHHHHHHHCHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHcCHHHHHHH
Confidence 347899999999999988654443
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.37 E-value=5.3e-12 Score=118.79 Aligned_cols=155 Identities=13% Similarity=0.064 Sum_probs=97.5
Q ss_pred EEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCch---hhcCCCcccc
Q 012594 275 IYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQE---KVLGHPSVAC 351 (460)
Q Consensus 275 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~ll~~~~~~~ 351 (460)
+++..|+.. ..+.+..++++++.++.+++++..+. ....+ ..+.++..++|.+.+|+++. .++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~----~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv-- 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW----EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA-- 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC----CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc----cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--
Confidence 445567653 44556777788877777766553322 00011 12222334899999999986 57877776
Q ss_pred ee--e------------ccChhhhhHhhhcCCceeeccccchhhhhHHHHHh--hhcceeEeecCCCCccCHHHHHHHHH
Q 012594 352 FL--S------------HCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFD--AWKIGLRFFPDENGIITRQEIQRQVK 415 (460)
Q Consensus 352 ~I--~------------hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~--~lg~g~~~~~~~~~~~~~~~l~~~i~ 415 (460)
+| + -|...++.||+++|+|+|+... ......+.+ . +.|..+ .. +.++++++|.
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~~i~ 303 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGT-----DF-APDEARRTLA 303 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSS-----CC-CHHHHHHHHH
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEc-----CC-CHHHHHHHHH
Confidence 65 2 2335689999999999999854 456666655 4 577777 44 8999999999
Q ss_pred HHhcChHHHHHHHHHH-HHHHHHhhcCCChHHHHHHHHHHHHhc
Q 012594 416 ALLNDGGIKANALKMK-QMARKSLVEGGSSFRNFESFVSQLKAI 458 (460)
Q Consensus 416 ~~l~~~~~~~~a~~l~-~~~~~~~~~~g~~~~~~~~~~~~l~~~ 458 (460)
++++ .+++++.. +.+.- ....+.+.++++++.+.
T Consensus 304 ~l~~----~~~~~~~~~~~~s~-----~~~~~~~~~~~~~~~~~ 338 (342)
T 2iuy_A 304 GLPA----SDEVRRAAVRLWGH-----VTIAERYVEQYRRLLAG 338 (342)
T ss_dssp TSCC----HHHHHHHHHHHHBH-----HHHHHHHHHHHHHHHTT
T ss_pred HHHH----HHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHcc
Confidence 9996 44554443 33321 23334555566555543
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.36 E-value=7.9e-10 Score=106.02 Aligned_cols=320 Identities=12% Similarity=0.080 Sum_probs=165.1
Q ss_pred CEEEEEcCC-CccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHH
Q 012594 5 PHVLVIPFP-AQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKV 83 (460)
Q Consensus 5 ~~Il~~~~~-~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 83 (460)
+++....+| ..|.-.-...|++.|+++||+|++++......... ...++.+..++....... ... ...
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~-~~~-~~~- 84 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK--------VYPNIYFHEVTVNQYSVF-QYP-PYD- 84 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C--------CCTTEEEECCCCC----C-CSC-CHH-
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc--------cCCceEEEeccccccccc-ccc-ccc-
Confidence 367766666 45677788899999999999999999854322111 123677766553211100 000 000
Q ss_pred HHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHh---CCceEEEcccchHHHHHHHhhhhHhhhc
Q 012594 84 RQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQM---GIARAAVIPYAPASLALVLHAPKLVEAG 158 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~l---giP~v~~~~~~~~~~~~~~~~~~~~~~~ 158 (460)
+. ....+.++++. .+||+|++..... ....++..+ ++|+|.........
T Consensus 85 ~~-----~~~~l~~~l~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-------------- 138 (394)
T 2jjm_A 85 LA-----LASKMAEVAQR-------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT-------------- 138 (394)
T ss_dssp HH-----HHHHHHHHHHH-------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH--------------
T ss_pred HH-----HHHHHHHHHHH-------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc--------------
Confidence 00 01223344444 7899999875333 233344443 59998765543210
Q ss_pred CCCCCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCcccccc--CCCe
Q 012594 159 LLDSNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPACDL--IPNI 236 (460)
Q Consensus 159 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~~~~--~p~~ 236 (460)
... .. . .. ..+... .+..+|.+++.+....+.-.... ..++
T Consensus 139 ---------------~~~-~~---------~-----~~-~~~~~~------~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ 181 (394)
T 2jjm_A 139 ---------------VLG-SD---------P-----SL-NNLIRF------GIEQSDVVTAVSHSLINETHELVKPNKDI 181 (394)
T ss_dssp ---------------TTT-TC---------T-----TT-HHHHHH------HHHHSSEEEESCHHHHHHHHHHTCCSSCE
T ss_pred ---------------ccC-CC---------H-----HH-HHHHHH------HHhhCCEEEECCHHHHHHHHHhhCCcccE
Confidence 000 00 0 00 001111 23567888887766543221111 2345
Q ss_pred eeeCccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhC----CCCEEEEEcCCC
Q 012594 237 LTIGPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESL----QQPFLWVVRPDF 312 (460)
Q Consensus 237 ~~vGp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~~ 312 (460)
..++......... .....++.+-+... ++..+++..|+.. ..+.+..++++++.+ +.+++ +++.+.
T Consensus 182 ~vi~ngv~~~~~~------~~~~~~~~~~~~~~-~~~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~-i~G~g~ 251 (394)
T 2jjm_A 182 QTVYNFIDERVYF------KRDMTQLKKEYGIS-ESEKILIHISNFR--KVKRVQDVVQAFAKIVTEVDAKLL-LVGDGP 251 (394)
T ss_dssp EECCCCCCTTTCC------CCCCHHHHHHTTCC----CEEEEECCCC--GGGTHHHHHHHHHHHHHSSCCEEE-EECCCT
T ss_pred EEecCCccHHhcC------CcchHHHHHHcCCC-CCCeEEEEeeccc--cccCHHHHHHHHHHHHhhCCCEEE-EECCch
Confidence 5554332221111 00111122222211 2235666678753 233344455554332 34443 344321
Q ss_pred CccccCCCchhHHhh-----hCCCcEEeeccCc-hhhcCCCccccee----eccChhhhhHhhhcCCceeeccccchhhh
Q 012594 313 MNKSHAKLPDGFVER-----VSDRGKLVEWAPQ-EKVLGHPSVACFL----SHCGWNSTLEGLSMGVPFLCWPYFADQYQ 382 (460)
Q Consensus 313 ~~~~~~~~~~~~~~~-----~~~~v~~~~~~p~-~~ll~~~~~~~~I----~hgG~~sv~eal~~GvP~i~~P~~~dQ~~ 382 (460)
..+.+.+. ..++|.+.++... ..+|..+++ +| .-|..+++.||+++|+|+|+.+.. .
T Consensus 252 -------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~ 318 (394)
T 2jjm_A 252 -------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----G 318 (394)
T ss_dssp -------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----T
T ss_pred -------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----C
Confidence 11222111 1357888887544 358877666 77 556678999999999999998653 3
Q ss_pred hHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHH
Q 012594 383 NRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANA 427 (460)
Q Consensus 383 ~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a 427 (460)
....+.+. +.|..++ .-+.++++++|.++++|++.+++.
T Consensus 319 ~~e~v~~~-~~g~~~~-----~~d~~~la~~i~~l~~~~~~~~~~ 357 (394)
T 2jjm_A 319 IPEVIQHG-DTGYLCE-----VGDTTGVADQAIQLLKDEELHRNM 357 (394)
T ss_dssp STTTCCBT-TTEEEEC-----TTCHHHHHHHHHHHHHCHHHHHHH
T ss_pred hHHHhhcC-CceEEeC-----CCCHHHHHHHHHHHHcCHHHHHHH
Confidence 33444543 6788884 347899999999999988654433
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.31 E-value=6.1e-10 Score=105.86 Aligned_cols=164 Identities=15% Similarity=0.208 Sum_probs=100.6
Q ss_pred CcEEEEEcCCCcCCCHHHHHHHHHHHHhCCC----CE-EEEEcCCCCccccCCCchhHHhh--hCCCcEEeeccCc-hhh
Q 012594 272 GSVIYVAFGSVAVLSQEQLEELALGLESLQQ----PF-LWVVRPDFMNKSHAKLPDGFVER--VSDRGKLVEWAPQ-EKV 343 (460)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~----~~-i~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~-~~l 343 (460)
++.+++..|+.. ..+.+..++++++.+.. .+ ++.++.+ ....+ ..+.++ ..+++.+.++... ..+
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQD----KPRKF-EALAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSS----CCHHH-HHHHHHHTCGGGEEEESCCSCHHHH
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCC----CHHHH-HHHHHHcCCCCcEEECCCcccHHHH
Confidence 346777788753 33456667777766532 22 3444433 11111 111111 2468899988554 358
Q ss_pred cCCCcccceee----ccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhc
Q 012594 344 LGHPSVACFLS----HCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLN 419 (460)
Q Consensus 344 l~~~~~~~~I~----hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~ 419 (460)
+..+++ +|. -|..+++.||+++|+|+|+.+. ..+...+.+. +.|..+. ..-+.++++++|.++++
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~----~~~~~~~l~~~i~~l~~ 336 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIA----EPFSQEQLNEVLRKALT 336 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEEC----SSCCHHHHHHHHHHHHH
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeC----CCCCHHHHHHHHHHHHc
Confidence 877666 665 5677899999999999999854 4556677774 8899884 23579999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 012594 420 DGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQ 454 (460)
Q Consensus 420 ~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 454 (460)
|++.+++..+-+.+..... .-....+.+.++++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 337 QSPLRMAWAENARHYADTQ-DLYSLPEKAADIITG 370 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHS-CCSCHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 8865554444444333310 013444455555543
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.24 E-value=4e-10 Score=108.96 Aligned_cols=111 Identities=14% Similarity=0.041 Sum_probs=73.4
Q ss_pred CCCcEEeeccC---c---hhhcCCCcccceeecc----ChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEee
Q 012594 329 SDRGKLVEWAP---Q---EKVLGHPSVACFLSHC----GWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFF 398 (460)
Q Consensus 329 ~~~v~~~~~~p---~---~~ll~~~~~~~~I~hg----G~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~ 398 (460)
.++|.+.+|++ + ..++..+++ +|.-. ...++.||+++|+|+|+.+. ..+...+.+. +.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEE-
Confidence 47899999876 2 247766666 66543 46789999999999999854 4566666663 678887
Q ss_pred cCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012594 399 PDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQLK 456 (460)
Q Consensus 399 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 456 (460)
. +.++++++|.++++|++.+++..+-+.+.. .+.-+....++.+.+-+.
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~---~~~fs~~~~~~~~~~~~~ 412 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSKEMGAKAKERV---RKNFIITKHMERYLDILN 412 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---HHHTBHHHHHHHHHHHHH
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH---HHHcCHHHHHHHHHHHHH
Confidence 3 789999999999998865544333322221 112344445555554443
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.18 E-value=1.5e-10 Score=109.87 Aligned_cols=318 Identities=14% Similarity=0.049 Sum_probs=165.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchh-HHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHA-KITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKV 83 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 83 (460)
.|++++. |+.-.+.-+.+|.++|.++ +++.++.|....+ .+.+... .++.+......+.. ...++...
T Consensus 10 ~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i~~~~~~l~~---~~~~~~~~ 78 (385)
T 4hwg_A 10 LKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGIRKPDYFLEV---AADNTAKS 78 (385)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCCCCCSEECCC---CCCCSHHH
T ss_pred hheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCCCCCceecCC---CCCCHHHH
Confidence 4676665 8888899999999999887 9988887765543 2222100 02222000001111 11122222
Q ss_pred HHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeC--CCcchHHHHHHHhCCceEEEcccchHHHHHHHhhhhHhhhcCCC
Q 012594 84 RQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIAD--LTVGWALEVAEQMGIARAAVIPYAPASLALVLHAPKLVEAGLLD 161 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D--~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
... ....+.++++. .+||+|++- ....++..+|.++|||++.+....-
T Consensus 79 ~~~----~~~~l~~~l~~-------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eaglr------------------- 128 (385)
T 4hwg_A 79 IGL----VIEKVDEVLEK-------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGNR------------------- 128 (385)
T ss_dssp HHH----HHHHHHHHHHH-------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCCC-------------------
T ss_pred HHH----HHHHHHHHHHh-------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCCc-------------------
Confidence 221 12235555666 899998863 2334557889999999775332110
Q ss_pred CCCCCCCCCcccccCCCCCCccccCCCCCCCCCcchhHHHHHHHHHHhhcccccEEEEccccccCccc-ccc-CCCeeee
Q 012594 162 SNGNAMTDEPILLSEGTLPWKKKEYGWCFPSQPHMQKLFFGACSAVAQNLKISNWILCNSFYELDPPA-CDL-IPNILTI 239 (460)
Q Consensus 162 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le~~~-~~~-~p~~~~v 239 (460)
.+.. ....+....... ..++.++..+...-+.-. ... ..+++.+
T Consensus 129 ---------------------------s~~~-~~pee~nR~~~~------~~a~~~~~~te~~~~~l~~~G~~~~~I~vt 174 (385)
T 4hwg_A 129 ---------------------------CFDQ-RVPEEINRKIID------HISDVNITLTEHARRYLIAEGLPAELTFKS 174 (385)
T ss_dssp ---------------------------CSCT-TSTHHHHHHHHH------HHCSEEEESSHHHHHHHHHTTCCGGGEEEC
T ss_pred ---------------------------cccc-cCcHHHHHHHHH------hhhceeecCCHHHHHHHHHcCCCcCcEEEE
Confidence 0000 000000011100 234555555544221110 011 2357778
Q ss_pred CccCCCCCccCccCCCCCCCCchhhhhccCCCCcEEEEEcCCCcCCC-HHHHHHHHHHHHhC----CCCEEEEEcCCCCc
Q 012594 240 GPLLGRDHLEHSAVNFWPEDSTCLGWLDKQAVGSVIYVAFGSVAVLS-QEQLEELALGLESL----QQPFLWVVRPDFMN 314 (460)
Q Consensus 240 Gp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i~~~~~~~~~ 314 (460)
|....+...... .. ....++.+.+.-.+ ++.++++.|...... .+.+..+++++..+ +..+++.....
T Consensus 175 Gnp~~D~~~~~~--~~-~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--- 247 (385)
T 4hwg_A 175 GSHMPEVLDRFM--PK-ILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--- 247 (385)
T ss_dssp CCSHHHHHHHHH--HH-HHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH---
T ss_pred CCchHHHHHHhh--hh-cchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH---
Confidence 843222110000 00 01122233333222 458899887653322 24566777776543 45666654311
Q ss_pred cccCCCchhHHhh-----hCCCcEEeeccCc---hhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHH
Q 012594 315 KSHAKLPDGFVER-----VSDRGKLVEWAPQ---EKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNY 386 (460)
Q Consensus 315 ~~~~~~~~~~~~~-----~~~~v~~~~~~p~---~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~ 386 (460)
..+.+.+. ..+|+++.+.+++ ..+++++++ +|+-.|. .+.||.++|+|+|+++...+-+. .
T Consensus 248 -----~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~ 316 (385)
T 4hwg_A 248 -----TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---G 316 (385)
T ss_dssp -----HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---H
T ss_pred -----HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---h
Confidence 10111110 1357888666554 468877666 9998876 46999999999999987654222 2
Q ss_pred HHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHH
Q 012594 387 IFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGI 423 (460)
Q Consensus 387 v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~ 423 (460)
.++ |.++.+. .+.+.|.+++.++++|+..
T Consensus 317 -v~~-G~~~lv~------~d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 317 -MDA-GTLIMSG------FKAERVLQAVKTITEEHDN 345 (385)
T ss_dssp -HHH-TCCEECC------SSHHHHHHHHHHHHTTCBT
T ss_pred -hhc-CceEEcC------CCHHHHHHHHHHHHhChHH
Confidence 343 8877763 2789999999999988753
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.15 E-value=3.4e-09 Score=109.08 Aligned_cols=163 Identities=11% Similarity=0.065 Sum_probs=91.3
Q ss_pred cEEEEEcCCCcCCCHHHHHHHHHHHHhCC-----CCEEEEEcCCCCccccC----CCchhHH---hh--hCCCcEEeecc
Q 012594 273 SVIYVAFGSVAVLSQEQLEELALGLESLQ-----QPFLWVVRPDFMNKSHA----KLPDGFV---ER--VSDRGKLVEWA 338 (460)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~~~~~~----~~~~~~~---~~--~~~~v~~~~~~ 338 (460)
..+++..|... ..+.+..+++|+..+. .+++++ +++....... ...+.+. ++ ..++|.+.++.
T Consensus 572 ~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIv-G~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 572 KPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVV-GGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp SCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEE-CCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEE-eCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 36777788754 3455666777765542 344444 4331000000 0001111 11 24678888854
Q ss_pred ----CchhhcC----CCcccceee----ccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccC
Q 012594 339 ----PQEKVLG----HPSVACFLS----HCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIIT 406 (460)
Q Consensus 339 ----p~~~ll~----~~~~~~~I~----hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~ 406 (460)
|..++.. .+++ +|. -|-..++.||+++|+|+|+. |-......+.+. +.|..++. -+
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p-----~D 716 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP-----YH 716 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT-----TS
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC-----CC
Confidence 4454443 3344 653 34457899999999999997 555566666663 68888843 47
Q ss_pred HHHHHHHHHHHh----cChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 012594 407 RQEIQRQVKALL----NDGGIKANALKMKQMARKSLVEGGSSFRNFESFVS 453 (460)
Q Consensus 407 ~~~l~~~i~~~l----~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 453 (460)
.+.++++|.+++ .|++.+++..+-+.+... +.-+-...++.+++
T Consensus 717 ~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~---~~fSwe~~a~~ll~ 764 (816)
T 3s28_A 717 GDQAADTLADFFTKCKEDPSHWDEISKGGLQRIE---EKYTWQIYSQRLLT 764 (816)
T ss_dssp HHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHH---HSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH---HhCCHHHHHHHHHH
Confidence 889999997766 787655444333333221 23444444444444
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.02 E-value=3e-08 Score=97.73 Aligned_cols=136 Identities=11% Similarity=0.090 Sum_probs=81.3
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHH---hCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcE-EeeccCch---hhcCC
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLE---SLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGK-LVEWAPQE---KVLGH 346 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~---~ll~~ 346 (460)
.+++..|+... .+.+..+++|+. +.+.+++++..+.. .....-..+.++.++++. +.++ +.. .++..
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~---~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~ 365 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGDV---ALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAG 365 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBCH---HHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCch---HHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhc
Confidence 47777888643 333444444443 33556655543220 000001112222346887 6788 443 47766
Q ss_pred Ccccceee----ccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhh---------cceeEeecCCCCccCHHHHHHH
Q 012594 347 PSVACFLS----HCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAW---------KIGLRFFPDENGIITRQEIQRQ 413 (460)
Q Consensus 347 ~~~~~~I~----hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~l---------g~g~~~~~~~~~~~~~~~l~~~ 413 (460)
+++ +|. -|...+++||+++|+|+|+... ......+.+ - +.|..++ .-+.++++++
T Consensus 366 adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~la~~ 433 (485)
T 1rzu_A 366 CDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFS-----PVTLDGLKQA 433 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEES-----SCSHHHHHHH
T ss_pred CCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeC-----CCCHHHHHHH
Confidence 666 662 3446789999999999999854 445555543 2 4788874 3478999999
Q ss_pred HHHHh---cChHHHHHH
Q 012594 414 VKALL---NDGGIKANA 427 (460)
Q Consensus 414 i~~~l---~~~~~~~~a 427 (460)
|.+++ +|++.+++.
T Consensus 434 i~~ll~~~~~~~~~~~~ 450 (485)
T 1rzu_A 434 IRRTVRYYHDPKLWTQM 450 (485)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHH
Confidence 99999 677654433
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.92 E-value=1.3e-07 Score=93.17 Aligned_cols=159 Identities=13% Similarity=0.023 Sum_probs=89.8
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHHh---CCCCEEEEEcCCCCccccCCCchhHHhhhCCCcE-EeeccCch--hhcCCC
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLES---LQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGK-LVEWAPQE--KVLGHP 347 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~--~ll~~~ 347 (460)
.+++..|+.. ..+.+..+++|+.. .+.+++++..+.. .....-..+..+..+++. +.++.... .++..+
T Consensus 293 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~---~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~a 367 (485)
T 2qzs_A 293 PLFAVVSRLT--SQKGLDLVLEALPGLLEQGGQLALLGAGDP---VLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGA 367 (485)
T ss_dssp CEEEEEEEES--GGGCHHHHHHHHHHHHHTTCEEEEEEEECH---HHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHC
T ss_pred eEEEEeccCc--cccCHHHHHHHHHHHhhCCcEEEEEeCCch---HHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhC
Confidence 5666677653 23334445555543 3556655543220 000000112222346786 77883332 477776
Q ss_pred cccceee----ccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhh---------cceeEeecCCCCccCHHHHHHHH
Q 012594 348 SVACFLS----HCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAW---------KIGLRFFPDENGIITRQEIQRQV 414 (460)
Q Consensus 348 ~~~~~I~----hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~l---------g~g~~~~~~~~~~~~~~~l~~~i 414 (460)
++ +|. -|...+++||+++|+|+|+... ......+.+ - +.|..++ .-+.++++++|
T Consensus 368 dv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~la~~i 435 (485)
T 2qzs_A 368 DV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFE-----DSNAWSLLRAI 435 (485)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEEC-----SSSHHHHHHHH
T ss_pred CE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEEC-----CCCHHHHHHHH
Confidence 66 662 3445788999999999999844 445555553 2 4788884 34789999999
Q ss_pred HHHh---cChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012594 415 KALL---NDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQL 455 (460)
Q Consensus 415 ~~~l---~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 455 (460)
.+++ +|++.+++..+ ..++ +.-+-...++.+.+-+
T Consensus 436 ~~ll~~~~~~~~~~~~~~---~~~~---~~fs~~~~~~~~~~ly 473 (485)
T 2qzs_A 436 RRAFVLWSRPSLWRFVQR---QAMA---MDFSWQVAAKSYRELY 473 (485)
T ss_dssp HHHHHHHTSHHHHHHHHH---HHHH---CCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHH---HHHh---hcCCHHHHHHHHHHHH
Confidence 9999 67765544332 2222 2445444555554443
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.86 E-value=2.5e-07 Score=89.06 Aligned_cols=162 Identities=10% Similarity=0.055 Sum_probs=91.6
Q ss_pred cEEEEEcCCCcCCCHHHHHHHHHHHHh-----CCCCEEEEEcCCCCccccCCCchhHHh---h--hCCC-------cEEe
Q 012594 273 SVIYVAFGSVAVLSQEQLEELALGLES-----LQQPFLWVVRPDFMNKSHAKLPDGFVE---R--VSDR-------GKLV 335 (460)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~---~--~~~~-------v~~~ 335 (460)
..+++..|+.. ..+.+..+++|+.. .+.+++++..+.... ...+.+.+.+ + ..++ +.+.
T Consensus 184 ~~~il~vGr~~--~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~--~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~ 259 (413)
T 3oy2_A 184 DVLFLNMNRNT--ARKRLDIYVLAAARFISKYPDAKVRFLCNSHHES--KFDLHSIALRELVASGVDNVFTHLNKIMINR 259 (413)
T ss_dssp SEEEECCSCSS--GGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTC--SCCHHHHHHHHHHHHTCSCHHHHHTTEEEEC
T ss_pred ceEEEEcCCCc--hhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccc--hhhHHHHHHHHHHHcCcccccccccceeecc
Confidence 47788888853 23445555555543 245666655433110 0001122211 1 2333 5667
Q ss_pred eccCchh---hcCCCcccceee----ccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcc---------------
Q 012594 336 EWAPQEK---VLGHPSVACFLS----HCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKI--------------- 393 (460)
Q Consensus 336 ~~~p~~~---ll~~~~~~~~I~----hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~--------------- 393 (460)
+|+|+.+ ++..+++ +|. -|...++.||+++|+|+|+.. -......+.+ |.
T Consensus 260 g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~--~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSG--DCVYKIKPSAWISVDDR 331 (413)
T ss_dssp SCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCT--TTSEEECCCEEEECTTT
T ss_pred CcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHcc--Ccccccccccccccccc
Confidence 9999654 6766666 662 344568999999999999974 3445555544 33
Q ss_pred -ee--EeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012594 394 -GL--RFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMARKSLVEGGSSFRNFESFVSQL 455 (460)
Q Consensus 394 -g~--~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 455 (460)
|. .+.. -+.++++++| ++++|++.+++..+-+.+.. .+.-+....++.+.+-+
T Consensus 332 ~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~---~~~fs~~~~~~~~~~~~ 387 (413)
T 3oy2_A 332 DGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFV---KTKPTWDDISSDIIDFF 387 (413)
T ss_dssp CSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHH---TTSCCHHHHHHHHHHHH
T ss_pred cCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHH
Confidence 55 5532 3899999999 99998876544443333332 12334444444444433
No 44
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.84 E-value=4.1e-06 Score=84.14 Aligned_cols=91 Identities=14% Similarity=0.085 Sum_probs=64.7
Q ss_pred CCcEEeeccCch---hhcCCCccccee---eccChhhhhHhhhcCCceeeccccchhhhh-HHHHHhhhcceeEeecCCC
Q 012594 330 DRGKLVEWAPQE---KVLGHPSVACFL---SHCGWNSTLEGLSMGVPFLCWPYFADQYQN-RNYIFDAWKIGLRFFPDEN 402 (460)
Q Consensus 330 ~~v~~~~~~p~~---~ll~~~~~~~~I---~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~-a~~v~~~lg~g~~~~~~~~ 402 (460)
++|.+.+++|+. .++..+++ || ..|+..++.||+++|+|+|++|...-.... +..+.+ .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 679999999854 46777666 65 236678899999999999997654211112 344555 47777663
Q ss_pred CccCHHHHHHHHHHHhcChHHHHHHHH
Q 012594 403 GIITRQEIQRQVKALLNDGGIKANALK 429 (460)
Q Consensus 403 ~~~~~~~l~~~i~~~l~~~~~~~~a~~ 429 (460)
. +.+.++++|.++++|++.+++..+
T Consensus 507 ~--~~~~la~~i~~l~~~~~~~~~~~~ 531 (568)
T 2vsy_A 507 A--DDAAFVAKAVALASDPAALTALHA 531 (568)
T ss_dssp S--SHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhcCHHHHHHHHH
Confidence 2 789999999999999876554433
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.76 E-value=1e-06 Score=84.47 Aligned_cols=76 Identities=9% Similarity=0.046 Sum_probs=58.0
Q ss_pred CCCcEEeeccCchh---hcCCCcccceee----ccChhhhhHhh-------hcCCceeeccccchhhhhHHHHHhhhcce
Q 012594 329 SDRGKLVEWAPQEK---VLGHPSVACFLS----HCGWNSTLEGL-------SMGVPFLCWPYFADQYQNRNYIFDAWKIG 394 (460)
Q Consensus 329 ~~~v~~~~~~p~~~---ll~~~~~~~~I~----hgG~~sv~eal-------~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g 394 (460)
.+||.+.+++|+.+ ++..+++ +|. -|-.+++.||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 57899999998754 6777776 553 23346789999 99999999855 5553 568
Q ss_pred eE-eecCCCCccCHHHHHHHHHHHhcChH
Q 012594 395 LR-FFPDENGIITRQEIQRQVKALLNDGG 422 (460)
Q Consensus 395 ~~-~~~~~~~~~~~~~l~~~i~~~l~~~~ 422 (460)
.. +.. -+.++++++|.++++|++
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 77 643 478999999999998875
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.65 E-value=8.5e-08 Score=80.60 Aligned_cols=140 Identities=11% Similarity=0.108 Sum_probs=92.3
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCccccCCCchhHH---hhhCCCcEEeeccCch---hhcCC
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLESL-QQPFLWVVRPDFMNKSHAKLPDGFV---ERVSDRGKLVEWAPQE---KVLGH 346 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~p~~---~ll~~ 346 (460)
.+++..|+.. ..+.+..++++++.+ +.+++++..+. ....+..... ...++|+.+.+|+++. .++..
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 4555667753 345577788888776 45555543322 1111111111 1235799999999983 57877
Q ss_pred Ccccceee---c-cChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChH
Q 012594 347 PSVACFLS---H-CGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGG 422 (460)
Q Consensus 347 ~~~~~~I~---h-gG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 422 (460)
+++ +|. + |...++.||+++|+|+|+.. ...+...+.+. +.|..+ . -+.++++++|.++++|++
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCTT
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCHH
Confidence 666 665 2 34458999999999999984 45566666653 678777 3 268999999999998886
Q ss_pred H-HHHHHHHHH
Q 012594 423 I-KANALKMKQ 432 (460)
Q Consensus 423 ~-~~~a~~l~~ 432 (460)
. ++++++.++
T Consensus 165 ~~~~~~~~~a~ 175 (177)
T 2f9f_A 165 KFKKDCFRRAK 175 (177)
T ss_dssp TTHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 4 666665554
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.56 E-value=6.4e-06 Score=77.95 Aligned_cols=92 Identities=15% Similarity=0.243 Sum_probs=63.4
Q ss_pred CcEEeeccCc-hhhcCCCcccceee-----ccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCc
Q 012594 331 RGKLVEWAPQ-EKVLGHPSVACFLS-----HCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGI 404 (460)
Q Consensus 331 ~v~~~~~~p~-~~ll~~~~~~~~I~-----hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~ 404 (460)
++.+.++... ..+++.+++ ++. -+|..+++||+++|+|+|+-|...+.......+.+. |.++.. +
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~-----~- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV-----K- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-----C-
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-----C-
Confidence 4566665443 357866665 543 134578999999999999877777766666665553 776665 2
Q ss_pred cCHHHHHHHHHHHhcChH----HHHHHHHHHHH
Q 012594 405 ITRQEIQRQVKALLNDGG----IKANALKMKQM 433 (460)
Q Consensus 405 ~~~~~l~~~i~~~l~~~~----~~~~a~~l~~~ 433 (460)
+.++|+++|.++++| + +.+++++..+.
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 689999999999988 5 55555555444
No 48
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.96 E-value=0.00013 Score=62.13 Aligned_cols=84 Identities=14% Similarity=0.074 Sum_probs=62.9
Q ss_pred CcEE-eeccCch---hhcCCCcccceeec----cChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCC
Q 012594 331 RGKL-VEWAPQE---KVLGHPSVACFLSH----CGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDEN 402 (460)
Q Consensus 331 ~v~~-~~~~p~~---~ll~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~ 402 (460)
++.+ .+++++. .++..+++ +|.- |...++.||+++|+|+|+... ......+ .. +.|..++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEec----
Confidence 8999 9999864 47877666 6642 335788999999999998844 4555566 53 7888884
Q ss_pred CccCHHHHHHHHHHHhc-ChHHHHHH
Q 012594 403 GIITRQEIQRQVKALLN-DGGIKANA 427 (460)
Q Consensus 403 ~~~~~~~l~~~i~~~l~-~~~~~~~a 427 (460)
.-+.+.++++|.++++ |++.+++.
T Consensus 164 -~~~~~~l~~~i~~l~~~~~~~~~~~ 188 (200)
T 2bfw_A 164 -AGDPGELANAILKALELSRSDLSKF 188 (200)
T ss_dssp -TTCHHHHHHHHHHHHHCCHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHhcCHHHHHHH
Confidence 3478999999999999 88654433
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.96 E-value=4.3e-05 Score=62.92 Aligned_cols=135 Identities=10% Similarity=0.211 Sum_probs=79.4
Q ss_pred cEEEEEcCCCcCCCHHHHHHHHHHHHhCCC--CE-EEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchh---hcCC
Q 012594 273 SVIYVAFGSVAVLSQEQLEELALGLESLQQ--PF-LWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEK---VLGH 346 (460)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~--~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~---ll~~ 346 (460)
+++++..|+.. ..+.+..+++++..+.. .+ ++.++.+. ....+ ....++..-++.+ +|+|+.+ ++..
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~---~~~~~-~~~~~~~~~~v~~-g~~~~~~~~~~~~~ 74 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGP---DEKKI-KLLAQKLGVKAEF-GFVNSNELLEILKT 74 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCST---THHHH-HHHHHHHTCEEEC-CCCCHHHHHHHHTT
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCc---cHHHH-HHHHHHcCCeEEE-eecCHHHHHHHHHh
Confidence 47788888864 34556777777776532 33 23333220 00001 1122223347778 9998754 7877
Q ss_pred Ccccceee----ccChhhhhHhhhcCC-ceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcCh
Q 012594 347 PSVACFLS----HCGWNSTLEGLSMGV-PFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 347 ~~~~~~I~----hgG~~sv~eal~~Gv-P~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 421 (460)
+++ +|. -|...++.||+++|+ |+|+..... .....+.+. +. .+ ..-+.++++++|.++++|+
T Consensus 75 adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~-----~~~~~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 75 CTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LF-----EPNNAKDLSAKIDWWLENK 141 (166)
T ss_dssp CSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EE-----CTTCHHHHHHHHHHHHHCH
T ss_pred CCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EE-----cCCCHHHHHHHHHHHHhCH
Confidence 666 664 344579999999996 999943221 111222221 32 33 2347999999999999988
Q ss_pred HHHHHH
Q 012594 422 GIKANA 427 (460)
Q Consensus 422 ~~~~~a 427 (460)
+.+++.
T Consensus 142 ~~~~~~ 147 (166)
T 3qhp_A 142 LERERM 147 (166)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 644433
No 50
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.91 E-value=0.00015 Score=74.54 Aligned_cols=178 Identities=16% Similarity=0.127 Sum_probs=109.5
Q ss_pred CCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHh--hhCCCcEEeeccCchhhcC-CC
Q 012594 271 VGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVE--RVSDRGKLVEWAPQEKVLG-HP 347 (460)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~ll~-~~ 347 (460)
++.++|.+|.+..+.+++.+..-++.|++.+-..+|......... ..+...+.. ..++++.+.+.+|..+.|. +.
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~--~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~ 598 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--PNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQ 598 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGH--HHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHH--HHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhC
Confidence 345999999999999999999999999999888888876542110 011111111 1246788889888766432 33
Q ss_pred cccceee---ccChhhhhHhhhcCCceeeccccc-hhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHH
Q 012594 348 SVACFLS---HCGWNSTLEGLSMGVPFLCWPYFA-DQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGI 423 (460)
Q Consensus 348 ~~~~~I~---hgG~~sv~eal~~GvP~i~~P~~~-dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~ 423 (460)
.+++++- .+|.+|+.|||++|||+|+++-.. =...-+-.+.. +|+...+-. |.++-.+..-++-+|.+.
T Consensus 599 ~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~------~~~~Y~~~a~~la~d~~~ 671 (723)
T 4gyw_A 599 LADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK------NRQEYEDIAVKLGTDLEY 671 (723)
T ss_dssp GCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS------SHHHHHHHHHHHHHCHHH
T ss_pred CCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC------CHHHHHHHHHHHhcCHHH
Confidence 3444654 889999999999999999998542 22233344444 687776632 555555555567777765
Q ss_pred HHHHH-HHHHHHHHH-hhcCCChHHHHHHHHHHHHh
Q 012594 424 KANAL-KMKQMARKS-LVEGGSSFRNFESFVSQLKA 457 (460)
Q Consensus 424 ~~~a~-~l~~~~~~~-~~~~g~~~~~~~~~~~~l~~ 457 (460)
++.++ +|.+.+.++ +-....-.++++...+.+++
T Consensus 672 l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~ 707 (723)
T 4gyw_A 672 LKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWE 707 (723)
T ss_dssp HHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHH
Confidence 44443 333333321 00111223456666666554
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.91 E-value=0.00033 Score=65.37 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=75.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCccchhHHhhccCccccCCCCeE-EEEcCCCCCCCCcCcccH
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEHMHAKITASMPQKAEQSSLIT-MVSIPDGLESHEADRRDL 80 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~ 80 (460)
.+||+++-..+.|++.-+.++.+.|+++ +.+|++++.+.+.+.++.. +.++ ++.++.. . .
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~-------~--~ 70 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK-------G--R 70 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS-------S--H
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc-------c--c
Confidence 4599999999999999999999999987 9999999999998887655 4664 5555421 0 0
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhcCCCCCc-cEEEeCCCcchHHHHHHHhCCceEE
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNKSNDCEKI-SCVIADLTVGWALEVAEQMGIARAA 136 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~-D~vv~D~~~~~~~~~A~~lgiP~v~ 136 (460)
. ..+ ..+.++++.++. .++ |++|.-....-...++...|+|...
T Consensus 71 ~---~~~-----~~~~~l~~~Lr~----~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 71 H---NSI-----SGLNEVAREINA----KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp H---HHH-----HHHHHHHHHHHH----HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred c---ccH-----HHHHHHHHHHhh----CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 001 113345566666 789 9999655555666788889999764
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.83 E-value=0.00017 Score=71.02 Aligned_cols=146 Identities=10% Similarity=0.030 Sum_probs=93.8
Q ss_pred CcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEE--cCCCCccccCCCchhHHh-hhCCCcEEeeccCchhh---cC
Q 012594 272 GSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVV--RPDFMNKSHAKLPDGFVE-RVSDRGKLVEWAPQEKV---LG 345 (460)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~l---l~ 345 (460)
+.++|.++++..+..++.++...+.+++.+..++|.. +... +....+-..+.+ ...+++.+.+.+|..+. +.
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~ 517 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILH 517 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHh
Confidence 3589999999888899999999988888877777643 3210 000011111111 13467888899987653 35
Q ss_pred CCccccee---eccChhhhhHhhhcCCceeeccccchh-hhhHHHHHhhhcceeE-eecCCCCccCHHHHHHHHHHHhcC
Q 012594 346 HPSVACFL---SHCGWNSTLEGLSMGVPFLCWPYFADQ-YQNRNYIFDAWKIGLR-FFPDENGIITRQEIQRQVKALLND 420 (460)
Q Consensus 346 ~~~~~~~I---~hgG~~sv~eal~~GvP~i~~P~~~dQ-~~~a~~v~~~lg~g~~-~~~~~~~~~~~~~l~~~i~~~l~~ 420 (460)
..++ ++ ..+|.+|+.|||++|||+|+.+-..=- ..-+..+.. .|+... +. -+.++..+..-++.+|
T Consensus 518 ~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 518 NCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVRLAEN 588 (631)
T ss_dssp TCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHHHHHC
T ss_pred cCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHHHhCC
Confidence 5555 43 347889999999999999998754211 111222333 466653 42 2678888888899999
Q ss_pred hHHHHHHH
Q 012594 421 GGIKANAL 428 (460)
Q Consensus 421 ~~~~~~a~ 428 (460)
++.+++.+
T Consensus 589 ~~~l~~LR 596 (631)
T 3q3e_A 589 HQERLELR 596 (631)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87655543
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.76 E-value=0.00057 Score=63.76 Aligned_cols=102 Identities=13% Similarity=0.059 Sum_probs=71.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCccchhHHhhccCccccCCCCe-EEEEcCCCCCCCCcCcccHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEHMHAKITASMPQKAEQSSLI-TMVSIPDGLESHEADRRDLH 81 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 81 (460)
+||+++.....|++.-..++.+.|+++ +.+|++++.+.+.+.++.. +.+ +++.++.. . ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~----~-~~~--- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG----H-GAL--- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC----c-ccc---
Confidence 489999988999999999999999987 9999999999888876554 355 45544311 0 000
Q ss_pred HHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceE
Q 012594 82 KVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARA 135 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v 135 (460)
......++.+.++. .+||++|.-....-+..++...|+|..
T Consensus 65 ---------~~~~~~~l~~~l~~----~~~D~vid~~~~~~sa~~~~~~~~~~~ 105 (348)
T 1psw_A 65 ---------EIGERRKLGHSLRE----KRYDRAYVLPNSFKSALVPLFAGIPHR 105 (348)
T ss_dssp ---------CHHHHHHHHHHTTT----TTCSEEEECSCCSGGGHHHHHTTCSEE
T ss_pred ---------chHHHHHHHHHHHh----cCCCEEEECCCChHHHHHHHHhCCCEE
Confidence 11224456667776 889999933333456677888899974
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.62 E-value=8.1e-05 Score=68.96 Aligned_cols=109 Identities=17% Similarity=0.173 Sum_probs=80.6
Q ss_pred CcEEeeccCchhh---cCCCcccceeeccC---------hhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEee
Q 012594 331 RGKLVEWAPQEKV---LGHPSVACFLSHCG---------WNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFF 398 (460)
Q Consensus 331 ~v~~~~~~p~~~l---l~~~~~~~~I~hgG---------~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~ 398 (460)
||.+.+|+|+.++ |+.++..++..-+. .+-+.|++++|+|+|+. +...++..+++. |+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EGIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TTCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cChhHHHHHHhC-CeEEEeC
Confidence 8999999999874 44445544543332 24578999999999986 456778888885 9999983
Q ss_pred cCCCCccCHHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHH
Q 012594 399 PDENGIITRQEIQRQVKALLNDG--GIKANALKMKQMARKSLVEGGSSFRNFESFVSQL 455 (460)
Q Consensus 399 ~~~~~~~~~~~l~~~i~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l 455 (460)
+.+++.++|..+..++ ++++|+++.+++++. |.-.++++.+.+.+|
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 3678888888865433 588899999888886 667777777666554
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.52 E-value=0.0082 Score=55.25 Aligned_cols=46 Identities=20% Similarity=0.199 Sum_probs=41.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCccchhHHhhc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~~~~~ 50 (460)
+||+++-..+.|++.-..++.+.|+++ +.+|++++.+.+.+.++..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 489999999999999999999999987 8999999999988877655
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.10 E-value=0.00032 Score=67.11 Aligned_cols=85 Identities=12% Similarity=-0.011 Sum_probs=57.8
Q ss_pred CCCcEEeeccCchh---hcCCCcccceee--c--cChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCC
Q 012594 329 SDRGKLVEWAPQEK---VLGHPSVACFLS--H--CGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDE 401 (460)
Q Consensus 329 ~~~v~~~~~~p~~~---ll~~~~~~~~I~--h--gG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~ 401 (460)
..+|.+.+++|+.+ ++..+++ ||. . |=..+++||+++|+|+|+- ..+ ....+.+. ..|+.++
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~-~~G~lv~--- 362 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWH-SNIVSLE--- 362 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTB-TTEEEES---
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcC-CCEEEeC---
Confidence 35788999998765 7767666 653 2 3345779999999999983 221 12334442 4688774
Q ss_pred CCccCHHHHHHHHHHHhcChHHHHH
Q 012594 402 NGIITRQEIQRQVKALLNDGGIKAN 426 (460)
Q Consensus 402 ~~~~~~~~l~~~i~~~l~~~~~~~~ 426 (460)
.-+.++++++|.++++|++.+++
T Consensus 363 --~~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 363 --QLNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp --SCSHHHHHHHHHHHHHHTC----
T ss_pred --CCCHHHHHHHHHHHHcCHHHHHH
Confidence 34789999999999998876655
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=96.14 E-value=0.032 Score=55.14 Aligned_cols=134 Identities=12% Similarity=0.111 Sum_probs=77.4
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHHh---CCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCch---hhcCCC
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLES---LQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQE---KVLGHP 347 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~ll~~~ 347 (460)
++++..|... ..+.+..+++|+.+ .+.++++...+... ....-.......+.++.+....+.. .+++.+
T Consensus 328 p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 328 PLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKKK---FEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp CEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCHH---HHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred cEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCch---HHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 5666677753 34445556666543 35566555433210 0001111222346788888777664 367666
Q ss_pred cccceeec----cChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCC-----CCccCHHHHHHHHHHHh
Q 012594 348 SVACFLSH----CGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDE-----NGIITRQEIQRQVKALL 418 (460)
Q Consensus 348 ~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~-----~~~~~~~~l~~~i~~~l 418 (460)
++ ||.= |-..+++||+++|+|+|+. |-......|.+. .-|..+.... -...+.+.|+++|+++|
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s----~~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral 475 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACA----STGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI 475 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEEC----SCTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEc----CCCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHH
Confidence 66 5532 3345889999999999997 445566666653 4555432210 02246789999999887
Q ss_pred c
Q 012594 419 N 419 (460)
Q Consensus 419 ~ 419 (460)
.
T Consensus 476 ~ 476 (536)
T 3vue_A 476 K 476 (536)
T ss_dssp H
T ss_pred H
Confidence 4
No 58
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=93.51 E-value=0.61 Score=38.75 Aligned_cols=98 Identities=9% Similarity=0.072 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc------hhHHhhccCccccCCCCeEEEEcCCCCCCCCcCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM------HAKITASMPQKAEQSSLITMVSIPDGLESHEADR 77 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 77 (460)
+..|++++..+.|-....+.+|...+.+|++|.|+..... .+.++.. +++++....++... .
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L---------~v~~~~~g~gf~~~---~ 95 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH---------GVEFQVMATGFTWE---T 95 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG---------TCEEEECCTTCCCC---G
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC---------CcEEEEcccccccC---C
Confidence 3478899999999999999999999999999999965442 2334333 58888777655422 1
Q ss_pred ccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc
Q 012594 78 RDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG 121 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~ 121 (460)
.+...- .......+....+.+.. .++|+||.|-...
T Consensus 96 ~~~~~~----~~~a~~~l~~a~~~l~~----~~yDlvILDEi~~ 131 (196)
T 1g5t_A 96 QNREAD----TAACMAVWQHGKRMLAD----PLLDMVVLDELTY 131 (196)
T ss_dssp GGHHHH----HHHHHHHHHHHHHHTTC----TTCSEEEEETHHH
T ss_pred CCcHHH----HHHHHHHHHHHHHHHhc----CCCCEEEEeCCCc
Confidence 111111 11123334445555544 8899999997544
No 59
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=93.05 E-value=0.35 Score=41.85 Aligned_cols=114 Identities=15% Similarity=0.183 Sum_probs=62.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVR 84 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 84 (460)
||||+..=-+. |.--+..|++.|.+.| +|+++.+...+..+.... .....+.+..+..+.. ......+....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----t~~~pl~~~~~~~~~~--~~v~GTPaDCV 73 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFY--TVIDGTPADCV 73 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEE--EETTCCHHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce----ecCCCeEEEEecCCCe--EEECCCHHHHH
Confidence 48887764333 3344778899999888 999999988776553321 1112345544432210 00111111111
Q ss_pred HHHHhhchHHHHHHHHHHhhcCCCCCccEEEe----------CCCcc---hHHHHHHHhCCceEEEccc
Q 012594 85 QSMLTVMPGCLRNLIEKVNKSNDCEKISCVIA----------DLTVG---WALEVAEQMGIARAAVIPY 140 (460)
Q Consensus 85 ~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~----------D~~~~---~~~~~A~~lgiP~v~~~~~ 140 (460)
..- +..++ .. .+||+||+ |.+++ .++.-|..+|||.|.+|..
T Consensus 74 ~la-------l~~l~---~~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 74 HLG-------YRVIL---EE----KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HHH-------HHTTT---TT----CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHH-------HHHhc---CC----CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 111 11112 12 57999996 33333 3445567889999998853
No 60
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=91.83 E-value=0.25 Score=41.65 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=42.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~ 50 (460)
|.++.||++...|+.|-+. ...|.+.|.++|++|.++.++.....+...
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 7777899999989988877 889999999999999999998887777544
No 61
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=91.76 E-value=1.1 Score=40.52 Aligned_cols=37 Identities=11% Similarity=0.121 Sum_probs=25.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|++++||+|+..+..+ ....+.|.++||+|..+.+.+
T Consensus 4 m~~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 4 MSQSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEECCC
T ss_pred cccCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEcCC
Confidence 7778999999876433 355677888999998777643
No 62
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=91.72 E-value=0.58 Score=40.71 Aligned_cols=111 Identities=15% Similarity=0.162 Sum_probs=60.7
Q ss_pred EEEEEcCCCccChHH-HHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHH
Q 012594 6 HVLVIPFPAQGHAGP-LMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVR 84 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p-~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 84 (460)
|||+..== |-..| +..|+++|.+.| +|+++.+...+..+.... +....+++..+....... ....+....
T Consensus 3 ~ILlTNDD--Gi~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si----T~~~pl~~~~~~~~~~~~--v~GTPaDCV 73 (251)
T 2wqk_A 3 TFLLVNDD--GYFSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTDFYTV--IDGTPADCV 73 (251)
T ss_dssp EEEEECSS--CTTCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETTEEEE--TTCCHHHHH
T ss_pred EEEEEcCC--CCCcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc----CCCCCceeEEeeccceee--cCCChHHHH
Confidence 78877633 33344 668899999888 599999887766543221 111234544433211000 111111111
Q ss_pred HHHHhhchHHHHHHHHHHhhcCCCCCccEEEe----------CCCcc---hHHHHHHHhCCceEEEcc
Q 012594 85 QSMLTVMPGCLRNLIEKVNKSNDCEKISCVIA----------DLTVG---WALEVAEQMGIARAAVIP 139 (460)
Q Consensus 85 ~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~----------D~~~~---~~~~~A~~lgiP~v~~~~ 139 (460)
.. .+...+.+ .+||+||+ |.+++ .|+.-|..+|||.|.+|.
T Consensus 74 ~l----------al~~~l~~----~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 74 HL----------GYRVILEE----KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HH----------HHHTTTTT----CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hh----------hhhhhcCC----CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 11 11111223 78999997 33333 455667788999999884
No 63
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=91.31 E-value=1.3 Score=36.83 Aligned_cols=44 Identities=20% Similarity=0.224 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccchH
Q 012594 93 GCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYAPA 143 (460)
Q Consensus 93 ~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 143 (460)
..++..++.+++ ..+|+||.|. .+..+|+++|+|.+.+.++...
T Consensus 129 ~e~~~~i~~l~~----~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKT----ENIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHH----TTCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHH----CCCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 456778888888 8899999984 4688999999999998875554
No 64
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=90.30 E-value=0.49 Score=41.06 Aligned_cols=42 Identities=17% Similarity=0.093 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHH
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKI 47 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~ 47 (460)
+||||+..=-+. |.--+..|++.|.+ +|+|+++.+...+...
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 478888774333 33446788888876 8999999998877655
No 65
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=89.95 E-value=3 Score=35.61 Aligned_cols=106 Identities=9% Similarity=-0.009 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCcc-c---hhHHhhccCccccCCCCeEEEEcCCCCCCCCcC
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEH-M---HAKITASMPQKAEQSSLITMVSIPDGLESHEAD 76 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 76 (460)
+++||+|+..|+.+ -+.++.+.|.+. +++|..+.+++ . .+..++. ++.+..++...- .
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~---------gIp~~~~~~~~~----~ 84 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA---------GVDALHMDPAAY----P 84 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT---------TCEEEECCGGGS----S
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc---------CCCEEEECcccc----c
Confidence 34699999776643 366777788766 68887665542 2 2334444 788876542110 0
Q ss_pred cccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 77 RRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
. + ..+.. ++++.+++ .+||+||+-.+.. -...+-+.+...++-++++.
T Consensus 85 ~-------r---~~~~~---~~~~~l~~----~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSL 133 (229)
T 3auf_A 85 S-------R---TAFDA---ALAERLQA----YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSL 133 (229)
T ss_dssp S-------H---HHHHH---HHHHHHHH----TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESSC
T ss_pred c-------h---hhccH---HHHHHHHh----cCCCEEEEcChhHhCCHHHHhhccCCEEEEccCc
Confidence 0 0 11112 33444444 8999999876543 45555677777788777664
No 66
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=89.78 E-value=2.2 Score=38.88 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=35.1
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 012594 5 PHVLVIPF-PAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHA 45 (460)
Q Consensus 5 ~~Il~~~~-~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~ 45 (460)
.+|+|++. |+-|-..-...||..|+++|++|.++..++...
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 46776665 799999999999999999999999999986544
No 67
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=89.53 E-value=2.2 Score=42.74 Aligned_cols=81 Identities=17% Similarity=0.100 Sum_probs=45.6
Q ss_pred CCcEE--e-eccCch---------hhcCCCcccceeec----cChhhhhHhhhcCCceeeccccchhhhhHHHHHhh---
Q 012594 330 DRGKL--V-EWAPQE---------KVLGHPSVACFLSH----CGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDA--- 390 (460)
Q Consensus 330 ~~v~~--~-~~~p~~---------~ll~~~~~~~~I~h----gG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~--- 390 (460)
++|++ . .|++.. .++..+++ ||.= |-..+.+||+++|+|+|+.-. ......|.+.
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~----gG~~d~V~dg~~~ 563 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV----SGFGSYMEDLIET 563 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT----BHHHHHHHTTSCH
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC----CChhhhhhccccc
Confidence 45543 2 777764 36766666 5532 334688999999999999844 3333333331
Q ss_pred ---hcceeEeecCCCCccCHHHHHHHHHHHh
Q 012594 391 ---WKIGLRFFPDENGIITRQEIQRQVKALL 418 (460)
Q Consensus 391 ---lg~g~~~~~~~~~~~~~~~l~~~i~~~l 418 (460)
-+.|+.+.. ....+.+++.++|.++|
T Consensus 564 ~~~~~tG~lV~~--rd~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 564 NQAKDYGIYIVD--RRFKAPDESVEQLVDYM 592 (725)
T ss_dssp HHHHHTTEEEEC--CSSSCHHHHHHHHHHHH
T ss_pred cCCCCceEEEeC--CCCCCHHHHHHHHHHHH
Confidence 135766632 12334444444444444
No 68
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=89.24 E-value=1.8 Score=41.71 Aligned_cols=108 Identities=12% Similarity=0.011 Sum_probs=71.9
Q ss_pred CcEEeeccCchh---hcCCCcccceee---ccChhh-hhHhhhcC---CceeeccccchhhhhHHHHHhhhcceeEeecC
Q 012594 331 RGKLVEWAPQEK---VLGHPSVACFLS---HCGWNS-TLEGLSMG---VPFLCWPYFADQYQNRNYIFDAWKIGLRFFPD 400 (460)
Q Consensus 331 ~v~~~~~~p~~~---ll~~~~~~~~I~---hgG~~s-v~eal~~G---vP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~ 400 (460)
.|++.+.+|+.+ ++..+++ |+. .=|+|. ..|++++| .|+|+--+. ..+..+. .-|+.++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a----Ga~~~l~---~~allVn-- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETC----GAAEVLG---EYCRSVN-- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB----TTHHHHG---GGSEEEC--
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCC----CCHHHhC---CCEEEEC--
Confidence 577788888754 6666666 443 357775 59999996 566554322 2233221 2478884
Q ss_pred CCCccCHHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHh
Q 012594 401 ENGIITRQEIQRQVKALLNDG--GIKANALKMKQMARKSLVEGGSSFRNFESFVSQLKA 457 (460)
Q Consensus 401 ~~~~~~~~~l~~~i~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~ 457 (460)
..+.+.++++|.++|+++ +-+++.+++.+.+.+ .+...=+++|++.|..
T Consensus 422 ---P~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 422 ---PFDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp ---TTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 358999999999999865 455556666666553 5667778888888764
No 69
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=88.68 E-value=5.3 Score=36.62 Aligned_cols=40 Identities=25% Similarity=0.294 Sum_probs=34.2
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 5 PHVLVIPF-PAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 5 ~~Il~~~~-~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
.+|+|++. |+-|-..-..+||..|+++|++|.++..+...
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~~ 66 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPAH 66 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTTC
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 35666654 79999999999999999999999999998744
No 70
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=88.63 E-value=2.5 Score=40.89 Aligned_cols=107 Identities=18% Similarity=0.088 Sum_probs=67.1
Q ss_pred cE-EeeccCchh---hcCCCcccceee---ccChh-hhhHhhhcCC-----ceeeccccchhhhhHHHHHhhhcceeEee
Q 012594 332 GK-LVEWAPQEK---VLGHPSVACFLS---HCGWN-STLEGLSMGV-----PFLCWPYFADQYQNRNYIFDAWKIGLRFF 398 (460)
Q Consensus 332 v~-~~~~~p~~~---ll~~~~~~~~I~---hgG~~-sv~eal~~Gv-----P~i~~P~~~dQ~~~a~~v~~~lg~g~~~~ 398 (460)
+. +.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+.-..+ .+.. +.-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~----l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANE----LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGT----CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHH----hCCeEEEC
Confidence 55 458888765 6766666 553 23554 7799999998 676654322 1111 12356664
Q ss_pred cCCCCccCHHHHHHHHHHHhcCh-H-HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhc
Q 012594 399 PDENGIITRQEIQRQVKALLNDG-G-IKANALKMKQMARKSLVEGGSSFRNFESFVSQLKAI 458 (460)
Q Consensus 399 ~~~~~~~~~~~l~~~i~~~l~~~-~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 458 (460)
..+.+.++++|.++|+++ + -+++.++..+.+++ -+...-++.+++.+.+.
T Consensus 403 -----p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 -----PYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp -----TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred -----CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 357899999999999854 3 33444444444433 36667777887777653
No 71
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=88.46 E-value=3 Score=35.33 Aligned_cols=103 Identities=8% Similarity=0.048 Sum_probs=59.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCC--EEEEEeCcc-c---hhHHhhccCccccCCCCeEEEEcCCC-CCCCCcCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGI--KVTFVSTEH-M---HAKITASMPQKAEQSSLITMVSIPDG-LESHEADR 77 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh--~V~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~ 77 (460)
+||+|+..|+.+ -+.++.+.|.+.+| +|..+.+++ . .+..++. |+.+..++.. +. .
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~~----~- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH---------NVECKVIQRKEFP----S- 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH---------TCCEEECCGGGSS----S-
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc---------CCCEEEeCccccc----c-
Confidence 389988766653 36677788888888 776555443 2 2334444 7777665421 11 0
Q ss_pred ccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 78 RDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
...+.+ ++++.+++ .+||+||+-.+.. -...+-+.....++-++++.
T Consensus 65 ----------r~~~~~---~~~~~l~~----~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 112 (216)
T 2ywr_A 65 ----------KKEFEE---RMALELKK----KGVELVVLAGFMRILSHNFLKYFPNKVINIHPSL 112 (216)
T ss_dssp ----------HHHHHH---HHHHHHHH----TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESSC
T ss_pred ----------hhhhhH---HHHHHHHh----cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCCc
Confidence 011112 23344444 8999999876533 44445555666778777664
No 72
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.43 E-value=0.25 Score=48.65 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=28.2
Q ss_pred CCEEEEEcC---C---CccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 4 EPHVLVIPF---P---AQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 4 ~~~Il~~~~---~---~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
+|||++++. | +.|=-.-.-+|.++|+++||+|+++++
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P 51 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISP 51 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEec
Confidence 689999973 2 233223466899999999999999985
No 73
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=88.06 E-value=2.5 Score=38.46 Aligned_cols=102 Identities=9% Similarity=0.002 Sum_probs=57.9
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc--------cchhHHhhccCccccCCCCeEEEEcCCCCCCCCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE--------HMHAKITASMPQKAEQSSLITMVSIPDGLESHEA 75 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 75 (460)
++||+|+. --+....+.+.|.++||+|..+.+. ...+...+. ++.+..... ....
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~---------gIpv~~~~~-~~~~-- 84 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD---------GVPVFKYSR-WRAK-- 84 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH---------TCCEEECSC-CEET--
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc---------CCCEEecCc-cccc--
Confidence 47999993 1233345678899999999877652 223333444 666655442 1000
Q ss_pred CcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccch
Q 012594 76 DRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYAP 142 (460)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 142 (460)
....+ ++++.+++ .+||++|+-.+.. -...+-+.....++-++++..
T Consensus 85 -------------~~~~~---~~~~~l~~----~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSLL 132 (329)
T 2bw0_A 85 -------------GQALP---DVVAKYQA----LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLL 132 (329)
T ss_dssp -------------TEECH---HHHHHHHT----TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCT
T ss_pred -------------ccccH---HHHHHHHh----cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCcC
Confidence 01111 23344444 8899999876533 334444555566888877764
No 74
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=88.02 E-value=2.9 Score=38.81 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=33.3
Q ss_pred EEEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 012594 6 HVLVIPF-PAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHA 45 (460)
Q Consensus 6 ~Il~~~~-~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~ 45 (460)
+|++++. |+-|-..-...||..|+++|++|.++.. +...
T Consensus 3 ~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~-~~~~ 42 (374)
T 3igf_A 3 LILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL-AEPV 42 (374)
T ss_dssp EEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SCSH
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CCCC
Confidence 7887765 6889999999999999999999999988 5444
No 75
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=87.90 E-value=3.4 Score=35.63 Aligned_cols=114 Identities=11% Similarity=0.110 Sum_probs=61.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCC-CCCcCcccHHHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLE-SHEADRRDLHKV 83 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~ 83 (460)
||||+..==+. |---+..|++.|++.| +|+++.+...+..+.... .....+++..+..+.. ........+..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~~~v~GTPaD- 73 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI----TIHVPLWMKKVFISERVVAYSTTGTPAD- 73 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC----CCSSCCCEEECCCSSSEEEEEESSCHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCCCCceEEECCcHHH-
Confidence 36666553222 2233778999998888 899999988766553322 1112345555533200 00001111111
Q ss_pred HHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeC----------CCcc---hHHHHHHHhCCceEEEcc
Q 012594 84 RQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIAD----------LTVG---WALEVAEQMGIARAAVIP 139 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D----------~~~~---~~~~~A~~lgiP~v~~~~ 139 (460)
+++--+..+.. .+||+||+- .+++ .++.-|..+|||.|.+|.
T Consensus 74 ----------CV~lal~~l~~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 74 ----------CVKLAYNVVMD----KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ----------HHHHHHHTTST----TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----------HHHHHHHhhcc----CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 12211222223 689999953 2333 445556788999999875
No 76
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=87.57 E-value=4.3 Score=34.93 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=62.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCC---C-CCCcCcccH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGL---E-SHEADRRDL 80 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~-~~~~~~~~~ 80 (460)
||||+..==+. |---+..|++.|++.| +|+++.+...+..+.... .....+++..++.+. . ........+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~~~~~~v~GTP 74 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI----TIAHPVRAYPHPSPLHAPHFPAYRVRGTP 74 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC----CCSSCBEEEECCCCTTSCCCCEEEEESCH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCcCCCCCceEEEcCcH
Confidence 36666653222 2233778999998888 899999987766543221 222346666664321 0 001011222
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeC----------CCcc---hHHHHHHHhCCceEEEccc
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIAD----------LTVG---WALEVAEQMGIARAAVIPY 140 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D----------~~~~---~~~~~A~~lgiP~v~~~~~ 140 (460)
......- +. + . .+||+||+- .+++ .++.-|..+|||.|.+|..
T Consensus 75 aDCV~la-----------l~-l-~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 130 (244)
T 2e6c_A 75 ADCVALG-----------LH-L-F----GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVP 130 (244)
T ss_dssp HHHHHHH-----------HH-H-S----CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHH-----------Hc-C-C----CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEecc
Confidence 2211111 11 2 3 789999953 2333 4455567889999998753
No 77
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=87.46 E-value=4.6 Score=34.00 Aligned_cols=104 Identities=4% Similarity=0.015 Sum_probs=61.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCcc-c---hhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEH-M---HAKITASMPQKAEQSSLITMVSIPDGLESHEADRR 78 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 78 (460)
+||+++.+|+.+ -+.++.+.|.+. +|+|..+.+++ . .+..++. ++.+..++.... .
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~---------gIp~~~~~~~~~----~-- 65 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE---------NVPAFVFSPKDY----P-- 65 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT---------TCCEEECCGGGS----S--
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc---------CCCEEEeCcccc----c--
Confidence 489888777644 355677788776 68998776553 2 2333444 777765542110 0
Q ss_pred cHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 79 DLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
+ + ..+.. ++++.+++ .+||+||.-.+.. -...+-+.+...++-++++.
T Consensus 66 ~-----~---~~~~~---~~~~~l~~----~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 114 (212)
T 3av3_A 66 S-----K---AAFES---EILRELKG----RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSL 114 (212)
T ss_dssp S-----H---HHHHH---HHHHHHHH----TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESSC
T ss_pred c-----h---hhhHH---HHHHHHHh----cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecCc
Confidence 0 0 11112 33444444 8999999876543 55556677777788777664
No 78
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=87.09 E-value=0.78 Score=37.37 Aligned_cols=43 Identities=9% Similarity=0.077 Sum_probs=35.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHh
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKIT 48 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~ 48 (460)
.||++...|+.|=+. ...+.+.|+++|++|.++.++.-.+++.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 389888888877665 8899999999999999999987666553
No 79
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=86.53 E-value=1.1 Score=40.67 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=32.9
Q ss_pred EEEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 6 HVLVIPF-PAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 6 ~Il~~~~-~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
+|+|++. |+-|-..-..+||..|+++|++|.++..+..
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 5665554 7999999999999999999999999998873
No 80
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=85.89 E-value=2.3 Score=39.03 Aligned_cols=41 Identities=12% Similarity=0.167 Sum_probs=34.9
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHH--hCCCEEEEEeCccchh
Q 012594 5 PHVLVIPF-PAQGHAGPLMKLSTKIA--EHGIKVTFVSTEHMHA 45 (460)
Q Consensus 5 ~~Il~~~~-~~~gH~~p~~~La~~L~--~rGh~V~~~~~~~~~~ 45 (460)
.+|+|++. |+-|-..-...||..|+ ++|++|.++..++...
T Consensus 18 ~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~~~ 61 (348)
T 3io3_A 18 LKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAHN 61 (348)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCH
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 46776665 78999999999999999 8999999999986544
No 81
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=85.63 E-value=2.6 Score=37.17 Aligned_cols=114 Identities=17% Similarity=0.050 Sum_probs=61.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVR 84 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 84 (460)
||||+..==+. +---+..|++.|++.| +|+++.+...+..+.... .....+++..++.+-.........+..
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si----Tl~~pl~~~~~~~~~~~~~~v~GTPaD-- 72 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI----TLHKPLRMYEVDLCGFRAIATSGTPSD-- 72 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC----CCSSCBCEEEEECSSSEEEEESSCHHH--
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCCCceEEECCcHHH--
Confidence 36666653222 2233778999999888 999999988776553322 111234444443210000001111111
Q ss_pred HHHHhhchHHHHHHHHHHhhcCCCCCccEEEeC-----------CCcc---hHHHHHHHhCCceEEEccc
Q 012594 85 QSMLTVMPGCLRNLIEKVNKSNDCEKISCVIAD-----------LTVG---WALEVAEQMGIARAAVIPY 140 (460)
Q Consensus 85 ~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D-----------~~~~---~~~~~A~~lgiP~v~~~~~ 140 (460)
+++--+..+ . .+||+||+- .+++ .++.-|..+|||.|.+|..
T Consensus 73 ---------CV~lal~~l-~----~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 73 ---------TVYLATFGL-G----RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ---------HHHHHHHHH-T----SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ---------HHHHHHhcC-C----CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 122222333 3 789999962 2222 4455567889999999864
No 82
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=85.15 E-value=7.5 Score=33.59 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=30.3
Q ss_pred EEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPF--PAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~--~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
||+.+.. |+-|-..-...||..|+++|++|.++=.+.
T Consensus 3 ~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 3 RIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 5554433 688999999999999999999999996554
No 83
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=84.99 E-value=0.51 Score=44.73 Aligned_cols=40 Identities=13% Similarity=0.165 Sum_probs=30.5
Q ss_pred CCCEEEEEcCC---C--ccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 3 REPHVLVIPFP---A--QGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 3 ~~~~Il~~~~~---~--~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+++||++++.. + .|=......++++|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 46799887743 1 1323468899999999999999999864
No 84
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=84.22 E-value=4.6 Score=37.80 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=28.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|++++||+++..+.. .+.+++.+++.|++|.++..+.
T Consensus 4 m~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 4 MYDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp --CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred ccCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 666779999987754 3568999999999999997643
No 85
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=84.02 E-value=3.9 Score=34.49 Aligned_cols=103 Identities=10% Similarity=0.029 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCcc-c---hhHHhhccCccccCCCCeEEEEcCCCCCCCC
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEH-M---HAKITASMPQKAEQSSLITMVSIPDGLESHE 74 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 74 (460)
|.++.||+++.+|+.+- +.+|.+.+.+. +++|..+.++. . .+..++. |+.+..++...
T Consensus 5 ~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~---------gIp~~~~~~~~---- 68 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY---------GIPTFVVKRKP---- 68 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCBTT----
T ss_pred CCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCccc----
Confidence 66777998887666443 34455555443 37888776643 2 2234444 78777665210
Q ss_pred cCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 75 ADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
..+ .++++.+++ .+||+||.-.+.. -...+-+.+.-.++-++++.
T Consensus 69 --~~~----------------~~~~~~L~~----~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSL 114 (215)
T 3kcq_A 69 --LDI----------------EHISTVLRE----HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSL 114 (215)
T ss_dssp --BCH----------------HHHHHHHHH----TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred --CCh----------------HHHHHHHHH----hCCCEEEEeCCceEeCHHHHhhccCCeEEECccc
Confidence 000 334444444 8999999887643 55556667777788777664
No 86
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=83.48 E-value=4.2 Score=35.10 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=28.4
Q ss_pred CEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEE
Q 012594 5 PHVLVIPF--PAQGHAGPLMKLSTKIAEHGIKVTFV 38 (460)
Q Consensus 5 ~~Il~~~~--~~~gH~~p~~~La~~L~~rGh~V~~~ 38 (460)
+|.+|++. ...|-..-...|++.|+++|.+|.++
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~f 56 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILL 56 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEE
Confidence 45655553 47789999999999999999999998
No 87
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=82.97 E-value=5.9 Score=32.74 Aligned_cols=40 Identities=13% Similarity=0.304 Sum_probs=31.8
Q ss_pred EEEEEc-CCCccChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 012594 6 HVLVIP-FPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHA 45 (460)
Q Consensus 6 ~Il~~~-~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~ 45 (460)
.|.|.+ -|+-|-..-...||..|+++|++|.++-.+....
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~ 43 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMS 43 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCC
Confidence 344543 3788999999999999999999999998765433
No 88
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=82.95 E-value=4.7 Score=35.19 Aligned_cols=39 Identities=10% Similarity=0.039 Sum_probs=35.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
++.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 356999999999999999999999999999999988654
No 89
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=82.41 E-value=2.5 Score=34.90 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=37.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhh
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITA 49 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~ 49 (460)
||++...|+.|-+ =...+.++|.++|++|.++.++.....+..
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 8999999998855 578899999999999999999888777765
No 90
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=82.29 E-value=1.2 Score=36.57 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=37.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~ 50 (460)
|.+ ||++...|+.+=+ =...+.+.|.++|++|.++.++.....+...
T Consensus 1 ~~k--~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 1 MYG--KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCC--CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCGG
T ss_pred CCC--EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 555 8988888887666 5689999999999999999998877666443
No 91
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=82.14 E-value=1.7 Score=36.10 Aligned_cols=45 Identities=16% Similarity=0.122 Sum_probs=38.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeCccchhHHhhc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEH-GIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~r-Gh~V~~~~~~~~~~~~~~~ 50 (460)
+||++...|+.|-+. ...|.+.|.++ |++|.++.++.....+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 378888888887766 89999999999 9999999998877777543
No 92
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=81.77 E-value=2.6 Score=32.73 Aligned_cols=39 Identities=13% Similarity=0.103 Sum_probs=34.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+.||++.+.++-.|-....-++..|..+|++|.++...-
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~ 41 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLS 41 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 468999999999999999999999999999999886543
No 93
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=81.58 E-value=7 Score=35.21 Aligned_cols=98 Identities=15% Similarity=0.066 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccch--------------hHHhhccCccccCCCCeEEEEcCC
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH--------------AKITASMPQKAEQSSLITMVSIPD 68 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~i~~ 68 (460)
+++||+|+-.|..+- ...+.|.++||+|..+.+.+.. +...+. ++.++. +.
T Consensus 3 ~mmrIvf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~---------gIpv~~-~~ 67 (317)
T 3rfo_A 3 AMIKVVFMGTPDFSV-----PVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKH---------GIPVLQ-PL 67 (317)
T ss_dssp TTSEEEEECCSTTHH-----HHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHT---------TCCEEC-CS
T ss_pred CceEEEEEeCCHHHH-----HHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHc---------CCCEEc-cc
Confidence 357999998886543 4457788889999988765422 222232 555432 11
Q ss_pred CCCCCCcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccch
Q 012594 69 GLESHEADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYAP 142 (460)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 142 (460)
.+ . + . +.++.+++ .+||++|+-.+.. -...+-+.....++-++++..
T Consensus 68 ~~-----~--~-------------~---~~~~~l~~----~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlL 115 (317)
T 3rfo_A 68 RI-----R--E-------------K---DEYEKVLA----LEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLL 115 (317)
T ss_dssp CT-----T--S-------------H---HHHHHHHH----HCCSEEEESSCCSCCCHHHHHSSTTCEEEEESSCT
T ss_pred cC-----C--C-------------H---HHHHHHHh----cCCCEEEEcCchhhCCHHHHhhCcCCEEEECCccC
Confidence 11 0 0 1 11333444 7899999886533 444444555666888887764
No 94
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=81.11 E-value=4.3 Score=31.49 Aligned_cols=47 Identities=17% Similarity=0.215 Sum_probs=36.0
Q ss_pred CCEEEEEcC-CCccChHH-HHHHHHHHHhCCCEEEEEeCccchhHHhhc
Q 012594 4 EPHVLVIPF-PAQGHAGP-LMKLSTKIAEHGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 4 ~~~Il~~~~-~~~gH~~p-~~~La~~L~~rGh~V~~~~~~~~~~~~~~~ 50 (460)
.||++++-+ |..-=+.| .+-++..|.++||+|++++++...+.++-.
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 467776554 65544455 678899999999999999999888877654
No 95
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=80.99 E-value=13 Score=31.29 Aligned_cols=103 Identities=10% Similarity=0.051 Sum_probs=61.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCcc----chhHHhhccCccccCCCCeEEEEcCC-CCCCCCcCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEH----MHAKITASMPQKAEQSSLITMVSIPD-GLESHEADR 77 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~ 77 (460)
+||+++..+..+ -+.+|.+.+.+. +|+|..+.+++ ..+..++. ++.+..++. .+. .
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~---------gIp~~~~~~~~~~----~- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA---------GIATHTLIASAFD----S- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT---------TCEEEECCGGGCS----S-
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc---------CCcEEEeCccccc----c-
Confidence 378887766554 256677777655 58887776553 22334444 788776542 111 0
Q ss_pred ccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 78 RDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
+ ..+. .++++.+++ .+||+||+-.+.. -...+-+.+...++-++++.
T Consensus 64 -------r---~~~~---~~~~~~l~~----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 64 -------R---EAYD---RELIHEIDM----YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp -------H---HHHH---HHHHHHHGG----GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred -------h---hhcc---HHHHHHHHh----cCCCEEEEeChhhhCCHHHHhhccCCEEEEccCc
Confidence 0 1111 234555555 8899999887643 45555677777788777664
No 96
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=80.92 E-value=9.4 Score=33.49 Aligned_cols=38 Identities=24% Similarity=0.343 Sum_probs=31.0
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPF--PAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~--~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
++|+++++. |+-|-..-...||..|+++|.+|.++-.+
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 456665543 68899999999999999999999999665
No 97
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=80.56 E-value=7.9 Score=34.85 Aligned_cols=98 Identities=12% Similarity=0.019 Sum_probs=56.8
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc--------------hhHHhhccCccccCCCCeEEEEcCC
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM--------------HAKITASMPQKAEQSSLITMVSIPD 68 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~i~~ 68 (460)
+++||+|+..+..+ ....+.|.+.||+|..+.+.+. .+...+. ++.++. +.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~---------gIpv~~-~~ 66 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK---------GLPVFQ-PV 66 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHT---------TCCEEC-CS
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHc---------CCcEEe-cC
Confidence 46899999876433 4455777778999987766432 2222333 555532 11
Q ss_pred CCCCCCcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccch
Q 012594 69 GLESHEADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYAP 142 (460)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 142 (460)
.+ . .+ ++++.+++ .+||++|+-.+.. -...+-+.....++-++++..
T Consensus 67 ~~-----~---------------~~---~~~~~l~~----~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLL 114 (314)
T 1fmt_A 67 SL-----R---------------PQ---ENQQLVAE----LQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLL 114 (314)
T ss_dssp CS-----C---------------SH---HHHHHHHH----TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSST
T ss_pred CC-----C---------------CH---HHHHHHHh----cCCCEEEEeeccccCCHHHHhhccCCEEEEcCCcC
Confidence 11 0 12 23333444 8899999876533 444445656667888887764
No 98
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=80.44 E-value=6.2 Score=34.15 Aligned_cols=111 Identities=14% Similarity=0.154 Sum_probs=59.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCc-ccHHHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADR-RDLHKV 83 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~ 83 (460)
||||+..==+. |.--+..|++.|++.| +|+++.+...+..+.... .....+++..+... ..... ..+...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ai----Tl~~Pl~~~~~~~~---~~~v~~GTPaDC 72 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSL----TLESSLRTFTFDNG---DIAVQMGTPTDC 72 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC----CCSSCCEEEECTTS---CEEEETCCHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCc----CCCCCeEEEEeCCC---CeEECCCCHHHH
Confidence 46776653332 3333678899998775 999999988776553332 11123555555211 01011 222221
Q ss_pred HHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeC----------CCcch---HHHHHHHhCCceEEEcc
Q 012594 84 RQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIAD----------LTVGW---ALEVAEQMGIARAAVIP 139 (460)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D----------~~~~~---~~~~A~~lgiP~v~~~~ 139 (460)
++--+..+.. .+||+||+- .+++. ++.-|..+|||.|.+|.
T Consensus 73 -----------V~lal~~ll~----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 73 -----------VYLGVNALMR----PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp -----------HHHHHHTTSS----SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred -----------HHHHHhhccC----CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 1111222223 689999963 33332 23334567999999875
No 99
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=79.68 E-value=2.4 Score=34.00 Aligned_cols=40 Identities=20% Similarity=0.347 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
++.||++.+.++-.|-....-++..|..+|++|.++...-
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~ 56 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQ 56 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 3579999999999999999999999999999999987543
No 100
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=79.61 E-value=13 Score=32.16 Aligned_cols=124 Identities=14% Similarity=0.094 Sum_probs=65.7
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeC---c-----cchhHHhhccCccccCCCCeEEEEcCCCCCCC
Q 012594 4 EPHVLVIPF--PAQGHAGPLMKLSTKIAEHGIKVTFVST---E-----HMHAKITASMPQKAEQSSLITMVSIPDGLESH 73 (460)
Q Consensus 4 ~~~Il~~~~--~~~gH~~p~~~La~~L~~rGh~V~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 73 (460)
+++.+|++. ...|-..-...|++.|+++|++|.++=+ . .....+.+.. ......+.+.+....
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~----g~~~~~~~~~~~~p~--- 97 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLA----GVTQLAGLARYPQPM--- 97 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHH----CCCEEEEEEECSSSS---
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHc----CCCCCCCCeeECCCC---
Confidence 345555543 3778999999999999999999999831 1 1112222211 000011212222111
Q ss_pred CcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCc----------chHHHHHHHhCCceEEEcccch
Q 012594 74 EADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTV----------GWALEVAEQMGIARAAVIPYAP 142 (460)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~----------~~~~~~A~~lgiP~v~~~~~~~ 142 (460)
.......++.........+.+.++.+ . .++|+||+|... .....+|+.++.|+|.+.....
T Consensus 98 ---sP~~aa~~~~~~~~~~~~i~~~~~~l---~--~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~ 168 (251)
T 3fgn_A 98 ---APAAAAEHAGMALPARDQIVRLIADL---D--RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADL 168 (251)
T ss_dssp ---CHHHHHHHTTCCCCCHHHHHHHHHTT---C--CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSST
T ss_pred ---ChHHHHHHcCCCCCCHHHHHHHHHHH---H--hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCC
Confidence 11111100000001122344444433 2 679999998631 2456799999999998876654
No 101
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=78.38 E-value=2.5 Score=35.42 Aligned_cols=45 Identities=11% Similarity=-0.018 Sum_probs=32.0
Q ss_pred CCCCEEEEEcCCCccChHH-HHHHHHHHHhCCCEEEEEeCccchhHH
Q 012594 2 DREPHVLVIPFPAQGHAGP-LMKLSTKIAEHGIKVTFVSTEHMHAKI 47 (460)
Q Consensus 2 ~~~~~Il~~~~~~~gH~~p-~~~La~~L~~rGh~V~~~~~~~~~~~~ 47 (460)
-++.||++...|+. ..+- ...+.+.|.++|++|.++.++.....+
T Consensus 3 l~~k~IllgiTGsi-aayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 3 LKGKRIGFGFTGSH-CTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp CTTCEEEEEECSCG-GGGTTSHHHHHHHHHTTCEEEEEECC------
T ss_pred CCCCEEEEEEEChH-HHHHHHHHHHHHHHhCCCEEEEEEehHHHHHH
Confidence 34568998888874 4554 789999999999999999997666433
No 102
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=78.21 E-value=1.4 Score=36.59 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=36.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHh
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKIT 48 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~ 48 (460)
+.||++...|+.|=+. ...|.+.|.++|++|.++.++....++.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 51 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIP 51 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSC
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 4589988888877776 6899999999999999999987666553
No 103
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=78.17 E-value=9.7 Score=32.05 Aligned_cols=105 Identities=10% Similarity=0.072 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHh-CCCEEEEEeCccc----hhHHhhccCccccCCCCeEEEEcCCC-CCCCCcC
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAE-HGIKVTFVSTEHM----HAKITASMPQKAEQSSLITMVSIPDG-LESHEAD 76 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~-rGh~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~ 76 (460)
+++||+++.+|..+-+.. |.+...+ .+++|..+.+++- .+..++. |+.++.++.. ++..
T Consensus 4 ~~~riavl~SG~Gsnl~a---ll~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~---------gIp~~~~~~~~~~~r--- 68 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQA---IIGAIQKGLAIEIRAVISNRADAYGLKRAQQA---------DIPTHIIPHEEFPSR--- 68 (215)
T ss_dssp CCEEEEEEESSCCHHHHH---HHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT---------TCCEEECCGGGSSSH---
T ss_pred CCcEEEEEEeCCcHHHHH---HHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCccccCch---
Confidence 356898888776554443 4444433 3688888776432 2334444 7887776521 1100
Q ss_pred cccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 77 RRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
.... .++++.+++ .+||+||.-.+.. -...+-+.....++-++++.
T Consensus 69 ------------~~~d---~~~~~~l~~----~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 115 (215)
T 3tqr_A 69 ------------TDFE---STLQKTIDH----YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSL 115 (215)
T ss_dssp ------------HHHH---HHHHHHHHT----TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred ------------hHhH---HHHHHHHHh----cCCCEEEEccchhhCCHHHHhhccCCeEEeCccc
Confidence 0011 234455555 8999999876543 45556667777788777664
No 104
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=78.04 E-value=19 Score=30.11 Aligned_cols=103 Identities=12% Similarity=0.014 Sum_probs=57.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCccc----hhHHhhccCccccCCCCeEEEEcCCCCCCCCcCccc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEHM----HAKITASMPQKAEQSSLITMVSIPDGLESHEADRRD 79 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 79 (460)
||+++..|+.+-+ .+|.+.+.+. +|+|..+.+.+- .+..++. ++.+..++.... ..
T Consensus 2 riaVl~SG~Gs~L---~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~----~~-- 63 (209)
T 1meo_A 2 RVAVLISGTGSNL---QALIDSTREPNSSAQIDIVISNKAAVAGLDKAERA---------GIPTRVINHKLY----KN-- 63 (209)
T ss_dssp EEEEEESSSCTTH---HHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHT---------TCCEEECCGGGS----SS--
T ss_pred eEEEEEECCchHH---HHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHc---------CCCEEEECcccc----Cc--
Confidence 7888776666543 3444555543 799987765542 2333444 777765542110 00
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 80 LHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
+ ..+.. ++++.+++ .+||+||+-.+.. -...+-+.+...++-++++.
T Consensus 64 -----r---~~~~~---~~~~~l~~----~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 111 (209)
T 1meo_A 64 -----R---VEFDS---AIDLVLEE----FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSL 111 (209)
T ss_dssp -----H---HHHHH---HHHHHHHH----TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred -----h---hhhhH---HHHHHHHh----cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccCc
Confidence 0 01112 23334444 8999999776543 44555566777788777664
No 105
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=78.03 E-value=9.2 Score=34.39 Aligned_cols=33 Identities=12% Similarity=0.075 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+||+|+-.+..+- ...+.|.++||+|..+.+.+
T Consensus 3 mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 3 LKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECCC
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeCC
Confidence 6999998886653 44677888999998887743
No 106
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=77.05 E-value=2.5 Score=35.28 Aligned_cols=43 Identities=19% Similarity=0.087 Sum_probs=35.2
Q ss_pred CCEEEEEcCCCccChH-HHHHHHHHHHhCCCEEEEEeCccchhHH
Q 012594 4 EPHVLVIPFPAQGHAG-PLMKLSTKIAEHGIKVTFVSTEHMHAKI 47 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~-p~~~La~~L~~rGh~V~~~~~~~~~~~~ 47 (460)
+.||++...|+. ..+ =...|.+.|.++|++|.++.++.....+
T Consensus 7 ~k~I~lgiTGs~-aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 7 GKHVGFGLTGSH-CTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TCEEEEECCSCG-GGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCEEEEEEEChH-HHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 458998888874 444 7899999999999999999997766655
No 107
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=76.36 E-value=13 Score=33.22 Aligned_cols=39 Identities=28% Similarity=0.376 Sum_probs=31.1
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPF--PAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~--~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.+|+++++. |+-|-..-...||..|+++|.+|.++-.+.
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 345554443 688999999999999999999999997654
No 108
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=76.16 E-value=25 Score=27.16 Aligned_cols=36 Identities=19% Similarity=0.175 Sum_probs=29.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
.+++++..|+ | +.|++.+++.|.++|.+|+++ ..+.
T Consensus 19 ~~~llIaGG~-G-iaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEECcC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4788887554 3 899999999999999999998 6553
No 109
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=75.98 E-value=8.2 Score=34.56 Aligned_cols=96 Identities=6% Similarity=-0.047 Sum_probs=54.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc-----------hhHHhhccCccccCCCCeEEEEcCCCCCCC
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM-----------HAKITASMPQKAEQSSLITMVSIPDGLESH 73 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 73 (460)
+||+|+..|.. .....+.|.++||+|..+.+.+. .+...+. ++.++.... .
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~---------gIpv~~~~~-~--- 62 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER---------GIPVYAPDN-V--- 62 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH---------TCCEECCSC-C---
T ss_pred CEEEEEEcCHH-----HHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHc---------CCCEECCCc-C---
Confidence 47888865322 24456777788999987776532 2233333 555543221 0
Q ss_pred CcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccch
Q 012594 74 EADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYAP 142 (460)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 142 (460)
.+ + ++++.+++ .+||++|+-.+.. -...+-+.....++-++++..
T Consensus 63 ----~~-------------~---~~~~~l~~----~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLL 108 (305)
T 2bln_A 63 ----NH-------------P---LWVERIAQ----LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLL 108 (305)
T ss_dssp ----CS-------------H---HHHHHHHH----TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCT
T ss_pred ----Cc-------------H---HHHHHHHh----cCCCEEEEeccccccCHHHHhcCcCCEEEecCCcC
Confidence 00 1 23344444 8899999876533 344444555566888887744
No 110
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=75.09 E-value=4.1 Score=34.18 Aligned_cols=45 Identities=18% Similarity=0.130 Sum_probs=37.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~ 50 (460)
+.||++...|+.+-+. ...|.+.|.++| +|.++.++....++...
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 3589999989988776 889999999999 99999998877766444
No 111
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=74.84 E-value=7.1 Score=32.90 Aligned_cols=105 Identities=7% Similarity=-0.001 Sum_probs=57.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHh-CCCEEEEEeCccch---hHHhhccCccccCCCCeEEEEcCCCCCCCCcCccc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAE-HGIKVTFVSTEHMH---AKITASMPQKAEQSSLITMVSIPDGLESHEADRRD 79 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~-rGh~V~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 79 (460)
++||+|+.+|+.+-+.. |.+.+.+ .+++|..+.+++.. +..++. |+.++.++... . ..
T Consensus 12 ~~ri~vl~SG~gsnl~a---ll~~~~~~~~~eI~~Vis~~~a~~~~~A~~~---------gIp~~~~~~~~--~--~~-- 73 (215)
T 3da8_A 12 PARLVVLASGTGSLLRS---LLDAAVGDYPARVVAVGVDRECRAAEIAAEA---------SVPVFTVRLAD--H--PS-- 73 (215)
T ss_dssp SEEEEEEESSCCHHHHH---HHHHSSTTCSEEEEEEEESSCCHHHHHHHHT---------TCCEEECCGGG--S--SS--
T ss_pred CcEEEEEEeCChHHHHH---HHHHHhccCCCeEEEEEeCCchHHHHHHHHc---------CCCEEEeCccc--c--cc--
Confidence 45899888776554433 3344432 34688877665532 233444 77776664110 0 00
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 80 LHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
+ ..+. .++++.+++ .+||+||.-.+.. -...+-+.+...++-++++.
T Consensus 74 -----r---~~~d---~~~~~~l~~----~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSL 121 (215)
T 3da8_A 74 -----R---DAWD---VAITAATAA----HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPAL 121 (215)
T ss_dssp -----H---HHHH---HHHHHHHHT----TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSC
T ss_pred -----h---hhhh---HHHHHHHHh----hCCCEEEEcCchhhCCHHHHhhccCCeEEeCccc
Confidence 0 0112 234445555 8999999876543 44555566666678777664
No 112
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=74.63 E-value=32 Score=27.77 Aligned_cols=77 Identities=13% Similarity=0.097 Sum_probs=43.0
Q ss_pred EEeeccCchh-hcC-CCcccceeeccChhhhh---HhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCH
Q 012594 333 KLVEWAPQEK-VLG-HPSVACFLSHCGWNSTL---EGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITR 407 (460)
Q Consensus 333 ~~~~~~p~~~-ll~-~~~~~~~I~hgG~~sv~---eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~ 407 (460)
.++++.+... ++. .++. .++--||.||+. |++.+++|++.+|.+. .....+.+. -...... .-++
T Consensus 92 i~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~-----~~~~ 161 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHV-----AADV 161 (176)
T ss_dssp EECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEE-----ESSH
T ss_pred EEcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEE-----cCCH
Confidence 3456666553 333 3333 355568889874 5577999999999842 111122221 1222221 1267
Q ss_pred HHHHHHHHHHhc
Q 012594 408 QEIQRQVKALLN 419 (460)
Q Consensus 408 ~~l~~~i~~~l~ 419 (460)
+++.+.+.+.++
T Consensus 162 ~e~~~~l~~~~~ 173 (176)
T 2iz6_A 162 AGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777776653
No 113
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=74.56 E-value=15 Score=32.50 Aligned_cols=39 Identities=18% Similarity=0.282 Sum_probs=31.1
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPF--PAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~--~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+.|++.++. |+-|-..-...||..|+++|.+|.++-.+.
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 345654443 688999999999999999999999996654
No 114
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=74.46 E-value=14 Score=34.92 Aligned_cols=40 Identities=20% Similarity=0.364 Sum_probs=33.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHA 45 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~ 45 (460)
.|+++..++.|-..-...||..|+++|++|.++..+.+..
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 3456666799999999999999999999999999876543
No 115
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=73.23 E-value=32 Score=27.08 Aligned_cols=36 Identities=19% Similarity=0.175 Sum_probs=29.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
.+++++..|+ | +.|++.+++.|.++|.+|+++ ..+.
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 4788887555 3 999999999999999999999 6553
No 116
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=72.98 E-value=24 Score=32.18 Aligned_cols=101 Identities=12% Similarity=0.055 Sum_probs=58.0
Q ss_pred CEEEEEcCCCcc--C--hHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccH
Q 012594 5 PHVLVIPFPAQG--H--AGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDL 80 (460)
Q Consensus 5 ~~Il~~~~~~~g--H--~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 80 (460)
.-|++.|..+.. . ..-+.+|++.|.++|++|.+...+...+..++.... -.-....+.+..
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~-----~~~~~~~l~g~~---------- 250 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQ-----METKPIVATGKF---------- 250 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHT-----CSSCCEECTTCC----------
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHh-----cccccEEeeCCC----------
Confidence 346666655332 1 234889999999889999987776655544332100 000111111100
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcccc
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~ 141 (460)
.+.++...+ .+.|++|+. ......+|..+|+|.|.++...
T Consensus 251 -------------sl~e~~ali------~~a~~~i~~--DsG~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 251 -------------QLGPLAAAM------NRCNLLITN--DSGPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp -------------CHHHHHHHH------HTCSEEEEE--SSHHHHHHHTTTCCEEEECSSC
T ss_pred -------------CHHHHHHHH------HhCCEEEEC--CCCHHHHHHhcCCCEEEEECCC
Confidence 122333333 237999975 3566777999999999986543
No 117
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=72.89 E-value=6 Score=33.19 Aligned_cols=39 Identities=8% Similarity=0.006 Sum_probs=35.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+.+|++.+.++-.|-....-++..|..+|++|.++...-
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~v 126 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDI 126 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSB
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 458999999999999999999999999999999987654
No 118
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=72.75 E-value=44 Score=30.08 Aligned_cols=102 Identities=10% Similarity=0.094 Sum_probs=55.2
Q ss_pred EEEEEcCCCccC-----hHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccH
Q 012594 6 HVLVIPFPAQGH-----AGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDL 80 (460)
Q Consensus 6 ~Il~~~~~~~gH-----~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 80 (460)
.|++.|+...+. ..-+..+++.|.++|++|.++..+...+..++.... ...........+.+..
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~-~~~~~~~~~~~l~g~~---------- 250 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAA-LNTEQQAWCRNLAGET---------- 250 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTT-SCHHHHTTEEECTTTS----------
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHh-hhhccccceEeccCcC----------
Confidence 466666442221 225789999999899999988766554433222100 0000000111221100
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcc
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIP 139 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~ 139 (460)
.+.++...+ .+.|++|+.- .....+|..+|+|.|.++.
T Consensus 251 -------------sl~e~~ali------~~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 251 -------------QLDQAVILI------AACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp -------------CHHHHHHHH------HTSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred -------------CHHHHHHHH------HhCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 122333333 2379999763 5567778899999998764
No 119
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=72.62 E-value=22 Score=33.39 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=50.4
Q ss_pred CCCCC-EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCccc
Q 012594 1 MDREP-HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRD 79 (460)
Q Consensus 1 m~~~~-~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 79 (460)
|.++. ||+++. ++..+ . .+.++.++.|++|+++............ .--+++.++... +
T Consensus 1 M~~~~k~l~Il~-~~~~~-~---~i~~aa~~lG~~vv~v~~~~~~~~~~~~--------~~d~~~~~~~~~--------d 59 (425)
T 3vot_A 1 MTKRNKNLAIIC-QNKHL-P---FIFEEAERLGLKVTFFYNSAEDFPGNLP--------AVERCVPLPLFE--------D 59 (425)
T ss_dssp -CCCCCEEEEEC-CCTTC-C---HHHHHHHHTTCEEEEEEETTSCCCCSCT--------TEEEEEEECTTT--------C
T ss_pred CCCCCcEEEEEC-CChhH-H---HHHHHHHHCCCEEEEEECCCcccccCHh--------hccEEEecCCCC--------C
Confidence 66664 566665 33333 2 3567778889999998654321110000 011334443211 1
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeC--CCcchHHHHHHHhCCce
Q 012594 80 LHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIAD--LTVGWALEVAEQMGIAR 134 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D--~~~~~~~~~A~~lgiP~ 134 (460)
.. .+. ..+.++.+. .++|.|+.- .....+..+|+.+|+|.
T Consensus 60 ~~----~~~----~~~~~~~~~-------~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 60 EE----AAM----DVVRQTFVE-------FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HH----HHH----HHHHHHHHH-------SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HH----HHH----HHHHHhhhh-------cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 11 111 123344444 789998853 22235667889999994
No 120
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=72.55 E-value=14 Score=33.51 Aligned_cols=41 Identities=15% Similarity=0.171 Sum_probs=33.8
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 012594 5 PHVLVIPF-PAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHA 45 (460)
Q Consensus 5 ~~Il~~~~-~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~ 45 (460)
.+|+|++. |+-|-..-...||..|+++|++|.++..+....
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~~~ 60 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHN 60 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTTCH
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCCcC
Confidence 35655554 789999999999999999999999999886533
No 121
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=72.47 E-value=13 Score=31.61 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.++||.|+-.|..|- .||+.|+++||+|+.+..+
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 357999999998884 5899999999999987664
No 122
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=72.31 E-value=23 Score=33.80 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=54.9
Q ss_pred cChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcC------CCCCCCCcCcccHHHHHHHHHh
Q 012594 16 GHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIP------DGLESHEADRRDLHKVRQSMLT 89 (460)
Q Consensus 16 gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~------~~~~~~~~~~~~~~~~~~~~~~ 89 (460)
++=.-+..+|+.|.+.|.++. +|......+++. |+.+..+. +-+...- .+-++...-..+.+
T Consensus 18 sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~vTgfPEil~GRV-KTLHP~ihgGiLa~ 85 (523)
T 3zzm_A 18 YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQLTGFPEVLDGRV-KTLHPRVHAGLLAD 85 (523)
T ss_dssp SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHHHHSCCCCTTTTS-SSCSHHHHHHHHCC
T ss_pred eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccccCCCchhhCCcc-ccCCchhhhhhccC
Confidence 345558899999999998875 677888889888 67766653 2222222 44445444444433
Q ss_pred hchHHHHHHHHHHhhcCCCCCccEEEeCCCcc
Q 012594 90 VMPGCLRNLIEKVNKSNDCEKISCVIADLTVG 121 (460)
Q Consensus 90 ~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~ 121 (460)
.-.+.-.+-+++..- ...|+||++.+-+
T Consensus 86 r~~~~h~~~l~~~~i----~~iDlVvvNLYPF 113 (523)
T 3zzm_A 86 LRKSEHAAALEQLGI----EAFELVVVNLYPF 113 (523)
T ss_dssp TTSHHHHHHHHHHTC----CCCSEEEEECCCH
T ss_pred CCCHHHHHHHHHCCC----CceeEEEEeCCCh
Confidence 222222222333333 7899999996444
No 123
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=71.53 E-value=37 Score=27.11 Aligned_cols=145 Identities=14% Similarity=0.173 Sum_probs=78.1
Q ss_pred CCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCccc
Q 012594 271 VGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVA 350 (460)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~ 350 (460)
+.|.|-|-+||.+ +....++....++.++..+-..+.+. ...|+.+. .|+-. ...-.++
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~l~----------~~~~~---a~~~g~~ 69 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------HRMPDEMF----------DYAEK---ARERGLR 69 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHH----------HHHHH---HTTTTCS
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------ccCHHHHH----------HHHHH---HHhcCCe
Confidence 3557888888843 67788888889999998875555433 23444422 11111 1112233
Q ss_pred ceeeccCh----hhhhHhhhcCCceeeccccchhhhhH---HHHHh-hhcceeEeecC-CCCccCHHHHHHHHHHHhcCh
Q 012594 351 CFLSHCGW----NSTLEGLSMGVPFLCWPYFADQYQNR---NYIFD-AWKIGLRFFPD-ENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 351 ~~I~hgG~----~sv~eal~~GvP~i~~P~~~dQ~~~a---~~v~~-~lg~g~~~~~~-~~~~~~~~~l~~~i~~~l~~~ 421 (460)
.+|.-.|. .++..+ .--+|+|.+|....-..-. .-+.. --|+.+..-.. .++..++.-++..|- .++|+
T Consensus 70 ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~IL-a~~d~ 147 (173)
T 4grd_A 70 AIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSIL-SGNSV 147 (173)
T ss_dssp EEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHH-TTSCH
T ss_pred EEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHH-cCCCH
Confidence 36665553 244444 4579999999754321111 11111 01444432110 012234454555553 34688
Q ss_pred HHHHHHHHHHHHHHHHh
Q 012594 422 GIKANALKMKQMARKSL 438 (460)
Q Consensus 422 ~~~~~a~~l~~~~~~~~ 438 (460)
+++++.+..+++.++..
T Consensus 148 ~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 148 DYANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999998888887653
No 124
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=69.82 E-value=37 Score=30.22 Aligned_cols=105 Identities=10% Similarity=0.122 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCcc--chhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEH--MHAKITASMPQKAEQSSLITMVSIPDGLESHEADRR 78 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 78 (460)
+++||+++.++. || -+.+|...-.+- +.+|..+.++. .....++. |+.++.++.......
T Consensus 104 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~~r~---- 167 (302)
T 3o1l_A 104 QKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH---------DIPYYHVPVDPKDKE---- 167 (302)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT---------TCCEEECCCCSSCCH----
T ss_pred CCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc---------CCCEEEcCCCcCCHH----
Confidence 467999888666 44 345555554432 46888776643 34444444 888888764221110
Q ss_pred cHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 79 DLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
.... ++++.+++ .+||+||.-.+.- -...+.+.+.-.++-++++.
T Consensus 168 -----------~~~~---~~~~~l~~----~~~DliVlagym~IL~~~~l~~~~~~~INiHpSl 213 (302)
T 3o1l_A 168 -----------PAFA---EVSRLVGH----HQADVVVLARYMQILPPQLCREYAHQVINIHHSF 213 (302)
T ss_dssp -----------HHHH---HHHHHHHH----TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESSC
T ss_pred -----------HHHH---HHHHHHHH----hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCccc
Confidence 0112 33344444 8999999876643 45556666766788777664
No 125
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=69.73 E-value=6.5 Score=35.80 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=35.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHH
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKI 47 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~ 47 (460)
=+++...|+.|-..-.+.+|..++..|+.|.|++.+-..+.+
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql 89 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQL 89 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHH
Confidence 356777789999999999999999999999999987654443
No 126
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=69.68 E-value=19 Score=30.48 Aligned_cols=41 Identities=15% Similarity=0.208 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEcc
Q 012594 92 PGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIP 139 (460)
Q Consensus 92 ~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~ 139 (460)
...++..++.+++ ..+|+||.|. .+..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~----~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA----NGTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH----CCCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 4567788888888 8899999984 468899999999999884
No 127
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=68.81 E-value=16 Score=30.62 Aligned_cols=104 Identities=10% Similarity=-0.000 Sum_probs=58.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCcc-c---hhHHhhccCccccCCCCeEEEEcCCC-CCCCCcC
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEH-M---HAKITASMPQKAEQSSLITMVSIPDG-LESHEAD 76 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~ 76 (460)
+.||+++.+|+.+- +.+|.+.+.+. .++|..+.++. . .+..++. |+.++.++.. +..
T Consensus 7 ~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~---------gIp~~~~~~~~~~~---- 70 (209)
T 4ds3_A 7 RNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA---------GIATQVFKRKDFAS---- 70 (209)
T ss_dssp CEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCGGGSSS----
T ss_pred CccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc---------CCCEEEeCccccCC----
Confidence 45898887666443 44555666543 36888776643 2 2234444 7887766521 110
Q ss_pred cccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 77 RRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
+ ..+...+.+.++. .+||+||.-.+.. -...+-+.+.-.++-++++.
T Consensus 71 --------r---~~~d~~~~~~l~~-------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 118 (209)
T 4ds3_A 71 --------K---EAHEDAILAALDV-------LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPSL 118 (209)
T ss_dssp --------H---HHHHHHHHHHHHH-------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESSC
T ss_pred --------H---HHHHHHHHHHHHh-------cCCCEEEEeccccCcCHHHHhhccCCeEEECCcc
Confidence 0 1112233344444 8899999876543 44455556666678776664
No 128
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=67.46 E-value=45 Score=26.54 Aligned_cols=145 Identities=15% Similarity=0.135 Sum_probs=81.4
Q ss_pred CcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccc
Q 012594 272 GSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVAC 351 (460)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~ 351 (460)
+|.|-|-+||. .+....++....++.++..+-..+.+. ...|+.+.+ |+.+ ...-.++.
T Consensus 11 ~~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~---a~~~g~~V 69 (170)
T 1xmp_A 11 KSLVGVIMGST--SDWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFE----------YAET---ARERGLKV 69 (170)
T ss_dssp CCSEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHH---TTTTTCCE
T ss_pred CCcEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHH----------HHHH---HHhCCCcE
Confidence 45777888884 367788888889999998875555433 234444221 1111 00111334
Q ss_pred eeeccChh----hhhHhhhcCCceeeccccch--hhhhHH-HHHh--hhcceeEe-ecCCCCccCHHHHHHHHHHHhcCh
Q 012594 352 FLSHCGWN----STLEGLSMGVPFLCWPYFAD--QYQNRN-YIFD--AWKIGLRF-FPDENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 352 ~I~hgG~~----sv~eal~~GvP~i~~P~~~d--Q~~~a~-~v~~--~lg~g~~~-~~~~~~~~~~~~l~~~i~~~l~~~ 421 (460)
+|.=.|.. ++..++ .-+|+|.+|.... ....+- -+.. . |+.+.. ..++.+..++.-++..|. -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 77666643 334333 4789999998542 111111 1111 2 454321 110002356666666665 45689
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 012594 422 GIKANALKMKQMARKSLVE 440 (460)
Q Consensus 422 ~~~~~a~~l~~~~~~~~~~ 440 (460)
+++++.+..+++.++...+
T Consensus 147 ~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999988875433
No 129
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=67.36 E-value=4.1 Score=30.87 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=26.5
Q ss_pred HHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHH---hCCceEEEc
Q 012594 97 NLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQ---MGIARAAVI 138 (460)
Q Consensus 97 ~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~---lgiP~v~~~ 138 (460)
+.++.+.. .+||+||.|...+ .|..+++. .++|+|+++
T Consensus 44 eAl~~~~~----~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 44 EALDIARK----GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHH----CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHh----CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 34444445 8899999999777 55666554 478988655
No 130
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=67.35 E-value=4.2 Score=34.06 Aligned_cols=46 Identities=26% Similarity=0.255 Sum_probs=35.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHh-CCCEEEEEeCccchhHHhhc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAE-HGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~-rGh~V~~~~~~~~~~~~~~~ 50 (460)
+.||++...|+.+=+. ...|.+.|.+ +|++|.++.++....++...
T Consensus 19 ~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 19 KFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp SEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred CCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 4589888888877554 5899999998 89999999998877766544
No 131
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=66.92 E-value=39 Score=26.66 Aligned_cols=139 Identities=11% Similarity=0.129 Sum_probs=77.5
Q ss_pred cEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccce
Q 012594 273 SVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACF 352 (460)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~ 352 (460)
|.|-|-+||. .+....++....++..+..+-..+.+. ...|+.+. .|+.... ..-..+.+
T Consensus 3 ~~V~Iimgs~--SD~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~~~----------~~~~~a~--~~~~~~Vi 62 (159)
T 3rg8_A 3 PLVIILMGSS--SDMGHAEKIASELKTFGIEYAIRIGSA------HKTAEHVV----------SMLKEYE--ALDRPKLY 62 (159)
T ss_dssp CEEEEEESSG--GGHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHHHH--TSCSCEEE
T ss_pred CeEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHH----------HHHHHhh--hcCCCcEE
Confidence 3566777773 367778888888888988775555433 23444432 1111111 00123447
Q ss_pred eeccChh----hhhHhhhcCCceeeccccch---hhh-hHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHH
Q 012594 353 LSHCGWN----STLEGLSMGVPFLCWPYFAD---QYQ-NRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIK 424 (460)
Q Consensus 353 I~hgG~~----sv~eal~~GvP~i~~P~~~d---Q~~-~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~ 424 (460)
|.-.|.. ++..++ .-+|+|.+|...- -.+ ++-.=.-. |+.+.-- ++..++..++..|.. +.|++++
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vqmp~-GvpVatv---~~~~nAa~lA~~Il~-~~d~~l~ 136 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLRMPS-GISPALV---LEPKNAALLAARIFS-LYDKEIA 136 (159)
T ss_dssp EEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHCCCT-TCCCEEC---CSHHHHHHHHHHHHT-TTCHHHH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHhCCC-CCceEEe---cCchHHHHHHHHHHh-CCCHHHH
Confidence 7777743 444443 6689999996421 111 11110111 4443321 255666666666644 3588899
Q ss_pred HHHHHHHHHHHHH
Q 012594 425 ANALKMKQMARKS 437 (460)
Q Consensus 425 ~~a~~l~~~~~~~ 437 (460)
++.+..+++..+.
T Consensus 137 ~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 137 DSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9998888877763
No 132
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=66.76 E-value=46 Score=26.38 Aligned_cols=144 Identities=14% Similarity=0.135 Sum_probs=80.0
Q ss_pred cEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccce
Q 012594 273 SVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACF 352 (460)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~ 352 (460)
|.|-|-+||. .+....++....++..+..+-..+.+. ...|+.+. .|+.. +....++.+
T Consensus 6 p~V~IimgS~--SD~~v~~~a~~~l~~~gi~~ev~V~Sa------HRtp~~l~----------~~~~~---~~~~g~~Vi 64 (166)
T 3oow_A 6 VQVGVIMGSK--SDWSTMKECCDILDNLGIGYECEVVSA------HRTPDKMF----------DYAET---AKERGLKVI 64 (166)
T ss_dssp EEEEEEESSG--GGHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHH---TTTTTCCEE
T ss_pred CeEEEEECcH--HhHHHHHHHHHHHHHcCCCEEEEEEcC------cCCHHHHH----------HHHHH---HHhCCCcEE
Confidence 4577777873 367778888888888888765555432 23344422 12111 111223448
Q ss_pred eeccChh----hhhHhhhcCCceeeccccchhh------hhHHHHHhhhcceeEee-cCCCCccCHHHHHHHHHHHhcCh
Q 012594 353 LSHCGWN----STLEGLSMGVPFLCWPYFADQY------QNRNYIFDAWKIGLRFF-PDENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 353 I~hgG~~----sv~eal~~GvP~i~~P~~~dQ~------~~a~~v~~~lg~g~~~~-~~~~~~~~~~~l~~~i~~~l~~~ 421 (460)
|.-.|.. ++..+ ..-+|+|.+|...-.. .-.-.... |+++..- .++.+..++.-++..|.. +.|+
T Consensus 65 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--gvpVatV~I~~ag~~nAa~lAa~Il~-~~d~ 140 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQMPA--GIPVATFAIGMAGAKNAALFAASILQ-HTDI 140 (166)
T ss_dssp EEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHHHHHHHHHHG-GGCH
T ss_pred EEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhcCCC--CCceEEEecCCccchHHHHHHHHHHc-CCCH
Confidence 8776643 33333 3468999999853211 11111221 4444331 100013455555555543 3589
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q 012594 422 GIKANALKMKQMARKSLVEG 441 (460)
Q Consensus 422 ~~~~~a~~l~~~~~~~~~~~ 441 (460)
+++++.+..++++++...+.
T Consensus 141 ~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 141 NIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999988765443
No 133
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=66.59 E-value=4.2 Score=37.33 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=26.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|++++||+|+-.|..| ..+|..|+++||+|+++...
T Consensus 1 mm~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 6667899999877666 34788899999999998664
No 134
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=66.13 E-value=4.5 Score=35.30 Aligned_cols=52 Identities=19% Similarity=0.148 Sum_probs=37.0
Q ss_pred ccceeeccChhhhhHhhhc---CCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcC
Q 012594 349 VACFLSHCGWNSTLEGLSM---GVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLND 420 (460)
Q Consensus 349 ~~~~I~hgG~~sv~eal~~---GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 420 (460)
++++|+=||-||+++++.. ++|+++++.. . +| .. ..+.++++.++++++++.
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~G--fl------~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LG--FL------TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CC--SS------CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CC--cc------CcCCHHHHHHHHHHHHcC
Confidence 4559999999999999876 8899888532 1 12 11 224577788888888854
No 135
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=65.91 E-value=28 Score=30.73 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=53.1
Q ss_pred CCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCc
Q 012594 32 GIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKI 111 (460)
Q Consensus 32 Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 111 (460)
..+..+++++.+.-+.+.+ |++...+.+.-+..+ .....+.++++.+++ .+.
T Consensus 178 ~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~e---------------ps~~~l~~l~~~ik~----~~v 229 (286)
T 3gi1_A 178 RSKTFVTQHTAFSYLAKRF---------GLKQLGISGISPEQE---------------PSPRQLKEIQDFVKE----YNV 229 (286)
T ss_dssp SCCEEEEEESCCHHHHHHT---------TCEEEEEECSCC------------------CCHHHHHHHHHHHHH----TTC
T ss_pred CCCEEEEECCchHHHHHHC---------CCeEeeccccCCCCC---------------CCHHHHHHHHHHHHH----cCC
Confidence 3455566777777777777 788776543211111 122445666666666 889
Q ss_pred cEEEeCCCcc--hHHHHHHHhCCceEEEcc
Q 012594 112 SCVIADLTVG--WALEVAEQMGIARAAVIP 139 (460)
Q Consensus 112 D~vv~D~~~~--~~~~~A~~lgiP~v~~~~ 139 (460)
.+|+++.... .+..+|+..|++.+.+.+
T Consensus 230 ~~if~e~~~~~~~~~~la~~~g~~v~~l~p 259 (286)
T 3gi1_A 230 KTIFAEDNVNPKIAHAIAKSTGAKVKTLSP 259 (286)
T ss_dssp CEEEECTTSCTHHHHHHHHTTTCEEEECCC
T ss_pred CEEEEeCCCChHHHHHHHHHhCCeEEEecc
Confidence 9999998666 566789999999986543
No 136
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=65.73 E-value=10 Score=31.94 Aligned_cols=39 Identities=8% Similarity=0.054 Sum_probs=35.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+.||++.+.++-.|-....-++..|..+|++|.++...-
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~v 130 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDV 130 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSC
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCC
Confidence 469999999999999999999999999999999997653
No 137
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=65.59 E-value=20 Score=30.94 Aligned_cols=33 Identities=18% Similarity=0.084 Sum_probs=24.3
Q ss_pred CCccEEE-eCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 109 EKISCVI-ADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 109 ~~~D~vv-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
..||+|| .|+..- .+..=|.++|||.|.+....
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 5799776 565433 67777999999999876543
No 138
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=65.51 E-value=4.4 Score=35.67 Aligned_cols=52 Identities=15% Similarity=0.047 Sum_probs=36.0
Q ss_pred ccceeeccChhhhhHhhhc------CCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcC
Q 012594 349 VACFLSHCGWNSTLEGLSM------GVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLND 420 (460)
Q Consensus 349 ~~~~I~hgG~~sv~eal~~------GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 420 (460)
++++|.=||-||+++++.. ++|++.+|... +|.- ..+.++.+.++++++++.
T Consensus 36 ~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~------------lgfl--------~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH------------LGFY--------ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS------------CCSS--------CCBCGGGHHHHHHHHHTT
T ss_pred CCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC------------CCcC--------CcCCHHHHHHHHHHHHcC
Confidence 4559999999999998764 89999996521 1211 223466677777777753
No 139
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=64.99 E-value=50 Score=26.13 Aligned_cols=140 Identities=11% Similarity=0.143 Sum_probs=77.1
Q ss_pred cEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccce
Q 012594 273 SVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACF 352 (460)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~ 352 (460)
+.|-|-+||. .+....++....++..+..+-..+.+. ...|+.+.+ |+.. .....++.+
T Consensus 4 ~~V~Iimgs~--SD~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~----------~~~~---a~~~g~~Vi 62 (163)
T 3ors_A 4 MKVAVIMGSS--SDWKIMQESCNMLDYFEIPYEKQVVSA------HRTPKMMVQ----------FASE---ARERGINII 62 (163)
T ss_dssp CCEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHH---TTTTTCCEE
T ss_pred CeEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEECC------cCCHHHHHH----------HHHH---HHhCCCcEE
Confidence 3566667773 367778888888999998875555433 234444321 1110 111123447
Q ss_pred eeccChh----hhhHhhhcCCceeeccccchhh--hh---H-HHHHhhhcceeEe-ecCCCCccCHHHHHHHHHHHhcCh
Q 012594 353 LSHCGWN----STLEGLSMGVPFLCWPYFADQY--QN---R-NYIFDAWKIGLRF-FPDENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 353 I~hgG~~----sv~eal~~GvP~i~~P~~~dQ~--~~---a-~~v~~~lg~g~~~-~~~~~~~~~~~~l~~~i~~~l~~~ 421 (460)
|.-.|.. ++..++ .-+|+|.+|....-. .. + -.+ -. |+.+.. ..++.+..++..++..|.. +.|+
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqm-p~-GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~ 138 (163)
T 3ors_A 63 IAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQM-PG-GIPVATTAIGAAGAKNAGILAARMLS-IQNP 138 (163)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTC-CT-TSCCEECCSTHHHHHHHHHHHHHHHH-TTCT
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhC-CC-CCceEEEEcCCcccHHHHHHHHHHHh-CCCH
Confidence 7766643 444443 668999999754311 11 1 111 11 442222 1100023455556655544 4588
Q ss_pred HHHHHHHHHHHHHHHH
Q 012594 422 GIKANALKMKQMARKS 437 (460)
Q Consensus 422 ~~~~~a~~l~~~~~~~ 437 (460)
+++++.+..++++++.
T Consensus 139 ~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 139 SLVEKLNQYESSLIQK 154 (163)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998888864
No 140
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=64.98 E-value=7.4 Score=32.73 Aligned_cols=38 Identities=26% Similarity=0.421 Sum_probs=26.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++++|++. |+.|.+- ..|++.|.++||+|+.++...
T Consensus 1 M~~m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 6666677655 4555444 578999999999999988753
No 141
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=64.81 E-value=38 Score=29.82 Aligned_cols=105 Identities=16% Similarity=0.119 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCcc--chhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEH--MHAKITASMPQKAEQSSLITMVSIPDGLESHEADRR 78 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 78 (460)
+++||+++.++. || -+.+|...-.+- ..+|..+.++. .....++. |+.++.+|.... .
T Consensus 89 ~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~----~-- 150 (286)
T 3n0v_A 89 HRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH---------KIPYYHFALDPK----D-- 150 (286)
T ss_dssp CCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECCCBTT----B--
T ss_pred CCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeCCCcC----C--
Confidence 457998888766 43 344454444321 36887776543 34444444 888888874221 0
Q ss_pred cHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 79 DLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
+ ......+.+.++. .++|+||.-.+.. -...+-+.+.-.++-++++.
T Consensus 151 ------r---~~~~~~~~~~l~~-------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSl 198 (286)
T 3n0v_A 151 ------K---PGQERKVLQVIEE-------TGAELVILARYMQVLSPELCRRLDGWAINIHHSL 198 (286)
T ss_dssp ------H---HHHHHHHHHHHHH-------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEECS
T ss_pred ------H---HHHHHHHHHHHHh-------cCCCEEEecccccccCHHHHhhhcCCeEEecccc
Confidence 0 0111223344444 7899999877644 55666677777788777664
No 142
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=64.48 E-value=9.1 Score=32.51 Aligned_cols=39 Identities=15% Similarity=0.231 Sum_probs=35.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+.+|++..-|+-|-..-++.+|..|+++|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 457888888999999999999999999999999888765
No 143
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=64.09 E-value=30 Score=32.63 Aligned_cols=39 Identities=26% Similarity=0.278 Sum_probs=33.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeCccch
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEH-GIKVTFVSTEHMH 44 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~r-Gh~V~~~~~~~~~ 44 (460)
.|+++..++.|-..-...||..|+++ |++|.++..+.+.
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 35566667999999999999999999 9999999888654
No 144
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=63.96 E-value=55 Score=28.91 Aligned_cols=105 Identities=11% Similarity=0.097 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCcc--chhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEH--MHAKITASMPQKAEQSSLITMVSIPDGLESHEADRR 78 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 78 (460)
+++||+++.++. || -+.+|...-.+- ..+|..+.++. .....++. |+.++.+|.... .
T Consensus 94 ~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~----~-- 155 (292)
T 3lou_A 94 ARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH---------GLPFRHFPITAD----T-- 155 (292)
T ss_dssp SCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECCCCSS----C--
T ss_pred CCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeCCCcC----C--
Confidence 456998888665 44 344555544432 36887776543 33444454 888888875321 0
Q ss_pred cHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 79 DLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
+ ......+.+.++. .++|+||.-.+.- -...+-+.+.-.++-++++.
T Consensus 156 ------r---~~~~~~~~~~l~~-------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSl 203 (292)
T 3lou_A 156 ------K---AQQEAQWLDVFET-------SGAELVILARYMQVLSPEASARLANRAINIHHSF 203 (292)
T ss_dssp ------H---HHHHHHHHHHHHH-------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEEC
T ss_pred ------H---HHHHHHHHHHHHH-------hCCCEEEecCchhhCCHHHHhhhcCCeEEeCCCc
Confidence 0 0111223344444 7899999876643 55666677777788777664
No 145
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=63.83 E-value=8.1 Score=34.23 Aligned_cols=34 Identities=32% Similarity=0.395 Sum_probs=25.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|||++. |+.|.+- .+|++.|.++||+|+.++..+
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCC
Confidence 466543 5666654 468899999999999998643
No 146
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=63.67 E-value=5.9 Score=31.10 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 457888843 5444 68899999999999999874
No 147
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=63.56 E-value=24 Score=34.32 Aligned_cols=25 Identities=16% Similarity=0.060 Sum_probs=20.8
Q ss_pred CCccEEEeCCCcchHHHHHHHhCCceEE
Q 012594 109 EKISCVIADLTVGWALEVAEQMGIARAA 136 (460)
Q Consensus 109 ~~~D~vv~D~~~~~~~~~A~~lgiP~v~ 136 (460)
.+||+++... ....+|+++|||++-
T Consensus 455 ~~pDl~ig~~---~~~~~a~k~gIP~~~ 479 (533)
T 1mio_A 455 LKPDMFFAGI---KEKFVIQKGGVLSKQ 479 (533)
T ss_dssp HCCSEEEECH---HHHHHHHHTTCEEEE
T ss_pred cCCCEEEccc---chhHHHHhcCCCEEE
Confidence 7899999763 457889999999984
No 148
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=63.20 E-value=57 Score=26.12 Aligned_cols=138 Identities=11% Similarity=0.111 Sum_probs=77.6
Q ss_pred cEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccce
Q 012594 273 SVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACF 352 (460)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~ 352 (460)
|.|-|-+||. .+....++....++..+..+-..+.+. ...|+.+. .|+-.. ....++.+
T Consensus 8 ~~V~IimgS~--SD~~v~~~a~~~L~~~gi~~ev~V~Sa------HR~p~~~~----------~~~~~a---~~~g~~Vi 66 (174)
T 3lp6_A 8 PRVGVIMGSD--SDWPVMADAAAALAEFDIPAEVRVVSA------HRTPEAMF----------SYARGA---AARGLEVI 66 (174)
T ss_dssp CSEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHH----------HHHHHH---HHHTCCEE
T ss_pred CeEEEEECcH--HhHHHHHHHHHHHHHcCCCEEEEEECC------CCCHHHHH----------HHHHHH---HhCCCCEE
Confidence 3566667773 367778888888999998875555433 23444432 111100 00113337
Q ss_pred eeccChh----hhhHhhhcCCceeeccccchhh--hhH----HHHHhhhcceeEe-ecCCCCccCHHHHHHHHHHHhcCh
Q 012594 353 LSHCGWN----STLEGLSMGVPFLCWPYFADQY--QNR----NYIFDAWKIGLRF-FPDENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 353 I~hgG~~----sv~eal~~GvP~i~~P~~~dQ~--~~a----~~v~~~lg~g~~~-~~~~~~~~~~~~l~~~i~~~l~~~ 421 (460)
|.-.|.. ++..++ .-+|+|.+|...-.. ..+ -..- . |+.+.. .. ++..++..++..|.. +.|+
T Consensus 67 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp-~-GvpVatV~I--~~~~nAa~lAa~Il~-~~d~ 140 (174)
T 3lp6_A 67 IAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMP-A-GVPVATVSI--GGAGNAGLLAVRMLG-AANP 140 (174)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCC-T-TCCCEECCT--TCHHHHHHHHHHHHH-TTCH
T ss_pred EEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCC-C-CCeeEEEEc--CcchHHHHHHHHHHh-CCCH
Confidence 7766643 444443 668999999763211 111 1111 1 432222 12 244566666666644 4588
Q ss_pred HHHHHHHHHHHHHHHH
Q 012594 422 GIKANALKMKQMARKS 437 (460)
Q Consensus 422 ~~~~~a~~l~~~~~~~ 437 (460)
+++++.+..+++.++.
T Consensus 141 ~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 141 QLRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998888863
No 149
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=62.52 E-value=16 Score=34.68 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=34.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHA 45 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~ 45 (460)
=+++...|+.|-..-.+.+|...+.+|..|.+++.+...+
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ 238 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKK 238 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTT
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHH
Confidence 4677778999999999999999998999999999876443
No 150
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=62.22 E-value=12 Score=33.56 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=31.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~ 50 (460)
+||+|+-.|+.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 4899998888884 56889999999999998876 4666665
No 151
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=61.99 E-value=20 Score=32.14 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC-C-CEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEH-G-IKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~r-G-h~V~~~~~~~ 42 (460)
++||+++..+.. .+|++.|++. | ++|.++....
T Consensus 4 ~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 4 KPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp CCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred cceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 468999865554 4789999876 7 8888886644
No 152
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=61.95 E-value=45 Score=29.78 Aligned_cols=80 Identities=11% Similarity=0.045 Sum_probs=54.5
Q ss_pred CCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCc
Q 012594 32 GIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKI 111 (460)
Q Consensus 32 Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 111 (460)
..+..+++++.+.-+.+.+ |++...+...-+..+ .....+.++++.+++ .+.
T Consensus 189 ~~~~~v~~H~af~Yfa~~y---------Gl~~~~~~~~~~~~e---------------ps~~~l~~l~~~ik~----~~v 240 (312)
T 2o1e_A 189 EKKEFITQHTAFGYLAKEY---------GLKQVPIAGLSPDQE---------------PSAASLAKLKTYAKE----HNV 240 (312)
T ss_dssp SCCEEEESSCTTHHHHHHT---------TCEEEECSSCCSSSC---------------CCHHHHHHHHHHTTS----SCC
T ss_pred CCCEEEEECCchHHHHHHC---------CCeEEEeeccCCCCC---------------CCHHHHHHHHHHHHH----cCC
Confidence 4455666777777777776 888776643222222 122446677777777 889
Q ss_pred cEEEeCCCcc--hHHHHHHHhCCceEEEcc
Q 012594 112 SCVIADLTVG--WALEVAEQMGIARAAVIP 139 (460)
Q Consensus 112 D~vv~D~~~~--~~~~~A~~lgiP~v~~~~ 139 (460)
.+|+++.... .+..+|+..|++.+.+.+
T Consensus 241 ~~If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 241 KVIYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp CEEECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred CEEEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 9999998666 567789999999886543
No 153
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=61.53 E-value=31 Score=32.89 Aligned_cols=85 Identities=15% Similarity=0.159 Sum_probs=51.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHH
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVR 84 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 84 (460)
.|++++.. -.-.+.+++-|.+-|.+|+.+.+....+...+. .. ......++.
T Consensus 314 krv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~---------~~-----------~~v~~~D~~--- 365 (458)
T 3pdi_B 314 ARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDS---------PL-----------PSVRVGDLE--- 365 (458)
T ss_dssp CEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTT---------TS-----------SCEEESHHH---
T ss_pred CEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhC---------cc-----------CcEEeCCHH---
Confidence 47777542 244567888888889998888765422211111 00 000111111
Q ss_pred HHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEE
Q 012594 85 QSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAA 136 (460)
Q Consensus 85 ~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~ 136 (460)
.++++++. .+||++|.+. ....+|+++|||++.
T Consensus 366 ---------~le~~i~~-------~~pDllig~~---~~~~~a~k~gip~~~ 398 (458)
T 3pdi_B 366 ---------DLEHAARA-------GQAQLVIGNS---HALASARRLGVPLLR 398 (458)
T ss_dssp ---------HHHHHHHH-------HTCSEEEECT---THHHHHHHTTCCEEE
T ss_pred ---------HHHHHHHh-------cCCCEEEECh---hHHHHHHHcCCCEEE
Confidence 14455555 7899999874 356789999999995
No 154
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=61.39 E-value=7.9 Score=35.17 Aligned_cols=42 Identities=12% Similarity=0.169 Sum_probs=32.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~ 50 (460)
.+||+|+-.|+.| ..+|..|+++||+|+++..+...+.+.+.
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~~ 44 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQTA 44 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHHT
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHHC
Confidence 4689999887776 45788999999999999886555555555
No 155
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=61.02 E-value=68 Score=31.11 Aligned_cols=32 Identities=13% Similarity=0.087 Sum_probs=21.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.||+++. .-.-.+.|++.|.+-|-+|+.+.+.
T Consensus 365 KrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 365 KRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp CEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 4677762 3344567777788888888877554
No 156
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=60.65 E-value=11 Score=29.00 Aligned_cols=35 Identities=9% Similarity=0.187 Sum_probs=27.3
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-------CCceEEEcccchH
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-------GIARAAVIPYAPA 143 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~~~ 143 (460)
.+||+||.|...+ .|..+++.+ .+|+|.++.....
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~ 99 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKR 99 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCH
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCH
Confidence 7899999999887 677777654 5899988776544
No 157
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=60.27 E-value=9.1 Score=34.50 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=32.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~ 50 (460)
++||+|+-.|+.| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 5689999888777 56788999999999999544455666655
No 158
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=60.23 E-value=41 Score=29.41 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=26.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 9 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 9 GKTMFISGGSRG---IGLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 377888866654 33578999999999999987654
No 159
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=59.97 E-value=14 Score=27.19 Aligned_cols=35 Identities=6% Similarity=0.041 Sum_probs=25.3
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-------CCceEEEcccchH
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-------GIARAAVIPYAPA 143 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~~~ 143 (460)
.+||+||.|...+ .+..+++.+ ++|++.++.....
T Consensus 45 ~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~ 88 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGE 88 (122)
T ss_dssp BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSH
T ss_pred cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCch
Confidence 7899999998665 456666544 5899988765443
No 160
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=59.55 E-value=25 Score=29.57 Aligned_cols=105 Identities=14% Similarity=0.089 Sum_probs=58.3
Q ss_pred EEEEEcCCCccChHH----HHHHHHHHHhC-CCEEEEEeCccc-hhHHhhccCccccCCCCeE-EEEcCCC-CCCCCcCc
Q 012594 6 HVLVIPFPAQGHAGP----LMKLSTKIAEH-GIKVTFVSTEHM-HAKITASMPQKAEQSSLIT-MVSIPDG-LESHEADR 77 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p----~~~La~~L~~r-Gh~V~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~i~~~-~~~~~~~~ 77 (460)
.|+++.-...|.+.| ++..|+.|++. |-+|+.++.... .+.+++... -|.+ .+.+... +...
T Consensus 5 ~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~------~Gad~v~~v~~~~~~~~---- 74 (217)
T 3ih5_A 5 NLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP------YGVDKLHVFDAEGLYPY---- 74 (217)
T ss_dssp CEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG------GTCSEEEEEECGGGSSC----
T ss_pred cEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh------cCCCEEEEecCcccccC----
Confidence 688888666676665 46778888764 777777654432 222222210 0222 2222211 1100
Q ss_pred ccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc---hHHHHHHHhCCceEE
Q 012594 78 RDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG---WALEVAEQMGIARAA 136 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~---~~~~~A~~lgiP~v~ 136 (460)
+. . .....+.++++. .+||+|++-.... .+..+|.+|++|.+.
T Consensus 75 -~~----~----~~a~~l~~~i~~-------~~p~~Vl~g~t~~G~~laprlAa~L~~~~~s 120 (217)
T 3ih5_A 75 -TS----L----PHTSILVNLFKE-------EQPQICLMGATVIGRDLGPRVSSALTSGLTA 120 (217)
T ss_dssp -CH----H----HHHHHHHHHHHH-------HCCSEEEEECSHHHHHHHHHHHHHTTCCCBC
T ss_pred -CH----H----HHHHHHHHHHHh-------cCCCEEEEeCCcchhhHHHHHHHHhCCCccc
Confidence 00 1 112334455555 6799999887554 456789999999985
No 161
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=59.49 E-value=51 Score=28.44 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=27.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
-|+++++.++.| =-.++|+.|+++|.+|.+....
T Consensus 9 gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~~ 42 (255)
T 4g81_D 9 GKTALVTGSARG---LGFAYAEGLAAAGARVILNDIR 42 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCSC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 489999987765 3468899999999999886543
No 162
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=58.77 E-value=11 Score=33.51 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=26.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|.+++||.|+-.|..|. .+++.|.+.||+|+++..
T Consensus 1 M~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp ---CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 77778999998777774 467888899999987654
No 163
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=58.75 E-value=16 Score=30.96 Aligned_cols=30 Identities=10% Similarity=0.110 Sum_probs=25.0
Q ss_pred cccceeeccChhhhhHhhhcCCceeeccccc
Q 012594 348 SVACFLSHCGWNSTLEGLSMGVPFLCWPYFA 378 (460)
Q Consensus 348 ~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~ 378 (460)
.++++|+.||.......- .++|+|-++...
T Consensus 63 ~~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 63 RCDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 355699999999998875 689999999864
No 164
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=58.50 E-value=55 Score=28.13 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=26.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCh
Confidence 67778866543 34688999999999999987654
No 165
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=58.13 E-value=19 Score=29.17 Aligned_cols=41 Identities=15% Similarity=0.103 Sum_probs=27.9
Q ss_pred CCCCCEEEEEcCC-CccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFP-AQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~-~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|++..|++++-.. ++ .-.=+..-.+.|.+.|++|++++...
T Consensus 4 m~~t~~~v~il~~~gF-e~~E~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNF-QDEEYFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEE-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cccCCCEEEEECCCCc-cHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 7777777665543 33 23335666788899999999998754
No 166
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=58.08 E-value=42 Score=31.82 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=24.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
||+++.. |. -...+++++++.|++|+++.+...
T Consensus 8 ~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~~~ 40 (461)
T 2dzd_A 8 KVLVANR---GE--IAIRVFRACTELGIRTVAIYSKED 40 (461)
T ss_dssp EEEECSC---HH--HHHHHHHHHHHHTCEEEEEECGGG
T ss_pred EEEEECC---cH--HHHHHHHHHHHcCCEEEEEECCcc
Confidence 7888743 32 256789999999999999876543
No 167
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=57.91 E-value=14 Score=33.28 Aligned_cols=40 Identities=28% Similarity=0.265 Sum_probs=32.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~ 50 (460)
+||+|+-.|+.| ..+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 489999888777 457888999999999999876 3666665
No 168
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=57.33 E-value=22 Score=30.86 Aligned_cols=40 Identities=10% Similarity=0.028 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHH--------HHhC-CCEEEEEeCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTK--------IAEH-GIKVTFVSTEH 42 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~--------L~~r-Gh~V~~~~~~~ 42 (460)
++.+|++.+.++-.|-....-++.. |..+ |++|.++...-
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~v 167 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQV 167 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSB
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCC
Confidence 4568999999999999999999877 9999 99999987754
No 169
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=57.17 E-value=25 Score=30.20 Aligned_cols=38 Identities=13% Similarity=0.111 Sum_probs=28.7
Q ss_pred CCEEEEEcCCCc-----------cChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQ-----------GHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~-----------gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+.||+++..... -+..=+..-...|.+.|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 358998876632 12455777788999999999999974
No 170
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=57.00 E-value=35 Score=26.39 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=57.8
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHHHHH
Q 012594 8 LVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVRQSM 87 (460)
Q Consensus 8 l~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 87 (460)
+|++... .+=.-++.+|+.|.+.|+++ +++....+.+++. |+....+......+ .
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i--~AT~GTa~~L~~~---------Gi~v~~v~k~~egg---~---------- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKL--FATEATSDWLNAN---------NVPATPVAWPSQEG---Q---------- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEE--EEEHHHHHHHHHT---------TCCCEEECCGGGC---------------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEE--EECchHHHHHHHc---------CCeEEEEEeccCCC---c----------
Confidence 4444332 34566889999999999974 4455677788776 67666654321110 0
Q ss_pred HhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc--------hHHHHHHHhCCceEE
Q 012594 88 LTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG--------WALEVAEQMGIARAA 136 (460)
Q Consensus 88 ~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~--------~~~~~A~~lgiP~v~ 136 (460)
...-+.+.++++. .+.|+||--.... .-...|-.++||++.
T Consensus 82 -~~~~~~i~d~i~~-------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 82 -NPSLSSIRKLIRD-------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp ----CBCHHHHHHT-------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred -ccccccHHHHHHC-------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 0000224445555 8999999755331 234467888999984
No 171
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=56.60 E-value=45 Score=29.38 Aligned_cols=108 Identities=8% Similarity=0.029 Sum_probs=59.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccH
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDL 80 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 80 (460)
+++||+++.++. || -+.+|.+.-.+- ..+|..+.++.-.. +.+. ....|+.++.+|.... .
T Consensus 87 ~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~-----A~~~gIp~~~~~~~~~----~---- 149 (287)
T 3nrb_A 87 DRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSV-----SLVGDIPFHYLPVTPA----T---- 149 (287)
T ss_dssp CCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCC-----CCCTTSCEEECCCCGG----G----
T ss_pred CCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHH-----HHHcCCCEEEEeccCc----c----
Confidence 467998888666 43 334555554432 35777776643221 2111 1223788877764210 0
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
+ ..... ++++.+++ .++|+||.-.+.- -...+-+.+.-.++-++++.
T Consensus 150 ----r---~~~~~---~~~~~l~~----~~~Dlivlagym~il~~~~l~~~~~~~iNiHpSl 197 (287)
T 3nrb_A 150 ----K---AAQES---QIKNIVTQ----SQADLIVLARYMQILSDDLSAFLSGRCINIHHSF 197 (287)
T ss_dssp ----H---HHHHH---HHHHHHHH----HTCSEEEESSCCSCCCHHHHHHHTTSEEEEESSC
T ss_pred ----h---hhHHH---HHHHHHHH----hCCCEEEhhhhhhhcCHHHHhhccCCeEEECccc
Confidence 0 01112 33344444 7899999877654 55666677777788777664
No 172
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=56.57 E-value=72 Score=26.87 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+.|+++++.++.| + -.++++.|+++|++|.++....
T Consensus 4 ~~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~r~~ 39 (247)
T 3lyl_A 4 NEKVALVTGASRG-I--GFEVAHALASKGATVVGTATSQ 39 (247)
T ss_dssp TTCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCCH
Confidence 3467788865542 2 3588999999999998887653
No 173
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=56.29 E-value=14 Score=37.17 Aligned_cols=96 Identities=7% Similarity=-0.003 Sum_probs=55.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc-----------hhHHhhccCccccCCCCeEEEEcCCCCCCC
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM-----------HAKITASMPQKAEQSSLITMVSIPDGLESH 73 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 73 (460)
+||+|+..|..| ....+.|.++||+|..+.+.+. .+..++. ++.++.... .
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~---------~ip~~~~~~-~--- 62 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER---------GIPVYAPDN-V--- 62 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC--------CCHHHHHHHH---------TCCEECCSC-T---
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHHc---------CCCEeccCC-C---
Confidence 478888755433 2335667778999988876542 2233333 566543221 0
Q ss_pred CcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccch
Q 012594 74 EADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYAP 142 (460)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~~ 142 (460)
. + + ++++.+++ .+||+||+-.+.. -...+-+.....++-++++..
T Consensus 63 --~--~-------------~---~~~~~l~~----~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~slL 108 (660)
T 1z7e_A 63 --N--H-------------P---LWVERIAQ----LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLL 108 (660)
T ss_dssp --T--S-------------H---HHHHHHHH----HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSST
T ss_pred --C--c-------------H---HHHHHHHh----cCCCEEEEcCcccccCHHHHhcCCCCeEEecCCcC
Confidence 0 0 1 23344444 7899999876533 444555556667888887754
No 174
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=56.10 E-value=6.7 Score=35.21 Aligned_cols=28 Identities=18% Similarity=0.183 Sum_probs=23.5
Q ss_pred ccceeeccChhhhhHhhhc----CCceeeccc
Q 012594 349 VACFLSHCGWNSTLEGLSM----GVPFLCWPY 376 (460)
Q Consensus 349 ~~~~I~hgG~~sv~eal~~----GvP~i~~P~ 376 (460)
++++|.-||-||+++++.. ++|++.++.
T Consensus 76 ~d~vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 76 CELVLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4559999999999999754 899999864
No 175
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=55.84 E-value=76 Score=27.29 Aligned_cols=32 Identities=22% Similarity=0.122 Sum_probs=25.6
Q ss_pred CCccEEEeCCCcc------hHHHHHHHhCCceEEEccc
Q 012594 109 EKISCVIADLTVG------WALEVAEQMGIARAAVIPY 140 (460)
Q Consensus 109 ~~~D~vv~D~~~~------~~~~~A~~lgiP~v~~~~~ 140 (460)
..||+||+..... .+..+|..||+|.+.....
T Consensus 112 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 112 EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 5699999876552 6889999999999976543
No 176
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=55.76 E-value=35 Score=32.24 Aligned_cols=33 Identities=21% Similarity=0.173 Sum_probs=24.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
||+++..+. -...+++.+++.|++|+++.+...
T Consensus 8 kiLI~g~g~-----~a~~i~~aa~~~G~~~v~v~~~~~ 40 (446)
T 3ouz_A 8 SILIANRGE-----IALRALRTIKEMGKKAICVYSEAD 40 (446)
T ss_dssp EEEECCCHH-----HHHHHHHHHHHTTCEEEEEEEGGG
T ss_pred eEEEECCCH-----HHHHHHHHHHHcCCEEEEEEcCcc
Confidence 788854332 456899999999999998865543
No 177
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=55.27 E-value=43 Score=29.57 Aligned_cols=104 Identities=12% Similarity=0.125 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCC---CEEEEEeCcc---chhHHhhccCccccCCCCeEEEEcCCCCCCCCcC
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHG---IKVTFVSTEH---MHAKITASMPQKAEQSSLITMVSIPDGLESHEAD 76 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rG---h~V~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 76 (460)
+++||+++.++. || -+.+|...-. .| .+|.++.++. ..+..++ .|+.++.+|.... .
T Consensus 88 ~~~ri~vl~Sg~-g~--nl~~ll~~~~-~g~l~~~i~~Visn~p~~~~~~A~~---------~gIp~~~~~~~~~--~-- 150 (288)
T 3obi_A 88 TRRKVMLLVSQS-DH--CLADILYRWR-VGDLHMIPTAIVSNHPRETFSGFDF---------GDIPFYHFPVNKD--T-- 150 (288)
T ss_dssp SCEEEEEEECSC-CH--HHHHHHHHHH-TTSSCEEEEEEEESSCGGGSCCTTT---------TTCCEEECCCCTT--T--
T ss_pred CCcEEEEEEcCC-CC--CHHHHHHHHH-CCCCCeEEEEEEcCCChhHHHHHHH---------cCCCEEEeCCCcc--c--
Confidence 456898888665 44 2334444443 34 4777666543 2222223 3888888774321 0
Q ss_pred cccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 77 RRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
+ ......+.+.++. .++|+||.-.+.- -...+-+.+.-.++-++++.
T Consensus 151 --------r---~~~~~~~~~~l~~-------~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpSl 198 (288)
T 3obi_A 151 --------R---RQQEAAITALIAQ-------THTDLVVLARYMQILSDEMSARLAGRCINIHHSF 198 (288)
T ss_dssp --------H---HHHHHHHHHHHHH-------HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEEC
T ss_pred --------H---HHHHHHHHHHHHh-------cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCccc
Confidence 0 0111223344444 7899999876644 55666677776788777663
No 178
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=55.27 E-value=57 Score=31.63 Aligned_cols=25 Identities=4% Similarity=0.088 Sum_probs=20.5
Q ss_pred CCccEEEeCCCcchHHHHHHHh-------CCceEE
Q 012594 109 EKISCVIADLTVGWALEVAEQM-------GIARAA 136 (460)
Q Consensus 109 ~~~D~vv~D~~~~~~~~~A~~l-------giP~v~ 136 (460)
.+||++|.+. .+..+|+++ |||++.
T Consensus 433 ~~pDLiig~~---~~~~~a~~~~~~g~~~gip~v~ 464 (519)
T 1qgu_B 433 RQPDFMIGNS---YGKFIQRDTLAKGKAFEVPLIR 464 (519)
T ss_dssp HCCSEEEECG---GGHHHHHHHHHHCGGGCCCEEE
T ss_pred cCCCEEEECc---chHHHHHHhhcccccCCCCeEE
Confidence 6799999885 357778888 999985
No 179
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=54.98 E-value=17 Score=31.01 Aligned_cols=26 Identities=19% Similarity=0.368 Sum_probs=21.1
Q ss_pred ccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 15 QGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 15 ~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|. .-.+||++|+++|++|++++.+.
T Consensus 28 SG~--mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGH--LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCH--HHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCH--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 554 34678999999999999998864
No 180
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=54.70 E-value=22 Score=29.08 Aligned_cols=64 Identities=11% Similarity=0.080 Sum_probs=41.3
Q ss_pred hhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcCh-------HHHHHHHHHHHHHHH----HhhcCCChHHHHHH
Q 012594 382 QNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDG-------GIKANALKMKQMARK----SLVEGGSSFRNFES 450 (460)
Q Consensus 382 ~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~-------~~~~~a~~l~~~~~~----~~~~~g~~~~~~~~ 450 (460)
+.+..-++ .|||+.+ |+|++.+++.+.++.. .|+ |.-.+-..+|+ .|+.+-.....++.
T Consensus 103 d~~~Fe~~-cGVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~ 172 (187)
T 3tl4_X 103 TKMGMNEN-SGVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQ 172 (187)
T ss_dssp CHHHHHHT-TTTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHH
T ss_pred CHHHHHHH-CCCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHH
Confidence 33333344 7999998 7999999999999532 466 66666666664 24455555556655
Q ss_pred HHHHH
Q 012594 451 FVSQL 455 (460)
Q Consensus 451 ~~~~l 455 (460)
-+-.+
T Consensus 173 ~~l~l 177 (187)
T 3tl4_X 173 EVLKL 177 (187)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44444
No 181
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=54.42 E-value=44 Score=28.69 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=26.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|.++++.++.| =-.++|+.|+++|.+|.+....
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 68888877765 3468899999999999988664
No 182
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=54.25 E-value=19 Score=24.26 Aligned_cols=50 Identities=16% Similarity=0.264 Sum_probs=33.1
Q ss_pred hcCCceeeccccchhhhhHHHHHhhh--cceeEeecCCCCccCHHHHHHHHHHHhc
Q 012594 366 SMGVPFLCWPYFADQYQNRNYIFDAW--KIGLRFFPDENGIITRQEIQRQVKALLN 419 (460)
Q Consensus 366 ~~GvP~i~~P~~~dQ~~~a~~v~~~l--g~g~~~~~~~~~~~~~~~l~~~i~~~l~ 419 (460)
-.|+|++++-....|-+.-..-.++. |+..-+. +..++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvl----kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL----KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE----ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhh----ccCCHHHHHHHHHHHHH
Confidence 46899999887777665443322222 5555554 45678999988888774
No 183
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=54.17 E-value=23 Score=33.85 Aligned_cols=48 Identities=10% Similarity=0.220 Sum_probs=35.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcC
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIP 67 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 67 (460)
+++++.. ++=.-+..+|+.|.+.|.++. +|....+.+++. |+.+..+.
T Consensus 25 ~raLISV----~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~ 72 (534)
T 4ehi_A 25 MRALLSV----SDKEGIVEFGKELENLGFEIL--STGGTFKLLKEN---------GIKVIEVS 72 (534)
T ss_dssp CEEEEEE----SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEECB
T ss_pred cEEEEEE----cccccHHHHHHHHHHCCCEEE--EccHHHHHHHHC---------CCceeehh
Confidence 3555544 344558899999999998875 687888999888 67666654
No 184
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=53.68 E-value=50 Score=28.21 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=21.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVS 39 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~ 39 (460)
.+|+++...----..-+-.....++++|++|++++
T Consensus 4 ~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 4 LHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp CSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEE
Confidence 45655443333334445555566778999988885
No 185
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=53.63 E-value=9 Score=29.41 Aligned_cols=34 Identities=24% Similarity=0.180 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+.||+++-. |.+ -..+++.|.++||+|+++....
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 347888764 433 3578999999999999987644
No 186
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=52.81 E-value=86 Score=24.95 Aligned_cols=141 Identities=17% Similarity=0.232 Sum_probs=76.9
Q ss_pred cEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccce
Q 012594 273 SVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACF 352 (460)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~ 352 (460)
|.|-|-+||. .+....++....++..+..+-..+.+. ...|+.+. .|+... ....++.+
T Consensus 7 ~~V~IimgS~--SD~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~----------~~~~~a---~~~g~~Vi 65 (169)
T 3trh_A 7 IFVAILMGSD--SDLSTMETAFTELKSLGIPFEAHILSA------HRTPKETV----------EFVENA---DNRGCAVF 65 (169)
T ss_dssp CEEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHH----------HHHHHH---HHTTEEEE
T ss_pred CcEEEEECcH--HhHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHH----------HHHHHH---HhCCCcEE
Confidence 4677777873 367778888889999998876555433 23444422 111110 00123447
Q ss_pred eeccChh----hhhHhhhcCCceeeccccchhh-hhHHHH--Hh--hhcceeEe-ecCCCCccCHHHHHHHHHHHhcChH
Q 012594 353 LSHCGWN----STLEGLSMGVPFLCWPYFADQY-QNRNYI--FD--AWKIGLRF-FPDENGIITRQEIQRQVKALLNDGG 422 (460)
Q Consensus 353 I~hgG~~----sv~eal~~GvP~i~~P~~~dQ~-~~a~~v--~~--~lg~g~~~-~~~~~~~~~~~~l~~~i~~~l~~~~ 422 (460)
|.-.|.. ++..+ ..-+|+|.+|...-.. .....+ .. . |+.+.. ..++.+..++.-++..|.. +.|++
T Consensus 66 Ia~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~~ 142 (169)
T 3trh_A 66 IAAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQIIA-LQDKS 142 (169)
T ss_dssp EEEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHHH-TTCHH
T ss_pred EEECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHHc-CCCHH
Confidence 7776643 33333 3468999999863211 111111 11 1 443222 1110022355555555533 45889
Q ss_pred HHHHHHHHHHHHHHH
Q 012594 423 IKANALKMKQMARKS 437 (460)
Q Consensus 423 ~~~~a~~l~~~~~~~ 437 (460)
++++.+..+++.++.
T Consensus 143 l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 143 IAQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998888864
No 187
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=52.75 E-value=99 Score=27.17 Aligned_cols=80 Identities=13% Similarity=0.130 Sum_probs=54.7
Q ss_pred CEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCcc
Q 012594 33 IKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKIS 112 (460)
Q Consensus 33 h~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D 112 (460)
.+..+++.+.+.-+.+.+ |++...+... . . ......+.++++.+++ .+..
T Consensus 190 ~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~-~-~---------------eps~~~l~~l~~~ik~----~~v~ 239 (291)
T 1pq4_A 190 QRKFIVFHPSWAYFARDY---------NLVQIPIEVE-G-Q---------------EPSAQELKQLIDTAKE----NNLT 239 (291)
T ss_dssp CCEEEESSCCCHHHHHHT---------TCEEEESCBT-T-B---------------CCCHHHHHHHHHHHHT----TTCC
T ss_pred CCEEEEECCchHHHHHHC---------CCEEeecccC-C-C---------------CCCHHHHHHHHHHHHH----cCCC
Confidence 455566677777777666 7887766431 1 1 1123446667777777 8899
Q ss_pred EEEeCCCcc--hHHHHHHHhCCceEEEcccch
Q 012594 113 CVIADLTVG--WALEVAEQMGIARAAVIPYAP 142 (460)
Q Consensus 113 ~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~ 142 (460)
+|+++.... .+..+|+..|++.+.+.+...
T Consensus 240 ~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~~ 271 (291)
T 1pq4_A 240 MVFGETQFSTKSSEAIAAEIGAGVELLDPLAA 271 (291)
T ss_dssp EEEEETTSCCHHHHHHHHHHTCEEEEECTTCS
T ss_pred EEEEeCCCChHHHHHHHHHcCCeEEEEcCchh
Confidence 999998666 567789999999988765543
No 188
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=52.44 E-value=13 Score=28.15 Aligned_cols=33 Identities=15% Similarity=0.457 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.+||+++-. |.+- ..+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 468888843 5553 35789999999999998764
No 189
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=52.43 E-value=13 Score=32.84 Aligned_cols=36 Identities=25% Similarity=0.257 Sum_probs=28.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|++..||.|+-.|..| ..+|..|+++||+|++....
T Consensus 1 Mm~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 1 MTGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CCSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 6666799999776666 46889999999999997543
No 190
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=52.23 E-value=15 Score=30.23 Aligned_cols=40 Identities=23% Similarity=0.369 Sum_probs=27.3
Q ss_pred CCCCCEEEEEcCCCccChHHHH-HHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLM-KLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~-~La~~L~~rGh~V~~~~~~ 41 (460)
|.+++||+++... .|+..-+. .+++.|.+.|++|.++.-.
T Consensus 1 M~~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp --CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCCCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 6666799888777 77766544 3566676789999887543
No 191
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=52.21 E-value=21 Score=30.00 Aligned_cols=38 Identities=11% Similarity=0.127 Sum_probs=25.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|..+.|.++++.++ |-+ -.++++.|+++||+|+++...
T Consensus 1 M~~~~k~vlVtGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAVLITGAS-RGI--GEATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp ---CCCEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEECC
Confidence 54445677777544 433 367899999999999988764
No 192
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=52.21 E-value=54 Score=25.01 Aligned_cols=63 Identities=5% Similarity=-0.067 Sum_probs=39.7
Q ss_pred hcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 012594 366 SMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMA 434 (460)
Q Consensus 366 ~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~ 434 (460)
...+|+|++--..+... .....+ .|+--.+. +.++.+.|.++|+.++....++...+++.+.+
T Consensus 73 ~~~~pii~ls~~~~~~~-~~~~~~-~g~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~ 135 (155)
T 1qkk_A 73 DPDLPMILVTGHGDIPM-AVQAIQ-DGAYDFIA----KPFAADRLVQSARRAEEKRRLVMENRSLRRAA 135 (155)
T ss_dssp CTTSCEEEEECGGGHHH-HHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHH-HHHHHh-cCCCeEEe----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789988865554433 333444 37755554 56899999999999997555444444443333
No 193
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=52.20 E-value=14 Score=30.49 Aligned_cols=37 Identities=8% Similarity=0.045 Sum_probs=28.2
Q ss_pred CcccceeeccChhhhhHhhhcCCceeeccccchhhhhH
Q 012594 347 PSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNR 384 (460)
Q Consensus 347 ~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a 384 (460)
..++++|+.||.......- .++|+|-++...--...|
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~a 86 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRA 86 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHH
Confidence 4556699999999998875 689999999875333333
No 194
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=51.79 E-value=58 Score=31.41 Aligned_cols=39 Identities=13% Similarity=0.294 Sum_probs=34.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
.|+|+..++.|-..=+..||..|+++|++|.+++.+.+.
T Consensus 103 vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 103 VIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 567777789999999999999999999999999886543
No 195
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=51.51 E-value=57 Score=27.46 Aligned_cols=42 Identities=21% Similarity=0.143 Sum_probs=32.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHH-HhCCCEEEEEeCccchhHH
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKI-AEHGIKVTFVSTEHMHAKI 47 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L-~~rGh~V~~~~~~~~~~~~ 47 (460)
-+++...|+.|-..-.+.++... .+.|..|.+++.+...+.+
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~ 74 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDL 74 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHH
Confidence 45677778999999999988764 5568899999987654444
No 196
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=51.19 E-value=10 Score=35.22 Aligned_cols=52 Identities=19% Similarity=0.318 Sum_probs=34.4
Q ss_pred ccceeeccChhhhhHhhhc----CC-ceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcC
Q 012594 349 VACFLSHCGWNSTLEGLSM----GV-PFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLND 420 (460)
Q Consensus 349 ~~~~I~hgG~~sv~eal~~----Gv-P~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 420 (460)
++++|+=||-||++.|+.. ++ |++.+... . + |.. ..++.+.+.+++++++++
T Consensus 115 ~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~-l--GFL------t~~~~~~~~~al~~il~g 171 (388)
T 3afo_A 115 TDLLVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------T-L--GFL------SPFDFKEHKKVFQEVISS 171 (388)
T ss_dssp CSEEEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------S-C--CSS------CCEEGGGHHHHHHHHHTT
T ss_pred CCEEEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------C-c--ccC------CcCChHHHHHHHHHHhcC
Confidence 4559999999999999643 67 78888431 1 1 211 123456777777777754
No 197
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=51.11 E-value=96 Score=25.02 Aligned_cols=141 Identities=11% Similarity=0.119 Sum_probs=81.8
Q ss_pred CcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccc
Q 012594 272 GSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVAC 351 (460)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~ 351 (460)
-|.|-|-+||. .+....++....++..+..+-..+.+. ...|+.+.+ |+.. ...-.++.
T Consensus 13 ~~~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~---a~~~g~~V 71 (183)
T 1o4v_A 13 VPRVGIIMGSD--SDLPVMKQAAEILEEFGIDYEITIVSA------HRTPDRMFE----------YAKN---AEERGIEV 71 (183)
T ss_dssp -CEEEEEESCG--GGHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHH---TTTTTCCE
T ss_pred CCeEEEEeccH--HHHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHH----------HHHH---HHhCCCcE
Confidence 45788888884 367788888888999998875555433 234444321 1111 01112334
Q ss_pred eeeccCh----hhhhHhhhcCCceeeccccch--hhhhH-HHHHhhh--cceeEe-ecCCCCccCHHHHHHHHHHHhcCh
Q 012594 352 FLSHCGW----NSTLEGLSMGVPFLCWPYFAD--QYQNR-NYIFDAW--KIGLRF-FPDENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 352 ~I~hgG~----~sv~eal~~GvP~i~~P~~~d--Q~~~a-~~v~~~l--g~g~~~-~~~~~~~~~~~~l~~~i~~~l~~~ 421 (460)
+|.=.|. .++..++ .-+|+|.+|.... ....+ .-+.. . |+.+.. .. ++..++.-++..|. -+.|+
T Consensus 72 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I--d~~~nAa~lAaqIl-a~~d~ 146 (183)
T 1o4v_A 72 IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI--NNAKNAGILAASIL-GIKYP 146 (183)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT--TCHHHHHHHHHHHH-HTTCH
T ss_pred EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec--CCchHHHHHHHHHH-hcCCH
Confidence 7766664 3444444 6799999998542 11122 11122 3 533222 12 24567777777775 45688
Q ss_pred HHHHHHHHHHHHHHHHh
Q 012594 422 GIKANALKMKQMARKSL 438 (460)
Q Consensus 422 ~~~~~a~~l~~~~~~~~ 438 (460)
+++++.+..++.....+
T Consensus 147 ~l~~kL~~~r~~~~~~v 163 (183)
T 1o4v_A 147 EIARKVKEYKERMKREV 163 (183)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999998888887654
No 198
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=51.10 E-value=18 Score=28.21 Aligned_cols=34 Identities=12% Similarity=0.190 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
..+|+++-.|..| ..+++.|.++|++|+++....
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECCH
Confidence 3588888544333 557899999999999987643
No 199
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=51.08 E-value=24 Score=26.50 Aligned_cols=35 Identities=6% Similarity=0.071 Sum_probs=24.5
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-------CCceEEEcccchH
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-------GIARAAVIPYAPA 143 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~~~ 143 (460)
.+||+||.|...+ .+..+++.+ .+|++.++.....
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~ 90 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDI 90 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCH
Confidence 7899999998665 455554433 5889988765543
No 200
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=51.04 E-value=11 Score=33.79 Aligned_cols=39 Identities=15% Similarity=0.033 Sum_probs=28.6
Q ss_pred CE-EEEEcCCCccChH--------------HHHHHHHHHHhCCCEEEEEeCccc
Q 012594 5 PH-VLVIPFPAQGHAG--------------PLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 5 ~~-Il~~~~~~~gH~~--------------p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
.| |++-++|+.=.+. .-.+||+++.++|++|++++.+..
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 35 6666666654441 556899999999999999987643
No 201
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=50.65 E-value=8.9 Score=35.22 Aligned_cols=54 Identities=15% Similarity=0.193 Sum_probs=35.2
Q ss_pred cccceeeccChhhhhHhhh----cCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcCh
Q 012594 348 SVACFLSHCGWNSTLEGLS----MGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 348 ~~~~~I~hgG~~sv~eal~----~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~ 421 (460)
.++++|+=||-||++.|.. .++|++.+=.. -+|.. -.++.+++.++++++++++
T Consensus 108 ~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGiN~G--------------~LGFL------t~~~~~~~~~~l~~vl~g~ 165 (365)
T 3pfn_A 108 QIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLG--------------SLGFL------TPFSFENFQSQVTQVIEGN 165 (365)
T ss_dssp TCSEEEEESSTTHHHHHHHHCSSSCCCEEEEESS--------------SCTTT------CCEESTTHHHHHHHHHHSC
T ss_pred CCCEEEEEcChHHHHHHHHHhccCCCCEEEEcCC--------------CCccc------eeecHHHHHHHHHHHHcCC
Confidence 3455999999999999966 36898887210 11221 2345566777777777543
No 202
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=50.63 E-value=32 Score=26.19 Aligned_cols=43 Identities=5% Similarity=-0.030 Sum_probs=30.9
Q ss_pred CEEEEEc-CC--CccChHHHHHHHHHHHhCCCEEEEEeCccchhHH
Q 012594 5 PHVLVIP-FP--AQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKI 47 (460)
Q Consensus 5 ~~Il~~~-~~--~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~ 47 (460)
.|++|+. .+ +.......+.+|...++.||+|+++-+..-...+
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLL 61 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHH
Confidence 4666444 44 4566777888899999999999998876544433
No 203
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=50.47 E-value=17 Score=32.27 Aligned_cols=32 Identities=13% Similarity=0.279 Sum_probs=26.7
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVS 39 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~ 39 (460)
|.+ ||.|+-.|..|. ++|+.|.++||+|++.-
T Consensus 4 Ms~--kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 4 MSE--KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CCC--EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CCC--cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 554 899999998884 68999999999999863
No 204
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=50.04 E-value=16 Score=32.85 Aligned_cols=34 Identities=3% Similarity=0.130 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
++||+++..+ ....+++++.++||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 3689998866 467899999999999999887654
No 205
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=50.02 E-value=89 Score=27.57 Aligned_cols=39 Identities=18% Similarity=0.293 Sum_probs=32.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
.|+++..++.|-..-...||..|+.+|++|.++..+.+.
T Consensus 100 vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 100 VIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 345565678999999999999999999999999887543
No 206
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=50.00 E-value=29 Score=29.75 Aligned_cols=38 Identities=21% Similarity=0.343 Sum_probs=28.0
Q ss_pred CCEEEEEcCCCcc-----------ChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQG-----------HAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~g-----------H~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+.||+++.....+ ...=+......|.+.|++|++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589988775322 2244677788899999999999974
No 207
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=49.98 E-value=68 Score=28.49 Aligned_cols=98 Identities=8% Similarity=0.071 Sum_probs=54.3
Q ss_pred CEEEEEcCCCccC----hHHHHHHHHHHHhCCCEEEEE-eCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCccc
Q 012594 5 PHVLVIPFPAQGH----AGPLMKLSTKIAEHGIKVTFV-STEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRD 79 (460)
Q Consensus 5 ~~Il~~~~~~~gH----~~p~~~La~~L~~rGh~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 79 (460)
..|++.|+.+... ..-+.+|++.|.++|++|.+. +++...+..++... ..+++. +.+. .+
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~----~~~~~~---l~g~--------~s 243 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAE----GFAYVE---VLPK--------MS 243 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHT----TCTTEE---ECCC--------CC
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHh----hCCccc---ccCC--------CC
Confidence 3567776543211 225788999998889998886 44433333322210 001221 1110 01
Q ss_pred HHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEEccc
Q 012594 80 LHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAVIPY 140 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~ 140 (460)
+.++...+ .+.|++|+.- .....+|..+|+|.|.++..
T Consensus 244 ---------------l~el~ali------~~a~l~I~~D--SG~~HlAaa~g~P~v~lfg~ 281 (326)
T 2gt1_A 244 ---------------LEGVARVL------AGAKFVVSVD--TGLSHLTAALDRPNITVYGP 281 (326)
T ss_dssp ---------------HHHHHHHH------HTCSEEEEES--SHHHHHHHHTTCCEEEEESS
T ss_pred ---------------HHHHHHHH------HhCCEEEecC--CcHHHHHHHcCCCEEEEECC
Confidence 22333333 2379999763 55677788899999998644
No 208
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=49.83 E-value=9.6 Score=29.35 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.||+++-.|..| ..+++.|.++||+|+++..+.
T Consensus 8 ~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 478888765444 478999999999999998754
No 209
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=49.79 E-value=67 Score=30.26 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=25.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.+ ||+++..+ .-...+++++++.|++|+++.+..
T Consensus 1 m~k--~ilI~g~g-----~~~~~~~~a~~~~G~~vv~v~~~~ 35 (451)
T 1ulz_A 1 MVN--KVLVANRG-----EIAVRIIRACKELGIPTVAIYNEV 35 (451)
T ss_dssp CCS--SEEECCCH-----HHHHHHHHHHHHHTCCEEEEECGG
T ss_pred CCc--eEEEECCc-----HHHHHHHHHHHHcCCeEEEEechh
Confidence 544 78887532 235679999999999999887644
No 210
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=49.79 E-value=17 Score=30.65 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=30.2
Q ss_pred EEE-EEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVL-VIPF-PAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il-~~~~-~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|++ |.+. |+-|-..-...||..|+++|++|.++-.+.
T Consensus 3 ~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 454 4443 688999999999999999999999997655
No 211
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=49.79 E-value=39 Score=31.95 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=25.3
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|.+ ||+++.. | .....+++.+++.|++|+++.+.
T Consensus 1 m~k--~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~ 34 (449)
T 2w70_A 1 MLD--KIVIANR---G--EIALRILRACKELGIKTVAVHSS 34 (449)
T ss_dssp CCS--EEEECCC---H--HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CCc--eEEEeCC---c--HHHHHHHHHHHHcCCeEEEEecc
Confidence 544 7887763 2 24567999999999999988654
No 212
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=49.76 E-value=1.2e+02 Score=25.85 Aligned_cols=39 Identities=21% Similarity=0.308 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHhhcCCCCCccEEEeCCCcc---hHHHHHHHhCCceEE
Q 012594 92 PGCLRNLIEKVNKSNDCEKISCVIADLTVG---WALEVAEQMGIARAA 136 (460)
Q Consensus 92 ~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~---~~~~~A~~lgiP~v~ 136 (460)
....+.+++.+++ ..+.+.|..+. .+..+|+.+|+|++.
T Consensus 114 ~~~m~~vm~~l~~------~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVKE------KNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHH------TTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHH------CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 4456777777766 46999998754 788999999999985
No 213
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=49.70 E-value=13 Score=34.25 Aligned_cols=36 Identities=8% Similarity=0.138 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|.+++||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 19 Mm~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hhcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 5566899999877655 47789999999999988653
No 214
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=49.56 E-value=82 Score=28.12 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=19.8
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCC--CEEEEEeC
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHG--IKVTFVST 40 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rG--h~V~~~~~ 40 (460)
++|++ + |+.|.+- ..|++.|.++| ++|+.+..
T Consensus 25 ~~vlV-t-GatG~iG--~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 25 MNILV-T-GGAGFIG--SNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp EEEEE-E-TTTSHHH--HHHHHHHHHHCTTEEEEEEEC
T ss_pred CeEEE-E-CCccHHH--HHHHHHHHhhCCCcEEEEEec
Confidence 45443 3 5556554 47889999999 55555443
No 215
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=49.43 E-value=68 Score=27.60 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=27.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
-|+++++.++.| =-.++|+.|+++|.+|.+....
T Consensus 7 gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 7 NKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVELL 40 (254)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEECC
Confidence 388999977775 3567899999999999887654
No 216
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=48.96 E-value=28 Score=25.32 Aligned_cols=35 Identities=9% Similarity=0.116 Sum_probs=24.4
Q ss_pred CCccEEEeCCCcc--hHHHHHHH----hCCceEEEcccchH
Q 012594 109 EKISCVIADLTVG--WALEVAEQ----MGIARAAVIPYAPA 143 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~----lgiP~v~~~~~~~~ 143 (460)
.+||+||.|...+ .+..+++. .++|.+.++.....
T Consensus 45 ~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~~ 85 (120)
T 3f6p_A 45 LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSE 85 (120)
T ss_dssp TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSCH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCCh
Confidence 7899999998665 44444443 36898888765543
No 217
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=48.89 E-value=19 Score=31.89 Aligned_cols=38 Identities=18% Similarity=0.319 Sum_probs=26.3
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++++|++. |+.|.+- ..|++.|.++||+|+.++...
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 1 MDKKSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCSC
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECCC
Confidence 6545576655 4455553 467899999999999988753
No 218
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=48.49 E-value=22 Score=33.72 Aligned_cols=40 Identities=23% Similarity=0.255 Sum_probs=33.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHh-CCCEEEEEeCccchh
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAE-HGIKVTFVSTEHMHA 45 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~-rGh~V~~~~~~~~~~ 45 (460)
=+++...|+.|-..-.+.+|...+. .|..|.+++.....+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~ 242 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA 242 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHH
Confidence 4567777899999999999999986 589999999875544
No 219
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=48.28 E-value=35 Score=30.72 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
++||.|+-.++.| +-.+|+.|+++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 3589999998887 55799999999999998744
No 220
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=48.23 E-value=45 Score=29.31 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=50.6
Q ss_pred CCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCc
Q 012594 32 GIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKI 111 (460)
Q Consensus 32 Gh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 111 (460)
..+..+++++.+.-+...+ |++...+...-+..+ .....+.++++.+++ .+.
T Consensus 176 ~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~e---------------ps~~~l~~l~~~ik~----~~v 227 (284)
T 3cx3_A 176 TQKTFVTQHTAFSYLAKRF---------GLNQLGIAGISPEQE---------------PSPRQLTEIQEFVKT----YKV 227 (284)
T ss_dssp SCCCEEEEESCCHHHHHHT---------TCCEEEEECSSTTCC---------------CCSHHHHHHHHHHHH----TTC
T ss_pred CCCEEEEECCchHHHHHHc---------CCEEeeccCCCCCCC---------------CCHHHHHHHHHHHHH----cCC
Confidence 3444566777777777776 676655432211111 112345566666666 889
Q ss_pred cEEEeCCCcc--hHHHHHHHhCCceEEEc
Q 012594 112 SCVIADLTVG--WALEVAEQMGIARAAVI 138 (460)
Q Consensus 112 D~vv~D~~~~--~~~~~A~~lgiP~v~~~ 138 (460)
.+|+++.... .+..+|+..|++.+.+.
T Consensus 228 ~~if~e~~~~~~~~~~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 228 KTIFTESNASSKVAETLVKSTGVGLKTLN 256 (284)
T ss_dssp CCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred CEEEEeCCCCcHHHHHHHHHcCCeEEEec
Confidence 9999998666 56778999999988653
No 221
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=48.11 E-value=20 Score=31.83 Aligned_cols=42 Identities=17% Similarity=0.184 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc-chhHHhhc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH-MHAKITAS 50 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~-~~~~~~~~ 50 (460)
++||+|+-.|..|. .+|..|+++||+|+++.... ..+.+.+.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 45 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQWPAHIEAIRKN 45 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEECCHHHHHHHHhC
Confidence 35899998776663 57889999999999987643 33444443
No 222
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=48.01 E-value=13 Score=33.03 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.++||.|+-.|..|. .+|+.|+++||+|++.....
T Consensus 14 ~~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 14 EQLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp -CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSST
T ss_pred CCCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCCH
Confidence 346899998887774 67899999999999986543
No 223
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=47.79 E-value=73 Score=25.07 Aligned_cols=23 Identities=4% Similarity=0.157 Sum_probs=19.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCccc
Q 012594 21 LMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 21 ~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
...+.+.|+++|+.+.++|....
T Consensus 32 ~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 32 SLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp HHHHHHHHHHTTCEEEEEEECTT
T ss_pred HHHHHHHHHHCCCEEEEEECCCc
Confidence 56788999999999999998653
No 224
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=47.77 E-value=12 Score=31.96 Aligned_cols=39 Identities=15% Similarity=-0.021 Sum_probs=33.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
|||+|..-|+-|-..-...||..|+++|++|.++=.+..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 478886668889999999999999999999999976653
No 225
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=47.06 E-value=80 Score=27.71 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=25.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 29 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 29 KVAFITGAARG---QGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEecc
Confidence 78888866653 3468899999999999998653
No 226
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=47.02 E-value=22 Score=26.98 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=24.0
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh---------CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM---------GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l---------giP~v~~~~~~~ 142 (460)
.+||+||.|...+ .+..+++.+ .+|++.++....
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~ 101 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVT 101 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCCC
Confidence 7899999997665 455555544 278888876544
No 227
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=46.90 E-value=13 Score=33.25 Aligned_cols=44 Identities=18% Similarity=0.317 Sum_probs=30.0
Q ss_pred CCCC-CEEEEEcCCCccChHHHHHHHHHHHhC-----C-CEEEEEeCccchhHHhh
Q 012594 1 MDRE-PHVLVIPFPAQGHAGPLMKLSTKIAEH-----G-IKVTFVSTEHMHAKITA 49 (460)
Q Consensus 1 m~~~-~~Il~~~~~~~gH~~p~~~La~~L~~r-----G-h~V~~~~~~~~~~~~~~ 49 (460)
|.++ +||.|+-.|..|. .+|..|+++ | |+|+++..+...+.+.+
T Consensus 4 m~~~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~ 54 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIRA 54 (317)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHH
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHh
Confidence 4443 5899998887774 568888888 9 99999977433444544
No 228
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=46.77 E-value=1.1e+02 Score=24.55 Aligned_cols=144 Identities=15% Similarity=0.159 Sum_probs=78.2
Q ss_pred CcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccc
Q 012594 272 GSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVAC 351 (460)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~ 351 (460)
+|.|-|-+||.+ +....++..+.|+.++..+-..+.+. ...|+.+. .|+-. .....++.
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~----------~~~~~---a~~~g~~V 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMF----------EYAET---ARERGLKV 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHH----------HHHHH---TTTTTCCE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHH----------HHHHH---HHhcCceE
Confidence 567888899844 67788889999999998876555433 23344322 11111 11122344
Q ss_pred eeeccChh----hhhHhhhcCCceeeccccchh---hhhHHHHHhhh--cceeEee-cCCCCccCHHHHHHHHHHHhcCh
Q 012594 352 FLSHCGWN----STLEGLSMGVPFLCWPYFADQ---YQNRNYIFDAW--KIGLRFF-PDENGIITRQEIQRQVKALLNDG 421 (460)
Q Consensus 352 ~I~hgG~~----sv~eal~~GvP~i~~P~~~dQ---~~~a~~v~~~l--g~g~~~~-~~~~~~~~~~~l~~~i~~~l~~~ 421 (460)
+|.-.|.- ++..+ ..-+|+|.+|....- .+.-.-+.+ . |+.+.-- ....+..++.-++..|-. +.|+
T Consensus 81 iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~~d~ 157 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SFHD 157 (181)
T ss_dssp EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-TTCH
T ss_pred EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-cCCH
Confidence 66665532 33333 457899999985432 111111221 1 3333221 100011234445555533 3588
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012594 422 GIKANALKMKQMARKSLV 439 (460)
Q Consensus 422 ~~~~~a~~l~~~~~~~~~ 439 (460)
+++++++..++.+.+.+.
T Consensus 158 ~l~~kl~~~r~~~~~~v~ 175 (181)
T 4b4k_A 158 DIHDALELRREAIEKDVR 175 (181)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999888888876543
No 229
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=46.68 E-value=22 Score=31.61 Aligned_cols=31 Identities=13% Similarity=0.254 Sum_probs=27.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
.||.|+-.|.+|. ++|+.|.++||+|++.-.
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 3899999999984 689999999999998744
No 230
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=46.27 E-value=92 Score=28.16 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=26.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 46 k~vlVTGas~G---IG~aia~~La~~Ga~Vvl~~r~~ 79 (346)
T 3kvo_A 46 CTVFITGASRG---IGKAIALKAAKDGANIVIAAKTA 79 (346)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESCC
T ss_pred CEEEEeCCChH---HHHHHHHHHHHCCCEEEEEECCh
Confidence 77888866653 33578999999999999987653
No 231
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=46.06 E-value=1.4e+02 Score=25.30 Aligned_cols=32 Identities=25% Similarity=0.188 Sum_probs=23.0
Q ss_pred CccEEE-eCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 110 KISCVI-ADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 110 ~~D~vv-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
.||+|| .|+..- .+..=|.++|||.|.+..+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDTn 190 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDTN 190 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCSS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecCC
Confidence 699776 565333 56777899999999876443
No 232
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=45.88 E-value=78 Score=30.04 Aligned_cols=26 Identities=15% Similarity=0.229 Sum_probs=21.7
Q ss_pred CCccEEEeCCCcchHHHHHHHhCCceEEE
Q 012594 109 EKISCVIADLTVGWALEVAEQMGIARAAV 137 (460)
Q Consensus 109 ~~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 137 (460)
.+||++|.+. ....+|+++|||++.+
T Consensus 384 ~~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 8899999885 3577899999999953
No 233
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=45.64 E-value=22 Score=31.74 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=27.1
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+++||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 35689999777665 56889999999999987654
No 234
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=45.54 E-value=14 Score=34.18 Aligned_cols=29 Identities=38% Similarity=0.441 Sum_probs=24.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEE
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFV 38 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~ 38 (460)
|||+|+-.|-.| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 689998766444 78899999999999998
No 235
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=45.51 E-value=50 Score=31.05 Aligned_cols=25 Identities=20% Similarity=0.170 Sum_probs=19.1
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCC
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGI 33 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh 33 (460)
+|||+++-.++. -.+||+.|++.+.
T Consensus 3 ~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 469999977754 4468999988875
No 236
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=45.48 E-value=78 Score=24.78 Aligned_cols=95 Identities=16% Similarity=0.083 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCccchhHHhh-ccCccccCCCCeEEEEcCCCCCCCCcCcccH
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEHMHAKITA-SMPQKAEQSSLITMVSIPDGLESHEADRRDL 80 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 80 (460)
..+|++.. .-.+=.-++.+|+.|.+. ||++. .|......+++ . |++...+-.... .
T Consensus 11 ~g~V~lsv--~D~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~~---------Gl~v~~v~k~~e-----G--- 69 (152)
T 1b93_A 11 RKHIALVA--HDHCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRAT---------GMNVNAMLSGPM-----G--- 69 (152)
T ss_dssp SCEEEEEE--CGGGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHHH---------CCCCEEECCGGG-----T---
T ss_pred CCEEEEEE--ehhhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHHh---------CceeEEEEecCC-----C---
Confidence 34555443 233445688999999999 99654 56677788877 6 676655542110 0
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCC--cc-h-------HHHHHHHhCCceEE
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLT--VG-W-------ALEVAEQMGIARAA 136 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~--~~-~-------~~~~A~~lgiP~v~ 136 (460)
-++++-++++. .+.|+||--.- .. . -..+|-..+||++.
T Consensus 70 ----------G~p~I~d~I~~-------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 70 ----------GDQQVGALISE-------GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp ----------HHHHHHHHHHT-------TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred ----------CCchHHHHHHC-------CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 12345555555 89999996543 22 1 23468889999994
No 237
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=45.42 E-value=43 Score=29.02 Aligned_cols=34 Identities=21% Similarity=0.185 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
+||++.- + |.+- ..|++.|.++||+|+.++....
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcChh
Confidence 3766663 5 7655 4678999999999999987543
No 238
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=45.36 E-value=86 Score=26.84 Aligned_cols=32 Identities=13% Similarity=0.046 Sum_probs=25.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 78888876655 346889999999999998764
No 239
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=45.03 E-value=34 Score=24.98 Aligned_cols=43 Identities=5% Similarity=0.044 Sum_probs=30.0
Q ss_pred EEEEEc-CC--CccChHHHHHHHHHHHhC-CC-EEEEEeCccchhHHh
Q 012594 6 HVLVIP-FP--AQGHAGPLMKLSTKIAEH-GI-KVTFVSTEHMHAKIT 48 (460)
Q Consensus 6 ~Il~~~-~~--~~gH~~p~~~La~~L~~r-Gh-~V~~~~~~~~~~~~~ 48 (460)
|++|+- .+ +.......+.+|..+.+. || +|.++-...-.....
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~ 50 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGL 50 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGB
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHh
Confidence 565444 44 344556678899999998 99 999998866555443
No 240
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=44.62 E-value=86 Score=27.20 Aligned_cols=33 Identities=12% Similarity=0.232 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 367888866543 346889999999999999874
No 241
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=44.15 E-value=51 Score=31.08 Aligned_cols=32 Identities=16% Similarity=0.195 Sum_probs=24.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
||+++..+ .....+++++++.|++|+++.+..
T Consensus 3 ~ilI~g~g-----~~~~~i~~a~~~~G~~vv~v~~~~ 34 (451)
T 2vpq_A 3 KVLIANRG-----EIAVRIIRACRDLGIQTVAIYSEG 34 (451)
T ss_dssp EEEECCCH-----HHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred eEEEeCCC-----HHHHHHHHHHHHcCCEEEEEeccc
Confidence 78876532 245678999999999999987644
No 242
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=43.79 E-value=2.1e+02 Score=26.75 Aligned_cols=140 Identities=15% Similarity=0.134 Sum_probs=77.1
Q ss_pred CcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccc
Q 012594 272 GSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVAC 351 (460)
Q Consensus 272 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~ 351 (460)
.+.|-|-+||. .+....++....++..+..+-.-+.+. ...|+.+. .++-+..--..+.|
T Consensus 265 ~~~V~Ii~gs~--SD~~~~~~a~~~l~~~gi~~~v~V~sa------HR~p~~~~----------~~~~~~~~~g~~~v-- 324 (425)
T 2h31_A 265 QCRVVVLMGST--SDLGHCEKIKKACGNFGIPCELRVTSA------HKGPDETL----------RIKAEYEGDGIPTV-- 324 (425)
T ss_dssp CCEEEEEESCG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHH----------HHHHHHHTTCCCEE--
T ss_pred CCeEEEEecCc--ccHHHHHHHHHHHHHcCCceEEeeeec------cCCHHHHH----------HHHHHHHHCCCCeE--
Confidence 45677778874 367778888888999998875555433 23444422 11111000000123
Q ss_pred eeeccCh----hhhhHhhhcCCceeeccccchhhhhHHHHH--h--hhcceeEeecCCCCccCHHHHHHHHHHHhcChHH
Q 012594 352 FLSHCGW----NSTLEGLSMGVPFLCWPYFADQYQNRNYIF--D--AWKIGLRFFPDENGIITRQEIQRQVKALLNDGGI 423 (460)
Q Consensus 352 ~I~hgG~----~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~--~--~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~ 423 (460)
+|.-+|. .++..++ .-+|+|.+|....-......+. . . |+.+..-- ...++.-++..|. .+.|+++
T Consensus 325 iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~---~~~nAa~~A~~Il-~~~~~~l 398 (425)
T 2h31_A 325 FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVL---SPEGSAQFAAQIF-GLSNHLV 398 (425)
T ss_dssp EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECC---CHHHHHHHHHHHH-HTTCHHH
T ss_pred EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEec---CchHHHHHHHHHH-ccCCHHH
Confidence 6666664 3455444 4799999998522111111111 1 1 33322211 3356666666665 4568888
Q ss_pred HHHHHHHHHHHHHH
Q 012594 424 KANALKMKQMARKS 437 (460)
Q Consensus 424 ~~~a~~l~~~~~~~ 437 (460)
+++.+..+......
T Consensus 399 ~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 399 WSKLRASILNTWIS 412 (425)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888777763
No 243
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=43.69 E-value=9.2 Score=35.21 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 16 ~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 16 NKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred CeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 389999887777 46789999999999998764
No 244
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=43.62 E-value=1.1e+02 Score=32.98 Aligned_cols=102 Identities=11% Similarity=0.091 Sum_probs=54.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccH
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDL 80 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 80 (460)
|+...||+++..+ . -.+.+++.+++.|++|+.+.+........... -=+++.++....+.. ...+
T Consensus 1 M~~~kkVLIagrG---e--ia~riiraa~elGi~vVav~s~~d~~s~~~~~--------ADe~~~ig~~~~~~~-syld- 65 (1150)
T 3hbl_A 1 MKQIKKLLVANRG---E--IAIRIFRAAAELDISTVAIYSNEDKSSLHRYK--------ADESYLVGSDLGPAE-SYLN- 65 (1150)
T ss_dssp --CCCEEEECCCH---H--HHHHHHHHHHHTTCEEEEEECGGGTTCGGGGT--------SSEEEECCTTSCTTG-GGTC-
T ss_pred CCCCCEEEEECCC---H--HHHHHHHHHHHCCCEEEEEEcCCcccchhhhh--------cceeeecCCCCCccc-cccC-
Confidence 5545588885432 2 34689999999999999997755433222111 123455554333221 1111
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCC--c--chHHHHHHHhCCceE
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLT--V--GWALEVAEQMGIARA 135 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~--~--~~~~~~A~~lgiP~v 135 (460)
...+++..+. .++|+|+.... . ......++.+|+|++
T Consensus 66 --------------~~~Ii~~a~~----~~~DaI~pg~gflsE~~~~a~~le~~Gi~~i 106 (1150)
T 3hbl_A 66 --------------IERIIDVAKQ----ANVDAIHPGYGFLSENEQFARRCAEEGIKFI 106 (1150)
T ss_dssp --------------HHHHHHHHHH----TTCSEEECTTTTSTTCHHHHHHHHHTTCEES
T ss_pred --------------HHHHHHHHHH----hCCCEEEECCCcccccHHHHHHHHHCCCCee
Confidence 1222333333 77999884421 1 123456677899876
No 245
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=43.47 E-value=1.4e+02 Score=25.76 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=26.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 34 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 67 (275)
T 4imr_A 34 RTALVTGSSRG---IGAAIAEGLAGAGAHVILHGVKP 67 (275)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEcCCH
Confidence 78888866543 24688999999999999887643
No 246
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=43.25 E-value=92 Score=29.87 Aligned_cols=42 Identities=12% Similarity=0.027 Sum_probs=34.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeCccchhHH
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEH-GIKVTFVSTEHMHAKI 47 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~r-Gh~V~~~~~~~~~~~~ 47 (460)
=+++...|+.|-..-.+.+|..++.+ |..|.+++.+...+.+
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 35666778999999999999999987 9999999987654433
No 247
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=43.20 E-value=23 Score=31.79 Aligned_cols=38 Identities=21% Similarity=0.347 Sum_probs=23.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+...+.++++ |+.|-+- .+|++.|.++||+|+.++..
T Consensus 1 ~~~~~~~vlVT-GatGfIG--~~l~~~L~~~G~~V~~~~r~ 38 (337)
T 2c29_D 1 MGSQSETVCVT-GASGFIG--SWLVMRLLERGYTVRATVRD 38 (337)
T ss_dssp -----CEEEET-TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEE-CCchHHH--HHHHHHHHHCCCEEEEEECC
Confidence 55444555566 5555444 46889999999999977654
No 248
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=43.13 E-value=26 Score=30.76 Aligned_cols=39 Identities=23% Similarity=0.304 Sum_probs=31.4
Q ss_pred CCEEEEEcC--CCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPF--PAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~--~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
++|++.+.. |+-|-..-...||..|+++|++|.++=.+.
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 446665543 688999999999999999999999986655
No 249
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=42.88 E-value=1.6e+02 Score=25.35 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=20.1
Q ss_pred CCCCCEEEEEcCCCccChHH--HHHHHHHHHhCCCEEEEE
Q 012594 1 MDREPHVLVIPFPAQGHAGP--LMKLSTKIAEHGIKVTFV 38 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p--~~~La~~L~~rGh~V~~~ 38 (460)
|.++.+|+++.......+.. ...+-+++.++|+++.+.
T Consensus 1 ~s~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~ 40 (305)
T 3g1w_A 1 MSLNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYR 40 (305)
T ss_dssp ----CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEe
Confidence 56667887776554433332 224555666778877764
No 250
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.83 E-value=30 Score=29.19 Aligned_cols=34 Identities=6% Similarity=-0.070 Sum_probs=25.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++++.++.| --.++++.|+++|++|+++....
T Consensus 4 k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r~~ 37 (236)
T 1ooe_A 4 GKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDLSA 37 (236)
T ss_dssp EEEEEETTTSH---HHHHHHHHHHHTTEEEEEEESSC
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEecCc
Confidence 66777755443 34688999999999999887543
No 251
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=42.70 E-value=12 Score=33.12 Aligned_cols=28 Identities=7% Similarity=-0.048 Sum_probs=23.2
Q ss_pred ccceeeccChhhhhHhhh----cCCceeeccc
Q 012594 349 VACFLSHCGWNSTLEGLS----MGVPFLCWPY 376 (460)
Q Consensus 349 ~~~~I~hgG~~sv~eal~----~GvP~i~~P~ 376 (460)
++++|.-||-||+.+++. .++|++.++.
T Consensus 64 ~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 64 ADLAVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp CSEEEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred CCEEEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 455999999999999974 3789999863
No 252
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=42.59 E-value=1.3e+02 Score=25.94 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=24.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 27 k~~lVTGas~g---IG~aia~~la~~G~~V~~~~r~ 59 (271)
T 4ibo_A 27 RTALVTGSSRG---LGRAMAEGLAVAGARILINGTD 59 (271)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEECCSC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 78888866543 2358899999999999887653
No 253
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=42.52 E-value=31 Score=29.15 Aligned_cols=23 Identities=26% Similarity=0.257 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCCEEEEEeCcc
Q 012594 20 PLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 20 p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
--.++|++|+++|++|+++..+.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCc
Confidence 44688999999999999987654
No 254
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=42.51 E-value=36 Score=25.69 Aligned_cols=42 Identities=10% Similarity=0.033 Sum_probs=28.6
Q ss_pred EEE-EEcCCCccC--hHHHHHHHHHHHhCCCEE-EEEeCccchhHH
Q 012594 6 HVL-VIPFPAQGH--AGPLMKLSTKIAEHGIKV-TFVSTEHMHAKI 47 (460)
Q Consensus 6 ~Il-~~~~~~~gH--~~p~~~La~~L~~rGh~V-~~~~~~~~~~~~ 47 (460)
|++ +++.+..|+ ....+.+|..+.+.||+| .++-...-....
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~ 47 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNS 47 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHH
Confidence 444 455555543 456688899999999999 888775544433
No 255
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=42.46 E-value=29 Score=29.64 Aligned_cols=34 Identities=0% Similarity=-0.109 Sum_probs=25.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++++.++.| --.+||+.|+++|++|.++....
T Consensus 23 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~~ 56 (251)
T 3orf_A 23 KNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFRE 56 (251)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 67777755542 34688999999999999887643
No 256
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=42.33 E-value=32 Score=29.93 Aligned_cols=39 Identities=10% Similarity=0.033 Sum_probs=26.3
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|....|+++++.++. -+ -.++++.|+++|++|+++....
T Consensus 1 M~~~~k~vlVTGas~-gI--G~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 1 MSESAKVWLVTGASS-GF--GRAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp ---CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCCCcEEEEECCCC-hH--HHHHHHHHHHCCCEEEEEeCCH
Confidence 443457788885553 23 3478999999999999887643
No 257
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=42.01 E-value=23 Score=30.48 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=29.9
Q ss_pred EEEEEc-CCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIP-FPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~-~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|.|.+ -|+-|-..-...||..|+++|++|.++-.+.
T Consensus 4 ~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 4 TITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp EEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 344443 4688999999999999999999999997654
No 258
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=41.95 E-value=30 Score=31.00 Aligned_cols=33 Identities=9% Similarity=0.262 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.+||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 3589999888877 56889999999999987553
No 259
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=41.91 E-value=28 Score=31.53 Aligned_cols=72 Identities=8% Similarity=0.135 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhh
Q 012594 286 SQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGL 365 (460)
Q Consensus 286 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal 365 (460)
+.+....+.+++.....+.||.+.++.. -.++.++++...|-++|+. ||-+.-...+.-++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 123 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYN-----------------SNGLLKYLDYDLIRENPKF--FCGYSDITALNNAI 123 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHHhhcChhHHHhCCeE--EEEecchHHHHHHH
Confidence 5567788999998888888888776611 1234455555555555555 66666666666666
Q ss_pred h--cCCceeeccc
Q 012594 366 S--MGVPFLCWPY 376 (460)
Q Consensus 366 ~--~GvP~i~~P~ 376 (460)
+ .|++.+-=|.
T Consensus 124 ~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 124 YTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHCBCEEECCC
T ss_pred HHhhCCcEEEccc
Confidence 5 3665554443
No 260
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=41.55 E-value=34 Score=33.59 Aligned_cols=39 Identities=3% Similarity=-0.036 Sum_probs=35.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+.+|++.+.++-.|-....-++..|..+|++|.++...-
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~v 136 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMV 136 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSB
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCC
Confidence 569999999999999999999999999999999987654
No 261
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=41.39 E-value=46 Score=24.25 Aligned_cols=34 Identities=12% Similarity=0.215 Sum_probs=23.6
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 142 (460)
.+||+||.|...+ .+..+++.+ ++|++.++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 46 VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 7899999997654 445444443 689988876544
No 262
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=41.34 E-value=26 Score=30.94 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=25.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++++|++. |+.|.+- .+|++.|.++||+|+.++...
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLI--GATGYIG--RHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEECCc
Confidence 5545566655 4445443 467899999999999987653
No 263
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=41.25 E-value=36 Score=25.27 Aligned_cols=45 Identities=7% Similarity=0.048 Sum_probs=30.5
Q ss_pred CCCCCEEEEEcCCCc-cCh-HHHHHHHHHHHhCC--CEEEEEeCccchh
Q 012594 1 MDREPHVLVIPFPAQ-GHA-GPLMKLSTKIAEHG--IKVTFVSTEHMHA 45 (460)
Q Consensus 1 m~~~~~Il~~~~~~~-gH~-~p~~~La~~L~~rG--h~V~~~~~~~~~~ 45 (460)
|...+|++|+-+-.. -.. +..+..|...+++| |+|.++...+..+
T Consensus 4 ~~~~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 4 MSANDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp SSTTSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred cccCCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 434467776665432 222 33677788889999 8999998877666
No 264
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=41.24 E-value=29 Score=29.58 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=24.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++++.|+++|++|+++...
T Consensus 3 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 57777765543 3468899999999999988654
No 265
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=41.22 E-value=21 Score=31.22 Aligned_cols=33 Identities=18% Similarity=0.077 Sum_probs=26.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|||.|+-.|..| ..+|..|+++||+|+++....
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcCc
Confidence 378888776666 368899999999999986543
No 266
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=41.04 E-value=1.2e+02 Score=27.38 Aligned_cols=40 Identities=18% Similarity=0.324 Sum_probs=33.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
.+|+++..|+.|--.-+..|+..|+.+|++|.++..+...
T Consensus 80 ~~I~i~G~~G~GKSTl~~~L~~~l~~~g~kV~vi~~Dp~~ 119 (355)
T 3p32_A 80 HRVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSS 119 (355)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEEEC---
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhCCCceEEEecCCCC
Confidence 4677888899999999999999999999999999876543
No 267
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=40.88 E-value=17 Score=33.06 Aligned_cols=36 Identities=19% Similarity=0.309 Sum_probs=27.6
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|.+..+|+|+-.|..| +..|..|+++|++|+++-..
T Consensus 1 M~~~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 1 MSTDIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp --CCEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCcCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 6556688888877555 77899999999999998654
No 268
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=40.79 E-value=98 Score=29.09 Aligned_cols=40 Identities=20% Similarity=0.352 Sum_probs=32.8
Q ss_pred CEEEEEc-CCCccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 5 PHVLVIP-FPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 5 ~~Il~~~-~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
.+|+++. .++.|-..-...||..|+++|++|.++..+.+.
T Consensus 97 ~~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r 137 (433)
T 3kl4_A 97 PFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYR 137 (433)
T ss_dssp SEEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 4555444 468899999999999999999999999877554
No 269
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=40.52 E-value=43 Score=24.62 Aligned_cols=63 Identities=6% Similarity=-0.034 Sum_probs=41.8
Q ss_pred CCcccceeeccChhh---------hhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHH
Q 012594 346 HPSVACFLSHCGWNS---------TLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKA 416 (460)
Q Consensus 346 ~~~~~~~I~hgG~~s---------v~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~ 416 (460)
.+++ +|--.|..| +..|...|+|++++=....+. .-..+.++ +..+. .++.+.|.++|+.
T Consensus 38 ~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~iV-------~Wn~~~I~~aI~~ 106 (111)
T 1eiw_A 38 DADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSEVV-------GWNPHCIRDALED 106 (111)
T ss_dssp SCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSEEE-------CSCHHHHHHHHHH
T ss_pred cCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cceec-------cCCHHHHHHHHHh
Confidence 3555 888888887 677889999999884444331 22224432 33322 3689999999998
Q ss_pred Hhc
Q 012594 417 LLN 419 (460)
Q Consensus 417 ~l~ 419 (460)
.++
T Consensus 107 ~~~ 109 (111)
T 1eiw_A 107 ALD 109 (111)
T ss_dssp HHC
T ss_pred ccC
Confidence 873
No 270
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=40.49 E-value=78 Score=29.94 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=33.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHh-CCCEEEEEeCccchh
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAE-HGIKVTFVSTEHMHA 45 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~-rGh~V~~~~~~~~~~ 45 (460)
-+++...|+.|-..-.+.++..++. .|..|.+++.+....
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~ 245 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQ 245 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHH
Confidence 4667777899999999999999986 689999999875443
No 271
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=40.26 E-value=43 Score=25.00 Aligned_cols=33 Identities=15% Similarity=0.136 Sum_probs=22.9
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-------CCceEEEcccc
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-------GIARAAVIPYA 141 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 141 (460)
.+||+||.|...+ .+..+++.+ .+|+|.++...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 87 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKP 87 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCC
Confidence 7899999997654 455554443 57888877554
No 272
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=39.99 E-value=51 Score=26.09 Aligned_cols=50 Identities=14% Similarity=0.047 Sum_probs=38.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITAS 50 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~ 50 (460)
|.++.-.+++..+..--+.+.+-||..-+..|++|+++-+..-...+.+.
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K~ 51 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRDP 51 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBCG
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhccC
Confidence 43333345666688888999999999999999999999887666666543
No 273
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=39.33 E-value=43 Score=25.67 Aligned_cols=34 Identities=9% Similarity=0.044 Sum_probs=23.3
Q ss_pred CCccEEEeCCCcc--hHHHHHHH-------hCCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQ-------MGIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~-------lgiP~v~~~~~~~ 142 (460)
.+||+||.|.... .+..+++. -++|+|+++....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~ 92 (154)
T 3gt7_A 50 TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSD 92 (154)
T ss_dssp CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCC
Confidence 7899999997654 44444433 3688998876544
No 274
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=39.02 E-value=38 Score=29.43 Aligned_cols=34 Identities=18% Similarity=0.307 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
++||++. |+ |.+ -..|++.|.++||+|+.++...
T Consensus 3 ~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIA--GC-GDL--GLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 3577766 35 743 4578999999999999997643
No 275
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=38.90 E-value=46 Score=28.55 Aligned_cols=35 Identities=17% Similarity=0.150 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
++|.++++.++.| + -.++++.|+++|++|+++...
T Consensus 6 ~~k~vlVTGas~g-I--G~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTKG-L--GKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCch-h--HHHHHHHHHHCCCEEEEEcCC
Confidence 4577888855542 2 368899999999999988554
No 276
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=38.59 E-value=32 Score=29.81 Aligned_cols=42 Identities=12% Similarity=0.109 Sum_probs=34.5
Q ss_pred CCEEEEEcCC---CccChHHHHHHHHHHHhCCCEEEEEeCccchh
Q 012594 4 EPHVLVIPFP---AQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHA 45 (460)
Q Consensus 4 ~~~Il~~~~~---~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~ 45 (460)
.+|-+|++.| +.|-=.-...|+..|..||++|+..=.+++.+
T Consensus 22 ~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYIN 66 (295)
T ss_dssp CCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSC
T ss_pred cceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccccee
Confidence 4688999987 56777778899999999999999997766543
No 277
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=38.51 E-value=15 Score=35.64 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=27.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+++||+|+-.|..| +.+|+.|.++|++||++...+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 35799999866444 577899998999999998754
No 278
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=38.46 E-value=37 Score=28.49 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=25.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+|+++++.++.| --.++++.|+++|++|.+....
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356777755543 3468899999999999888764
No 279
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=38.44 E-value=27 Score=29.05 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.++|.|+-.|..| ..+|..|+++||+|+++...
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 4588888766655 56788999999999988653
No 280
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=38.27 E-value=27 Score=31.79 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=27.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|.....|+|+-.|..| +.+|.+|+++|++|+++-.
T Consensus 3 m~~~~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIG-----LSSALILARKGYSVHILAR 37 (363)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCEEEECCCHHH-----HHHHHHHHhCCCEEEEEec
Confidence 4445689998877544 6788999999999999954
No 281
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=38.25 E-value=18 Score=32.44 Aligned_cols=37 Identities=14% Similarity=0.197 Sum_probs=28.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCC-EEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGI-KVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh-~V~~~~~~~ 42 (460)
|.+++||.++-.|..|.. +|..|+++|| +|+++-...
T Consensus 1 M~~~~kI~VIGaG~~G~~-----ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGN-----IAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHH-----HHHHHHhCCCceEEEEeCCc
Confidence 777789999976655543 8888999999 988886543
No 282
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=38.19 E-value=1.7e+02 Score=24.25 Aligned_cols=103 Identities=8% Similarity=0.049 Sum_probs=57.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCcc-c---hhHHhhccCccccCCCCeEEEEcCCC-CCCCCcCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEH-M---HAKITASMPQKAEQSSLITMVSIPDG-LESHEADR 77 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~ 77 (460)
+||+++..+.. + -+.+|.+...+. ..+|..+.++. . .+..++. |+.+..++.. +..
T Consensus 3 ~riavl~Sg~G-s--nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~---------gIp~~~~~~~~~~~----- 65 (211)
T 3p9x_A 3 KRVAIFASGSG-T--NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVH---------EIPVCALDPKTYPS----- 65 (211)
T ss_dssp CEEEEECCTTC-H--HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTT---------TCCEEECCGGGSSS-----
T ss_pred CEEEEEEeCCc-h--HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHc---------CCCEEEeChhhcCc-----
Confidence 38998887753 2 255566655432 25788776653 2 2333444 7777665421 110
Q ss_pred ccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc-hHHHHHHHhCCceEEEcccc
Q 012594 78 RDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG-WALEVAEQMGIARAAVIPYA 141 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 141 (460)
...... ++++.+++ .+||+||+-.+.. -...+-+.....++-++++.
T Consensus 66 ----------r~~~d~---~~~~~l~~----~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpSL 113 (211)
T 3p9x_A 66 ----------KEAYEI---EVVQQLKE----KQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSL 113 (211)
T ss_dssp ----------HHHHHH---HHHHHHHH----TTCCEEEESSCCSCCCHHHHHHHTTSEEEEESSC
T ss_pred ----------hhhhHH---HHHHHHHh----cCCCEEEEeCchhhcCHHHHhhccCCeEEECCcc
Confidence 001122 33444444 8999999876543 44555566666678777664
No 283
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=38.16 E-value=42 Score=25.98 Aligned_cols=44 Identities=18% Similarity=0.095 Sum_probs=34.5
Q ss_pred EEE-EEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhh
Q 012594 6 HVL-VIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITA 49 (460)
Q Consensus 6 ~Il-~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~ 49 (460)
|++ ++..+..-.+.+.+.+|...++.|++|+++.+..-...+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 554 45556778888999999999999999999999766655544
No 284
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=37.82 E-value=58 Score=24.17 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=23.3
Q ss_pred CCccEEEeCCCcc--hHHHHHHH-------hCCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQ-------MGIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~-------lgiP~v~~~~~~~ 142 (460)
.+||+||.|.... .+..+.+. -++|+|.++....
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~ 91 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAR 91 (140)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCC
Confidence 7899999997654 44444433 2578888776554
No 285
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=37.75 E-value=26 Score=30.16 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=32.3
Q ss_pred CCEEEEEc--CCCccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 4 EPHVLVIP--FPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 4 ~~~Il~~~--~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
+++++.+. -|+-|-..-...||..|+++|++|.++=.+...
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~~ 47 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQG 47 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 35655444 367888999999999999999999999776543
No 286
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=37.51 E-value=40 Score=29.03 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=31.4
Q ss_pred CEEE-EEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 5 PHVL-VIPF-PAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 5 ~~Il-~~~~-~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
++++ |.+. |+-|-..-...||..|+++|++|.++=.+...
T Consensus 18 ~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 18 KSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp SCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4554 4433 68899999999999999999999998766543
No 287
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=37.43 E-value=63 Score=23.64 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=21.9
Q ss_pred CCccEEEeCCCcc--hHHHHHHH-------hCCceEEEcccc
Q 012594 109 EKISCVIADLTVG--WALEVAEQ-------MGIARAAVIPYA 141 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 141 (460)
.+||+||.|.... .+..+.+. -++|+|.++...
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 87 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYA 87 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCC
Confidence 7899999997654 34443332 268888877543
No 288
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=37.25 E-value=65 Score=22.81 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=22.3
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccc
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYA 141 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 141 (460)
.+||+||.|...+ .+..+.+.+ .+|.+.++...
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 83 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYS 83 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCG
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCc
Confidence 7899999997654 344444433 57888876553
No 289
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=37.22 E-value=1.8e+02 Score=25.70 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=24.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 28 k~vlVTGas~G---IG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 28 RVVIVTGAGGG---IGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 77888866542 345789999999999998864
No 290
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=37.12 E-value=43 Score=29.29 Aligned_cols=34 Identities=15% Similarity=0.234 Sum_probs=27.6
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
-|+++++.++.| =-.++|+.|++.|.+|.+....
T Consensus 29 gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r~ 62 (273)
T 4fgs_A 29 AKIAVITGATSG---IGLAAAKRFVAEGARVFITGRR 62 (273)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 389999987765 3468999999999999887654
No 291
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=37.07 E-value=40 Score=29.93 Aligned_cols=81 Identities=9% Similarity=0.014 Sum_probs=47.2
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCccccee
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFL 353 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I 353 (460)
.+.++--|-.....+.+..+...++..+..+.+..... +....+ +. .++.. ..+.+|
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~---------~~~a~~-------~~-----~~~~~--~~d~vv 68 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE---------QGDATK-------YC-----QEFAS--KVDLII 68 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS---------TTHHHH-------HH-----HHHTT--TCSEEE
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC---------cchHHH-------HH-----HHhhc--CCCEEE
Confidence 45555544333234556677777777777766554322 111000 00 01111 344599
Q ss_pred eccChhhhhHhhh------cCCceeecccc
Q 012594 354 SHCGWNSTLEGLS------MGVPFLCWPYF 377 (460)
Q Consensus 354 ~hgG~~sv~eal~------~GvP~i~~P~~ 377 (460)
.-||-||+.|++. .++|+.++|..
T Consensus 69 ~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 69 VFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 9999999999864 57899999974
No 292
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=37.07 E-value=1.1e+02 Score=22.52 Aligned_cols=61 Identities=7% Similarity=-0.100 Sum_probs=35.1
Q ss_pred cCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHH
Q 012594 367 MGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQ 432 (460)
Q Consensus 367 ~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~ 432 (460)
..+|+|++--..+.......+.. .|+--.+. +.++.++|..+|++++......+..+++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~----KP~~~~~L~~~i~~~~~~~~~~~~~~~~~~ 131 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLT----KPWHPEQLLSSARNAARMFTLARENERLSL 131 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788777555444433344433 14533342 568999999999999864433333333333
No 293
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=37.03 E-value=28 Score=29.13 Aligned_cols=41 Identities=27% Similarity=0.287 Sum_probs=28.0
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++..|+++. |..++..-+..++..|.++|++|..+-.+.
T Consensus 1 me~g~~vv~lH-G~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 41 (258)
T 3dqz_A 1 MERKHHFVLVH-NAYHGAWIWYKLKPLLESAGHRVTAVELAA 41 (258)
T ss_dssp --CCCEEEEEC-CTTCCGGGGTTHHHHHHHTTCEEEEECCTT
T ss_pred CCCCCcEEEEC-CCCCccccHHHHHHHHHhCCCEEEEecCCC
Confidence 55555666666 444555557789999999999998875543
No 294
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=36.98 E-value=1.8e+02 Score=27.13 Aligned_cols=38 Identities=13% Similarity=0.235 Sum_probs=31.9
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 7 VLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 7 Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
|+++..++.|-..-...||..|+.+|++|.++..+.+.
T Consensus 101 i~i~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r 138 (425)
T 2ffh_A 101 WFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQR 138 (425)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeeccccC
Confidence 45555568899999999999999999999999877544
No 295
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=36.92 E-value=13 Score=31.12 Aligned_cols=32 Identities=13% Similarity=0.204 Sum_probs=24.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
||+++-.| .+ -..+|+.|.++||+|+++..+.
T Consensus 2 ~iiIiG~G---~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGE---TT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCH---HH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCC---HH--HHHHHHHHHhCCCeEEEEECCH
Confidence 57777643 32 3578999999999999998654
No 296
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=36.69 E-value=25 Score=31.72 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=30.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc-chhHHhhc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH-MHAKITAS 50 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~-~~~~~~~~ 50 (460)
+||.|+-.|..| ..+|..|++.||+|++..... ..+.+.+.
T Consensus 15 ~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~~~~~~~l~~~ 56 (335)
T 1z82_A 15 MRFFVLGAGSWG-----TVFAQMLHENGEEVILWARRKEIVDLINVS 56 (335)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCHHHHHHHHHh
Confidence 589999888777 578899999999999987643 33444444
No 297
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=36.64 E-value=32 Score=32.88 Aligned_cols=36 Identities=25% Similarity=0.161 Sum_probs=28.3
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~ 41 (460)
|.+++||.|+-.|..| ..+|..|+++ ||+|+++...
T Consensus 2 M~~~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECSC
T ss_pred CCCccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEECC
Confidence 6667899999877766 4678888888 8999988543
No 298
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=36.60 E-value=15 Score=35.24 Aligned_cols=29 Identities=24% Similarity=0.350 Sum_probs=23.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVS 39 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~ 39 (460)
||+|+-.|-.| +.-|..|+++||+|+++=
T Consensus 3 ~VvVIGaG~~G-----L~aA~~La~~G~~V~VlE 31 (501)
T 4dgk_A 3 PTTVIGAGFGG-----LALAIRLQAAGIPVLLLE 31 (501)
T ss_dssp CEEEECCHHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CEEEECCcHHH-----HHHHHHHHHCCCcEEEEc
Confidence 79888766444 667889999999999983
No 299
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=36.34 E-value=31 Score=29.77 Aligned_cols=37 Identities=14% Similarity=0.204 Sum_probs=31.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|.|..-|+-|-..-...||..|+++|++|.++=.+.
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 39 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP 39 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 5666666889999999999999999999999985544
No 300
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=36.29 E-value=52 Score=24.04 Aligned_cols=35 Identities=11% Similarity=0.102 Sum_probs=22.1
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccchH
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAPA 143 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~~ 143 (460)
.+||+||.|.... .+..+.+.+ .+|++.++.....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~ 91 (130)
T 3eod_A 50 FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENM 91 (130)
T ss_dssp CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCH
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCH
Confidence 7899999997554 333333332 5899988766543
No 301
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=36.28 E-value=45 Score=28.54 Aligned_cols=33 Identities=21% Similarity=0.324 Sum_probs=25.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 7 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 7 KVVIITGGSSG---MGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67888866553 3468899999999999887654
No 302
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=36.10 E-value=52 Score=28.22 Aligned_cols=36 Identities=17% Similarity=0.149 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
-|+++++..+.+ --=-.++|+.|+++|++|.+....
T Consensus 6 gK~alVTGaa~~-~GIG~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 6 NKTYVIMGIANK-RSIAFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp TCEEEEECCCST-TCHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCC-chHHHHHHHHHHHCCCEEEEEECC
Confidence 488888864321 112478999999999999998764
No 303
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=36.02 E-value=49 Score=23.74 Aligned_cols=35 Identities=11% Similarity=0.106 Sum_probs=23.8
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccchH
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAPA 143 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~~ 143 (460)
.+||+||.|...+ .+..+++.+ ++|.+.++.....
T Consensus 46 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~ 87 (120)
T 1tmy_A 46 LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQ 87 (120)
T ss_dssp HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCCH
Confidence 6799999997655 444444433 5898888766543
No 304
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=35.99 E-value=1.7e+02 Score=23.42 Aligned_cols=145 Identities=18% Similarity=0.188 Sum_probs=78.5
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCccccee
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFL 353 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I 353 (460)
.|-|-.||. .+....++....++..+..+-..+.+. ...|+.+.+ |+.. .....++.+|
T Consensus 14 ~V~IimGS~--SD~~v~~~a~~~L~~~Gi~~ev~V~Sa------HR~p~~~~~----------~~~~---a~~~g~~ViI 72 (174)
T 3kuu_A 14 KIAIVMGSK--SDWATMQFAADVLTTLNVPFHVEVVSA------HRTPDRLFS----------FAEQ---AEANGLHVII 72 (174)
T ss_dssp CEEEEESSG--GGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHH---TTTTTCSEEE
T ss_pred cEEEEECcH--HHHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHH---HHhCCCcEEE
Confidence 566667773 367778888888999998876555433 234444321 1110 1112234477
Q ss_pred eccChh----hhhHhhhcCCceeeccccchhh-hhHHHH--Hh-hhcceeEe-ecCCCCccCHHHHHHHHHHHhcChHHH
Q 012594 354 SHCGWN----STLEGLSMGVPFLCWPYFADQY-QNRNYI--FD-AWKIGLRF-FPDENGIITRQEIQRQVKALLNDGGIK 424 (460)
Q Consensus 354 ~hgG~~----sv~eal~~GvP~i~~P~~~dQ~-~~a~~v--~~-~lg~g~~~-~~~~~~~~~~~~l~~~i~~~l~~~~~~ 424 (460)
.-.|.. ++..+ ..-+|+|.+|...-.. .....+ .. --|+.+.. ..++.+..++.-++..|.. +.|++++
T Consensus 73 a~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d~~l~ 150 (174)
T 3kuu_A 73 AGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-LHDTELA 150 (174)
T ss_dssp EEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTCHHHH
T ss_pred EECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHc-CCCHHHH
Confidence 766643 33333 3468999999853211 111111 11 01442222 1100022345555655543 4589999
Q ss_pred HHHHHHHHHHHHHhhcC
Q 012594 425 ANALKMKQMARKSLVEG 441 (460)
Q Consensus 425 ~~a~~l~~~~~~~~~~~ 441 (460)
++.+..++++++.+.+.
T Consensus 151 ~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 151 GRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999988765443
No 305
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=35.96 E-value=81 Score=25.38 Aligned_cols=37 Identities=16% Similarity=0.279 Sum_probs=25.5
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.. ++|++. |+.|-+ -..|++.|.++||+|+.++...
T Consensus 1 M~~-~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAV-KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCC-CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESCG
T ss_pred CCC-CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeCh
Confidence 543 466554 444433 3578899999999999988643
No 306
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=35.85 E-value=55 Score=24.93 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=23.4
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 142 (460)
.+||+||.|.... .+..+++.+ .+|+|.++....
T Consensus 50 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 50 TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 7799999997554 344444333 689998876654
No 307
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=35.75 E-value=61 Score=24.56 Aligned_cols=43 Identities=23% Similarity=0.308 Sum_probs=28.7
Q ss_pred HHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccch
Q 012594 96 RNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAP 142 (460)
Q Consensus 96 ~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 142 (460)
.+.++.+.. .+||+||.|.... .+..+++.+ ++|+|.++....
T Consensus 56 ~~al~~l~~----~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 56 QEAIQLLEK----ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHHTT----SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHhhc----cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 455555555 7899999997654 444444433 689888876654
No 308
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=35.66 E-value=74 Score=29.42 Aligned_cols=92 Identities=9% Similarity=0.012 Sum_probs=49.2
Q ss_pred HHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEE--EEcCCCCCCCCcCcccHHHHHHHHHhhchHHHHHHHH
Q 012594 23 KLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITM--VSIPDGLESHEADRRDLHKVRQSMLTVMPGCLRNLIE 100 (460)
Q Consensus 23 ~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 100 (460)
.|.+.|.+.|.+|.+++.+...+...+........ ++++ ..++.+. .. ..+.+..+
T Consensus 43 ~l~~~l~~~g~r~liVtd~~~~~~~~~~v~~~L~~--g~~~~~~~~~~~p-----~~---------------~~v~~~~~ 100 (387)
T 3uhj_A 43 KLAAYLAPLGKRALVLIDRVLFDALSERIGKSCGD--SLDIRFERFGGEC-----CT---------------SEIERVRK 100 (387)
T ss_dssp TTHHHHGGGCSEEEEEECTTTHHHHHHHC--------CCEEEEEECCSSC-----SH---------------HHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEECchHHHHHHHHHHHHHHc--CCCeEEEEcCCCC-----CH---------------HHHHHHHH
Confidence 45666777788899988876554332222211111 3443 2232211 11 12333444
Q ss_pred HHhhcCCCCCccEEEeCCCcc---hHHHHHHHhCCceEEEccc
Q 012594 101 KVNKSNDCEKISCVIADLTVG---WALEVAEQMGIARAAVIPY 140 (460)
Q Consensus 101 ~l~~~~~~~~~D~vv~D~~~~---~~~~~A~~lgiP~v~~~~~ 140 (460)
.+++ .++|+||+=..-. .+-.+|...++|+|.+-+.
T Consensus 101 ~~~~----~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 101 VAIE----HGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp HHHH----HTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSS
T ss_pred HHhh----cCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCc
Confidence 4444 6789999765433 4556677889999975444
No 309
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=35.63 E-value=43 Score=29.81 Aligned_cols=40 Identities=15% Similarity=0.197 Sum_probs=25.7
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|.+..+|+++.-.----..-+-.....++++|++|++++-
T Consensus 1 m~~~~~vL~v~AHPDDe~l~~ggtla~~~~~G~~V~vv~l 40 (303)
T 1q74_A 1 MSETPRLLFVHAHPDDESLSNGATIAHYTSRGAQVHVVTC 40 (303)
T ss_dssp --CCCEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCeEEEEEeCCchHHHhHHHHHHHHHHCCCcEEEEEE
Confidence 6556688766644444444455666677778999999963
No 310
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=35.62 E-value=66 Score=27.08 Aligned_cols=40 Identities=18% Similarity=0.039 Sum_probs=26.6
Q ss_pred HHHHHhhcCCCCCccEEEeCCCcch-------HHHHHHHhCCceEEEcc
Q 012594 98 LIEKVNKSNDCEKISCVIADLTVGW-------ALEVAEQMGIARAAVIP 139 (460)
Q Consensus 98 ~l~~l~~~~~~~~~D~vv~D~~~~~-------~~~~A~~lgiP~v~~~~ 139 (460)
+++.++... .+||+|++|..... |..+.-.+++|.|.+.=
T Consensus 93 ~l~al~~L~--~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 93 FLKAWEKLR--TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp HHHHHTTCC--SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred HHHHHHhcC--CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 334444433 57999999986553 45566677999997653
No 311
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=35.40 E-value=1.5e+02 Score=27.84 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=24.3
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeC
Q 012594 2 DREPHVLVIPFPAQGHAGPLMKLSTKIAEH-GIKVTFVST 40 (460)
Q Consensus 2 ~~~~~Il~~~~~~~gH~~p~~~La~~L~~r-Gh~V~~~~~ 40 (460)
.+++||+++..++ ....++..|+++ |++++++.+
T Consensus 19 ~~~~~iliiG~g~-----r~~a~a~~~~~~~g~~~v~~~~ 53 (451)
T 2yrx_A 19 QSHMNVLVIGRGG-----REHAIAWKAAQSPLVGKLYVAP 53 (451)
T ss_dssp CSSEEEEEEECSH-----HHHHHHHHHHTCTTEEEEEEEE
T ss_pred CCCCEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 3457899988763 457788888765 888777654
No 312
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=35.36 E-value=59 Score=23.36 Aligned_cols=34 Identities=9% Similarity=0.188 Sum_probs=23.8
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh----CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM----GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l----giP~v~~~~~~~ 142 (460)
.+||+||.|...+ .+..+++.+ .+|.+.++....
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 84 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSD 84 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCC
Confidence 7899999997654 455555544 588888776554
No 313
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=35.35 E-value=48 Score=24.48 Aligned_cols=42 Identities=19% Similarity=0.276 Sum_probs=0.0
Q ss_pred HHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccc
Q 012594 96 RNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYA 141 (460)
Q Consensus 96 ~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 141 (460)
.+.++.+.. .+||+||.|...+ .+..+++.+ .+|+|.++...
T Consensus 39 ~~al~~~~~----~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~ 87 (133)
T 3b2n_A 39 LDAMKLIEE----YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK 87 (133)
T ss_dssp HHHHHHHHH----HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHhh----cCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCC
No 314
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=35.32 E-value=58 Score=24.77 Aligned_cols=35 Identities=9% Similarity=0.063 Sum_probs=23.9
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccchH
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAPA 143 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~~ 143 (460)
.+||+||.|.... .+..+.+.+ .+|+|+++.....
T Consensus 57 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~ 98 (153)
T 3hv2_A 57 REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDL 98 (153)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCH
T ss_pred CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCH
Confidence 7899999997654 344444332 6899988766543
No 315
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=35.31 E-value=69 Score=31.09 Aligned_cols=101 Identities=9% Similarity=0.105 Sum_probs=56.9
Q ss_pred CCC-CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcC--CCCCCCC---
Q 012594 1 MDR-EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIP--DGLESHE--- 74 (460)
Q Consensus 1 m~~-~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~--- 74 (460)
|+. ..++++...- =.-++.+|+.|.+.|+++. +|......+++. |+....+. .++++..
T Consensus 1 ~~~~~G~aLISV~D----K~~iv~lAk~L~~lGf~I~--ATgGTAk~L~e~---------GI~v~~V~k~TgfPE~l~GR 65 (593)
T 1g8m_A 1 MAARQQLALLSVSE----KAGLVEFARSLNALGLGLI--ASGGTATALRDA---------GLPVRDVSDLTGFPEMLGGR 65 (593)
T ss_dssp ---CCCEEEEEESC----CTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEEHHHHHSCCCBGGGT
T ss_pred CCCCCCEEEEEEeC----cHhHHHHHHHHHHCCCEEE--EchHHHHHHHHC---------CCeEEEeecccCCchhhcCC
Confidence 443 3455554433 3447899999999998875 688889999888 67766663 2233221
Q ss_pred cCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcc
Q 012594 75 ADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVG 121 (460)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~ 121 (460)
..+-++...-..+.+......+++ ++..= ...|+||++.+-+
T Consensus 66 VKTLHP~ihgGiLar~~~~h~~~l-~~~~I----~~iDlVvvNLYPF 107 (593)
T 1g8m_A 66 VKTLHPAVHAGILARNIPEDNADM-NKQDF----SLVRVVVCNLYPF 107 (593)
T ss_dssp BSSCSHHHHHHHHCCSSHHHHHHH-HHTTC----CCEEEEEEECCCH
T ss_pred ccccCchhhhhhccCCCHHHHHHH-HHcCC----CceeEEEEeccCH
Confidence 134444444334332222333333 33222 6789999996544
No 316
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=35.19 E-value=17 Score=30.50 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=24.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVS 39 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~ 39 (460)
++||.|+-.|..| ..+|+.|+++||+|+++.
T Consensus 23 mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~ 53 (220)
T 4huj_A 23 MTTYAIIGAGAIG-----SALAERFTAAQIPAIIAN 53 (220)
T ss_dssp SCCEEEEECHHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEE
Confidence 4689998766655 468889999999999844
No 317
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=35.04 E-value=40 Score=29.71 Aligned_cols=37 Identities=5% Similarity=0.123 Sum_probs=27.9
Q ss_pred CEEEEEcCCCccC---hHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGH---AGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH---~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+||+|+..+.... ......++++|.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 3899998774321 234567999999999999998764
No 318
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=34.98 E-value=23 Score=32.52 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
..+|+|+-.|..| +.+|..|+++|++|+++-..
T Consensus 5 ~~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 5 KSEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp BCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4678988877555 77899999999999998654
No 319
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=34.95 E-value=46 Score=29.24 Aligned_cols=38 Identities=21% Similarity=0.345 Sum_probs=29.4
Q ss_pred CCCEEEEEcCCCccChHHH--HHHHHHHHhCC-CEEEEEeCc
Q 012594 3 REPHVLVIPFPAQGHAGPL--MKLSTKIAEHG-IKVTFVSTE 41 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~--~~La~~L~~rG-h~V~~~~~~ 41 (460)
++.|||+++ +..+|-.+. ..|++.|.+.| .+|++...+
T Consensus 3 ~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 567999995 555887554 57788888888 999999764
No 320
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=34.74 E-value=43 Score=28.66 Aligned_cols=34 Identities=15% Similarity=0.273 Sum_probs=24.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| + -.++++.|+++|++|+++....
T Consensus 3 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~~ 36 (256)
T 1geg_A 3 KVALVTGAGQG-I--GKAIALRLVKDGFAVAIADYND 36 (256)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCCH
Confidence 56777755432 2 3578999999999999887643
No 321
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=34.72 E-value=17 Score=37.15 Aligned_cols=110 Identities=10% Similarity=0.010 Sum_probs=73.8
Q ss_pred eccCchhhcCCCcccceeeccChhhhhHhhhcCCceeeccccchhhhhHHHHHhhhcceeEeecCC----CCccCHHHHH
Q 012594 336 EWAPQEKVLGHPSVACFLSHCGWNSTLEGLSMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDE----NGIITRQEIQ 411 (460)
Q Consensus 336 ~~~p~~~ll~~~~~~~~I~hgG~~sv~eal~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~----~~~~~~~~l~ 411 (460)
++.+-.++|..+++ +||- =++.+.|.+..++|+|.+....|+... .. -|..++..+ .-..+.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~----~~---rg~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDK----GL---RGFYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTS----SC---CSBSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhh----cc---CCcccChhHhCCCCeECCHHHHH
Confidence 45566678866665 9998 456789999999999999887777533 11 223332110 1124788999
Q ss_pred HHHHHHhcC-hHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHH
Q 012594 412 RQVKALLND-GGIKANALKMKQMARKSLVEGGSSFRNFESFVSQLK 456 (460)
Q Consensus 412 ~~i~~~l~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~ 456 (460)
++|+....+ ..|+++.++..+++... ..|.++.+-++.+++...
T Consensus 675 ~~i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 999888753 57888888888888753 345666666666665544
No 322
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=34.65 E-value=37 Score=30.23 Aligned_cols=40 Identities=18% Similarity=0.066 Sum_probs=31.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc-chhHHhhc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH-MHAKITAS 50 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~-~~~~~~~~ 50 (460)
+||+|+-.|+.|- .+|..|+ +||+|+++.... ..+.+.+.
T Consensus 3 mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 3 LKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp CEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 5999998887774 5688888 999999998765 34566665
No 323
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=34.62 E-value=45 Score=26.41 Aligned_cols=38 Identities=13% Similarity=0.331 Sum_probs=30.2
Q ss_pred CCEEEEEcCC---CccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFP---AQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~---~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
..+|+|+|.= ..--.++...|++.|.++|.+|.|+.+|
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 3478888852 2234678999999999999999999886
No 324
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=34.53 E-value=35 Score=24.66 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=23.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCC-CEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHG-IKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rG-h~V~~~~~~~ 42 (460)
++|+++-. |.+- ..+++.|.++| |+|+++....
T Consensus 6 ~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCCH
Confidence 47777743 4332 46788999999 9998887643
No 325
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=34.50 E-value=55 Score=24.33 Aligned_cols=34 Identities=3% Similarity=0.046 Sum_probs=23.9
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh----CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM----GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l----giP~v~~~~~~~ 142 (460)
.+||+||.|...+ .+..+++.+ .+|+|.++....
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~ 86 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINE 86 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCC
Confidence 7899999997654 455555544 688888876544
No 326
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=34.49 E-value=61 Score=24.13 Aligned_cols=41 Identities=20% Similarity=0.292 Sum_probs=0.0
Q ss_pred HHHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHh-----CCceEEEccc
Q 012594 95 LRNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQM-----GIARAAVIPY 140 (460)
Q Consensus 95 ~~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~ 140 (460)
..+.++.+.. .+||+||.|. .. .+..+.+.+ ++|+|.++..
T Consensus 37 ~~~a~~~l~~----~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 37 EQEAFTFLRR----EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp HHHHHHHHTT----SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHHhc----cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
No 327
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=34.29 E-value=1.8e+02 Score=23.39 Aligned_cols=145 Identities=13% Similarity=0.168 Sum_probs=81.1
Q ss_pred cEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccce
Q 012594 273 SVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACF 352 (460)
Q Consensus 273 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~ 352 (460)
+.|-|-+|| ..+....++....++.++..+-..+.+. ...|+.+.+ |+.+ ...-.++.+
T Consensus 22 ~~V~IimGS--~SD~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~---a~~~g~~Vi 80 (182)
T 1u11_A 22 PVVGIIMGS--QSDWETMRHADALLTELEIPHETLIVSA------HRTPDRLAD----------YART---AAERGLNVI 80 (182)
T ss_dssp CSEEEEESS--GGGHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHH---TTTTTCCEE
T ss_pred CEEEEEECc--HHHHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHH----------HHHH---HHhCCCcEE
Confidence 356677777 3367778888888999998875555433 234444221 1111 011113347
Q ss_pred eeccCh----hhhhHhhhcCCceeeccccch--hhhhH-HHHHh--hhcceeE-eecCCCCccCHHHHHHHHHHHhcChH
Q 012594 353 LSHCGW----NSTLEGLSMGVPFLCWPYFAD--QYQNR-NYIFD--AWKIGLR-FFPDENGIITRQEIQRQVKALLNDGG 422 (460)
Q Consensus 353 I~hgG~----~sv~eal~~GvP~i~~P~~~d--Q~~~a-~~v~~--~lg~g~~-~~~~~~~~~~~~~l~~~i~~~l~~~~ 422 (460)
|.-.|. .++..++ .-+|+|.+|.... ....+ .-+.. . |+.+. +..++.+..++.-++..|. -+.|++
T Consensus 81 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~~ 157 (182)
T 1u11_A 81 IAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNPA 157 (182)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCHH
T ss_pred EEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCHH
Confidence 766664 3444444 4799999998542 11111 11111 2 55532 2220002346666666664 456899
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q 012594 423 IKANALKMKQMARKSLVEG 441 (460)
Q Consensus 423 ~~~~a~~l~~~~~~~~~~~ 441 (460)
++++.+..+++.++.+.+.
T Consensus 158 l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 158 LAARLETWRALQTASVPNS 176 (182)
T ss_dssp HHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999988765443
No 328
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=34.13 E-value=2.3e+02 Score=24.50 Aligned_cols=92 Identities=9% Similarity=0.051 Sum_probs=48.9
Q ss_pred HHHHHHHHHhCC-CEEEEEeCccc------hhHHhhccCccccCCCCeEEEEcCC-CCCCCCcCcccHHHHHHHHHhhch
Q 012594 21 LMKLSTKIAEHG-IKVTFVSTEHM------HAKITASMPQKAEQSSLITMVSIPD-GLESHEADRRDLHKVRQSMLTVMP 92 (460)
Q Consensus 21 ~~~La~~L~~rG-h~V~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~ 92 (460)
..+++..++..| .+|-++++... .+.+++. |+++..... +... . .+ ....-.
T Consensus 134 ~~A~~~al~~~g~~rvgvltp~~~~~~~~~~~~l~~~---------Gi~v~~~~~~~~~~-------~---~~-~g~~~~ 193 (273)
T 2xed_A 134 AGALVEGLRALDAQRVALVTPYMRPLAEKVVAYLEAE---------GFTISDWRALEVAD-------N---TE-VGCIPG 193 (273)
T ss_dssp HHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHHHT---------TCEEEEEEECCCCB-------H---HH-HHTCCH
T ss_pred HHHHHHHHHHcCCCeEEEEcCChhhhHHHHHHHHHHC---------CCEEeccccCCCcc-------c---hh-hcccCH
Confidence 345566776677 78999975432 2333333 666544321 1110 0 01 111123
Q ss_pred HHHHHHHHHHhhcCCCCCccEEEeC---CCcc--hHHHHHHHhCCceEE
Q 012594 93 GCLRNLIEKVNKSNDCEKISCVIAD---LTVG--WALEVAEQMGIARAA 136 (460)
Q Consensus 93 ~~~~~~l~~l~~~~~~~~~D~vv~D---~~~~--~~~~~A~~lgiP~v~ 136 (460)
..+.+.++.+.. ...|.||.. .+.. ....+.+.+|+|++.
T Consensus 194 ~~l~~~~~~l~~----~gadaIvLg~CT~l~~~~~~~~le~~lg~PVid 238 (273)
T 2xed_A 194 EQVMAAARSLDL----SEVDALVISCAVQMPSLPLVETAEREFGIPVLS 238 (273)
T ss_dssp HHHHHHHHHSCC----TTCSEEEEESSSSSCCTTHHHHHHHHHSSCEEE
T ss_pred HHHHHHHHHHhh----CCCCEEEEcCCCCcchHHhHHHHHHHhCCCEEc
Confidence 345566666544 678988877 3333 234456678999863
No 329
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=34.13 E-value=40 Score=32.26 Aligned_cols=37 Identities=14% Similarity=0.058 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCCCccChHHHHHHHHHHHhC-CC-EEEEEeCccc
Q 012594 2 DREPHVLVIPFPAQGHAGPLMKLSTKIAEH-GI-KVTFVSTEHM 43 (460)
Q Consensus 2 ~~~~~Il~~~~~~~gH~~p~~~La~~L~~r-Gh-~V~~~~~~~~ 43 (460)
.+.+||.|+-.|..| ..+|..|+++ || +|+++-....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 345799999888888 5789999999 99 9999876543
No 330
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=33.91 E-value=67 Score=23.60 Aligned_cols=41 Identities=17% Similarity=0.275 Sum_probs=0.0
Q ss_pred HHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHh-----CCceEEEccc
Q 012594 96 RNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQM-----GIARAAVIPY 140 (460)
Q Consensus 96 ~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~ 140 (460)
.+.++.+.. .+||+||.|.... .+..+++.+ ++|++.++..
T Consensus 37 ~~al~~~~~----~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (132)
T 3crn_A 37 GEGLAKIEN----EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGY 84 (132)
T ss_dssp HHHHHHHHH----SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESC
T ss_pred HHHHHHHhc----CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEecc
No 331
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=33.89 E-value=72 Score=22.88 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=23.4
Q ss_pred CCccEEEeCCCcc--hHHHHHHH----hCCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQ----MGIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 142 (460)
.+||+||.|...+ .+..+++. -.+|.+.++....
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 7899999997654 34444443 3688888876544
No 332
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=33.84 E-value=1.1e+02 Score=22.93 Aligned_cols=64 Identities=9% Similarity=-0.027 Sum_probs=37.8
Q ss_pred hcCCceeeccccchhhhhHHHHHhhhc-ceeEeecCCCCccCHHHHHHHHHHHhcChHH-HHHHHHHHHHHH
Q 012594 366 SMGVPFLCWPYFADQYQNRNYIFDAWK-IGLRFFPDENGIITRQEIQRQVKALLNDGGI-KANALKMKQMAR 435 (460)
Q Consensus 366 ~~GvP~i~~P~~~dQ~~~a~~v~~~lg-~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~-~~~a~~l~~~~~ 435 (460)
...+|+|++--..|.......+ + .| +--.+. +.++.+.|.++|++++....+ +++-+.+++.+.
T Consensus 74 ~~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~----KP~~~~~L~~~i~~~l~~~~~~~~~~~~~~~~~~ 139 (151)
T 3kcn_A 74 SPNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLN----KPCQMSDIKAAINAGIKQYDLVTSKEELLKKTFA 139 (151)
T ss_dssp CSSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4577888776555554444443 3 37 533343 568999999999999975543 333333333333
No 333
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=33.79 E-value=47 Score=26.41 Aligned_cols=37 Identities=24% Similarity=0.319 Sum_probs=29.8
Q ss_pred CEEEEEcCC---CccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFP---AQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~---~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.+|+|+|.= ..--..+...|++.|.++|.+|.|+.+|
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 478888852 2234678999999999999999999886
No 334
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=33.72 E-value=34 Score=28.71 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=24.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++++.|+++|++|.++....
T Consensus 2 k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~~ 35 (230)
T 3guy_A 2 SLIVITGASSG---LGAELAKLYDAEGKATYLTGRSE 35 (230)
T ss_dssp -CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 46667755532 33688999999999999887643
No 335
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=33.71 E-value=88 Score=21.47 Aligned_cols=48 Identities=4% Similarity=0.068 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhcCh-------HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHhc
Q 012594 407 RQEIQRQVKALLNDG-------GIKANALKMKQMARKSLVEGGSSFRNFESFVSQLKAI 458 (460)
Q Consensus 407 ~~~l~~~i~~~l~~~-------~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 458 (460)
-++|.+++.++-.|| +|+....++.-.... .....++++++...+.++
T Consensus 27 ~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~eysl~rNa----qSttiKa~KDi~~sI~~~ 81 (85)
T 2ca5_A 27 QGELTLALDKLAKNPSNPQLLAEYQSKLSEYTLYRNA----QSNTVKVIKDVDAAILEH 81 (85)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHh
Confidence 366777777777666 577777777655443 557788888888888775
No 336
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=33.70 E-value=61 Score=24.26 Aligned_cols=32 Identities=9% Similarity=0.211 Sum_probs=21.8
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEccc
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPY 140 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~ 140 (460)
.+||+||.|...+ .+..+++.+ ++|+|.++..
T Consensus 48 ~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~ 86 (141)
T 3cu5_A 48 HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGY 86 (141)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCS
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCC
Confidence 7799999997654 455444433 5788877654
No 337
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=33.68 E-value=55 Score=27.94 Aligned_cols=35 Identities=11% Similarity=0.003 Sum_probs=26.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 477888866543 34689999999999999887643
No 338
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=33.52 E-value=60 Score=28.46 Aligned_cols=37 Identities=14% Similarity=0.051 Sum_probs=27.0
Q ss_pred CEEEEEcCCCc-cChH---HHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQ-GHAG---PLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~-gH~~---p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 48988875533 2222 3457999999999999998765
No 339
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=33.47 E-value=15 Score=33.59 Aligned_cols=37 Identities=16% Similarity=0.243 Sum_probs=31.1
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 7 VLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 7 Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
++++-.++.|-..-++.++..++..|..|.|+.++..
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s 100 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHA 100 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 4566667899999999999999999999999988764
No 340
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=33.46 E-value=56 Score=27.75 Aligned_cols=32 Identities=13% Similarity=0.042 Sum_probs=22.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|+++++.++. - --.++++.|+++|++|+++..
T Consensus 2 k~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCAT-G--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 4566664443 2 245789999999999998765
No 341
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=33.39 E-value=57 Score=28.82 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=26.2
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVS 39 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~ 39 (460)
|.+++||+++... .......+.|.+.||+|.+..
T Consensus 4 ~~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 4 MLTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred cccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 6677899888532 356677899999999998764
No 342
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=33.34 E-value=47 Score=28.72 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=24.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|+++++.++.| --.++++.|+++|++|+++..
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 57777765543 346789999999999999876
No 343
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=33.23 E-value=51 Score=23.86 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=23.1
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 142 (460)
.+||+||.|...+ .+..+++.+ .+|++.++....
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (124)
T 1srr_A 46 ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGE 86 (124)
T ss_dssp HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCc
Confidence 6799999997554 344444433 689988876544
No 344
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=33.21 E-value=1.3e+02 Score=24.76 Aligned_cols=35 Identities=14% Similarity=0.052 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCc--cChHHHHHHHHHHHhCCCEEEEE
Q 012594 4 EPHVLVIPFPAQ--GHAGPLMKLSTKIAEHGIKVTFV 38 (460)
Q Consensus 4 ~~~Il~~~~~~~--gH~~p~~~La~~L~~rGh~V~~~ 38 (460)
..||+|+|..+. .+-.-...+.+.|.+.|.+|.++
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 358888887654 33334556677788888887776
No 345
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=33.06 E-value=25 Score=33.03 Aligned_cols=35 Identities=26% Similarity=0.375 Sum_probs=23.3
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCC--CEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHG--IKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rG--h~V~~~~~~~ 42 (460)
|++ ||+|+-.|..| +..|..|+++| ++||++...+
T Consensus 1 M~K--~VvIIGgG~aG-----l~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 1 MAK--HVVVIGGGVGG-----IATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp -CC--EEEEECSSHHH-----HHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCC--cEEEECCCHHH-----HHHHHHHhccCcCCeEEEEcCCC
Confidence 776 89888754333 34566666654 9999998765
No 346
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=32.91 E-value=62 Score=23.04 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=23.3
Q ss_pred CCccEEEeCCCcc--hHHHHHHH----hCCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQ----MGIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 142 (460)
.+||+||.|...+ .+..+++. -.+|.+.++....
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 6799999997654 34444433 4689998876554
No 347
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=32.82 E-value=66 Score=27.60 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=24.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++. - --.++++.|+++||+|+++...
T Consensus 8 k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAAQ-G--IGRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC-c--HHHHHHHHHHHCCCEEEEEECC
Confidence 5667775543 2 2357899999999999988754
No 348
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=32.78 E-value=36 Score=29.86 Aligned_cols=32 Identities=13% Similarity=0.195 Sum_probs=26.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
||.|+-.|..|. .+|+.|+++||+|++.....
T Consensus 3 ~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGG-----PMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHH-----HHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHH-----HHHHHHHHCCCeEEEEcCCH
Confidence 799998887774 57889999999999986543
No 349
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=32.70 E-value=88 Score=22.43 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=28.8
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCC
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPD 311 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 311 (460)
.||+-|.| +++.+++++..++..|.+++..+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57777755 88999999999999999999888765
No 350
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=32.66 E-value=82 Score=23.47 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=0.0
Q ss_pred HHHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHh-------CCceEEEccc
Q 012594 95 LRNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQM-------GIARAAVIPY 140 (460)
Q Consensus 95 ~~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~ 140 (460)
..+.++.+.. .+||+||.|.... .+..+.+.+ ++|+|.++..
T Consensus 40 ~~~a~~~l~~----~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 40 GAKALYQVQQ----AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHHHHTT----CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHHHHhhc----CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
No 351
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=32.58 E-value=87 Score=28.16 Aligned_cols=82 Identities=10% Similarity=-0.091 Sum_probs=46.2
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCccccee
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFL 353 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I 353 (460)
.|+++-.+......+.+..+.+.++..+..+.+..... +.... .. -..... ...+++|
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~---------~~~a~----------~~-~~~~~~--~~~d~vv 85 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK---------IGDAT----------LE-AERAMH--ENYDVLI 85 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS---------TTHHH----------HH-HHHHTT--TTCSEEE
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC---------cchHH----------HH-HHHHhh--cCCCEEE
Confidence 35555444322234556778888887776655443322 01100 00 011111 2345599
Q ss_pred eccChhhhhHhhh------cCCceeecccc
Q 012594 354 SHCGWNSTLEGLS------MGVPFLCWPYF 377 (460)
Q Consensus 354 ~hgG~~sv~eal~------~GvP~i~~P~~ 377 (460)
.-||-||+.|++. .++|+.++|..
T Consensus 86 v~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 86 AAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred EEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 9999999998853 57899999974
No 352
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=32.57 E-value=35 Score=30.63 Aligned_cols=31 Identities=26% Similarity=0.273 Sum_probs=24.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|||.|+-.|..| ..+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 378888777666 3568889999999999876
No 353
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=32.54 E-value=40 Score=29.47 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=30.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|.|..-|+-|-..-...||..|+++|++|.++=.+.
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 4556556789999999999999999999999985544
No 354
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=32.40 E-value=1.1e+02 Score=24.88 Aligned_cols=39 Identities=8% Similarity=0.090 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.++||+|+..++..- .-+....+.|.+.|++|++++...
T Consensus 22 ~~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 22 LSKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 345899998876553 345567778888999999998764
No 355
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=32.37 E-value=1.6e+02 Score=25.01 Aligned_cols=29 Identities=7% Similarity=-0.105 Sum_probs=18.9
Q ss_pred CCccEEEeCCCcchH-HHHHHHhCCceEEE
Q 012594 109 EKISCVIADLTVGWA-LEVAEQMGIARAAV 137 (460)
Q Consensus 109 ~~~D~vv~D~~~~~~-~~~A~~lgiP~v~~ 137 (460)
.++|.||.-=++..+ ..+.+.+++|++.+
T Consensus 68 ~g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 68 QGVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HTCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred CCCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 578988865444433 44556679999864
No 356
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=32.20 E-value=42 Score=30.23 Aligned_cols=62 Identities=6% Similarity=0.158 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhh
Q 012594 286 SQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGL 365 (460)
Q Consensus 286 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal 365 (460)
+.+....+.+++.....+.||...++.. -.++.++++...+-.+|+. ||-..-..++.-++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al 123 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFN-----------------SNQLLPYLDYDLISENPKI--LCGFSDITALATAI 123 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchh-----------------HHHHhhhcchhhhccCCeE--EEecccccHHHHHH
Confidence 4567788999999888888988766511 1224445555555555544 55555555555554
Q ss_pred h
Q 012594 366 S 366 (460)
Q Consensus 366 ~ 366 (460)
+
T Consensus 124 ~ 124 (327)
T 4h1h_A 124 Y 124 (327)
T ss_dssp H
T ss_pred H
Confidence 3
No 357
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=32.20 E-value=82 Score=22.42 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=23.2
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 142 (460)
.+||++|.|...+ .+..+.+.+ .+|++.++....
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 83 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARES 83 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCC
Confidence 7899999997654 344444432 588988876554
No 358
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=32.13 E-value=63 Score=27.38 Aligned_cols=30 Identities=13% Similarity=0.016 Sum_probs=23.2
Q ss_pred CCccEEEeCCCcc-------hHHHHHHHhCCceEEEc
Q 012594 109 EKISCVIADLTVG-------WALEVAEQMGIARAAVI 138 (460)
Q Consensus 109 ~~~D~vv~D~~~~-------~~~~~A~~lgiP~v~~~ 138 (460)
.+||++++|..-. -|..+.-.+++|.|.+.
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 5799999997544 45667778899999765
No 359
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=32.11 E-value=1e+02 Score=24.87 Aligned_cols=36 Identities=25% Similarity=0.286 Sum_probs=27.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
||+|+..++.. ..=+....+.|.+.|++|++++...
T Consensus 7 kv~ill~~g~~-~~e~~~~~~~l~~ag~~v~~~s~~~ 42 (190)
T 4e08_A 7 SALVILAPGAE-EMEFIIAADVLRRAGIKVTVAGLNG 42 (190)
T ss_dssp EEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEEECCCch-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 78888776553 4445566788889999999999864
No 360
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=32.10 E-value=49 Score=26.42 Aligned_cols=43 Identities=16% Similarity=0.263 Sum_probs=27.6
Q ss_pred HHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccchH
Q 012594 97 NLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAPA 143 (460)
Q Consensus 97 ~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~~ 143 (460)
+.++.+.. .+||+||.|...+ .+..+++.+ .+|+|+++.....
T Consensus 42 ~al~~~~~----~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~~ 91 (184)
T 3rqi_A 42 EALKLAGA----EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYASI 91 (184)
T ss_dssp HHHHHHTT----SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCCH
T ss_pred HHHHHHhh----CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCCH
Confidence 33444444 7899999997655 344444332 6899988766543
No 361
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=31.99 E-value=64 Score=24.64 Aligned_cols=42 Identities=7% Similarity=-0.047 Sum_probs=28.6
Q ss_pred EEEE-EcCCCccChHHH--HHHHHHHHhCCCEEEEEeCccchhHH
Q 012594 6 HVLV-IPFPAQGHAGPL--MKLSTKIAEHGIKVTFVSTEHMHAKI 47 (460)
Q Consensus 6 ~Il~-~~~~~~gH~~p~--~~La~~L~~rGh~V~~~~~~~~~~~~ 47 (460)
|++| +..+-+|+.... +.+|..++..||+|.++-...-....
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~ 51 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQL 51 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHH
Confidence 5664 445566765554 66688888999999998765544333
No 362
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.78 E-value=62 Score=27.72 Aligned_cols=34 Identities=18% Similarity=0.298 Sum_probs=25.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEECCH
Confidence 67788866543 34678999999999998887643
No 363
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=31.76 E-value=35 Score=30.48 Aligned_cols=33 Identities=9% Similarity=0.160 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCC-EEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGI-KVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh-~V~~~~~~ 41 (460)
++||.|+-.|..| ..+|+.|+++|| +|++....
T Consensus 24 ~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcCC
Confidence 4689999877666 478999999999 99988763
No 364
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=31.71 E-value=81 Score=27.30 Aligned_cols=36 Identities=8% Similarity=0.160 Sum_probs=26.2
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 6 HVLVIPFPAQ-GHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 6 ~Il~~~~~~~-gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
|+++++.++. +=+ -.++|+.|+++|++|.++.....
T Consensus 27 k~vlVTGasg~~GI--G~~ia~~l~~~G~~V~~~~r~~~ 63 (280)
T 3nrc_A 27 KKILITGLLSNKSI--AYGIAKAMHREGAELAFTYVGQF 63 (280)
T ss_dssp CEEEECCCCSTTCH--HHHHHHHHHHTTCEEEEEECTTC
T ss_pred CEEEEECCCCCCCH--HHHHHHHHHHcCCEEEEeeCchH
Confidence 6788886441 112 36789999999999999877653
No 365
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=31.69 E-value=46 Score=28.10 Aligned_cols=35 Identities=17% Similarity=0.053 Sum_probs=28.2
Q ss_pred CCEEEEEc-C-CCccChHHHHHHHHHHHhCCCEEEEE
Q 012594 4 EPHVLVIP-F-PAQGHAGPLMKLSTKIAEHGIKVTFV 38 (460)
Q Consensus 4 ~~~Il~~~-~-~~~gH~~p~~~La~~L~~rGh~V~~~ 38 (460)
++|.+|++ . ...|-..-...|++.|+++|++|.+.
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~ 39 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCL 39 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEe
Confidence 34544444 3 47899999999999999999999996
No 366
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=31.67 E-value=54 Score=23.85 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=21.5
Q ss_pred CCccEEEeCCCcc--hHHHHHHH-------hCCceEEEcccc
Q 012594 109 EKISCVIADLTVG--WALEVAEQ-------MGIARAAVIPYA 141 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 141 (460)
.+||+||.|.... .+..+++. -++|+|.++...
T Consensus 46 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 87 (127)
T 3i42_A 46 RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFA 87 (127)
T ss_dssp SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCc
Confidence 7899999997554 44444432 357888776543
No 367
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=31.57 E-value=52 Score=26.71 Aligned_cols=37 Identities=14% Similarity=0.340 Sum_probs=29.5
Q ss_pred CEEEEEcCC---CccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFP---AQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~---~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.+|+|+|.- ..--.++...|++.|.++|.+|.|+.+|
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 378888853 2234678899999999999999999886
No 368
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=31.47 E-value=56 Score=27.53 Aligned_cols=34 Identities=15% Similarity=0.223 Sum_probs=25.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++++.|+++|++|.++....
T Consensus 4 k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r~~ 37 (235)
T 3l6e_A 4 GHIIVTGAGSG---LGRALTIGLVERGHQVSMMGRRY 37 (235)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECCH
Confidence 56777765543 34588999999999999887643
No 369
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=31.38 E-value=60 Score=27.73 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=25.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++++.|+++|++|+++....
T Consensus 5 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~~ 38 (260)
T 1x1t_A 5 KVAVVTGSTSG---IGLGIATALAAQGADIVLNGFGD 38 (260)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEECCSC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHcCCEEEEEeCCc
Confidence 56777765543 34688999999999999886543
No 370
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=31.28 E-value=2.3e+02 Score=23.67 Aligned_cols=143 Identities=10% Similarity=0.036 Sum_probs=69.7
Q ss_pred CCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhh-hCCCcEEeeccCchhhcCCCcc
Q 012594 271 VGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVER-VSDRGKLVEWAPQEKVLGHPSV 349 (460)
Q Consensus 271 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~ll~~~~~ 349 (460)
+++++.|..|..+ ...++.|.+.+.++.++.... .+.+... ...++.+....-....|.. +
T Consensus 31 gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~---------~~~l~~l~~~~~i~~i~~~~~~~dL~~--a 92 (223)
T 3dfz_A 31 GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV---------SAEINEWEAKGQLRVKRKKVGEEDLLN--V 92 (223)
T ss_dssp TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC---------CHHHHHHHHTTSCEEECSCCCGGGSSS--C
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC---------CHHHHHHHHcCCcEEEECCCCHhHhCC--C
Confidence 3558888777432 334455666687776554321 1222211 1234554422223345544 4
Q ss_pred cceeeccChhhhhHhhh----cCCceeeccccchhhhhH-----HHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcC
Q 012594 350 ACFLSHCGWNSTLEGLS----MGVPFLCWPYFADQYQNR-----NYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLND 420 (460)
Q Consensus 350 ~~~I~hgG~~sv~eal~----~GvP~i~~P~~~dQ~~~a-----~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 420 (460)
+++|.--|.-.+.+.++ .|+|+-++ |.+..+ ..+.+. ++-+.+........-+..|++.|++.+-.
T Consensus 93 dLVIaAT~d~~~N~~I~~~ak~gi~VNvv----D~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp~ 167 (223)
T 3dfz_A 93 FFIVVATNDQAVNKFVKQHIKNDQLVNMA----SSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYDE 167 (223)
T ss_dssp SEEEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSCT
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCEEEEe----CCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHccH
Confidence 44888877655544433 57776554 443332 122221 33333332112233456777888777743
Q ss_pred h--HHHHHHHHHHHHHHH
Q 012594 421 G--GIKANALKMKQMARK 436 (460)
Q Consensus 421 ~--~~~~~a~~l~~~~~~ 436 (460)
. .+-+.+.++.+++++
T Consensus 168 ~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 168 SYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 2 456666666666665
No 371
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=31.28 E-value=40 Score=30.55 Aligned_cols=72 Identities=15% Similarity=0.233 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccceeeccChhhhhHhh
Q 012594 286 SQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACFLSHCGWNSTLEGL 365 (460)
Q Consensus 286 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~I~hgG~~sv~eal 365 (460)
+.+....+.+++.....+.||.+.++.. -.++.+++++..|-++|+. ||-+.-...+.-++
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------------~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 124 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMN-----------------SNSLLPYIDYDAFQNNPKI--MIGYSDATALLLGI 124 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------------GGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-----------------HHHHhhhcChhHHhhCCeE--EEEechHHHHHHHH
Confidence 5567788999998888888888776511 1234455555555555655 66666666666666
Q ss_pred h--cCCceeeccc
Q 012594 366 S--MGVPFLCWPY 376 (460)
Q Consensus 366 ~--~GvP~i~~P~ 376 (460)
+ .|++.+--|.
T Consensus 125 ~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 125 YAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHCCCEEECCC
T ss_pred HHhcCceEEECCh
Confidence 5 3666555554
No 372
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=31.26 E-value=69 Score=23.27 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=22.9
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-------CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-------GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~~ 142 (460)
.+||+||.|...+ .+..+++.+ ++|++.++....
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~ 92 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQGD 92 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSCCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCCCC
Confidence 7899999997654 455555544 467777665543
No 373
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=31.20 E-value=43 Score=30.78 Aligned_cols=40 Identities=13% Similarity=0.073 Sum_probs=28.8
Q ss_pred CCCCCEEEEEcCCCccCh----HHHHHHHHHH-HhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHA----GPLMKLSTKI-AEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~----~p~~~La~~L-~~rGh~V~~~~~~ 41 (460)
|. ++||+++..|-.+-. .....+.++| .++||+|+.+-..
T Consensus 1 m~-k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MT-KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp ---CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CC-CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 53 578988876655532 3467889999 9999999998643
No 374
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=31.20 E-value=63 Score=29.47 Aligned_cols=27 Identities=26% Similarity=0.423 Sum_probs=20.9
Q ss_pred CCcccceeeccChhhh---hHhhhcCCceeec
Q 012594 346 HPSVACFLSHCGWNST---LEGLSMGVPFLCW 374 (460)
Q Consensus 346 ~~~~~~~I~hgG~~sv---~eal~~GvP~i~~ 374 (460)
.|++ +|++||.-++ ..|-..|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 4555 9999998765 5677789999864
No 375
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=31.17 E-value=1.5e+02 Score=25.66 Aligned_cols=39 Identities=10% Similarity=0.147 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHhhcCCCCCccEEEeCCCc---chHHHHHHHhCCceEE
Q 012594 92 PGCLRNLIEKVNKSNDCEKISCVIADLTV---GWALEVAEQMGIARAA 136 (460)
Q Consensus 92 ~~~~~~~l~~l~~~~~~~~~D~vv~D~~~---~~~~~~A~~lgiP~v~ 136 (460)
...++.+++.+++ -.+++.|..+ +.+..+|+.+|+|++.
T Consensus 141 ~~~M~~vm~~L~~------~gL~FlDS~Ts~~S~a~~~A~~~gvp~~~ 182 (261)
T 2qv5_A 141 QSALEPVMRDIGK------RGLLFLDDGSSAQSLSGGIAKAISAPQGF 182 (261)
T ss_dssp HHHHHHHHHHHHH------TTCEEEECSCCTTCCHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHH------CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 4566777777765 4799999987 4788999999999995
No 376
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=31.10 E-value=65 Score=27.54 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=24.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++++.|+++|++|.++...
T Consensus 6 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 38 (260)
T 2qq5_A 6 QVCVVTGASRG---IGRGIALQLCKAGATVYITGRH 38 (260)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67788865543 2357899999999999987654
No 377
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=31.10 E-value=19 Score=31.66 Aligned_cols=28 Identities=18% Similarity=0.081 Sum_probs=22.4
Q ss_pred ccceeeccChhhhhHhhhc--C-Cceeeccc
Q 012594 349 VACFLSHCGWNSTLEGLSM--G-VPFLCWPY 376 (460)
Q Consensus 349 ~~~~I~hgG~~sv~eal~~--G-vP~i~~P~ 376 (460)
++++|+=||-||++.+... + +|++.+..
T Consensus 69 ~DlvIvlGGDGT~L~aa~~~~~~~PilGIN~ 99 (278)
T 1z0s_A 69 FDFIVSVGGDGTILRILQKLKRCPPIFGINT 99 (278)
T ss_dssp SSEEEEEECHHHHHHHHTTCSSCCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHhCCCCcEEEECC
Confidence 4459999999999998765 3 88888843
No 378
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=31.06 E-value=41 Score=29.43 Aligned_cols=32 Identities=13% Similarity=0.247 Sum_probs=25.1
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPF-PAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~-~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+||.|+-. |..| ..+|+.|+++||+|+++...
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECCS
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 48999877 6665 45788899999999977543
No 379
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=30.94 E-value=99 Score=25.35 Aligned_cols=36 Identities=25% Similarity=0.238 Sum_probs=28.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
||+|+..++. ...-+....+.|.+.|++|++++...
T Consensus 4 kV~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (205)
T 2ab0_A 4 SALVCLAPGS-EETEAVTTIDLLVRGGIKVTTASVAS 39 (205)
T ss_dssp EEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEEEcCCC-cHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 8888887765 34556667788999999999998754
No 380
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=30.93 E-value=57 Score=28.63 Aligned_cols=35 Identities=14% Similarity=0.258 Sum_probs=26.7
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 12 ~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 12 RRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 367888866643 34588999999999999987654
No 381
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=30.91 E-value=57 Score=23.47 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=20.7
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-------CCceEEEcccc
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-------GIARAAVIPYA 141 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 141 (460)
.+||+||.|...+ .+..+++.+ .+|++.++...
T Consensus 44 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 85 (124)
T 1mb3_A 44 NKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFA 85 (124)
T ss_dssp HCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC---
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCC
Confidence 6799999997654 444444432 57888876543
No 382
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=30.89 E-value=48 Score=28.52 Aligned_cols=41 Identities=15% Similarity=0.290 Sum_probs=32.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|.+++.|++...++.|--.-...|++.|.+.|..+.++..+
T Consensus 1 M~~~~lIvl~G~pGSGKSTla~~La~~L~~~g~~~i~~~~D 41 (260)
T 3a4m_A 1 MGDIMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSD 41 (260)
T ss_dssp --CCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEECTH
T ss_pred CCCCEEEEEEcCCCCCHHHHHHHHHHHHHhCCCEEEEECch
Confidence 66666788888899999999999999998899888766653
No 383
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=30.88 E-value=54 Score=26.71 Aligned_cols=37 Identities=24% Similarity=0.315 Sum_probs=29.6
Q ss_pred CEEEEEcCC---CccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFP---AQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~---~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.+|+|+|.- ..--.++...|++.|.++|.+|.|+.+|
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 378888853 2234678899999999999999999886
No 384
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=30.86 E-value=52 Score=28.68 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=25.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|+++++.++.| --.++|+.|+++|++|+++..
T Consensus 26 k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 67888866554 345889999999999998865
No 385
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=30.80 E-value=44 Score=29.50 Aligned_cols=33 Identities=12% Similarity=0.200 Sum_probs=27.0
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
++||.|+-.|..|. .+|+.|+++||+|++....
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcCC
Confidence 45899998887774 6789999999999988553
No 386
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=30.79 E-value=66 Score=27.86 Aligned_cols=34 Identities=12% Similarity=0.088 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 378888876654 3467899999999999888654
No 387
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=30.76 E-value=82 Score=24.02 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=61.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhC--CCEEEEEeCccchhHHhh-ccCccccCCCCeEEEEcCCCCCCCCcCcccH
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEH--GIKVTFVSTEHMHAKITA-SMPQKAEQSSLITMVSIPDGLESHEADRRDL 80 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 80 (460)
+++|.+.. .-.+=.-++.+|+.|.+. ||++ +.|......+++ . |++...+-...-
T Consensus 3 ~~~ialsv--~D~dK~~~v~~a~~~~~ll~Gf~l--~AT~gTa~~L~e~~---------Gl~v~~v~k~~~--------- 60 (134)
T 2xw6_A 3 MRALALIA--HDAKKEEMVAFCQRHREVLARFPL--VATGTTGRRIEEAT---------GLTVEKLLSGPL--------- 60 (134)
T ss_dssp SCEEEEEE--CGGGHHHHHHHHHHTHHHHTTSCE--EECHHHHHHHHHHH---------CCCCEECSCGGG---------
T ss_pred ccEEEEEE--ecccHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHhh---------CceEEEEEecCC---------
Confidence 44666654 233445688999999999 9955 467778888877 6 776655532110
Q ss_pred HHHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCC--cc--------hHHHHHHHhCCceEE
Q 012594 81 HKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLT--VG--------WALEVAEQMGIARAA 136 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~--~~--------~~~~~A~~lgiP~v~ 136 (460)
.-++.+-++++. .+.|+||.-.- .. .-...|-..+||++.
T Consensus 61 ---------eG~p~I~d~I~~-------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 61 ---------GGDQQMGARVAE-------GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp ---------THHHHHHHHHHT-------TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred ---------CCcchHHHHHHC-------CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 012345555555 89999996442 11 234578889999995
No 388
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=30.76 E-value=13 Score=35.53 Aligned_cols=35 Identities=11% Similarity=0.236 Sum_probs=28.2
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
..|||+++-.|-.| ..||+.|.+.||+|+++=.++
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 46899999877655 468999999999999986643
No 389
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=30.72 E-value=1e+02 Score=27.12 Aligned_cols=74 Identities=22% Similarity=0.122 Sum_probs=48.5
Q ss_pred EEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHHHHHHhhchHHHHHHHHHHhhcCCCCCccE
Q 012594 34 KVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVRQSMLTVMPGCLRNLIEKVNKSNDCEKISC 113 (460)
Q Consensus 34 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~ 113 (460)
+..+++++.+.-+.+.+ |++...+...-+..+ .....+.++++.+++ .+..+
T Consensus 184 ~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~e---------------ps~~~l~~l~~~ik~----~~v~~ 235 (294)
T 3hh8_A 184 KLIVTSEGCFKYFSKAY---------GVPSAYIWEINTEEE---------------GTPDQISSLIEKLKV----IKPSA 235 (294)
T ss_dssp CCEEEEESCCHHHHHHH---------TCCEEEEESSCCSCC---------------CCHHHHHHHHHHHHH----SCCSC
T ss_pred cEEEEECChHHHHHHHc---------CCceeeccccCCCCC---------------CCHHHHHHHHHHHHH----cCCCE
Confidence 55566677777777777 666655432111111 112335566666666 88999
Q ss_pred EEeCCCcc--hHHHHHHHhCCceE
Q 012594 114 VIADLTVG--WALEVAEQMGIARA 135 (460)
Q Consensus 114 vv~D~~~~--~~~~~A~~lgiP~v 135 (460)
|+++.... .+..+|+..|++.+
T Consensus 236 if~e~~~~~~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 236 LFVESSVDRRPMETVSKDSGIPIY 259 (294)
T ss_dssp EEEETTSCSHHHHHHHHHHCCCEE
T ss_pred EEEeCCCCcHHHHHHHHHhCCcEE
Confidence 99998665 56788999999998
No 390
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=30.70 E-value=70 Score=27.43 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=25.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 12 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 12 KVVVISGVGPA---LGTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp CEEEEESCCTT---HHHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 77888866554 3468899999999999988764
No 391
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=30.68 E-value=81 Score=28.06 Aligned_cols=37 Identities=19% Similarity=0.362 Sum_probs=24.8
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|..+++|+ ++ |+.|-+- .+|++.|.++||+|+++...
T Consensus 2 M~~~~~vl-VT-GatG~iG--~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 2 MSTKGTIL-VT-GGAGYIG--SHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp CCSSCEEE-EE-TTTSHHH--HHHHHHHHHTTCEEEEECCC
T ss_pred CCCCcEEE-Ee-cCCcHHH--HHHHHHHHHCCCcEEEEecC
Confidence 44444554 44 4444443 57899999999999998653
No 392
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=30.55 E-value=1.5e+02 Score=27.27 Aligned_cols=37 Identities=14% Similarity=0.065 Sum_probs=28.1
Q ss_pred EEEEEcCCCcc-ChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQG-HAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~g-H~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+++++++|+.+ ....+..+.+.|.+.|.+|.+.+...
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~ 259 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWA 259 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTT
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 56788888877 55557778888888899988877643
No 393
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=30.51 E-value=30 Score=31.70 Aligned_cols=42 Identities=21% Similarity=0.244 Sum_probs=31.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc-chhHHhhc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH-MHAKITAS 50 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~-~~~~~~~~ 50 (460)
.+||.|+-.|..| ..+|..|+++||+|++..... ..+.+.+.
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~~~~~~~i~~~ 71 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYESDHVDEMQAE 71 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSCHHHHHHHHHH
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 4689999888777 468899999999999998753 33444444
No 394
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=30.50 E-value=1.1e+02 Score=26.11 Aligned_cols=37 Identities=8% Similarity=0.105 Sum_probs=26.2
Q ss_pred EEEEEcCC----CccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFP----AQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~----~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
||+|+..+ ..--..=+......|.+.|++|++++...
T Consensus 25 kV~ill~~~~~~dG~e~~E~~~p~~vL~~aG~~V~~~S~~~ 65 (242)
T 3l3b_A 25 NSAVILAGCGHMDGSEIREAVLVMLELDRHNVNFKCFAPNK 65 (242)
T ss_dssp EEEEECCCSSTTTSCCHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEEEecCCCCCCeeHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 89888752 22233445566788889999999999754
No 395
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=30.36 E-value=56 Score=28.37 Aligned_cols=32 Identities=25% Similarity=0.249 Sum_probs=26.0
Q ss_pred CCccEEEeCCCcc------hHHHHHHHhCCceEEEccc
Q 012594 109 EKISCVIADLTVG------WALEVAEQMGIARAAVIPY 140 (460)
Q Consensus 109 ~~~D~vv~D~~~~------~~~~~A~~lgiP~v~~~~~ 140 (460)
.+||+||+..... .+..+|..||+|.+.....
T Consensus 111 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 111 EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 6799999887553 6889999999999976543
No 396
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=30.29 E-value=49 Score=29.45 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=28.5
Q ss_pred CCCCCEEEEEcCCCccChHH-HHHHHHHHHhCCCEEEEEeC
Q 012594 1 MDREPHVLVIPFPAQGHAGP-LMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p-~~~La~~L~~rGh~V~~~~~ 40 (460)
|..+.||+++.-+..++... ...+.+.|.++|++|.+..+
T Consensus 1 m~~m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 1 MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp ----CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 54445899999888777544 66888999999999987644
No 397
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=30.28 E-value=59 Score=28.18 Aligned_cols=34 Identities=18% Similarity=0.140 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.|+++++.++.| --.++|+.|+++|++|+++...
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeCC
Confidence 378888866654 3468899999999999988764
No 398
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=30.24 E-value=66 Score=28.19 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHhCCceEEE
Q 012594 93 GCLRNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQMGIARAAV 137 (460)
Q Consensus 93 ~~~~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~ 137 (460)
..+.++++.+++ .+..+|+++.... .+-.+|+..|++.+.+
T Consensus 210 ~~l~~l~~~ik~----~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l 252 (284)
T 2prs_A 210 QRLHEIRTQLVE----QKATCVFAEPQFRPAVVESVARGTSVRMGTL 252 (284)
T ss_dssp HHHHHHHHHHHH----TTCCEEEECTTSCSHHHHHHTTTSCCEEEEC
T ss_pred HHHHHHHHHHHH----cCCCEEEEeCCCChHHHHHHHHHcCCeEEEe
Confidence 345666666666 8899999998665 5677899999998764
No 399
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=30.22 E-value=31 Score=30.63 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
++||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 7 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 4689999777666 46889999999999998553
No 400
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=30.16 E-value=80 Score=26.69 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=25.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|+++++.++.| --.++++.|+++|++|.++..
T Consensus 8 k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 8 KVALVTGASRG---IGRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeC
Confidence 67888876654 346889999999999988644
No 401
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=30.11 E-value=62 Score=27.23 Aligned_cols=34 Identities=9% Similarity=0.104 Sum_probs=24.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++++.++. - --.++++.|+++|++|+++....
T Consensus 3 k~vlVTGas~-g--iG~~~a~~l~~~G~~V~~~~r~~ 36 (239)
T 2ekp_A 3 RKALVTGGSR-G--IGRAIAEALVARGYRVAIASRNP 36 (239)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCc-H--HHHHHHHHHHHCCCEEEEEeCCH
Confidence 5666665443 2 23578999999999999987654
No 402
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=30.10 E-value=64 Score=27.64 Aligned_cols=33 Identities=12% Similarity=0.226 Sum_probs=24.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++++.|+++|++|+++...
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 8 KVCLVTGAGGN---IGLATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67777755442 2457899999999999988764
No 403
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=30.10 E-value=55 Score=28.91 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=31.5
Q ss_pred CCEE-EEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHV-LVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~I-l~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+++| +|..-|+-|-..-...||..|+++|++|.++=.+.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3444 45555788999999999999999999999996654
No 404
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=30.07 E-value=60 Score=27.35 Aligned_cols=34 Identities=3% Similarity=-0.140 Sum_probs=24.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++++.|+++|++|+++....
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~~ 41 (241)
T 1dhr_A 8 RRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVVE 41 (241)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESSC
T ss_pred CEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCCh
Confidence 56667755442 34678999999999999887543
No 405
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=30.02 E-value=2.2e+02 Score=25.36 Aligned_cols=107 Identities=12% Similarity=0.105 Sum_probs=56.9
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHHhC-CCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccce
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLESL-QQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVACF 352 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~~ 352 (460)
+.+|..|.+.. .++.++... +.+++.+...... ....+.++. + ..-+-...+++..++++++
T Consensus 7 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~------~~~~~a~~~--g--~~~~~~~~~~l~~~~~D~V 69 (344)
T 3euw_A 7 IALFGAGRIGH-------VHAANIAANPDLELVVIADPFIE------GAQRLAEAN--G--AEAVASPDEVFARDDIDGI 69 (344)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSHH------HHHHHHHTT--T--CEEESSHHHHTTCSCCCEE
T ss_pred EEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCCHH------HHHHHHHHc--C--CceeCCHHHHhcCCCCCEE
Confidence 67788886542 345555544 4455555543300 001111111 1 2234566778876677777
Q ss_pred eeccChh----hhhHhhhcCCceeec-cccc--hhhh-hHHHHHhhhcceeEee
Q 012594 353 LSHCGWN----STLEGLSMGVPFLCW-PYFA--DQYQ-NRNYIFDAWKIGLRFF 398 (460)
Q Consensus 353 I~hgG~~----sv~eal~~GvP~i~~-P~~~--dQ~~-~a~~v~~~lg~g~~~~ 398 (460)
+----.. .+.+|+.+|+++++- |+.. ++.. ..+.+++ .|+-+.+.
T Consensus 70 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~-~g~~~~v~ 122 (344)
T 3euw_A 70 VIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGD-GASKVMLG 122 (344)
T ss_dssp EECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGG-GGGGEEEC
T ss_pred EEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHh-cCCeEEec
Confidence 7544433 467889999998874 6543 3333 3334444 47666554
No 406
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=29.93 E-value=1.2e+02 Score=27.39 Aligned_cols=60 Identities=12% Similarity=0.030 Sum_probs=36.7
Q ss_pred ccCchhhcCCCcccceeeccChh----hhhHhhhcCCceeec-cccc--hhhhh-HHHHHhhhcceeEe
Q 012594 337 WAPQEKVLGHPSVACFLSHCGWN----STLEGLSMGVPFLCW-PYFA--DQYQN-RNYIFDAWKIGLRF 397 (460)
Q Consensus 337 ~~p~~~ll~~~~~~~~I~hgG~~----sv~eal~~GvP~i~~-P~~~--dQ~~~-a~~v~~~lg~g~~~ 397 (460)
+-...++|..+++++|+-.--.. -+.+|+.+|+++++= |+.. ++..- .+.+++ .|+-+.+
T Consensus 57 ~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~-~g~~~~v 124 (359)
T 3m2t_A 57 LDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARR-SDVVSGV 124 (359)
T ss_dssp ESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHH-HTCCEEE
T ss_pred cCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHH-cCCEEEE
Confidence 34567788877777777655443 367789999998774 6543 33332 333344 3665555
No 407
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.90 E-value=98 Score=22.78 Aligned_cols=40 Identities=8% Similarity=-0.047 Sum_probs=28.1
Q ss_pred EEE-EEcCCCccCh--HHHHHHHHHHHhCCCEEEEEeCccchh
Q 012594 6 HVL-VIPFPAQGHA--GPLMKLSTKIAEHGIKVTFVSTEHMHA 45 (460)
Q Consensus 6 ~Il-~~~~~~~gH~--~p~~~La~~L~~rGh~V~~~~~~~~~~ 45 (460)
|++ ++..+-+|+. .-.+.+|..+...||+|.++-...-.-
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~ 45 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVF 45 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHH
Confidence 454 5555666766 446778888888999999887655433
No 408
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=29.83 E-value=32 Score=30.45 Aligned_cols=32 Identities=28% Similarity=0.274 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.||.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 4899998887776 5788899999999987654
No 409
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=29.74 E-value=78 Score=28.07 Aligned_cols=38 Identities=11% Similarity=-0.009 Sum_probs=28.8
Q ss_pred CEEEEEcCCCccC----hHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGH----AGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH----~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+||+++..|-.+- +.-...++++|.++||+|..+.+..
T Consensus 14 ~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 14 GKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5898888664443 2356789999999999999998543
No 410
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=29.71 E-value=46 Score=29.92 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=21.8
Q ss_pred CCccEEEeCCCcchHHHHHHHhCCceEEEccc
Q 012594 109 EKISCVIADLTVGWALEVAEQMGIARAAVIPY 140 (460)
Q Consensus 109 ~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~ 140 (460)
.+||+||+.....-...--+..|||++.+...
T Consensus 115 l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 115 ATPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 78999998754222233345679999988643
No 411
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=29.65 E-value=98 Score=26.47 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=28.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
-|+++++.++.| =-.++|+.|++.|.+|.+.....
T Consensus 9 GKvalVTGas~G---IG~aiA~~la~~Ga~Vvi~~r~~ 43 (247)
T 4hp8_A 9 GRKALVTGANTG---LGQAIAVGLAAAGAEVVCAARRA 43 (247)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEeCcCCH---HHHHHHHHHHHcCCEEEEEeCCc
Confidence 489999987765 34688999999999999987654
No 412
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=29.64 E-value=97 Score=23.39 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=22.9
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 142 (460)
.+||+||.|.... .+..+++.+ ++|+|.++....
T Consensus 50 ~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (153)
T 3cz5_A 50 TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQG 90 (153)
T ss_dssp TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 7799999997554 344443332 689998876654
No 413
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=29.63 E-value=1.1e+02 Score=25.97 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=28.4
Q ss_pred CCEEEEEcCCCc-----------cChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQ-----------GHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~-----------gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
++||+|+..... -...=+....+.|.+.|++|++++...
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 348988876422 244567777888999999999999754
No 414
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=29.49 E-value=34 Score=30.75 Aligned_cols=36 Identities=17% Similarity=0.370 Sum_probs=25.9
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCC-EEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGI-KVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh-~V~~~~~~ 41 (460)
|++++||.++-. |++--. +|..|+.+|+ +|+++-.+
T Consensus 1 m~~~~kI~VIGa---G~vG~~--ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 1 MAPKAKIVLVGS---GMIGGV--MATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp -CCCCEEEEECC---SHHHHH--HHHHHHHTTCCEEEEECSS
T ss_pred CCCCCEEEEECC---CHHHHH--HHHHHHhCCCCeEEEEeCC
Confidence 777789999864 544433 8999999999 97776544
No 415
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=29.47 E-value=69 Score=27.82 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=26.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 377888866553 3467899999999999988754
No 416
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=29.46 E-value=89 Score=26.41 Aligned_cols=35 Identities=3% Similarity=-0.226 Sum_probs=24.7
Q ss_pred CCccEEEeCCCcc--hHHHHHHH----hCCceEEEcccchH
Q 012594 109 EKISCVIADLTVG--WALEVAEQ----MGIARAAVIPYAPA 143 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~----lgiP~v~~~~~~~~ 143 (460)
++||++|+-.-.. .+...|+. .|||+|+++..+..
T Consensus 63 ~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~ 103 (283)
T 1qv9_A 63 FEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPGL 103 (283)
T ss_dssp HCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGGG
T ss_pred cCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcch
Confidence 8999888654333 55666654 49999999877754
No 417
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=29.46 E-value=63 Score=28.29 Aligned_cols=33 Identities=12% Similarity=0.077 Sum_probs=25.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe-Cc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVS-TE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~-~~ 41 (460)
|+++++.++.| --.++++.|+++|++|+++. ..
T Consensus 10 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~r~ 43 (291)
T 1e7w_A 10 PVALVTGAAKR---LGRSIAEGLHAEGYAVCLHYHRS 43 (291)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCeEEEEcCCC
Confidence 67888866543 34689999999999999987 43
No 418
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=29.45 E-value=43 Score=28.63 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| + -.++++.|+++|++|+++...
T Consensus 2 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 34 (254)
T 1zmt_A 2 STAIVTNVKHF-G--GMGSALRLSEAGHTVACHDES 34 (254)
T ss_dssp CEEEESSTTST-T--HHHHHHHHHHTTCEEEECCGG
T ss_pred eEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 46677755433 3 357899999999999887543
No 419
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=29.40 E-value=15 Score=18.39 Aligned_cols=17 Identities=35% Similarity=0.583 Sum_probs=13.9
Q ss_pred ChhhhhHhhhcCCceee
Q 012594 357 GWNSTLEGLSMGVPFLC 373 (460)
Q Consensus 357 G~~sv~eal~~GvP~i~ 373 (460)
|.|+++-.|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888999988765
No 420
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=29.28 E-value=43 Score=27.56 Aligned_cols=32 Identities=19% Similarity=0.204 Sum_probs=23.3
Q ss_pred CEEEEEc-CCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIP-FPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~-~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+||+|+- .|..| ..+++.|.++||+|+++...
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3687775 44444 46788999999999988654
No 421
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=29.28 E-value=1.2e+02 Score=25.20 Aligned_cols=37 Identities=16% Similarity=0.084 Sum_probs=27.7
Q ss_pred EEEEEcCC---------CccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFP---------AQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~---------~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
||+|+... ..-...-+....+.|.+.|++|++++...
T Consensus 7 kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 7 RVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp EEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 88887762 33344567777888989999999999754
No 422
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=29.24 E-value=36 Score=29.28 Aligned_cols=41 Identities=12% Similarity=0.114 Sum_probs=33.2
Q ss_pred CCEEEEEcCC---CccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 4 EPHVLVIPFP---AQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 4 ~~~Il~~~~~---~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
++|-+|++.| +.|-=.-...|+..|..||++|+.+=.+++.
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYl 65 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBC
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCce
Confidence 4688899887 5566677889999999999999998666543
No 423
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=29.21 E-value=66 Score=27.88 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=26.1
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 10 gk~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVTGGARG---QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEccc
Confidence 377888866553 3468999999999999988654
No 424
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=29.19 E-value=75 Score=26.08 Aligned_cols=38 Identities=8% Similarity=0.189 Sum_probs=26.1
Q ss_pred CCCEEEEEcCCCccChHHHH-HHHHHHHhCCCEEEEEeC
Q 012594 3 REPHVLVIPFPAQGHAGPLM-KLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~-~La~~L~~rGh~V~~~~~ 40 (460)
+++||+++-....|+..-+. .+++.|.+.|++|.++--
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 45688877765577665544 456677778999888754
No 425
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=29.17 E-value=80 Score=25.72 Aligned_cols=36 Identities=8% Similarity=0.349 Sum_probs=26.4
Q ss_pred EEE-EEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVL-VIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il-~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
||+ |+..+...+-.....+++.|++.|++|.+++..
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 554 554445556777888999999999999988654
No 426
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=29.16 E-value=45 Score=29.68 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.+||.|+-.|..|. .+|..|++.||+|+++...
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 46899998776663 5788899999999887653
No 427
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=29.11 E-value=50 Score=32.53 Aligned_cols=40 Identities=25% Similarity=0.289 Sum_probs=34.2
Q ss_pred CCEEEEEcC-CCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 4 EPHVLVIPF-PAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 4 ~~~Il~~~~-~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
..+|+|++. |+-|-..-...||..|+++|++|.++..+..
T Consensus 7 ~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~~ 47 (589)
T 1ihu_A 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (589)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 346766665 7899999999999999999999999999864
No 428
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=29.08 E-value=2.6e+02 Score=25.34 Aligned_cols=89 Identities=11% Similarity=0.078 Sum_probs=54.3
Q ss_pred EEEEEcCCCcc----ChHHHHHHHHHHHhCCCEEEEEeCccchhHHhhccCccccCCCCeEEEEcCCCCCCCCcCcccHH
Q 012594 6 HVLVIPFPAQG----HAGPLMKLSTKIAEHGIKVTFVSTEHMHAKITASMPQKAEQSSLITMVSIPDGLESHEADRRDLH 81 (460)
Q Consensus 6 ~Il~~~~~~~g----H~~p~~~La~~L~~rGh~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 81 (460)
+++++++|+.+ ...-+..+.+.|.+.+.+|.+++.....+.+... ..++.+..+- +
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~-------~~~v~~~~~~-----------~-- 292 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTL-------PRNVRAVGWT-----------P-- 292 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSC-------CTTEEEESSC-----------C--
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhccC-------CCcEEEEccC-----------C--
Confidence 57778878773 3345778888998889999888876543333211 1244442111 0
Q ss_pred HHHHHHHhhchHHHHHHHHHHhhcCCCCCccEEEeCCCcchHHHHHHHhCCceEEE
Q 012594 82 KVRQSMLTVMPGCLRNLIEKVNKSNDCEKISCVIADLTVGWALEVAEQMGIARAAV 137 (460)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 137 (460)
..+++ ...|++|+.... .+..-|-.+|+|.|.+
T Consensus 293 -------------~~~ll---------~~ad~~v~~~G~-~t~~Eal~~G~P~v~~ 325 (398)
T 3oti_A 293 -------------LHTLL---------RTCTAVVHHGGG-GTVMTAIDAGIPQLLA 325 (398)
T ss_dssp -------------HHHHH---------TTCSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred -------------HHHHH---------hhCCEEEECCCH-HHHHHHHHhCCCEEEc
Confidence 11222 337999987533 3555677889999975
No 429
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=29.05 E-value=1e+02 Score=29.16 Aligned_cols=32 Identities=25% Similarity=0.293 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
+.||+|+-.|..| +++|+.|+++||+|+..=.
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 3589999887655 3469999999999999754
No 430
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=29.03 E-value=75 Score=22.78 Aligned_cols=48 Identities=8% Similarity=-0.031 Sum_probs=33.0
Q ss_pred hcCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcC
Q 012594 366 SMGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLND 420 (460)
Q Consensus 366 ~~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 420 (460)
...+|+|++ ..+.........+ .|+--.+. +.++.++|.+.|++++..
T Consensus 78 ~~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~----kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 78 LKNVPIVII--GNPDGFAQHRKLK-AHADEYVA----KPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTTSCEEEE--ECGGGHHHHHHST-TCCSEEEE----SSCCHHHHHHHHHHHHCC
T ss_pred ccCCCEEEE--ecCCchhHHHHHH-hCcchhee----CCCCHHHHHHHHHHHHcC
Confidence 357899999 3344444445555 47755554 568999999999998864
No 431
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=29.01 E-value=49 Score=28.96 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=25.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
+||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 478888776655 46789999999999987654
No 432
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=28.95 E-value=79 Score=26.80 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=26.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|+++++.++.| --.++|+.|+++|++|.+.....
T Consensus 9 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~~ 43 (248)
T 3op4_A 9 GKVALVTGASRG---IGKAIAELLAERGAKVIGTATSE 43 (248)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 378888866543 24678999999999999886643
No 433
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=28.83 E-value=1.5e+02 Score=27.72 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.|+++++.++.| +-...+++..|+++|++|.++...
T Consensus 60 gK~aLVTGassG-IG~A~aia~ala~~Ga~Vi~~~r~ 95 (418)
T 4eue_A 60 PKKVLIVGASSG-FGLATRISVAFGGPEAHTIGVSYE 95 (418)
T ss_dssp CSEEEEESCSSH-HHHHHHHHHHHSSSCCEEEEEECC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHHhCCCEEEEEecC
Confidence 477888865543 555555888898889999888654
No 434
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=28.83 E-value=76 Score=27.31 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=26.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.|.++++.++.| --.++|+.|+++|++|.++...
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367788866554 3468899999999999998763
No 435
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=28.83 E-value=32 Score=30.84 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=26.9
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCC----CEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHG----IKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rG----h~V~~~~~~~ 42 (460)
|.+++||.|+-.|..|. .+|..|.+.| |+|++.....
T Consensus 19 ~~~~mkI~iIG~G~mG~-----ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAF-----ALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp ---CCCEEEESCSHHHH-----HHHHHHHHTTSSCGGGEEEECSCT
T ss_pred ccCCCEEEEECCCHHHH-----HHHHHHHHCCCCCcceEEEECCCc
Confidence 44567899998876664 6688899999 9999886643
No 436
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=28.79 E-value=72 Score=27.00 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=25.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 9 ~k~vlITGas~g---iG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 9 NKVGIVTGSGGG---IGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcCC
Confidence 467777765432 3468899999999999988764
No 437
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=28.77 E-value=49 Score=28.19 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.+||.|+-.|..| ..+|+.|+++||+|++.....
T Consensus 19 ~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCCh
Confidence 3589998766655 467899999999999986543
No 438
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=28.76 E-value=36 Score=29.32 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=23.9
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
|||.|+-.|..|. .+|+.|++.||+|++...
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeCC
Confidence 3788887776664 578999999999998533
No 439
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=28.73 E-value=3.1e+02 Score=24.34 Aligned_cols=38 Identities=21% Similarity=0.385 Sum_probs=31.7
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccch
Q 012594 7 VLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHMH 44 (460)
Q Consensus 7 Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~~ 44 (460)
|+++..++.|-..=...||..|+..|.+|.++..+.+.
T Consensus 108 I~ivG~~G~GKTT~~~~LA~~l~~~g~kVllid~D~~r 145 (320)
T 1zu4_A 108 FMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFR 145 (320)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCSC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 45555678899999999999999999999999877643
No 440
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=28.68 E-value=43 Score=30.34 Aligned_cols=31 Identities=16% Similarity=0.103 Sum_probs=21.2
Q ss_pred CCccEEEeCCCcc-hHHHHHHHhCCceEEEcc
Q 012594 109 EKISCVIADLTVG-WALEVAEQMGIARAAVIP 139 (460)
Q Consensus 109 ~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~ 139 (460)
.+||+||+..... ....+.+.+|||++.+..
T Consensus 95 l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 95 LQPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp HCCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 5799999865322 223345778999998753
No 441
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=28.60 E-value=78 Score=26.76 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=24.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++++.|+++|++|+++...
T Consensus 6 k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 6 KAVLITGAAHG---IGRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56677755443 2457899999999999988764
No 442
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=28.58 E-value=45 Score=30.43 Aligned_cols=39 Identities=10% Similarity=0.150 Sum_probs=33.1
Q ss_pred CEEEEEcC-CCccChHHHHHHHHHHH--hCCCEEEEEeCccc
Q 012594 5 PHVLVIPF-PAQGHAGPLMKLSTKIA--EHGIKVTFVSTEHM 43 (460)
Q Consensus 5 ~~Il~~~~-~~~gH~~p~~~La~~L~--~rGh~V~~~~~~~~ 43 (460)
.+|+|++. |+-|-..-...||..|+ ++|++|.++..+..
T Consensus 18 ~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~ 59 (354)
T 2woj_A 18 HKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPA 59 (354)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC
Confidence 35665554 79999999999999999 99999999998864
No 443
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=28.46 E-value=56 Score=28.75 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=24.0
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
++|++. |+.|.+- ..|++.|.++||+|+.++...
T Consensus 8 ~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 41 (321)
T 3vps_A 8 HRILIT--GGAGFIG--GHLARALVASGEEVTVLDDLR 41 (321)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCCEEEECCCS
T ss_pred CeEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecCC
Confidence 455543 4555543 478899999999999987644
No 444
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=28.38 E-value=32 Score=25.93 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=23.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.+|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 36877764 4333 46789999999999988764
No 445
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=28.36 E-value=78 Score=27.32 Aligned_cols=34 Identities=15% Similarity=0.081 Sum_probs=27.3
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
-|+++++.++.| --.++|+.|+++|++|.+....
T Consensus 11 GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r~ 44 (261)
T 4h15_A 11 GKRALITAGTKG---AGAATVSLFLELGAQVLTTARA 44 (261)
T ss_dssp TCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEECC
Confidence 389999977765 3468899999999999887653
No 446
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=28.26 E-value=42 Score=28.33 Aligned_cols=40 Identities=13% Similarity=0.138 Sum_probs=32.0
Q ss_pred CCEEE-EEc-CCCccChHHHHHHHHHHHhC-CCEEEEEeCccc
Q 012594 4 EPHVL-VIP-FPAQGHAGPLMKLSTKIAEH-GIKVTFVSTEHM 43 (460)
Q Consensus 4 ~~~Il-~~~-~~~~gH~~p~~~La~~L~~r-Gh~V~~~~~~~~ 43 (460)
++||+ |.+ -|+-|-..-...||..|+++ |++|.++-.+..
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 34555 443 37889999999999999998 999999977654
No 447
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=28.21 E-value=65 Score=27.78 Aligned_cols=32 Identities=13% Similarity=0.022 Sum_probs=25.7
Q ss_pred CCccEEEeCCCcc------hHHHHHHHhCCceEEEccc
Q 012594 109 EKISCVIADLTVG------WALEVAEQMGIARAAVIPY 140 (460)
Q Consensus 109 ~~~D~vv~D~~~~------~~~~~A~~lgiP~v~~~~~ 140 (460)
.+||+|++..... .+..+|..||+|.+.....
T Consensus 115 ~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 115 EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 5699999877553 6889999999999976543
No 448
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=28.18 E-value=1.8e+02 Score=26.12 Aligned_cols=125 Identities=14% Similarity=0.053 Sum_probs=65.7
Q ss_pred EEEEEcCCCcCCCHHHHHHHHHHHHhC--CCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcCCCcccc
Q 012594 274 VIYVAFGSVAVLSQEQLEELALGLESL--QQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLGHPSVAC 351 (460)
Q Consensus 274 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~~~~~~~ 351 (460)
+.+|..|.+.. .++.++.+. +.+++.+..... ...+.+.++. ++ ..+-...+++..+++++
T Consensus 16 vgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~------~~~~~~~~~~--~~--~~~~~~~~ll~~~~~D~ 78 (354)
T 3q2i_A 16 FALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDP------AALKAAVERT--GA--RGHASLTDMLAQTDADI 78 (354)
T ss_dssp EEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSH------HHHHHHHHHH--CC--EEESCHHHHHHHCCCSE
T ss_pred EEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCH------HHHHHHHHHc--CC--ceeCCHHHHhcCCCCCE
Confidence 88898887652 345566555 445555554330 0011111111 12 34556677887666766
Q ss_pred eeeccCh----hhhhHhhhcCCceeec-cccc--hhhh-hHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhcC
Q 012594 352 FLSHCGW----NSTLEGLSMGVPFLCW-PYFA--DQYQ-NRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLND 420 (460)
Q Consensus 352 ~I~hgG~----~sv~eal~~GvP~i~~-P~~~--dQ~~-~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~~ 420 (460)
++----. ..+.+|+.+|+++++- |+.. ++.. ..+.+++ .|+-+.+.. ...+.+ ..+.+++++.+
T Consensus 79 V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~-~g~~~~v~~--~~r~~p--~~~~~k~~i~~ 150 (354)
T 3q2i_A 79 VILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADK-AKKHLFVVK--QNRRNA--TLQLLKRAMQE 150 (354)
T ss_dssp EEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHH-HTCCEEECC--GGGGSH--HHHHHHHHHHT
T ss_pred EEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHH-hCCeEEEEE--cccCCH--HHHHHHHHHhc
Confidence 7653332 3467889999999874 6543 3332 3334444 476665543 233444 23455555543
No 449
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=28.16 E-value=86 Score=26.89 Aligned_cols=35 Identities=11% Similarity=0.140 Sum_probs=26.2
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|+++++.++.| --.++|++|+++|++|.++....
T Consensus 10 ~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r~~ 44 (267)
T 3t4x_A 10 GKTALVTGSTAG---IGKAIATSLVAEGANVLINGRRE 44 (267)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 367888866543 23578999999999999887643
No 450
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=28.12 E-value=59 Score=27.68 Aligned_cols=30 Identities=13% Similarity=0.092 Sum_probs=21.3
Q ss_pred CCccEEEeCCCcc--hHHHHHHHhCCceEEEc
Q 012594 109 EKISCVIADLTVG--WALEVAEQMGIARAAVI 138 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~ 138 (460)
.+||+||+..... -....-+..|||++.+.
T Consensus 58 l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 58 MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 7899999886542 22333467799999875
No 451
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=28.12 E-value=84 Score=23.24 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=22.7
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh-----CCceEEEcccch
Q 012594 109 EKISCVIADLTVG--WALEVAEQM-----GIARAAVIPYAP 142 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 142 (460)
.+||+||.|...+ .+..+++.+ .+|.|.++....
T Consensus 43 ~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 83 (139)
T 2jk1_A 43 EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYTD 83 (139)
T ss_dssp SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCTT
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 7799999997654 444444433 578888765543
No 452
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=28.12 E-value=78 Score=27.49 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=26.3
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
..|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 4 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 4 TGEVALITGGASG---LGRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeCC
Confidence 3478888866543 3457899999999999988654
No 453
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=28.12 E-value=79 Score=26.63 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=24.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++++.++. - --.++++.|+++|++|+++....
T Consensus 7 k~vlVtGasg-g--iG~~~a~~l~~~G~~V~~~~r~~ 40 (251)
T 1zk4_A 7 KVAIITGGTL-G--IGLAIATKFVEEGAKVMITGRHS 40 (251)
T ss_dssp CEEEETTTTS-H--HHHHHHHHHHHTTCEEEEEESCH
T ss_pred cEEEEeCCCC-h--HHHHHHHHHHHCCCEEEEEeCCH
Confidence 5677775543 2 34578999999999999887643
No 454
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=28.09 E-value=75 Score=26.90 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=25.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| + -.++++.|+++|++|+++....
T Consensus 8 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 8 KLAVITGGANG-I--GRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEcCCc
Confidence 67777755442 3 3578999999999999987643
No 455
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=28.04 E-value=70 Score=28.24 Aligned_cols=33 Identities=12% Similarity=0.209 Sum_probs=23.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+|++. |+.|.+- ..|+++|.++||+|+.++...
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 55444 4555553 468899999999999998764
No 456
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=28.04 E-value=1e+02 Score=24.83 Aligned_cols=85 Identities=13% Similarity=0.034 Sum_probs=56.3
Q ss_pred cChHHHHHHHHHHHhC--CCEEEEEeCccchhHHhh-ccCccccCCCCeEEEEcCCCCCCCCcCcccHHHHHHHHHhhch
Q 012594 16 GHAGPLMKLSTKIAEH--GIKVTFVSTEHMHAKITA-SMPQKAEQSSLITMVSIPDGLESHEADRRDLHKVRQSMLTVMP 92 (460)
Q Consensus 16 gH~~p~~~La~~L~~r--Gh~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (460)
.+=.-++.+|+.|.+. ||++ +.|......+++ . |+....+-.... . -+
T Consensus 37 ~dK~~lv~~ak~~~~lL~Gf~L--~AT~gTa~~L~e~~---------Gl~v~~v~k~~e-----G-------------G~ 87 (178)
T 1vmd_A 37 RRKRDLLEWVSFNLGTLSKHEL--YATGTTGALLQEKL---------GLKVHRLKSGPL-----G-------------GD 87 (178)
T ss_dssp GGHHHHHHHHHHSHHHHTTSEE--EECHHHHHHHHHHH---------CCCCEECSCGGG-----T-------------HH
T ss_pred hhHHHHHHHHHHHHHHhcCCEE--EEchHHHHHHHHHh---------CceeEEEeecCC-----C-------------CC
Confidence 3445688999999999 9965 467778888877 6 777655542110 0 12
Q ss_pred HHHHHHHHHHhhcCCCCCccEEEeCCC--cc--------hHHHHHHHhCCceEE
Q 012594 93 GCLRNLIEKVNKSNDCEKISCVIADLT--VG--------WALEVAEQMGIARAA 136 (460)
Q Consensus 93 ~~~~~~l~~l~~~~~~~~~D~vv~D~~--~~--------~~~~~A~~lgiP~v~ 136 (460)
+++-++++. .+.|+||.-.- .. .-..+|-..+||++.
T Consensus 88 pqI~d~I~~-------geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 88 QQIGAMIAE-------GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp HHHHHHHHT-------TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred chHHHHHHC-------CCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 345555555 89999996443 21 134578889999995
No 457
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=27.96 E-value=63 Score=28.85 Aligned_cols=73 Identities=16% Similarity=0.319 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCchhhcC-CCcccceeeccChhhhhH
Q 012594 285 LSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQEKVLG-HPSVACFLSHCGWNSTLE 363 (460)
Q Consensus 285 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ll~-~~~~~~~I~hgG~~sv~e 363 (460)
.+.+....+.+++.....+.||.+.++.. -.++.++++...+-. +|+. ||-+.-...+.-
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-----------------a~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~~ 124 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYG-----------------CGQLLPGLDWGRLQAASPRP--LIGFSDISVLLS 124 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSC-----------------GGGGTTTCCHHHHHHSCCCC--EEECGGGHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcC-----------------HHHHhhccchhhhhccCCCE--EEEEchhHHHHH
Confidence 35677788899998888888888776511 123455666665655 6666 887777777777
Q ss_pred hhh-cCCceeeccc
Q 012594 364 GLS-MGVPFLCWPY 376 (460)
Q Consensus 364 al~-~GvP~i~~P~ 376 (460)
+++ .|++.+--|.
T Consensus 125 al~~~G~~t~hGp~ 138 (311)
T 1zl0_A 125 AFHRHGLPAIHGPV 138 (311)
T ss_dssp HHHHTTCCEEECCC
T ss_pred HHHHcCCcEEECHh
Confidence 776 3666655554
No 458
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=27.93 E-value=63 Score=28.06 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=25.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 25 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 58 (279)
T 3sju_A 25 QTAFVTGVSSG---IGLAVARTLAARGIAVYGCARDA 58 (279)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 67778866543 34678999999999998877643
No 459
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=27.93 E-value=56 Score=28.55 Aligned_cols=31 Identities=13% Similarity=0.221 Sum_probs=24.2
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVS 39 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~ 39 (460)
++||.|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 35899998777774 46888999999998765
No 460
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=27.92 E-value=1e+02 Score=18.63 Aligned_cols=31 Identities=13% Similarity=0.244 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 012594 406 TRQEIQRQVKALLNDGGIKANALKMKQMARK 436 (460)
Q Consensus 406 ~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 436 (460)
|.+++.+...+--.||.++.+.++++.++..
T Consensus 2 skqEvK~E~Ke~EGdP~iK~~~R~~~~e~a~ 32 (48)
T 3c01_A 2 DKEEVKREMKEQEGNPEVKSKRREVHMEILS 32 (48)
T ss_pred CHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 5678888899999999999999999888875
No 461
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=27.91 E-value=70 Score=27.23 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=24.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++++.++.| + -.++++.|+++|++|+++....
T Consensus 8 k~vlITGasgg-i--G~~la~~l~~~G~~V~~~~r~~ 41 (264)
T 2pd6_A 8 ALALVTGAGSG-I--GRAVSVRLAGEGATVAACDLDR 41 (264)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCCh
Confidence 56777755432 3 3578999999999999987643
No 462
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=27.81 E-value=52 Score=26.15 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=29.8
Q ss_pred CEEEEEcCC---CccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 5 PHVLVIPFP---AQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 5 ~~Il~~~~~---~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.+|+|+|.= ..--..+...|++.|.++|.+|.|+.+|
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 478888853 2234678999999999999999999886
No 463
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.68 E-value=63 Score=29.09 Aligned_cols=41 Identities=22% Similarity=0.184 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|.++.|++++..|..|.-.-...+.+.|.++|++|.+..+.
T Consensus 26 m~~~~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~ 66 (332)
T 2bon_A 26 MAEFPASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTW 66 (332)
T ss_dssp ----CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECC
T ss_pred hhhcceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEec
Confidence 44345788887776665455567888899999999888654
No 464
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=27.67 E-value=93 Score=26.46 Aligned_cols=34 Identities=15% Similarity=0.298 Sum_probs=25.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++. -+ -.++++.|+++|++|+++....
T Consensus 15 k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r~~ 48 (260)
T 2zat_A 15 KVALVTASTD-GI--GLAIARRLAQDGAHVVVSSRKQ 48 (260)
T ss_dssp CEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeCCH
Confidence 6777775543 22 4578999999999999987643
No 465
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=27.60 E-value=61 Score=30.39 Aligned_cols=37 Identities=27% Similarity=0.455 Sum_probs=25.4
Q ss_pred CCCCCEEEEEcCCCccChHHHHHHHHHHHh---CCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAGPLMKLSTKIAE---HGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~p~~~La~~L~~---rGh~V~~~~~~~ 42 (460)
|..+.+|+++-.|..| +..|..|++ +|++||++....
T Consensus 1 M~~m~~vvIIGgG~aG-----l~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGG-----MPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp CTTSCEEEEECCSTTH-----HHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCCCCcEEEECCcHHH-----HHHHHHHhccCCCcCEEEEEeCCC
Confidence 6556689888755444 334555555 899999997654
No 466
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=27.51 E-value=75 Score=27.77 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=26.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 48 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 48 KNVLITGGDSG---IGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 67788866553 34688999999999999887654
No 467
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=27.51 E-value=33 Score=26.25 Aligned_cols=63 Identities=10% Similarity=0.114 Sum_probs=36.8
Q ss_pred cCCceeeccccchhhhhHHHHHhhhc-ceeEeecCCCCccCHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 012594 367 MGVPFLCWPYFADQYQNRNYIFDAWK-IGLRFFPDENGIITRQEIQRQVKALLNDGGIKANALKMKQMAR 435 (460)
Q Consensus 367 ~GvP~i~~P~~~dQ~~~a~~v~~~lg-~g~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~ 435 (460)
..+|+|++--..+.......+ + .| +--.+. +.++.+.|.++|++++....++++.+++.+.++
T Consensus 78 ~~~~ii~ls~~~~~~~~~~~~-~-~g~~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 141 (154)
T 2rjn_A 78 PDIERVVISGYADAQATIDAV-N-RGKISRFLL----KPWEDEDVFKVVEKGLQLAFLREENLRLQEETE 141 (154)
T ss_dssp TTSEEEEEECGGGHHHHHHHH-H-TTCCSEEEE----SSCCHHHHHHHHHHHHHHHHHHHHTTSCCC---
T ss_pred CCCcEEEEecCCCHHHHHHHH-h-ccchheeee----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888876555433333333 3 35 534443 568999999999999975555444444333333
No 468
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=27.44 E-value=50 Score=28.23 Aligned_cols=31 Identities=13% Similarity=-0.098 Sum_probs=20.9
Q ss_pred CCccEEEeCCCcc-hHHHHHHHhCCceEEEcc
Q 012594 109 EKISCVIADLTVG-WALEVAEQMGIARAAVIP 139 (460)
Q Consensus 109 ~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~ 139 (460)
.+||+||+..... .....-+.+|||++.+..
T Consensus 59 l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 59 LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred cCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 7899999864322 223344677999998754
No 469
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=27.42 E-value=83 Score=27.07 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=25.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 5 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 5 KVILITGASGG---IGEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCccH---HHHHHHHHHHHCCCEEEEEECC
Confidence 67778765542 2368899999999999988754
No 470
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=27.33 E-value=36 Score=30.80 Aligned_cols=41 Identities=7% Similarity=0.167 Sum_probs=28.1
Q ss_pred CCCCCEEEEEcCCCccChH----HHHHHHHHHHhCCCEEEEEeCcc
Q 012594 1 MDREPHVLVIPFPAQGHAG----PLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 1 m~~~~~Il~~~~~~~gH~~----p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|. ++||+++..|..+-.. ....++++|.+.||+|..+...+
T Consensus 1 m~-~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (343)
T 1e4e_A 1 MN-RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITK 45 (343)
T ss_dssp -C-CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred CC-CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEcC
Confidence 54 5688888755443333 35678899999999999986543
No 471
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=27.26 E-value=46 Score=31.56 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=26.5
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+||.|+-.|..| ..+|..|+++||+|+++....
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECCH
Confidence 589999776555 578999999999999886643
No 472
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=27.21 E-value=89 Score=27.35 Aligned_cols=33 Identities=12% Similarity=0.003 Sum_probs=25.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++|+.|+++|++|.+....
T Consensus 50 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 50 RKALVTGGDSG---IGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEECCG
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67888866543 3468899999999999987664
No 473
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=27.21 E-value=32 Score=30.60 Aligned_cols=32 Identities=25% Similarity=0.312 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
.+||.|+-.|..|. .+|+.|+++||+|++...
T Consensus 9 ~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp SCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 46899997776663 688999999999998754
No 474
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=27.20 E-value=84 Score=26.44 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=23.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|.++++.++ |-+ -.++++.|+++|++|+++...
T Consensus 3 k~vlItGas-ggi--G~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 3 RVAIVTGAS-SGN--GLAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEeCC
Confidence 566666544 322 457899999999999998764
No 475
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=27.18 E-value=97 Score=26.87 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=26.1
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQ-GHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~-gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++. |-+ -.++++.|+++|++|+++....
T Consensus 22 k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r~~ 57 (285)
T 2p91_A 22 KRALITGVANERSI--AYGIAKSFHREGAQLAFTYATP 57 (285)
T ss_dssp CEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEESSG
T ss_pred CEEEEECCCCCCcH--HHHHHHHHHHcCCEEEEEeCCH
Confidence 6777776652 444 3578999999999999987654
No 476
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=27.08 E-value=75 Score=27.39 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
..|+++++.++.| --.++|+.|+++|++|.+...
T Consensus 26 ~~k~~lVTGas~G---IG~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 26 TNKVAIVTGASRG---IGAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp -CCEEEEESCSSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEcC
Confidence 3477888866543 346889999999999998743
No 477
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=27.07 E-value=78 Score=27.01 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=24.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++. -+ -.++++.|+++|++|.++...
T Consensus 9 k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 9 KSALITGSAR-GI--GRAFAEAYVREGATVAIADID 41 (259)
T ss_dssp CEEEEETCSS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 6777775543 22 357899999999999888654
No 478
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=27.04 E-value=91 Score=27.02 Aligned_cols=33 Identities=15% Similarity=0.326 Sum_probs=25.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| + -.++|+.|+++|++|.++...
T Consensus 30 k~vlVTGas~g-I--G~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 30 KVAIVTGAGAG-I--GLAVARRLADEGCHVLCADID 62 (277)
T ss_dssp CEEEETTTTST-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 67888865543 3 357899999999999988764
No 479
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=26.97 E-value=78 Score=26.87 Aligned_cols=33 Identities=12% Similarity=0.210 Sum_probs=25.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 13 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 13 RIILVTGASDG---IGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67888866542 2357899999999999988754
No 480
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=26.97 E-value=52 Score=27.12 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=23.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
||++. |+.|.+- ..|+++|.++||+|+.++...
T Consensus 2 kilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 54443 4555443 578999999999999998754
No 481
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=26.86 E-value=82 Score=26.47 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=21.9
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 7 VLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 7 Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
.++++ |+.|-+ -.++++.|+++||+|+++...
T Consensus 3 ~vlVt-Gasg~i--G~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 3 VIAIT-GSASGI--GAALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp EEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEe-CCCcHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 44455 334433 356789999999999988653
No 482
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=26.78 E-value=37 Score=30.28 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=25.7
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
+..+|+++-.|..| +..|..|+++|++|+++-...
T Consensus 4 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTG-----LFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESSS
T ss_pred CcCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCCC
Confidence 34578888765433 567888889999999997643
No 483
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.77 E-value=76 Score=27.07 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=25.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++|+.|+++|++|.++...
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67788866543 3468899999999999988764
No 484
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=26.75 E-value=80 Score=26.80 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=24.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
|+++++.++.| --.++++.|+++|++|+++...
T Consensus 7 k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r~ 39 (253)
T 1hxh_A 7 KVALVTGGASG---VGLEVVKLLLGEGAKVAFSDIN 39 (253)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56777755443 3457899999999999887654
No 485
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=26.68 E-value=3.5e+02 Score=24.37 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=22.6
Q ss_pred CCCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCc
Q 012594 3 REPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTE 41 (460)
Q Consensus 3 ~~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~ 41 (460)
++|||+++ |+ |.+-. .+++.|+ +.|+|+++...
T Consensus 15 ~~mkilvl--Ga-G~vG~--~~~~~L~-~~~~v~~~~~~ 47 (365)
T 3abi_A 15 RHMKVLIL--GA-GNIGR--AIAWDLK-DEFDVYIGDVN 47 (365)
T ss_dssp -CCEEEEE--CC-SHHHH--HHHHHHT-TTSEEEEEESC
T ss_pred CccEEEEE--CC-CHHHH--HHHHHHh-cCCCeEEEEcC
Confidence 46899998 44 66654 4577775 56999987653
No 486
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=26.64 E-value=70 Score=30.71 Aligned_cols=31 Identities=13% Similarity=0.269 Sum_probs=25.8
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEE
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFV 38 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~ 38 (460)
..||.|+-.++.| +-.+|+.|+++|++|+..
T Consensus 22 ~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~ 52 (494)
T 4hv4_A 22 VRHIHFVGIGGAG----MGGIAEVLANEGYQISGS 52 (494)
T ss_dssp CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEE
Confidence 3589999988776 445899999999999986
No 487
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=26.63 E-value=75 Score=27.69 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=26.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
.|+++++.++.| --.++|+.|+++|++|.++....
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~~ 62 (283)
T 3v8b_A 28 SPVALITGAGSG---IGRATALALAADGVTVGALGRTR 62 (283)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCCH
Confidence 367888866553 34688999999999999887643
No 488
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=26.60 E-value=1.3e+02 Score=25.07 Aligned_cols=100 Identities=14% Similarity=0.048 Sum_probs=0.0
Q ss_pred chhhhhccCCCCcEEEEEcCCCcCCCHHHHHHHHHHHHhCCCCEEEEEcCCCCccccCCCchhHHhhhCCCcEEeeccCc
Q 012594 261 TCLGWLDKQAVGSVIYVAFGSVAVLSQEQLEELALGLESLQQPFLWVVRPDFMNKSHAKLPDGFVERVSDRGKLVEWAPQ 340 (460)
Q Consensus 261 ~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 340 (460)
++-++|.... ..+|+-|. .........++....+.+++=++... ..+.......-....+..+.+.
T Consensus 36 ~lg~~LA~~G---~~vVsGGg----~~GiM~aa~~gAl~~GG~tiGVlP~~-------~~~~e~~~~~~~~~~~~~~f~~ 101 (215)
T 2a33_A 36 DLGNELVSRN---IDLVYGGG----SIGLMGLVSQAVHDGGRHVIGIIPKT-------LMPRELTGETVGEVRAVADMHQ 101 (215)
T ss_dssp HHHHHHHHTT---CEEEECCC----SSHHHHHHHHHHHHTTCCEEEEEESS-------CC--------CCEEEEESSHHH
T ss_pred HHHHHHHHCC---CEEEECCC----hhhHhHHHHHHHHHcCCcEEEEcchH-------hcchhhccCCCCceeecCCHHH
Q ss_pred hh-hcCCCcccceeeccChhhhhHhhhc---------CCceeec
Q 012594 341 EK-VLGHPSVACFLSHCGWNSTLEGLSM---------GVPFLCW 374 (460)
Q Consensus 341 ~~-ll~~~~~~~~I~hgG~~sv~eal~~---------GvP~i~~ 374 (460)
.. ++..-+-..++--||.||+-|.... ++|++.+
T Consensus 102 Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll 145 (215)
T 2a33_A 102 RKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLL 145 (215)
T ss_dssp HHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred HHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEe
No 489
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=26.60 E-value=87 Score=27.13 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=25.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|+++++.++.| --.++++.|+++|++|+++....
T Consensus 30 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~~ 63 (283)
T 1g0o_A 30 KVALVTGAGRG---IGREMAMELGRRGCKVIVNYANS 63 (283)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCCc
Confidence 67777755543 34688999999999999887643
No 490
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=26.34 E-value=1.1e+02 Score=26.02 Aligned_cols=35 Identities=6% Similarity=0.075 Sum_probs=25.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCccc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEHM 43 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~~ 43 (460)
|+++++.++ |-+ -.++++.|+++|++|+++.....
T Consensus 5 k~vlVTGas-~gi--G~~ia~~l~~~G~~V~~~~r~~~ 39 (255)
T 2q2v_A 5 KTALVTGST-SGI--GLGIAQVLARAGANIVLNGFGDP 39 (255)
T ss_dssp CEEEESSCS-SHH--HHHHHHHHHHTTCEEEEECSSCC
T ss_pred CEEEEeCCC-cHH--HHHHHHHHHHCCCEEEEEeCCch
Confidence 567777554 323 45789999999999998866543
No 491
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=26.32 E-value=73 Score=28.40 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEe
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVS 39 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~ 39 (460)
|+++++.++.| --.++|+.|+++|++|++..
T Consensus 10 k~~lVTGas~G---IG~~~a~~La~~Ga~Vv~~~ 40 (319)
T 1gz6_A 10 RVVLVTGAGGG---LGRAYALAFAERGALVVVND 40 (319)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEc
Confidence 67888865543 34578999999999999863
No 492
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=26.31 E-value=1.8e+02 Score=27.25 Aligned_cols=35 Identities=17% Similarity=0.043 Sum_probs=27.4
Q ss_pred CCEEEEEcCCCccChHHHHHHHHHHHh-CCCEEEEEeCc
Q 012594 4 EPHVLVIPFPAQGHAGPLMKLSTKIAE-HGIKVTFVSTE 41 (460)
Q Consensus 4 ~~~Il~~~~~~~gH~~p~~~La~~L~~-rGh~V~~~~~~ 41 (460)
..|+++++.++.| --.++|+.|++ +|.+|.++...
T Consensus 60 ~gKvaLVTGASsG---IG~AiA~~LA~~~GA~Vv~~~r~ 95 (422)
T 3s8m_A 60 GPKKVLVIGASSG---YGLASRITAAFGFGADTLGVFFE 95 (422)
T ss_dssp SCSEEEEESCSSH---HHHHHHHHHHHHHCCEEEEEECC
T ss_pred CCCEEEEECCChH---HHHHHHHHHHHhCCCEEEEEeCC
Confidence 4578889877765 24688999999 99999988643
No 493
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=26.20 E-value=94 Score=26.31 Aligned_cols=43 Identities=12% Similarity=0.141 Sum_probs=28.7
Q ss_pred HHHHHHHhhcCCCCCccEEEeCCCcc--hHHHHHHHh----CCceEEEcccch
Q 012594 96 RNLIEKVNKSNDCEKISCVIADLTVG--WALEVAEQM----GIARAAVIPYAP 142 (460)
Q Consensus 96 ~~~l~~l~~~~~~~~~D~vv~D~~~~--~~~~~A~~l----giP~v~~~~~~~ 142 (460)
.+.++.+.. .+||+||.|...+ .+..+++.+ .+|+|+++....
T Consensus 71 ~~al~~~~~----~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~~ 119 (249)
T 3q9s_A 71 MNGLIKARE----DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDT 119 (249)
T ss_dssp HHHHHHHHH----SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCCS
T ss_pred HHHHHHHhc----CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCCC
Confidence 344444555 7899999998765 445555443 689998876654
No 494
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=26.19 E-value=1.1e+02 Score=22.69 Aligned_cols=31 Identities=16% Similarity=0.282 Sum_probs=19.9
Q ss_pred CCccEEEeCCCcc--hHHHHHHHh----------CCceEEEcc
Q 012594 109 EKISCVIADLTVG--WALEVAEQM----------GIARAAVIP 139 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~l----------giP~v~~~~ 139 (460)
.+||+||.|...+ .+..+++.+ .+|++.++.
T Consensus 53 ~~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~ 95 (140)
T 3c97_A 53 RQFDVIIMDIQMPVMDGLEAVSEIRNYERTHNTKRASIIAITA 95 (140)
T ss_dssp SCCSEEEECTTCCSSCHHHHHHHHHHHHHHHTCCCCCCEEEES
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHhhhhhcCCCceEEEEEeC
Confidence 7899999997654 444444433 456766553
No 495
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.16 E-value=35 Score=27.38 Aligned_cols=33 Identities=12% Similarity=0.152 Sum_probs=24.4
Q ss_pred CEEEEEcCCCccChHHHHHHHHHHHhC-CCEEEEEeCcc
Q 012594 5 PHVLVIPFPAQGHAGPLMKLSTKIAEH-GIKVTFVSTEH 42 (460)
Q Consensus 5 ~~Il~~~~~~~gH~~p~~~La~~L~~r-Gh~V~~~~~~~ 42 (460)
.||+++-.|..| ..+++.|.++ ||+|+++....
T Consensus 40 ~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIG-----TGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECCH
Confidence 478888544333 5678899999 99999987654
No 496
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=26.12 E-value=88 Score=25.67 Aligned_cols=35 Identities=11% Similarity=0.166 Sum_probs=28.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeC
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVST 40 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~ 40 (460)
.++++..|..|+-.-+..+++.|+++|+.|...-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 45666667777778889999999999999887754
No 497
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=26.10 E-value=79 Score=27.23 Aligned_cols=34 Identities=12% Similarity=0.086 Sum_probs=24.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCEEEEEeCcc
Q 012594 6 HVLVIPFPAQGHAGPLMKLSTKIAEHGIKVTFVSTEH 42 (460)
Q Consensus 6 ~Il~~~~~~~gH~~p~~~La~~L~~rGh~V~~~~~~~ 42 (460)
|.++++.++.| --.++++.|+++|++|+++....
T Consensus 32 k~vlITGasgg---IG~~la~~L~~~G~~V~~~~r~~ 65 (272)
T 1yb1_A 32 EIVLITGAGHG---IGRLTAYEFAKLKSKLVLWDINK 65 (272)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEEcCH
Confidence 56667655432 34688999999999999887643
No 498
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=26.09 E-value=1.2e+02 Score=22.39 Aligned_cols=32 Identities=9% Similarity=0.229 Sum_probs=21.2
Q ss_pred CCccEEEeCCCcc--hHHHHHHHhC-----CceEEEccc
Q 012594 109 EKISCVIADLTVG--WALEVAEQMG-----IARAAVIPY 140 (460)
Q Consensus 109 ~~~D~vv~D~~~~--~~~~~A~~lg-----iP~v~~~~~ 140 (460)
.+||+||.|.... .+..+++.+. +|+|.++..
T Consensus 54 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 92 (143)
T 2qv0_A 54 NKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAW 92 (143)
T ss_dssp CCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCC
Confidence 7899999997554 4566666552 456665544
No 499
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=26.08 E-value=1.1e+02 Score=23.07 Aligned_cols=47 Identities=11% Similarity=0.019 Sum_probs=34.0
Q ss_pred cCCceeeccccchhhhhHHHHHhhhcceeEeecCCCCccCHHHHHHHHHHHhc
Q 012594 367 MGVPFLCWPYFADQYQNRNYIFDAWKIGLRFFPDENGIITRQEIQRQVKALLN 419 (460)
Q Consensus 367 ~GvP~i~~P~~~dQ~~~a~~v~~~lg~g~~~~~~~~~~~~~~~l~~~i~~~l~ 419 (460)
..+|+|++--..+.... .+..+ .|+--.+. +.++.++|.++|+++++
T Consensus 86 ~~ipvI~lTa~~~~~~~-~~~~~-~Ga~~yl~----KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQI-IEAAQ-AGVNGYIV----KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHHH-HHHHH-TTCCEEEE----SSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHHH-HHHHH-CCCCEEEE----CCCCHHHHHHHHHHHHh
Confidence 57899888766555444 34445 48876664 67899999999999874
No 500
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=26.00 E-value=1.1e+02 Score=26.73 Aligned_cols=37 Identities=16% Similarity=0.143 Sum_probs=23.5
Q ss_pred CCCEEEEEc-CCCccChHH--HHHHHHHHHhCCCEEEEEe
Q 012594 3 REPHVLVIP-FPAQGHAGP--LMKLSTKIAEHGIKVTFVS 39 (460)
Q Consensus 3 ~~~~Il~~~-~~~~gH~~p--~~~La~~L~~rGh~V~~~~ 39 (460)
+.||||++. .|-...++- .-...+.|.++||+|+++-
T Consensus 21 ~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 21 QSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp -CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 346887554 454443433 2346778889999999873
Done!