Query 012596
Match_columns 460
No_of_seqs 299 out of 2254
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 12:32:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012596.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012596hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k96_A Glycerol-3-phosphate de 100.0 1E-55 3.6E-60 449.1 36.3 328 127-459 29-356 (356)
2 4fgw_A Glycerol-3-phosphate de 100.0 5.1E-52 1.8E-56 423.4 26.1 330 125-459 32-391 (391)
3 1evy_A Glycerol-3-phosphate de 100.0 2.2E-45 7.5E-50 374.4 31.1 343 113-460 2-351 (366)
4 1z82_A Glycerol-3-phosphate de 100.0 8.5E-44 2.9E-48 358.7 33.5 318 127-459 14-331 (335)
5 1yj8_A Glycerol-3-phosphate de 100.0 9.5E-44 3.3E-48 363.8 32.3 326 127-457 21-371 (375)
6 1x0v_A GPD-C, GPDH-C, glycerol 100.0 9.7E-43 3.3E-47 352.8 31.4 326 126-456 7-352 (354)
7 1txg_A Glycerol-3-phosphate de 100.0 3.4E-38 1.1E-42 316.6 31.6 318 128-454 1-334 (335)
8 3hwr_A 2-dehydropantoate 2-red 100.0 3.3E-33 1.1E-37 279.7 19.8 291 121-440 13-310 (318)
9 3hn2_A 2-dehydropantoate 2-red 100.0 3.6E-33 1.2E-37 278.5 19.9 283 127-441 2-302 (312)
10 3i83_A 2-dehydropantoate 2-red 100.0 6.5E-33 2.2E-37 277.6 19.6 281 127-440 2-300 (320)
11 3ghy_A Ketopantoate reductase 100.0 2.1E-32 7.2E-37 275.6 16.3 290 126-440 2-319 (335)
12 2ew2_A 2-dehydropantoate 2-red 100.0 2.7E-30 9.3E-35 256.1 19.7 288 126-440 2-308 (316)
13 3g17_A Similar to 2-dehydropan 100.0 1.4E-29 4.7E-34 250.5 16.0 273 127-440 2-282 (294)
14 3obb_A Probable 3-hydroxyisobu 100.0 6.4E-29 2.2E-33 246.5 18.4 276 127-452 3-295 (300)
15 2qyt_A 2-dehydropantoate 2-red 100.0 7.4E-29 2.5E-33 246.4 14.5 286 127-441 8-314 (317)
16 3ego_A Probable 2-dehydropanto 100.0 2.8E-28 9.5E-33 242.7 16.5 280 127-443 2-294 (307)
17 4a7p_A UDP-glucose dehydrogena 99.9 7.4E-27 2.5E-31 243.1 22.2 271 127-440 8-303 (446)
18 4gbj_A 6-phosphogluconate dehy 99.9 1.4E-27 4.6E-32 236.7 12.8 255 128-439 6-270 (297)
19 2y0c_A BCEC, UDP-glucose dehyd 99.9 2.9E-26 1E-30 241.1 20.0 277 126-443 7-312 (478)
20 3doj_A AT3G25530, dehydrogenas 99.9 1.1E-26 3.7E-31 231.5 15.8 277 125-453 19-307 (310)
21 3gg2_A Sugar dehydrogenase, UD 99.9 8.1E-26 2.8E-30 236.1 22.7 275 128-443 3-302 (450)
22 3qha_A Putative oxidoreductase 99.9 3.2E-26 1.1E-30 226.6 18.1 264 124-440 12-285 (296)
23 1ks9_A KPA reductase;, 2-dehyd 99.9 4.1E-27 1.4E-31 230.7 10.3 284 128-440 1-287 (291)
24 4dll_A 2-hydroxy-3-oxopropiona 99.9 1E-25 3.4E-30 225.5 19.2 271 126-453 30-315 (320)
25 3g0o_A 3-hydroxyisobutyrate de 99.9 1.5E-25 5.2E-30 222.3 19.8 279 126-455 6-297 (303)
26 3pdu_A 3-hydroxyisobutyrate de 99.9 2.3E-26 7.7E-31 226.4 13.4 261 127-439 1-266 (287)
27 2h78_A Hibadh, 3-hydroxyisobut 99.9 8.2E-25 2.8E-29 216.6 22.1 278 126-453 2-296 (302)
28 3pef_A 6-phosphogluconate dehy 99.9 1.8E-25 6.3E-30 219.9 17.1 261 128-439 2-266 (287)
29 1vpd_A Tartronate semialdehyde 99.9 4.9E-24 1.7E-28 210.4 21.6 259 127-439 5-270 (299)
30 3cky_A 2-hydroxymethyl glutara 99.9 1.1E-23 3.9E-28 207.9 22.7 260 124-439 1-270 (301)
31 2gf2_A Hibadh, 3-hydroxyisobut 99.9 2.4E-24 8.3E-29 212.2 17.8 262 128-439 1-272 (296)
32 4ezb_A Uncharacterized conserv 99.9 1.3E-24 4.4E-29 217.3 15.2 248 127-437 24-283 (317)
33 1mv8_A GMD, GDP-mannose 6-dehy 99.9 5.8E-24 2E-28 221.5 20.5 285 128-454 1-311 (436)
34 3qsg_A NAD-binding phosphogluc 99.9 3E-24 1E-28 214.1 17.1 255 126-439 23-283 (312)
35 2uyy_A N-PAC protein; long-cha 99.9 8.4E-24 2.9E-28 210.7 18.8 260 124-439 27-295 (316)
36 2zyd_A 6-phosphogluconate dehy 99.9 3E-24 1E-28 225.9 14.6 282 126-455 14-318 (480)
37 3g79_A NDP-N-acetyl-D-galactos 99.9 8.9E-24 3E-28 221.2 17.2 276 124-440 15-331 (478)
38 2cvz_A Dehydrogenase, 3-hydrox 99.9 3.9E-23 1.3E-27 202.6 19.7 252 127-439 1-261 (289)
39 3c7a_A Octopine dehydrogenase; 99.9 3.6E-24 1.2E-28 220.6 12.1 303 127-439 2-359 (404)
40 1yb4_A Tartronic semialdehyde 99.9 3.5E-23 1.2E-27 203.7 16.4 256 126-439 2-267 (295)
41 1bg6_A N-(1-D-carboxylethyl)-L 99.9 4.6E-22 1.6E-26 200.8 21.2 287 124-440 1-328 (359)
42 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.9 8.5E-23 2.9E-27 214.9 14.2 282 128-456 2-309 (478)
43 2o3j_A UDP-glucose 6-dehydroge 99.9 2.7E-22 9.2E-27 211.3 17.7 275 126-439 8-315 (481)
44 3l6d_A Putative oxidoreductase 99.9 2.7E-22 9.1E-27 199.4 16.6 261 126-439 8-274 (306)
45 2iz1_A 6-phosphogluconate dehy 99.9 2.9E-22 9.8E-27 210.7 15.3 279 127-455 5-310 (474)
46 4e21_A 6-phosphogluconate dehy 99.9 1.1E-21 3.7E-26 199.0 18.4 195 122-357 17-234 (358)
47 2q3e_A UDP-glucose 6-dehydroge 99.9 3.3E-21 1.1E-25 202.3 19.7 274 124-437 2-307 (467)
48 2pgd_A 6-phosphogluconate dehy 99.9 6.6E-22 2.2E-26 208.4 13.7 269 128-442 3-292 (482)
49 3ojo_A CAP5O; rossmann fold, c 99.9 2.7E-21 9.2E-26 200.0 16.3 262 126-438 10-295 (431)
50 4gwg_A 6-phosphogluconate dehy 99.9 2.7E-21 9.4E-26 202.7 15.8 265 126-438 3-290 (484)
51 2p4q_A 6-phosphogluconate dehy 99.9 2.9E-21 9.8E-26 203.9 15.4 260 127-434 10-290 (497)
52 3pid_A UDP-glucose 6-dehydroge 99.9 3E-21 1E-25 199.4 14.7 269 126-451 35-327 (432)
53 1i36_A Conserved hypothetical 99.9 3.2E-21 1.1E-25 186.9 13.1 243 128-442 1-250 (264)
54 1dlj_A UDP-glucose dehydrogena 99.8 6.1E-20 2.1E-24 189.1 19.5 260 128-440 1-289 (402)
55 3vtf_A UDP-glucose 6-dehydroge 99.8 1.1E-18 3.6E-23 180.5 23.4 279 126-451 20-324 (444)
56 2f1k_A Prephenate dehydrogenas 99.8 1.2E-18 4E-23 170.1 16.7 214 128-365 1-227 (279)
57 2izz_A Pyrroline-5-carboxylate 99.8 4.8E-18 1.6E-22 169.8 19.2 262 123-440 18-286 (322)
58 3dtt_A NADP oxidoreductase; st 99.8 2.7E-18 9.3E-23 165.0 13.1 168 127-310 19-215 (245)
59 2raf_A Putative dinucleotide-b 99.7 1.1E-17 3.7E-22 157.1 14.3 170 126-337 18-202 (209)
60 1yqg_A Pyrroline-5-carboxylate 99.7 8E-17 2.7E-21 155.6 17.9 250 128-441 1-255 (263)
61 3gt0_A Pyrroline-5-carboxylate 99.7 4.1E-16 1.4E-20 149.8 21.6 156 127-308 2-163 (247)
62 4huj_A Uncharacterized protein 99.7 1.1E-16 3.7E-21 151.4 17.0 168 124-312 20-202 (220)
63 3tri_A Pyrroline-5-carboxylate 99.7 3.5E-16 1.2E-20 153.4 20.6 154 126-305 2-161 (280)
64 3d1l_A Putative NADP oxidoredu 99.7 1E-15 3.4E-20 148.4 19.6 195 127-367 10-209 (266)
65 2g5c_A Prephenate dehydrogenas 99.7 6.5E-16 2.2E-20 150.9 16.4 173 127-320 1-185 (281)
66 2rcy_A Pyrroline carboxylate r 99.7 1.7E-15 5.7E-20 146.2 17.1 152 126-308 3-157 (262)
67 2dpo_A L-gulonate 3-dehydrogen 99.6 2.9E-15 1E-19 149.4 17.4 201 126-367 5-223 (319)
68 3c24_A Putative oxidoreductase 99.6 1.2E-15 4E-20 149.7 13.8 154 127-308 11-184 (286)
69 3b1f_A Putative prephenate deh 99.6 2.4E-15 8.3E-20 147.5 13.0 168 126-310 5-183 (290)
70 3ggo_A Prephenate dehydrogenas 99.6 3.9E-14 1.3E-18 141.1 20.4 165 127-312 33-209 (314)
71 4e12_A Diketoreductase; oxidor 99.6 6.5E-14 2.2E-18 137.3 20.8 202 124-366 1-220 (283)
72 2ahr_A Putative pyrroline carb 99.6 2E-13 6.8E-18 131.6 22.2 151 126-308 2-155 (259)
73 1jay_A Coenzyme F420H2:NADP+ o 99.6 7.1E-14 2.4E-18 130.5 18.2 180 128-322 1-195 (212)
74 1f0y_A HCDH, L-3-hydroxyacyl-C 99.6 1.6E-13 5.5E-18 135.5 21.2 200 127-366 15-234 (302)
75 2vns_A Metalloreductase steap3 99.5 7.2E-14 2.5E-18 131.5 15.8 162 127-310 28-196 (215)
76 2pv7_A T-protein [includes: ch 99.5 6.6E-14 2.2E-18 138.3 14.9 203 127-366 21-229 (298)
77 1zej_A HBD-9, 3-hydroxyacyl-CO 99.5 1.3E-13 4.4E-18 135.8 16.4 185 127-366 12-202 (293)
78 3k6j_A Protein F01G10.3, confi 99.5 6E-13 2.1E-17 138.3 21.7 198 126-366 53-264 (460)
79 2yjz_A Metalloreductase steap4 99.2 3.3E-15 1.1E-19 139.4 0.0 166 126-315 18-189 (201)
80 3mog_A Probable 3-hydroxybutyr 99.5 3.2E-13 1.1E-17 141.8 13.3 198 126-365 4-217 (483)
81 4e5n_A Thermostable phosphite 99.4 3E-14 1E-18 142.7 4.3 159 65-250 88-252 (330)
82 3ktd_A Prephenate dehydrogenas 99.4 3.1E-13 1.1E-17 135.9 11.5 165 127-315 8-194 (341)
83 3jtm_A Formate dehydrogenase, 99.4 4E-14 1.4E-18 142.7 4.4 159 65-249 107-271 (351)
84 2gcg_A Glyoxylate reductase/hy 99.4 5.6E-14 1.9E-18 140.8 4.6 160 65-250 97-262 (330)
85 4dgs_A Dehydrogenase; structur 99.4 9.4E-14 3.2E-18 139.4 6.2 145 65-239 114-264 (340)
86 2dbq_A Glyoxylate reductase; D 99.4 1E-13 3.5E-18 139.1 6.1 162 65-250 88-256 (334)
87 2wtb_A MFP2, fatty acid multif 99.4 3.6E-12 1.2E-16 140.2 18.8 198 126-366 311-524 (725)
88 3gg9_A D-3-phosphoglycerate de 99.4 1.8E-13 6.1E-18 138.1 7.7 162 65-250 96-267 (352)
89 4g2n_A D-isomer specific 2-hyd 99.4 6.2E-14 2.1E-18 141.0 4.3 158 65-249 115-278 (345)
90 3ba1_A HPPR, hydroxyphenylpyru 99.4 9.1E-14 3.1E-18 139.4 4.8 154 65-250 108-267 (333)
91 2pi1_A D-lactate dehydrogenase 99.4 1.4E-13 4.8E-18 138.0 5.7 147 65-240 85-237 (334)
92 1gdh_A D-glycerate dehydrogena 99.4 1.6E-13 5.4E-18 137.0 5.2 160 65-250 88-254 (320)
93 1wdk_A Fatty oxidation complex 99.4 1E-11 3.5E-16 136.4 18.7 197 126-366 313-526 (715)
94 3hg7_A D-isomer specific 2-hyd 99.4 1.8E-13 6.2E-18 136.5 4.0 151 67-249 89-245 (324)
95 2nac_A NAD-dependent formate d 99.4 2.1E-13 7.1E-18 139.3 4.5 159 65-249 134-298 (393)
96 1zcj_A Peroxisomal bifunctiona 99.4 3.2E-11 1.1E-15 126.1 21.1 166 126-310 36-217 (463)
97 2j6i_A Formate dehydrogenase; 99.4 2.6E-13 9E-18 137.6 4.8 158 67-250 109-273 (364)
98 2i76_A Hypothetical protein; N 99.4 8.3E-13 2.8E-17 128.8 7.8 151 127-307 2-153 (276)
99 2g76_A 3-PGDH, D-3-phosphoglyc 99.4 7.4E-13 2.5E-17 132.8 7.6 156 65-250 110-271 (335)
100 2yq5_A D-isomer specific 2-hyd 99.3 5.2E-13 1.8E-17 134.1 6.0 155 65-250 91-252 (343)
101 2d0i_A Dehydrogenase; structur 99.3 1.1E-13 3.6E-18 139.0 0.9 159 65-249 85-250 (333)
102 1j4a_A D-LDH, D-lactate dehydr 99.3 3.3E-13 1.1E-17 135.3 4.4 155 65-250 91-251 (333)
103 2ekl_A D-3-phosphoglycerate de 99.3 4E-13 1.4E-17 133.6 4.5 144 65-239 89-238 (313)
104 2w2k_A D-mandelate dehydrogena 99.3 3.8E-13 1.3E-17 135.7 4.0 152 65-239 101-262 (348)
105 1mx3_A CTBP1, C-terminal bindi 99.3 4E-13 1.4E-17 135.4 3.3 162 65-250 106-275 (347)
106 1wwk_A Phosphoglycerate dehydr 99.3 6.8E-13 2.3E-17 131.6 4.8 156 65-250 87-248 (307)
107 3evt_A Phosphoglycerate dehydr 99.3 1.8E-13 6.1E-18 136.6 0.3 154 65-249 82-242 (324)
108 4hy3_A Phosphoglycerate oxidor 99.3 1.4E-12 4.9E-17 131.8 6.2 150 65-240 118-273 (365)
109 1sc6_A PGDH, D-3-phosphoglycer 99.3 1.2E-12 4.2E-17 134.3 5.8 153 65-249 90-248 (404)
110 1dxy_A D-2-hydroxyisocaproate 99.3 1.4E-12 4.9E-17 130.7 5.7 154 65-249 89-248 (333)
111 1ygy_A PGDH, D-3-phosphoglycer 99.3 9.4E-13 3.2E-17 140.0 4.6 155 65-249 87-247 (529)
112 3k5p_A D-3-phosphoglycerate de 99.3 1.6E-12 5.5E-17 133.3 5.6 153 65-249 101-259 (416)
113 1xdw_A NAD+-dependent (R)-2-hy 99.3 1.5E-12 5.2E-17 130.4 5.0 155 65-250 90-250 (331)
114 2cuk_A Glycerate dehydrogenase 99.3 1.1E-12 3.8E-17 130.3 3.8 144 65-239 86-235 (311)
115 1qp8_A Formate dehydrogenase; 99.3 5.2E-12 1.8E-16 125.0 8.5 151 65-250 70-226 (303)
116 1np3_A Ketol-acid reductoisome 99.3 1.4E-10 4.9E-15 116.4 19.2 155 126-306 15-181 (338)
117 3gvx_A Glycerate dehydrogenase 99.3 8.2E-13 2.8E-17 129.8 1.4 149 66-250 71-225 (290)
118 3pp8_A Glyoxylate/hydroxypyruv 99.2 6.2E-13 2.1E-17 132.2 -0.2 153 65-249 85-244 (315)
119 3fr7_A Putative ketol-acid red 99.2 1.6E-10 5.4E-15 119.5 16.0 157 124-302 51-230 (525)
120 3ado_A Lambda-crystallin; L-gu 99.2 5.6E-10 1.9E-14 110.9 16.1 199 127-364 6-220 (319)
121 3kb6_A D-lactate dehydrogenase 99.1 3E-11 1E-15 121.1 5.4 147 65-240 85-237 (334)
122 3dfu_A Uncharacterized protein 99.1 9E-10 3.1E-14 104.4 13.3 131 127-312 6-137 (232)
123 1lld_A L-lactate dehydrogenase 99.0 1.2E-09 4.2E-14 108.2 11.4 103 127-239 7-130 (319)
124 1hyh_A L-hicdh, L-2-hydroxyiso 99.0 2.2E-09 7.5E-14 106.3 11.2 104 127-238 1-127 (309)
125 3oet_A Erythronate-4-phosphate 99.0 2.2E-10 7.6E-15 116.2 3.5 129 65-240 82-217 (381)
126 2o4c_A Erythronate-4-phosphate 98.9 6.1E-10 2.1E-14 113.1 4.8 137 65-249 79-222 (380)
127 2ewd_A Lactate dehydrogenase,; 98.9 8.1E-09 2.8E-13 102.5 11.2 106 124-237 1-125 (317)
128 1pzg_A LDH, lactate dehydrogen 98.8 1.6E-08 5.3E-13 101.2 10.1 103 127-236 9-135 (331)
129 1a5z_A L-lactate dehydrogenase 98.8 1.4E-08 4.9E-13 100.9 9.2 100 128-238 1-121 (319)
130 3zwc_A Peroxisomal bifunctiona 98.8 1.6E-07 5.4E-12 103.2 18.2 171 126-311 315-497 (742)
131 1lss_A TRK system potassium up 98.7 1.1E-07 3.8E-12 81.5 12.5 97 127-236 4-105 (140)
132 1obb_A Maltase, alpha-glucosid 98.7 2.8E-08 9.5E-13 103.8 10.0 80 126-209 2-87 (480)
133 2hjr_A Malate dehydrogenase; m 98.7 3.4E-08 1.2E-12 98.6 9.8 102 127-236 14-134 (328)
134 1u8x_X Maltose-6'-phosphate gl 98.7 1.7E-08 5.7E-13 105.5 7.6 119 126-252 27-185 (472)
135 1guz_A Malate dehydrogenase; o 98.7 3.2E-08 1.1E-12 98.0 9.2 104 128-237 1-122 (310)
136 2v6b_A L-LDH, L-lactate dehydr 98.7 6.5E-08 2.2E-12 95.5 11.2 100 128-237 1-120 (304)
137 2i99_A MU-crystallin homolog; 98.7 3.2E-08 1.1E-12 98.1 8.8 96 127-239 135-231 (312)
138 1t2d_A LDH-P, L-lactate dehydr 98.7 5.1E-08 1.7E-12 97.1 10.1 106 124-236 1-129 (322)
139 3oj0_A Glutr, glutamyl-tRNA re 98.6 2.9E-08 9.8E-13 86.7 5.9 92 127-235 21-112 (144)
140 2hk9_A Shikimate dehydrogenase 98.6 5.3E-08 1.8E-12 94.7 7.7 93 127-234 129-222 (275)
141 2rir_A Dipicolinate synthase, 98.6 2.7E-07 9.1E-12 90.8 11.2 93 126-235 156-248 (300)
142 1oju_A MDH, malate dehydrogena 98.6 2.8E-07 9.4E-12 90.6 10.9 103 128-236 1-121 (294)
143 1s6y_A 6-phospho-beta-glucosid 98.5 9.5E-08 3.2E-12 99.3 7.8 122 123-252 3-166 (450)
144 3d4o_A Dipicolinate synthase s 98.5 3.2E-07 1.1E-11 89.9 11.1 93 126-235 154-246 (293)
145 2g1u_A Hypothetical protein TM 98.5 3.8E-07 1.3E-11 80.6 9.9 102 127-237 19-122 (155)
146 3c85_A Putative glutathione-re 98.5 4.7E-07 1.6E-11 82.0 10.6 98 127-234 39-140 (183)
147 1v8b_A Adenosylhomocysteinase; 98.5 1.6E-07 5.4E-12 97.9 7.3 134 66-237 214-348 (479)
148 3d64_A Adenosylhomocysteinase; 98.5 2.1E-07 7.1E-12 97.3 8.1 135 66-237 234-368 (494)
149 3euw_A MYO-inositol dehydrogen 98.5 1.1E-06 3.8E-11 87.8 12.9 83 124-220 1-86 (344)
150 3llv_A Exopolyphosphatase-rela 98.5 1E-06 3.5E-11 76.2 10.9 94 127-233 6-103 (141)
151 3fwz_A Inner membrane protein 98.4 1.3E-06 4.5E-11 75.8 11.3 95 127-234 7-106 (140)
152 3gvi_A Malate dehydrogenase; N 98.4 4.2E-07 1.5E-11 90.4 9.1 103 126-236 6-127 (324)
153 3l4b_C TRKA K+ channel protien 98.4 8.1E-07 2.8E-11 82.9 10.2 100 128-236 1-102 (218)
154 1y81_A Conserved hypothetical 98.4 3E-07 1E-11 80.2 6.7 85 126-232 13-101 (138)
155 3fef_A Putative glucosidase LP 98.4 1.1E-06 3.7E-11 91.1 11.4 78 126-208 4-84 (450)
156 3ic5_A Putative saccharopine d 98.4 7.6E-07 2.6E-11 73.8 8.3 97 127-234 5-101 (118)
157 3uuw_A Putative oxidoreductase 98.4 1.2E-06 4E-11 86.2 10.6 93 125-236 4-99 (308)
158 1ur5_A Malate dehydrogenase; o 98.4 2.4E-06 8.1E-11 84.5 12.7 104 127-236 2-122 (309)
159 2d5c_A AROE, shikimate 5-dehyd 98.4 5.3E-07 1.8E-11 86.9 7.7 88 129-235 118-208 (263)
160 1x7d_A Ornithine cyclodeaminas 98.4 4.6E-07 1.6E-11 91.2 7.2 99 127-234 129-227 (350)
161 2i6t_A Ubiquitin-conjugating e 98.3 2E-06 6.8E-11 84.8 11.3 96 127-235 14-127 (303)
162 3db2_A Putative NADPH-dependen 98.3 1.8E-06 6.1E-11 86.7 10.9 81 124-219 2-86 (354)
163 1y6j_A L-lactate dehydrogenase 98.3 1.7E-06 5.7E-11 85.9 10.4 102 127-235 7-125 (318)
164 2dc1_A L-aspartate dehydrogena 98.3 2E-06 6.9E-11 81.4 10.2 82 128-236 1-84 (236)
165 3p7m_A Malate dehydrogenase; p 98.3 1.8E-06 6.1E-11 85.8 10.2 106 126-236 4-125 (321)
166 3q2i_A Dehydrogenase; rossmann 98.3 3.6E-06 1.2E-10 84.4 12.2 81 126-219 12-95 (354)
167 1ldn_A L-lactate dehydrogenase 98.3 2.9E-06 1E-10 84.1 11.2 106 126-236 5-126 (316)
168 3qy9_A DHPR, dihydrodipicolina 98.3 1.8E-06 6.1E-11 82.4 8.6 127 126-298 2-129 (243)
169 4hkt_A Inositol 2-dehydrogenas 98.3 4.5E-06 1.5E-10 82.9 11.7 79 127-220 3-84 (331)
170 3pqe_A L-LDH, L-lactate dehydr 98.3 4.7E-06 1.6E-10 82.9 11.6 102 126-236 4-125 (326)
171 2hmt_A YUAA protein; RCK, KTN, 98.2 4.3E-06 1.5E-10 71.7 9.7 96 127-235 6-106 (144)
172 1ez4_A Lactate dehydrogenase; 98.2 3.6E-06 1.2E-10 83.5 10.4 105 124-236 2-124 (318)
173 3tl2_A Malate dehydrogenase; c 98.2 2.5E-06 8.5E-11 84.6 9.0 106 125-236 6-130 (315)
174 3d0o_A L-LDH 1, L-lactate dehy 98.2 5.3E-06 1.8E-10 82.2 11.1 104 126-236 5-126 (317)
175 2duw_A Putative COA-binding pr 98.2 6.1E-07 2.1E-11 78.9 3.5 89 123-231 9-101 (145)
176 3ldh_A Lactate dehydrogenase; 98.2 4.7E-06 1.6E-10 82.9 10.3 104 126-236 20-141 (330)
177 3h9u_A Adenosylhomocysteinase; 98.2 3.7E-06 1.3E-10 86.3 9.7 92 126-236 210-301 (436)
178 3e9m_A Oxidoreductase, GFO/IDH 98.2 3.7E-06 1.3E-10 83.6 9.3 81 126-219 4-87 (330)
179 3fi9_A Malate dehydrogenase; s 98.2 9E-06 3.1E-10 81.4 12.0 103 124-236 5-129 (343)
180 3ezy_A Dehydrogenase; structur 98.2 8.5E-06 2.9E-10 81.3 11.6 107 127-250 2-113 (344)
181 3p2y_A Alanine dehydrogenase/p 98.2 2.5E-06 8.5E-11 86.4 7.3 105 127-233 184-302 (381)
182 3rc1_A Sugar 3-ketoreductase; 98.2 1.1E-05 3.9E-10 80.8 12.0 82 125-220 25-110 (350)
183 3mz0_A Inositol 2-dehydrogenas 98.1 1.6E-05 5.5E-10 79.3 12.9 81 127-219 2-86 (344)
184 2d4a_B Malate dehydrogenase; a 98.1 4.8E-06 1.6E-10 82.3 8.9 102 129-235 1-118 (308)
185 2ho3_A Oxidoreductase, GFO/IDH 98.1 1.7E-05 5.9E-10 78.4 12.8 88 127-230 1-90 (325)
186 1id1_A Putative potassium chan 98.1 9.1E-06 3.1E-10 71.3 9.5 102 126-236 2-108 (153)
187 2zqz_A L-LDH, L-lactate dehydr 98.1 1E-05 3.5E-10 80.5 10.7 103 126-236 8-128 (326)
188 3ec7_A Putative dehydrogenase; 98.1 1.9E-05 6.4E-10 79.4 12.2 82 126-220 22-108 (357)
189 3vku_A L-LDH, L-lactate dehydr 98.1 1.8E-05 6.1E-10 78.7 11.6 103 126-236 8-128 (326)
190 2xxj_A L-LDH, L-lactate dehydr 98.1 1.4E-05 4.9E-10 78.9 10.9 101 128-236 1-119 (310)
191 3hdj_A Probable ornithine cycl 98.1 4.2E-06 1.4E-10 82.8 6.9 89 127-234 121-214 (313)
192 3ulk_A Ketol-acid reductoisome 98.1 1.7E-05 5.8E-10 80.9 11.3 99 120-237 31-135 (491)
193 4dio_A NAD(P) transhydrogenase 98.1 4.5E-06 1.5E-10 85.1 7.2 105 127-233 190-312 (405)
194 3nep_X Malate dehydrogenase; h 98.1 8.9E-06 3E-10 80.5 9.1 105 128-236 1-121 (314)
195 4aj2_A L-lactate dehydrogenase 98.1 1.7E-05 5.8E-10 79.0 11.2 106 124-236 16-139 (331)
196 1omo_A Alanine dehydrogenase; 98.1 8.4E-06 2.9E-10 81.0 8.7 93 127-233 125-217 (322)
197 3abi_A Putative uncharacterize 98.0 8.6E-06 2.9E-10 82.1 8.8 82 126-218 15-96 (365)
198 3e18_A Oxidoreductase; dehydro 98.0 2.2E-05 7.6E-10 78.9 11.4 93 125-236 3-98 (359)
199 1tlt_A Putative oxidoreductase 98.0 1.3E-05 4.5E-10 79.0 9.6 88 125-230 3-93 (319)
200 3ce6_A Adenosylhomocysteinase; 98.0 1E-05 3.6E-10 84.7 9.1 91 126-235 273-363 (494)
201 3cea_A MYO-inositol 2-dehydrog 98.0 2.2E-05 7.5E-10 78.2 11.1 88 126-230 7-99 (346)
202 3u62_A Shikimate dehydrogenase 98.0 2.5E-06 8.6E-11 81.9 4.0 91 129-235 110-202 (253)
203 2glx_A 1,5-anhydro-D-fructose 98.0 3.6E-05 1.2E-09 76.1 12.4 85 128-230 1-90 (332)
204 1ydw_A AX110P-like protein; st 98.0 1.9E-05 6.5E-10 79.3 10.3 98 123-234 2-102 (362)
205 1mld_A Malate dehydrogenase; o 98.0 3.4E-05 1.2E-09 76.3 11.8 100 128-236 1-120 (314)
206 3gvp_A Adenosylhomocysteinase 98.0 9.9E-06 3.4E-10 82.9 8.0 91 126-236 219-310 (435)
207 1xea_A Oxidoreductase, GFO/IDH 98.0 2.4E-05 8.3E-10 77.3 10.7 79 127-219 2-83 (323)
208 4f3y_A DHPR, dihydrodipicolina 98.0 1.2E-05 4.1E-10 77.9 8.0 149 126-305 6-156 (272)
209 2z2v_A Hypothetical protein PH 98.0 1.7E-05 5.8E-10 80.2 9.2 95 126-234 15-109 (365)
210 3c1a_A Putative oxidoreductase 98.0 1.1E-05 3.9E-10 79.4 7.8 86 126-230 9-97 (315)
211 3n58_A Adenosylhomocysteinase; 98.0 2.5E-05 8.4E-10 80.2 9.9 91 126-236 246-337 (464)
212 3bio_A Oxidoreductase, GFO/IDH 97.9 3.4E-05 1.1E-09 75.9 10.2 87 126-232 8-95 (304)
213 2egg_A AROE, shikimate 5-dehyd 97.9 1E-05 3.6E-10 79.4 6.3 98 126-234 140-241 (297)
214 3evn_A Oxidoreductase, GFO/IDH 97.9 1.4E-05 4.9E-10 79.2 7.3 80 126-219 4-87 (329)
215 2x0j_A Malate dehydrogenase; o 97.9 5.7E-05 2E-09 73.9 11.2 102 128-237 1-122 (294)
216 3ohs_X Trans-1,2-dihydrobenzen 97.9 3.7E-05 1.3E-09 76.3 10.0 81 127-219 2-86 (334)
217 3m2t_A Probable dehydrogenase; 97.9 2.2E-05 7.6E-10 78.9 8.4 96 125-237 3-102 (359)
218 4had_A Probable oxidoreductase 97.9 5.6E-05 1.9E-09 75.4 11.0 96 125-237 21-120 (350)
219 3l9w_A Glutathione-regulated p 97.9 4.7E-05 1.6E-09 78.2 10.5 99 127-234 4-103 (413)
220 3u3x_A Oxidoreductase; structu 97.9 5.4E-05 1.9E-09 76.2 10.6 97 123-237 22-122 (361)
221 3ijp_A DHPR, dihydrodipicolina 97.9 4.3E-05 1.5E-09 74.5 9.3 153 123-305 17-171 (288)
222 2p2s_A Putative oxidoreductase 97.8 4.6E-05 1.6E-09 75.6 9.6 79 126-218 3-85 (336)
223 1b8p_A Protein (malate dehydro 97.8 8.7E-05 3E-09 73.8 11.6 101 127-235 5-135 (329)
224 3kux_A Putative oxidoreductase 97.8 0.0001 3.5E-09 73.7 11.4 94 124-237 4-101 (352)
225 3don_A Shikimate dehydrogenase 97.8 6.8E-06 2.3E-10 79.9 2.4 93 127-234 117-211 (277)
226 1smk_A Malate dehydrogenase, g 97.8 7.2E-05 2.5E-09 74.3 9.8 101 126-237 7-129 (326)
227 3moi_A Probable dehydrogenase; 97.8 9.4E-05 3.2E-09 75.0 10.8 79 127-219 2-84 (387)
228 2vhw_A Alanine dehydrogenase; 97.8 2.2E-05 7.6E-10 79.6 6.0 96 126-233 167-268 (377)
229 2d59_A Hypothetical protein PH 97.8 5.2E-05 1.8E-09 66.3 7.5 91 123-237 18-112 (144)
230 4gqa_A NAD binding oxidoreduct 97.7 8.5E-05 2.9E-09 75.9 10.0 102 121-238 20-131 (412)
231 1x13_A NAD(P) transhydrogenase 97.7 3.2E-05 1.1E-09 79.2 6.7 106 126-233 171-292 (401)
232 2nu8_A Succinyl-COA ligase [AD 97.7 0.00013 4.5E-09 71.2 10.7 106 125-250 5-113 (288)
233 3f4l_A Putative oxidoreductase 97.7 5.2E-05 1.8E-09 75.6 8.0 107 127-250 2-114 (345)
234 1h6d_A Precursor form of gluco 97.7 8.2E-05 2.8E-09 76.8 9.5 85 125-219 81-170 (433)
235 2ixa_A Alpha-N-acetylgalactosa 97.7 0.00025 8.6E-09 73.3 12.3 83 124-218 17-110 (444)
236 2eez_A Alanine dehydrogenase; 97.7 4.5E-05 1.5E-09 77.1 6.4 95 127-233 166-266 (369)
237 1zh8_A Oxidoreductase; TM0312, 97.7 0.00018 6.3E-09 71.6 10.7 95 127-237 18-116 (340)
238 1f06_A MESO-diaminopimelate D- 97.7 3.1E-05 1.1E-09 76.7 5.0 84 126-231 2-87 (320)
239 3e82_A Putative oxidoreductase 97.6 0.00036 1.2E-08 70.1 12.6 91 126-236 6-100 (364)
240 3upl_A Oxidoreductase; rossman 97.6 0.00041 1.4E-08 71.5 13.0 108 124-235 20-141 (446)
241 3v5n_A Oxidoreductase; structu 97.6 0.00011 3.6E-09 75.5 8.6 97 125-237 35-144 (417)
242 1l7d_A Nicotinamide nucleotide 97.6 8.8E-05 3E-09 75.4 7.8 106 126-233 171-294 (384)
243 2nvw_A Galactose/lactose metab 97.6 0.00022 7.5E-09 74.6 10.7 83 125-218 37-127 (479)
244 3gdo_A Uncharacterized oxidore 97.6 0.00029 9.9E-09 70.6 11.1 92 126-237 4-99 (358)
245 4g65_A TRK system potassium up 97.6 8.9E-05 3.1E-09 77.2 7.3 87 126-221 2-90 (461)
246 1p77_A Shikimate 5-dehydrogena 97.6 8.2E-05 2.8E-09 71.9 6.5 96 126-234 118-215 (272)
247 3dty_A Oxidoreductase, GFO/IDH 97.6 0.00011 3.6E-09 74.9 7.6 97 125-237 10-119 (398)
248 3o8q_A Shikimate 5-dehydrogena 97.5 9.2E-05 3.1E-09 72.1 6.5 96 126-234 125-222 (281)
249 1iuk_A Hypothetical protein TT 97.5 9.5E-05 3.2E-09 64.3 5.8 90 126-237 12-105 (140)
250 1nyt_A Shikimate 5-dehydrogena 97.5 0.00022 7.4E-09 68.8 8.7 96 126-234 118-215 (271)
251 3btv_A Galactose/lactose metab 97.5 0.00018 6.1E-09 74.3 8.5 81 126-218 19-108 (438)
252 2vt3_A REX, redox-sensing tran 97.5 6.2E-05 2.1E-09 70.3 4.5 81 126-221 84-167 (215)
253 1gpj_A Glutamyl-tRNA reductase 97.5 0.00025 8.6E-09 72.5 9.5 95 126-234 166-267 (404)
254 3u95_A Glycoside hydrolase, fa 97.5 0.0001 3.4E-09 77.1 6.5 78 128-207 1-84 (477)
255 2aef_A Calcium-gated potassium 97.5 0.00013 4.4E-09 68.5 6.7 93 127-233 9-105 (234)
256 1oi7_A Succinyl-COA synthetase 97.5 0.00052 1.8E-08 66.9 11.2 105 125-250 5-113 (288)
257 4h3v_A Oxidoreductase domain p 97.5 0.00032 1.1E-08 70.3 10.0 96 127-238 6-110 (390)
258 4fb5_A Probable oxidoreductase 97.5 0.00036 1.2E-08 70.0 10.3 96 127-238 25-129 (393)
259 3hhp_A Malate dehydrogenase; M 97.5 0.00073 2.5E-08 66.7 11.9 100 128-236 1-121 (312)
260 1o6z_A MDH, malate dehydrogena 97.5 0.00049 1.7E-08 67.6 10.4 103 128-236 1-122 (303)
261 3oqb_A Oxidoreductase; structu 97.4 0.00036 1.2E-08 70.4 9.5 95 126-237 5-117 (383)
262 4gmf_A Yersiniabactin biosynth 97.4 0.00037 1.3E-08 70.5 8.9 106 127-250 7-117 (372)
263 2yv1_A Succinyl-COA ligase [AD 97.4 0.0014 4.8E-08 64.0 12.5 107 123-250 9-119 (294)
264 4h7p_A Malate dehydrogenase; s 97.4 0.0012 4.1E-08 66.0 11.9 105 127-237 24-154 (345)
265 3mtj_A Homoserine dehydrogenas 97.4 0.00073 2.5E-08 69.8 10.6 109 124-250 7-127 (444)
266 3pwz_A Shikimate dehydrogenase 97.3 0.00032 1.1E-08 67.9 7.3 95 127-234 120-216 (272)
267 7mdh_A Protein (malate dehydro 97.3 0.00055 1.9E-08 69.1 9.1 110 121-236 26-161 (375)
268 1up7_A 6-phospho-beta-glucosid 97.3 0.00072 2.5E-08 69.3 10.2 113 127-252 2-155 (417)
269 3ond_A Adenosylhomocysteinase; 97.3 0.00068 2.3E-08 70.5 10.1 90 126-235 264-354 (488)
270 3fhl_A Putative oxidoreductase 97.3 0.00056 1.9E-08 68.6 9.1 78 126-219 4-85 (362)
271 3phh_A Shikimate dehydrogenase 97.3 0.0003 1E-08 67.9 6.8 90 127-234 118-210 (269)
272 1dih_A Dihydrodipicolinate red 97.3 0.0004 1.4E-08 67.2 7.7 150 126-305 4-155 (273)
273 3i23_A Oxidoreductase, GFO/IDH 97.3 0.00045 1.5E-08 68.9 8.3 93 127-237 2-99 (349)
274 3rui_A Ubiquitin-like modifier 97.3 0.00044 1.5E-08 68.8 7.9 36 126-162 33-68 (340)
275 1nvm_B Acetaldehyde dehydrogen 97.3 0.00053 1.8E-08 67.6 8.3 96 124-233 1-104 (312)
276 2yv2_A Succinyl-COA synthetase 97.3 0.0026 8.7E-08 62.3 13.0 105 125-250 11-120 (297)
277 2axq_A Saccharopine dehydrogen 97.3 0.00072 2.4E-08 70.4 9.5 79 126-212 22-101 (467)
278 2ozp_A N-acetyl-gamma-glutamyl 97.3 0.00041 1.4E-08 69.4 7.3 101 124-236 1-102 (345)
279 4ina_A Saccharopine dehydrogen 97.3 0.00032 1.1E-08 71.7 6.6 90 127-217 1-94 (405)
280 2czc_A Glyceraldehyde-3-phosph 97.2 0.00045 1.5E-08 68.8 7.3 89 127-216 2-96 (334)
281 1pjc_A Protein (L-alanine dehy 97.2 0.00038 1.3E-08 70.0 6.8 96 127-233 167-267 (361)
282 3jyo_A Quinate/shikimate dehyd 97.2 0.00045 1.5E-08 67.2 7.0 100 126-233 126-229 (283)
283 1p9l_A Dihydrodipicolinate red 97.2 0.0019 6.6E-08 61.4 11.2 103 128-269 1-107 (245)
284 4ew6_A D-galactose-1-dehydroge 97.2 0.00065 2.2E-08 67.4 8.2 87 126-237 24-115 (330)
285 3e8x_A Putative NAD-dependent 97.2 0.0009 3.1E-08 62.3 8.6 72 126-208 20-93 (236)
286 3o9z_A Lipopolysaccaride biosy 97.2 0.0006 2.1E-08 67.1 7.7 94 126-238 2-107 (312)
287 3ius_A Uncharacterized conserv 97.2 0.0011 3.9E-08 63.3 9.3 69 127-209 5-73 (286)
288 3oa2_A WBPB; oxidoreductase, s 97.2 0.00067 2.3E-08 66.9 7.6 93 126-237 2-107 (318)
289 1jw9_B Molybdopterin biosynthe 97.2 0.0011 3.6E-08 63.3 8.6 98 127-232 31-152 (249)
290 3r6d_A NAD-dependent epimerase 97.1 0.00036 1.2E-08 64.4 5.1 75 128-209 6-83 (221)
291 1npy_A Hypothetical shikimate 97.1 0.00081 2.8E-08 65.0 7.7 91 127-234 119-214 (271)
292 1leh_A Leucine dehydrogenase; 97.1 0.001 3.4E-08 67.0 8.6 89 126-236 172-263 (364)
293 1ff9_A Saccharopine reductase; 97.1 0.00042 1.4E-08 71.8 5.7 79 126-211 2-80 (450)
294 3dfz_A SIRC, precorrin-2 dehyd 97.0 0.0031 1.1E-07 59.0 10.5 80 127-219 31-111 (223)
295 3h2s_A Putative NADH-flavin re 97.0 0.0051 1.7E-07 56.3 11.7 71 128-209 1-72 (224)
296 1b7g_O Protein (glyceraldehyde 97.0 0.0014 4.9E-08 65.3 8.1 101 128-233 2-108 (340)
297 3fbt_A Chorismate mutase and s 97.0 0.001 3.4E-08 64.7 6.7 91 126-233 121-214 (282)
298 3ngx_A Bifunctional protein fo 97.0 0.0012 4E-08 63.7 7.0 73 126-233 149-222 (276)
299 2dt5_A AT-rich DNA-binding pro 97.0 0.00031 1.1E-08 65.4 2.8 81 127-221 80-162 (211)
300 5mdh_A Malate dehydrogenase; o 97.0 0.0033 1.1E-07 62.5 10.4 103 127-235 3-131 (333)
301 3dr3_A N-acetyl-gamma-glutamyl 97.0 0.0012 4.3E-08 65.7 7.3 100 127-236 4-109 (337)
302 1u8f_O GAPDH, glyceraldehyde-3 97.0 0.0058 2E-07 60.8 12.1 104 127-234 3-123 (335)
303 4gsl_A Ubiquitin-like modifier 97.0 0.0013 4.6E-08 69.9 7.9 35 127-162 326-360 (615)
304 1hye_A L-lactate/malate dehydr 96.9 0.0037 1.3E-07 61.5 10.5 101 128-236 1-125 (313)
305 1y7t_A Malate dehydrogenase; N 96.9 0.0018 6.2E-08 64.0 8.3 78 124-207 1-88 (327)
306 3ip3_A Oxidoreductase, putativ 96.9 0.00061 2.1E-08 67.6 4.8 93 127-238 2-102 (337)
307 1xyg_A Putative N-acetyl-gamma 96.9 0.0015 5.2E-08 65.6 7.5 101 125-236 14-115 (359)
308 2nqt_A N-acetyl-gamma-glutamyl 96.9 0.00084 2.9E-08 67.3 5.3 160 126-302 8-177 (352)
309 1a4i_A Methylenetetrahydrofola 96.9 0.0023 7.8E-08 62.4 8.0 73 126-233 164-237 (301)
310 3ff4_A Uncharacterized protein 96.8 0.0012 4E-08 56.0 5.2 88 127-239 4-95 (122)
311 3ing_A Homoserine dehydrogenas 96.8 0.0018 6.3E-08 64.1 7.4 99 126-236 3-120 (325)
312 2c2x_A Methylenetetrahydrofola 96.8 0.002 6.8E-08 62.2 7.3 73 126-233 157-232 (281)
313 3l07_A Bifunctional protein fo 96.8 0.0026 8.8E-08 61.6 8.0 73 126-233 160-233 (285)
314 4a26_A Putative C-1-tetrahydro 96.8 0.0018 6.1E-08 63.2 6.9 73 126-233 164-239 (300)
315 3p2o_A Bifunctional protein fo 96.8 0.0023 8E-08 61.9 7.7 73 126-233 159-232 (285)
316 3tnl_A Shikimate dehydrogenase 96.8 0.002 6.7E-08 63.6 7.2 98 126-233 153-263 (315)
317 1b0a_A Protein (fold bifunctio 96.8 0.0018 6E-08 62.8 6.7 72 126-233 158-231 (288)
318 2ejw_A HDH, homoserine dehydro 96.8 0.00034 1.2E-08 69.6 1.7 89 126-234 2-99 (332)
319 2ep5_A 350AA long hypothetical 96.8 0.0024 8.4E-08 63.9 7.9 103 124-234 1-109 (350)
320 1lnq_A MTHK channels, potassiu 96.8 0.0017 5.8E-08 64.3 6.5 96 127-233 115-211 (336)
321 1edz_A 5,10-methylenetetrahydr 96.7 0.0015 5E-08 64.5 5.7 96 126-234 176-276 (320)
322 3eag_A UDP-N-acetylmuramate:L- 96.7 0.0042 1.4E-07 61.4 9.1 66 127-206 4-73 (326)
323 3h2z_A Mannitol-1-phosphate 5- 96.7 0.003 1E-07 63.9 8.1 110 128-239 1-127 (382)
324 3dhn_A NAD-dependent epimerase 96.7 0.00032 1.1E-08 64.8 0.8 75 124-208 1-76 (227)
325 2fp4_A Succinyl-COA ligase [GD 96.7 0.0089 3.1E-07 58.6 11.2 94 126-239 12-109 (305)
326 1j5p_A Aspartate dehydrogenase 96.7 0.0017 6E-08 61.8 5.7 83 126-236 11-94 (253)
327 3ew7_A LMO0794 protein; Q8Y8U8 96.7 0.0043 1.5E-07 56.5 8.1 70 128-209 1-71 (221)
328 3keo_A Redox-sensing transcrip 96.6 0.0021 7E-08 59.8 5.6 81 127-221 84-170 (212)
329 4a5o_A Bifunctional protein fo 96.6 0.0036 1.2E-07 60.6 7.4 73 126-233 160-233 (286)
330 1cf2_P Protein (glyceraldehyde 96.6 0.0029 1E-07 63.0 7.1 103 127-233 1-109 (337)
331 1ys4_A Aspartate-semialdehyde 96.5 0.0056 1.9E-07 61.3 8.6 101 127-234 8-115 (354)
332 1lc0_A Biliverdin reductase A; 96.5 0.0058 2E-07 59.4 8.1 74 126-218 6-84 (294)
333 1vl6_A Malate oxidoreductase; 96.5 0.0058 2E-07 61.6 8.2 93 127-236 192-297 (388)
334 3t4e_A Quinate/shikimate dehyd 96.4 0.005 1.7E-07 60.6 7.3 98 127-233 148-257 (312)
335 3qvo_A NMRA family protein; st 96.4 0.00077 2.6E-08 63.0 1.2 77 126-210 22-99 (236)
336 1qyd_A Pinoresinol-lariciresin 96.4 0.0037 1.3E-07 60.4 6.1 77 126-209 3-86 (313)
337 3do5_A HOM, homoserine dehydro 96.4 0.0061 2.1E-07 60.4 7.5 97 127-235 2-117 (327)
338 2hjs_A USG-1 protein homolog; 96.3 0.0028 9.5E-08 63.2 4.8 95 124-234 3-100 (340)
339 3vh1_A Ubiquitin-like modifier 96.3 0.0047 1.6E-07 65.7 6.6 34 127-161 327-360 (598)
340 3c8m_A Homoserine dehydrogenas 96.3 0.0081 2.8E-07 59.6 8.0 99 124-235 3-123 (331)
341 1hdo_A Biliverdin IX beta redu 96.3 0.0012 4E-08 59.6 1.7 36 127-164 3-39 (206)
342 1qyc_A Phenylcoumaran benzylic 96.3 0.003 1E-07 60.9 4.7 86 126-220 3-101 (308)
343 1zud_1 Adenylyltransferase THI 96.3 0.0028 9.6E-08 60.4 4.4 35 127-162 28-62 (251)
344 2yyy_A Glyceraldehyde-3-phosph 96.3 0.016 5.5E-07 57.7 10.1 102 127-231 2-111 (343)
345 3e5r_O PP38, glyceraldehyde-3- 96.3 0.014 4.8E-07 58.0 9.6 103 127-233 3-126 (337)
346 4dpl_A Malonyl-COA/succinyl-CO 96.3 0.0033 1.1E-07 63.1 5.0 105 124-235 4-112 (359)
347 4dpk_A Malonyl-COA/succinyl-CO 96.3 0.0033 1.1E-07 63.1 5.0 105 124-235 4-112 (359)
348 1nvt_A Shikimate 5'-dehydrogen 96.1 0.0076 2.6E-07 58.3 6.7 101 126-234 127-231 (287)
349 2r00_A Aspartate-semialdehyde 96.1 0.0044 1.5E-07 61.7 4.7 93 126-234 2-97 (336)
350 2ph5_A Homospermidine synthase 96.0 0.0083 2.8E-07 62.1 6.5 95 127-234 13-115 (480)
351 3lk7_A UDP-N-acetylmuramoylala 96.0 0.012 4.2E-07 60.6 7.8 66 127-206 9-79 (451)
352 3hsk_A Aspartate-semialdehyde 96.0 0.0093 3.2E-07 60.3 6.5 102 126-235 18-126 (381)
353 3pwk_A Aspartate-semialdehyde 95.9 0.0077 2.6E-07 60.6 5.6 93 127-235 2-97 (366)
354 1y1p_A ARII, aldehyde reductas 95.9 0.026 8.8E-07 54.9 9.2 75 126-208 10-92 (342)
355 3e48_A Putative nucleoside-dip 95.8 0.0056 1.9E-07 58.5 4.2 73 128-209 1-75 (289)
356 3i6i_A Putative leucoanthocyan 95.8 0.0068 2.3E-07 59.7 4.9 87 126-221 9-108 (346)
357 2x4g_A Nucleoside-diphosphate- 95.8 0.0038 1.3E-07 61.0 3.0 74 126-208 12-86 (342)
358 3cps_A Glyceraldehyde 3-phosph 95.8 0.032 1.1E-06 55.8 9.5 109 121-233 11-138 (354)
359 2gas_A Isoflavone reductase; N 95.8 0.007 2.4E-07 58.2 4.7 84 127-219 2-99 (307)
360 3c1o_A Eugenol synthase; pheny 95.8 0.0074 2.5E-07 58.6 4.8 87 126-221 3-102 (321)
361 2r6j_A Eugenol synthase 1; phe 95.6 0.0088 3E-07 58.0 4.7 84 128-220 12-103 (318)
362 4hb9_A Similarities with proba 95.6 0.009 3.1E-07 59.5 4.8 33 128-162 2-34 (412)
363 1xq6_A Unknown protein; struct 95.6 0.025 8.4E-07 52.4 7.5 73 126-208 3-78 (253)
364 4g65_A TRK system potassium up 95.6 0.078 2.7E-06 54.9 11.9 93 127-230 235-331 (461)
365 3dqp_A Oxidoreductase YLBE; al 95.6 0.0053 1.8E-07 56.3 2.8 35 128-164 1-36 (219)
366 2wm3_A NMRA-like family domain 95.6 0.011 3.8E-07 56.8 5.1 75 126-208 4-81 (299)
367 4b4o_A Epimerase family protei 95.5 0.012 4.2E-07 56.5 5.3 33 128-162 1-34 (298)
368 3gpi_A NAD-dependent epimerase 95.5 0.011 3.8E-07 56.4 4.9 36 126-163 2-37 (286)
369 3h8v_A Ubiquitin-like modifier 95.5 0.023 7.8E-07 55.3 7.1 36 126-162 35-70 (292)
370 1vkn_A N-acetyl-gamma-glutamyl 95.5 0.021 7.3E-07 57.0 7.0 98 126-236 12-110 (351)
371 1t4b_A Aspartate-semialdehyde 95.5 0.05 1.7E-06 54.6 9.8 95 127-235 1-100 (367)
372 3h5n_A MCCB protein; ubiquitin 95.5 0.1 3.5E-06 52.1 12.0 36 126-162 117-152 (353)
373 3kkj_A Amine oxidase, flavin-c 95.5 0.011 3.8E-07 53.6 4.5 33 128-162 3-35 (336)
374 1c1d_A L-phenylalanine dehydro 95.4 0.048 1.6E-06 54.5 9.3 90 126-237 174-265 (355)
375 3ruf_A WBGU; rossmann fold, UD 95.4 0.016 5.5E-07 56.8 5.8 77 125-208 23-109 (351)
376 3m2p_A UDP-N-acetylglucosamine 95.4 0.014 4.7E-07 56.4 5.2 69 127-208 2-71 (311)
377 2csu_A 457AA long hypothetical 95.3 0.058 2E-06 55.8 9.8 90 126-237 7-100 (457)
378 4gx0_A TRKA domain protein; me 95.3 0.017 5.8E-07 61.2 5.7 94 128-234 349-443 (565)
379 3sju_A Keto reductase; short-c 95.2 0.062 2.1E-06 51.3 9.0 47 122-170 19-66 (279)
380 2jl1_A Triphenylmethane reduct 95.2 0.0074 2.5E-07 57.4 2.4 72 128-208 1-75 (287)
381 2gn4_A FLAA1 protein, UDP-GLCN 95.2 0.025 8.4E-07 56.0 6.2 78 124-208 18-100 (344)
382 3slg_A PBGP3 protein; structur 95.1 0.0081 2.8E-07 59.6 2.6 39 126-166 23-63 (372)
383 1lu9_A Methylene tetrahydromet 95.1 0.037 1.3E-06 53.3 7.2 78 126-209 118-198 (287)
384 3tz6_A Aspartate-semialdehyde 95.1 0.046 1.6E-06 54.4 7.9 92 128-234 2-95 (344)
385 1pjq_A CYSG, siroheme synthase 95.1 0.22 7.5E-06 51.4 13.4 71 127-211 12-84 (457)
386 3tum_A Shikimate dehydrogenase 95.1 0.029 1E-06 53.9 6.2 97 127-233 125-225 (269)
387 2bka_A CC3, TAT-interacting pr 95.0 0.0078 2.7E-07 55.8 2.0 74 126-208 17-93 (242)
388 2a9f_A Putative malic enzyme ( 94.9 0.037 1.3E-06 55.8 6.6 97 127-236 188-292 (398)
389 1c0p_A D-amino acid oxidase; a 94.9 0.028 9.6E-07 55.5 5.7 34 126-161 5-38 (363)
390 3hn7_A UDP-N-acetylmuramate-L- 94.8 0.073 2.5E-06 56.0 9.1 74 122-209 14-92 (524)
391 3rkr_A Short chain oxidoreduct 94.8 0.083 2.9E-06 49.8 8.6 42 127-170 29-71 (262)
392 3enk_A UDP-glucose 4-epimerase 94.7 0.017 5.8E-07 56.4 3.7 38 124-163 2-40 (341)
393 2b0j_A 5,10-methenyltetrahydro 94.7 1.7 5.9E-05 41.7 17.0 165 185-360 127-303 (358)
394 1hdg_O Holo-D-glyceraldehyde-3 94.7 0.13 4.5E-06 50.8 9.9 103 128-233 1-122 (332)
395 2d2i_A Glyceraldehyde 3-phosph 94.6 0.2 6.9E-06 50.4 11.3 92 127-218 2-110 (380)
396 1rm4_O Glyceraldehyde 3-phosph 94.6 0.2 6.8E-06 49.6 11.1 104 127-233 1-122 (337)
397 3dme_A Conserved exported prot 94.6 0.026 9E-07 55.2 4.8 36 125-162 2-37 (369)
398 1gad_O D-glyceraldehyde-3-phos 94.6 0.2 6.7E-06 49.6 11.0 105 127-235 1-121 (330)
399 3two_A Mannitol dehydrogenase; 94.6 0.076 2.6E-06 52.4 8.1 88 126-232 176-264 (348)
400 1y8q_A Ubiquitin-like 1 activa 94.5 0.2 6.8E-06 49.8 11.0 95 127-232 36-156 (346)
401 3pzr_A Aspartate-semialdehyde 94.5 0.17 5.7E-06 50.9 10.4 93 128-234 1-98 (370)
402 1xgk_A Nitrogen metabolite rep 94.5 0.033 1.1E-06 55.3 5.3 76 127-209 5-83 (352)
403 3b1j_A Glyceraldehyde 3-phosph 94.5 0.15 5E-06 50.6 9.8 92 127-218 2-110 (339)
404 2x5j_O E4PDH, D-erythrose-4-ph 94.4 0.21 7.1E-06 49.5 10.8 103 127-233 2-125 (339)
405 2dvm_A Malic enzyme, 439AA lon 94.4 0.028 9.7E-07 57.7 4.6 98 127-234 186-297 (439)
406 3cmc_O GAPDH, glyceraldehyde-3 94.4 0.085 2.9E-06 52.2 7.9 103 127-233 1-121 (334)
407 2zcu_A Uncharacterized oxidore 94.4 0.018 6.2E-07 54.6 2.9 71 129-208 1-74 (286)
408 3o38_A Short chain dehydrogena 94.4 0.17 5.8E-06 47.6 9.7 43 126-170 21-65 (266)
409 2c5a_A GDP-mannose-3', 5'-epim 94.4 0.012 4E-07 58.9 1.5 36 126-163 28-64 (379)
410 1sb8_A WBPP; epimerase, 4-epim 94.3 0.037 1.3E-06 54.4 5.1 36 125-162 25-61 (352)
411 3ip1_A Alcohol dehydrogenase, 94.3 0.26 8.9E-06 49.7 11.5 99 127-233 214-318 (404)
412 4hv4_A UDP-N-acetylmuramate--L 94.2 0.056 1.9E-06 56.4 6.5 71 124-209 19-93 (494)
413 2ywl_A Thioredoxin reductase r 94.2 0.041 1.4E-06 48.5 4.7 33 128-162 2-34 (180)
414 3c96_A Flavin-containing monoo 94.2 0.039 1.3E-06 55.6 5.0 37 124-162 1-38 (410)
415 3tfo_A Putative 3-oxoacyl-(acy 94.2 0.13 4.5E-06 48.8 8.5 44 125-170 2-46 (264)
416 4gx0_A TRKA domain protein; me 94.2 0.23 7.9E-06 52.4 11.2 43 127-171 127-169 (565)
417 1e3j_A NADP(H)-dependent ketos 94.2 0.34 1.2E-05 47.7 11.8 99 126-233 168-271 (352)
418 4id9_A Short-chain dehydrogena 94.1 0.026 8.9E-07 55.2 3.4 68 126-208 18-86 (347)
419 3rp8_A Flavoprotein monooxygen 94.1 0.046 1.6E-06 54.9 5.2 35 126-162 22-56 (407)
420 3fpf_A Mtnas, putative unchara 94.1 0.15 5.3E-06 49.5 8.7 97 126-232 122-221 (298)
421 3uw3_A Aspartate-semialdehyde 94.0 0.23 7.8E-06 50.0 10.1 94 127-234 4-102 (377)
422 2bi7_A UDP-galactopyranose mut 94.0 0.049 1.7E-06 54.8 5.2 35 126-162 2-36 (384)
423 2xdo_A TETX2 protein; tetracyc 94.0 0.051 1.7E-06 54.5 5.3 34 127-162 26-59 (398)
424 1y56_B Sarcosine oxidase; dehy 93.9 0.047 1.6E-06 54.1 4.9 34 127-162 5-38 (382)
425 1kyq_A Met8P, siroheme biosynt 93.9 0.065 2.2E-06 51.6 5.7 35 126-162 12-46 (274)
426 2ydy_A Methionine adenosyltran 93.9 0.055 1.9E-06 52.1 5.2 35 127-163 2-37 (315)
427 1yvv_A Amine oxidase, flavin-c 93.9 0.044 1.5E-06 53.1 4.5 34 127-162 2-35 (336)
428 3qj4_A Renalase; FAD/NAD(P)-bi 93.9 0.037 1.3E-06 54.2 4.0 34 127-162 1-37 (342)
429 1pl8_A Human sorbitol dehydrog 93.8 0.67 2.3E-05 45.7 13.2 92 126-233 171-273 (356)
430 3urh_A Dihydrolipoyl dehydroge 93.8 0.045 1.5E-06 56.7 4.7 49 110-161 9-57 (491)
431 4dgk_A Phytoene dehydrogenase; 93.8 0.045 1.5E-06 56.5 4.6 34 127-162 1-34 (501)
432 1pqw_A Polyketide synthase; ro 93.8 0.13 4.5E-06 46.1 7.2 45 126-172 38-83 (198)
433 2oln_A NIKD protein; flavoprot 93.7 0.046 1.6E-06 54.6 4.5 34 127-162 4-37 (397)
434 3oh8_A Nucleoside-diphosphate 93.7 0.029 1E-06 58.7 3.1 63 127-208 147-210 (516)
435 2gdz_A NAD+-dependent 15-hydro 93.6 0.29 1E-05 46.0 9.8 42 126-169 6-48 (267)
436 2d8a_A PH0655, probable L-thre 93.6 0.15 5.2E-06 50.2 8.0 93 126-233 167-267 (348)
437 1tt5_B Ubiquitin-activating en 93.6 0.071 2.4E-06 54.8 5.6 86 127-219 40-149 (434)
438 2o7s_A DHQ-SDH PR, bifunctiona 93.6 0.12 4.1E-06 54.3 7.5 43 127-171 364-406 (523)
439 3ihm_A Styrene monooxygenase A 93.6 0.058 2E-06 55.0 4.9 33 128-162 23-55 (430)
440 1p3d_A UDP-N-acetylmuramate--a 93.5 0.14 4.6E-06 53.1 7.7 68 124-206 15-84 (475)
441 1vm6_A DHPR, dihydrodipicolina 93.5 0.43 1.5E-05 44.5 10.1 121 127-305 12-135 (228)
442 1ebf_A Homoserine dehydrogenas 93.4 0.013 4.5E-07 58.7 -0.2 35 126-160 3-40 (358)
443 2vou_A 2,6-dihydroxypyridine h 93.4 0.07 2.4E-06 53.5 5.1 34 127-162 5-38 (397)
444 3nrn_A Uncharacterized protein 93.4 0.063 2.2E-06 54.1 4.8 33 128-162 1-33 (421)
445 2gf3_A MSOX, monomeric sarcosi 93.4 0.06 2.1E-06 53.3 4.6 34 127-162 3-36 (389)
446 1p0f_A NADP-dependent alcohol 93.3 0.48 1.7E-05 47.0 11.2 94 127-232 192-292 (373)
447 2zbw_A Thioredoxin reductase; 93.3 0.064 2.2E-06 51.9 4.6 35 126-162 4-38 (335)
448 3nix_A Flavoprotein/dehydrogen 93.3 0.057 2E-06 54.2 4.3 33 128-162 6-38 (421)
449 3uog_A Alcohol dehydrogenase; 93.2 0.28 9.4E-06 48.7 9.2 45 127-173 190-234 (363)
450 3alj_A 2-methyl-3-hydroxypyrid 93.2 0.073 2.5E-06 52.9 4.9 34 127-162 11-44 (379)
451 2bll_A Protein YFBG; decarboxy 93.2 0.05 1.7E-06 52.9 3.7 36 128-165 1-38 (345)
452 1e3i_A Alcohol dehydrogenase, 93.2 0.57 2E-05 46.5 11.5 94 127-232 196-296 (376)
453 1rjw_A ADH-HT, alcohol dehydro 93.1 0.3 1E-05 47.9 9.1 92 126-232 164-260 (339)
454 3hm2_A Precorrin-6Y C5,15-meth 93.1 0.78 2.7E-05 39.6 11.0 97 127-232 26-126 (178)
455 1orr_A CDP-tyvelose-2-epimeras 93.1 0.13 4.4E-06 50.0 6.4 33 127-161 1-34 (347)
456 1tt5_A APPBP1, amyloid protein 93.1 0.26 9E-06 51.8 9.1 35 127-162 32-66 (531)
457 2jhf_A Alcohol dehydrogenase E 93.0 0.62 2.1E-05 46.2 11.4 93 127-232 192-292 (374)
458 3ka7_A Oxidoreductase; structu 93.0 0.081 2.8E-06 53.1 4.9 33 128-162 1-33 (425)
459 3oz2_A Digeranylgeranylglycero 92.9 0.056 1.9E-06 53.2 3.6 33 128-162 5-37 (397)
460 3f1l_A Uncharacterized oxidore 92.9 0.59 2E-05 43.6 10.6 43 126-170 11-54 (252)
461 3cgv_A Geranylgeranyl reductas 92.9 0.061 2.1E-06 53.3 3.8 34 127-162 4-37 (397)
462 1y8q_B Anthracycline-, ubiquit 92.9 0.099 3.4E-06 56.1 5.6 35 127-162 17-51 (640)
463 1iy8_A Levodione reductase; ox 92.8 0.65 2.2E-05 43.6 10.8 41 127-169 13-54 (267)
464 2fk8_A Methoxy mycolic acid sy 92.8 0.79 2.7E-05 44.1 11.6 95 127-231 91-192 (318)
465 2fzw_A Alcohol dehydrogenase c 92.8 0.64 2.2E-05 46.0 11.2 94 127-232 191-291 (373)
466 3s2e_A Zinc-containing alcohol 92.8 0.23 8E-06 48.6 7.9 92 126-232 166-262 (340)
467 2yv3_A Aspartate-semialdehyde 92.8 0.069 2.4E-06 52.8 4.0 91 128-235 1-94 (331)
468 3qiv_A Short-chain dehydrogena 92.8 0.4 1.4E-05 44.5 9.1 42 127-170 9-51 (253)
469 3dje_A Fructosyl amine: oxygen 92.8 0.094 3.2E-06 53.1 5.0 34 127-162 6-40 (438)
470 1cdo_A Alcohol dehydrogenase; 92.7 0.43 1.5E-05 47.4 9.8 94 127-232 193-293 (374)
471 1ryi_A Glycine oxidase; flavop 92.7 0.085 2.9E-06 52.1 4.6 34 127-162 17-50 (382)
472 2qrj_A Saccharopine dehydrogen 92.7 0.041 1.4E-06 55.6 2.2 80 127-233 214-300 (394)
473 3lyl_A 3-oxoacyl-(acyl-carrier 92.7 0.5 1.7E-05 43.7 9.6 42 127-170 5-47 (247)
474 3awd_A GOX2181, putative polyo 92.7 0.47 1.6E-05 44.0 9.5 41 127-169 13-54 (260)
475 3d1c_A Flavin-containing putat 92.7 0.082 2.8E-06 51.9 4.3 34 127-162 4-38 (369)
476 1v3u_A Leukotriene B4 12- hydr 92.7 0.48 1.6E-05 46.2 9.9 44 127-172 146-190 (333)
477 3st7_A Capsular polysaccharide 92.6 0.094 3.2E-06 51.9 4.7 31 128-160 1-33 (369)
478 3i1j_A Oxidoreductase, short c 92.6 0.64 2.2E-05 42.9 10.3 43 126-170 13-56 (247)
479 1fmc_A 7 alpha-hydroxysteroid 92.6 0.36 1.2E-05 44.6 8.6 42 126-169 10-52 (255)
480 4a9w_A Monooxygenase; baeyer-v 92.6 0.075 2.6E-06 51.5 3.9 34 127-162 3-36 (357)
481 1wma_A Carbonyl reductase [NAD 92.6 0.35 1.2E-05 45.0 8.5 42 126-169 3-46 (276)
482 3c4a_A Probable tryptophan hyd 92.5 0.089 3.1E-06 52.4 4.5 34 128-163 1-36 (381)
483 3l6e_A Oxidoreductase, short-c 92.5 0.23 7.8E-06 46.0 7.0 43 126-170 2-45 (235)
484 2hcy_A Alcohol dehydrogenase 1 92.5 0.26 9E-06 48.4 7.8 94 126-232 169-268 (347)
485 2aqj_A Tryptophan halogenase, 92.5 0.11 3.7E-06 54.5 5.3 35 126-162 4-41 (538)
486 1cyd_A Carbonyl reductase; sho 92.5 0.25 8.4E-06 45.5 7.2 43 126-170 6-49 (244)
487 3fbs_A Oxidoreductase; structu 92.5 0.11 3.7E-06 49.0 4.8 34 127-162 2-35 (297)
488 2gqf_A Hypothetical protein HI 92.5 0.076 2.6E-06 53.8 3.9 37 125-163 2-38 (401)
489 1piw_A Hypothetical zinc-type 92.5 0.13 4.6E-06 50.9 5.7 91 126-232 179-275 (360)
490 2f00_A UDP-N-acetylmuramate--L 92.5 0.17 5.9E-06 52.6 6.7 66 126-206 18-85 (491)
491 3uko_A Alcohol dehydrogenase c 92.5 0.51 1.8E-05 46.9 10.0 94 127-232 194-294 (378)
492 3h8l_A NADH oxidase; membrane 92.5 0.1 3.5E-06 52.5 4.8 34 127-162 1-37 (409)
493 3v76_A Flavoprotein; structura 92.5 0.09 3.1E-06 53.6 4.4 36 126-163 26-61 (417)
494 3nks_A Protoporphyrinogen oxid 92.5 0.1 3.5E-06 53.3 4.9 34 127-162 2-37 (477)
495 2gv8_A Monooxygenase; FMO, FAD 92.4 0.12 4E-06 52.8 5.3 35 126-162 5-41 (447)
496 4b4u_A Bifunctional protein fo 92.4 0.28 9.4E-06 47.7 7.5 73 126-233 178-251 (303)
497 3itj_A Thioredoxin reductase 1 92.4 0.08 2.8E-06 51.0 3.8 35 126-162 21-55 (338)
498 1r0k_A 1-deoxy-D-xylulose 5-ph 92.4 1.1 3.9E-05 45.0 12.2 123 124-250 1-141 (388)
499 2g82_O GAPDH, glyceraldehyde-3 92.4 0.52 1.8E-05 46.5 9.6 101 128-233 1-119 (331)
500 2uzz_A N-methyl-L-tryptophan o 92.3 0.08 2.7E-06 52.1 3.8 33 128-162 3-35 (372)
No 1
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=100.00 E-value=1e-55 Score=449.12 Aligned_cols=328 Identities=34% Similarity=0.551 Sum_probs=311.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
+|||+|||+|+||+++|..|+++| ++|++|+|++++++.+++.|.+..|+++..++.++.+++|++++++++|+||++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G--~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVila 106 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG--QKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIV 106 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT--CCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEEC
Confidence 589999999999999999999999 999999999999999999998888999999999999999999989999999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCCH
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKDR 286 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~~d~ 286 (460)
||++.++++++++.++++++++||+++||+.+++ +.+++.+.+.++. .++.+++||+++.++..+.++.+++++.+.
T Consensus 107 Vp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~--~~~~vlsgP~~a~ev~~g~pt~~via~~~~ 183 (356)
T 3k96_A 107 VPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQ--VPMAVISGPSLATEVAANLPTAVSLASNNS 183 (356)
T ss_dssp CCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCS--CCEEEEESSCCHHHHHTTCCEEEEEEESCH
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCC--CCEEEEECccHHHHHHcCCCeEEEEecCCH
Confidence 9999999999999999999999999999999988 8899999988874 367899999999999999999888999999
Q ss_pred HHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 012596 287 KLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATITG 366 (460)
Q Consensus 287 ~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~~~~~ 366 (460)
+..++++++|+..+++++.++|+.+++|++++||++++++|+++++++++|...+++.++++|+.++++++|+++++|++
T Consensus 184 ~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t~~g 263 (356)
T 3k96_A 184 QFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTG 263 (356)
T ss_dssp HHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred HHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHhcCCCHHH
Q 012596 367 LSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKK 446 (460)
Q Consensus 367 ~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~~~~~~~~ 446 (460)
++|+||+++||+++.+|||++|..+++|++++++.+.+++++||+++++.++++|+++|+++|+.+++|+++.++.+|++
T Consensus 264 l~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~~v~~il~~~~~~~~ 343 (356)
T 3k96_A 264 LAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRILHEDLDPQQ 343 (356)
T ss_dssp TTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCCCHHH
T ss_pred cchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCCcHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCccC
Q 012596 447 AVLELMSLPQVEE 459 (460)
Q Consensus 447 ~~~~l~~~~~~~~ 459 (460)
+++.|++||.+.|
T Consensus 344 ~~~~l~~r~~~~e 356 (356)
T 3k96_A 344 AVQELLERSPKAE 356 (356)
T ss_dssp HHHHHHSCC----
T ss_pred HHHHHHcCCCCCC
Confidence 9999999999987
No 2
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-52 Score=423.44 Aligned_cols=330 Identities=28% Similarity=0.386 Sum_probs=295.3
Q ss_pred cCCCeEEEECcchHHHHHHHHHHhcCCC------CeEEEEeCCHH-----HHHHHHhhcCCCccCCCCCCCCceEEeCCH
Q 012596 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQ------LKVYMLMRDPA-----VCQSINEKHCNCRYFPEQKLPENVIATTDA 193 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~~A~~La~~G~~------~~V~v~~r~~~-----~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~ 193 (460)
++..||+|||+|+||+++|..|+++|++ ++|++|.|+++ ..+.+++.+.|.+|+|++.+|+++.+++|+
T Consensus 32 ~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl 111 (391)
T 4fgw_A 32 EKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDL 111 (391)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCH
T ss_pred CCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCH
Confidence 3457999999999999999999998721 25999999865 477888889999999999999999999999
Q ss_pred HhhcCCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchh--hhHHHHHHHHhCCCCCCEEEEECcccHHHH
Q 012596 194 KTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL--RMMSQIIPQALRNPRQPFIALSGPSFALEL 271 (460)
Q Consensus 194 ~ea~~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~--~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~ 271 (460)
.++++++|+||++||++.++++++++.++++++.++|+++||+++++. +.+++.+.+.++. ++++++||+++.|+
T Consensus 112 ~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~---~~~vLsGPs~A~EV 188 (391)
T 4fgw_A 112 IDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGI---QCGALSGANIATEV 188 (391)
T ss_dssp HHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCC---EEEEEECSCCHHHH
T ss_pred HHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhCc---cceeccCCchHHHh
Confidence 999999999999999999999999999999999999999999987653 5789999988774 57899999999999
Q ss_pred hccCCeEEEEccCCHH---------HHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHH
Q 012596 272 MNKLPTAMVVASKDRK---------LANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAAL 342 (460)
Q Consensus 272 ~~g~~~~i~i~~~d~~---------~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al 342 (460)
+.+.++.+++++.+.+ ..+.++++|....|+++.++|+.|+|+++++||++|+++|+++|+++|+|...++
T Consensus 189 a~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAaGi~dGlg~G~NakAAL 268 (391)
T 4fgw_A 189 AQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAI 268 (391)
T ss_dssp HTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHHHHHhcCCCCCCHHHHH
Confidence 9999999988865432 3577999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc---CCCccccccccCCCceeeecccCCCccchHHHHhh-CCCChHHHHhhc--ccceehhhhHHH
Q 012596 343 VAQGCSEIRWLATKM---GAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLG-SGEKLDDILSSM--NQVAEGVSTAGA 416 (460)
Q Consensus 343 ~~~~~~E~~~la~a~---Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~-~g~~~e~~~~~~--~~~~eg~kd~g~ 416 (460)
+.++++||.+|++++ |.++.+|.+++|+||+++||++ +|||++|..++ +|++.+++.+.+ ++++||.+.++.
T Consensus 269 itrGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~Tc~s--SRNr~~G~~lg~~G~~~~~~~~~~~~g~v~EGv~ta~~ 346 (391)
T 4fgw_A 269 QRVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAG--GRNVKVARLMATSGKDAWECEKELLNGQSAQGLITCKE 346 (391)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHHHHHS--SHHHHHHHHHHHTCCCHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCceeecCCCcccceeEEecC--CccHHHHHHHHhcCCCHHHHHHHHhCCCEEehHHHHHH
Confidence 999999999999998 5556667789999999999998 99999999998 599998888877 789999999999
Q ss_pred HHHHHHHcCC--CChHHHHHHHHHhcCCCHHHHHHHHhcCCCccC
Q 012596 417 VIALAQKYNV--KMPVLTAVARIIDNELTPKKAVLELMSLPQVEE 459 (460)
Q Consensus 417 vv~lA~~~gv--~~P~~~~v~~ll~~~~~~~~~~~~l~~~~~~~~ 459 (460)
++++++++|+ +||+.+++|++|+++.+|+++.+.++.++..+|
T Consensus 347 v~~l~~~~~v~~emPI~~~vy~IL~~~~~~~~~~~~l~~~~~~eE 391 (391)
T 4fgw_A 347 VHEWLETCGSVEDFPLFEAVYQIVYNNYPMKNLPDMIEELDLHED 391 (391)
T ss_dssp HHHHHHHHTCSTTCHHHHHHHHHHHSCCCSTTHHHHHCC------
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHhCCCCHHHHHHHHHhcccCCC
Confidence 9999999999 899999999999999999999999999888876
No 3
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=100.00 E-value=2.2e-45 Score=374.42 Aligned_cols=343 Identities=35% Similarity=0.545 Sum_probs=295.7
Q ss_pred eeeeccccchhccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCC
Q 012596 113 RTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD 192 (460)
Q Consensus 113 ~~~~~~~~~~~~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~ 192 (460)
++|++....+.| +||||+|||+|+||++||..|+++| ++|++|+|++++++.+++.+.+..++++..++.++.++++
T Consensus 2 ~~~~~~~~~~~m-~M~kI~iIG~G~mG~~la~~L~~~G--~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (366)
T 1evy_A 2 STKQHSAKDELL-YLNKAVVFGSGAFGTALAMVLSKKC--REVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSD 78 (366)
T ss_dssp -------CCCCC-CEEEEEEECCSHHHHHHHHHHTTTE--EEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESC
T ss_pred ccchhhhhhHhh-ccCeEEEECCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCC
Confidence 456653333443 4459999999999999999999999 9999999999999999988777677777666767888889
Q ss_pred HHhhcCCCcEEEEccchhcHHHHHHH----hhhcCCC-CCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECccc
Q 012596 193 AKTALLGADYCLHAMPVQFSSSFLEG----ISDYVDP-GLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSF 267 (460)
Q Consensus 193 ~~ea~~~aDiVilaVp~~~~~~vl~~----i~~~l~~-~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~ 267 (460)
+.++++++|+||+|||++++.+++++ +.+.+++ +++||+++||+.+++.+.+.+.+.+.+|. .++.++.||.+
T Consensus 79 ~~~~~~~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~--~~~~v~~gp~~ 156 (366)
T 1evy_A 79 VEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPS--PLLSVLAGPSF 156 (366)
T ss_dssp HHHHHTTCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCG--GGEEEEESSCC
T ss_pred HHHHHcCCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCC--CcEEEEeCCCh
Confidence 98888999999999999999999998 9888888 89999999999987666777777765553 24678999999
Q ss_pred HHHHhccCCeEEEEccCCHHHHHHHHHHHhcC--CceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHH
Q 012596 268 ALELMNKLPTAMVVASKDRKLANAVQQLLASK--HLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQ 345 (460)
Q Consensus 268 a~e~~~g~~~~i~i~~~d~~~~~~l~~lL~~~--g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~ 345 (460)
+.++..+.++.+.+++.+.+..++++++|+.. +++++.++|+.+.+|+++++|++++++|+..++++++|...+++..
T Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~ 236 (366)
T 1evy_A 157 AIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMR 236 (366)
T ss_dssp HHHHHTTCCEEEEEECSSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHhCCceEEEEecCCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHH
Confidence 99887887777777888889999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcC
Q 012596 346 GCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYN 425 (460)
Q Consensus 346 ~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~g 425 (460)
+++|+..++++.|++++++.++.+.++.+.++.+..++++++++++.+|++.+++.+++++..|+.+|+++++++|+++|
T Consensus 237 ~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~v~~~a~~~g 316 (366)
T 1evy_A 237 GLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATADPLMRLAKQLK 316 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHTTCCHHHHHC---CCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHhCCCCHHHHHHHcCCeeehHHHHHHHHHHHHHhC
Confidence 99999999999999998888776777777677777778888899999999888887777788999999999999999999
Q ss_pred CCChHHHHHHHHHhcCCCHHHHHHHHhcCCCccCC
Q 012596 426 VKMPVLTAVARIIDNELTPKKAVLELMSLPQVEEV 460 (460)
Q Consensus 426 v~~P~~~~v~~ll~~~~~~~~~~~~l~~~~~~~~~ 460 (460)
+++|+++.+|++++.+.+|+++++.|++||.+.|+
T Consensus 317 v~~P~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~ 351 (366)
T 1evy_A 317 VKMPLCHQIYEIVYKKKNPRDALADLLSCGLQDEG 351 (366)
T ss_dssp CCCHHHHHHHHHHHSCCCHHHHHHHHGGGCSCCCC
T ss_pred CCCcHHHHHHHHHHCCCCHHHHHHHHHcCCccccc
Confidence 99999999999999999999999999999998873
No 4
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=100.00 E-value=8.5e-44 Score=358.70 Aligned_cols=318 Identities=36% Similarity=0.524 Sum_probs=279.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.|||+|||+|+||++||..|+++| ++|++|+|++++++.+++.|.+. |+++..+ ++.+++++++ ++++|+||+|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G--~~V~~~~r~~~~~~~l~~~g~~~-~~~~~~~--~~~~~~~~~~-~~~aDvVil~ 87 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG--EEVILWARRKEIVDLINVSHTSP-YVEESKI--TVRATNDLEE-IKKEDILVIA 87 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHSCBT-TBTTCCC--CSEEESCGGG-CCTTEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCCcc-cCCCCee--eEEEeCCHHH-hcCCCEEEEE
Confidence 589999999999999999999999 99999999999999999988665 6666554 5677888888 8899999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCCH
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKDR 286 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~~d~ 286 (460)
||+++++++++++.+ +++++|+++||+.+++.+.+++.+.+.++ ....++.||+++.++..|.++.+.+++.+
T Consensus 88 vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~---~~~~~~~~P~~~~~~~~g~~~~~~~g~~~- 160 (335)
T 1z82_A 88 IPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG---CPYAVLSGPSHAEEVAKKLPTAVTLAGEN- 160 (335)
T ss_dssp SCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC---CCEEEEESSCCHHHHHTTCCEEEEEEETT-
T ss_pred CCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC---CceEEEECCccHHHHhCCCceEEEEEehh-
Confidence 999999999988876 68999999999998776778888877654 35788999999998888877666677655
Q ss_pred HHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 012596 287 KLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATITG 366 (460)
Q Consensus 287 ~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~~~~~ 366 (460)
.+.++++|+..+++++.++|+.+.+|+|+++|++++++|+..++++++|...+++..++.|+..++++.|++++++.+
T Consensus 161 --~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~ 238 (335)
T 1z82_A 161 --SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMG 238 (335)
T ss_dssp --HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred --HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcc
Confidence 789999999999999999999999999999999999999999999999998999999999999999999999988888
Q ss_pred ccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHhcCCCHHH
Q 012596 367 LSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKK 446 (460)
Q Consensus 367 ~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~~~~~~~~ 446 (460)
+.++++.+.++.+..++|+++++++.+|++.+++.+..+++.|+.+++++++++|+++|+++|++++++++++.+.++++
T Consensus 239 l~~~~~~~~t~~s~~~~n~~~~~~~~~g~~~~~~~~~~g~~~e~~~~~~~v~~~a~~~gv~~P~~~~v~~~~~~~~~~~~ 318 (335)
T 1z82_A 239 LAGIGDLMVTCNSRYSRNRRFGELIARGFNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKPPLQ 318 (335)
T ss_dssp TTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHTCSSCCTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCCCHHH
T ss_pred cccccceeeeccCccCcHHHHHHHHhCCCCHHHHHHhcCCeeeHHHHHHHHHHHHHHhCCCCcHHHHHHHHHhCCCCHHH
Confidence 77777777777777788888888888888888887777889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCccC
Q 012596 447 AVLELMSLPQVEE 459 (460)
Q Consensus 447 ~~~~l~~~~~~~~ 459 (460)
+++.|++||.+.|
T Consensus 319 ~~~~l~~~~~~~~ 331 (335)
T 1z82_A 319 SMRDLMRRSLKDE 331 (335)
T ss_dssp HHHHHHC------
T ss_pred HHHHHHcCCcccc
Confidence 9999999999887
No 5
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=100.00 E-value=9.5e-44 Score=363.78 Aligned_cols=326 Identities=24% Similarity=0.388 Sum_probs=293.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcC-----CCCeEEEEeCCHH-----HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKK-----SQLKVYMLMRDPA-----VCQSINEKHCNCRYFPEQKLPENVIATTDAKTA 196 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G-----~~~~V~v~~r~~~-----~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (460)
||||+|||+|+||++||..|+++| ++++|++|+|+++ +++.+++.+.+..|+++..++.++.++++++++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 479999999999999999999886 1268999999998 899998888777788887777788888899888
Q ss_pred cCCCcEEEEccchhcHHHHHHHhhh----cCCCCCeEEEeccCCcc--chhhhHHHHHHHHhCCCCCCEEEEECcccHHH
Q 012596 197 LLGADYCLHAMPVQFSSSFLEGISD----YVDPGLPFISLSKGLEL--NTLRMMSQIIPQALRNPRQPFIALSGPSFALE 270 (460)
Q Consensus 197 ~~~aDiVilaVp~~~~~~vl~~i~~----~l~~~~iIV~~~~Gi~~--~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e 270 (460)
++++|+||+|||+++++++++++.+ .+++++++|+++||+.+ ++.+.+++.+.+.++ .++.++.||.++.+
T Consensus 101 ~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~ 177 (375)
T 1yj8_A 101 INDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN---IPCSALSGANIAMD 177 (375)
T ss_dssp HTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSS---SCEEEEECSCCHHH
T ss_pred HcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcC---CCEEEEeCCchHHH
Confidence 8999999999999999999999998 89999999999999988 344577788877665 35778999999998
Q ss_pred HhccCCeEEEEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHH
Q 012596 271 LMNKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEI 350 (460)
Q Consensus 271 ~~~g~~~~i~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~ 350 (460)
+..+.++.+.+++.+.+..++++++|+..+++++.++|+.+.+|+|+++|++++++|+..++++++|...+++..+++|+
T Consensus 178 v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~ 257 (375)
T 1yj8_A 178 VAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRNGINEM 257 (375)
T ss_dssp HHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Confidence 88888877778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc--CCCccccccccCCCceeeecccCCCccchHHHHhhC-C--CChHHHHhhc--ccceehhhhHHHHHHHHHH
Q 012596 351 RWLATKM--GAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGS-G--EKLDDILSSM--NQVAEGVSTAGAVIALAQK 423 (460)
Q Consensus 351 ~~la~a~--Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~-g--~~~e~~~~~~--~~~~eg~kd~g~vv~lA~~ 423 (460)
.+++++. |++++++.++++++|++.+|.+ +++++++..+.+ | ++.+++.+.+ ++..|+.+++++++++|++
T Consensus 258 ~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~--~~~~~~~~~~~~~g~~~~~~d~~~~~~~g~~~E~~~~~~~v~~~a~~ 335 (375)
T 1yj8_A 258 ILFGKVFFQKFNENILLESCGFADIITSFLA--GRNAKCSAEFIKSTPKKTWEELENEILKGQKLQGTVTLKYVYHMIKE 335 (375)
T ss_dssp HHHHHHHSSCCCGGGGGSTTTHHHHHHHHSS--SSHHHHHHHHHHHTTSSCHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCcchhhccccccceeEeeeC--CccHHHHHHHHhcCCCCCHHHHHHhhcCCcEeeHHHHHHHHHHHHHH
Confidence 9999999 6999999998899999888887 688888888877 7 6778887756 8899999999999999999
Q ss_pred cCC--CChHHHHHHHHHhcCCCHHHHHHHHhcCCCc
Q 012596 424 YNV--KMPVLTAVARIIDNELTPKKAVLELMSLPQV 457 (460)
Q Consensus 424 ~gv--~~P~~~~v~~ll~~~~~~~~~~~~l~~~~~~ 457 (460)
+|+ ++|+++++|++++++.+|+++++.|++||..
T Consensus 336 ~gv~~~~P~~~~v~~~~~~~~~~~~~~~~l~~~~~~ 371 (375)
T 1yj8_A 336 KNMTNEFPLFTVLHKISFENEDPSSLLKTFMNNKIN 371 (375)
T ss_dssp TTCGGGCHHHHHHHHHHHSCCCTTHHHHHHSSCCCC
T ss_pred hCCCCCCCHHHHHHHHHhCCCCHHHHHHHHHcCcHh
Confidence 999 9999999999999999999999999999864
No 6
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=100.00 E-value=9.7e-43 Score=352.83 Aligned_cols=326 Identities=28% Similarity=0.462 Sum_probs=288.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCC-----CCeEEEEeCCHH-----HHHHHHhhcCCCccCCCCCCCCceEEeCCHHh
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKS-----QLKVYMLMRDPA-----VCQSINEKHCNCRYFPEQKLPENVIATTDAKT 195 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~-----~~~V~v~~r~~~-----~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~e 195 (460)
.+|||+|||+|+||++||..|+++|. +++|++|+|+++ +.+.+++.+.+..++++..++.++.+++++++
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQ 86 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHH
Confidence 35799999999999999999998861 168999999998 88889887776667666666667888889988
Q ss_pred hcCCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCcc--chhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhc
Q 012596 196 ALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL--NTLRMMSQIIPQALRNPRQPFIALSGPSFALELMN 273 (460)
Q Consensus 196 a~~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~--~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~ 273 (460)
+++++|+||+|||++.++++++++.+.++++++||+++||+.. ++.+.+.+.+.+.+| .+..++.||.++.++..
T Consensus 87 ~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~ 163 (354)
T 1x0v_A 87 AAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG---IPMSVLMGANIASEVAD 163 (354)
T ss_dssp HHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT---CCEEEEECSCCHHHHHT
T ss_pred HHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcC---CCEEEEECCCcHHHHHh
Confidence 8899999999999999999999999999999999999999984 444567777777665 35779999999998888
Q ss_pred cCCeEEEEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHH
Q 012596 274 KLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWL 353 (460)
Q Consensus 274 g~~~~i~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~l 353 (460)
+.++.+.+++.+.+..++++++|+..+++++.++|+.+.+|+|+++|++++++|+..++++++|...+++..+++|+.++
T Consensus 164 g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~~~~~E~~~l 243 (354)
T 1x0v_A 164 EKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAF 243 (354)
T ss_dssp TCCEEEEEECSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHH
Confidence 87777778888889999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred HHHcCC---CccccccccCCCceeeecccCCCccchHHHHhhC-CCChHHHHhhc--ccceehhhhHHHHHHHHHHcCC-
Q 012596 354 ATKMGA---KPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGS-GEKLDDILSSM--NQVAEGVSTAGAVIALAQKYNV- 426 (460)
Q Consensus 354 a~a~Gi---~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~-g~~~e~~~~~~--~~~~eg~kd~g~vv~lA~~~gv- 426 (460)
|++.|+ +++++.++++++|++.+|.+ +++++++.++.+ |++.+++.+.+ ++..|+.+++++++++|+++|+
T Consensus 244 a~a~G~~~~~~~~~~~~~g~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~g~v~~~a~~~gv~ 321 (354)
T 1x0v_A 244 AKLFCSGPVSSATFLESCGVADLITTCYG--GRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLV 321 (354)
T ss_dssp HHHHSSSCCCGGGGGSTTTHHHHHHHHHH--CHHHHHHHHHHHHCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHTCG
T ss_pred HHHhcCCCCCcccccccchHHHHHHhhcc--cccHHHHHHHHhcCCCHHHHHHhhcCCcEeehHHHHHHHHHHHHHhCCC
Confidence 999999 89999888888888887776 678888888876 78887777654 7899999999999999999999
Q ss_pred -CChHHHHHHHHHhcCCCHHHHHHHHhcCCC
Q 012596 427 -KMPVLTAVARIIDNELTPKKAVLELMSLPQ 456 (460)
Q Consensus 427 -~~P~~~~v~~ll~~~~~~~~~~~~l~~~~~ 456 (460)
++|+++++|++++.+.+|+++++.|++||.
T Consensus 322 ~~~P~~~~v~~~~~~~~~~~~~~~~l~~~~~ 352 (354)
T 1x0v_A 322 DKFPLFMAVYKVCYEGQPVGEFIHCLQNHPE 352 (354)
T ss_dssp GGSHHHHHHHHHHHSCCCGGGTHHHHHTCCS
T ss_pred CCCCHHHHHHHHHhCCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999974
No 7
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=100.00 E-value=3.4e-38 Score=316.56 Aligned_cols=318 Identities=25% Similarity=0.362 Sum_probs=266.3
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHhhcCCCccCCCCCCCCceEEeC--CHHhhcCCCcEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEKHCNCRYFPEQKLPENVIATT--DAKTALLGADYC 203 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r--~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~--~~~ea~~~aDiV 203 (460)
|||+|||+|+||+++|..|+++| ++|++|+| ++++++.+++.|.+..+ +..+ .++.+++ ++.++++++|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~--g~~~-~~~~~~~~~~~~~~~~~~D~v 75 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG--NEVRIWGTEFDTEILKSISAGREHPRL--GVKL-NGVEIFWPEQLEKCLENAEVV 75 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC--CEEEEECCGGGHHHHHHHHTTCCBTTT--TBCC-CSEEEECGGGHHHHHTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CeEEEEEccCCHHHHHHHHHhCcCccc--Cccc-cceEEecHHhHHHHHhcCCEE
Confidence 68999999999999999999999 99999999 99899999887654333 2222 3456666 777878999999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccCC---ccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEE
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL---ELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi---~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~ 280 (460)
|+|||++++.++++++.+ ++++++||+++||+ .+++.+.+.+.+.+.+|.. ....+..||.++.+...+.++.++
T Consensus 76 i~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~-~~~~~~~~p~~~~~~~~g~~~~~~ 153 (335)
T 1txg_A 76 LLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLR-ERTVAITGPAIAREVAKRMPTTVV 153 (335)
T ss_dssp EECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCG-GGEEEEESSCCHHHHHTTCCEEEE
T ss_pred EEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCC-CcEEEEECCCcHHHHHccCCcEEE
Confidence 999999999999999999 98899999999999 6555556666665533431 246789999999887777766677
Q ss_pred EccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCC-----CcHHHHHHHHHHHHHHHHHH
Q 012596 281 VASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG-----NNSMAALVAQGCSEIRWLAT 355 (460)
Q Consensus 281 i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~-----~n~~~al~~~~~~E~~~la~ 355 (460)
+++.+.+..+.++++|+..|++++..+|+.+.+|.|+++|++.+++|+..+++++ +|....++..+++|+..+++
T Consensus 154 ~~~~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la~ 233 (335)
T 1txg_A 154 FSSPSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIE 233 (335)
T ss_dssp EECSCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8887888999999999999999999999999999999999999998988888888 88888999999999999999
Q ss_pred HcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcc----cceehhhhHHHHHHHHHHcCCCChHH
Q 012596 356 KMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMN----QVAEGVSTAGAVIALAQKYNVKMPVL 431 (460)
Q Consensus 356 a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~----~~~eg~kd~g~vv~lA~~~gv~~P~~ 431 (460)
++|++++++.++.++++.+.++.+ ++++.++.++..|++.......++ +..|+.+++++++++|+++|+++|++
T Consensus 234 ~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~d~~~~~~~~~~~~E~~~~~~~~~~~a~~~gv~~P~~ 311 (335)
T 1txg_A 234 ILGGDRETAFGLSGFGDLIATFRG--GRNGMLGELLGKGLSIDEAMEELERRGVGVVEGYKTAEKAYRLSSKINADTKLL 311 (335)
T ss_dssp HHTSCGGGGGSTTTHHHHHHTTTC--HHHHHHHHHHHTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred HHCCCcchhhcccchhheeecccc--CccHHHHHHHhCCCCHHHHHHHhccCCceecchHHHHHHHHHHHHHcCCCCcHH
Confidence 999999888776666666655554 566667777777777653333334 67899999999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHhcC
Q 012596 432 TAVARIIDNELTPKKAVLELMSL 454 (460)
Q Consensus 432 ~~v~~ll~~~~~~~~~~~~l~~~ 454 (460)
+.+|++++.+.+|.++++.|++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~ 334 (335)
T 1txg_A 312 DSIYRVLYEGLKVEEVLFELATF 334 (335)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCHHHHHHHHHcC
Confidence 99999999999999999999864
No 8
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=100.00 E-value=3.3e-33 Score=279.68 Aligned_cols=291 Identities=15% Similarity=0.192 Sum_probs=219.0
Q ss_pred chhccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCC
Q 012596 121 TDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (460)
Q Consensus 121 ~~~~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~a 200 (460)
.+.+..+|||+|||+|+||+++|..|+++| ++|++| +++++++.+++.|.+.. .++..++.++.+++++++ ++++
T Consensus 13 ~~~~~~~~kI~IiGaGa~G~~~a~~L~~~G--~~V~l~-~~~~~~~~i~~~g~~~~-~~~~~~~~~~~~~~~~~~-~~~~ 87 (318)
T 3hwr_A 13 ENLYFQGMKVAIMGAGAVGCYYGGMLARAG--HEVILI-ARPQHVQAIEATGLRLE-TQSFDEQVKVSASSDPSA-VQGA 87 (318)
T ss_dssp -------CEEEEESCSHHHHHHHHHHHHTT--CEEEEE-CCHHHHHHHHHHCEEEE-CSSCEEEECCEEESCGGG-GTTC
T ss_pred hhhhccCCcEEEECcCHHHHHHHHHHHHCC--CeEEEE-EcHhHHHHHHhCCeEEE-cCCCcEEEeeeeeCCHHH-cCCC
Confidence 345556799999999999999999999999 999999 99999999998886544 234445556677778765 5899
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHH-HHHhCCCCCCEEEEECcccHHHHhccCCeEE
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQII-PQALRNPRQPFIALSGPSFALELMNKLPTAM 279 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l-~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i 279 (460)
|+||+|||+++++++++++.++++++++||+++||++.+. .+.+.+ .+.++......+++.||+++.+...|. +
T Consensus 88 D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~--~l~~~~~~~vl~g~~~~~a~~~gP~~~~~~~~g~---~ 162 (318)
T 3hwr_A 88 DLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENAD--TLRSLLEQEVAAAVVYVATEMAGPGHVRHHGRGE---L 162 (318)
T ss_dssp SEEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHH--HHHHHCCSEEEEEEEEEEEEEEETTEEEEEEEEE---E
T ss_pred CEEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHH--HHHHHcCCcEEEEEEEEeEEEcCCeEEEEcCCce---E
Confidence 9999999999999999999999999999999999998752 333333 122211111235678999888765553 3
Q ss_pred EEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCC----CcHHHHHHHHHHHHHHHHHH
Q 012596 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG----NNSMAALVAQGCSEIRWLAT 355 (460)
Q Consensus 280 ~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~----~n~~~al~~~~~~E~~~la~ 355 (460)
.++. .+..+.++++|+..+++++.++|+.+.+|.|+++|+..++.+...+..++ +.....++..++.|+.++++
T Consensus 163 ~ig~--~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~ 240 (318)
T 3hwr_A 163 VIEP--TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVAR 240 (318)
T ss_dssp EECC--CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHH
T ss_pred EEcC--CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHH
Confidence 4665 34568899999999999999999999999999999988887877776654 33467899999999999999
Q ss_pred HcCCCccc-cccccCCCceeeecccCCCccc-hHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHH
Q 012596 356 KMGAKPAT-ITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTA 433 (460)
Q Consensus 356 a~Gi~~~~-~~~~~~~gd~~~t~~s~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~ 433 (460)
+.|++++. +.+. .+..+... ..++ +|.+|+.+|+++| ....+|+++++|+++|+++|++++
T Consensus 241 a~G~~l~~~~~~~-----~~~~~~~~-~~~~sSM~qD~~~gr~tE-----------id~i~G~vv~~a~~~gv~tP~~~~ 303 (318)
T 3hwr_A 241 AEGVKLPDDVALA-----IRRIAETM-PRQSSSTAQDLARGKRSE-----------IDHLNGLIVRRGDALGIPVPANRV 303 (318)
T ss_dssp HTTCCCCTTHHHH-----HHHHHHHS-TTCCCHHHHHHHTTCCCS-----------GGGTHHHHHHHHHHTTCCCHHHHH
T ss_pred HcCCCCChHHHHH-----HHHHHHhc-CCCCcHHHHHHHcCChhH-----------HHHHHHHHHHHHHHhCCCCcHHHH
Confidence 99998532 1110 00001111 1232 5678888877664 346789999999999999999999
Q ss_pred HHHHHhc
Q 012596 434 VARIIDN 440 (460)
Q Consensus 434 v~~ll~~ 440 (460)
+|++++.
T Consensus 304 l~~ll~~ 310 (318)
T 3hwr_A 304 LHALVRL 310 (318)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 9
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=100.00 E-value=3.6e-33 Score=278.55 Aligned_cols=283 Identities=15% Similarity=0.184 Sum_probs=213.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccC-CCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYF-PEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~-~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+|||+|||+|+||+++|..|+++| ++|++|+|++ .+.+++.|.+..+. ++..++ .+.+++++++ ++.+|+||+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~-~~~~~~~~~~-~~~~D~vil 75 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSG--EDVHFLLRRD--YEAIAGNGLKVFSINGDFTLP-HVKGYRAPEE-IGPMDLVLV 75 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTS--CCEEEECSTT--HHHHHHTCEEEEETTCCEEES-CCCEESCHHH-HCCCSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEe-eceeecCHHH-cCCCCEEEE
Confidence 479999999999999999999999 8999999986 47888877654432 222232 3456677766 589999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCC------CEEEEECcccHHHHhccCCeEE
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQ------PFIALSGPSFALELMNKLPTAM 279 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~------~~~v~~gP~~a~e~~~g~~~~i 279 (460)
|||+++++++++.+.+++.++++||+++||+++. +.+.+.++...+ ..+.+.||+++.+... ..+
T Consensus 76 avk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~------~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~---g~~ 146 (312)
T 3hn2_A 76 GLKTFANSRYEELIRPLVEEGTQILTLQNGLGNE------EALATLFGAERIIGGVAFLCSNRGEPGEVHHLGA---GRI 146 (312)
T ss_dssp CCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHH------HHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEE---EEE
T ss_pred ecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcH------HHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCC---CeE
Confidence 9999999999999999999999999999999864 234444443111 1123456777664332 344
Q ss_pred EEcc---CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCC----CcHHHHHHHHHHHHHHH
Q 012596 280 VVAS---KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG----NNSMAALVAQGCSEIRW 352 (460)
Q Consensus 280 ~i~~---~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~----~n~~~al~~~~~~E~~~ 352 (460)
.++. .+.+..+.+.++|+..+++++.++|+.+.+|.|+++|+..++.+...+..+| ++....++.+++.|+.+
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~ 226 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIA 226 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHH
Confidence 5653 3467789999999999999999999999999999999987777766666544 56778999999999999
Q ss_pred HHHHcC--CCcc-ccccccCCCceeeecccCCCccc-hHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCC
Q 012596 353 LATKMG--AKPA-TITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKM 428 (460)
Q Consensus 353 la~a~G--i~~~-~~~~~~~~gd~~~t~~s~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~ 428 (460)
+++++| ++.+ .+. +.+..+....++++ +|.+|+.+|+++| .+..+|+++++|+++|+++
T Consensus 227 va~a~G~~~~~~~~~~------~~~~~~~~~~~~~~sSM~qD~~~gr~tE-----------id~i~G~vv~~a~~~gv~~ 289 (312)
T 3hn2_A 227 GANAQGLATFIADGYV------DDMLEFTDAMGEYKPSMEIDREEGRPLE-----------IAAIFRTPLAYGAREGIAM 289 (312)
T ss_dssp HHHTSCCSSCCCTTHH------HHHHHHHTTSCSCCCHHHHHHHTTCCCC-----------HHHHTHHHHHHHHHTTCCC
T ss_pred HHHHcCCccCCCHHHH------HHHHHHHhcCCCCCchHHHHHHhCCCcc-----------HHHHhhHHHHHHHHhCCCC
Confidence 999999 7743 221 22222222223444 5678888777654 4467899999999999999
Q ss_pred hHHHHHHHHHhcC
Q 012596 429 PVLTAVARIIDNE 441 (460)
Q Consensus 429 P~~~~v~~ll~~~ 441 (460)
|+++++|++++..
T Consensus 290 P~~~~l~~ll~~~ 302 (312)
T 3hn2_A 290 PRVEMLATLLEQA 302 (312)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999999753
No 10
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=100.00 E-value=6.5e-33 Score=277.61 Aligned_cols=281 Identities=15% Similarity=0.197 Sum_probs=209.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCc--cCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCR--YFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~--~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
+|||+|||+|+||+++|..|+++| ++|++|+|++ .+.+++.|.... +.++..++ .+.++++++++.+++|+||
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~-~~~~~~~~~~~~~~~DlVi 76 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTG--HCVSVVSRSD--YETVKAKGIRIRSATLGDYTFR-PAAVVRSAAELETKPDCTL 76 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTT--CEEEEECSTT--HHHHHHHCEEEEETTTCCEEEC-CSCEESCGGGCSSCCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC--CeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEe-eeeeECCHHHcCCCCCEEE
Confidence 389999999999999999999999 9999999987 378888775332 34444443 3556778877666899999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccH-------HHHhccCCe
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFA-------LELMNKLPT 277 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a-------~e~~~g~~~ 277 (460)
+|||++++.++++.+.++++++++||+++||+++. +.+.+.++.. .++.|+.+. .++..+.+.
T Consensus 77 lavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~------~~l~~~~~~~----~vl~g~~~~~a~~~~pg~v~~~~~~ 146 (320)
T 3i83_A 77 LCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIE------PEVAAAFPDN----EVISGLAFIGVTRTAPGEIWHQAYG 146 (320)
T ss_dssp ECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCS------HHHHHHSTTS----CEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChH------HHHHHHCCCC----cEEEEEEEeceEEcCCCEEEECCCC
Confidence 99999999999999999999999999999999875 3456666542 234444433 222222334
Q ss_pred EEEEc---cCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCC----CcHHHHHHHHHHHHH
Q 012596 278 AMVVA---SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG----NNSMAALVAQGCSEI 350 (460)
Q Consensus 278 ~i~i~---~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~----~n~~~al~~~~~~E~ 350 (460)
.+.++ +.+.+..+.+.++|+..+++++.++|+.+.+|.|+++|+..+..++..+...+ ++. ..++.+++.|+
T Consensus 147 ~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~-~~l~~~~~~E~ 225 (320)
T 3i83_A 147 RLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQ-EGFVRAIMQEI 225 (320)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHC-HHHHHHHHHHH
T ss_pred EEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcH-HHHHHHHHHHH
Confidence 55665 34567889999999999999999999999999999999765444444443332 334 78999999999
Q ss_pred HHHHHHcCCCccc-cccccCCCceeeecccCCCccc-hHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCC
Q 012596 351 RWLATKMGAKPAT-ITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKM 428 (460)
Q Consensus 351 ~~la~a~Gi~~~~-~~~~~~~gd~~~t~~s~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~ 428 (460)
.++++++|++.+. +. +.+..+....+.++ +|.+|+.+|+++| .+..+|+++++|+++|+++
T Consensus 226 ~~va~a~G~~l~~~~~------~~~~~~~~~~~~~~sSM~qD~~~gr~tE-----------id~i~G~vv~~a~~~gv~~ 288 (320)
T 3i83_A 226 RAVAAANGHPLPEDIV------EKNVASTYKMPPYKTSMLVDFEAGQPME-----------TEVILGNAVRAGRRTRVAI 288 (320)
T ss_dssp HHHHHHTTCCCCTTHH------HHHHHHHHHSCCCCCHHHHHHHHTCCCC-----------HHHHTHHHHHHHHHTTCCC
T ss_pred HHHHHHcCCCCChHHH------HHHHHHHhcCCCCCCcHHHHHHhCCCch-----------HHHHccHHHHHHHHhCCCC
Confidence 9999999998542 21 11222222223333 4667777666553 4567899999999999999
Q ss_pred hHHHHHHHHHhc
Q 012596 429 PVLTAVARIIDN 440 (460)
Q Consensus 429 P~~~~v~~ll~~ 440 (460)
|+++++|++++.
T Consensus 289 P~~~~l~~~l~~ 300 (320)
T 3i83_A 289 PHLESVYALMKL 300 (320)
T ss_dssp HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999999974
No 11
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.98 E-value=2.1e-32 Score=275.63 Aligned_cols=290 Identities=15% Similarity=0.145 Sum_probs=212.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
++|||+|||+|+||+++|..|+++| ++|++|+|+ ++.+.+++.|.+... ++...+.++.+++++++ ++++|+||+
T Consensus 2 ~~mkI~IiGaG~~G~~~a~~L~~~g--~~V~~~~r~-~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~~D~Vil 76 (335)
T 3ghy_A 2 SLTRICIVGAGAVGGYLGARLALAG--EAINVLARG-ATLQALQTAGLRLTE-DGATHTLPVRATHDAAA-LGEQDVVIV 76 (335)
T ss_dssp CCCCEEEESCCHHHHHHHHHHHHTT--CCEEEECCH-HHHHHHHHTCEEEEE-TTEEEEECCEEESCHHH-HCCCSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC--CEEEEEECh-HHHHHHHHCCCEEec-CCCeEEEeeeEECCHHH-cCCCCEEEE
Confidence 4689999999999999999999999 899999996 678888887765432 23333344667778877 589999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCc--------cchhhh-----HHHHHHHHhCCCC------CCEEEEECcc
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLE--------LNTLRM-----MSQIIPQALRNPR------QPFIALSGPS 266 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~--------~~~~~~-----l~e~l~~~lg~~~------~~~~v~~gP~ 266 (460)
|||+++++++++++.+.++++++||+++||++ +.+.+. ..+.+.+.++... ...+.+.+|+
T Consensus 77 avk~~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~gv~~~~a~~~~pg 156 (335)
T 3ghy_A 77 AVKAPALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGCVVHLTCATVSPG 156 (335)
T ss_dssp CCCHHHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEEEEECCCEEESSTT
T ss_pred eCCchhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEEEEEEEEEEEcCCc
Confidence 99999999999999999999999999999974 111111 1134555554321 1124567788
Q ss_pred cHHHHhccCCeEEEEcc---CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHH----HHHHHHHHHHHhcccCCCcHH
Q 012596 267 FALELMNKLPTAMVVAS---KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGAL----KNVLAIAAGIVVGMNLGNNSM 339 (460)
Q Consensus 267 ~a~e~~~g~~~~i~i~~---~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kal----kNv~ai~~g~~~~~kl~~n~~ 339 (460)
++.+...+ .+.++. .+.+..+.+.++|+..+++++.++|+.+..|.|++ +|++++.+|+..+..++++..
T Consensus 157 ~v~~~~~g---~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~~~~~ 233 (335)
T 3ghy_A 157 HIRHGNGR---RLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLV 233 (335)
T ss_dssp EEEECSCC---EEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHHSHHH
T ss_pred EEEECCCC---eEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhcChHH
Confidence 77543322 345653 34577899999999999999999999999999977 466677777777777778888
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccc-hHHHHhhCCC-ChHHHHhhcccceehhhhHHHH
Q 012596 340 AALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGE-KLDDILSSMNQVAEGVSTAGAV 417 (460)
Q Consensus 340 ~al~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~-~~g~~l~~g~-~~e~~~~~~~~~~eg~kd~g~v 417 (460)
.+++.++++|+.++++++|++++...+ ...........++ +|.+|+.+|+ ++ |....+|++
T Consensus 234 ~~l~~~~~~E~~~va~a~G~~~~~~~~------~~~~~~~~~~~~~sSM~qD~~~gr~~t-----------Eid~i~G~v 296 (335)
T 3ghy_A 234 SAFCLAVMAEAKAIGARIGCPIEQSGE------ARSAVTRQLGAFKTSMLQDAEAGRGPL-----------EIDALVASV 296 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCSCHH------HHHHHHHTTCSCCCTTTC-----CCCC-----------CHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCccHH------HHHHHHhccCCCCcHHHHHHHcCCCCc-----------hHHHHhhHH
Confidence 999999999999999999998643221 0111111112232 4556666666 55 345678999
Q ss_pred HHHHHHcCCCChHHHHHHHHHhc
Q 012596 418 IALAQKYNVKMPVLTAVARIIDN 440 (460)
Q Consensus 418 v~lA~~~gv~~P~~~~v~~ll~~ 440 (460)
+++|+++|+++|+++++|++++.
T Consensus 297 v~~a~~~gv~~P~~~~l~~li~~ 319 (335)
T 3ghy_A 297 REIGLHVGVPTPQIDTLLGLVRL 319 (335)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHHH
Confidence 99999999999999999999974
No 12
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.97 E-value=2.7e-30 Score=256.07 Aligned_cols=288 Identities=17% Similarity=0.130 Sum_probs=206.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc---CCCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL---LGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~---~~aDi 202 (460)
+||||+|||+|+||+++|..|+++| ++|++|+|++++++.+++.|....+.++ .++.++.+++ ..++. +++|+
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~d~ 77 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG--NDVTLIDQWPAHIEAIRKNGLIADFNGE-EVVANLPIFS-PEEIDHQNEQVDL 77 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHCEEEEETTE-EEEECCCEEC-GGGCCTTSCCCSE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC--CcEEEEECCHHHHHHHHhCCEEEEeCCC-eeEecceeec-chhhcccCCCCCE
Confidence 3689999999999999999999999 8999999999999999887654332211 1111223333 23333 38999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCC------CCEEEEECcccHHHHhccCC
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR------QPFIALSGPSFALELMNKLP 276 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~------~~~~v~~gP~~a~e~~~g~~ 276 (460)
||+|||++.+.++++++.+.++++++||+++||+... +.+.+.++... ...+.+.||+.+.+...|..
T Consensus 78 vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~------~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~ 151 (316)
T 2ew2_A 78 IIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHE------DVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEI 151 (316)
T ss_dssp EEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTH------HHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCE
T ss_pred EEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcH------HHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcE
Confidence 9999999999999999999999999999999998752 22333332210 01123567776554444443
Q ss_pred eEEEEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhccc---C-CCcHHHHHHHHHHHHHHH
Q 012596 277 TAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMN---L-GNNSMAALVAQGCSEIRW 352 (460)
Q Consensus 277 ~~i~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~k---l-~~n~~~al~~~~~~E~~~ 352 (460)
......+.+.+..+.++++|+..|+.+...+|+.+.+|.|+++|+...+.+...+.. + .+.....++..++.|+..
T Consensus 152 ~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~ 231 (316)
T 2ew2_A 152 ELENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAA 231 (316)
T ss_dssp EEEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred EEeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHH
Confidence 322234557788999999999999999999999999999999998665555444432 1 223345889999999999
Q ss_pred HHHHcCCCcc--ccccccCCCceeeecccCC--Cccch-HHHHh-hCCCChHHHHhhcccceehhhhHHHHHHHHHHcCC
Q 012596 353 LATKMGAKPA--TITGLSGTGDIMLTCFVNL--SRNRT-VGVRL-GSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNV 426 (460)
Q Consensus 353 la~a~Gi~~~--~~~~~~~~gd~~~t~~s~~--srn~~-~g~~l-~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv 426 (460)
+++++|++++ .+.+ .+.++.+.. .++++ +.+|+ ..|++. |..+++++++++|+++|+
T Consensus 232 la~~~G~~~~~~~~~~------~~~~~~~~~~~~~~~~sm~~d~~~~g~~~-----------E~~~~~~~~~~~a~~~gv 294 (316)
T 2ew2_A 232 VAEKEAIYLDQAEVYT------HIVQTYDPNGIGLHYPSMYQDLIKNHRLT-----------EIDYINGAVWRKGQKYNV 294 (316)
T ss_dssp HHHHTTCCCCHHHHHH------HHHHTTCTTTTTTSCCHHHHHHTTTCCCC-----------SGGGTHHHHHHHHHHHTC
T ss_pred HHHHcCCCCChHHHHH------HHHHHhccccCCCCCcHHHHHHHHcCCcc-----------hHHHHhhHHHHHHHHhCC
Confidence 9999999973 2322 222233322 34443 67777 777654 345899999999999999
Q ss_pred CChHHHHHHHHHhc
Q 012596 427 KMPVLTAVARIIDN 440 (460)
Q Consensus 427 ~~P~~~~v~~ll~~ 440 (460)
++|+++.+|++++.
T Consensus 295 ~~P~~~~~~~~~~~ 308 (316)
T 2ew2_A 295 ATPFCAMLTQLVHG 308 (316)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999999874
No 13
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.96 E-value=1.4e-29 Score=250.52 Aligned_cols=273 Identities=12% Similarity=0.089 Sum_probs=194.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVil 205 (460)
+|||+|||+|+||+++|..|+++| ++|++|+|+++.++.... .+ ..+..+ ..+..+.+ +++|+||+
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g--~~V~~~~r~~~~~~~~~~--------~g-~~~~~~--~~~~~~~~~~~~D~vil 68 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSL--PHTTLIGRHAKTITYYTV--------PH-APAQDI--VVKGYEDVTNTFDVIII 68 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHC--TTCEEEESSCEEEEEESS--------TT-SCCEEE--EEEEGGGCCSCEEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHCC--CeEEEEEeccCcEEEEec--------CC-eeccce--ecCchHhcCCCCCEEEE
Confidence 479999999999999999999999 899999998643221000 01 122222 22344444 78999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHH--HhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ--ALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~--~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~ 283 (460)
|||+++++++++.+.++++++++||+++||++..+. +.. .++......+.+.||+++. .+ +..+.++
T Consensus 69 avk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~------~~~~~v~~g~~~~~a~~~~pg~v~---~~-~~~~~~~- 137 (294)
T 3g17_A 69 AVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH------IPFKNVCQAVVYISGQKKGDVVTH---FR-DYQLRIQ- 137 (294)
T ss_dssp CSCGGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG------CCCSCEEECEEEEEEEEETTEEEE---EE-EEEEEEE-
T ss_pred eCCccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh------CCCCcEEEEEEEEEEEEcCCCEEE---EC-CCEEecC-
Confidence 999999999999999999889999999999998641 111 1111001234567888762 12 3333343
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHH---HHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 012596 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAG---IVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (460)
Q Consensus 284 ~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g---~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~ 360 (460)
+.+..+.+.++|+..+++++.++|+.+.+|.|+++|+..+.++ ...+..+.++....++.+++.|+.++++++|++
T Consensus 138 -~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~ 216 (294)
T 3g17_A 138 -DNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLN 216 (294)
T ss_dssp -CSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred -ccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4577899999999999999999999999999999998433332 222333347788899999999999999999998
Q ss_pred ccc-cccccCCCceeeecccCCCccc-hHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHH
Q 012596 361 PAT-ITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARII 438 (460)
Q Consensus 361 ~~~-~~~~~~~gd~~~t~~s~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll 438 (460)
.+. ..+ +.+.........++ +|.+|+.+|+++| ....+|+++++|+++|+++|+++++|+++
T Consensus 217 l~~~~~~-----~~~~~~~~~~~~~~sSM~qD~~~gr~tE-----------id~i~G~vv~~a~~~gv~~P~~~~l~~ll 280 (294)
T 3g17_A 217 FSEQTVD-----TIMTIYQGYPDEMGTSMYYDIVHQQPLE-----------VEAIQGFIYRRAREHNLDTPYLDTIYSFL 280 (294)
T ss_dssp CCHHHHH-----HHHHHHHTSCTTCCCHHHHHHHTTCCCS-----------GGGTHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CCHHHHH-----HHHHHHhhcCCCCCCcHHHHHHcCCCcc-----------HHHhhhHHHHHHHHhCCCCChHHHHHHHH
Confidence 532 111 01111011112233 5678888887764 33678999999999999999999999998
Q ss_pred hc
Q 012596 439 DN 440 (460)
Q Consensus 439 ~~ 440 (460)
+.
T Consensus 281 ~~ 282 (294)
T 3g17_A 281 RA 282 (294)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 14
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.96 E-value=6.4e-29 Score=246.50 Aligned_cols=276 Identities=14% Similarity=0.144 Sum_probs=200.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
|+||||||+|.||.+||.+|.++| |+|++|||++++++.+.+.| ...++++.|+++.||+||+|
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G--~~v~v~dr~~~~~~~l~~~G--------------a~~a~s~~e~~~~~dvv~~~ 66 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAG--YLLNVFDLVQSAVDGLVAAG--------------ASAARSARDAVQGADVVISM 66 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTT--------------CEECSSHHHHHTTCSEEEEC
T ss_pred cCEEEEeeehHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHHcC--------------CEEcCCHHHHHhcCCceeec
Confidence 579999999999999999999999 99999999999999998876 35677999999999999999
Q ss_pred cchh-cHHHHHHH---hhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012596 207 MPVQ-FSSSFLEG---ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (460)
Q Consensus 207 Vp~~-~~~~vl~~---i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~ 282 (460)
+|.. ++++|+.. +.+.+++++++|++++ +.|++.+.+.+.+.+. | +.++.+|.++........+..++.
T Consensus 67 l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT-~~p~~~~~~a~~~~~~-G-----~~~lDaPVsGg~~~A~~G~L~imv 139 (300)
T 3obb_A 67 LPASQHVEGLYLDDDGLLAHIAPGTLVLECST-IAPTSARKIHAAARER-G-----LAMLDAPVSGGTAGAAAGTLTFMV 139 (300)
T ss_dssp CSCHHHHHHHHHSSSSSTTSCCC-CEEEECSC-CCHHHHHHHHHHHHTT-T-----CEEEECCEESCHHHHHHTCEEEEE
T ss_pred CCchHHHHHHHhchhhhhhcCCCCCEEEECCC-CCHHHHHHHHHHHHHc-C-----CEEEecCCCCCHHHHHhCCEEEEE
Confidence 9964 58888864 6778889999999997 7777766777766654 3 346666665544332223444666
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012596 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (460)
Q Consensus 283 ~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~ 362 (460)
+++.+.+++++++|+..+-++++.++. |.+..+|+.+|.+......++.|++.++++.|+|++
T Consensus 140 GG~~~~~~~~~p~l~~~g~~i~~~G~~-----------------G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~ 202 (300)
T 3obb_A 140 GGDAEALEKARPLFEAMGRNIFHAGPD-----------------GAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAK 202 (300)
T ss_dssp ESCHHHHHHHHHHHHHHEEEEEEEEST-----------------THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEeCCc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 778999999999999998888887774 233444556677777888999999999999999999
Q ss_pred cccccc--CCCcee-eecccCCC---ccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHH
Q 012596 363 TITGLS--GTGDIM-LTCFVNLS---RNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVAR 436 (460)
Q Consensus 363 ~~~~~~--~~gd~~-~t~~s~~s---rn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ 436 (460)
.+.++. +.+... .....+.. .......+...+++++. ..||+++++++|++.|+++|+.+.+.+
T Consensus 203 ~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~~l----------~~KDl~l~~~~A~~~g~~~p~~~~a~~ 272 (300)
T 3obb_A 203 VLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQL----------MAKDLGLAQEAAQASASSTPMGSLALS 272 (300)
T ss_dssp HHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHH----------HHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHHHHhCcccchHHHhhccccchhhhccccccCCccchHHH----------HHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 887742 222211 11111100 00001112223344432 458999999999999999999998888
Q ss_pred HHh-------cCCCHHHHHHHHh
Q 012596 437 IID-------NELTPKKAVLELM 452 (460)
Q Consensus 437 ll~-------~~~~~~~~~~~l~ 452 (460)
++. ++.+...+++.+.
T Consensus 273 ~~~~a~~~G~g~~D~sal~~~~e 295 (300)
T 3obb_A 273 LYRLLLKQGYAERDFSVVQKLFD 295 (300)
T ss_dssp HHHHHHHTTCTTSBGGGGHHHHC
T ss_pred HHHHHHhCCCCCcCHHHHHHHHH
Confidence 774 3445555555553
No 15
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.96 E-value=7.4e-29 Score=246.43 Aligned_cols=286 Identities=14% Similarity=0.105 Sum_probs=194.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhc-----CCCCeEEEEeCCHHHHHHHHh-hcCCCccCCCCCCCCceEEeCCHHhhcCCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANK-----KSQLKVYMLMRDPAVCQSINE-KHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~-----G~~~~V~v~~r~~~~~~~l~~-~g~~~~~~~~~~l~~~i~a~~~~~ea~~~a 200 (460)
+|||+|||+|+||++||..|+++ | .++|++|+| +++++.+++ .|......++.....++.++++.+ .++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g-~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 84 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDG-LLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPA-EVGTV 84 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTS-SEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHH-HHCCE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCC-CCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCcc-ccCCC
Confidence 47999999999999999999988 6 268999999 788899988 665433222211112345556654 46899
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCC------CEEEEECcccHHHHhcc
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQ------PFIALSGPSFALELMNK 274 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~------~~~v~~gP~~a~e~~~g 274 (460)
|+||+|||++++.++++++.+.++++++||+++||++.. +.+.+.++...+ ..+.+.||+...+...|
T Consensus 85 D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~------~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g 158 (317)
T 2qyt_A 85 DYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIA------ERMRTYLPDTVVWKGCVYISARKSAPGLITLEADR 158 (317)
T ss_dssp EEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHH------HHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEE
T ss_pred CEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcH------HHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCC
Confidence 999999999999999999999888889999999998653 344554443111 12234556554332222
Q ss_pred CCeEEEEcc----CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcH--HHHHHHHHHH
Q 012596 275 LPTAMVVAS----KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNS--MAALVAQGCS 348 (460)
Q Consensus 275 ~~~~i~i~~----~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~--~~al~~~~~~ 348 (460)
...++++ .+.+.+ .+.++|+..|+.+++.+|+...+|.|+++|+...+.+...+...+.+. ...++..+++
T Consensus 159 --~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~ 235 (317)
T 2qyt_A 159 --ELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLE 235 (317)
T ss_dssp --EEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHH
T ss_pred --ceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 2222543 346777 899999999999999999999999999999987776666665544332 3478889999
Q ss_pred HHHHHHHHcCCCccc--cccccCCCceeeecccCCCccc-hHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcC
Q 012596 349 EIRWLATKMGAKPAT--ITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYN 425 (460)
Q Consensus 349 E~~~la~a~Gi~~~~--~~~~~~~gd~~~t~~s~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~g 425 (460)
|+..+++++|+++++ +.+ .+.++....++++ ++.+|+..|+++| ....+++++++|+++|
T Consensus 236 E~~~v~~a~G~~~~~~~~~~------~~~~~~~~~~~~~~sm~~d~~~g~~~E-----------~~~~~g~~~~~a~~~g 298 (317)
T 2qyt_A 236 EVAELFRAKYGQVPDDVVQQ------LLDKQRKMPPESTSSMHSDFLQGGSTE-----------VETLTGYVVREAEALR 298 (317)
T ss_dssp HHHHHHHHHTSCCCSSHHHH------HHHHHHHC-------------------------------CTTTHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCChHHHHH------HHHHHhccCCCCCChHHHHHHcCCccC-----------HHHHhhHHHHHHHHcC
Confidence 999999999999742 222 2222222223333 2456666665543 3356899999999999
Q ss_pred CCChHHHHHHHHHhcC
Q 012596 426 VKMPVLTAVARIIDNE 441 (460)
Q Consensus 426 v~~P~~~~v~~ll~~~ 441 (460)
+++|+++.+|++++..
T Consensus 299 v~~P~~~~~~~~~~~~ 314 (317)
T 2qyt_A 299 VDLPMYKRMYRELVSR 314 (317)
T ss_dssp CCCHHHHHHHHTTCC-
T ss_pred CCCCHHHHHHHHHHHH
Confidence 9999999999988753
No 16
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.95 E-value=2.8e-28 Score=242.74 Aligned_cols=280 Identities=11% Similarity=0.024 Sum_probs=199.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
+|||+|||+|+||+++|..|+ +| ++|++|+|++++++.+++.|.+... ++...+..+... .++...+|+||+|
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g--~~V~~~~r~~~~~~~l~~~G~~~~~-~~~~~~~~~~~~---~~~~~~~D~vila 74 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LY--HDVTVVTRRQEQAAAIQSEGIRLYK-GGEEFRADCSAD---TSINSDFDLLVVT 74 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT--SEEEEECSCHHHHHHHHHHCEEEEE-TTEEEEECCEEE---SSCCSCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cC--CceEEEECCHHHHHHHHhCCceEec-CCCeeccccccc---ccccCCCCEEEEE
Confidence 489999999999999999999 88 9999999999999999888764331 121112112221 2346789999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCC------CCEEEEECcccHHHHhccCCeEEE
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR------QPFIALSGPSFALELMNKLPTAMV 280 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~------~~~~v~~gP~~a~e~~~g~~~~i~ 280 (460)
||+++++++++.+.+. .+++ ||+++||++.+ +.+.+.+|... ...+...+|+...+...| .+.
T Consensus 75 vK~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~------e~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~g---~~~ 143 (307)
T 3ego_A 75 VKQHQLQSVFSSLERI-GKTN-ILFLQNGMGHI------HDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLG---AIK 143 (307)
T ss_dssp CCGGGHHHHHHHTTSS-CCCE-EEECCSSSHHH------HHHHTCCCSCEEEEEEECCEEEECSSSEEEEEECC---CEE
T ss_pred eCHHHHHHHHHHhhcC-CCCe-EEEecCCccHH------HHHHHhCCCCcEEEEEEeeceEECCCCEEEEeeee---eEE
Confidence 9999999999999875 5666 99999999864 34555555321 112344567665433222 234
Q ss_pred EccCC--HHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCC----cHHHHHHHHHHHHHHHHH
Q 012596 281 VASKD--RKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGN----NSMAALVAQGCSEIRWLA 354 (460)
Q Consensus 281 i~~~d--~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~----n~~~al~~~~~~E~~~la 354 (460)
++..+ .+.++++.++|...++++..++|+....|.|+++|+..+..+...+..++. .....++..++.|+.+++
T Consensus 144 iG~~~~~~~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E~~~va 223 (307)
T 3ego_A 144 WSAFDDAEPDRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACRIL 223 (307)
T ss_dssp EEECTTCCGGGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHHHHHHH
Confidence 55322 455677888888899999999999999999999999777777766776663 345788999999999999
Q ss_pred HHcCCCccccccccCCCceeeecccCCCcc-chHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHH
Q 012596 355 TKMGAKPATITGLSGTGDIMLTCFVNLSRN-RTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTA 433 (460)
Q Consensus 355 ~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn-~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~ 433 (460)
++.+ ++.+.+. .+..+... ..+ .+|-+|+.+|+++| ....+|+++++|+++|+++|++++
T Consensus 224 ~~~~--~~~~~~~-----~~~~~~~~-~~~~sSM~qD~~~gr~tE-----------id~i~G~vv~~a~~~gv~tP~~~~ 284 (307)
T 3ego_A 224 KLEN--EEKAWER-----VQAVCGQT-KENRSSMLVDVIGGRQTE-----------ADAIIGYLLKEASLQGLDAVHLEF 284 (307)
T ss_dssp TCSC--HHHHHHH-----HHHHHHHT-TTCCCHHHHHHHHTCCCS-----------HHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred hccC--hHHHHHH-----HHHHHHhc-CCCCchHHHHHHcCCccc-----------HHHhhhHHHHHHHHcCCCCcHHHH
Confidence 7653 2222210 00001111 122 25667887777664 346789999999999999999999
Q ss_pred HHHHHhcCCC
Q 012596 434 VARIIDNELT 443 (460)
Q Consensus 434 v~~ll~~~~~ 443 (460)
+|++++..+.
T Consensus 285 l~~li~~~e~ 294 (307)
T 3ego_A 285 LYGSIKALER 294 (307)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHHHh
Confidence 9999986554
No 17
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.95 E-value=7.4e-27 Score=243.06 Aligned_cols=271 Identities=17% Similarity=0.167 Sum_probs=211.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-------CCCceEEeCCHHhhcCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-------LPENVIATTDAKTALLG 199 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~-------l~~~i~a~~~~~ea~~~ 199 (460)
..+|+|||+|+||.+||..|+++| ++|++||+++++++.+++ |.++.|.++.. .+.++++++|+++++++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~kv~~l~~-g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~ 84 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDARKIELLHQ-NVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKD 84 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHTT-TCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHhc-CCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhc
Confidence 478999999999999999999999 999999999999999987 56677777654 35678999999999999
Q ss_pred CcEEEEccchh-----------cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccH
Q 012596 200 ADYCLHAMPVQ-----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFA 268 (460)
Q Consensus 200 aDiVilaVp~~-----------~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a 268 (460)
||+||+|||+. .+++++++|.+.++++++||..+ ++.+++.+.+.+.+.+..+. ..+.+.++|.++
T Consensus 85 aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~~~--~d~~v~~~Pe~a 161 (446)
T 4a7p_A 85 ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEVAPN--SGAKVVSNPEFL 161 (446)
T ss_dssp CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHHSTT--SCCEEEECCCCC
T ss_pred CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHhCCC--CCceEEeCcccc
Confidence 99999998854 48899999999999999999988 69999888888888876443 467899999998
Q ss_pred HHHhc----cCCeEEEEccCCHHHHHHHHHHHhcCCce---EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHH
Q 012596 269 LELMN----KLPTAMVVASKDRKLANAVQQLLASKHLR---ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (460)
Q Consensus 269 ~e~~~----g~~~~i~i~~~d~~~~~~l~~lL~~~g~~---v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~a 341 (460)
.+... +.++.+++|+.+.+..++++++|+..+-. ++...|+.+.+..|+ .+|.+.+
T Consensus 162 ~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl-----------------~~N~~~a 224 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKY-----------------AANAFLA 224 (446)
T ss_dssp CTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHH-----------------HHHHHHH
T ss_pred cccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHH-----------------HHHHHHH
Confidence 76432 45666778877789999999999976543 466778777766654 4556777
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHH
Q 012596 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALA 421 (460)
Q Consensus 342 l~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA 421 (460)
+..++++|+..+|+++|+|++++.+..+....+. .+.+.+|.-+ .|.. ..||.++++..|
T Consensus 225 ~~ia~~nE~~~l~~~~GiD~~~v~~~~~~~~rig------~~~l~pg~G~-gg~c-------------~~KD~~~l~~~A 284 (446)
T 4a7p_A 225 VKITFINEIADLCEQVGADVQEVSRGIGMDNRIG------GKFLHAGPGY-GGSC-------------FPKDTLALMKTA 284 (446)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTC---------CCCCCSCC-CTTT-------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCC------CccCCCCCCc-chhh-------------HHHHHHHHHHHH
Confidence 8899999999999999999998887543221000 0000111000 1222 238999999999
Q ss_pred HHcCCCChHHHHHHHHHhc
Q 012596 422 QKYNVKMPVLTAVARIIDN 440 (460)
Q Consensus 422 ~~~gv~~P~~~~v~~ll~~ 440 (460)
+++|+++|+.+++.++...
T Consensus 285 ~~~g~~~~l~~~~~~iN~~ 303 (446)
T 4a7p_A 285 ADNETPLRIVEATVQVNDA 303 (446)
T ss_dssp HHTTCCCHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHH
Confidence 9999999999999987543
No 18
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.95 E-value=1.4e-27 Score=236.74 Aligned_cols=255 Identities=15% Similarity=0.140 Sum_probs=182.6
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEcc
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (460)
+||||||+|.||.+||.+|+++| |+|++|||++++++++.+.| ...++++.|+++.+|+||+|+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G--~~V~v~dr~~~~~~~l~~~G--------------~~~~~s~~e~~~~~dvvi~~l 69 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAG--YELVVWNRTASKAEPLTKLG--------------ATVVENAIDAITPGGIVFSVL 69 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--CEEEEC-------CTTTTTT--------------CEECSSGGGGCCTTCEEEECC
T ss_pred CcEEEEecHHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcC--------------CeEeCCHHHHHhcCCceeeec
Confidence 58999999999999999999999 99999999998887766554 456778999999999999999
Q ss_pred chh-cHHHHH-HHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCC
Q 012596 208 PVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKD 285 (460)
Q Consensus 208 p~~-~~~~vl-~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~~d 285 (460)
|+. ++++++ ..+.+.+++++++|++++ +.|++.+.+.+.+.+. | +.++.+|..+........+..++.+++
T Consensus 70 ~~~~~~~~v~~~~~~~~~~~~~iiid~sT-~~p~~~~~~~~~~~~~-g-----~~~ldapVsGg~~~a~~g~l~im~gG~ 142 (297)
T 4gbj_A 70 ADDAAVEELFSMELVEKLGKDGVHVSMST-ISPETSRQLAQVHEWY-G-----AHYVGAPIFARPEAVRAKVGNICLSGN 142 (297)
T ss_dssp SSHHHHHHHSCHHHHHHHCTTCEEEECSC-CCHHHHHHHHHHHHHT-T-----CEEEECCEECCHHHHHHTCCEEEEEEC
T ss_pred cchhhHHHHHHHHHHhhcCCCeEEEECCC-CChHHHHHHHHHHHhc-C-----CceecCCcCCCccccccccceeecccc
Confidence 975 455554 557778889999999997 7777767777776654 3 346666666543322222223556678
Q ss_pred HHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccccc
Q 012596 286 RKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATIT 365 (460)
Q Consensus 286 ~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~~~~ 365 (460)
.+.+++++++|+..+-++++..+.. |.+..+|+.+|.+......++.|++.++++.|+|+++++
T Consensus 143 ~~~~~~~~~~l~~~g~~i~~~g~~~----------------G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~ 206 (297)
T 4gbj_A 143 AGAKERIKPIVENFVKGVFDFGDDP----------------GAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIY 206 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCT----------------THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hhHHHHHHHHHHHhhCCeEEecCCc----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 9999999999999998887766422 233445556677778888999999999999999999988
Q ss_pred ccc--CCCceeeecccCCCccchHHHHhh------CCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHH
Q 012596 366 GLS--GTGDIMLTCFVNLSRNRTVGVRLG------SGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARI 437 (460)
Q Consensus 366 ~~~--~~gd~~~t~~s~~srn~~~g~~l~------~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~l 437 (460)
++. +.+... ..++ .+..+. .|++++ ...||+++++++|++.|+++|+.+.+.++
T Consensus 207 ~~l~~~~~~s~------~~~~--~~~~~~~~~~~p~~f~~~----------l~~KDl~l~~~~A~~~g~~~p~~~~~~~~ 268 (297)
T 4gbj_A 207 EMLTSTLFAAP------IFQN--YGKLVASNTYEPVAFRFP----------LGLKDINLTLQTASDVNAPMPFADIIRNR 268 (297)
T ss_dssp HHHHTTTTCSH------HHHH--HHHHHHHTCCCSCSSBHH----------HHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHhhcccCc------hhhc--cCccccCCCCCCccchhH----------HHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 752 111100 0011 122221 133333 24599999999999999999999999888
Q ss_pred Hh
Q 012596 438 ID 439 (460)
Q Consensus 438 l~ 439 (460)
+.
T Consensus 269 ~~ 270 (297)
T 4gbj_A 269 FI 270 (297)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 19
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.94 E-value=2.9e-26 Score=241.09 Aligned_cols=277 Identities=20% Similarity=0.207 Sum_probs=210.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--C-----CCceEEeCCHHhhcC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L-----PENVIATTDAKTALL 198 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~--l-----~~~i~a~~~~~ea~~ 198 (460)
..|||+|||+|+||+++|..|+++| ++|++||+++++++.+++.+ ...+.++.. + ..++.+++|++++++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~~~v~~l~~~~-~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQAKIDILNNGG-VPIHEPGLKEVIARNRSAGRLRFSTDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHHhcccCCEEEECCHHHHhh
Confidence 4699999999999999999999999 99999999999999998865 444544432 1 235788999988889
Q ss_pred CCcEEEEccch----------hcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCC-CC-CCEEEEECcc
Q 012596 199 GADYCLHAMPV----------QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRN-PR-QPFIALSGPS 266 (460)
Q Consensus 199 ~aDiVilaVp~----------~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~-~~-~~~~v~~gP~ 266 (460)
+||+||+|||+ ..+++++++|.++++++++||..+ |+.+++.+.+.+.+.+.++. .+ ..+.+.++|.
T Consensus 84 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S-Tv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~Pe 162 (478)
T 2y0c_A 84 HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS-TVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPE 162 (478)
T ss_dssp HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCC
T ss_pred cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CcCCCchHHHHHHHHHHhcCCCCCccEEEEEChh
Confidence 99999999998 789999999999999999998887 78888777777877765321 11 3577899999
Q ss_pred cHHHHhc----cCCeEEEEccCCH----HHHHHHHHHHhcCCc--eEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 012596 267 FALELMN----KLPTAMVVASKDR----KLANAVQQLLASKHL--RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGN 336 (460)
Q Consensus 267 ~a~e~~~----g~~~~i~i~~~d~----~~~~~l~~lL~~~g~--~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~ 336 (460)
++.+... +.+..+++++.+. +..+.++++|+.... .++...|+.+.+|.|++.|.
T Consensus 163 ~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~--------------- 227 (478)
T 2y0c_A 163 FLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANA--------------- 227 (478)
T ss_dssp CCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHH---------------
T ss_pred hhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHH---------------
Confidence 8765322 4455567777655 788999999986432 47778889999998876664
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHH
Q 012596 337 NSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGA 416 (460)
Q Consensus 337 n~~~al~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~ 416 (460)
+.++..++++|+..+|++.|++++++.+..+....+ ..+++.+|..+ .|.+. .||.++
T Consensus 228 --~~a~~ia~~nE~~~la~~~Gid~~~v~~~i~~~~ri------g~~~~~pG~g~-gg~c~-------------~kD~~~ 285 (478)
T 2y0c_A 228 --MLATRISFMNELANLADRFGADIEAVRRGIGSDPRI------GYHFLYAGCGY-GGSCF-------------PKDVEA 285 (478)
T ss_dssp --HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTT------CSTTCCCSSCC-CSSSH-------------HHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCCcc------CcccCCCCccc-ccCcC-------------HHHHHH
Confidence 566778899999999999999988776532211000 01122222211 12222 278999
Q ss_pred HHHHHHHcCCCChHHHHHHHHHhcCCC
Q 012596 417 VIALAQKYNVKMPVLTAVARIIDNELT 443 (460)
Q Consensus 417 vv~lA~~~gv~~P~~~~v~~ll~~~~~ 443 (460)
++++|+++|+++|+++++++++.....
T Consensus 286 l~~~A~~~gv~~pl~~~v~~in~~~~~ 312 (478)
T 2y0c_A 286 LIRTADEHGQSLQILKAVSSVNATQKR 312 (478)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHhHH
Confidence 999999999999999999999987655
No 20
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.94 E-value=1.1e-26 Score=231.49 Aligned_cols=277 Identities=16% Similarity=0.170 Sum_probs=196.5
Q ss_pred cCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..||||+|||+|.||..||..|+++| ++|++|||++++++.+.+.| +..+++++++++++|+||
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~~~~~l~~~g--------------~~~~~~~~~~~~~aDvvi 82 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNG--FKVTVWNRTLSKCDELVEHG--------------ASVCESPAEVIKKCKYTI 82 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSGGGGHHHHHTT--------------CEECSSHHHHHHHCSEEE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHCC--------------CeEcCCHHHHHHhCCEEE
Confidence 35789999999999999999999999 99999999999988888754 345678999899999999
Q ss_pred Eccch-hcHHHHH---HHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEE
Q 012596 205 HAMPV-QFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (460)
Q Consensus 205 laVp~-~~~~~vl---~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~ 280 (460)
+|||. ..+++++ +++.+.++++++||++++ +.+.+.+.+.+.+.+. |. .++..|...........+..+
T Consensus 83 ~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st-~~~~~~~~~~~~~~~~-g~-----~~v~~pv~g~~~~a~~g~l~i 155 (310)
T 3doj_A 83 AMLSDPCAALSVVFDKGGVLEQICEGKGYIDMST-VDAETSLKINEAITGK-GG-----RFVEGPVSGSKKPAEDGQLII 155 (310)
T ss_dssp ECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSC-CCHHHHHHHHHHHHHT-TC-----EEEECCEECCHHHHHHTCEEE
T ss_pred EEcCCHHHHHHHHhCchhhhhccCCCCEEEECCC-CCHHHHHHHHHHHHHc-CC-----EEEeCCCCCChhHHhcCCeEE
Confidence 99996 4788888 788888999999999885 6665555566666543 32 244455443322111123334
Q ss_pred EccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 012596 281 VASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (460)
Q Consensus 281 i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~ 360 (460)
+.+++.+.+++++++|+..|.++...++....++.|++ +|.+......+++|+..++++.|++
T Consensus 156 ~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~-----------------~N~~~~~~~~~~~Ea~~l~~~~G~d 218 (310)
T 3doj_A 156 LAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLI-----------------VNMIMGSMMNAFSEGLVLADKSGLS 218 (310)
T ss_dssp EEEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred EEcCCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 55567899999999999999888888775444555544 4455566678899999999999999
Q ss_pred ccccccccCCCceeeecccCCCccchHHHHhhCCC-ChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHh
Q 012596 361 PATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGE-KLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (460)
Q Consensus 361 ~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~-~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~ 439 (460)
++++.++.+.+. +.+...++ .+..+..+. ... .....+.||+++++++|+++|+++|+++.+++++.
T Consensus 219 ~~~~~~~~~~~~----~~s~~~~~--~~~~~~~~~~~~~------f~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~ 286 (310)
T 3doj_A 219 SDTLLDILDLGA----MTNPMFKG--KGPSMNKSSYPPA------FPLKHQQKDMRLALALGDENAVSMPVAAAANEAFK 286 (310)
T ss_dssp HHHHHHHHHHST----TCCHHHHH--HHHHHHTTCCCCS------SBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc----cccHHHHH--HhhhhhcCCCCCC------ccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 998876522110 11110111 123332221 100 12234569999999999999999999999999885
Q ss_pred -------cCCCHHHHHHHHhc
Q 012596 440 -------NELTPKKAVLELMS 453 (460)
Q Consensus 440 -------~~~~~~~~~~~l~~ 453 (460)
+..+...+++.+..
T Consensus 287 ~a~~~g~g~~d~~~~~~~~~~ 307 (310)
T 3doj_A 287 KARSLGLGDLDFSAVIEAVKF 307 (310)
T ss_dssp HHHHTTCTTSBGGGGHHHHHC
T ss_pred HHHHcCCCCcCHHHHHHHHHh
Confidence 23445556666654
No 21
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.94 E-value=8.1e-26 Score=236.06 Aligned_cols=275 Identities=19% Similarity=0.187 Sum_probs=211.3
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--C-----CCceEEeCCHHhhcCCC
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L-----PENVIATTDAKTALLGA 200 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~--l-----~~~i~a~~~~~ea~~~a 200 (460)
|||+|||+|.||.++|..|+++| ++|++||+++++++.+++ |....|.++.. + ..++.+++++++++++|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~~v~~l~~-g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDRNKIEQLNS-GTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH-TCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHc-CCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 79999999999999999999999 999999999999999987 55555555432 1 35688899999989999
Q ss_pred cEEEEccchh----------cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC--CCCEEEEECcccH
Q 012596 201 DYCLHAMPVQ----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFA 268 (460)
Q Consensus 201 DiVilaVp~~----------~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~--~~~~~v~~gP~~a 268 (460)
|+||+|||+. .+.+++++|.++++++++||+.++ +.+++.+.+.+.+.+..+.. ...+.+.++|.++
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ST-v~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a 158 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKST-VPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFL 158 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSC-CCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCC
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeee-CCCcchHHHHHHHHHhccccCcCcceeEEechhhh
Confidence 9999999977 789999999999999999999884 88888778888887654321 1457899999988
Q ss_pred HHHhc----cCCeEEEEccCCHHHHHHHHHHHhcCCc--eEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHH
Q 012596 269 LELMN----KLPTAMVVASKDRKLANAVQQLLASKHL--RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAAL 342 (460)
Q Consensus 269 ~e~~~----g~~~~i~i~~~d~~~~~~l~~lL~~~g~--~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al 342 (460)
.+... ..++.+++++.+.+..++++++|+..+. ..+...|+.+.++.|+ .+|.+.++
T Consensus 159 ~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl-----------------~~N~~~a~ 221 (450)
T 3gg2_A 159 KEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKY-----------------AANAMLAT 221 (450)
T ss_dssp CTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHH-----------------HHHHHHHH
T ss_pred cccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHH-----------------HHHHHHHH
Confidence 75432 4556677887788999999999997653 2455678877777654 44567788
Q ss_pred HHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHH
Q 012596 343 VAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQ 422 (460)
Q Consensus 343 ~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~ 422 (460)
..++++|+..+|+++|+|++++.+..+....+ . ...+.+|..+ .|.. ..||.++++..|+
T Consensus 222 ~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~ri----g--~~~~~pg~G~-gg~c-------------~~KD~~~l~~~a~ 281 (450)
T 3gg2_A 222 RISFMNDVANLCERVGADVSMVRLGIGSDSRI----G--SKFLYPGCGY-GGSC-------------FPKDVKALIRTAE 281 (450)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHTSTTT----C--SSSCCCSSCC-CSSH-------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHcCCCCC----C--cccCCCCCCC-Cccc-------------HHhhHHHHHHHHH
Confidence 89999999999999999999988764332111 0 0111111101 1111 2489999999999
Q ss_pred HcCCCChHHHHHHHHHhcCCC
Q 012596 423 KYNVKMPVLTAVARIIDNELT 443 (460)
Q Consensus 423 ~~gv~~P~~~~v~~ll~~~~~ 443 (460)
++|+++|+.+++.++......
T Consensus 282 ~~g~~~~l~~~~~~iN~~~~~ 302 (450)
T 3gg2_A 282 DNGYRMEVLEAVERVNEKQKS 302 (450)
T ss_dssp HTTCCCHHHHHHHHHHHHHTT
T ss_pred HcCCCcHHHHHHHHHHHHHHH
Confidence 999999999999998765444
No 22
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.94 E-value=3.2e-26 Score=226.64 Aligned_cols=264 Identities=13% Similarity=0.086 Sum_probs=186.7
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
|+++|||+|||+|.||..||..|+++| ++|++|||++++++.+.+.| +..+++++++++ +|+|
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~~~~~-aDvv 74 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWP--GGVTVYDIRIEAMTPLAEAG--------------ATLADSVADVAA-ADLI 74 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTST--TCEEEECSSTTTSHHHHHTT--------------CEECSSHHHHTT-SSEE
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHCC--------------CEEcCCHHHHHh-CCEE
Confidence 434579999999999999999999999 99999999999888888754 356678999888 9999
Q ss_pred EEccch-hcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012596 204 LHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (460)
Q Consensus 204 ilaVp~-~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~ 282 (460)
|+|||. ..++++++++.+.++++++||++++ ..+.+.+.+.+.+.+. | ..++.+|.+............++.
T Consensus 75 i~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~~~~ 147 (296)
T 3qha_A 75 HITVLDDAQVREVVGELAGHAKPGTVIAIHST-ISDTTAVELARDLKAR-D-----IHIVDAPVSGGAAAAARGELATMV 147 (296)
T ss_dssp EECCSSHHHHHHHHHHHHTTCCTTCEEEECSC-CCHHHHHHHHHHHGGG-T-----CEEEECCEESCHHHHHHTCEEEEE
T ss_pred EEECCChHHHHHHHHHHHHhcCCCCEEEEeCC-CCHHHHHHHHHHHHHc-C-----CEEEeCCCcCCHHHHhcCCccEEe
Confidence 999995 5788999999999999999999886 5555445555555443 3 234555554433221112333555
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012596 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (460)
Q Consensus 283 ~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~ 362 (460)
+++.+.+++++++|+..+.++++.++....++ +|+.+|.+......+++|+..++++.|++++
T Consensus 148 gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~-----------------~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~ 210 (296)
T 3qha_A 148 GADREVYERIKPAFKHWAAVVIHAGEPGAGTR-----------------MKLARNMLTFTSYAAACEAMKLAEAAGLDLQ 210 (296)
T ss_dssp ECCHHHHHHHHHHHHHHEEEEEEEESTTHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred cCCHHHHHHHHHHHHHHcCCeEEcCChhHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 66889999999999998888877776433334 3445566677788899999999999999999
Q ss_pred cc------cccc--CCCceeeecc-cCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHH
Q 012596 363 TI------TGLS--GTGDIMLTCF-VNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTA 433 (460)
Q Consensus 363 ~~------~~~~--~~gd~~~t~~-s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~ 433 (460)
++ .+.. +.+..+.... ....+ |..++.+.. ... ....||+++++++|+++|+++|+.+.
T Consensus 211 ~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~-~~~~f~~~~--~~~---------~~~~KD~~~~~~~a~~~g~~~p~~~~ 278 (296)
T 3qha_A 211 ALGRVVRHTDALTGGPGAIMVRDNMKDLEP-DNFLYQPFL--HTR---------GLGEKDLSLALALGEAVSVDLPLARL 278 (296)
T ss_dssp HHHHHHHHHHHHHCCGGGGCCCSSCSCCCT-TSTTHHHHH--HHH---------HHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHhhhcchHHHHhcCcccCHHhhchhhhhc-CCCCCchhh--hhh---------HHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 98 6542 2222111100 01111 222221100 000 12459999999999999999999999
Q ss_pred HHHHHhc
Q 012596 434 VARIIDN 440 (460)
Q Consensus 434 v~~ll~~ 440 (460)
+++++..
T Consensus 279 ~~~~~~~ 285 (296)
T 3qha_A 279 AYEGLAA 285 (296)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998853
No 23
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.94 E-value=4.1e-27 Score=230.68 Aligned_cols=284 Identities=13% Similarity=0.123 Sum_probs=191.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEcc
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (460)
|||+|||+|+||+++|..|+++| ++|++|+|++++++.+...+.+ +..++..+. .++. ++++++|+||+||
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~~~~~~~l~~~~~~-----~~~~~~~~~-~~~~-~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG--HEVQGWLRVPQPYCSVNLVETD-----GSIFNESLT-ANDP-DFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCSEEEEEEECTT-----SCEEEEEEE-ESCH-HHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC--CCEEEEEcCccceeeEEEEcCC-----Cceeeeeee-ecCc-cccCCCCEEEEEe
Confidence 68999999999999999999999 8999999997654433222210 000111122 2444 5568999999999
Q ss_pred chhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCCHH
Q 012596 208 PVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKDRK 287 (460)
Q Consensus 208 p~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~~d~~ 287 (460)
|++++.++++++.+.++++++||+++||+... +.+.+.+.+.++......+.+.|| .+.+...|. ..+...+.+.+
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~~--~~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~g~-~~i~~~~~~~~ 147 (291)
T 1ks9_A 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTI--EELQNIQQPLLMGTTTHAARRDGN-VIIHVANGI-THIGPARQQDG 147 (291)
T ss_dssp CGGGHHHHHHHHHTTSCTTSCEEEECSSSCTT--GGGTTCCSCEEEEEECCEEEEETT-EEEEEECCC-EEEEESSGGGT
T ss_pred cHHhHHHHHHHHHhhCCCCCEEEEecCCCCcH--HHHHHhcCCeEEEEEeEccEEcCC-EEEEecccc-eEEccCCCCcc
Confidence 99999999999999999999999999998653 122222221111100113357788 544333443 22222234456
Q ss_pred HHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCc-HHHHHHHHHHHHHHHHHHHcCCCc--ccc
Q 012596 288 LANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNN-SMAALVAQGCSEIRWLATKMGAKP--ATI 364 (460)
Q Consensus 288 ~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n-~~~al~~~~~~E~~~la~a~Gi~~--~~~ 364 (460)
..++++++|+..|.++++.+|+.+..|.|++.|......+...+...+.- ....++..++.|+.++++++|+++ +.+
T Consensus 148 ~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~ 227 (291)
T 1ks9_A 148 DYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDL 227 (291)
T ss_dssp TCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred hHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 67899999999999999999999999999999876544433333322210 024788999999999999999986 233
Q ss_pred ccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHhc
Q 012596 365 TGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDN 440 (460)
Q Consensus 365 ~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~~ 440 (460)
.+ .+.+....+.+ ...++-+|+..|++.| ..++.|+++++|+++|+++|+++.+|++++.
T Consensus 228 ~~--~~~~~~~~~~~---~~ssm~~d~~~g~~~e-----------~~~~~g~~~~~a~~~gv~~P~~~~~~~~~~~ 287 (291)
T 1ks9_A 228 RD--YVMQVIDATAE---NISSMLQDIRALRHTE-----------IDYINGFLLRRARAHGIAVPENTRLFEMVKR 287 (291)
T ss_dssp HH--HHHHHHHHTTT---CCCHHHHHHHTTCCCS-----------GGGTHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HH--HHHHHHhcCCC---CCChHHHHHHcCCccH-----------HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 21 11111111111 1123446777666543 3367899999999999999999999999863
No 24
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.94 E-value=1e-25 Score=225.53 Aligned_cols=271 Identities=18% Similarity=0.204 Sum_probs=194.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
++|||+|||+|.||..||..|+++| ++|++|||++++++.+.+.| +..+++++++++++|+||+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~l~~~g--------------~~~~~~~~e~~~~aDvVi~ 93 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAG--YALQVWNRTPARAASLAALG--------------ATIHEQARAAARDADIVVS 93 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTT--------------CEEESSHHHHHTTCSEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHHCC--------------CEeeCCHHHHHhcCCEEEE
Confidence 4689999999999999999999999 99999999999999888754 3566789999999999999
Q ss_pred ccch-hcHHHHHH--HhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012596 206 AMPV-QFSSSFLE--GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (460)
Q Consensus 206 aVp~-~~~~~vl~--~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~ 282 (460)
|||. ..++.++. ++.+.++++++||++++ ..+.+.+.+.+.+.+. | ..++.+|.+............++.
T Consensus 94 ~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~i~~ 166 (320)
T 4dll_A 94 MLENGAVVQDVLFAQGVAAAMKPGSLFLDMAS-ITPREARDHAARLGAL-G-----IAHLDTPVSGGTVGAEQGTLVIMA 166 (320)
T ss_dssp CCSSHHHHHHHHTTTCHHHHCCTTCEEEECSC-CCHHHHHHHHHHHHHT-T-----CEEEECCEECHHHHHHHTCEEEEE
T ss_pred ECCCHHHHHHHHcchhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHc-C-----CEEEeCCCcCCHhHHhcCCeeEEe
Confidence 9996 57888887 78888889999999986 4555445555555543 3 345566666544322122333455
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012596 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (460)
Q Consensus 283 ~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~ 362 (460)
+++.+.+++++++|+.. .++.+.++....++.| +.+|.+......+++|+..++++.|++++
T Consensus 167 gg~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~~K-----------------l~~N~~~~~~~~~~~Ea~~l~~~~G~d~~ 228 (320)
T 4dll_A 167 GGKPADFERSLPLLKVF-GRATHVGPHGSGQLTK-----------------LANQMIVGITIGAVAEALLFATKGGADMA 228 (320)
T ss_dssp ESCHHHHHHHHHHHHHH-EEEEEEESTTHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHTSCCHH
T ss_pred CCCHHHHHHHHHHHHhc-CCEEEeCCccHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 66889999999999988 7777776654344444 34555666778899999999999999999
Q ss_pred ccccccCCCceeeecccCCCccchHHHHhh-----CCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHH
Q 012596 363 TITGLSGTGDIMLTCFVNLSRNRTVGVRLG-----SGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARI 437 (460)
Q Consensus 363 ~~~~~~~~gd~~~t~~s~~srn~~~g~~l~-----~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~l 437 (460)
++.++...+. ..+.... ..+..+. .|+... ...||+++++++|+++|+++|+++.+.++
T Consensus 229 ~~~~~~~~~~----~~s~~~~--~~~~~~l~~~~~~gf~~~----------~~~KDl~~~~~~a~~~g~~~p~~~~~~~~ 292 (320)
T 4dll_A 229 KVKEAITGGF----ADSRVLQ--LHGQRMVERDFAPRARLS----------IQLKDMRNALATAQEIGFDAPITGLFEQL 292 (320)
T ss_dssp HHHHHHTTST----TCBHHHH--THHHHHHTTCCCCSSBHH----------HHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHccc----ccCHHHH--HhhhhhccCCCCCcccHH----------HHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 8877532211 0000000 1122222 233332 24599999999999999999999999988
Q ss_pred Hh-------cCCCHHHHHHHHhc
Q 012596 438 ID-------NELTPKKAVLELMS 453 (460)
Q Consensus 438 l~-------~~~~~~~~~~~l~~ 453 (460)
+. +..+...+++.+..
T Consensus 293 ~~~a~~~g~g~~d~~~~~~~~~~ 315 (320)
T 4dll_A 293 YAEGVEHGLTDLDQSGLFVELAS 315 (320)
T ss_dssp HHHHHTTTTTTSBGGGHHHHHHH
T ss_pred HHHHHhcCCCCcCHHHHHHHHHH
Confidence 85 23445555665543
No 25
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.93 E-value=1.5e-25 Score=222.34 Aligned_cols=279 Identities=14% Similarity=0.114 Sum_probs=192.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
++|||+|||+|.||.+||..|+++| ++|++|||++++++.+.+.|.. ..+++++++++++|+||+
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g~~-------------~~~~~~~e~~~~aDvvi~ 70 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG--LSTWGADLNPQACANLLAEGAC-------------GAAASAREFAGVVDALVI 70 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTCS-------------EEESSSTTTTTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHcCCc-------------cccCCHHHHHhcCCEEEE
Confidence 3589999999999999999999999 9999999999999998886531 125678888899999999
Q ss_pred ccchh-cHHHHH---HHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEE
Q 012596 206 AMPVQ-FSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (460)
Q Consensus 206 aVp~~-~~~~vl---~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i 281 (460)
|||.. .++.++ +++.+.++++++||++++ ..+.+.+.+.+.+.+. | ..++..|...........+..++
T Consensus 71 ~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~~~ 143 (303)
T 3g0o_A 71 LVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSST-ISSADAQEIAAALTAL-N-----LNMLDAPVSGGAVKAAQGEMTVM 143 (303)
T ss_dssp CCSSHHHHHHHHC--CCCGGGSCTTCEEEECSC-CCHHHHHHHHHHHHTT-T-----CEEEECCEESCHHHHHTTCEEEE
T ss_pred ECCCHHHHHHHHhChhhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHc-C-----CeEEeCCCCCChhhhhcCCeEEE
Confidence 99975 688887 788889999999999986 5555444555555432 2 23444554443322223333455
Q ss_pred ccCCHHHHHHHHHHHhcCCceEEEcCC-hHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 012596 282 ASKDRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (460)
Q Consensus 282 ~~~d~~~~~~l~~lL~~~g~~v~~~~D-i~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~ 360 (460)
.+++.+.+++++++|+..|.++...++ ....+|.|++. |.+..+...+++|+..++++.|++
T Consensus 144 ~gg~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~-----------------N~~~~~~~~~~~Ea~~l~~~~G~d 206 (303)
T 3g0o_A 144 ASGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIH-----------------QLLAGVHIAAAAEAMALAARAGIP 206 (303)
T ss_dssp EECCHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eCCCHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 567899999999999998888777665 54455555444 445556678999999999999999
Q ss_pred ccccccccCCCceeeecccCCCccchHHHHhhCC-CChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHh
Q 012596 361 PATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSG-EKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (460)
Q Consensus 361 ~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g-~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~ 439 (460)
++++.++.+.+. +.+...++ .+..+..+ +... .....+.||+++++++|+++|+++|+++.+++++.
T Consensus 207 ~~~~~~~~~~~~----~~s~~~~~--~~~~~~~~~~~~~------~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~ 274 (303)
T 3g0o_A 207 LDVMYDVVTHAA----GNSWMFEN--RMQHVVDGDYTPR------SAVDIFVKDLGLVADTAKALRFPLPLASTALNMFT 274 (303)
T ss_dssp HHHHHHHHTTST----TCCHHHHH--HHHHHHTTCCCCS------SBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc----cCCHHHHh--hhHHHhcCCCCCC------CchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 998877532210 11111111 12222222 1100 12234569999999999999999999999999885
Q ss_pred -------cCCCHHHHHHHHhcCC
Q 012596 440 -------NELTPKKAVLELMSLP 455 (460)
Q Consensus 440 -------~~~~~~~~~~~l~~~~ 455 (460)
+..+...+++.+..++
T Consensus 275 ~a~~~g~g~~d~~~~~~~~~~~~ 297 (303)
T 3g0o_A 275 SASNAGYGKEDDSAVIKIFSGEG 297 (303)
T ss_dssp HHHHTTTTTSBGGGGGGGC----
T ss_pred HHHhcCCCccCHHHHHHHHHhcc
Confidence 2334444455444443
No 26
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.93 E-value=2.3e-26 Score=226.42 Aligned_cols=261 Identities=14% Similarity=0.115 Sum_probs=188.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
||||+|||+|.||..||..|+++| ++|++|||++++++.+.+.| +..+++++++++++|+||+|
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAG--FDVTVWNRNPAKCAPLVALG--------------ARQASSPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHT--CCEEEECSSGGGGHHHHHHT--------------CEECSCHHHHHHHCSEEEEC
T ss_pred CCeEEEEccCHHHHHHHHHHHHCC--CeEEEEcCCHHHHHHHHHCC--------------CeecCCHHHHHHcCCEEEEE
Confidence 479999999999999999999999 99999999999988888765 34567899988999999999
Q ss_pred cchh-cHHHHH---HHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012596 207 MPVQ-FSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (460)
Q Consensus 207 Vp~~-~~~~vl---~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~ 282 (460)
||.. .+++++ +++.+.+++++++|++++ ..+.+.+.+.+.+.+. | ..++.+|...........+..++.
T Consensus 65 v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~~~~ 137 (287)
T 3pdu_A 65 LADPAAAREVCFGANGVLEGIGGGRGYIDMST-VDDETSTAIGAAVTAR-G-----GRFLEAPVSGTKKPAEDGTLIILA 137 (287)
T ss_dssp CSSHHHHHHHHHSTTCGGGTCCTTCEEEECSC-CCHHHHHHHHHHHHHT-T-----CEEEECCEECCHHHHHHTCEEEEE
T ss_pred cCCHHHHHHHHcCchhhhhcccCCCEEEECCC-CCHHHHHHHHHHHHHc-C-----CEEEECCccCCHHHHhcCCEEEEE
Confidence 9975 788888 788888989999999886 4555445555555543 3 234555554433222222334555
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012596 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (460)
Q Consensus 283 ~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~ 362 (460)
+++.+.+++++++|+..|.++...++.....+.|+ .+|.+......+++|+..++++.|++++
T Consensus 138 gg~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl-----------------~~N~~~~~~~~~~~Ea~~l~~~~G~~~~ 200 (287)
T 3pdu_A 138 AGDQSLFTDAGPAFAALGKKCLHLGEVGQGARMKL-----------------VVNMIMGQMMTALGEGMALGRNCGLDGG 200 (287)
T ss_dssp EECHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEcCCCChHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 66889999999999999888888777544445444 4455566777899999999999999999
Q ss_pred ccccccCCCceeeecccCCCccchHHHHhhCC-CChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHh
Q 012596 363 TITGLSGTGDIMLTCFVNLSRNRTVGVRLGSG-EKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (460)
Q Consensus 363 ~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g-~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~ 439 (460)
++.++.+.+. +.+...++ .+..+.++ ... .....++.||+++++++|+++|+++|+++.+++++.
T Consensus 201 ~~~~~~~~~~----~~s~~~~~--~~~~~~~~~~~~------~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~ 266 (287)
T 3pdu_A 201 QLLEVLDAGA----MANPMFKG--KGQMLLSGEFPT------SFPLKHMQKDLRLAVELGDRLGQPLHGAATANESFK 266 (287)
T ss_dssp HHHHHHHHST----TCCHHHHH--HHHHHHHTCCCC------SSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhcc----ccChHHHh--hccccccCCCCC------CCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 8877532111 11111111 12223221 100 012234569999999999999999999999998885
No 27
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.93 E-value=8.2e-25 Score=216.62 Aligned_cols=278 Identities=14% Similarity=0.144 Sum_probs=193.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+||||+|||+|.||..||..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~d~~~~~~~~~~~~g--------------~~~~~~~~~~~~~aDvvi~ 65 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAG--YLLNVFDLVQSAVDGLVAAG--------------ASAARSARDAVQGADVVIS 65 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTT--------------CEECSSHHHHHTTCSEEEE
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHHCC--------------CeEcCCHHHHHhCCCeEEE
Confidence 4689999999999999999999999 99999999999999888764 3456788898999999999
Q ss_pred ccc-hhcHHHHHH---HhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEE
Q 012596 206 AMP-VQFSSSFLE---GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (460)
Q Consensus 206 aVp-~~~~~~vl~---~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i 281 (460)
||| ...+++++. ++.+.++++++||++++ ..+.+.+.+.+.+.+. |. .++..|...............+
T Consensus 66 ~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st-~~~~~~~~l~~~~~~~-g~-----~~~~~pv~~~~~~~~~g~l~~~ 138 (302)
T 2h78_A 66 MLPASQHVEGLYLDDDGLLAHIAPGTLVLECST-IAPTSARKIHAAARER-GL-----AMLDAPVSGGTAGAAAGTLTFM 138 (302)
T ss_dssp CCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSC-CCHHHHHHHHHHHHHT-TC-----CEEECCEESCHHHHHHTCEEEE
T ss_pred ECCCHHHHHHHHcCchhHHhcCCCCcEEEECCC-CCHHHHHHHHHHHHHc-CC-----EEEEEEccCChhhHhcCCceEE
Confidence 998 557899998 88898999999999886 4444434455555442 32 2344454443322211223344
Q ss_pred ccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 012596 282 ASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKP 361 (460)
Q Consensus 282 ~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~ 361 (460)
.+++.+.+++++++|+..|.+++..++.....|.|++.|. +......+++|+..++++.|+++
T Consensus 139 ~~g~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~-----------------~~~~~~~~~~Ea~~l~~~~G~~~ 201 (302)
T 2h78_A 139 VGGDAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQ-----------------LLAVLMIGTAEAMALGVANGLEA 201 (302)
T ss_dssp EESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHTTCCH
T ss_pred eCCCHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHcCCCH
Confidence 5568899999999999999888877776666677666654 34456778999999999999999
Q ss_pred ccccccc--CCCce-eeecccC---CCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHH
Q 012596 362 ATITGLS--GTGDI-MLTCFVN---LSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVA 435 (460)
Q Consensus 362 ~~~~~~~--~~gd~-~~t~~s~---~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~ 435 (460)
+++.++. +.+.. ....+.+ ...++....+...|++.+. ..||+++++++|+++|+++|+++.++
T Consensus 202 ~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~----------~~kD~~~~~~~a~~~g~~~p~~~~~~ 271 (302)
T 2h78_A 202 KVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQL----------MAKDLGLAQEAAQASASSTPMGSLAL 271 (302)
T ss_dssp HHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHH----------HHHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCCCCcHHH----------HHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 8876642 11110 0000110 0000001112223444432 34899999999999999999999999
Q ss_pred HHHhc-------CCCHHHHHHHHhc
Q 012596 436 RIIDN-------ELTPKKAVLELMS 453 (460)
Q Consensus 436 ~ll~~-------~~~~~~~~~~l~~ 453 (460)
++++. ..+...+++.+..
T Consensus 272 ~~~~~a~~~g~g~~d~~~~~~~~~~ 296 (302)
T 2h78_A 272 SLYRLLLKQGYAERDFSVVQKLFDP 296 (302)
T ss_dssp HHHHHHHHTTCTTSBGGGGHHHHCT
T ss_pred HHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 98852 3444555555543
No 28
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.93 E-value=1.8e-25 Score=219.89 Aligned_cols=261 Identities=14% Similarity=0.115 Sum_probs=188.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEcc
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (460)
|||+|||+|.||..+|..|+++| ++|++|||++++++.+.+.| +..+++++++++++|+||+||
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG--CSVTIWNRSPEKAEELAALG--------------AERAATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSGGGGHHHHHTT--------------CEECSSHHHHHHHCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC--CeEEEEcCCHHHHHHHHHCC--------------CeecCCHHHHHhcCCEEEEEc
Confidence 79999999999999999999999 99999999999988888754 356678999889999999999
Q ss_pred c-hhcHHHHH---HHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012596 208 P-VQFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (460)
Q Consensus 208 p-~~~~~~vl---~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~ 283 (460)
| ...+++++ +++.+.+++++++|++++ +.+.+.+.+.+.+.+. |. .++..|...........+..++.+
T Consensus 66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~st-~~~~~~~~~~~~~~~~-g~-----~~~~~pv~g~~~~a~~g~l~~~~g 138 (287)
T 3pef_A 66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDMST-VDPATSQRIGVAVVAK-GG-----RFLEAPVSGSKKPAEDGTLIILAA 138 (287)
T ss_dssp SSHHHHHHHHHSTTCHHHHCCTTCEEEECSC-CCHHHHHHHHHHHHHT-TC-----EEEECCEECCHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHcCcchHhhcCCCCCEEEeCCC-CCHHHHHHHHHHHHHh-CC-----EEEECCCcCCHHHHhcCCEEEEEe
Confidence 9 56788988 888888999999999864 6666555566666543 32 233344433221111123334555
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012596 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (460)
Q Consensus 284 ~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~~ 363 (460)
++.+.+++++++|+..|.+++..++....++.|++. |.+......+++|+..++++.|+++++
T Consensus 139 g~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl~~-----------------N~~~~~~~~~~~E~~~l~~~~G~d~~~ 201 (287)
T 3pef_A 139 GDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVV-----------------NMVMGGMMACFCEGLALGEKAGLATDA 201 (287)
T ss_dssp ECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 688999999999999998888887765555555444 445556678899999999999999998
Q ss_pred cccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHh
Q 012596 364 ITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (460)
Q Consensus 364 ~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~ 439 (460)
+.++.+.+. +.+...++ .+..+.++.... ......+.||+++++++|+++|+++|+++.++++++
T Consensus 202 ~~~~~~~~~----~~s~~~~~--~~~~~~~~~~~~-----~~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~ 266 (287)
T 3pef_A 202 ILDVIGAGA----MANPMFAL--KGGLIRDRNFAP-----AFPLKHMQKDLRLAVALGDRVGQPLVASAAANELFK 266 (287)
T ss_dssp HHHHHHHST----TCCHHHHH--HHHHHHTTCCCC-----SSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHhcc----cccHHHHH--HhhhhhcCCCCC-----CCchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 877532111 11111111 233333321000 012234569999999999999999999999999885
No 29
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.92 E-value=4.9e-24 Score=210.38 Aligned_cols=259 Identities=19% Similarity=0.208 Sum_probs=182.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
+|||+|||+|.||..++..|++.| ++|++|+|++++++.+.+.| +..+++++++++++|+||+|
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~D~vi~~ 68 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAG--YSLVVSDRNPEAIADVIAAG--------------AETASTAKAIAEQCDVIITM 68 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTT--------------CEECSSHHHHHHHCSEEEEC
T ss_pred cceEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHCC--------------CeecCCHHHHHhCCCEEEEE
Confidence 379999999999999999999998 89999999999888887754 24556788888899999999
Q ss_pred cc-hhcHHHHH---HHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012596 207 MP-VQFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (460)
Q Consensus 207 Vp-~~~~~~vl---~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~ 282 (460)
+| ...++.++ +++.+.++++++||++++|... +.+.+.+.+.+. | ..++..|..............++.
T Consensus 69 v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~-~~~~l~~~~~~~-g-----~~~~~~pv~~~~~~~~~~~~~~~~ 141 (299)
T 1vpd_A 69 LPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPL-ASREISDALKAK-G-----VEMLDAPVSGGEPKAIDGTLSVMV 141 (299)
T ss_dssp CSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHH-HHHHHHHHHHTT-T-----CEEEECCEESHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHH-HHHHHHHHHHHc-C-----CeEEEecCCCCHhHHhcCCEEEEe
Confidence 99 56688888 6788888899999999987642 223444444332 2 234445554332211111223444
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012596 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (460)
Q Consensus 283 ~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~ 362 (460)
+++.+.++.++++|+..|.++++.++.....|.|++.| ....++..++.|+..++++.|++++
T Consensus 142 ~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n-----------------~~~~~~~~~~~Ea~~l~~~~G~~~~ 204 (299)
T 1vpd_A 142 GGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQ-----------------VIVALNIAAMSEALTLATKAGVNPD 204 (299)
T ss_dssp ESCHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 55888999999999999999888877666666665444 4566778999999999999999998
Q ss_pred ccccccCCCceeeecccCCCccc--hHHH-HhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHh
Q 012596 363 TITGLSGTGDIMLTCFVNLSRNR--TVGV-RLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (460)
Q Consensus 363 ~~~~~~~~gd~~~t~~s~~srn~--~~g~-~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~ 439 (460)
++.++...+... +.. ..++ ++.. +...|+.++. ..||++.++++|+++|+++|+++.++++++
T Consensus 205 ~~~~~~~~~~~~--s~~--~~~~~~~~l~~~~~~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~ 270 (299)
T 1vpd_A 205 LVYQAIRGGLAG--STV--LDAKAPMVMDRNFKPGFRIDL----------HIKDLANALDTSHGVGAQLPLTAAVMEMMQ 270 (299)
T ss_dssp HHHHHHTTSTTC--CHH--HHHHHHHHHTTCCCCSSBHHH----------HHHHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHccCCC--CHH--HHHhhhHhhcCCCCCCCChHH----------HHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 877653222100 000 0000 0100 0112333332 237899999999999999999999999886
No 30
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.92 E-value=1.1e-23 Score=207.90 Aligned_cols=260 Identities=15% Similarity=0.207 Sum_probs=183.3
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
|+++|||+|||+|.||..++..|++.| ++|++|+|++++++.+.+.| +..+++++++++++|+|
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~D~v 64 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEG--VTVYAFDLMEANVAAVVAQG--------------AQACENNQKVAAASDII 64 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHTTT--------------CEECSSHHHHHHHCSEE
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHCC--------------CeecCCHHHHHhCCCEE
Confidence 445689999999999999999999998 89999999999888887653 24556788888899999
Q ss_pred EEccc-hhcHHHHHH---HhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEE
Q 012596 204 LHAMP-VQFSSSFLE---GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAM 279 (460)
Q Consensus 204 ilaVp-~~~~~~vl~---~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i 279 (460)
|+|+| ..+++.++. ++.+.++++++||++++|... +.+.+.+.+.+. + ..++..|..............
T Consensus 65 i~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~-~~~~l~~~~~~~-g-----~~~~~~p~~~~~~~a~~g~~~ 137 (301)
T 3cky_A 65 FTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPS-STLKMAKVAAEK-G-----IDYVDAPVSGGTKGAEAGTLT 137 (301)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHH-HHHHHHHHHHHT-T-----CEEEECCEESHHHHHHHTCEE
T ss_pred EEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHH-HHHHHHHHHHHc-C-----CeEEEccCCCCHHHHHcCCeE
Confidence 99997 456888885 788888899999999987632 223444554432 2 223345554433211112222
Q ss_pred EEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 012596 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGA 359 (460)
Q Consensus 280 ~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi 359 (460)
++.+++.+.++.++++|+..|.++++.++.....|.|++.| ....++..++.|+..++++.|+
T Consensus 138 ~~~~g~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N-----------------~~~~~~~~~~~Ea~~l~~~~G~ 200 (301)
T 3cky_A 138 IMVGASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNN-----------------LLLGCNMASLAEALVLGVKCGL 200 (301)
T ss_dssp EEEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEECCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHcCC
Confidence 33445888999999999999988877666555556665444 4566677899999999999999
Q ss_pred CccccccccC---CCceee--ecc-cCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHH
Q 012596 360 KPATITGLSG---TGDIML--TCF-VNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTA 433 (460)
Q Consensus 360 ~~~~~~~~~~---~gd~~~--t~~-s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~ 433 (460)
+++++.++.. .++... .+. +...++++ .|+.++. ..||++.++++++++|+++|+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~ 264 (301)
T 3cky_A 201 KPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFA------GGFAMDL----------QHKDLGLALEAGKEGNVPLPMTAM 264 (301)
T ss_dssp CHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCS------SSSBHHH----------HHHHHHHHHHHHHHHTCCCHHHHH
T ss_pred CHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCC------CCccHHH----------HHHHHHHHHHHHHHhCCCChHHHH
Confidence 9887765421 111111 122 23333332 2334432 247899999999999999999999
Q ss_pred HHHHHh
Q 012596 434 VARIID 439 (460)
Q Consensus 434 v~~ll~ 439 (460)
++++++
T Consensus 265 ~~~~~~ 270 (301)
T 3cky_A 265 ATQIFE 270 (301)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999886
No 31
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.92 E-value=2.4e-24 Score=212.24 Aligned_cols=262 Identities=13% Similarity=0.117 Sum_probs=181.5
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEcc
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (460)
|||+|||+|.||.++|..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||+|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG--YPLIIYDVFPDACKEFQDAG--------------EQVVSSPADVAEKADRIITML 64 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT--CCEEEECSSTHHHHHHHTTT--------------CEECSSHHHHHHHCSEEEECC
T ss_pred CeEEEEeccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcC--------------CeecCCHHHHHhcCCEEEEeC
Confidence 68999999999999999999999 89999999999888887654 345568888888999999999
Q ss_pred c-hhcHHHHHHHh---hhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012596 208 P-VQFSSSFLEGI---SDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (460)
Q Consensus 208 p-~~~~~~vl~~i---~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~ 283 (460)
| +..++.++.++ .+.+++++++|+ .+|+.+++.+.+.+.+.+. +. .+...|........+.....++.+
T Consensus 65 p~~~~~~~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~-g~-----~~~~~p~~~g~~~a~~~~~~~~~~ 137 (296)
T 2gf2_A 65 PTSINAIEAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM-GA-----VFMDAPVSGGVGAARSGNLTFMVG 137 (296)
T ss_dssp SSHHHHHHHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT-TC-----EEEECCEESHHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc-CC-----EEEEcCCCCChhHHhcCcEEEEeC
Confidence 6 56788888764 456788999999 6788887555555555442 21 233445443322122222334445
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012596 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (460)
Q Consensus 284 ~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~~ 363 (460)
.+.+.++.++++|+..|..++...+.. .+...|+.+|.+..+...++.|+..++++.|+++++
T Consensus 138 ~~~~~~~~v~~l~~~~g~~~~~~~~~g-----------------~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~ 200 (296)
T 2gf2_A 138 GVEDEFAAAQELLGCMGSNVVYCGAVG-----------------TGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKL 200 (296)
T ss_dssp SCGGGHHHHHHHHTTTEEEEEEEESTT-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCcc-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 678889999999999998877655421 222334455666677788999999999999999887
Q ss_pred cccccCCCc---eeeecccCC---CccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHH
Q 012596 364 ITGLSGTGD---IMLTCFVNL---SRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARI 437 (460)
Q Consensus 364 ~~~~~~~gd---~~~t~~s~~---srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~l 437 (460)
+.++...++ .+..+.... .+....+.+...|++.+. ..||+++++++|+++|+++|+++.++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~~~~~ 270 (296)
T 2gf2_A 201 LAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTL----------MAKDLGLAQDSATSTKSPILLGSLAHQI 270 (296)
T ss_dssp HHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBHHH----------HHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCchHH----------HHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 766422111 111111100 000011223333444432 3489999999999999999999999999
Q ss_pred Hh
Q 012596 438 ID 439 (460)
Q Consensus 438 l~ 439 (460)
++
T Consensus 271 ~~ 272 (296)
T 2gf2_A 271 YR 272 (296)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 32
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.92 E-value=1.3e-24 Score=217.28 Aligned_cols=248 Identities=14% Similarity=0.117 Sum_probs=173.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-------HHHHHHHhhcCCCccCCCCCCCCceEEeC-CHHhhcC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------AVCQSINEKHCNCRYFPEQKLPENVIATT-DAKTALL 198 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~-------~~~~~l~~~g~~~~~~~~~~l~~~i~a~~-~~~ea~~ 198 (460)
+|||+|||+|.||.++|..|+++|. ++|++|||++ +..+.+.+.| + ++ ++.++++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~-~~V~~~dr~~~~~~~~~~~~~~~~~~g--------------~--~~~s~~e~~~ 86 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNA-ARLAAYDLRFNDPAASGALRARAAELG--------------V--EPLDDVAGIA 86 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-SEEEEECGGGGCTTTHHHHHHHHHHTT--------------C--EEESSGGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCC-CeEEEEeCCCccccchHHHHHHHHHCC--------------C--CCCCHHHHHh
Confidence 5899999999999999999999872 6999999997 4555555433 2 34 6778889
Q ss_pred CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeE
Q 012596 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTA 278 (460)
Q Consensus 199 ~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~ 278 (460)
+||+||+|||.....++++++.+.++++++||+++ ++.+.+.+.+.+.+.+. |..+.. +.+.||..+. .+..+
T Consensus 87 ~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~~-g~~~~d-~pv~g~~~a~---~g~l~- 159 (317)
T 4ezb_A 87 CADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIATG-KGSFVE-GAVMARVPPY---AEKVP- 159 (317)
T ss_dssp GCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHTS-SCEEEE-EEECSCSTTT---GGGSE-
T ss_pred cCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHHc-CCeEEe-ccCCCCchhh---cCCEE-
Confidence 99999999999887778899999999999999988 47776666666666543 322122 2455665432 34433
Q ss_pred EEEccCCHHHHHHHHHHHhcCCceEEEcCC-hHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHc
Q 012596 279 MVVASKDRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKM 357 (460)
Q Consensus 279 i~i~~~d~~~~~~l~~lL~~~g~~v~~~~D-i~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~ 357 (460)
+++++.+ + ++++++|+..|.++...++ +...++. |+.+|.+.....++++|+..++++.
T Consensus 160 i~vgg~~-~--~~~~~ll~~~g~~v~~~g~~~g~a~~~-----------------Kl~~N~~~~~~~~~~~E~~~la~~~ 219 (317)
T 4ezb_A 160 ILVAGRR-A--VEVAERLNALGMNLEAVGETPGQASSL-----------------KMIRSVMIKGVEALLIEALSSAERA 219 (317)
T ss_dssp EEEESTT-H--HHHHHHHHTTTCEEEEEESSTTHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCh-H--HHHHHHHHHhCCCeEEeCCCcCHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4555544 3 8999999999988887776 5444444 4455666677788999999999999
Q ss_pred CCCccccccccC-C-C-ceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHH
Q 012596 358 GAKPATITGLSG-T-G-DIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAV 434 (460)
Q Consensus 358 Gi~~~~~~~~~~-~-g-d~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v 434 (460)
|++++.+..+.+ . + +....+....++++..|+. ..||+++++++|+++|+++|+.+.+
T Consensus 220 Gid~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~-------------------~~KDl~~~~~~a~~~g~~~pl~~~~ 280 (317)
T 4ezb_A 220 GVTERILDSVQETFPGLDWRDVADYYLSRTFEHGAR-------------------RVTEMTEAAETIESFGLNAPMSRAA 280 (317)
T ss_dssp TCHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred CCCHHHHHHHHhcCccccHHHhhhhhhcCCCCCCcc-------------------hHHHHHHHHHHHHHcCCCChHHHHH
Confidence 999964433311 1 1 0000000001111111111 1489999999999999999999999
Q ss_pred HHH
Q 012596 435 ARI 437 (460)
Q Consensus 435 ~~l 437 (460)
+++
T Consensus 281 ~~~ 283 (317)
T 4ezb_A 281 CET 283 (317)
T ss_dssp HHH
T ss_pred HHH
Confidence 998
No 33
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.92 E-value=5.8e-24 Score=221.48 Aligned_cols=285 Identities=18% Similarity=0.153 Sum_probs=209.3
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--C-----CCceEEeCCHHhhcCCC
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L-----PENVIATTDAKTALLGA 200 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~--l-----~~~i~a~~~~~ea~~~a 200 (460)
|||+|||+|+||.++|..|+++| ++|++||+++++++.+++.+ ...+.++.. + ...+.+++++++++++|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G--~~V~~~d~~~~~~~~l~~~~-~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~a 77 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG--HEVIGVDVSSTKIDLINQGK-SPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDS 77 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHhCCC-CCcCCCCHHHHHHhhcccCceEEeCCHHHHhccC
Confidence 68999999999999999999999 99999999999999988754 223333221 0 22477888998888999
Q ss_pred cEEEEccchhc----------HHHHHHHhhhcCCC---CCeEEEeccCCccch-hhhHHHHHHHHhCCCC-CCEEEEECc
Q 012596 201 DYCLHAMPVQF----------SSSFLEGISDYVDP---GLPFISLSKGLELNT-LRMMSQIIPQALRNPR-QPFIALSGP 265 (460)
Q Consensus 201 DiVilaVp~~~----------~~~vl~~i~~~l~~---~~iIV~~~~Gi~~~~-~~~l~e~l~~~lg~~~-~~~~v~~gP 265 (460)
|+||+|||... +.+++++|.+.+++ +++||..+ ++.+.+ .+.+.+.+.+..+... ..+.+..+|
T Consensus 78 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S-tv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~P 156 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS-TVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNP 156 (436)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS-CCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECC
T ss_pred CEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC-CcCCCchHHHHHHHHHHhcCcccCCcEEEEECc
Confidence 99999999765 89999999998888 89998876 466665 5667777766544321 346678888
Q ss_pred ccHHHHh----ccCCeEEEEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHH
Q 012596 266 SFALELM----NKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (460)
Q Consensus 266 ~~a~e~~----~g~~~~i~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~a 341 (460)
.+..+.. ...+..+++++.+.+..+.++++|+..+..+.. .|+...+|.|++.|. +.+
T Consensus 157 e~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~N~-----------------~~a 218 (436)
T 1mv8_A 157 EFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIR-KTVEVAEMIKYTCNV-----------------WHA 218 (436)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSCEEE-EEHHHHHHHHHHHHH-----------------HHH
T ss_pred ccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCCEEc-CCHHHHHHHHHHHHH-----------------HHH
Confidence 8765321 123334567766688889999999998887766 788888888776654 455
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHH
Q 012596 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALA 421 (460)
Q Consensus 342 l~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA 421 (460)
+..++++|+..+|++.|++++++.+..+....+. ..++++..|..+ .|.+. .||.++++++|
T Consensus 219 ~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~r~~----~~~~~~~pg~g~-gg~~~-------------~kD~~~l~~~a 280 (436)
T 1mv8_A 219 AKVTFANEIGNIAKAVGVDGREVMDVICQDHKLN----LSRYYMRPGFAF-GGSCL-------------PKDVRALTYRA 280 (436)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTTTT----TSSTTCSCCSCC-CSSSH-------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCC----CcccCCCCcccc-cCcCc-------------HhhHHHHHHHH
Confidence 6678999999999999999887776543311010 001222222211 12232 27899999999
Q ss_pred HHcCCCChHHHHHHHHHhcCCCHHHHHHHHhcC
Q 012596 422 QKYNVKMPVLTAVARIIDNELTPKKAVLELMSL 454 (460)
Q Consensus 422 ~~~gv~~P~~~~v~~ll~~~~~~~~~~~~l~~~ 454 (460)
+++|+++|++++++++ ++..+..+++.++.+
T Consensus 281 ~~~g~~~pl~~~v~~i--n~~~~~~~~~~~~~~ 311 (436)
T 1mv8_A 281 SQLDVEHPMLGSLMRS--NSNQVQKAFDLITSH 311 (436)
T ss_dssp HHTTCCCTTGGGHHHH--HHHHHHHHHHHHTTS
T ss_pred HHcCCCcHHHHHHHHH--HhHhHHHHHHHHHHh
Confidence 9999999999999998 566788888888765
No 34
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.91 E-value=3e-24 Score=214.13 Aligned_cols=255 Identities=13% Similarity=0.080 Sum_probs=175.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCC--HHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD--PAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~--~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
.+|||+|||+|.||.+||..|+++| + +|++|||+ ++..+.+.+.| +..++++.++++++|+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G--~~~V~~~dr~~~~~~~~~~~~~g--------------~~~~~~~~e~~~~aDv 86 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAG--AIDMAAYDAASAESWRPRAEELG--------------VSCKASVAEVAGECDV 86 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHS--CCEEEEECSSCHHHHHHHHHHTT--------------CEECSCHHHHHHHCSE
T ss_pred CCCEEEEECccHHHHHHHHHHHHCC--CCeEEEEcCCCCHHHHHHHHHCC--------------CEEeCCHHHHHhcCCE
Confidence 3689999999999999999999999 8 99999997 56777777654 3456788888899999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHh-CCCCCCEEEEECcccHHHHhccCCeEEEE
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQAL-RNPRQPFIALSGPSFALELMNKLPTAMVV 281 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~l-g~~~~~~~v~~gP~~a~e~~~g~~~~i~i 281 (460)
||+|||.....++++++.+.++++++||++++ +.+.+.+.+.+.+.+.. |..+... .+.||..+. .+.. .+++
T Consensus 87 Vi~~vp~~~~~~~~~~l~~~l~~~~ivvd~st-~~~~~~~~~~~~~~~~~~g~~~vd~-pv~g~~~~~---~g~l-~i~v 160 (312)
T 3qsg_A 87 IFSLVTAQAALEVAQQAGPHLCEGALYADFTS-CSPAVKRAIGDVISRHRPSAQYAAV-AVMSAVKPH---GHRV-PLVV 160 (312)
T ss_dssp EEECSCTTTHHHHHHHHGGGCCTTCEEEECCC-CCHHHHHHHHHHHHHHCTTCEEEEE-EECSCSTTT---GGGS-EEEE
T ss_pred EEEecCchhHHHHHHhhHhhcCCCCEEEEcCC-CCHHHHHHHHHHHHhhcCCCeEEec-cccCCchhh---cCCE-EEEe
Confidence 99999999888888999999999999999885 66666566666665542 3222222 234443322 3333 3445
Q ss_pred ccCCHHHHHHHHHHHhcCCceEEEcCC-hHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 012596 282 ASKDRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (460)
Q Consensus 282 ~~~d~~~~~~l~~lL~~~g~~v~~~~D-i~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~ 360 (460)
++.+ + ++++++|+..|.++.+.++ +...++.|.+ +|.+......++.|++.++++.|++
T Consensus 161 gg~~-~--~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~-----------------~n~~~~~~~~~~~Ea~~la~~~Gld 220 (312)
T 3qsg_A 161 DGDG-A--RRFQAAFTLYGCRIEVLDGEVGGAALLKMC-----------------RSAVLKGLEALFLEALAAAEKMGLA 220 (312)
T ss_dssp ESTT-H--HHHHHHHHTTTCEEEECCSSTTHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHTTTCH
T ss_pred cCCh-H--HHHHHHHHHhCCCeEEcCCCCCHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 5444 3 8999999999999888776 5444454443 4555566678899999999999999
Q ss_pred ccccccccCCCceeeecccCCCccc-hHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHh
Q 012596 361 PATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (460)
Q Consensus 361 ~~~~~~~~~~gd~~~t~~s~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~ 439 (460)
++ +.+.... ... ++.+ ..+..+..+ +.... .. ..||+++++++++++|+++|+.+.+.++++
T Consensus 221 ~~-~~~~l~~------~~~--~~~~~~~~~~~~~~----~~~~g-~~---~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~ 283 (312)
T 3qsg_A 221 DR-VLASLDA------SFP--EHHLRDLALYLVER----NLEHA-DR---RAHELGEVAATLCSVGVEPLVAEAGYRRLT 283 (312)
T ss_dssp HH-HHHHHHH------HSG--GGTHHHHHHHHHHH----HHHHH-HH---HHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HH-HHHHHHh------cCC--chhHHHhhhHhhcC----CCCcc-cc---hHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 84 5442100 000 1111 011111110 00000 00 148999999999999999999999998875
No 35
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.91 E-value=8.4e-24 Score=210.67 Aligned_cols=260 Identities=14% Similarity=0.140 Sum_probs=180.7
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
++.+|||+|||+|.||..+|..|++.| ++|++|+|++++++.+.+.|. ..+.++.++++++|+|
T Consensus 27 ~~~~~~I~iIG~G~mG~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~DvV 90 (316)
T 2uyy_A 27 TPTDKKIGFLGLGLMGSGIVSNLLKMG--HTVTVWNRTAEKCDLFIQEGA--------------RLGRTPAEVVSTCDIT 90 (316)
T ss_dssp CCCSSCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSGGGGHHHHHTTC--------------EECSCHHHHHHHCSEE
T ss_pred CCCCCeEEEEcccHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHcCC--------------EEcCCHHHHHhcCCEE
Confidence 334589999999999999999999998 899999999988888776542 3456787888899999
Q ss_pred EEccc-hhcHHHHHHHh---hhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHH--HhccCCe
Q 012596 204 LHAMP-VQFSSSFLEGI---SDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE--LMNKLPT 277 (460)
Q Consensus 204 ilaVp-~~~~~~vl~~i---~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e--~~~g~~~ 277 (460)
|+|+| ...+++++.++ .+.++++++||+++++ .+.+.+.+.+.+.+. + ..++.+|..... ...+. .
T Consensus 91 i~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~-~~~~~~~l~~~~~~~-~-----~~~v~~p~~g~~~~~~~g~-~ 162 (316)
T 2uyy_A 91 FACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTV-DADTVTELAQVIVSR-G-----GRFLEAPVSGNQQLSNDGM-L 162 (316)
T ss_dssp EECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCC-CHHHHHHHHHHHHHT-T-----CEEEECCEESCHHHHHHTC-E
T ss_pred EEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCC-CHHHHHHHHHHHHHc-C-----CEEEEcCccCChhHHhhCC-E
Confidence 99999 67888888764 4778889999999874 333333444444331 2 235555554322 22332 2
Q ss_pred EEEEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHc
Q 012596 278 AMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKM 357 (460)
Q Consensus 278 ~i~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~ 357 (460)
.++++ ++.+.+++++++|+..|..++..+++....|.|.+.|.+. .....++.|+..++++.
T Consensus 163 ~~~~~-g~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~-----------------~~~~~~~~Ea~~la~~~ 224 (316)
T 2uyy_A 163 VILAA-GDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQ-----------------GSFMATIAEGLTLAQVT 224 (316)
T ss_dssp EEEEE-ECHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHT
T ss_pred EEEeC-CCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHc
Confidence 23334 4788899999999999999888877666667766665432 22567899999999999
Q ss_pred CCCccccccccCCCceeeecccCCCccc--hHH-HHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHH
Q 012596 358 GAKPATITGLSGTGDIMLTCFVNLSRNR--TVG-VRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAV 434 (460)
Q Consensus 358 Gi~~~~~~~~~~~gd~~~t~~s~~srn~--~~g-~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v 434 (460)
|++++++.++...+... +...... ++. .+...|++++. ..||+++++++++++|+++|+++.+
T Consensus 225 G~~~~~~~~~~~~~~~~----s~~~~~~~~~~l~~~~~~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~v 290 (316)
T 2uyy_A 225 GQSQQTLLDILNQGQLA----SIFLDQKCQNILQGNFKPDFYLKY----------IQKDLRLAIALGDAVNHPTPMAAAA 290 (316)
T ss_dssp TCCHHHHHHHHHHSTTC----CHHHHHHHHHHHHTCCCCSSBHHH----------HHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred CCCHHHHHHHHHcCCCC----CHHHHHhhHHhhcCCCCCCCcHHH----------HHHHHHHHHHHHHHhCCCChHHHHH
Confidence 99988776542111100 0000000 010 01122334432 2589999999999999999999999
Q ss_pred HHHHh
Q 012596 435 ARIID 439 (460)
Q Consensus 435 ~~ll~ 439 (460)
+++++
T Consensus 291 ~~~~~ 295 (316)
T 2uyy_A 291 NEVYK 295 (316)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99886
No 36
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.91 E-value=3e-24 Score=225.85 Aligned_cols=282 Identities=12% Similarity=0.097 Sum_probs=192.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC---CcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG---ADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~---aDi 202 (460)
..++|+|||+|.||++||.+|+++| ++|++|+|++++++.+.+... + .++..++++++++++ +|+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G--~~V~v~~r~~~~~~~l~~~~~------~----~gi~~~~s~~e~v~~l~~aDv 81 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRG--YTVSIFNRSREKTEEVIAENP------G----KKLVPYYTVKEFVESLETPRR 81 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTT--CCEEEECSSHHHHHHHHHHST------T----SCEEECSSHHHHHHTBCSSCE
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHhhCC------C----CCeEEeCCHHHHHhCCCCCCE
Confidence 4579999999999999999999999 899999999999998877521 0 135677788888776 999
Q ss_pred EEEccch-hcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH--hccCCeEE
Q 012596 203 CLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL--MNKLPTAM 279 (460)
Q Consensus 203 VilaVp~-~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~--~~g~~~~i 279 (460)
||+|||+ ..++++++++.+.++++++||+++||....+ ..+.+.+.+. |. .++.+|....+. ..|. .+
T Consensus 82 Vil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t-~~l~~~l~~~-g~-----~~v~~pv~gg~~~a~~g~--~i 152 (480)
T 2zyd_A 82 ILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDT-IRRNRELSAE-GF-----NFIGTGVSGGEEGALKGP--SI 152 (480)
T ss_dssp EEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HHHHHHHHHT-TC-----EEEEEEEESHHHHHHHCC--EE
T ss_pred EEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHH-HHHHHHHHHC-CC-----CeeCCccccCHhHHhcCC--eE
Confidence 9999998 5799999999999999999999999876543 2344555442 32 233444433322 2333 34
Q ss_pred EEccCCHHHHHHHHHHHhcCCce-------EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHH
Q 012596 280 VVASKDRKLANAVQQLLASKHLR-------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRW 352 (460)
Q Consensus 280 ~i~~~d~~~~~~l~~lL~~~g~~-------v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~ 352 (460)
+. +++.+.++.++++|+..+.+ +.+.++. |.+..+|+++|.+..+..+++.|+..
T Consensus 153 ~~-gg~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~-----------------G~g~~~Kl~~N~~~~~~~~~laEa~~ 214 (480)
T 2zyd_A 153 MP-GGQKEAYELVAPILTKIAAVAEDGEPCVTYIGAD-----------------GAGHYVKMVHNGIEYGDMQLIAEAYS 214 (480)
T ss_dssp EE-ESCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBST-----------------THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Ee-cCCHHHHHHHHHHHHHHhccccCCCceEEEECCc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 45789999999999987765 4444432 33444556677777888999999999
Q ss_pred HHHH-cCCCcccccccc-----C-CCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHH-HHHHHHHHc
Q 012596 353 LATK-MGAKPATITGLS-----G-TGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAG-AVIALAQKY 424 (460)
Q Consensus 353 la~a-~Gi~~~~~~~~~-----~-~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g-~vv~lA~~~ 424 (460)
++++ +|++++++.++. + +++.+.++++...+++. ...+..++.+.+.. +.|+.+ .++++|+++
T Consensus 215 l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d----~~~~~~v~~i~D~~-----~~k~tG~~~~~~A~~~ 285 (480)
T 2zyd_A 215 LLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKD----EDGNYLVDVILDEA-----ANKGTGKWTSQSALDL 285 (480)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBC----TTSSBGGGGBCCCC-----CCCSCTTHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCC----CCCcchHHHHHHHh-----cCchHHHHHHHHHHHc
Confidence 9999 799998887653 3 45555555543222111 11223333222111 113333 788999999
Q ss_pred CCCChHHHHH--HHHHhcCCCHHHHHHHHhcCC
Q 012596 425 NVKMPVLTAV--ARIIDNELTPKKAVLELMSLP 455 (460)
Q Consensus 425 gv~~P~~~~v--~~ll~~~~~~~~~~~~l~~~~ 455 (460)
|+++|+++.+ .+++....+.......+..-|
T Consensus 286 gv~~Pi~~~av~ar~~s~~k~~R~~~~~~~~g~ 318 (480)
T 2zyd_A 286 GEPLSLITESVFARYISSLKDQRVAASKVLSGP 318 (480)
T ss_dssp TCCCHHHHHHHHHHHHHTCHHHHHHHHTTCCCC
T ss_pred CCCCchHHHHHHHHhhhcchhhhHHhhcccCCC
Confidence 9999999874 555555444444444444333
No 37
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.91 E-value=8.9e-24 Score=221.24 Aligned_cols=276 Identities=14% Similarity=0.086 Sum_probs=200.4
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhc-CCCC-eEEEEeCCHH----HHHHHHhhcCCCc--cCCCCC-------CCCceE
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANK-KSQL-KVYMLMRDPA----VCQSINEKHCNCR--YFPEQK-------LPENVI 188 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~-G~~~-~V~v~~r~~~----~~~~l~~~g~~~~--~~~~~~-------l~~~i~ 188 (460)
++++|||+|||+|.||.++|..|+++ | + +|++||++++ +++.+++.. ... |.++.. .+.++.
T Consensus 15 ~~~~mkIaVIGlG~mG~~lA~~la~~~G--~~~V~~~D~~~~~~~~kv~~l~~g~-~~i~~~e~gl~~l~~~~~~~g~l~ 91 (478)
T 3g79_A 15 RGPIKKIGVLGMGYVGIPAAVLFADAPC--FEKVLGFQRNSKSSGYKIEMLNRGE-SPLKGEEPGLEELIGKVVKAGKFE 91 (478)
T ss_dssp HCSCCEEEEECCSTTHHHHHHHHHHSTT--CCEEEEECCCCTTTTTHHHHHTTTC-CCSSCCGGGHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHHhCC--CCeEEEEECChhHhHHHHHHHHhcC-CCccccCCCHHHHHHhhcccCCeE
Confidence 44679999999999999999999999 9 9 9999999999 999987633 322 333321 145688
Q ss_pred EeCCHHhhcCCCcEEEEccchhc------------HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHH-HHhCCC
Q 012596 189 ATTDAKTALLGADYCLHAMPVQF------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIP-QALRNP 255 (460)
Q Consensus 189 a~~~~~ea~~~aDiVilaVp~~~------------~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~-~~lg~~ 255 (460)
++++ .+++++||+||+|||+.. +..+.++|.++++++++||..+ ++.+++.+.+.+.+. +..|..
T Consensus 92 ~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~pgtt~~v~~~ile~~~g~~ 169 (478)
T 3g79_A 92 CTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES-TITPGTTEGMAKQILEEESGLK 169 (478)
T ss_dssp EESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS-CCCTTTTTTHHHHHHHHHHCCC
T ss_pred EeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC-CCChHHHHHHHHHHHHHhcCCC
Confidence 8888 567899999999999652 5667788999999999998887 699998888876443 444531
Q ss_pred -CCCEEEEECcccHHHHhc----cCCeEEEEccCCHHHHHHHHHHHhcC-CceEEEcCChHHHHHHHHHHHHHHHHHHHH
Q 012596 256 -RQPFIALSGPSFALELMN----KLPTAMVVASKDRKLANAVQQLLASK-HLRISTSSDVTGVEIAGALKNVLAIAAGIV 329 (460)
Q Consensus 256 -~~~~~v~~gP~~a~e~~~----g~~~~i~i~~~d~~~~~~l~~lL~~~-g~~v~~~~Di~g~~~~kalkNv~ai~~g~~ 329 (460)
...+.++++|.++.+... ..+.. +++|.+.+.+++++++|+.. +..++...++...+..|++.
T Consensus 170 ~~~d~~v~~~Pe~~~~G~a~~~~~~~~~-Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~---------- 238 (478)
T 3g79_A 170 AGEDFALAHAPERVMVGRLLKNIREHDR-IVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAE---------- 238 (478)
T ss_dssp BTTTBEEEECCCCCCTTSHHHHHHHSCE-EEEESSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHH----------
T ss_pred cCCceeEEeCCccCCccchhhhhcCCcE-EEEeCCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHH----------
Confidence 135789999987654221 12334 46777888899999999987 66677777877766666554
Q ss_pred hcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhccccee
Q 012596 330 VGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAE 409 (460)
Q Consensus 330 ~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~e 409 (460)
|.+.++..++++|+..+|++.|+|++.+.+..+... .. ....+.+.+|..+ .|..
T Consensus 239 -------N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~-~~---ri~~~~~~PG~G~-GG~c------------- 293 (478)
T 3g79_A 239 -------NTFRDLQIAAINQLALYCEAMGINVYDVRTGVDSLK-GE---GITRAVLWPGAGV-GGHC------------- 293 (478)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC-CS---SSCCCCCCCCSCC-CSSH-------------
T ss_pred -------HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc-hh---hhccccCCCCCCc-chhh-------------
Confidence 456777889999999999999999988876532211 00 0011122222211 1111
Q ss_pred hhhhHHHHHHHHHHcCCC-------ChHHHHHHHHHhc
Q 012596 410 GVSTAGAVIALAQKYNVK-------MPVLTAVARIIDN 440 (460)
Q Consensus 410 g~kd~g~vv~lA~~~gv~-------~P~~~~v~~ll~~ 440 (460)
..||.++++..|+++|++ .|+.+++.++-..
T Consensus 294 ~~KD~~~l~~~a~~~g~~~~~~~~~~~li~~~~~iN~~ 331 (478)
T 3g79_A 294 LTKDTYHLERGVKIGRGELDYPEGADSIYVLARKVNDF 331 (478)
T ss_dssp HHHHHHHHHHHHTTSSCCCCCCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHH
Confidence 238999999999999987 8999999988543
No 38
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.90 E-value=3.9e-23 Score=202.62 Aligned_cols=252 Identities=15% Similarity=0.137 Sum_probs=176.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
||||+|||+|.||..+|..|++ | ++|++|+|++++++.+.+.|. ..++ +.++++++|+||+|
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g--~~V~~~~~~~~~~~~~~~~g~--------------~~~~-~~~~~~~~D~vi~~ 62 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-R--FPTLVWNRTFEKALRHQEEFG--------------SEAV-PLERVAEARVIFTC 62 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-T--SCEEEECSSTHHHHHHHHHHC--------------CEEC-CGGGGGGCSEEEEC
T ss_pred CCeEEEEcccHHHHHHHHHHhC-C--CeEEEEeCCHHHHHHHHHCCC--------------cccC-HHHHHhCCCEEEEe
Confidence 4789999999999999999999 8 899999999998888877653 1233 56677899999999
Q ss_pred cchhc-HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHH--HhccCCeEEEEcc
Q 012596 207 MPVQF-SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE--LMNKLPTAMVVAS 283 (460)
Q Consensus 207 Vp~~~-~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e--~~~g~~~~i~i~~ 283 (460)
+|... ++++++++.+.+++++++|+++++. +.+.+.+.+.+.+. ...++..|..... ...|.. .++.+
T Consensus 63 v~~~~~~~~v~~~l~~~l~~~~~vv~~s~~~-~~~~~~l~~~~~~~------g~~~~~~p~~~~~~~~~~g~~--~~~~~ 133 (289)
T 2cvz_A 63 LPTTREVYEVAEALYPYLREGTYWVDATSGE-PEASRRLAERLREK------GVTYLDAPVSGGTSGAEAGTL--TVMLG 133 (289)
T ss_dssp CSSHHHHHHHHHHHTTTCCTTEEEEECSCCC-HHHHHHHHHHHHTT------TEEEEECCEESHHHHHHHTCE--EEEEE
T ss_pred CCChHHHHHHHHHHHhhCCCCCEEEECCCCC-HHHHHHHHHHHHHc------CCEEEEecCCCChhHHhhCCe--EEEEC
Confidence 99764 8889999988888899999988743 22223344444331 2334455643322 223332 23345
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012596 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (460)
Q Consensus 284 ~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~~ 363 (460)
++.+.++.++++| ..|.+++..++.....|.|...| ....++..++.|+..++++.|+++++
T Consensus 134 ~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n-----------------~~~~~~~~~~~Ea~~l~~~~G~~~~~ 195 (289)
T 2cvz_A 134 GPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINN-----------------ALLAVNLWAAGEGLLALVKQGVSAEK 195 (289)
T ss_dssp SCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHcCcCHHH
Confidence 6888999999999 99988777777655556654444 44567789999999999999999887
Q ss_pred cccccCCCce---eeec--c-cCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHH
Q 012596 364 ITGLSGTGDI---MLTC--F-VNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARI 437 (460)
Q Consensus 364 ~~~~~~~gd~---~~t~--~-s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~l 437 (460)
+.++...+.. +... . +...+++ ..|++++. ..||++.++++++++|+++|++++++++
T Consensus 196 ~~~~~~~~~~~s~~~~~~~~~~~l~~~~------~~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~v~~~ 259 (289)
T 2cvz_A 196 ALEVINASSGRSNATENLIPQRVLTRAF------PKTFALGL----------LVKDLGIAMGVLDGEKAPSPLLRLAREV 259 (289)
T ss_dssp HHHHHTTSTTCBHHHHHTHHHHTTTSCC------CCSSBHHH----------HHHHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred HHHHHHccCCCCHHHHHhccchhhcCCC------CCCcChHH----------HHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 7665322210 0000 0 1111111 12333332 3478999999999999999999999998
Q ss_pred Hh
Q 012596 438 ID 439 (460)
Q Consensus 438 l~ 439 (460)
++
T Consensus 260 ~~ 261 (289)
T 2cvz_A 260 YE 261 (289)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 39
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.90 E-value=3.6e-24 Score=220.58 Aligned_cols=303 Identities=12% Similarity=0.120 Sum_probs=183.2
Q ss_pred CCeEEEECcchHHHHHHHHHHh-cCCCCeEEEEe---CCHHHHHHH-HhhcC--CCccCCC--CCCCCceE-EeCCHHhh
Q 012596 127 TNKVVVLGGGSFGTAMAAHVAN-KKSQLKVYMLM---RDPAVCQSI-NEKHC--NCRYFPE--QKLPENVI-ATTDAKTA 196 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~-~G~~~~V~v~~---r~~~~~~~l-~~~g~--~~~~~~~--~~l~~~i~-a~~~~~ea 196 (460)
+|||+|||+|+||+++|..|++ +| ++|++|+ |++++++.+ ++.|. +..+.++ ..++..+. ++++++++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G--~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 79 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDG--VEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIA 79 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTT--EEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhCCC--CEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHH
Confidence 4799999999999999999998 58 9999999 887778774 33332 1112222 11122233 67788888
Q ss_pred cCCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc--cchhhhHHHHHHHH-h-CCCCCC-EEEEECcccHHHH
Q 012596 197 LLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE--LNTLRMMSQIIPQA-L-RNPRQP-FIALSGPSFALEL 271 (460)
Q Consensus 197 ~~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~--~~~~~~l~e~l~~~-l-g~~~~~-~~v~~gP~~a~e~ 271 (460)
++++|+||+|||+....+++++|.++++++++|++++++.+ ......+.+...+. + +....+ .+.+.||+++.+.
T Consensus 80 ~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~gpg~~v~~ 159 (404)
T 3c7a_A 80 ISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAGFEFQCRDILGDKAAAVSMMSFETLPWACRIKEFGRKVEV 159 (404)
T ss_dssp HTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTTHHHHHHHHHGGGGGTSEEEEESSCSEEEEEEETTTEEEE
T ss_pred hCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCccHHHHHHHHHHhcCCCeEEEEecCchHhhcccCCCcEEEE
Confidence 89999999999999999999999999999999999654443 22111222211111 1 100122 3556778754333
Q ss_pred hccCCeEEEEccC--CHHHHHHHHHHHhcCCc-e-EEEcCChHHHHHHHHHHHHHHHHHHHHhcc------c------CC
Q 012596 272 MNKLPTAMVVASK--DRKLANAVQQLLASKHL-R-ISTSSDVTGVEIAGALKNVLAIAAGIVVGM------N------LG 335 (460)
Q Consensus 272 ~~g~~~~i~i~~~--d~~~~~~l~~lL~~~g~-~-v~~~~Di~g~~~~kalkNv~ai~~g~~~~~------k------l~ 335 (460)
..+.. .+.++.. +.+..+++.++|...+. . +..++|+.+.+|.. |++.++.++..+. . +.
T Consensus 160 ~~~~~-~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~di~~~~l~~---N~~~~~~~~l~~~~~~~g~~~~~~~~~~ 235 (404)
T 3c7a_A 160 LGTKS-VLAASLIKGTAKTVDPLSTLQMLHGAEPVFRLAKHFLEMLIMS---YSFVHPAILFGRWGSWDGKPVPEAPLFY 235 (404)
T ss_dssp EEECS-EEEEEEECCSSCCSCHHHHHHHHHCSSSEEEECSCHHHHHHTT---CTTHHHHHHHHHHTTCCSCCBSSCCBSG
T ss_pred EEECc-eEEEEEccCCcchHHHHHHHHHHhCCCCceeEcCCEeeeeecC---CceeccHHHHHHHHhhhcCCCCCCCccc
Confidence 22221 1222211 11222345555555554 3 67899999888773 6655544444222 1 33
Q ss_pred C---cHHHHHHHHHHHHHHHHHHHc-----CCCccccccccCCCceeeecccCCCccc-hHHHHhhCC-------CC---
Q 012596 336 N---NSMAALVAQGCSEIRWLATKM-----GAKPATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSG-------EK--- 396 (460)
Q Consensus 336 ~---n~~~al~~~~~~E~~~la~a~-----Gi~~~~~~~~~~~gd~~~t~~s~~srn~-~~g~~l~~g-------~~--- 396 (460)
. +....++.+++.|+.++++++ |+++.++. ++++.+.+++.....++ ++...+... +|
T Consensus 236 ~~~~~~~~~l~~~~~~E~~~va~a~~~~~~G~~~~~~~---~~~d~~~~~~~~~~~~~~s~~~~~~~~~~~~d~~~P~~~ 312 (404)
T 3c7a_A 236 QGIDQATADMLTACSNECKDVANAIMAACPGNDLSDVK---DIYQWYLEYYHEDIQDDHDLYHAITTNKSYKGLVHPVKA 312 (404)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCTTCC---CHHHHHHHHSTTTBSCCSSHHHHHHTBGGGTTCBCCEEE
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCC---CHHHHHHHhCCCccCChhhHHHHHHhhhhhccCCCCCCC
Confidence 3 357799999999999999999 99975441 22233333332111111 111111110 01
Q ss_pred hHHH----Hhhcccceehh-hhHHHHHHHHHHcCCCChHHHHHHHHHh
Q 012596 397 LDDI----LSSMNQVAEGV-STAGAVIALAQKYNVKMPVLTAVARIID 439 (460)
Q Consensus 397 ~e~~----~~~~~~~~eg~-kd~g~vv~lA~~~gv~~P~~~~v~~ll~ 439 (460)
.| + ....+...|++ ..++.++++|+++||++|+++++|++++
T Consensus 313 te-~~~~~d~~~r~~~Edv~~~~~~v~~la~~~gV~tP~~~~l~~l~~ 359 (404)
T 3c7a_A 313 VD-GGVAPDFGNRYLTEDIPMGMIVFKGVAIAAGVAIPSNDKLIMWAQ 359 (404)
T ss_dssp ET-TEEEECCCSSTTTTTTTTTHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred cC-CCccCCccccccccccccchHHHHHHHHHhCCCCchHHHHHHHHH
Confidence 00 0 00123455634 4789999999999999999999999975
No 40
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.90 E-value=3.5e-23 Score=203.70 Aligned_cols=256 Identities=15% Similarity=0.133 Sum_probs=179.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+||||+|||+|.||..+|..|++.| ++|++|+ ++++++.+.+.|. ..+++++++++++|+||+
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~-~~~~~~~~~~~g~--------------~~~~~~~~~~~~~D~vi~ 64 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARAG--HQLHVTT-IGPVADELLSLGA--------------VNVETARQVTEFADIIFI 64 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHTT--CEEEECC-SSCCCHHHHTTTC--------------BCCSSHHHHHHTCSEEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCC--CEEEEEc-CHHHHHHHHHcCC--------------cccCCHHHHHhcCCEEEE
Confidence 4589999999999999999999998 8999999 8877777776542 234578888889999999
Q ss_pred ccchhc-HHHHHH---HhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH--hccCCeEE
Q 012596 206 AMPVQF-SSSFLE---GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL--MNKLPTAM 279 (460)
Q Consensus 206 aVp~~~-~~~vl~---~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~--~~g~~~~i 279 (460)
|+|... ++.++. ++.+.++++++||++++|.. .+.+.+.+.+.+. ...++..|...... ..+.. .+
T Consensus 65 ~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~-~~~~~l~~~~~~~------g~~~~~~p~~~~~~~a~~g~~-~~ 136 (295)
T 1yb4_A 65 MVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISP-IETKRFAQRVNEM------GADYLDAPVSGGEIGAREGTL-SI 136 (295)
T ss_dssp CCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCH-HHHHHHHHHHHTT------TEEEEECCEESHHHHHHHTCE-EE
T ss_pred ECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCH-HHHHHHHHHHHHc------CCeEEEccCCCCHHHHHcCCe-EE
Confidence 998654 888887 78888889999999998642 2223444444331 23344555543321 13332 23
Q ss_pred EEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 012596 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGA 359 (460)
Q Consensus 280 ~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi 359 (460)
++ +++.+.+++++++|+..|.++++.++.....|.|++.|. ...++..++.|+..++++.|+
T Consensus 137 ~~-~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~-----------------~~~~~~~~~~E~~~l~~~~G~ 198 (295)
T 1yb4_A 137 MV-GGEQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQI-----------------IVALNIEAVSEALVFASKAGA 198 (295)
T ss_dssp EE-ESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHTTC
T ss_pred EE-CCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHcCC
Confidence 34 458888999999999999888877776666676665553 445667899999999999999
Q ss_pred CccccccccCCCceeeecccCCCccchHHHHhh----CCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHH
Q 012596 360 KPATITGLSGTGDIMLTCFVNLSRNRTVGVRLG----SGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVA 435 (460)
Q Consensus 360 ~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~----~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~ 435 (460)
+++++.++...+.. .+. ..++ ..+..+. .|++.+. ..||+++++++++++|+++|++++++
T Consensus 199 ~~~~~~~~~~~~~~--~s~--~~~~-~~~~~~~~~~~~g~~~~~----------~~kd~~~~~~~a~~~g~~~p~~~~~~ 263 (295)
T 1yb4_A 199 DPVRVRQALMGGFA--SSR--ILEV-HGERMINRTFEPGFKIAL----------HQKDLNLALQSAKALALNLPNTATCQ 263 (295)
T ss_dssp CHHHHHHHHTSSSS--CBH--HHHH-HHHHHHTTCCCCSSBHHH----------HHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CHHHHHHHHHcCCC--CCH--HHHH-hhHHHhcCCCCCCCchHH----------HHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 98877664322210 000 0011 1112221 2344432 34899999999999999999999999
Q ss_pred HHHh
Q 012596 436 RIID 439 (460)
Q Consensus 436 ~ll~ 439 (460)
++++
T Consensus 264 ~~~~ 267 (295)
T 1yb4_A 264 ELFN 267 (295)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9886
No 41
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.89 E-value=4.6e-22 Score=200.77 Aligned_cols=287 Identities=19% Similarity=0.160 Sum_probs=176.3
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCC--CCce-EEeCCHHhhcCCC
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKL--PENV-IATTDAKTALLGA 200 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l--~~~i-~a~~~~~ea~~~a 200 (460)
||++|||+|||+|+||+.+|..|+++| ++|++|+|++++++.+++.+. . ++.+... ...+ .++++++++++++
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g--~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKG--QSVLAWDIDAQRIKEIQDRGA-I-IAEGPGLAGTAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHTS-E-EEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHhcCC-e-EEeccccccccccceecCCHHHHHhcC
Confidence 456689999999999999999999999 899999999999998887631 0 1111101 0112 3567888888899
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC--------CCCEEE-EECcccHHHH
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--------RQPFIA-LSGPSFALEL 271 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~--------~~~~~v-~~gP~~a~e~ 271 (460)
|+||+|||+....++++++.+.++++++||+++ |+..++. .+.+.+.+. +.. ..+... ..||+++...
T Consensus 77 D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~-~~~~~~~-~~~~~l~~~-~~~~v~~~~~~~~~~~~~~~gpg~v~~~ 153 (359)
T 1bg6_A 77 DVILIVVPAIHHASIAANIASYISEGQLIILNP-GATGGAL-EFRKILREN-GAPEVTIGETSSMLFTCRSERPGQVTVN 153 (359)
T ss_dssp SEEEECSCGGGHHHHHHHHGGGCCTTCEEEESS-CCSSHHH-HHHHHHHHT-TCCCCEEEEESSCSEEEECSSTTEEEEE
T ss_pred CEEEEeCCchHHHHHHHHHHHhCCCCCEEEEcC-CCchHHH-HHHHHHHhc-CCCCeEEEEecCCcEEEEeCCCCEEEEE
Confidence 999999999999999999999999999999884 4433322 234444432 210 012222 2455433311
Q ss_pred hccCCeEEEEc----cCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHH--------HHHHHh--cccCC--
Q 012596 272 MNKLPTAMVVA----SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAI--------AAGIVV--GMNLG-- 335 (460)
Q Consensus 272 ~~g~~~~i~i~----~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai--------~~g~~~--~~kl~-- 335 (460)
.. . ..+.++ +.+.+.++.++++|.. +...+|+ |.|+++|+.++ .++... +..+.
T Consensus 154 ~~-~-~~~~~g~~~~~~~~~~~~~l~~~~~~----~~~~~di----~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~ 223 (359)
T 1bg6_A 154 AI-K-GAMDFACLPAAKAGWALEQIGSVLPQ----YVAVENV----LHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYL 223 (359)
T ss_dssp EE-C-SCEEEEEESGGGHHHHHHHHTTTCTT----EEECSCH----HHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHH
T ss_pred Ee-e-cceEEEeccccccHHHHHHHHHHhhh----cEEcCCh----HhhhccCCCccccHHHHHhhhchhhcCCccchhh
Confidence 10 0 111222 3344567788888754 2345664 78888775333 122221 01111
Q ss_pred ---CcHHHHHHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccC---CCccchHHHHhhCCCChHHHHhhccccee
Q 012596 336 ---NNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVN---LSRNRTVGVRLGSGEKLDDILSSMNQVAE 409 (460)
Q Consensus 336 ---~n~~~al~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~---~srn~~~g~~l~~g~~~e~~~~~~~~~~e 409 (460)
.+....++.++++|+.++++++|++++++.+........ .... ..+..++.+|+. ++.| ++
T Consensus 224 ~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~--~~~~l~~~~~~~sm~~d~~--~~~e---------~~ 290 (359)
T 1bg6_A 224 EGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQ--SPATIYEAVQGNPAYRGIA--GPIN---------LN 290 (359)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC---------CCSHHHHHHTCGGGTTCB--CCSS---------SC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCC--CcccHHHHHhcchhhcCCC--CCCC---------CC
Confidence 445678899999999999999999987665531110000 0000 000112223332 1221 11
Q ss_pred h---hhh----HHHHHHHHHHcCCCChHHHHHHHHHhc
Q 012596 410 G---VST----AGAVIALAQKYNVKMPVLTAVARIIDN 440 (460)
Q Consensus 410 g---~kd----~g~vv~lA~~~gv~~P~~~~v~~ll~~ 440 (460)
. .+| +++++++|+++|+++|+++.++++++.
T Consensus 291 ~~~~~~D~~~~~g~~~~~a~~~gv~~P~~~~l~~~~~~ 328 (359)
T 1bg6_A 291 TRYFFEDVSTGLVPLSELGRAVNVPTPLIDAVLDLISS 328 (359)
T ss_dssp CHHHHHHHHTTHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred ccceecCcCccHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 1 133 489999999999999999999999864
No 42
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.88 E-value=8.5e-23 Score=214.87 Aligned_cols=282 Identities=14% Similarity=0.074 Sum_probs=191.3
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC---CCcEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL---GADYC 203 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~---~aDiV 203 (460)
|||+|||+|.||+.+|..|+++| ++|++|+|++++++.+.+. |.. + .+.++..+++++++++ ++|+|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G--~~V~v~dr~~~~~~~l~~~~g~~----~---~~~~i~~~~~~~e~v~~l~~aDvV 72 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG--FKVAVFNRTYSKSEEFMKANASA----P---FAGNLKAFETMEAFAASLKKPRKA 72 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHTTTS----T---TGGGEEECSCHHHHHHHBCSSCEE
T ss_pred CEEEEEChHHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhcCCC----C---CCCCeEEECCHHHHHhcccCCCEE
Confidence 68999999999999999999999 8999999999999988875 321 1 1124667788888766 49999
Q ss_pred EEccchh-cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHH-H-hccCCeEEE
Q 012596 204 LHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE-L-MNKLPTAMV 280 (460)
Q Consensus 204 ilaVp~~-~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e-~-~~g~~~~i~ 280 (460)
|+|||+. .++++++++.+.++++++||+++||...++ ..+.+.+.+. | ..++..|....+ . ..|. .++
T Consensus 73 ilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~-~~l~~~l~~~-g-----~~~v~~pv~gg~~~a~~g~--~i~ 143 (478)
T 1pgj_A 73 LILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQ-GRRAQQLEAA-G-----LRFLGMGISGGEEGARKGP--AFF 143 (478)
T ss_dssp EECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHH-HHHHHHHHTT-T-----CEEEEEEEESHHHHHHHCC--EEE
T ss_pred EEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHH-HHHHHHHHHC-C-----CeEEEeeccCCHHHHhcCC--eEe
Confidence 9999985 799999999999999999999999876543 2333444331 2 122333333222 1 2333 344
Q ss_pred EccCCHHHHHHHHHHHhcCCce-------EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHH
Q 012596 281 VASKDRKLANAVQQLLASKHLR-------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWL 353 (460)
Q Consensus 281 i~~~d~~~~~~l~~lL~~~g~~-------v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~l 353 (460)
++ ++.+..+.++++|+..+.+ +.+.++. |.+...|+.+|....+..+++.|+..+
T Consensus 144 ~g-g~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~-----------------G~g~~~Kl~~N~~~~~~~~~i~Ea~~l 205 (478)
T 1pgj_A 144 PG-GTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSG-----------------GAGSCVKMYHNSGEYAILQIWGEVFDI 205 (478)
T ss_dssp EE-ECHHHHHHHHHHHHHHSCBCTTSCBSCCCCCST-----------------THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-CCHHHHHHHHHHHHHhcccccCCCeeEEEeCCc-----------------hHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 44 4788899999999987765 3333332 222334455666677888999999999
Q ss_pred HHHcCCCccccccccC----CCceeeecccCCCccchHHHHhh----CC-CChHHHHhhcccceehhhhH-HHHHHHHHH
Q 012596 354 ATKMGAKPATITGLSG----TGDIMLTCFVNLSRNRTVGVRLG----SG-EKLDDILSSMNQVAEGVSTA-GAVIALAQK 423 (460)
Q Consensus 354 a~a~Gi~~~~~~~~~~----~gd~~~t~~s~~srn~~~g~~l~----~g-~~~e~~~~~~~~~~eg~kd~-g~vv~lA~~ 423 (460)
+++.|++++++.++.. .|.. .+...+++ +..+. .| ..++.+.+ ..+.|+. +.++++|++
T Consensus 206 ~~~~G~~~~~~~~l~~~w~~~g~~----~s~l~~~~--~~~l~~~d~~G~~~ld~i~D-----~~~~kgtg~~~~~~A~~ 274 (478)
T 1pgj_A 206 LRAMGLNNDEVAAVLEDWKSKNFL----KSYMLDIS--IAAARAKDKDGSYLTEHVMD-----RIGSKGTGLWSAQEALE 274 (478)
T ss_dssp HHHTTCCHHHHHHHHHHHHHTSTT----CBHHHHHH--HHHHHCBCTTSSBGGGGBCC-----CCCCCSHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHhccCCCc----CchHHHhh--chhhhcCCCCChhHHHHHHH-----HhcCccHHHHHHHHHHH
Confidence 9999999887765421 1110 00001111 11121 23 22222211 0112344 699999999
Q ss_pred cCCCChHHHH-HH-HHHhcCCCHHHHHHHHhcCCC
Q 012596 424 YNVKMPVLTA-VA-RIIDNELTPKKAVLELMSLPQ 456 (460)
Q Consensus 424 ~gv~~P~~~~-v~-~ll~~~~~~~~~~~~l~~~~~ 456 (460)
+|+++|+++. ++ +++....+++.+++.++.-|.
T Consensus 275 ~Gv~~Pi~~~av~~r~ls~~~~~r~~~~~~l~~~~ 309 (478)
T 1pgj_A 275 IGVPAPSLNMAVVSRQFTMYKTERQANASNAPGIT 309 (478)
T ss_dssp HTCCCHHHHHHHHHHHHHHTHHHHHHHHHHSTTTT
T ss_pred hCCCChHHHHHHHHHHHhCCCCHHHHHHHhcCCCC
Confidence 9999999998 65 788888889999999887765
No 43
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.88 E-value=2.7e-22 Score=211.27 Aligned_cols=275 Identities=17% Similarity=0.199 Sum_probs=197.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC------CCCceEEeCCHHhhcCC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK------LPENVIATTDAKTALLG 199 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~------l~~~i~a~~~~~ea~~~ 199 (460)
++|||+|||+|.||.++|..|+++|.+++|++||+++++++.+++.+ ...+.++.. ...++.+++++.+++++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~-~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~ 86 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDK-LPIYEPGLDEIVFAARGRNLFFSSDIPKAIAE 86 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS-CSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHHhhcCCEEEECCHHHHhhc
Confidence 35899999999999999999999833389999999999999987643 223323210 02357888898888899
Q ss_pred CcEEEEccchh---------------cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCC-CCCCEEEEE
Q 012596 200 ADYCLHAMPVQ---------------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRN-PRQPFIALS 263 (460)
Q Consensus 200 aDiVilaVp~~---------------~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~-~~~~~~v~~ 263 (460)
||+||+|||+. .+.+++++|.++++++++||..+ ++.+.+.+.+.+.+.+..+. ....+.+.+
T Consensus 87 aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~gt~~~l~~~l~~~~~~~~~~d~~v~~ 165 (481)
T 2o3j_A 87 ADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS-TVPVKAAESIGCILREAQKNNENLKFQVLS 165 (481)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHTC----CCEEEEE
T ss_pred CCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC-CCCCCHHHHHHHHHHHhhCcCcCCceEEEe
Confidence 99999999864 27888899999999999999877 58887766777777662231 123466889
Q ss_pred CcccHHHHh----ccCCeEEEEccCCH----HHHHHHHHHHhcCCc-eEEEcCChHHHHHHHHHHHHHHHHHHHHhcccC
Q 012596 264 GPSFALELM----NKLPTAMVVASKDR----KLANAVQQLLASKHL-RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNL 334 (460)
Q Consensus 264 gP~~a~e~~----~g~~~~i~i~~~d~----~~~~~l~~lL~~~g~-~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl 334 (460)
+|.+..+.. ...+..+++++.+. +.+++++++|+..+. .++...|+...+|.|++.|.
T Consensus 166 ~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~------------- 232 (481)
T 2o3j_A 166 NPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANA------------- 232 (481)
T ss_dssp CCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHH-------------
T ss_pred CcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHH-------------
Confidence 998765321 12333456776542 577899999998874 66677788889999877664
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhH
Q 012596 335 GNNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTA 414 (460)
Q Consensus 335 ~~n~~~al~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~ 414 (460)
+.++..++++|+..+|++.|+|++++.+..+....+ . .+.+..|..+ .|.. ..||.
T Consensus 233 ----~~a~~ia~~nE~~~la~~~Gid~~~v~~~~~~~~ri----~--~~~~~pg~g~-gg~c-------------~~KD~ 288 (481)
T 2o3j_A 233 ----FLAQRISSINSISAVCEATGAEISEVAHAVGYDTRI----G--SKFLQASVGF-GGSC-------------FQKDV 288 (481)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHTSTTT----C--SSSCCCCSCC-CSSS-------------HHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHccCCCC----C--CCCCCCCCcc-CCcc-------------HHHHH
Confidence 456678899999999999999998887653321100 0 1111111111 1112 23899
Q ss_pred HHHHHHHHHcCCC--ChHHHHHHHHHh
Q 012596 415 GAVIALAQKYNVK--MPVLTAVARIID 439 (460)
Q Consensus 415 g~vv~lA~~~gv~--~P~~~~v~~ll~ 439 (460)
++++.+|+++|++ +|+.+++.++-.
T Consensus 289 ~~l~~~A~~~g~~~~~~l~~~~~~~N~ 315 (481)
T 2o3j_A 289 LSLVYLCESLNLPQVADYWQGVININN 315 (481)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccchHHHHHHHHHH
Confidence 9999999999999 999999887644
No 44
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.88 E-value=2.7e-22 Score=199.42 Aligned_cols=261 Identities=15% Similarity=0.104 Sum_probs=173.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
++|||+|||+|.||..||..|+++| ++|++|||++++++.+.+.|. ..+++++++++++|+||+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~~~~~~~~~g~--------------~~~~~~~e~~~~aDvVi~ 71 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQG--KRVAIWNRSPGKAAALVAAGA--------------HLCESVKAALSASPATIF 71 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHTC--------------EECSSHHHHHHHSSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHCCC--------------eecCCHHHHHhcCCEEEE
Confidence 3689999999999999999999999 999999999999998887652 456788898999999999
Q ss_pred ccchh-cHHHHHH--HhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012596 206 AMPVQ-FSSSFLE--GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (460)
Q Consensus 206 aVp~~-~~~~vl~--~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~ 282 (460)
|||.. .+++++. .+.. +.++++||++++ +.+.+.+.+.+.+.+. |. .++.+|..+.....+.....++.
T Consensus 72 ~vp~~~~~~~v~~~~~l~~-~~~g~ivid~st-~~~~~~~~l~~~~~~~-g~-----~~vdapv~g~~~~~~~~~~~i~~ 143 (306)
T 3l6d_A 72 VLLDNHATHEVLGMPGVAR-ALAHRTIVDYTT-NAQDEGLALQGLVNQA-GG-----HYVKGMIVAYPRNVGHRESHSIH 143 (306)
T ss_dssp CCSSHHHHHHHHTSTTHHH-HTTTCEEEECCC-CCTTHHHHHHHHHHHT-TC-----EEEEEEEESCGGGTTCTTCEEEE
T ss_pred EeCCHHHHHHHhcccchhh-ccCCCEEEECCC-CCHHHHHHHHHHHHHc-CC-----eEEecccccCcccccCCceEEEE
Confidence 99976 4888886 6654 467899999886 5555555555655543 32 23333333211111111223455
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEc--CChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 012596 283 SKDRKLANAVQQLLASKHLRISTS--SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (460)
Q Consensus 283 ~~d~~~~~~l~~lL~~~g~~v~~~--~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~ 360 (460)
+++.+.+++++++|+..+-++.+. ++-.+ -+.++| .+......++.|+..++++.|+|
T Consensus 144 gg~~~~~~~~~~ll~~lg~~~~~~~~g~~~g--~g~~~k------------------~~~~~~~~~~~Ea~~la~~~Gld 203 (306)
T 3l6d_A 144 TGDREAFEQHRALLEGLAGHTVFLPWDEALA--FATVLH------------------AHAFAAMVTFFEAVGAGDRFGLP 203 (306)
T ss_dssp EECHHHHHHHHHHHHTTCSEEEECCHHHHHH--HHHHHH------------------HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHHHHhcCCEEEecCCCCcc--HHHHHH------------------HHHHHHHHHHHHHHHHHHHcCCC
Confidence 568899999999999986677765 43111 122222 12233467899999999999999
Q ss_pred ccccccccCCCceeeecccCCCccchHHHHhh-CCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHh
Q 012596 361 PATITGLSGTGDIMLTCFVNLSRNRTVGVRLG-SGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (460)
Q Consensus 361 ~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~-~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~ 439 (460)
++.+.++...+.. ...+....+ .+..+. ..++..- .......||+++++++|++.|+++|+.+.+.+++.
T Consensus 204 ~~~~~~~~~~~~~--~~~s~~~~~--~~~~~~~~~~~~~~-----~~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~ 274 (306)
T 3l6d_A 204 VSKTARLLLETSR--FFVADALEE--AVRRLETQDFKGDQ-----ARLDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQ 274 (306)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHH--HHHHHHHTCCCTTS-----SBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhh--hcccHHHHH--HHHHHhcCCCCCCc-----ccHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHH
Confidence 9888764211000 000000011 122221 1111000 01122458999999999999999999999988885
No 45
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.88 E-value=2.9e-22 Score=210.73 Aligned_cols=279 Identities=14% Similarity=0.138 Sum_probs=184.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC---CcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG---ADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~---aDiV 203 (460)
+|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+... + .++..+++++++++. +|+|
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~------~----~gi~~~~s~~e~v~~l~~aDvV 72 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG--YTVAIYNRTTSKTEEVFKEHQ------D----KNLVFTKTLEEFVGSLEKPRRI 72 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHTT------T----SCEEECSSHHHHHHTBCSSCEE
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC--CEEEEEcCCHHHHHHHHHhCc------C----CCeEEeCCHHHHHhhccCCCEE
Confidence 479999999999999999999999 899999999999988876521 0 135667788887765 9999
Q ss_pred EEccch-hcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH--hccCCeEEE
Q 012596 204 LHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL--MNKLPTAMV 280 (460)
Q Consensus 204 ilaVp~-~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~--~~g~~~~i~ 280 (460)
|+|||+ ..++++++++.+.++++++||++++|...++ .. +.+.+... ...++..|....+. ..|. . ++
T Consensus 73 ilavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~-~~----l~~~l~~~--g~~~v~~pv~gg~~~a~~g~-~-i~ 143 (474)
T 2iz1_A 73 MLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDT-MR----RNAELADS--GINFIGTGVSGGEKGALLGP-S-MM 143 (474)
T ss_dssp EECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HH----HHHHTTTS--SCEEEEEEECSHHHHHHHCC-C-EE
T ss_pred EEEccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHH-HH----HHHHHHHC--CCeEECCCCCCChhhhccCC-e-EE
Confidence 999998 5789999999999999999999999875543 12 22333221 22344445543332 2333 3 34
Q ss_pred EccCCHHHHHHHHHHHhcCCce--------EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHH
Q 012596 281 VASKDRKLANAVQQLLASKHLR--------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRW 352 (460)
Q Consensus 281 i~~~d~~~~~~l~~lL~~~g~~--------v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~ 352 (460)
.+ ++.+..+.++++|+..+.+ +.+.++.....| +|+.+|....+..+++.|+..
T Consensus 144 ~g-g~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~-----------------~Kl~~N~~~~~~~~~laEa~~ 205 (474)
T 2iz1_A 144 PG-GQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHY-----------------VKMVHNGIEYGDMQLIAESYD 205 (474)
T ss_dssp EE-ECHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHH-----------------HHHHHHHHHHHHHHHHHHHHH
T ss_pred ec-CCHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHH-----------------HHHHHhHHHHHHHHHHHHHHH
Confidence 44 4788999999999987765 344444322223 344455666778899999999
Q ss_pred HHHH-cCCCcccccccc-----C-CCceeeecccC--CCccchHHHHhhCC-CChHHHHhhcccceehhhhHH-HHHHHH
Q 012596 353 LATK-MGAKPATITGLS-----G-TGDIMLTCFVN--LSRNRTVGVRLGSG-EKLDDILSSMNQVAEGVSTAG-AVIALA 421 (460)
Q Consensus 353 la~a-~Gi~~~~~~~~~-----~-~gd~~~t~~s~--~srn~~~g~~l~~g-~~~e~~~~~~~~~~eg~kd~g-~vv~lA 421 (460)
++++ +|++++++.++. + +++.+.++++. .++|+. .| ..++.+.+ ..+.|+.+ .++++|
T Consensus 206 l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~------~g~~~vd~i~D-----~~~~k~tG~~~~~~A 274 (474)
T 2iz1_A 206 LLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDE------GEGYIVDKILD-----KAGNKGTGKWTSESA 274 (474)
T ss_dssp HHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBCSS------SSSBGGGGBCS-----CCCCCSHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCCCC------CChhHHHHHHH-----hhcccchHHHHHHHH
Confidence 9999 899988776542 2 33333333332 233432 22 22221111 11225556 688999
Q ss_pred HHcCCCChHHHHH--HHHHhcCCCHHHHHHHHhcCC
Q 012596 422 QKYNVKMPVLTAV--ARIIDNELTPKKAVLELMSLP 455 (460)
Q Consensus 422 ~~~gv~~P~~~~v--~~ll~~~~~~~~~~~~l~~~~ 455 (460)
+++|+++|+++.+ .+++....+.......+..-|
T Consensus 275 ~~~gv~~P~~~~av~ar~~s~~k~~r~~~~~~~~g~ 310 (474)
T 2iz1_A 275 LDLGVPLPLITESVFARYISTYKDERVKASKVLSGP 310 (474)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCC
T ss_pred HHcCCCCchHHHHHHHHHhhhhhhhhHHhhhccCCC
Confidence 9999999999874 444444444444444444434
No 46
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.87 E-value=1.1e-21 Score=199.00 Aligned_cols=195 Identities=7% Similarity=0.021 Sum_probs=141.0
Q ss_pred hhccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCC-
Q 012596 122 DILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA- 200 (460)
Q Consensus 122 ~~~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~a- 200 (460)
++|+++|||+|||+|.||..||.+|+++| ++|++|||++++++.+.+.|. ..+++++++++.+
T Consensus 17 ~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G--~~V~v~dr~~~~~~~l~~~g~--------------~~~~s~~e~~~~a~ 80 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMGADMVRRLRKGG--HECVVYDLNVNAVQALEREGI--------------AGARSIEEFCAKLV 80 (358)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTTC--------------BCCSSHHHHHHHSC
T ss_pred hhhhcCCEEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHCCC--------------EEeCCHHHHHhcCC
Confidence 47778899999999999999999999999 999999999999998887653 3456788888888
Q ss_pred --cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeE
Q 012596 201 --DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTA 278 (460)
Q Consensus 201 --DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~ 278 (460)
|+||+|||...++++++++.+.++++++||+++++. +.+...+.+.+.+. |..+.++.+..||..+. .|. .
T Consensus 81 ~~DvVi~~vp~~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~-g~~~vdapVsGg~~~a~---~G~--~ 153 (358)
T 4e21_A 81 KPRVVWLMVPAAVVDSMLQRMTPLLAANDIVIDGGNSH-YQDDIRRADQMRAQ-GITYVDVGTSGGIFGLE---RGY--C 153 (358)
T ss_dssp SSCEEEECSCGGGHHHHHHHHGGGCCTTCEEEECSSCC-HHHHHHHHHHHHTT-TCEEEEEEEECGGGHHH---HCC--E
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEeCCCCC-hHHHHHHHHHHHHC-CCEEEeCCCCCCHHHHh---cCC--e
Confidence 999999998899999999999999999999998754 33333444444432 32223444444544333 343 3
Q ss_pred EEEccCCHHHHHHHHHHHhcCC--------------------ceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcH
Q 012596 279 MVVASKDRKLANAVQQLLASKH--------------------LRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNS 338 (460)
Q Consensus 279 i~i~~~d~~~~~~l~~lL~~~g--------------------~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~ 338 (460)
++.+++.+.+++++++|+..+ ..+.+.++.-..+..| +.+|.
T Consensus 154 -im~GG~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~K-----------------l~~n~ 215 (358)
T 4e21_A 154 -LMIGGEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVK-----------------MVHNG 215 (358)
T ss_dssp -EEEESCHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHH-----------------HHHHH
T ss_pred -eeecCCHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHH-----------------HHHHH
Confidence 445567899999999999876 3455555543333333 33455
Q ss_pred HHHHHHHHHHHHHHHHHHc
Q 012596 339 MAALVAQGCSEIRWLATKM 357 (460)
Q Consensus 339 ~~al~~~~~~E~~~la~a~ 357 (460)
+......+++|++.++++.
T Consensus 216 l~~~~i~~~aE~~~la~~a 234 (358)
T 4e21_A 216 IEYGLMAAYAEGLNILHHA 234 (358)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 5666778999999999998
No 47
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.87 E-value=3.3e-21 Score=202.32 Aligned_cols=274 Identities=15% Similarity=0.159 Sum_probs=190.2
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--CC----CceEEeCCHHhhc
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--LP----ENVIATTDAKTAL 197 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~--l~----~~i~a~~~~~ea~ 197 (460)
|+++|||+|||+|.||.++|..|+++|.+++|++|||++++++.+++.+ ...+.++.. +. .++.+++++.+++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~-~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~ 80 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPT-LPIYEPGLKEVVESCRGKNLFFSTNIDDAI 80 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS-CSSCCTTHHHHHHHHBTTTEEEESCHHHHH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCC-CCcCCCCHHHHHHHhhcCCEEEECCHHHHH
Confidence 4457899999999999999999999932289999999999999886643 233333321 11 3577888988888
Q ss_pred CCCcEEEEccchhc---------------HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEE
Q 012596 198 LGADYCLHAMPVQF---------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL 262 (460)
Q Consensus 198 ~~aDiVilaVp~~~---------------~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~ 262 (460)
++||+||+|||... +.+++++|.+.++++++||++++ +.+.+.+.+.+.+.+. +.....+.+.
T Consensus 81 ~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ST-v~~g~~~~l~~~l~~~-~~~~~d~~V~ 158 (467)
T 2q3e_A 81 KEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKST-VPVRAAESIRRIFDAN-TKPNLNLQVL 158 (467)
T ss_dssp HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSC-CCTTHHHHHHHHHHHT-CCTTCEEEEE
T ss_pred hcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCc-CCchHHHHHHHHHHHh-CCCCCCeEEE
Confidence 99999999998643 46778889998999999988875 6666655666666654 2222456778
Q ss_pred ECcccHHHHh----ccCCeEEEEcc----CCHHHHHHHHHHHhcC-CceEEEcCChHHHHHHHHHHHHHHHHHHHHhccc
Q 012596 263 SGPSFALELM----NKLPTAMVVAS----KDRKLANAVQQLLASK-HLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMN 333 (460)
Q Consensus 263 ~gP~~a~e~~----~g~~~~i~i~~----~d~~~~~~l~~lL~~~-g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~k 333 (460)
.+|.+..+.. ...+..+++++ .+.+..++++++|+.. +..+....++...+|.|++.|
T Consensus 159 ~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N------------- 225 (467)
T 2q3e_A 159 SNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAAN------------- 225 (467)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHH-------------
T ss_pred eCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHH-------------
Confidence 8998765321 12333456666 3678899999999987 655566667777777776665
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhh
Q 012596 334 LGNNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVST 413 (460)
Q Consensus 334 l~~n~~~al~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd 413 (460)
.+.++..++++|+..+|++.|++++++.+..+....+ . ...+.+|..+ .|.. ..||
T Consensus 226 ----~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~~~----~--~~~~~pg~g~-gg~c-------------~~kD 281 (467)
T 2q3e_A 226 ----AFLAQRISSINSISALCEATGADVEEVATAIGMDQRI----G--NKFLKASVGF-GGSC-------------FQKD 281 (467)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTSTTT----C--SSSCCCCSCC-CSSS-------------HHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCCCC----C--ccccCCCCCC-CCcc-------------HHHH
Confidence 3466778899999999999999998887653221100 0 0011111101 1122 2389
Q ss_pred HHHHHHHHHHcCCC--ChHHHHHHHH
Q 012596 414 AGAVIALAQKYNVK--MPVLTAVARI 437 (460)
Q Consensus 414 ~g~vv~lA~~~gv~--~P~~~~v~~l 437 (460)
.++++..|+++|++ .++.+++.++
T Consensus 282 ~~~l~~~a~~~g~~~~~~~~~~~~~~ 307 (467)
T 2q3e_A 282 VLNLVYLCEALNLPEVARYWQQVIDM 307 (467)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 99999999999997 5666665544
No 48
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.86 E-value=6.6e-22 Score=208.40 Aligned_cols=269 Identities=12% Similarity=0.058 Sum_probs=181.3
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc---CCCcEEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL---LGADYCL 204 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~---~~aDiVi 204 (460)
|||+|||+|.||+.+|..|+++| ++|++|+|++++++.+.+... ++ .++..++++++++ +++|+||
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G--~~V~v~dr~~~~~~~l~~~~~-----~g----~gi~~~~~~~e~v~~l~~aDvVi 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG--FVVCAFNRTVSKVDDFLANEA-----KG----TKVLGAHSLEEMVSKLKKPRRII 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSTHHHHHHHHTTT-----TT----SSCEECSSHHHHHHHBCSSCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHhccc-----cC----CCeEEeCCHHHHHhhccCCCEEE
Confidence 68999999999999999999999 899999999999998876210 01 1345677888876 4899999
Q ss_pred Eccchh-cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012596 205 HAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (460)
Q Consensus 205 laVp~~-~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~ 283 (460)
+|||+. .++++++++.+.++++++||++++|...++ ..+.+.+.+. | +.++.+|....+...+.+..++.+
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~-~~l~~~l~~~-g-----~~~v~~pv~g~~~~a~~g~~i~~g- 143 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDT-MRRCRDLKDK-G-----ILFVGSGVSGGEDGARYGPSLMPG- 143 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHH-HHHHHHHHHT-T-----CEEEEEEEESHHHHHHHCCEEEEE-
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHH-HHHHHHHHHc-C-----CeEeCCCCCCChhhhccCCeEEeC-
Confidence 999985 799999999999999999999999876543 2334444432 2 234455554443322222344444
Q ss_pred CCHHHHHHHHHHHhcCCceE-------EEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH
Q 012596 284 KDRKLANAVQQLLASKHLRI-------STSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATK 356 (460)
Q Consensus 284 ~d~~~~~~l~~lL~~~g~~v-------~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a 356 (460)
++.+..+.++++|+..+.++ .+.++. |.+..+|+.+|....+..+++.|+..++++
T Consensus 144 g~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~-----------------g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~ 206 (482)
T 2pgd_A 144 GNKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDD-----------------GAGHFVKMVHNGIEYGDMQLICEAYHLMKD 206 (482)
T ss_dssp ECTTTHHHHHHHHHHHSCBCTTSCBSCCCCEET-----------------THHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhhccCCCcceEEECCC-----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46788899999999887765 222221 333445556677778889999999999999
Q ss_pred c-CCCccccccccC---CCceeeecccCCCccchHHHHhhCC-----CChHHHHhhcccceehhhhHHHHHHHHHHcCCC
Q 012596 357 M-GAKPATITGLSG---TGDIMLTCFVNLSRNRTVGVRLGSG-----EKLDDILSSMNQVAEGVSTAGAVIALAQKYNVK 427 (460)
Q Consensus 357 ~-Gi~~~~~~~~~~---~gd~~~t~~s~~srn~~~g~~l~~g-----~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~ 427 (460)
. |++++++.++.. .++ +.+...+++ ...+..+ ..++.+. ......++.+.++++|+++|++
T Consensus 207 ~~G~~~~~~~~~~~~w~~g~----~~S~l~~~~--~~~l~~~d~~~~~~ld~i~----d~~~~k~t~~~~~~~A~~~Gv~ 276 (482)
T 2pgd_A 207 VLGLGHKEMAKAFEEWNKTE----LDSFLIEIT--ASILKFQDADGKHLLPKIR----DSAGQKGTGKWTAISALEYGVP 276 (482)
T ss_dssp TSCCCHHHHHHHHHHHTTTT----TCBHHHHHH--HHHHHCBCTTSSBSGGGSC----CCCCCCSHHHHHHHHHHHHTCC
T ss_pred cCCcCHHHHHHHHHHhcCCC----cCchHHHHH--hHHhhccCCCCCeeecccc----cccccccHHHHHHHHHHHcCCC
Confidence 9 999887766421 121 111111111 1112211 2222221 1111235567899999999999
Q ss_pred ChHHH-HHHHHHhcCC
Q 012596 428 MPVLT-AVARIIDNEL 442 (460)
Q Consensus 428 ~P~~~-~v~~ll~~~~ 442 (460)
+|+++ .+|+.+....
T Consensus 277 ~P~i~~av~~~~~s~~ 292 (482)
T 2pgd_A 277 VTLIGEAVFARCLSSL 292 (482)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHhhhhh
Confidence 99995 7888875443
No 49
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.86 E-value=2.7e-21 Score=199.99 Aligned_cols=262 Identities=13% Similarity=0.107 Sum_probs=178.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-------CCCceEEeCCHHhhcC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-------LPENVIATTDAKTALL 198 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~-------l~~~i~a~~~~~ea~~ 198 (460)
...|..|||+|.||.+||..|+++| ++|++||+++++++.+++. ..+.|.++.. .+.++.+++++ +
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G--~~V~~~D~~~~kv~~L~~g-~~pi~epgl~~ll~~~~~~g~l~~ttd~----~ 82 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHG--VDVLGVDINQQTIDKLQNG-QISIEEPGLQEVYEEVLSSGKLKVSTTP----E 82 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTT-CCSSCCTTHHHHHHHHHHTTCEEEESSC----C
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHCC-CCCcCCCCHHHHHHhhcccCceEEeCch----h
Confidence 3579999999999999999999999 9999999999999999874 3455655542 14567887763 5
Q ss_pred CCcEEEEccchhc------------HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC-CCCEEEEECc
Q 012596 199 GADYCLHAMPVQF------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP-RQPFIALSGP 265 (460)
Q Consensus 199 ~aDiVilaVp~~~------------~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~-~~~~~v~~gP 265 (460)
+||+||+|||+.. +..+.++|.+.++++++||..+ ++.+.+.+.+.+.+.+..|.. ...+.++++|
T Consensus 83 ~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~S-TV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~P 161 (431)
T 3ojo_A 83 ASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVES-TIAPKTMDDFVKPVIENLGFTIGEDIYLVHCP 161 (431)
T ss_dssp CCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECS-CCCTTHHHHTHHHHHHTTTCCBTTTEEEEECC
T ss_pred hCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEec-CCChhHHHHHHHHHHHHcCCCcCCCeEEEECC
Confidence 7999999999754 6777789999999999988877 699988777777665543421 2457899999
Q ss_pred ccHHHHh----ccCCeEEEEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHH
Q 012596 266 SFALELM----NKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (460)
Q Consensus 266 ~~a~e~~----~g~~~~i~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~a 341 (460)
.+..+.. ...+..+ ++|.+.+.+++++++|+..+-......++...+..| +.+|.+.+
T Consensus 162 e~~~~G~A~~~~~~p~~I-v~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~K-----------------l~~N~~~a 223 (431)
T 3ojo_A 162 ERVLPGKILEELVHNNRI-IGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSK-----------------LMENTYRD 223 (431)
T ss_dssp CCCCTTSHHHHHHHSCEE-EEESSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHH-----------------HHHHHHHH
T ss_pred CcCCCcchhhcccCCCEE-EEeCCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHH-----------------HHHHHHHH
Confidence 8754321 1234455 555688999999999998765444445665555444 45566778
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHH
Q 012596 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALA 421 (460)
Q Consensus 342 l~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA 421 (460)
+..++++|+..+|+++|+|++.+.+..+...-+ ..+.+|.-+ .|.++ .||..+++..|
T Consensus 224 ~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ri--------~~l~pG~G~-GG~C~-------------pkD~~~L~~~a 281 (431)
T 3ojo_A 224 VNIALANELTKICNNLNINVLDVIEMANKHPRV--------NIHQPGPGV-GGHCL-------------AVDPYFIIAKD 281 (431)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTC--------CCCCCCSCC-CCCCB-------------CSCC-------
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHccCCCc--------ccCCCCCCc-cccch-------------hhhHHHHHHHH
Confidence 889999999999999999998887653321111 011111111 22332 25667777888
Q ss_pred HHcCCCChHHHHHHHHH
Q 012596 422 QKYNVKMPVLTAVARII 438 (460)
Q Consensus 422 ~~~gv~~P~~~~v~~ll 438 (460)
+++| ++.+++.++-
T Consensus 282 ~~~~---~li~~~~~iN 295 (431)
T 3ojo_A 282 PENA---KLIQTGREIN 295 (431)
T ss_dssp --CC---HHHHHHHHHH
T ss_pred HHHh---HHHHHHHHHH
Confidence 8777 7777777653
No 50
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.86 E-value=2.7e-21 Score=202.68 Aligned_cols=265 Identities=12% Similarity=0.077 Sum_probs=179.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC---CCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL---GADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~---~aDi 202 (460)
.+|||+|||+|.||..||.+|+++| ++|++|||++++++.+.+.+.. + .++..+.+++++++ ++|+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~g~~-----g----~~i~~~~s~~e~v~~l~~aDv 71 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHG--FVVCAFNRTVSKVDDFLANEAK-----G----TKVVGAQSLKEMVSKLKKPRR 71 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSTHHHHHHHHTTTT-----T----SSCEECSSHHHHHHTBCSSCE
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhcccC-----C----CceeccCCHHHHHhhccCCCE
Confidence 4689999999999999999999999 9999999999999998876431 0 12445678888765 5999
Q ss_pred EEEccchh-cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHh--ccCCeEE
Q 012596 203 CLHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELM--NKLPTAM 279 (460)
Q Consensus 203 VilaVp~~-~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~--~g~~~~i 279 (460)
||++||.. .++++++++.+.++++++||+++++...++ ..+.+.+.+. |. .++.+|..+.+.. .|. .+
T Consensus 72 Vil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t-~~~~~~l~~~-Gi-----~fvd~pVsGg~~gA~~G~--~i 142 (484)
T 4gwg_A 72 IILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDT-TRRCRDLKAK-GI-----LFVGSGVSGGEEGARYGP--SL 142 (484)
T ss_dssp EEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HHHHHHHHHT-TC-----EEEEEEEESHHHHHHHCC--EE
T ss_pred EEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHH-HHHHHHHHhh-cc-----ccccCCccCCHHHHhcCC--ee
Confidence 99999985 789999999999999999999998665443 3333444432 32 2334444333221 233 44
Q ss_pred EEccCCHHHHHHHHHHHhcCCceE-------EEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHH
Q 012596 280 VVASKDRKLANAVQQLLASKHLRI-------STSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRW 352 (460)
Q Consensus 280 ~i~~~d~~~~~~l~~lL~~~g~~v-------~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~ 352 (460)
+++ ++.+.+++++++|+..+.++ .+.++. |.+..+|+.+|.+.....++++|+..
T Consensus 143 m~G-G~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~-----------------Gag~~vKmv~N~i~~~~m~~iaEa~~ 204 (484)
T 4gwg_A 143 MPG-GNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDE-----------------GAGHFVKMVHNGIEYGDMQLICEAYH 204 (484)
T ss_dssp EEE-ECGGGHHHHHHHHHHHSCBCTTSCBSBCCCEET-----------------THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecC-CCHHHHHHHHHHHHHhcCcccCCCceEEEECCc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 57888999999999766554 333321 45566677788888889999999999
Q ss_pred HHHH-cCCCcccccccc---CCCceeeecccCCCccchHHHHhh----CC-CChHHHHhhcccceehhhhHHHHHHHHHH
Q 012596 353 LATK-MGAKPATITGLS---GTGDIMLTCFVNLSRNRTVGVRLG----SG-EKLDDILSSMNQVAEGVSTAGAVIALAQK 423 (460)
Q Consensus 353 la~a-~Gi~~~~~~~~~---~~gd~~~t~~s~~srn~~~g~~l~----~g-~~~e~~~~~~~~~~eg~kd~g~vv~lA~~ 423 (460)
++++ +|++++++.++. ..|. +.|...+++ ...+. .| ..++.+....++.-+|. -.+..|.+
T Consensus 205 l~~~~~Gld~~~l~~v~~~w~~G~----~~S~l~e~~--~~~l~~~D~~g~~~ld~i~d~~~~kgtG~----wt~~~A~~ 274 (484)
T 4gwg_A 205 LMKDVLGMAQDEMAQAFEDWNKTE----LDSFLIEIT--ANILKFQDTDGKHLLPKIRDSAGQKGTGK----WTAISALE 274 (484)
T ss_dssp HHHHTSCCCHHHHHHHHHHHTTTT----TCBHHHHHH--HHHHHCBCTTSSBSGGGSCCCCCSSCTTH----HHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHcCCC----ccchHHHHH--HHHHhcCCccCCccHHHHhccccCcchHH----HHHHHHHH
Confidence 9999 999998876642 1111 011111111 12222 12 23555554445555553 33556779
Q ss_pred cCCCCh-HHHHHHHHH
Q 012596 424 YNVKMP-VLTAVARII 438 (460)
Q Consensus 424 ~gv~~P-~~~~v~~ll 438 (460)
+|+|+| +.++++..+
T Consensus 275 ~gvp~p~i~~av~~R~ 290 (484)
T 4gwg_A 275 YGVPVTLIGEAVFARC 290 (484)
T ss_dssp HTCCCHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHH
Confidence 999999 445666554
No 51
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.9e-21 Score=203.86 Aligned_cols=260 Identities=10% Similarity=0.048 Sum_probs=175.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-hcCCCccCCCCCCCCceEEeCCHHhhcCC---CcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE-KHCNCRYFPEQKLPENVIATTDAKTALLG---ADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~-~g~~~~~~~~~~l~~~i~a~~~~~ea~~~---aDi 202 (460)
..+|+|||+|.||++||.+|+++| ++|++|+|++++++.+.+ ... + .++..+++++++++. +|+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G--~~V~v~dr~~~~~~~l~~~~~~------~----~gi~~~~s~~e~v~~l~~aDv 77 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHG--FTVCAYNRTQSKVDHFLANEAK------G----KSIIGATSIEDFISKLKRPRK 77 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSHHHHHHHHTTTT------T----SSEECCSSHHHHHHTSCSSCE
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHccccc------C----CCeEEeCCHHHHHhcCCCCCE
Confidence 468999999999999999999999 999999999999998876 210 0 135566788887766 999
Q ss_pred EEEccch-hcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEE
Q 012596 203 CLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (460)
Q Consensus 203 VilaVp~-~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i 281 (460)
||+|||+ ..++++++++.+.++++++||+++++....+ ..+.+.+.+. |. .++.+|....+...+.++.++.
T Consensus 78 Vil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~-~~l~~~l~~~-g~-----~~v~~pVsgg~~~a~~G~~im~ 150 (497)
T 2p4q_A 78 VMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDS-NRRYEELKKK-GI-----LFVGSGVSGGEEGARYGPSLMP 150 (497)
T ss_dssp EEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HHHHHHHHHT-TC-----EEEEEEEESHHHHHHHCCEEEE
T ss_pred EEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHH-HHHHHHHHHc-CC-----ceeCCCcccChhHhhcCCeEEe
Confidence 9999998 5899999999999999999999998765443 3344445432 32 2333343332221111223444
Q ss_pred ccCCHHHHHHHHHHHhcCCce------EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHH
Q 012596 282 ASKDRKLANAVQQLLASKHLR------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLAT 355 (460)
Q Consensus 282 ~~~d~~~~~~l~~lL~~~g~~------v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~ 355 (460)
+++.+.+++++++|+..+.+ +.+.++. |.+..+|+.+|.+.....++++|+..+++
T Consensus 151 -gg~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~-----------------G~g~~~Kl~~N~~~~~~~~~laEa~~l~~ 212 (497)
T 2p4q_A 151 -GGSEEAWPHIKNIFQSISAKSDGEPCCEWVGPA-----------------GAGHYVKMVHNGIEYGDMQLICEAYDIMK 212 (497)
T ss_dssp -EECGGGHHHHHHHHHHHSCEETTEESCCCCEET-----------------THHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHhcCccCCCCceEEECCc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788899999999988776 3333321 33444556677777888999999999999
Q ss_pred H-cCCCccccccccC---CCceeeecccCCCccchHHHHhhCC-----CChHHHHhhcccceehhhhHH-HHHHHHHHcC
Q 012596 356 K-MGAKPATITGLSG---TGDIMLTCFVNLSRNRTVGVRLGSG-----EKLDDILSSMNQVAEGVSTAG-AVIALAQKYN 425 (460)
Q Consensus 356 a-~Gi~~~~~~~~~~---~gd~~~t~~s~~srn~~~g~~l~~g-----~~~e~~~~~~~~~~eg~kd~g-~vv~lA~~~g 425 (460)
+ +|++++++.++.. .|+. .+...+++ +..+.++ ..++.+. -..+.|+.+ .+++.|+++|
T Consensus 213 ~~lGl~~~~~~~~~~~w~~g~~----~S~l~~~~--~~~l~~~d~~~~~~vd~i~-----D~~~~KgtG~~~~~~A~~~G 281 (497)
T 2p4q_A 213 RLGGFTDKEISDVFAKWNNGVL----DSFLVEIT--RDILKFDDVDGKPLVEKIM-----DTAGQKGTGKWTAINALDLG 281 (497)
T ss_dssp HTTCCCHHHHHHHHHHHHTTTT----CBHHHHHH--HHHHTCBCTTSSBGGGGSC-----CCCCCCSHHHHHHHHHHHHT
T ss_pred HccCCCHHHHHHHHHHhcCCcc----ccHHHHHH--HHHHhcCCCCCccHHHHHH-----HhhccchHHHHHHHHHHHcC
Confidence 9 6999988776421 1110 01111111 1223222 1222111 112336666 6889999999
Q ss_pred CCChHHHHH
Q 012596 426 VKMPVLTAV 434 (460)
Q Consensus 426 v~~P~~~~v 434 (460)
+++|+.+..
T Consensus 282 v~~P~~~~a 290 (497)
T 2p4q_A 282 MPVTLIGEA 290 (497)
T ss_dssp CCCHHHHHH
T ss_pred CCCchHHHH
Confidence 999999873
No 52
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.85 E-value=3e-21 Score=199.37 Aligned_cols=269 Identities=20% Similarity=0.183 Sum_probs=180.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--C---CCceEEeCCHHhhcCCC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L---PENVIATTDAKTALLGA 200 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~--l---~~~i~a~~~~~ea~~~a 200 (460)
.+|||+|||+|.||.++|..|++ | ++|++||+++++++.+++. ....+.++.. + ..++.+++|+++++++|
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G--~~V~~~D~~~~~v~~l~~g-~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a 110 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-N--HEVVALDIVQAKVDMLNQK-ISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA 110 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-T--SEEEEECSCHHHHHHHHTT-CCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-C--CeEEEEecCHHHhhHHhcc-CCccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence 46899999999999999999998 8 9999999999999998873 3333322211 0 23578899998999999
Q ss_pred cEEEEccchh-----------cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHH
Q 012596 201 DYCLHAMPVQ-----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFAL 269 (460)
Q Consensus 201 DiVilaVp~~-----------~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~ 269 (460)
|+||+|||+. .+++++++|.+ ++++++||..+ ++.+.+.+.+.+.+.+. .+.+.|.+..
T Consensus 111 DvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S-Tv~pgtt~~l~~~l~~~--------~v~~sPe~~~ 180 (432)
T 3pid_A 111 DYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS-TIPVGFTRDIKERLGID--------NVIFSPEFLR 180 (432)
T ss_dssp SEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS-CCCTTHHHHHHHHHTCC--------CEEECCCCCC
T ss_pred CEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC-CCChHHHHHHHHHHhhc--------cEeecCccCC
Confidence 9999999975 47888889988 89999999877 48887765555544321 2455777755
Q ss_pred HHh--c--cCCeEEEEccCCHHHHHHHHHHHhc--C--CceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHH
Q 012596 270 ELM--N--KLPTAMVVASKDRKLANAVQQLLAS--K--HLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (460)
Q Consensus 270 e~~--~--g~~~~i~i~~~d~~~~~~l~~lL~~--~--g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~a 341 (460)
+.. . -.+..+++|+ +.+.++++.++|.. . +..+.. .++...++.| +.+|.+.+
T Consensus 181 ~G~A~~~~l~p~rIvvG~-~~~~~~~~~~ll~~~~~~~~~~v~~-~~~~~AE~~K-----------------l~~N~~~a 241 (432)
T 3pid_A 181 EGRALYDNLHPSRIVIGE-RSARAERFADLLKEGAIKQDIPTLF-TDSTEAEAIK-----------------LFANTYLA 241 (432)
T ss_dssp TTSHHHHHHSCSCEEESS-CSHHHHHHHHHHHHHCSSSSCCEEE-CCHHHHHHHH-----------------HHHHHHHH
T ss_pred cchhhhcccCCceEEecC-CHHHHHHHHHHHHhhhccCCCeEEe-cCccHHHHHH-----------------HHHHHHHH
Confidence 421 1 1233455554 56678899999985 2 234444 3555555544 44566777
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHH
Q 012596 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALA 421 (460)
Q Consensus 342 l~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA 421 (460)
+..++++|+..+|+++|+|++++.+..+....+-..+ + .+|.-+ .|.++. ||..+++.
T Consensus 242 ~~Ia~~nEl~~lae~~GiD~~~v~~~~~~dprig~~~-----~-~pg~G~-GG~C~p-------------kD~~~L~~-- 299 (432)
T 3pid_A 242 LRVAYFNELDSYAESQGLNSKQIIEGVCLDPRIGNHY-----N-NPSFGY-GGYCLP-------------KDTKQLLA-- 299 (432)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTTCSSS-----C-CCCSCC-CTTTHH-------------HHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHccCCCCCccc-----C-CCCCCC-cccchh-------------hhHHHHHH--
Confidence 8899999999999999999988876532211000000 0 011111 234442 56666653
Q ss_pred HHcCCCChHHHHHHHHHhcCCCHHHHHHHH
Q 012596 422 QKYNVKMPVLTAVARIIDNELTPKKAVLEL 451 (460)
Q Consensus 422 ~~~gv~~P~~~~v~~ll~~~~~~~~~~~~l 451 (460)
+..|++.++.+++.++- +..++-.++.+
T Consensus 300 ~~~~~~~~li~~~~~~N--~~~~~~v~~~i 327 (432)
T 3pid_A 300 NYESVPNNIIAAIVDAN--RTRKDFIADSI 327 (432)
T ss_dssp HTTTSCCSHHHHHHHHH--HHHHHHHHHHH
T ss_pred HhcCCchhHHHHHHHHH--HhhHHHHHHHH
Confidence 34688999998888763 33344444443
No 53
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.85 E-value=3.2e-21 Score=186.92 Aligned_cols=243 Identities=11% Similarity=0.132 Sum_probs=160.7
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r--~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
|||+|||+|+||.+||..|+++| ++|++|+| +++.++.+.+.|. . ++++++++++|+||+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g--~~V~~~~~~~~~~~~~~~~~~g~--------------~--~~~~~~~~~aDvvi~ 62 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG--VEVVTSLEGRSPSTIERARTVGV--------------T--ETSEEDVYSCPVVIS 62 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CEEEECCTTCCHHHHHHHHHHTC--------------E--ECCHHHHHTSSEEEE
T ss_pred CeEEEEechHHHHHHHHHHHHCC--CeEEEeCCccCHHHHHHHHHCCC--------------c--CCHHHHHhcCCEEEE
Confidence 68999999999999999999999 89999999 7777887776552 2 366777889999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC-CCCEEEEECcccHHHHhccCCeEEEEccC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP-RQPFIALSGPSFALELMNKLPTAMVVASK 284 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~-~~~~~v~~gP~~a~e~~~g~~~~i~i~~~ 284 (460)
|||.+.....+.++.+.+++ ++|+++ ++.+.+.+. +.+.++.. +....+..+|. ....|.. +++++.
T Consensus 63 ~v~~~~~~~~~~~~~~~~~~--~vi~~s-~~~~~~~~~----l~~~~~~~g~~~~~v~~~~~---~~~~g~~--~~~~g~ 130 (264)
T 1i36_A 63 AVTPGVALGAARRAGRHVRG--IYVDIN-NISPETVRM----ASSLIEKGGFVDAAIMGSVR---RKGADIR--IIASGR 130 (264)
T ss_dssp CSCGGGHHHHHHHHHTTCCS--EEEECS-CCCHHHHHH----HHHHCSSSEEEEEEECSCHH---HHGGGCE--EEEEST
T ss_pred ECCCHHHHHHHHHHHHhcCc--EEEEcc-CCCHHHHHH----HHHHHhhCCeeeeeeeCCcc---ccccCCe--EEecCC
Confidence 99987654555778777765 778775 565543323 33433321 11222333332 2223432 445554
Q ss_pred CHHHHHHHHHHHhcCCceEEEcCC-hHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012596 285 DRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (460)
Q Consensus 285 d~~~~~~l~~lL~~~g~~v~~~~D-i~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~~ 363 (460)
+. +++++ |+..|.++...++ +....|.|+..|. .......++.|+..++++.|++++
T Consensus 131 ~~---~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~-----------------~~~~~~~~~~Ea~~la~~~G~~~~- 188 (264)
T 1i36_A 131 DA---EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSS-----------------YTKGVSALLWETLTAAHRLGLEED- 188 (264)
T ss_dssp TH---HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHTTCHHH-
T ss_pred cH---HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHcCCcHH-
Confidence 43 78888 9999988766554 5555666655543 344567899999999999999976
Q ss_pred cccc-cC-CC-ceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHhc
Q 012596 364 ITGL-SG-TG-DIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDN 440 (460)
Q Consensus 364 ~~~~-~~-~g-d~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~~ 440 (460)
..+. .. .+ +....+.+. ...+...|++ ..||++.++++++++ +++|+++.++++++.
T Consensus 189 ~~~~~~~~~g~~~~~~~~~~------~~~~~~~g~~-------------~~~~~~~~~~~a~~~-v~~p~~~~v~~~~~~ 248 (264)
T 1i36_A 189 VLEMLEYTEGNDFRESAISR------LKSSCIHARR-------------RYEEMKEVQDMLAEV-IDPVMPTCIIRIFDK 248 (264)
T ss_dssp HHHHHHTTSCSSTHHHHHHH------HHHHHHTHHH-------------HHHHHHHHHHHHHTT-SCCSHHHHHHHHHHH
T ss_pred HHHHHHHhcCccHHHHHHHH------hcCCCCcchh-------------hHHHHHHHHHHHHHh-cCchHHHHHHHHHHH
Confidence 4432 11 11 111000000 0111211111 348999999999999 999999999999875
Q ss_pred CC
Q 012596 441 EL 442 (460)
Q Consensus 441 ~~ 442 (460)
..
T Consensus 249 ~~ 250 (264)
T 1i36_A 249 LK 250 (264)
T ss_dssp HC
T ss_pred HH
Confidence 43
No 54
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.84 E-value=6.1e-20 Score=189.14 Aligned_cols=260 Identities=17% Similarity=0.153 Sum_probs=178.4
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-----CCCceEEeCCHHhhcCCCcE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-----LPENVIATTDAKTALLGADY 202 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~-----l~~~i~a~~~~~ea~~~aDi 202 (460)
|||+|||+|+||.++|..|++ | ++|++|||++++++.+++.+.... .++.. .+.++.+++++.++++++|+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G--~~V~~~d~~~~~~~~l~~~~~~i~-e~~l~~~~~~~~~~l~~t~~~~~~~~~aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q--NEVTIVDILPSKVDKINNGLSPIQ-DEYIEYYLKSKQLSIKATLDSKAAYKEAEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T--SEEEEECSCHHHHHHHHTTCCSSC-CHHHHHHHHHSCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHhC-C--CEEEEEECCHHHHHHHHcCCCCcC-CCCHHHHHHhccCcEEEeCCHHHHhcCCCE
Confidence 689999999999999999999 8 999999999999999987654211 00000 02246778888888889999
Q ss_pred EEEccchh-----------cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH
Q 012596 203 CLHAMPVQ-----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL 271 (460)
Q Consensus 203 VilaVp~~-----------~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~ 271 (460)
||+|||+. .+.++++++.+ ++++++||..+. +.+.+.+ .+.+.++.. .+.++|.+..+.
T Consensus 77 viiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST-~~~g~~~----~l~~~~~~~----~v~~~Pe~~~~G 146 (402)
T 1dlj_A 77 VIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKST-IPIGFIT----EMRQKFQTD----RIIFSPEFLRES 146 (402)
T ss_dssp EEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSC-CCTTHHH----HHHHHTTCS----CEEECCCCCCTT
T ss_pred EEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCC-CCccHHH----HHHHHhCCC----eEEECCccccCc
Confidence 99999986 48899999988 888999887442 4444333 333444431 456778765432
Q ss_pred h----ccCCeEEEEccCCH------HHHHHHHHHHhcCCce---EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcH
Q 012596 272 M----NKLPTAMVVASKDR------KLANAVQQLLASKHLR---ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNS 338 (460)
Q Consensus 272 ~----~g~~~~i~i~~~d~------~~~~~l~~lL~~~g~~---v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~ 338 (460)
. ...+..+++|+.+. +.++.+.++|...++. +....|+...+|.|++.|.+
T Consensus 147 ~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~---------------- 210 (402)
T 1dlj_A 147 KALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTY---------------- 210 (402)
T ss_dssp STTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHH----------------
T ss_pred chhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHH----------------
Confidence 1 12233456666541 6678899999764443 46667899999999888753
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCccchHHHHhhCCCChHHHHhhcccceehhhhHHHHH
Q 012596 339 MAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVI 418 (460)
Q Consensus 339 ~~al~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv 418 (460)
.++..++++|+..+|++.|+|++++.+..+....+ . .+.+.+|..+ .|.. ..||.++++
T Consensus 211 -~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~ri----~--~~~~~pg~g~-gg~c-------------~~kD~~~l~ 269 (402)
T 1dlj_A 211 -LALRVAYFNELDTYAESRKLNSHMIIQGISYDDRI----G--MHYNNPSFGY-GGYS-------------LPKDTKQLL 269 (402)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTT----C--SSSCCCCSSC-CSSH-------------HHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHhCCCHHHHHHHhccCCCC----C--cCCCCCCCcc-CCcc-------------HHhhHHHHH
Confidence 45567889999999999999998887653322111 0 0000111101 1111 238899999
Q ss_pred HHHHHcCCCChHHHHHHHHHhc
Q 012596 419 ALAQKYNVKMPVLTAVARIIDN 440 (460)
Q Consensus 419 ~lA~~~gv~~P~~~~v~~ll~~ 440 (460)
..|+ |+++|+.+++.++-..
T Consensus 270 ~~a~--~~~~~l~~~~~~~N~~ 289 (402)
T 1dlj_A 270 ANYN--NIPQTLIEAIVSSNNV 289 (402)
T ss_dssp HHHT--TSSCSHHHHHHHHHHH
T ss_pred HHhc--CCChHHHHHHHHHHHH
Confidence 8885 9999999999887543
No 55
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.82 E-value=1.1e-18 Score=180.54 Aligned_cols=279 Identities=17% Similarity=0.185 Sum_probs=197.6
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-------CCCceEEeCCHHhhcC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-------LPENVIATTDAKTALL 198 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~-------l~~~i~a~~~~~ea~~ 198 (460)
+|.+|+|||+|.||..+|..|++.| ++|+.+|.++++++.+++ |..+.+.++.. -..++.++++.+++++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G--~~V~g~Did~~kV~~ln~-G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~ 96 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLG--HRVVGYDVNPSIVERLRA-GRPHIYEPGLEEALGRALSSGRLSFAESAEEAVA 96 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSCHHHHHHHHT-TCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCC--CcEEEEECCHHHHHHHHC-CCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHh
Confidence 4679999999999999999999999 999999999999999987 44444555432 1356889999999999
Q ss_pred CCcEEEEccchh----------cHHHHHHHhhhcCC---CCCeEEEeccCCccchhhhHH-HHHHHHhCCCCCCEEEEEC
Q 012596 199 GADYCLHAMPVQ----------FSSSFLEGISDYVD---PGLPFISLSKGLELNTLRMMS-QIIPQALRNPRQPFIALSG 264 (460)
Q Consensus 199 ~aDiVilaVp~~----------~~~~vl~~i~~~l~---~~~iIV~~~~Gi~~~~~~~l~-e~l~~~lg~~~~~~~v~~g 264 (460)
.+|++|+|||+. .+..+.+.|.++++ ++++||.-++ +.+.+.+.+. ..+.+..+. ..+.+.+.
T Consensus 97 ~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eST-VppGtte~~~~~~l~~~~~~--~~f~v~~~ 173 (444)
T 3vtf_A 97 ATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKST-VPPGTTEGLVARAVAEEAGG--VKFSVASN 173 (444)
T ss_dssp TSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSC-CCTTTTTTHHHHHHHTTTTT--CCCEEEEC
T ss_pred cCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCC-CCCchHHHHHHHHHHHhCCC--CCceeecC
Confidence 999999999852 46777788887775 4567776664 8887766543 445444333 45778899
Q ss_pred cccHHHHh----ccCCeEEEEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHH
Q 012596 265 PSFALELM----NKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMA 340 (460)
Q Consensus 265 P~~a~e~~----~g~~~~i~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~ 340 (460)
|.+..+.. ...+..+++|+.++...+.+.++++.....+..+ ++...|..|++ .|.+.
T Consensus 174 PErl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~~~~-~~~~AE~~Kl~-----------------eN~~r 235 (444)
T 3vtf_A 174 PEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPKLVM-KPREAELVKYA-----------------SNVFL 235 (444)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCEEEE-CHHHHHHHHHH-----------------HHHHH
T ss_pred cccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCCEEEe-chhHHHHHHHH-----------------HHHHH
Confidence 98765421 1234556778888888899999998766555543 55666666544 45667
Q ss_pred HHHHHHHHHHHHHHHHcCCCccccccccCCCceeeecccCCCcc-chHHHHhhCCCChHHHHhhcccceehhhhHHHHHH
Q 012596 341 ALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRN-RTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIA 419 (460)
Q Consensus 341 al~~~~~~E~~~la~a~Gi~~~~~~~~~~~gd~~~t~~s~~srn-~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~vv~ 419 (460)
++..+.++|+..+|+++|+|...+.+.++....+ ..+ +.+|.-+ .|.++. ||..+++.
T Consensus 236 avnIa~~NEla~ice~~GiDv~eV~~a~~~d~ri-------g~~~l~PG~G~-GG~Cip-------------kD~~~L~~ 294 (444)
T 3vtf_A 236 ALKISFANEVGLLAKRLGVDTYRVFEAVGLDKRI-------GRHYFGAGLGF-GGSCFP-------------KDTLAFIR 294 (444)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTS-------CSTTCCCSSCC-CTTTHH-------------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCC-------CCCCCCCCCCC-CCcccC-------------cCHHHHHH
Confidence 7888999999999999999987776543221000 111 1112111 244442 78899999
Q ss_pred HHHHcCCCChHHHHHHHHHhcCCCHHHHHHHH
Q 012596 420 LAQKYNVKMPVLTAVARIIDNELTPKKAVLEL 451 (460)
Q Consensus 420 lA~~~gv~~P~~~~v~~ll~~~~~~~~~~~~l 451 (460)
.|+++|++.++.+++.++-.. .+.-+++.+
T Consensus 295 ~a~~~g~~~~li~a~~~iN~~--~~~~vv~~l 324 (444)
T 3vtf_A 295 FGESLGLEMAISKAVLRVNEY--MPRYAVQLL 324 (444)
T ss_dssp HHHHTTCCCHHHHHHHHHHHH--HHHHHHHHH
T ss_pred HHHhcCCCHHHHHhhHHHHHH--HHHHHHHHH
Confidence 999999999999988876543 344444443
No 56
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.79 E-value=1.2e-18 Score=170.13 Aligned_cols=214 Identities=14% Similarity=0.161 Sum_probs=155.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEcc
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (460)
|||+|||+|.||.++|..|.+.| ++|++|+|++++++.+.+.|.. ...+++++++ +++|+||+||
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~-~~~D~vi~av 65 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG--HYLIGVSRQQSTCEKAVERQLV------------DEAGQDLSLL-QTAKIIFLCT 65 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTSC------------SEEESCGGGG-TTCSEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHhCCCC------------ccccCCHHHh-CCCCEEEEEC
Confidence 68999999999999999999999 8999999999988888765431 1245678787 8999999999
Q ss_pred chhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEE-----ECcccHH-HHhccCCeEEEE
Q 012596 208 PVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL-----SGPSFAL-ELMNKLPTAMVV 281 (460)
Q Consensus 208 p~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~-----~gP~~a~-e~~~g~~~~i~i 281 (460)
|.+.+.++++++.+.++++++|+++++ +.....+ .+.+.++ ...+.... .||.++. ++..+..+.+..
T Consensus 66 ~~~~~~~~~~~l~~~~~~~~~vv~~~~-~~~~~~~----~~~~~~~-~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~ 139 (279)
T 2f1k_A 66 PIQLILPTLEKLIPHLSPTAIVTDVAS-VKTAIAE----PASQLWS-GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTP 139 (279)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEECCS-CCHHHHH----HHHHHST-TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEECCC-CcHHHHH----HHHHHhC-CEeecCcccCCccCCHHHHhHHHhCCCcEEEec
Confidence 999999999999999998999999843 4332222 2222222 11222222 2454443 233444444333
Q ss_pred c-cCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHH-HHHHHHHHhcccCCC-----cHHHHHHHHHHHHHHHHH
Q 012596 282 A-SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNV-LAIAAGIVVGMNLGN-----NSMAALVAQGCSEIRWLA 354 (460)
Q Consensus 282 ~-~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv-~ai~~g~~~~~kl~~-----n~~~al~~~~~~E~~~la 354 (460)
. +.+.+..+.++++|+..|++++..++..+.+|.++++|. ..++.++.++..... +....++..++.|+.+++
T Consensus 140 ~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~ 219 (279)
T 2f1k_A 140 TEYTDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGFRDTSRVG 219 (279)
T ss_dssp CTTCCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTGG
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcccchhccc
Confidence 3 347888999999999999999999998999999999996 566667766554433 456678888999987776
Q ss_pred HHcCCCccccc
Q 012596 355 TKMGAKPATIT 365 (460)
Q Consensus 355 ~a~Gi~~~~~~ 365 (460)
+.+|..+.
T Consensus 220 ---~~~p~~~~ 227 (279)
T 2f1k_A 220 ---GGNPELGT 227 (279)
T ss_dssp ---GSCHHHHH
T ss_pred ---CCCHHHHH
Confidence 35555444
No 57
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.78 E-value=4.8e-18 Score=169.85 Aligned_cols=262 Identities=12% Similarity=0.121 Sum_probs=164.8
Q ss_pred hccCCCeEEEECcchHHHHHHHHHHhcCC--CCeEEEEeCCHH--HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 123 ILERTNKVVVLGGGSFGTAMAAHVANKKS--QLKVYMLMRDPA--VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~~~A~~La~~G~--~~~V~v~~r~~~--~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
.|+.+|||+|||+|+||++||..|+++|. .++|++|+|+++ +++.+.+.| +.+++++.++++
T Consensus 18 ~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G--------------~~~~~~~~e~~~ 83 (322)
T 2izz_A 18 LYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMG--------------VKLTPHNKETVQ 83 (322)
T ss_dssp ----CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHT--------------CEEESCHHHHHH
T ss_pred hccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcC--------------CEEeCChHHHhc
Confidence 56667899999999999999999999872 258999999986 788887655 345667888888
Q ss_pred CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeE
Q 012596 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTA 278 (460)
Q Consensus 199 ~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~ 278 (460)
++|+||+|||.+++.++++++.+.++++++||++++|+..+ .+.+.+.+.++. ...+...|..+..+..+. .
T Consensus 84 ~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~---~l~~~l~~~~~~---~~vv~~~p~~p~~~~~g~--~ 155 (322)
T 2izz_A 84 HSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTIS---SIEKKLSAFRPA---PRVIRCMTNTPVVVREGA--T 155 (322)
T ss_dssp HCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHH---HHHHHHHTTSSC---CEEEEEECCGGGGGTCEE--E
T ss_pred cCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHH---HHHHHHhhcCCC---CeEEEEeCCcHHHHcCCe--E
Confidence 99999999999999999999999998899999999998754 344555443332 123445566655544442 3
Q ss_pred EEEccC--CHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH
Q 012596 279 MVVASK--DRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATK 356 (460)
Q Consensus 279 i~i~~~--d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a 356 (460)
++.++. +.+..+.++++|+..|..++..+|+..... ++ .|. .+.+...+..++.|+ +.+
T Consensus 156 v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~~~~~--------a~-~g~-------gpa~~~~~~eala~a---~~~ 216 (322)
T 2izz_A 156 VYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVT--------GL-SGS-------GPAYAFTALDALADG---GVK 216 (322)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGHHHHH--------HH-TTT-------HHHHHHHHHHHHHHH---HHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHHHHHH--------HH-hcC-------HHHHHHHHHHHHHHH---HHH
Confidence 333332 378889999999999988887776543211 11 111 122223334444443 678
Q ss_pred cCCCccccccccCCCceeeecccCCCccchHHHHh-hCCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHH
Q 012596 357 MGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRL-GSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVA 435 (460)
Q Consensus 357 ~Gi~~~~~~~~~~~gd~~~t~~s~~srn~~~g~~l-~~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~ 435 (460)
.|++++.+.++.. +.. .. ....+ ..|+....+.... ...-......++..++.|++.++.+.+.
T Consensus 217 ~Gl~~~~a~~l~~--~~~---~g-------~~~~~~~~~~~p~~l~~~v---~sp~g~t~~~l~~l~~~g~~~~~~~av~ 281 (322)
T 2izz_A 217 MGLPRRLAVRLGA--QAL---LG-------AAKMLLHSEQHPGQLKDNV---SSPGGATIHALHVLESGGFRSLLINAVE 281 (322)
T ss_dssp TTCCHHHHHHHHH--HHH---HH-------HHHHHHHCSSCHHHHHHHH---CCTTSHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred cCCCHHHHHHHHH--HHH---HH-------HHHHHHhcCCCHHHHHHhC---CCCCcHHHHHHHHHHHCCHHHHHHHHHH
Confidence 8999876655310 000 00 00111 1122111111000 0000123456677888999999998888
Q ss_pred HHHhc
Q 012596 436 RIIDN 440 (460)
Q Consensus 436 ~ll~~ 440 (460)
+.+..
T Consensus 282 ~~~~r 286 (322)
T 2izz_A 282 ASCIR 286 (322)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 58
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.76 E-value=2.7e-18 Score=165.04 Aligned_cols=168 Identities=18% Similarity=0.217 Sum_probs=118.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHH--------------HHHHHhhcCCCccCCCCCCCCceEEeCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAV--------------CQSINEKHCNCRYFPEQKLPENVIATTD 192 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~--------------~~~l~~~g~~~~~~~~~~l~~~i~a~~~ 192 (460)
.|||+|||+|+||.+||..|+++| ++|++|+|++++ .+.+.+.. ... .+++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-~~~~ 83 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG--HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH------------PHV-HLAA 83 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHTCC-------CCHHHHGGGS------------TTC-EEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc------------Cce-eccC
Confidence 689999999999999999999999 999999999886 33333221 011 2356
Q ss_pred HHhhcCCCcEEEEccchhcHHHHHHHh-hhcCCCCCeEEEeccCC----------ccchhhhHHHHHHHHhCCCCC--CE
Q 012596 193 AKTALLGADYCLHAMPVQFSSSFLEGI-SDYVDPGLPFISLSKGL----------ELNTLRMMSQIIPQALRNPRQ--PF 259 (460)
Q Consensus 193 ~~ea~~~aDiVilaVp~~~~~~vl~~i-~~~l~~~~iIV~~~~Gi----------~~~~~~~l~e~l~~~lg~~~~--~~ 259 (460)
+.+++++||+||+|||.+...+++.++ .+.+ ++++||+++||+ .+++...+.+.+++.++...+ .+
T Consensus 84 ~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~ 162 (245)
T 3dtt_A 84 FADVAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTL 162 (245)
T ss_dssp HHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECS
T ss_pred HHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEee
Confidence 788889999999999999988888888 7776 789999999765 344455677888887753100 00
Q ss_pred EEEECcccHHHHh-ccCCeEEEEccCCHHHHHHHHHHHhcCCce-EEEcCChH
Q 012596 260 IALSGPSFALELM-NKLPTAMVVASKDRKLANAVQQLLASKHLR-ISTSSDVT 310 (460)
Q Consensus 260 ~v~~gP~~a~e~~-~g~~~~i~i~~~d~~~~~~l~~lL~~~g~~-v~~~~Di~ 310 (460)
.++.+|....... .+.+..+++++.+.+.++.++++|+..|+. +.+.+++.
T Consensus 163 ~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~~~~~G~~g 215 (245)
T 3dtt_A 163 NTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQDVIDLGDIT 215 (245)
T ss_dssp TTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCCEEEEESGG
T ss_pred cccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCceeccCcHH
Confidence 0112222221111 122234566777899999999999999975 56666653
No 59
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.75 E-value=1.1e-17 Score=157.11 Aligned_cols=170 Identities=15% Similarity=0.204 Sum_probs=130.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
.+|||+|||+|+||+++|..|+++| ++|++|+|+++ +++++|+||+
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g--~~V~~~~~~~~--------------------------------~~~~aD~vi~ 63 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAG--HEVTYYGSKDQ--------------------------------ATTLGEIVIM 63 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT--CEEEEECTTCC--------------------------------CSSCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHH--------------------------------HhccCCEEEE
Confidence 4689999999999999999999999 89999998752 3568999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCc-cc-------hhhhHHHHHHHHhCCCCCCEEEEE------CcccHHHH
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLE-LN-------TLRMMSQIIPQALRNPRQPFIALS------GPSFALEL 271 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~-~~-------~~~~l~e~l~~~lg~~~~~~~v~~------gP~~a~e~ 271 (460)
|+|...++++++++.+.++ ++++|++++|+. ++ +...+.+.+++.++. ..++. +|.++.+.
T Consensus 64 av~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~----~~vv~~~~~~~~p~~~~~~ 138 (209)
T 2raf_A 64 AVPYPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPD----SQVLKAFNTTFAATLQSGQ 138 (209)
T ss_dssp CSCHHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTT----SEEEECSTTSCHHHHHHSE
T ss_pred cCCcHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCCC----CcEEEeeecccHhhccccc
Confidence 9999889999999988887 899999999998 33 333456777776653 12333 66666543
Q ss_pred hcc-CCeEEEEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 012596 272 MNK-LPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNN 337 (460)
Q Consensus 272 ~~g-~~~~i~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n 337 (460)
..+ ....+.+++.+.+..+.++++|+..|++++..+|+. .+.++||+.++.++++.+..++.|
T Consensus 139 ~~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~~~i~---~a~~~K~i~~l~~~~~~~~g~g~~ 202 (209)
T 2raf_A 139 VNGKEPTTVLVAGNDDSAKQRFTRALADSPLEVKDAGKLK---RARELEAMGFMQMTLAASEQIGWT 202 (209)
T ss_dssp ETTTEECEEEEEESCHHHHHHHHHHTTTSSCEEEEEESGG---GHHHHHHHHHHHHHHHHTTSSCTT
T ss_pred cCCCCCceeEEcCCCHHHHHHHHHHHHHcCCceEeCCCHh---HHHHhcchHHHHHHHHHHcCCCch
Confidence 333 233455667777899999999999999999888864 455567877777788777766654
No 60
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.73 E-value=8e-17 Score=155.64 Aligned_cols=250 Identities=14% Similarity=0.195 Sum_probs=157.4
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
|||+|||+|+||.++|..|+++|. ++|++|+|++++++.+.+. | +..++++.+++ ++|+||+|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~~~~g--------------~~~~~~~~~~~-~~D~vi~~ 64 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGG-YRIYIANRGAEKRERLEKELG--------------VETSATLPELH-SDDVLILA 64 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS-CEEEEECSSHHHHHHHHHHTC--------------CEEESSCCCCC-TTSEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCCC-CeEEEECCCHHHHHHHHHhcC--------------CEEeCCHHHHh-cCCEEEEE
Confidence 689999999999999999998873 6899999999998888764 3 24455677777 99999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccC--
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK-- 284 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~~-- 284 (460)
||...++++++++.+ + +++||++++|+.++ .+.+.++.. ..+ +...|+.+.....|. ..++.+.
T Consensus 65 v~~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~-------~l~~~~~~~-~~~-v~~~~~~~~~~~~g~--~~i~~~~~~ 130 (263)
T 1yqg_A 65 VKPQDMEAACKNIRT--N-GALVLSVAAGLSVG-------TLSRYLGGT-RRI-VRVMPNTPGKIGLGV--SGMYAEAEV 130 (263)
T ss_dssp SCHHHHHHHHTTCCC--T-TCEEEECCTTCCHH-------HHHHHTTSC-CCE-EEEECCGGGGGTCEE--EEEECCTTS
T ss_pred eCchhHHHHHHHhcc--C-CCEEEEecCCCCHH-------HHHHHcCCC-CcE-EEEcCCHHHHHcCce--EEEEcCCCC
Confidence 998889999888766 5 88999999998863 344444431 112 222466555443442 2233444
Q ss_pred CHHHHHHHHHHHhcCCceEEEc-CChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012596 285 DRKLANAVQQLLASKHLRISTS-SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (460)
Q Consensus 285 d~~~~~~l~~lL~~~g~~v~~~-~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~~~ 363 (460)
+.+..+.++++|+..|..++.. +|. +..+.++. |.. +.....+..++.|+ +++.|+++++
T Consensus 131 ~~~~~~~~~~l~~~~g~~~~~~~~~~--------~~~~~al~-g~~-------~~~~~~~~~~l~e~---~~~~G~~~~~ 191 (263)
T 1yqg_A 131 SETDRRIADRIMKSVGLTVWLDDEEK--------MHGITGIS-GSG-------PAYVFYLLDALQNA---AIRQGFDMAE 191 (263)
T ss_dssp CHHHHHHHHHHHHTTEEEEECSSTTH--------HHHHHHHT-TSH-------HHHHHHHHHHHHHH---HHHTTCCHHH
T ss_pred CHHHHHHHHHHHHhCCCEEEeCChhh--------ccHHHHHH-ccH-------HHHHHHHHHHHHHH---HHHcCCCHHH
Confidence 7888999999999999888555 441 12222221 111 12233444555555 8889999877
Q ss_pred cccccCCCceeeecccCCCccchHHHHhh-CCCChHHHHhhcccceehhhhHHHHHHHHHHcCCCChHHHHHHHHHhcC
Q 012596 364 ITGLSGTGDIMLTCFVNLSRNRTVGVRLG-SGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNE 441 (460)
Q Consensus 364 ~~~~~~~gd~~~t~~s~~srn~~~g~~l~-~g~~~e~~~~~~~~~~eg~kd~g~vv~lA~~~gv~~P~~~~v~~ll~~~ 441 (460)
+.++..- .. .. ....+. .|...+.+.+.. ...+ ..+...++..++.|++.|+.+.+++.+...
T Consensus 192 ~~~~~~~--~~---~~-------~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~l~~~~~~~~~~~a~~~~~~~~ 255 (263)
T 1yqg_A 192 ARALSLA--TF---KG-------AVALAEQTGEDFEKLQKNV--TSKG-GTTHEAVEAFRRHRVAEAISEGVCACVRRS 255 (263)
T ss_dssp HHHHHHH--HH---HH-------HHHHHHHHCCCHHHHHHHT--CCTT-SHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH--HH---HH-------HHHHHHhcCCCHHHHHHhc--CCCC-hhHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 6553200 00 00 000111 121111111110 1111 233455566688999999999999988643
No 61
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.72 E-value=4.1e-16 Score=149.79 Aligned_cols=156 Identities=16% Similarity=0.198 Sum_probs=116.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC----eEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL----KVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~----~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
+|||+|||+|+||.+++..|.++| + +|++|+|++++++.+.+. | +..++++.++++++|
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g--~~~~~~V~~~~r~~~~~~~~~~~~g--------------~~~~~~~~e~~~~aD 65 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKN--IVSSNQIICSDLNTANLKNASEKYG--------------LTTTTDNNEVAKNAD 65 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--SSCGGGEEEECSCHHHHHHHHHHHC--------------CEECSCHHHHHHHCS
T ss_pred CCeEEEECccHHHHHHHHHHHhCC--CCCCCeEEEEeCCHHHHHHHHHHhC--------------CEEeCChHHHHHhCC
Confidence 479999999999999999999999 7 999999999999888753 3 345678888889999
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEE
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i 281 (460)
+||+|||.+.+.++++++.+.++++++||++++|+..+ .+++.++.. ...+...|..+.....|. +.+..
T Consensus 66 vVilav~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~-------~l~~~~~~~--~~~v~~~p~~p~~~~~g~-~~~~~ 135 (247)
T 3gt0_A 66 ILILSIKPDLYASIINEIKEIIKNDAIIVTIAAGKSIE-------STENAFNKK--VKVVRVMPNTPALVGEGM-SALCP 135 (247)
T ss_dssp EEEECSCTTTHHHHC---CCSSCTTCEEEECSCCSCHH-------HHHHHHCSC--CEEEEEECCGGGGGTCEE-EEEEE
T ss_pred EEEEEeCHHHHHHHHHHHHhhcCCCCEEEEecCCCCHH-------HHHHHhCCC--CcEEEEeCChHHHHcCce-EEEEe
Confidence 99999999999999999999999999999999998864 344444431 122344566555443332 22222
Q ss_pred c-cCCHHHHHHHHHHHhcCCceEEEcCC
Q 012596 282 A-SKDRKLANAVQQLLASKHLRISTSSD 308 (460)
Q Consensus 282 ~-~~d~~~~~~l~~lL~~~g~~v~~~~D 308 (460)
+ +.+.+.++.++++|+..|..+...++
T Consensus 136 ~~~~~~~~~~~~~~l~~~~G~~~~~~e~ 163 (247)
T 3gt0_A 136 NEMVTEKDLEDVLNIFNSFGQTEIVSEK 163 (247)
T ss_dssp CTTCCHHHHHHHHHHHGGGEEEEECCGG
T ss_pred CCCCCHHHHHHHHHHHHhCCCEEEeCHH
Confidence 2 35788999999999999986555444
No 62
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.72 E-value=1.1e-16 Score=151.37 Aligned_cols=168 Identities=14% Similarity=0.239 Sum_probs=125.8
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEE-EeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYM-LMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v-~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
+|+||||+|||+|+||.++|..|+++| ++|++ |+|++++++++.+. |. ..+.+..++++++|
T Consensus 20 ~m~mmkI~IIG~G~mG~~la~~l~~~g--~~V~~v~~r~~~~~~~l~~~~g~--------------~~~~~~~~~~~~aD 83 (220)
T 4huj_A 20 FQSMTTYAIIGAGAIGSALAERFTAAQ--IPAIIANSRGPASLSSVTDRFGA--------------SVKAVELKDALQAD 83 (220)
T ss_dssp GGGSCCEEEEECHHHHHHHHHHHHHTT--CCEEEECTTCGGGGHHHHHHHTT--------------TEEECCHHHHTTSS
T ss_pred hhcCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCCHHHHHHHHHHhCC--------------CcccChHHHHhcCC
Confidence 345789999999999999999999999 89998 99999988887654 32 12223345578999
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc-----cc--hhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhc-
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE-----LN--TLRMMSQIIPQALRNPRQPFIALSGPSFALELMN- 273 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~-----~~--~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~- 273 (460)
+||+|||.+.+.+++.++.+ + ++++||++++|+. ++ +.....+.+++.++.. ..+...|.....+..
T Consensus 84 vVilavp~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~---~vv~~~~~~~~~v~~~ 158 (220)
T 4huj_A 84 VVILAVPYDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGA---KVVKAFNTLPAAVLAA 158 (220)
T ss_dssp EEEEESCGGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTC---EEEEESCSSCHHHHTS
T ss_pred EEEEeCChHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCC---CEEECCCCCCHHHhhh
Confidence 99999999999999999877 5 5889999999985 11 1223556777776532 223444544443332
Q ss_pred -----cCCeEEEEccCCHHHHHHHHHHHhcCCceEEEcCChHHH
Q 012596 274 -----KLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGV 312 (460)
Q Consensus 274 -----g~~~~i~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~ 312 (460)
+.+..+++++.+.+..+.++++|+..|++++..+++...
T Consensus 159 g~~~~~~~~~v~~~g~~~~~~~~v~~l~~~~G~~~~~~G~l~~a 202 (220)
T 4huj_A 159 DPDKGTGSRVLFLSGNHSDANRQVAELISSLGFAPVDLGTLAAS 202 (220)
T ss_dssp CSBCSSCEEEEEEEESCHHHHHHHHHHHHHTTCEEEECCSHHHH
T ss_pred CcccCCCCeeEEEeCCCHHHHHHHHHHHHHhCCCeEeeCChhhc
Confidence 123456677888999999999999999999999987544
No 63
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.72 E-value=3.5e-16 Score=153.38 Aligned_cols=154 Identities=19% Similarity=0.245 Sum_probs=119.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~---~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
++|||+|||+|+||.+++..|.++| + +|++|+|++++++.+.+.. ++..+++..++++++|+
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g--~~~~~V~v~dr~~~~~~~l~~~~-------------gi~~~~~~~~~~~~aDv 66 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANG--YDPNRICVTNRSLDKLDFFKEKC-------------GVHTTQDNRQGALNADV 66 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTT--CCGGGEEEECSSSHHHHHHHHTT-------------CCEEESCHHHHHSSCSE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCC--CCCCeEEEEeCCHHHHHHHHHHc-------------CCEEeCChHHHHhcCCe
Confidence 4589999999999999999999999 7 8999999999998887741 24566788888999999
Q ss_pred EEEccchhcHHHHHHHhhhc-CCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEE
Q 012596 203 CLHAMPVQFSSSFLEGISDY-VDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~-l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i 281 (460)
||+|||.+.+.++++++.++ ++++++||++++|+..+ .+.+.++.. .. .+...|+.+..+..|. ..+.
T Consensus 67 Vilav~p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~-------~l~~~l~~~-~~-vvr~mPn~p~~v~~g~--~~l~ 135 (280)
T 3tri_A 67 VVLAVKPHQIKMVCEELKDILSETKILVISLAVGVTTP-------LIEKWLGKA-SR-IVRAMPNTPSSVRAGA--TGLF 135 (280)
T ss_dssp EEECSCGGGHHHHHHHHHHHHHTTTCEEEECCTTCCHH-------HHHHHHTCC-SS-EEEEECCGGGGGTCEE--EEEE
T ss_pred EEEEeCHHHHHHHHHHHHhhccCCCeEEEEecCCCCHH-------HHHHHcCCC-Ce-EEEEecCChHHhcCcc--EEEE
Confidence 99999999999999999988 88888999999999764 344445431 12 3455677666554432 2223
Q ss_pred cc--CCHHHHHHHHHHHhcCCceEEE
Q 012596 282 AS--KDRKLANAVQQLLASKHLRIST 305 (460)
Q Consensus 282 ~~--~d~~~~~~l~~lL~~~g~~v~~ 305 (460)
.+ .+.+..+.++++|+..|..++.
T Consensus 136 ~~~~~~~~~~~~v~~l~~~iG~~~~v 161 (280)
T 3tri_A 136 ANETVDKDQKNLAESIMRAVGLVIWV 161 (280)
T ss_dssp CCTTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred eCCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 22 3578899999999999975554
No 64
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.69 E-value=1e-15 Score=148.35 Aligned_cols=195 Identities=13% Similarity=0.062 Sum_probs=133.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCe-EEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLK-VYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~-V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+|||+|||+|.||..++..|++.| ++ |.+|+|++++++.+.+.. ++..+++++++++++|+||+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g--~~~v~~~~~~~~~~~~~~~~~-------------g~~~~~~~~~~~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKG--FRIVQVYSRTEESARELAQKV-------------EAEYTTDLAEVNPYAKLYIV 74 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSHHHHHHHHHHT-------------TCEEESCGGGSCSCCSEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHc-------------CCceeCCHHHHhcCCCEEEE
Confidence 479999999999999999999998 88 899999999888887651 13456688888889999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHH-HhccCCeEEEEccC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE-LMNKLPTAMVVASK 284 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e-~~~g~~~~i~i~~~ 284 (460)
|+|...+.++++++.+.+++++++|++++|+..+. +.+.++.. .......|..... ...+.. .+++.+.
T Consensus 75 av~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~-------l~~~~~~~--~~~~~~~~~~g~~~~~~~~~-~~~v~~~ 144 (266)
T 3d1l_A 75 SLKDSAFAELLQGIVEGKREEALMVHTAGSIPMNV-------WEGHVPHY--GVFYPMQTFSKQREVDFKEI-PFFIEAS 144 (266)
T ss_dssp CCCHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGG-------STTTCSSE--EEEEECCCC---CCCCCTTC-CEEEEES
T ss_pred ecCHHHHHHHHHHHHhhcCCCcEEEECCCCCchHH-------HHHHHHhc--cCcCCceecCCCchhhcCCC-eEEEecC
Confidence 99999889999999888888999999999887642 22222210 1111122211100 011222 2345566
Q ss_pred CHHHHHHHHHHHhcCCceEEEcCChH---HHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 012596 285 DRKLANAVQQLLASKHLRISTSSDVT---GVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKP 361 (460)
Q Consensus 285 d~~~~~~l~~lL~~~g~~v~~~~Di~---g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~~ 361 (460)
+.+..+.++++|+..|.+++..++.. ...|.++..|.. .....+.|. ++++.|+++
T Consensus 145 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-------------------~~~~~~~ea--l~~~~Gl~~ 203 (266)
T 3d1l_A 145 STEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFT-------------------NHMYALAAE--LLKKYNLPF 203 (266)
T ss_dssp SHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHH--HHHHTTCCG
T ss_pred CHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHH--HHHHcCCCH
Confidence 88899999999999998888777542 123333322221 112334453 668999998
Q ss_pred cccccc
Q 012596 362 ATITGL 367 (460)
Q Consensus 362 ~~~~~~ 367 (460)
+.+.++
T Consensus 204 ~~~~~l 209 (266)
T 3d1l_A 204 DVMLPL 209 (266)
T ss_dssp GGGHHH
T ss_pred HHHHHH
Confidence 776543
No 65
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.67 E-value=6.5e-16 Score=150.89 Aligned_cols=173 Identities=13% Similarity=0.131 Sum_probs=123.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~--~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiV 203 (460)
||||+|||+|.||.++|..|+++| + +|++|+|++++++.+.+.|.. ...+++++++++ ++|+|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g--~~~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~aDvV 66 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSG--FKGKIYGYDINPESISKAVDLGII------------DEGTTSIAKVEDFSPDFV 66 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTT--CCSEEEEECSCHHHHHHHHHTTSC------------SEEESCGGGGGGTCCSEE
T ss_pred CcEEEEEecCHHHHHHHHHHHhcC--CCcEEEEEeCCHHHHHHHHHCCCc------------ccccCCHHHHhcCCCCEE
Confidence 479999999999999999999998 6 899999999888887765531 123457777888 99999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEE-----CcccHH-HHhccCCe
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALS-----GPSFAL-ELMNKLPT 277 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~-----gP~~a~-e~~~g~~~ 277 (460)
|+|||.+.+.++++++.+.++++++|++++++. ....+.+.+.+.+. ..+..... ||.++. ++..+.++
T Consensus 67 ilavp~~~~~~v~~~l~~~l~~~~iv~~~~~~~-~~~~~~l~~~l~~~----~v~~~p~~~~~~~gp~~a~~~l~~g~~~ 141 (281)
T 2g5c_A 67 MLSSPVRTFREIAKKLSYILSEDATVTDQGSVK-GKLVYDLENILGKR----FVGGHPIAGTEKSGVEYSLDNLYEGKKV 141 (281)
T ss_dssp EECSCHHHHHHHHHHHHHHSCTTCEEEECCSCC-THHHHHHHHHHGGG----EECEEEECCCSCCSGGGCCSSTTTTCEE
T ss_pred EEcCCHHHHHHHHHHHHhhCCCCcEEEECCCCc-HHHHHHHHHhcccc----ceeeccccCCccCChhhhhhHHhCCCCE
Confidence 999999999999999998898899888877533 32223334444321 12222222 444432 22234333
Q ss_pred EEEEc---cCCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHH
Q 012596 278 AMVVA---SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKN 320 (460)
Q Consensus 278 ~i~i~---~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkN 320 (460)
.+. +.+.+..+.++++|+..|.+++..++..+..|.++..|
T Consensus 142 --~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~ 185 (281)
T 2g5c_A 142 --ILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSH 185 (281)
T ss_dssp --EECCCSSSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTH
T ss_pred --EEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHH
Confidence 344 56788899999999999999888887666666655444
No 66
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.66 E-value=1.7e-15 Score=146.24 Aligned_cols=152 Identities=14% Similarity=0.159 Sum_probs=110.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCC--CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKS--QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~--~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
++|||+|||+|+||++||..|+++|. .++|++|+|++++ .| +..++++.++++++|+|
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g--------------~~~~~~~~~~~~~~D~v 62 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TT--------------LNYMSSNEELARHCDII 62 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SS--------------SEECSCHHHHHHHCSEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------Cc--------------eEEeCCHHHHHhcCCEE
Confidence 45899999999999999999999872 1489999998753 12 34566788888899999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~ 283 (460)
|+|||.+.++++++++.+.+ ++++||+.++|+.++ .+.+.++.. .-.+...|.++.....| .+.+..+.
T Consensus 63 i~~v~~~~~~~v~~~l~~~l-~~~~vv~~~~gi~~~-------~l~~~~~~~--~~~v~~~p~~p~~~~~g-~~~~~~~~ 131 (262)
T 2rcy_A 63 VCAVKPDIAGSVLNNIKPYL-SSKLLISICGGLNIG-------KLEEMVGSE--NKIVWVMPNTPCLVGEG-SFIYCSNK 131 (262)
T ss_dssp EECSCTTTHHHHHHHSGGGC-TTCEEEECCSSCCHH-------HHHHHHCTT--SEEEEEECCGGGGGTCE-EEEEEECT
T ss_pred EEEeCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHH-------HHHHHhCCC--CcEEEECCChHHHHcCC-eEEEEeCC
Confidence 99999999999999999888 678899999999874 233444431 01234557766554444 33222221
Q ss_pred -CCHHHHHHHHHHHhcCCceEEEcCC
Q 012596 284 -KDRKLANAVQQLLASKHLRISTSSD 308 (460)
Q Consensus 284 -~d~~~~~~l~~lL~~~g~~v~~~~D 308 (460)
.+.+.++.++++|+..|..+...++
T Consensus 132 ~~~~~~~~~~~~ll~~~G~~~~~~~~ 157 (262)
T 2rcy_A 132 NVNSTDKKYVNDIFNSCGIIHEIKEK 157 (262)
T ss_dssp TCCHHHHHHHHHHHHTSEEEEECCGG
T ss_pred CCCHHHHHHHHHHHHhCCCEEEeCHH
Confidence 2688899999999999874444444
No 67
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.64 E-value=2.9e-15 Score=149.42 Aligned_cols=201 Identities=15% Similarity=0.147 Sum_probs=135.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-----------cCCCccCCCCCCCCceEEeCCHH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-----------HCNCRYFPEQKLPENVIATTDAK 194 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-----------g~~~~~~~~~~l~~~i~a~~~~~ 194 (460)
.++||+|||+|.||+.||..|+++| ++|++||++++.++++.+. |.....+.......++.++++++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ 82 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHH
Confidence 4589999999999999999999999 9999999999987766432 21000000001123477888999
Q ss_pred hhcCCCcEEEEccchh--cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC--CCCEEEEECcccHHH
Q 012596 195 TALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALE 270 (460)
Q Consensus 195 ea~~~aDiVilaVp~~--~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~--~~~~~v~~gP~~a~e 270 (460)
+++++||+||+|||.. ....++.++.+.++++++|++.+.|+.+. .+.+.++.+ ......+. |...
T Consensus 83 eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~-------~la~~~~~~~r~ig~Hp~~-P~~~-- 152 (319)
T 2dpo_A 83 EAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS-------KLFTGLAHVKQCIVAHPVN-PPYY-- 152 (319)
T ss_dssp HHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH-------HHHTTCTTGGGEEEEEECS-STTT--
T ss_pred HHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHH-------HHHHhcCCCCCeEEeecCC-chhh--
Confidence 9999999999999974 35678889999999999999888777653 233333211 11122222 2211
Q ss_pred HhccCCeEEEEcc--CCHHHHHHHHHHHhcCCceEEEc-CChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHH
Q 012596 271 LMNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTS-SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGC 347 (460)
Q Consensus 271 ~~~g~~~~i~i~~--~d~~~~~~l~~lL~~~g~~v~~~-~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~ 347 (460)
.+...++.+ .+++.+++++++++..|..+... .|..|. +.| .+....+
T Consensus 153 ----~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gf---------------------i~N----rll~a~~ 203 (319)
T 2dpo_A 153 ----IPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGF---------------------VLN----RLQYAII 203 (319)
T ss_dssp ----CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTT---------------------THH----HHHHHHH
T ss_pred ----cceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCc---------------------hHH----HHHHHHH
Confidence 122223433 57899999999999999887765 453321 111 2233478
Q ss_pred HHHHHHHHHcCCCccccccc
Q 012596 348 SEIRWLATKMGAKPATITGL 367 (460)
Q Consensus 348 ~E~~~la~a~Gi~~~~~~~~ 367 (460)
+|++.++++.|++++++.+.
T Consensus 204 ~EA~~l~~~g~~~~~~id~a 223 (319)
T 2dpo_A 204 SEAWRLVEEGIVSPSDLDLV 223 (319)
T ss_dssp HHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHH
Confidence 99999999999998877553
No 68
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.64 E-value=1.2e-15 Score=149.68 Aligned_cols=154 Identities=13% Similarity=0.152 Sum_probs=113.6
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
||||+|||+ |.||..+|..|+++| ++|++|+|++++++.+.+.|.. .+ +..++++++|+||+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~g~~--------------~~-~~~~~~~~aDvVi~ 73 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA--HHLAAIEIAPEGRDRLQGMGIP--------------LT-DGDGWIDEADVVVL 73 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS--SEEEEECCSHHHHHHHHHTTCC--------------CC-CSSGGGGTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHhcCCC--------------cC-CHHHHhcCCCEEEE
Confidence 479999999 999999999999999 8999999999988888764421 11 45567789999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEE-ECcccHHH--------HhccCC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL-SGPSFALE--------LMNKLP 276 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~-~gP~~a~e--------~~~g~~ 276 (460)
|||.+.+.++++++.+.++++++||++++|...+. +.+..+. ..++ ..|.++.+ ...|.+
T Consensus 74 av~~~~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~-------l~~~~~~----~~~v~~~P~~~~~~~~~~~~~~~~g~l 142 (286)
T 3c24_A 74 ALPDNIIEKVAEDIVPRVRPGTIVLILDAAAPYAG-------VMPERAD----ITYFIGHPCHPPLFNDETDPAARTDYH 142 (286)
T ss_dssp CSCHHHHHHHHHHHGGGSCTTCEEEESCSHHHHHT-------CSCCCTT----SEEEEEEECCSCSSCCCCSHHHHTCSS
T ss_pred cCCchHHHHHHHHHHHhCCCCCEEEECCCCchhHH-------HHhhhCC----CeEEecCCCCccccccccchhhccCcc
Confidence 99999999999999999999999999988763321 1121111 2233 55555332 445532
Q ss_pred ------eEE-EEccCCHHHHHHHHHHHhcCCc---eEEEcCC
Q 012596 277 ------TAM-VVASKDRKLANAVQQLLASKHL---RISTSSD 308 (460)
Q Consensus 277 ------~~i-~i~~~d~~~~~~l~~lL~~~g~---~v~~~~D 308 (460)
..+ ...+.+.+..+.++++|+..|. +++..+.
T Consensus 143 ~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~ 184 (286)
T 3c24_A 143 GGIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTT 184 (286)
T ss_dssp SSSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCH
T ss_pred cccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeCh
Confidence 222 2234677889999999999998 6776654
No 69
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.61 E-value=2.4e-15 Score=147.49 Aligned_cols=168 Identities=17% Similarity=0.154 Sum_probs=116.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
++|||+|||+|+||.++|..|+++|.+++|++|+|++++++.+.+.|.. ...+++++++++++|+||+
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~aDvVil 72 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIV------------DEATADFKVFAALADVIIL 72 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSC------------SEEESCTTTTGGGCSEEEE
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCc------------ccccCCHHHhhcCCCEEEE
Confidence 4689999999999999999999985338999999999988888765531 0345577777889999999
Q ss_pred ccchhcHHHHHHHhhhc-CCCCCeEEEeccCCccchhhhHHHHHHHHhCC-C--CCCEEEEE-----CcccHH-HHhccC
Q 012596 206 AMPVQFSSSFLEGISDY-VDPGLPFISLSKGLELNTLRMMSQIIPQALRN-P--RQPFIALS-----GPSFAL-ELMNKL 275 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~-l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~-~--~~~~~v~~-----gP~~a~-e~~~g~ 275 (460)
|||.+...++++++.+. ++++++|++++++... .. +.+.+.++. . ..+..... ||..+. ++..|.
T Consensus 73 avp~~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~-~~----~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~ 147 (290)
T 3b1f_A 73 AVPIKKTIDFIKILADLDLKEDVIITDAGSTKYE-IV----RAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENA 147 (290)
T ss_dssp CSCHHHHHHHHHHHHTSCCCTTCEEECCCSCHHH-HH----HHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTS
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEECCCCchH-HH----HHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCC
Confidence 99999999999999988 8889998887653221 11 333444332 1 01111111 343322 222343
Q ss_pred CeEEEEc-cCCHHHHHHHHHHHhcCCceEEEcCChH
Q 012596 276 PTAMVVA-SKDRKLANAVQQLLASKHLRISTSSDVT 310 (460)
Q Consensus 276 ~~~i~i~-~~d~~~~~~l~~lL~~~g~~v~~~~Di~ 310 (460)
...+... +.+.+..+.++++|+..|.+++..++..
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~~~ 183 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDAAE 183 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCHHH
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHH
Confidence 3333332 3567888999999999999987766533
No 70
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.60 E-value=3.9e-14 Score=141.08 Aligned_cols=165 Identities=13% Similarity=0.154 Sum_probs=117.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHh-hcCCCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKT-ALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~--~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~e-a~~~aDiV 203 (460)
+|||+|||+|.||.+||..|.++| + +|++|||+++.++.+.+.|.. ...++++++ ++++||+|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G--~~~~V~~~dr~~~~~~~a~~~G~~------------~~~~~~~~~~~~~~aDvV 98 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSG--FKGKIYGYDINPESISKAVDLGII------------DEGTTSIAKVEDFSPDFV 98 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTT--CCSEEEEECSCHHHHHHHHHTTSC------------SEEESCTTGGGGGCCSEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--CCCEEEEEECCHHHHHHHHHCCCc------------chhcCCHHHHhhccCCEE
Confidence 489999999999999999999999 7 999999999988888776531 134567778 88999999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECc-----ccHH-HHhccCCe
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGP-----SFAL-ELMNKLPT 277 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP-----~~a~-e~~~g~~~ 277 (460)
|+|||...+.++++++.+.++++++|++++. +.....+.+.+.+ +....+...+.|+ ..+. ++..|..
T Consensus 99 ilavp~~~~~~vl~~l~~~l~~~~iv~d~~S-vk~~~~~~~~~~l----~~~~v~~hPm~G~e~sG~~~A~~~Lf~g~~- 172 (314)
T 3ggo_A 99 MLSSPVRTFREIAKKLSYILSEDATVTDQGS-VKGKLVYDLENIL----GKRFVGGHPIAGTEKSGVEYSLDNLYEGKK- 172 (314)
T ss_dssp EECSCGGGHHHHHHHHHHHSCTTCEEEECCS-CCTHHHHHHHHHH----GGGEECEEECCCCCCCSGGGCCTTTTTTCE-
T ss_pred EEeCCHHHHHHHHHHHhhccCCCcEEEECCC-CcHHHHHHHHHhc----CCCEEecCcccCCcccchhhhhhhhhcCCE-
Confidence 9999999999999999999999999998764 3222122233333 2111222334443 2222 1223433
Q ss_pred EEEEc---cCCHHHHHHHHHHHhcCCceEEEcCChHHH
Q 012596 278 AMVVA---SKDRKLANAVQQLLASKHLRISTSSDVTGV 312 (460)
Q Consensus 278 ~i~i~---~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~ 312 (460)
+++. +.+.+.++.++++|+..|.+++..+.-...
T Consensus 173 -~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD 209 (314)
T 3ggo_A 173 -VILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHD 209 (314)
T ss_dssp -EEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHH
T ss_pred -EEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHH
Confidence 2343 357889999999999999888776554433
No 71
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.59 E-value=6.5e-14 Score=137.25 Aligned_cols=202 Identities=14% Similarity=0.130 Sum_probs=135.5
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-------------cCCCccCCCCCCCCceEEe
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-------------HCNCRYFPEQKLPENVIAT 190 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-------------g~~~~~~~~~~l~~~i~a~ 190 (460)
||.++||+|||+|.||+.+|..|+++| ++|++||++++.++++.+. +..... ......++..+
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~--~~~~~~~i~~~ 76 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHG--FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGA--AQKALGGIRYS 76 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTH--HHHHHHHCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHH--HHHHHcCeEEe
Confidence 456789999999999999999999999 9999999999887766543 110000 00011235677
Q ss_pred CCHHhhcCCCcEEEEccchh--cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEE-EEECccc
Q 012596 191 TDAKTALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI-ALSGPSF 267 (460)
Q Consensus 191 ~~~~ea~~~aDiVilaVp~~--~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~-v~~gP~~ 267 (460)
+++++++++||+||+|+|.+ ....++.++.+.+++++++++.+.++... . +.+.++.....+. ....|..
T Consensus 77 ~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~---~----la~~~~~~~~~ig~h~~~p~~ 149 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS---D----LVGYTGRGDKFLALHFANHVW 149 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH---H----HHHHHSCGGGEEEEEECSSTT
T ss_pred CCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH---H----HHhhcCCCcceEEEccCCCcc
Confidence 89988889999999999986 67788899999999999999888777543 2 2222222100011 1122321
Q ss_pred HHHHhccCCeEEEEc-cCCHHHHHHHHHHHhcCCceEEEc-CChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHH
Q 012596 268 ALELMNKLPTAMVVA-SKDRKLANAVQQLLASKHLRISTS-SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQ 345 (460)
Q Consensus 268 a~e~~~g~~~~i~i~-~~d~~~~~~l~~lL~~~g~~v~~~-~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~ 345 (460)
.+....++.+ ..+.+.++.++++++..|...... .|..|. ....+...
T Consensus 150 -----~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~-------------------------i~nr~~~~ 199 (283)
T 4e12_A 150 -----VNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGY-------------------------VLNSLLVP 199 (283)
T ss_dssp -----TSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTT-------------------------THHHHHHH
T ss_pred -----cCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCE-------------------------EehHHHHH
Confidence 1222222222 136889999999999999877765 453221 01122335
Q ss_pred HHHHHHHHHHHcCCCcccccc
Q 012596 346 GCSEIRWLATKMGAKPATITG 366 (460)
Q Consensus 346 ~~~E~~~la~a~Gi~~~~~~~ 366 (460)
.++|+..++++.+++++++.+
T Consensus 200 ~~~ea~~l~~~g~~~~~~id~ 220 (283)
T 4e12_A 200 LLDAAAELLVDGIADPETIDK 220 (283)
T ss_dssp HHHHHHHHHHTTSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHH
Confidence 689999999999999887654
No 72
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.58 E-value=2e-13 Score=131.58 Aligned_cols=151 Identities=14% Similarity=0.213 Sum_probs=109.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
.+|||+|||+|.||..++..|.+.| ++|.+|+|++++++.+.+. |. ..+++++++++++|+||
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~D~Vi 65 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTP--HELIISGSSLERSKEIAEQLAL--------------PYAMSHQDLIDQVDLVI 65 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSS--CEEEEECSSHHHHHHHHHHHTC--------------CBCSSHHHHHHTCSEEE
T ss_pred CccEEEEECCCHHHHHHHHHHHhCC--CeEEEECCCHHHHHHHHHHcCC--------------EeeCCHHHHHhcCCEEE
Confidence 4689999999999999999999998 8999999999988888754 42 23457888888999999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccC
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK 284 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~~ 284 (460)
+|+|...+.+++.++ ++++++|++++|+.++. +.+.++.. ..+ +...|+++.....| ...++.+.
T Consensus 66 ~~v~~~~~~~v~~~l----~~~~~vv~~~~~~~~~~-------l~~~~~~~-~~~-v~~~p~~~~~~~~g--~~~i~~~~ 130 (259)
T 2ahr_A 66 LGIKPQLFETVLKPL----HFKQPIISMAAGISLQR-------LATFVGQD-LPL-LRIMPNMNAQILQS--STALTGNA 130 (259)
T ss_dssp ECSCGGGHHHHHTTS----CCCSCEEECCTTCCHHH-------HHHHHCTT-SCE-EEEECCGGGGGTCE--EEEEEECT
T ss_pred EEeCcHhHHHHHHHh----ccCCEEEEeCCCCCHHH-------HHHhcCCC-CCE-EEEcCCchHHHcCc--eEEEEcCC
Confidence 999988888887665 36789999988887642 33333321 122 23456655544444 22233333
Q ss_pred --CHHHHHHHHHHHhcCCceEEEcCC
Q 012596 285 --DRKLANAVQQLLASKHLRISTSSD 308 (460)
Q Consensus 285 --d~~~~~~l~~lL~~~g~~v~~~~D 308 (460)
+.+.++.++++|+..| .+...++
T Consensus 131 ~~~~~~~~~~~~ll~~~G-~~~~~~~ 155 (259)
T 2ahr_A 131 LVSQELQARVRDLTDSFG-STFDISE 155 (259)
T ss_dssp TCCHHHHHHHHHHHHTTE-EEEECCG
T ss_pred CCCHHHHHHHHHHHHhCC-CEEEecH
Confidence 7888999999999998 4554443
No 73
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.57 E-value=7.1e-14 Score=130.46 Aligned_cols=180 Identities=14% Similarity=0.173 Sum_probs=125.7
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 128 ~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
|||+||| +|.||..++..|+++| ++|++|+|++++.+.+.+. +. ++. +..+. .++..++++++|+||+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~---~~~----~~~~~-~~~~~~~~~~~D~Vi~ 70 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG--HEIVVGSRREEKAEAKAAEYRR---IAG----DASIT-GMKNEDAAEACDIAVL 70 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT--CEEEEEESSHHHHHHHHHHHHH---HHS----SCCEE-EEEHHHHHHHCSEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHhcc---ccc----cCCCC-hhhHHHHHhcCCEEEE
Confidence 6899999 9999999999999998 8999999999888777653 21 110 01233 2467777889999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchh-------hhHHHHHHHHhCCCCCCEEEEEC--cccHHHHhc--c
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL-------RMMSQIIPQALRNPRQPFIALSG--PSFALELMN--K 274 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~-------~~l~e~l~~~lg~~~~~~~v~~g--P~~a~e~~~--g 274 (460)
++|...+.++++++.+.++ +++++++++|+.+++. ....+.+.+.++.. .++.+ |..+..... .
T Consensus 71 ~~~~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~ 145 (212)
T 1jay_A 71 TIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESE----KVVSALHTIPAARFANLDE 145 (212)
T ss_dssp CSCHHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCS----CEEECCTTCCHHHHHCTTC
T ss_pred eCChhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCC----eEEEEccchHHHHhhCcCC
Confidence 9999888899988887774 8999999999885310 11234455555431 23344 544443322 2
Q ss_pred CC-eEEEEccCCHHHHHHHHHHHhcC-CceEEEcCChHHHHHHHHHHHHH
Q 012596 275 LP-TAMVVASKDRKLANAVQQLLASK-HLRISTSSDVTGVEIAGALKNVL 322 (460)
Q Consensus 275 ~~-~~i~i~~~d~~~~~~l~~lL~~~-g~~v~~~~Di~g~~~~kalkNv~ 322 (460)
.. ..+++++.+.+..+.++++|+.. |..+...+++....|.|.+.|.+
T Consensus 146 ~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~~~~~~a~~~k~~~~~~ 195 (212)
T 1jay_A 146 KFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPLI 195 (212)
T ss_dssp CCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHHTHHHHH
T ss_pred CCCccEEEECCcHHHHHHHHHHHHHcCCCCceeccchhHHHHhcchHHHH
Confidence 22 22334444588899999999999 99887777766666666555543
No 74
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.57 E-value=1.6e-13 Score=135.54 Aligned_cols=200 Identities=16% Similarity=0.179 Sum_probs=131.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-----------hcCCCcc----CCCCCCCCceEEeC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE-----------KHCNCRY----FPEQKLPENVIATT 191 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~-----------~g~~~~~----~~~~~l~~~i~a~~ 191 (460)
++||+|||+|.||+.||..|+++| ++|++||+++++++...+ .|.-... +.......++.+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G--~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 92 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG--HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATST 92 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEec
Confidence 578999999999999999999999 999999999987765432 2210000 00000012467788
Q ss_pred CHHhhcCCCcEEEEccchhc--HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCE-EEEECcccH
Q 012596 192 DAKTALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPF-IALSGPSFA 268 (460)
Q Consensus 192 ~~~ea~~~aDiVilaVp~~~--~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~-~v~~gP~~a 268 (460)
++++++++||+||+|||... ...++.++.+.++++++|++.++|+.... +.+.++.....+ .....|...
T Consensus 93 ~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~-------l~~~~~~~~~~~g~h~~~P~~~ 165 (302)
T 1f0y_A 93 DAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITS-------IANATTRQDRFAGLHFFNPVPV 165 (302)
T ss_dssp CHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHH-------HHTTSSCGGGEEEEEECSSTTT
T ss_pred CHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHH-------HHHhcCCcccEEEEecCCCccc
Confidence 99888899999999999753 56788889888988999998888877542 223222110001 111223211
Q ss_pred HHHhccCCeEEEEcc--CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHH
Q 012596 269 LELMNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQG 346 (460)
Q Consensus 269 ~e~~~g~~~~i~i~~--~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~ 346 (460)
+. ...++.+ .+.+.++.+.++++..|..+....|..+ . +.+ .++...
T Consensus 166 -----~~-~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g----~-----------------i~n----r~l~~~ 214 (302)
T 1f0y_A 166 -----MK-LVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPG----F-----------------IVN----RLLVPY 214 (302)
T ss_dssp -----CC-EEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTT----T-----------------THH----HHHHHH
T ss_pred -----Cc-eEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCccc----c-----------------cHH----HHHHHH
Confidence 12 2223443 3789999999999999877666555321 0 111 122356
Q ss_pred HHHHHHHHHHcCCCcccccc
Q 012596 347 CSEIRWLATKMGAKPATITG 366 (460)
Q Consensus 347 ~~E~~~la~a~Gi~~~~~~~ 366 (460)
++|+..+++..|++++++..
T Consensus 215 ~~Ea~~l~~~g~~~~~~id~ 234 (302)
T 1f0y_A 215 LMEAIRLYERGDASKEDIDT 234 (302)
T ss_dssp HHHHHHHHHTTSSCHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHH
Confidence 89999999999999876643
No 75
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.55 E-value=7.2e-14 Score=131.50 Aligned_cols=162 Identities=16% Similarity=0.185 Sum_probs=116.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
+|||+|||+|.||.+++..|++.| ++|++|+|++++++.+.+.| +... +..++++++|+||+|
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~g--------------~~~~-~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG--FKVVVGSRNPKRTARLFPSA--------------AQVT-FQEEAVSSPEVIFVA 90 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESSHHHHHHHSBTT--------------SEEE-EHHHHTTSCSEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcC--------------Ccee-cHHHHHhCCCEEEEC
Confidence 579999999999999999999998 89999999998877765433 2333 677788999999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEeccCCccchh---hhHHHHHHHHhCCCCCCEEEEECcccHHHHh----ccCCeEE
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL---RMMSQIIPQALRNPRQPFIALSGPSFALELM----NKLPTAM 279 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~---~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~----~g~~~~i 279 (460)
+|...++++++ +.+.+ +++++|++++|+..++. ....+.+.+.++.. .+.-...+..+.... .+ .+.+
T Consensus 91 v~~~~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~--~vv~~~n~~~~~~~~~~~~~g-~~~~ 165 (215)
T 2vns_A 91 VFREHYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTC--TVVKAFNVISAWTLQAGPRDG-NRQV 165 (215)
T ss_dssp SCGGGSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTS--EEEEECTTBCHHHHHTCSCSS-CCEE
T ss_pred CChHHHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCC--eEEeccccccHhHhcccccCC-ceeE
Confidence 99877777664 65655 78999999999876432 13345666665531 111111222221111 22 2335
Q ss_pred EEccCCHHHHHHHHHHHhcCCceEEEcCChH
Q 012596 280 VVASKDRKLANAVQQLLASKHLRISTSSDVT 310 (460)
Q Consensus 280 ~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~ 310 (460)
.+.+.+.+..+.++++|+..|++++..+++.
T Consensus 166 ~~~g~~~~~~~~v~~ll~~~G~~~~~~g~~~ 196 (215)
T 2vns_A 166 PICGDQPEAKRAVSEMALAMGFMPVDMGSLA 196 (215)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEEEECCSGG
T ss_pred EEecCCHHHHHHHHHHHHHcCCceEeecchh
Confidence 6677789999999999999999999888864
No 76
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.54 E-value=6.6e-14 Score=138.27 Aligned_cols=203 Identities=11% Similarity=0.101 Sum_probs=126.4
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
++||+||| +|.||+++|..|+++| ++|++|+|+++ .+..+++++||+||+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G--~~V~~~~~~~~---------------------------~~~~~~~~~aDvVil 71 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASG--YPISILDREDW---------------------------AVAESILANADVVIV 71 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTT--CCEEEECTTCG---------------------------GGHHHHHTTCSEEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCC--CeEEEEECCcc---------------------------cCHHHHhcCCCEEEE
Confidence 46899999 9999999999999999 89999998763 135567889999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKD 285 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~~d 285 (460)
|||.+.+.++++++.++++++++|++++ |+.... .+.+.+.++....+...+.||.. +...+....+.. +.+
T Consensus 72 avp~~~~~~vl~~l~~~l~~~~iv~~~~-svk~~~----~~~~~~~~~~~~v~~hP~~g~~~--~~~~g~~~~l~~-~~~ 143 (298)
T 2pv7_A 72 SVPINLTLETIERLKPYLTENMLLADLT-SVKREP----LAKMLEVHTGAVLGLHPMFGADI--ASMAKQVVVRCD-GRF 143 (298)
T ss_dssp CSCGGGHHHHHHHHGGGCCTTSEEEECC-SCCHHH----HHHHHHHCSSEEEEEEECSCTTC--SCCTTCEEEEEE-EEC
T ss_pred eCCHHHHHHHHHHHHhhcCCCcEEEECC-CCCcHH----HHHHHHhcCCCEEeeCCCCCCCc--hhhcCCeEEEec-CCC
Confidence 9999999999999999999898888765 343221 12233333321111222344433 122343332222 236
Q ss_pred HHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHH-HHHHHhcc-cCCC--cHHHHHHHHHHHHHHH-HHHHcCCC
Q 012596 286 RKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAI-AAGIVVGM-NLGN--NSMAALVAQGCSEIRW-LATKMGAK 360 (460)
Q Consensus 286 ~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai-~~g~~~~~-kl~~--n~~~al~~~~~~E~~~-la~a~Gi~ 360 (460)
.+..+.++++|+..|.+++..++.....+.++.-+.-+. +..+...+ ..+. .....+...++..... +++-.+.+
T Consensus 144 ~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~~f~~~~~~~~ria~~~ 223 (298)
T 2pv7_A 144 PERYEWLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALSSPIYRLELAMIGRLFAQD 223 (298)
T ss_dssp GGGTHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCHHHHHHHHHHHHHhcCC
Confidence 778899999999999998887765555555544443222 11222111 1222 2333445556665333 33334666
Q ss_pred cccccc
Q 012596 361 PATITG 366 (460)
Q Consensus 361 ~~~~~~ 366 (460)
|+...+
T Consensus 224 p~~~~d 229 (298)
T 2pv7_A 224 AELYAD 229 (298)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 77
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.53 E-value=1.3e-13 Score=135.76 Aligned_cols=185 Identities=19% Similarity=0.274 Sum_probs=126.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.+||+|||+|.||..||..|+ +| ++|++||++++.+++..+. . .+ ....++..++++++ +++||+||.|
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG--~~V~v~d~~~~~~~~~~~~-l-----~~-~~~~~i~~~~~~~~-~~~aDlViea 80 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SK--HEVVLQDVSEKALEAAREQ-I-----PE-ELLSKIEFTTTLEK-VKDCDIVMEA 80 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT--SEEEEECSCHHHHHHHHHH-S-----CG-GGGGGEEEESSCTT-GGGCSEEEEC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cC--CEEEEEECCHHHHHHHHHH-H-----HH-HHhCCeEEeCCHHH-HcCCCEEEEc
Confidence 589999999999999999999 99 9999999999988877765 1 00 01124667778876 7899999999
Q ss_pred cchhc-HH-HHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC--CCCEEEEECcccHHHHhccCCeEEEEc
Q 012596 207 MPVQF-SS-SFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALELMNKLPTAMVVA 282 (460)
Q Consensus 207 Vp~~~-~~-~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~--~~~~~v~~gP~~a~e~~~g~~~~i~i~ 282 (460)
+|... ++ .++.++.+. +++++++.+.++.+.. +.+.+..+ .....++ .|... .+...++.
T Consensus 81 vpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~-------~a~~~~~~~r~~G~Hf~-~Pv~~------~~lveiv~ 144 (293)
T 1zej_A 81 VFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDD-------IAERLDSPSRFLGVHWM-NPPHV------MPLVEIVI 144 (293)
T ss_dssp CCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHH-------HHTTSSCGGGEEEEEEC-SSTTT------CCEEEEEE
T ss_pred CcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHH-------HHHHhhcccceEeEEec-Ccccc------CCEEEEEC
Confidence 99754 44 455666665 7888876555566542 22222111 0112222 24321 22333344
Q ss_pred c--CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 012596 283 S--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (460)
Q Consensus 283 ~--~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~~la~a~Gi~ 360 (460)
+ .+++.++++.++++..|..+...+|. .+..+ +....++|++.++++ |++
T Consensus 145 g~~t~~~~~~~~~~l~~~lGk~~v~v~d~------fi~Nr---------------------ll~~~~~EA~~l~~~-Gv~ 196 (293)
T 1zej_A 145 SRFTDSKTVAFVEGFLRELGKEVVVCKGQ------SLVNR---------------------FNAAVLSEASRMIEE-GVR 196 (293)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEESS------CHHHH---------------------HHHHHHHHHHHHHHH-TCC
T ss_pred CCCCCHHHHHHHHHHHHHcCCeEEEeccc------ccHHH---------------------HHHHHHHHHHHHHHh-CCC
Confidence 4 47899999999999999887776663 11111 123478999999999 989
Q ss_pred cccccc
Q 012596 361 PATITG 366 (460)
Q Consensus 361 ~~~~~~ 366 (460)
++++.+
T Consensus 197 ~e~id~ 202 (293)
T 1zej_A 197 AEDVDR 202 (293)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887754
No 78
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.52 E-value=6e-13 Score=138.33 Aligned_cols=198 Identities=17% Similarity=0.215 Sum_probs=130.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHH--------HHHhhcCCCccCCCCCCCCceEEeCCHHhhc
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ--------SINEKHCNCRYFPEQKLPENVIATTDAKTAL 197 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~--------~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~ 197 (460)
.++||+|||+|.||+.||..|+++| ++|++||+++++.. .+.+.|.-... .-.....++..++|++ ++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~-~~~~~~~~i~~t~dl~-al 128 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAG--IETFLVVRNEQRCKQELEVMYAREKSFKRLNDK-RIEKINANLKITSDFH-KL 128 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHH-HHHHHHTTEEEESCGG-GC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHhcceEEeCCHH-HH
Confidence 4689999999999999999999999 99999999988432 22233310000 0001224577888885 68
Q ss_pred CCCcEEEEccchh--cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC--CCCEEEEECcccHHHHhc
Q 012596 198 LGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALELMN 273 (460)
Q Consensus 198 ~~aDiVilaVp~~--~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~--~~~~~v~~gP~~a~e~~~ 273 (460)
++||+||.|||.. ....++.++.+.++++++|++.+.++.+. .+.+.+..+ .....+ ..|...
T Consensus 129 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~-------~ia~~~~~p~r~iG~Hf-fnPv~~----- 195 (460)
T 3k6j_A 129 SNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN-------EISSVLRDPSNLVGIHF-FNPANV----- 195 (460)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH-------HHHTTSSSGGGEEEEEC-CSSTTT-----
T ss_pred ccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH-------HHHHhccCCcceEEEEe-cchhhh-----
Confidence 9999999999964 34678889999999999998877776653 233332211 011111 224321
Q ss_pred cCCeEEEEcc--CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHH
Q 012596 274 KLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIR 351 (460)
Q Consensus 274 g~~~~i~i~~--~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~~ 351 (460)
. +...++.+ .+++.++.+.++++..|..++...|..|. +.| .+....++|++
T Consensus 196 m-~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~pGf-----i~N--------------------ril~~~~~EA~ 249 (460)
T 3k6j_A 196 I-RLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKSF-----VFN--------------------RLLHVYFDQSQ 249 (460)
T ss_dssp C-CEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCCHH-----HHH--------------------HHHHHHHHHHH
T ss_pred C-CEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEecccHH-----HHH--------------------HHHHHHHHHHH
Confidence 1 22223333 37899999999999999888887775442 111 12223578888
Q ss_pred HHHHHcCCCcccccc
Q 012596 352 WLATKMGAKPATITG 366 (460)
Q Consensus 352 ~la~a~Gi~~~~~~~ 366 (460)
.++++.|++++++..
T Consensus 250 ~l~~~~Ga~~e~ID~ 264 (460)
T 3k6j_A 250 KLMYEYGYLPHQIDK 264 (460)
T ss_dssp HHHHTSCCCHHHHHH
T ss_pred HHHHHcCCCHHHHHH
Confidence 888888888776543
No 79
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.21 E-value=3.3e-15 Score=139.38 Aligned_cols=166 Identities=14% Similarity=0.165 Sum_probs=108.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+.|||+|||+|+||.++|..|.+.| ++|++|+|+++ .+.+...+ +... +..++++++|+||+
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G--~~V~~~~r~~~-~~~~~~~g--------------~~~~-~~~~~~~~aDvVil 79 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG--YSVVFGSRNPQ-VSSLLPRG--------------AEVL-CYSEAASRSDVIVL 79 (201)
Confidence 3579999999999999999999998 89999999876 44333222 2233 56677889999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchh-hhHHHHHHHHhCCCCCCEEEEECcccHHHHhc-----cCCeEE
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL-RMMSQIIPQALRNPRQPFIALSGPSFALELMN-----KLPTAM 279 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~-~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~-----g~~~~i 279 (460)
+||.+.+++++ ++.+. .++++||++++|+..... ..-.+.+.+.++.. ..+..-|........ +..+ .
T Consensus 80 av~~~~~~~v~-~l~~~-~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~---~vvra~~n~~a~~~~~g~l~g~~~-~ 153 (201)
T 2yjz_A 80 AVHREHYDFLA-ELADS-LKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGA---HVVKAFNTISAWALQSGTLDASRQ-V 153 (201)
Confidence 99998888877 55543 468899999999853110 00012333333321 112222222222111 1111 2
Q ss_pred EEccCCHHHHHHHHHHHhcCCceEEEcCChHHHHHH
Q 012596 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIA 315 (460)
Q Consensus 280 ~i~~~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~ 315 (460)
.+.+++.+.++.++++|+..|+++...+++....|.
T Consensus 154 ~~~g~~~~~~~~v~~ll~~~G~~~~~~G~l~~a~~~ 189 (201)
T 2yjz_A 154 FVCGNDSKAKDRVMDIARTLGLTPLDQGSLVAAKEI 189 (201)
Confidence 445567788999999999999998887775443333
No 80
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.45 E-value=3.2e-13 Score=141.83 Aligned_cols=198 Identities=16% Similarity=0.197 Sum_probs=129.6
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhc-------CCCccCCC---CCCCCceEEeCCHHh
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH-------CNCRYFPE---QKLPENVIATTDAKT 195 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g-------~~~~~~~~---~~l~~~i~a~~~~~e 195 (460)
.++||+|||+|.||+.||..|+++| ++|++||++++.++++.+.- .....+.. .....++..+++++
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 80 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHG--HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH- 80 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-
Confidence 4579999999999999999999999 99999999999887765420 00000000 00112467778885
Q ss_pred hcCCCcEEEEccchh--cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC--CCCEEEEECcccHHHH
Q 012596 196 ALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALEL 271 (460)
Q Consensus 196 a~~~aDiVilaVp~~--~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~--~~~~~v~~gP~~a~e~ 271 (460)
++++||+||+|||.. ....++.++.+.+++++++++.+.++.++ .+.+.+..+ .....+ ..|...
T Consensus 81 ~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~-------~ia~~~~~p~~~ig~hf-~~Pa~v--- 149 (483)
T 3mog_A 81 ALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISIT-------AIAAEIKNPERVAGLHF-FNPAPV--- 149 (483)
T ss_dssp GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHTTTSSSGGGEEEEEE-CSSTTT---
T ss_pred HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHH-------HHHHHccCccceEEeee-cChhhh---
Confidence 579999999999976 34678899999999999988877777654 233332211 011112 222211
Q ss_pred hccCCeEEEEcc--CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Q 012596 272 MNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSE 349 (460)
Q Consensus 272 ~~g~~~~i~i~~--~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E 349 (460)
.. ...++.+ .+.+.++.+.++++..|..+....|..| . +.|+ +....++|
T Consensus 150 --~~-Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~G----f-----------------i~Nr----~l~~~~~E 201 (483)
T 3mog_A 150 --MK-LVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTPG----F-----------------IVNR----VARPYYSE 201 (483)
T ss_dssp --CC-EEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTT----T-----------------THHH----HTHHHHHH
T ss_pred --CC-eEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccCc----c-----------------hHHH----HHHHHHHH
Confidence 11 2223333 2788999999999999988777666432 1 1122 12236788
Q ss_pred HHHHHHHcCCCccccc
Q 012596 350 IRWLATKMGAKPATIT 365 (460)
Q Consensus 350 ~~~la~a~Gi~~~~~~ 365 (460)
+..++++.+++++++.
T Consensus 202 a~~l~~~g~~~~~~id 217 (483)
T 3mog_A 202 AWRALEEQVAAPEVID 217 (483)
T ss_dssp HHHHHHTTCSCHHHHH
T ss_pred HHHHHHhCCCCHHHHH
Confidence 8888888888776553
No 81
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.44 E-value=3e-14 Score=142.73 Aligned_cols=159 Identities=14% Similarity=0.199 Sum_probs=118.2
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|+ |.++++||+..... +.....+|.++.+.|.. |.+... +.++ ..++|||||+|.||.
T Consensus 88 ~~gI~v~n~~~-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~~~~~~---~~~l--~g~tvGIIG~G~IG~ 158 (330)
T 4e5n_A 88 ARGVWLTFVPD-LLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRG---WQPRFY---GTGL--DNATVGFLGMGAIGL 158 (330)
T ss_dssp HTTCEEECCSS-TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCS---CCSCCC---CCCS--TTCEEEEECCSHHHH
T ss_pred hcCcEEEeCCC-CCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccc---cCcccc---CCcc--CCCEEEEEeeCHHHH
Confidence 46799999999 99999999998855 66666778888888853 544222 2334 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|.+|...| ++|++|+|++...+...+.| +.. .+++++++.+|+|++++|.+ .+..++ .+
T Consensus 159 ~vA~~l~~~G--~~V~~~d~~~~~~~~~~~~g--------------~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 221 (330)
T 4e5n_A 159 AMADRLQGWG--ATLQYHEAKALDTQTEQRLG--------------LRQ-VACSELFASSDFILLALPLNADTLHLVNAE 221 (330)
T ss_dssp HHHHHTTTSC--CEEEEECSSCCCHHHHHHHT--------------EEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCCCcHhHHHhcC--------------cee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCHH
Confidence 9999999877 99999999863333333333 222 37889899999999999954 455555 45
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
....+++++++|++++|-..++ ..+.+.+.+
T Consensus 222 ~l~~mk~gailIN~arg~~vd~-~aL~~aL~~ 252 (330)
T 4e5n_A 222 LLALVRPGALLVNPCRGSVVDE-AAVLAALER 252 (330)
T ss_dssp HHTTSCTTEEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCCchhCH-HHHHHHHHh
Confidence 6778899999999998866553 234444443
No 82
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=3.1e-13 Score=135.87 Aligned_cols=165 Identities=15% Similarity=0.157 Sum_probs=112.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC----CCcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL----GADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~----~aDi 202 (460)
.+||+|||+|.||++||..|.++| ++|++|||+++.++.+.+.|. ..+++++++++ ++|+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G--~~V~~~dr~~~~~~~a~~~G~--------------~~~~~~~e~~~~a~~~aDl 71 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN--HSVFGYNRSRSGAKSAVDEGF--------------DVSADLEATLQRAAAEDAL 71 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHTTC--------------CEESCHHHHHHHHHHTTCE
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCC--------------eeeCCHHHHHHhcccCCCE
Confidence 579999999999999999999999 999999999998888777653 23457776654 4799
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhC-CCCCCEEEEECccc-----HH-HHhccC
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALR-NPRQPFIALSGPSF-----AL-ELMNKL 275 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg-~~~~~~~v~~gP~~-----a~-e~~~g~ 275 (460)
||+|||...+.++++++.++ +++++|++++. +-.. +.+.+.+.+. ..+++...+.|+.. +. ++..|.
T Consensus 72 VilavP~~~~~~vl~~l~~~-~~~~iv~Dv~S-vk~~----i~~~~~~~~~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~ 145 (341)
T 3ktd_A 72 IVLAVPMTAIDSLLDAVHTH-APNNGFTDVVS-VKTA----VYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRA 145 (341)
T ss_dssp EEECSCHHHHHHHHHHHHHH-CTTCCEEECCS-CSHH----HHHHHHHTTCGGGEECEEECCSCC-CCGGGCCSSTTTTC
T ss_pred EEEeCCHHHHHHHHHHHHcc-CCCCEEEEcCC-CChH----HHHHHHHhCCCCcEecCCccccccccchhhhhhHHhcCC
Confidence 99999998899999999886 78888888753 3322 1223333221 11222334444431 11 123343
Q ss_pred CeEEEEcc---CCHH--------HHHHHHHHHhcCCceEEEcCChHHHHHH
Q 012596 276 PTAMVVAS---KDRK--------LANAVQQLLASKHLRISTSSDVTGVEIA 315 (460)
Q Consensus 276 ~~~i~i~~---~d~~--------~~~~l~~lL~~~g~~v~~~~Di~g~~~~ 315 (460)
+. ++.. .+.+ .++.++++|+..|.+++..+.-.+....
T Consensus 146 ~~--iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~ 194 (341)
T 3ktd_A 146 VW--VVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAA 194 (341)
T ss_dssp EE--EECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHH
T ss_pred eE--EEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHH
Confidence 33 3432 2445 7899999999999888776554444433
No 83
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.43 E-value=4e-14 Score=142.73 Aligned_cols=159 Identities=11% Similarity=0.118 Sum_probs=117.4
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|+ |...++||+..... +.....++.++.+.|+. ......+.++ ..++|||||+|.||.
T Consensus 107 ~~gI~V~n~~g-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~------~~~~~~~~~l--~gktvGIIG~G~IG~ 177 (351)
T 3jtm_A 107 AAGLTVAEVTG-SNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNV------AGIAYRAYDL--EGKTIGTVGAGRIGK 177 (351)
T ss_dssp HTTCEEEECTT-TTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCH------HHHHTTCCCS--TTCEEEEECCSHHHH
T ss_pred hcCeeEEECCC-cCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCcc------ccccCCcccc--cCCEEeEEEeCHHHH
Confidence 46799999999 99999999998854 55556677778887743 1111112334 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|++|...| ++|++|+|++...+...+.| +...++++++++.||+|++++|.+ .+..++ .+
T Consensus 178 ~vA~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~ 241 (351)
T 3jtm_A 178 LLLQRLKPFG--CNLLYHDRLQMAPELEKETG--------------AKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKE 241 (351)
T ss_dssp HHHHHHGGGC--CEEEEECSSCCCHHHHHHHC--------------CEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHH
T ss_pred HHHHHHHHCC--CEEEEeCCCccCHHHHHhCC--------------CeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHH
Confidence 9999999888 89999999864444444443 234458999999999999999954 555555 45
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
....+++++++|++++|-..++ ..+.+.+.
T Consensus 242 ~l~~mk~gailIN~aRG~~vde-~aL~~aL~ 271 (351)
T 3jtm_A 242 LIGKLKKGVLIVNNARGAIMER-QAVVDAVE 271 (351)
T ss_dssp HHHHSCTTEEEEECSCGGGBCH-HHHHHHHH
T ss_pred HHhcCCCCCEEEECcCchhhCH-HHHHHHHH
Confidence 6677899999999999876654 23444444
No 84
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.42 E-value=5.6e-14 Score=140.84 Aligned_cols=160 Identities=13% Similarity=0.219 Sum_probs=115.5
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|+ +...++||+..... +.....++.++.+.|.. |.+.+. .+.++ ..++|+|||+|.||.
T Consensus 97 ~~gi~v~n~~~-~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~---~~~~~~--~~~~l--~g~~vgIIG~G~iG~ 168 (330)
T 2gcg_A 97 KRGIRVGYTPD-VLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTS---WKPLWL--CGYGL--TQSTVGIIGLGRIGQ 168 (330)
T ss_dssp HTTCEEECCCS-TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCS---CCTTSS--CBCCC--TTCEEEEECCSHHHH
T ss_pred hCCceEEeCCC-CChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcc---cCcccc--cCcCC--CCCEEEEECcCHHHH
Confidence 45789999999 99999999988854 55556677788887743 322111 12234 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|..|+..| ++|++|+|+.+..+...+.| +... +++++++++|+|++++|.+ .++.++ .+
T Consensus 169 ~iA~~l~~~G--~~V~~~d~~~~~~~~~~~~g--------------~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~ 231 (330)
T 2gcg_A 169 AIARRLKPFG--VQRFLYTGRQPRPEEAAEFQ--------------AEFV-STPELAAQSDFIVVACSLTPATEGLCNKD 231 (330)
T ss_dssp HHHHHHGGGT--CCEEEEESSSCCHHHHHTTT--------------CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHH
T ss_pred HHHHHHHHCC--CEEEEECCCCcchhHHHhcC--------------ceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHH
Confidence 9999999888 89999999875444443322 2333 7888889999999999975 455555 45
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
+.+.+++++++|++++|-..++ ..+.+.+.+
T Consensus 232 ~~~~mk~gailIn~srg~~v~~-~aL~~aL~~ 262 (330)
T 2gcg_A 232 FFQKMKETAVFINISRGDVVNQ-DDLYQALAS 262 (330)
T ss_dssp HHHHSCTTCEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHhcCCCCcEEEECCCCcccCH-HHHHHHHHc
Confidence 6677889999999998754432 344445543
No 85
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.42 E-value=9.4e-14 Score=139.40 Aligned_cols=145 Identities=15% Similarity=0.194 Sum_probs=102.5
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|.|+ +..+++||+..... +.....+|.++.+.|++. . .+ ..+.++ ..++|||||+|.||.
T Consensus 114 ~~gI~V~n~pg-~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~---~-~~--~~~~~l--~gktiGIIGlG~IG~ 184 (340)
T 4dgs_A 114 RRNIDVTTTPG-VLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAG---E-QL--PLGHSP--KGKRIGVLGLGQIGR 184 (340)
T ss_dssp HTTCEEECCCS-SSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------------CCCCCC--TTCEEEEECCSHHHH
T ss_pred hCCEEEEECCC-CCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccc---c-Cc--Cccccc--cCCEEEEECCCHHHH
Confidence 35799999998 99999999988744 666677888888888541 0 01 112334 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccch-hcHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~~~~vl-~~ 218 (460)
.+|.+|...| ++|++|+|+++. .. ......++++++++||+|++++|. ..+..++ ++
T Consensus 185 ~vA~~l~~~G--~~V~~~dr~~~~-----~~--------------~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~ 243 (340)
T 4dgs_A 185 ALASRAEAFG--MSVRYWNRSTLS-----GV--------------DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDAS 243 (340)
T ss_dssp HHHHHHHTTT--CEEEEECSSCCT-----TS--------------CCEECSSHHHHHHTCSEEEECC----------CHH
T ss_pred HHHHHHHHCC--CEEEEEcCCccc-----cc--------------CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHH
Confidence 9999999888 899999998642 00 123446899999999999999995 4567776 56
Q ss_pred hhhcCCCCCeEEEeccCCccc
Q 012596 219 ISDYVDPGLPFISLSKGLELN 239 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~ 239 (460)
..+.+++++++|++++|-..+
T Consensus 244 ~l~~mk~gailIN~aRG~vvd 264 (340)
T 4dgs_A 244 LLQALGPEGIVVNVARGNVVD 264 (340)
T ss_dssp HHHHTTTTCEEEECSCC----
T ss_pred HHhcCCCCCEEEECCCCcccC
Confidence 777889999999999986554
No 86
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.42 E-value=1e-13 Score=139.15 Aligned_cols=162 Identities=15% Similarity=0.279 Sum_probs=117.5
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhc-ccceeeeeccccchhccCCCeEEEECcchHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKL-VRWSRTWRSKAKTDILERTNKVVVLGGGSFG 139 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG 139 (460)
+.++.|+|+|. |...++||+..... +.....++.++.+.|.+. .+|.+.. ..+.++ ..++|+|||+|.||
T Consensus 88 ~~gi~v~n~~~-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~l--~g~~vgIIG~G~iG 162 (334)
T 2dbq_A 88 KRGIYVTNTPD-VLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKW--FLGYDV--YGKTIGIIGLGRIG 162 (334)
T ss_dssp HTTCEEECCCS-TTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTT--TCCCCC--TTCEEEEECCSHHH
T ss_pred hCCCEEEeCCC-cCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccccccccc--ccccCC--CCCEEEEEccCHHH
Confidence 45789999999 99999999988744 555566788888888420 1132111 112234 36899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchhc-HHHHH-H
Q 012596 140 TAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-SSSFL-E 217 (460)
Q Consensus 140 ~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~~-~~~vl-~ 217 (460)
..+|..|+..| ++|++|+|+++. +...+.|. .. .+++++++++|+|++++|.+. ++.++ .
T Consensus 163 ~~iA~~l~~~G--~~V~~~d~~~~~-~~~~~~g~--------------~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~ 224 (334)
T 2dbq_A 163 QAIAKRAKGFN--MRILYYSRTRKE-EVERELNA--------------EF-KPLEDLLRESDFVVLAVPLTRETYHLINE 224 (334)
T ss_dssp HHHHHHHHHTT--CEEEEECSSCCH-HHHHHHCC--------------EE-CCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred HHHHHHHHhCC--CEEEEECCCcch-hhHhhcCc--------------cc-CCHHHHHhhCCEEEECCCCChHHHHhhCH
Confidence 99999999988 899999998866 43333331 22 378888899999999999765 66655 4
Q ss_pred HhhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 218 GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 218 ~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
++.+.+++++++|++++|...++ ..+.+.+.+
T Consensus 225 ~~~~~mk~~ailIn~srg~~v~~-~aL~~aL~~ 256 (334)
T 2dbq_A 225 ERLKLMKKTAILINIARGKVVDT-NALVKALKE 256 (334)
T ss_dssp HHHHHSCTTCEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHHhcCCCCcEEEECCCCcccCH-HHHHHHHHh
Confidence 56677889999999999866553 234444543
No 87
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.42 E-value=3.6e-12 Score=140.18 Aligned_cols=198 Identities=14% Similarity=0.179 Sum_probs=130.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-------cCCCccCCC---CCCCCceEEeCCHHh
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-------HCNCRYFPE---QKLPENVIATTDAKT 195 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-------g~~~~~~~~---~~l~~~i~a~~~~~e 195 (460)
.++||+|||+|.||+.||..|+++| ++|++||++++.++...+. ......++. .....++..++|+ +
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~ 387 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSN--YPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-E 387 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTT--CCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-G
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-H
Confidence 3578999999999999999999999 9999999999877654321 000001111 0123457788888 5
Q ss_pred hcCCCcEEEEccchhc--HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC--CCCEEEEECcccHHHH
Q 012596 196 ALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALEL 271 (460)
Q Consensus 196 a~~~aDiVilaVp~~~--~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~--~~~~~v~~gP~~a~e~ 271 (460)
++++||+||+|||... ...++.++.+++++++++++.++++.+.+ +.+.+..+ .....+ ..|...
T Consensus 388 ~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~-------la~~~~~p~~~iG~hf-~~P~~~--- 456 (725)
T 2wtb_A 388 SFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNK-------IGERTKSQDRIVGAHF-FSPAHI--- 456 (725)
T ss_dssp GGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH-------HTTTCSCTTTEEEEEE-CSSTTT---
T ss_pred HHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHH-------HHHHhcCCCCEEEecC-CCCccc---
Confidence 6899999999999764 46788889999999998888777776532 33322211 111122 234321
Q ss_pred hccCCeEEEEcc--CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Q 012596 272 MNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSE 349 (460)
Q Consensus 272 ~~g~~~~i~i~~--~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E 349 (460)
.+...++.+ .+.+.++.+.++++..|..+....|..|. +. | .+....++|
T Consensus 457 ---~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gf-----i~-----------------N---ril~~~~~E 508 (725)
T 2wtb_A 457 ---MPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNCTGF-----AV-----------------N---RMFFPYTQA 508 (725)
T ss_dssp ---CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESSTTT-----TH-----------------H---HHHHHHHHH
T ss_pred ---CceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECCCccH-----HH-----------------H---HHHHHHHHH
Confidence 122223443 37899999999999999887776664321 11 1 122345788
Q ss_pred HHHHHHHcCCCcccccc
Q 012596 350 IRWLATKMGAKPATITG 366 (460)
Q Consensus 350 ~~~la~a~Gi~~~~~~~ 366 (460)
+..+++. |++++++..
T Consensus 509 a~~l~~~-G~~~e~id~ 524 (725)
T 2wtb_A 509 AMFLVEC-GADPYLIDR 524 (725)
T ss_dssp HHHHHHT-TCCHHHHHH
T ss_pred HHHHHHC-CCCHHHHHH
Confidence 8888887 888766543
No 88
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.41 E-value=1.8e-13 Score=138.10 Aligned_cols=162 Identities=10% Similarity=0.118 Sum_probs=118.4
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcc----cceeeeeccccchhccCCCeEEEECcc
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLV----RWSRTWRSKAKTDILERTNKVVVLGGG 136 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~kI~IIGaG 136 (460)
+.++.|+|.|. | ++++||+..... +.....++.++.+.|+... .|.+.+. .+.++ ..++|||||+|
T Consensus 96 ~~gI~V~n~pg-~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~--~~~~l--~g~tvGIIGlG 169 (352)
T 3gg9_A 96 DKGVVVLEGKG-S-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFG--IGRVL--KGQTLGIFGYG 169 (352)
T ss_dssp HHTCEEECCCC-C-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTT--SBCCC--TTCEEEEECCS
T ss_pred hCCeEEEECCC-C-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccc--cCccC--CCCEEEEEeEC
Confidence 45799999999 8 999999998844 5566677888888886532 2332111 12334 36899999999
Q ss_pred hHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHH
Q 012596 137 SFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSF 215 (460)
Q Consensus 137 ~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~v 215 (460)
.||..+|.+|...| ++|++|+|+.. .+...+.| +...+++++++++||+|++++|.+ .++.+
T Consensus 170 ~IG~~vA~~l~~~G--~~V~~~d~~~~-~~~~~~~g--------------~~~~~~l~ell~~aDiV~l~~Plt~~t~~l 232 (352)
T 3gg9_A 170 KIGQLVAGYGRAFG--MNVLVWGRENS-KERARADG--------------FAVAESKDALFEQSDVLSVHLRLNDETRSI 232 (352)
T ss_dssp HHHHHHHHHHHHTT--CEEEEECSHHH-HHHHHHTT--------------CEECSSHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred HHHHHHHHHHHhCC--CEEEEECCCCC-HHHHHhcC--------------ceEeCCHHHHHhhCCEEEEeccCcHHHHHh
Confidence 99999999999888 99999999863 23333333 234458899999999999999954 45555
Q ss_pred H-HHhhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 216 L-EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 216 l-~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
+ .+..+.+++++++|++++|-..++ ..+.+.+.+
T Consensus 233 i~~~~l~~mk~gailIN~aRg~~vd~-~aL~~aL~~ 267 (352)
T 3gg9_A 233 ITVADLTRMKPTALFVNTSRAELVEE-NGMVTALNR 267 (352)
T ss_dssp BCHHHHTTSCTTCEEEECSCGGGBCT-THHHHHHHH
T ss_pred hCHHHHhhCCCCcEEEECCCchhhcH-HHHHHHHHh
Confidence 4 356677899999999998866553 344455544
No 89
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.41 E-value=6.2e-14 Score=140.99 Aligned_cols=158 Identities=17% Similarity=0.198 Sum_probs=116.9
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|.|+ |..+++||+..... +.....+|.++.+.|++ |.+.. ..+.++ ..++|||||+|.||.
T Consensus 115 ~~gI~V~n~pg-~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~---~~~~~--~~g~~l--~gktvGIIGlG~IG~ 186 (345)
T 4g2n_A 115 SLGIKVLHTPD-VLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPG---WGPTQ--LLGMGL--TGRRLGIFGMGRIGR 186 (345)
T ss_dssp HTTCEEECCCS-CCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCC---CCTTT--TCBCCC--TTCEEEEESCSHHHH
T ss_pred hCCEEEEECCc-ccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcc---cCccc--cccccc--CCCEEEEEEeChhHH
Confidence 35799999998 99999999998744 66677788888888853 33211 113345 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccch-hcHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~~~~vl-~~ 218 (460)
.+|++|...| ++|++|||++...+... + +...+++++++++||+|++++|. ..+..++ .+
T Consensus 187 ~vA~~l~~~G--~~V~~~dr~~~~~~~~~--g--------------~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~ 248 (345)
T 4g2n_A 187 AIATRARGFG--LAIHYHNRTRLSHALEE--G--------------AIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHD 248 (345)
T ss_dssp HHHHHHHTTT--CEEEEECSSCCCHHHHT--T--------------CEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCCcchhhhc--C--------------CeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHH
Confidence 9999999877 99999999863222111 2 23445899999999999999995 4455555 45
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
....+++++++|++++|-..++ ..+.+.+.
T Consensus 249 ~l~~mk~gailIN~aRG~~vde-~aL~~aL~ 278 (345)
T 4g2n_A 249 RIAKIPEGAVVINISRGDLIND-DALIEALR 278 (345)
T ss_dssp HHHHSCTTEEEEECSCGGGBCH-HHHHHHHH
T ss_pred HHhhCCCCcEEEECCCCchhCH-HHHHHHHH
Confidence 6677899999999999876654 23444443
No 90
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.41 E-value=9.1e-14 Score=139.36 Aligned_cols=154 Identities=15% Similarity=0.214 Sum_probs=113.8
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|+ |..+++||+..... +.....++.++.+.|+. . .+ ..+.++ ..++|||||+|.||.
T Consensus 108 ~~gI~v~n~pg-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~----~-~~--~~~~~l--~g~~vgIIG~G~iG~ 177 (333)
T 3ba1_A 108 EKGVRVTNTPD-VLTDDVADLAIGLILAVLRRICECDKYVRRGAWKF----G-DF--KLTTKF--SGKRVGIIGLGRIGL 177 (333)
T ss_dssp HHTCEEECCCS-TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGG----C-CC--CCCCCC--TTCCEEEECCSHHHH
T ss_pred hCCcEEEECCC-cchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCc----c-cc--cccccc--CCCEEEEECCCHHHH
Confidence 34689999999 99999999998854 55556677788887742 1 11 112234 357999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|..|...| ++|++|+|+++..+ | +....+++++++++|+|++++|.+ .++.++ ++
T Consensus 178 ~vA~~l~~~G--~~V~~~dr~~~~~~-----g--------------~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~ 236 (333)
T 3ba1_A 178 AVAERAEAFD--CPISYFSRSKKPNT-----N--------------YTYYGSVVELASNSDILVVACPLTPETTHIINRE 236 (333)
T ss_dssp HHHHHHHTTT--CCEEEECSSCCTTC-----C--------------SEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCchhcc-----C--------------ceecCCHHHHHhcCCEEEEecCCChHHHHHhhHH
Confidence 9999999888 89999999864211 1 234568888899999999999975 466666 34
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
+.+.+++++++|++++|...++ ..+.+.+.+
T Consensus 237 ~l~~mk~gailIn~srG~~vd~-~aL~~aL~~ 267 (333)
T 3ba1_A 237 VIDALGPKGVLINIGRGPHVDE-PELVSALVE 267 (333)
T ss_dssp HHHHHCTTCEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHhcCCCCCEEEECCCCchhCH-HHHHHHHHc
Confidence 5567889999999999877654 334444443
No 91
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.40 E-value=1.4e-13 Score=138.03 Aligned_cols=147 Identities=18% Similarity=0.197 Sum_probs=110.1
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|+ |.++++||+..... +.....++.++.+.|. |.. ...+.++ ..++|||||+|.||.
T Consensus 85 ~~gI~v~n~p~-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~----~~~---~~~~~~l--~g~tvgIiG~G~IG~ 154 (334)
T 2pi1_A 85 KKGILVTHIPA-YSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFS----QDS---EILAREL--NRLTLGVIGTGRIGS 154 (334)
T ss_dssp HHTCEEECCTT-SCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC----CCG---GGCBCCG--GGSEEEEECCSHHHH
T ss_pred HCCeEEEECCC-cCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCc----ccc---Cccceec--cCceEEEECcCHHHH
Confidence 45799999999 99999999998854 5555666777777663 210 1123345 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|.+|...| ++|++|+|+++.... +.| +.. .++++++++||+|++++|.+ .+..++ .+
T Consensus 155 ~vA~~l~~~G--~~V~~~d~~~~~~~~--~~g--------------~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 215 (334)
T 2pi1_A 155 RVAMYGLAFG--MKVLCYDVVKREDLK--EKG--------------CVY-TSLDELLKESDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp HHHHHHHHTT--CEEEEECSSCCHHHH--HTT--------------CEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHH
T ss_pred HHHHHHHHCc--CEEEEECCCcchhhH--hcC--------------cee-cCHHHHHhhCCEEEEeCCCChHHHHhhCHH
Confidence 9999999888 999999998764422 222 122 25889999999999999964 455554 45
Q ss_pred hhhcCCCCCeEEEeccCCccch
Q 012596 219 ISDYVDPGLPFISLSKGLELNT 240 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~ 240 (460)
....+++++++|++++|-..++
T Consensus 216 ~l~~mk~gailIN~aRg~~vd~ 237 (334)
T 2pi1_A 216 RISLMKDGVYLINTARGKVVDT 237 (334)
T ss_dssp HHHHSCTTEEEEECSCGGGBCH
T ss_pred HHhhCCCCcEEEECCCCcccCH
Confidence 5677899999999998876653
No 92
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.39 E-value=1.6e-13 Score=136.95 Aligned_cols=160 Identities=11% Similarity=0.179 Sum_probs=114.8
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|.|+ |..+++||+..... +.....++.++.+.|+. |.+.. ..+.++ ..++|||||+|.||.
T Consensus 88 ~~gi~v~n~p~-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~---~~~~~--~~~~~l--~g~~vgIIG~G~IG~ 159 (320)
T 1gdh_A 88 ARGIKVGNAPH-GVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPG---WEPLE--LVGEKL--DNKTLGIYGFGSIGQ 159 (320)
T ss_dssp HTTCEEECCCC-SCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC---CCTTT--TCBCCC--TTCEEEEECCSHHHH
T ss_pred hCCcEEEEcCC-CCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCc---ccccc--ccCcCC--CCCEEEEECcCHHHH
Confidence 45799999999 99999999988744 55555677788887742 22111 112234 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeC-CHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-H
Q 012596 141 AMAAHVANKKSQLKVYMLMR-DPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-E 217 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r-~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~ 217 (460)
.+|.+|...| ++|++|+| +++.. ...+.| +...++++++++++|+|++++|.. .+..++ +
T Consensus 160 ~~A~~l~~~G--~~V~~~d~~~~~~~-~~~~~g--------------~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~ 222 (320)
T 1gdh_A 160 ALAKRAQGFD--MDIDYFDTHRASSS-DEASYQ--------------ATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNK 222 (320)
T ss_dssp HHHHHHHTTT--CEEEEECSSCCCHH-HHHHHT--------------CEECSSHHHHHHHCSEEEECCCCCTTTTTCBSH
T ss_pred HHHHHHHHCC--CEEEEECCCCcChh-hhhhcC--------------cEEcCCHHHHHhhCCEEEEeccCchHHHhhcCH
Confidence 9999999888 89999999 77542 233333 233447888889999999999965 466655 4
Q ss_pred HhhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 218 GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 218 ~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
+..+.+++++++|+++.|-..+. ..+.+.+.+
T Consensus 223 ~~l~~mk~gailIn~arg~~vd~-~aL~~aL~~ 254 (320)
T 1gdh_A 223 ATIKSLPQGAIVVNTARGDLVDN-ELVVAALEA 254 (320)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCcccCH-HHHHHHHHh
Confidence 46677899999999998744332 234444443
No 93
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.37 E-value=1e-11 Score=136.41 Aligned_cols=197 Identities=15% Similarity=0.129 Sum_probs=127.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-----------hcCCCccCCCCCCCCceEEeCCHH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE-----------KHCNCRYFPEQKLPENVIATTDAK 194 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~-----------~g~~~~~~~~~~l~~~i~a~~~~~ 194 (460)
..+||+|||+|.||+.||..|+++| ++|++||++++.++...+ .|.-... .......++..++++
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~-~~~~~~~~i~~~~d~- 388 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKG--TPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPA-KMAEVLNGIRPTLSY- 388 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHH-HHHHHHHHEEEESSS-
T ss_pred cCCEEEEECCChhhHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHH-HHHHHhcCeEEECCH-
Confidence 4679999999999999999999999 999999999987765321 1210000 000011236677788
Q ss_pred hhcCCCcEEEEccchhc--HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC--CCCEEEEECcccHHH
Q 012596 195 TALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALE 270 (460)
Q Consensus 195 ea~~~aDiVilaVp~~~--~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~--~~~~~v~~gP~~a~e 270 (460)
+++++||+||+|||... ...++.++.++++++++|++.++++.+.. +.+.+..+ .... ....|...
T Consensus 389 ~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~-------la~~~~~~~~~ig~-hf~~P~~~-- 458 (715)
T 1wdk_A 389 GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISL-------LAKALKRPENFVGM-HFFNPVHM-- 458 (715)
T ss_dssp TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHH-------HGGGCSCGGGEEEE-ECCSSTTT--
T ss_pred HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHH-------HHHHhcCccceEEE-EccCCccc--
Confidence 66899999999999654 46688889999999999988777776531 33322211 0111 11223321
Q ss_pred HhccCCeEEEEcc--CCHHHHHHHHHHHhcCCceEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHH
Q 012596 271 LMNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCS 348 (460)
Q Consensus 271 ~~~g~~~~i~i~~--~d~~~~~~l~~lL~~~g~~v~~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~ 348 (460)
.+...++.+ .+.+.++.+.++++..|..++...|..|. +. | .+....++
T Consensus 459 ----~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gf-----i~-----------------N---ril~~~~~ 509 (715)
T 1wdk_A 459 ----MPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGF-----LV-----------------N---RVLFPYFG 509 (715)
T ss_dssp ----CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTTT-----TH-----------------H---HHHHHHHH
T ss_pred ----CceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCCCCh-----hh-----------------h---HHHHHHHH
Confidence 122223333 27899999999999999887776664321 11 1 12234578
Q ss_pred HHHHHHHHcCCCcccccc
Q 012596 349 EIRWLATKMGAKPATITG 366 (460)
Q Consensus 349 E~~~la~a~Gi~~~~~~~ 366 (460)
|+..+++. |++++++..
T Consensus 510 Ea~~l~~~-G~~~~~id~ 526 (715)
T 1wdk_A 510 GFAKLVSA-GVDFVRIDK 526 (715)
T ss_dssp HHHHHHHT-TCCHHHHHH
T ss_pred HHHHHHHC-CCCHHHHHH
Confidence 88888886 888766543
No 94
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.37 E-value=1.8e-13 Score=136.47 Aligned_cols=151 Identities=15% Similarity=0.161 Sum_probs=111.0
Q ss_pred ceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHHHH
Q 012596 67 NTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAM 142 (460)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~~ 142 (460)
++.|+|.|+ |...++||+..... +.....++.++.+.|+. . ...++ ..++|||||+|.||..+
T Consensus 89 gI~v~n~~g-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~------~----~~~~l--~g~tvGIIGlG~IG~~v 155 (324)
T 3hg7_A 89 DYQLTNVRG-IFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQS------H----PYQGL--KGRTLLILGTGSIGQHI 155 (324)
T ss_dssp SSEEECCCS-CCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC------C----CCCCS--TTCEEEEECCSHHHHHH
T ss_pred CEEEEECCC-cChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcC------C----CCccc--ccceEEEEEECHHHHHH
Confidence 699999998 99999999998844 55556677777777743 1 12234 36899999999999999
Q ss_pred HHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HHhh
Q 012596 143 AAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGIS 220 (460)
Q Consensus 143 A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~i~ 220 (460)
|.+|...| ++|++|+|+++..+ .. .......++++++++||+|++++|.+ .++.++ .+..
T Consensus 156 A~~l~~~G--~~V~~~dr~~~~~~-----~~-----------~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l 217 (324)
T 3hg7_A 156 AHTGKHFG--MKVLGVSRSGRERA-----GF-----------DQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRF 217 (324)
T ss_dssp HHHHHHTT--CEEEEECSSCCCCT-----TC-----------SEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTT
T ss_pred HHHHHhCC--CEEEEEcCChHHhh-----hh-----------hcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHH
Confidence 99999888 99999999863111 00 01112357889999999999999954 466655 3466
Q ss_pred hcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 221 DYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 221 ~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
..+++++++|++++|-..++ ..+.+.+.
T Consensus 218 ~~mk~gailIN~aRG~~vde-~aL~~aL~ 245 (324)
T 3hg7_A 218 EHCKPGAILFNVGRGNAINE-GDLLTALR 245 (324)
T ss_dssp TCSCTTCEEEECSCGGGBCH-HHHHHHHH
T ss_pred hcCCCCcEEEECCCchhhCH-HHHHHHHH
Confidence 77899999999999876654 23334443
No 95
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.36 E-value=2.1e-13 Score=139.29 Aligned_cols=159 Identities=10% Similarity=0.063 Sum_probs=114.3
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|. +..+++||+..... +.....++.++++.|+. .+....+.++ ..++|||||+|.||.
T Consensus 134 ~~gI~V~n~~g-~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~------~~~~~~~~~l--~gktvGIIGlG~IG~ 204 (393)
T 2nac_A 134 DRNVTVAEVTY-CNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNI------ADCVSHAYDL--EAMHVGTVAAGRIGL 204 (393)
T ss_dssp HTTCEEEECTT-TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCH------HHHHTTCCCC--TTCEEEEECCSHHHH
T ss_pred cCCEEEEeCCC-cccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCc------cccccCCccC--CCCEEEEEeECHHHH
Confidence 35799999998 88899999998855 44445667777777743 1111112234 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|++|...| ++|++|+|++...+...+.|. ....+++++++.+|+|++++|.+ .++.++ ++
T Consensus 205 ~vA~~l~a~G--~~V~~~d~~~~~~~~~~~~G~--------------~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~ 268 (393)
T 2nac_A 205 AVLRRLAPFD--VHLHYTDRHRLPESVEKELNL--------------TWHATREDMYPVCDVVTLNCPLHPETEHMINDE 268 (393)
T ss_dssp HHHHHHGGGT--CEEEEECSSCCCHHHHHHHTC--------------EECSSHHHHGGGCSEEEECSCCCTTTTTCBSHH
T ss_pred HHHHHHHhCC--CEEEEEcCCccchhhHhhcCc--------------eecCCHHHHHhcCCEEEEecCCchHHHHHhhHH
Confidence 9999999888 999999998644333333332 23347889999999999999964 566666 45
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
..+.+++++++|++++|-..++ ..+.+.+.
T Consensus 269 ~l~~mk~gailIN~aRG~~vde-~aL~~aL~ 298 (393)
T 2nac_A 269 TLKLFKRGAYIVNTARGKLCDR-DAVARALE 298 (393)
T ss_dssp HHTTSCTTEEEEECSCGGGBCH-HHHHHHHH
T ss_pred HHhhCCCCCEEEECCCchHhhH-HHHHHHHH
Confidence 6678899999999998855543 23344443
No 96
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.36 E-value=3.2e-11 Score=126.14 Aligned_cols=166 Identities=14% Similarity=0.130 Sum_probs=109.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-----------cCCCccCCCCCCCCceEEeCCHH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-----------HCNCRYFPEQKLPENVIATTDAK 194 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-----------g~~~~~~~~~~l~~~i~a~~~~~ 194 (460)
.++||+|||+|.||+.||..|+++| ++|++||++++.++...+. |.. . +...-.....+++++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~-~--~~~~~~~~~~i~~~~- 109 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQ-N--GQASAKPKLRFSSST- 109 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHH-T--TCCCCCCCEEEESCG-
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCC-C--HHHHHHHHhhhcCCH-
Confidence 4689999999999999999999999 9999999999877655431 100 0 000001123456777
Q ss_pred hhcCCCcEEEEccchhc--HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCC--CCCEEEEECcccHHH
Q 012596 195 TALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALE 270 (460)
Q Consensus 195 ea~~~aDiVilaVp~~~--~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~--~~~~~v~~gP~~a~e 270 (460)
+++++||+||+|||... ...++.++.+.++++++|++.+.++... .+.+.+..+ .....+ ..|...
T Consensus 110 ~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~-------~la~~~~~~~~~ig~hf-~~P~~~-- 179 (463)
T 1zcj_A 110 KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVD-------DIASSTDRPQLVIGTHF-FSPAHV-- 179 (463)
T ss_dssp GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHHTTSSCGGGEEEEEE-CSSTTT--
T ss_pred HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHH-------HHHHHhcCCcceEEeec-CCCccc--
Confidence 45789999999999753 4678888989999999998866555432 223322211 011122 245321
Q ss_pred HhccCCeEEEEc-cCCHHHHHHHHHHHhcCCceEEEcCChH
Q 012596 271 LMNKLPTAMVVA-SKDRKLANAVQQLLASKHLRISTSSDVT 310 (460)
Q Consensus 271 ~~~g~~~~i~i~-~~d~~~~~~l~~lL~~~g~~v~~~~Di~ 310 (460)
.....++.+ ..+.+.++.+.++++..|..+....|..
T Consensus 180 ---~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~ 217 (463)
T 1zcj_A 180 ---MRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCY 217 (463)
T ss_dssp ---CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCST
T ss_pred ---ceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCc
Confidence 121222233 3578999999999999988777766643
No 97
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.36 E-value=2.6e-13 Score=137.64 Aligned_cols=158 Identities=10% Similarity=0.112 Sum_probs=114.6
Q ss_pred ceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHHHH
Q 012596 67 NTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAM 142 (460)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~~ 142 (460)
++.|+|+|+ |.+.++||+..... +.....++.++.+.|+. ......+.++ ..++|||||+|.||..+
T Consensus 109 gI~V~n~pg-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~------~~~~~~~~~l--~g~tvgIIG~G~IG~~v 179 (364)
T 2j6i_A 109 KISVLEVTG-SNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEV------AAIAKDAYDI--EGKTIATIGAGRIGYRV 179 (364)
T ss_dssp CCEEEECTT-SSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCH------HHHHTTCCCS--TTCEEEEECCSHHHHHH
T ss_pred CEEEEECCC-cCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCc------CcccCCcccC--CCCEEEEECcCHHHHHH
Confidence 799999999 99999999998854 55555677777777732 1001112234 36899999999999999
Q ss_pred HHHHHhcCCCCe-EEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HHh
Q 012596 143 AAHVANKKSQLK-VYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGI 219 (460)
Q Consensus 143 A~~La~~G~~~~-V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~i 219 (460)
|.+|...| ++ |++|+|++...+...+.| +....+++++++.+|+|++++|.+ .++.++ ++.
T Consensus 180 A~~l~~~G--~~~V~~~d~~~~~~~~~~~~g--------------~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 243 (364)
T 2j6i_A 180 LERLVPFN--PKELLYYDYQALPKDAEEKVG--------------ARRVENIEELVAQADIVTVNAPLHAGTKGLINKEL 243 (364)
T ss_dssp HHHHGGGC--CSEEEEECSSCCCHHHHHHTT--------------EEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHH
T ss_pred HHHHHhCC--CcEEEEECCCccchhHHHhcC--------------cEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHH
Confidence 99999888 87 999998865444443333 233457889899999999999975 455655 346
Q ss_pred hhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 220 SDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 220 ~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
.+.+++++++|++++|-..++ ..+.+.+.+
T Consensus 244 l~~mk~ga~lIn~arG~~vd~-~aL~~aL~~ 273 (364)
T 2j6i_A 244 LSKFKKGAWLVNTARGAICVA-EDVAAALES 273 (364)
T ss_dssp HTTSCTTEEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HhhCCCCCEEEECCCCchhCH-HHHHHHHHc
Confidence 677899999999998855543 234444443
No 98
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.35 E-value=8.3e-13 Score=128.82 Aligned_cols=151 Identities=11% Similarity=0.121 Sum_probs=91.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V-~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+|||+|||+|+||..++..|+++ ++| .+|+|++++++.+.+... . .+++++++++++|+||+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~---~~v~~v~~~~~~~~~~~~~~~g-------------~-~~~~~~~~~~~~DvVil 64 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR---YEIGYILSRSIDRARNLAEVYG-------------G-KAATLEKHPELNGVVFV 64 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHHTC-------------C-CCCSSCCCCC---CEEE
T ss_pred CceEEEEeCCHHHHHHHHHHHHc---CcEEEEEeCCHHHHHHHHHHcC-------------C-ccCCHHHHHhcCCEEEE
Confidence 47999999999999999999875 578 599999998888765310 1 23456666788999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKD 285 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~~d 285 (460)
|||.+...+++.++. .++++||+++.++..+. +.+......++...+.|+........+.+ +.+.+ +
T Consensus 65 av~~~~~~~v~~~l~---~~~~ivi~~s~~~~~~~-------l~~~~~~~~~p~~~~~g~~~~~~~~~~~~--~~~~~-~ 131 (276)
T 2i76_A 65 IVPDRYIKTVANHLN---LGDAVLVHCSGFLSSEI-------FKKSGRASIHPNFSFSSLEKALEMKDQIV--FGLEG-D 131 (276)
T ss_dssp CSCTTTHHHHHTTTC---CSSCCEEECCSSSCGGG-------GCSSSEEEEEECSCC--CTTGGGCGGGCC--EEECC-C
T ss_pred eCChHHHHHHHHHhc---cCCCEEEECCCCCcHHH-------HHHhhccccchhhhcCCCchhHHHhCCCe--EEEEe-C
Confidence 999999988888775 57889999887655432 11111100011112333222211122322 23443 4
Q ss_pred HHHHHHHHHHHhcCCceEEEcC
Q 012596 286 RKLANAVQQLLASKHLRISTSS 307 (460)
Q Consensus 286 ~~~~~~l~~lL~~~g~~v~~~~ 307 (460)
.+.++.++++|+..|.+++..+
T Consensus 132 ~~~~~~~~~l~~~lG~~~~~v~ 153 (276)
T 2i76_A 132 ERGLPIVKKIAEEISGKYFVIP 153 (276)
T ss_dssp TTTHHHHHHHHHHHCSCEEECC
T ss_pred hHHHHHHHHHHHHhCCCEEEEC
Confidence 5558899999998886665554
No 99
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.35 E-value=7.4e-13 Score=132.78 Aligned_cols=156 Identities=10% Similarity=0.144 Sum_probs=114.3
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.++|+|. |.+.++||+..... +.....++.++++.|+.. .+ .+.++ ..++|||||+|.||.
T Consensus 110 ~~gI~v~n~p~-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~-----~~---~~~~l--~g~tvgIIGlG~IG~ 178 (335)
T 2g76_A 110 RKGILVMNTPN-GNSLSAAELTCGMIMCLARQIPQATASMKDGKWERK-----KF---MGTEL--NGKTLGILGLGRIGR 178 (335)
T ss_dssp HHTCEEECCSS-TTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTG-----GG---CBCCC--TTCEEEEECCSHHHH
T ss_pred hCCeEEEECCC-ccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCcc-----CC---CCcCC--CcCEEEEEeECHHHH
Confidence 34689999998 99999999998744 555566777888877421 11 12234 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|.+|...| ++|++|+|+.... ...+.|. .. .+++++++++|+|++++|.+ .++.++ ++
T Consensus 179 ~vA~~l~~~G--~~V~~~d~~~~~~-~~~~~g~--------------~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 240 (335)
T 2g76_A 179 EVATRMQSFG--MKTIGYDPIISPE-VSASFGV--------------QQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDN 240 (335)
T ss_dssp HHHHHHHTTT--CEEEEECSSSCHH-HHHHTTC--------------EE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCcchh-hhhhcCc--------------ee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHH
Confidence 9999999877 9999999986542 3333331 22 37888899999999999975 466666 45
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
..+.+++++++|+++.|-..++ ..+.+.+.+
T Consensus 241 ~l~~mk~gailIN~arg~vvd~-~aL~~aL~~ 271 (335)
T 2g76_A 241 TFAQCKKGVRVVNCARGGIVDE-GALLRALQS 271 (335)
T ss_dssp HHTTSCTTEEEEECSCTTSBCH-HHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCccccCH-HHHHHHHHh
Confidence 6778899999999998765543 234444443
No 100
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.35 E-value=5.2e-13 Score=134.13 Aligned_cols=155 Identities=18% Similarity=0.211 Sum_probs=110.4
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhh-hhhhhhcccceeeeeccccchhccCCCeEEEECcchHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIV-KVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFG 139 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG 139 (460)
+.++.|+|+|+ |.++++||+..... +.....++.++ ++.| +|.... .+.++ ..++|||||+|.||
T Consensus 91 ~~gI~v~n~p~-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~----~w~~~~---~~~~l--~gktvgIiGlG~IG 160 (343)
T 2yq5_A 91 KYNLLVTNVPV-YSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDF----TWPSNL---ISNEI--YNLTVGLIGVGHIG 160 (343)
T ss_dssp C--CEEECCSC-SCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCC----CCCGGG---CBCCG--GGSEEEEECCSHHH
T ss_pred hCCEEEEECCC-CCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCc----ccccCC---Ccccc--CCCeEEEEecCHHH
Confidence 45899999998 99999999998855 45555666666 6655 353221 23345 36899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-H
Q 012596 140 TAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-E 217 (460)
Q Consensus 140 ~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~ 217 (460)
..+|.+|...| ++|++|+|+++.. . +. .+.. .++++++++||+|++++|.+ .+..++ .
T Consensus 161 ~~vA~~l~~~G--~~V~~~d~~~~~~--~-~~--------------~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~~ 220 (343)
T 2yq5_A 161 SAVAEIFSAMG--AKVIAYDVAYNPE--F-EP--------------FLTY-TDFDTVLKEADIVSLHTPLFPSTENMIGE 220 (343)
T ss_dssp HHHHHHHHHTT--CEEEEECSSCCGG--G-TT--------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCH
T ss_pred HHHHHHHhhCC--CEEEEECCChhhh--h-hc--------------cccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhhH
Confidence 99999999888 9999999986420 0 10 1122 27889999999999999953 455544 3
Q ss_pred HhhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 218 GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 218 ~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
+....+++++++|++++|-..++ +.+.+.+.+
T Consensus 221 ~~l~~mk~gailIN~aRg~~vd~-~aL~~aL~~ 252 (343)
T 2yq5_A 221 KQLKEMKKSAYLINCARGELVDT-GALIKALQD 252 (343)
T ss_dssp HHHHHSCTTCEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCChhhhH-HHHHHHHHc
Confidence 45677899999999999876654 334444443
No 101
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.35 E-value=1.1e-13 Score=139.01 Aligned_cols=159 Identities=18% Similarity=0.272 Sum_probs=113.6
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeec-cccchhccCCCeEEEECcchHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRS-KAKTDILERTNKVVVLGGGSFG 139 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~kI~IIGaG~mG 139 (460)
+.++.|+|+|+ |...++||+..... +.....++.++.+.|++ |...+.. +.-.++ ..++|+|||+|.||
T Consensus 85 ~~gi~v~n~~~-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~~~~~~~~~~~~~l--~g~~vgIIG~G~iG 158 (333)
T 2d0i_A 85 KRGIYVTKVSG-LLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWES---HAKIWTGFKRIESL--YGKKVGILGMGAIG 158 (333)
T ss_dssp HTTCEEECCCH-HHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCC---HHHHHTTSCCCCCS--TTCEEEEECCSHHH
T ss_pred hCCcEEEeCCC-cChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCc---CcccccCCcccCCC--CcCEEEEEccCHHH
Confidence 45689999999 99999999998844 55556677788887742 2110111 000234 36899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHHH-
Q 012596 140 TAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLE- 217 (460)
Q Consensus 140 ~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl~- 217 (460)
..+|..|...| ++|++|+|+++. +...+.| +.. .++++++++||+|++++|.+ .+..++.
T Consensus 159 ~~vA~~l~~~G--~~V~~~d~~~~~-~~~~~~g--------------~~~-~~l~e~l~~aDiVil~vp~~~~t~~~i~~ 220 (333)
T 2d0i_A 159 KAIARRLIPFG--VKLYYWSRHRKV-NVEKELK--------------ARY-MDIDELLEKSDIVILALPLTRDTYHIINE 220 (333)
T ss_dssp HHHHHHHGGGT--CEEEEECSSCCH-HHHHHHT--------------EEE-CCHHHHHHHCSEEEECCCCCTTTTTSBCH
T ss_pred HHHHHHHHHCC--CEEEEECCCcch-hhhhhcC--------------cee-cCHHHHHhhCCEEEEcCCCChHHHHHhCH
Confidence 99999999888 899999998765 3333333 233 37888889999999999976 5666653
Q ss_pred HhhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 218 GISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 218 ~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
++.+.++++ ++|++++|...++ ..+.+.+.
T Consensus 221 ~~~~~mk~g-ilin~srg~~vd~-~aL~~aL~ 250 (333)
T 2d0i_A 221 ERVKKLEGK-YLVNIGRGALVDE-KAVTEAIK 250 (333)
T ss_dssp HHHHHTBTC-EEEECSCGGGBCH-HHHHHHHH
T ss_pred HHHhhCCCC-EEEECCCCcccCH-HHHHHHHH
Confidence 456678889 9999999876653 23334443
No 102
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=99.34 E-value=3.3e-13 Score=135.34 Aligned_cols=155 Identities=15% Similarity=0.155 Sum_probs=112.9
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|+ |.++++||+..... +.....++.++.+.|. |. ...+.++ ..++|||||+|.||.
T Consensus 91 ~~gi~v~n~p~-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~----~~----~~~~~~l--~g~~vgIiG~G~IG~ 159 (333)
T 1j4a_A 91 ELGFQITNVPV-YSPNAIAEHAAIQAARILRQDKAMDEKVARHDLR----WA----PTIGREV--RDQVVGVVGTGHIGQ 159 (333)
T ss_dssp HTTCEEECCCC-SCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCC----CT----TCCBCCG--GGSEEEEECCSHHHH
T ss_pred hCCCEEEeCCC-CCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCc----cC----CcccccC--CCCEEEEEccCHHHH
Confidence 45789999999 99999999998855 5555667777777762 32 1223334 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|.+|...| ++|++|+|+++.. + +.+. ...++++++++.+|+|++++|.+ .++.++ +.
T Consensus 160 ~~A~~l~~~G--~~V~~~d~~~~~~--~-~~~~--------------~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~ 220 (333)
T 1j4a_A 160 VFMQIMEGFG--AKVITYDIFRNPE--L-EKKG--------------YYVDSLDDLYKQADVISLHVPDVPANVHMINDE 220 (333)
T ss_dssp HHHHHHHHTT--CEEEEECSSCCHH--H-HHTT--------------CBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHH
T ss_pred HHHHHHHHCC--CEEEEECCCcchh--H-HhhC--------------eecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHH
Confidence 9999999888 8999999987643 2 2211 11236888889999999999964 355555 34
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
..+.+++++++|+++.|-..++ ..+.+.+.+
T Consensus 221 ~l~~mk~ga~lIn~arg~~vd~-~aL~~aL~~ 251 (333)
T 1j4a_A 221 SIAKMKQDVVIVNVSRGPLVDT-DAVIRGLDS 251 (333)
T ss_dssp HHHHSCTTEEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCCcccCH-HHHHHHHHh
Confidence 5677889999999998765543 344444443
No 103
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.34 E-value=4e-13 Score=133.61 Aligned_cols=144 Identities=10% Similarity=0.090 Sum_probs=108.2
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|.|. |...++||+..... +.....++.++++.|+. + .+.++ ..++|||||+|.||.
T Consensus 89 ~~gi~v~n~~g-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~-------~---~~~~l--~g~~vgIIG~G~IG~ 155 (313)
T 2ekl_A 89 KRNIKVVYAPG-ASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKK-------I---EGLEL--AGKTIGIVGFGRIGT 155 (313)
T ss_dssp HTTCEEECCTT-TTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCC-------C---CCCCC--TTCEEEEESCSHHHH
T ss_pred hCCeEEEeCCC-CCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC-------C---CCCCC--CCCEEEEEeeCHHHH
Confidence 45799999999 99999999998854 55555677777776631 1 12234 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchhc-HHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-SSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~~-~~~vl-~~ 218 (460)
.+|.+|...| ++|++|+|+++... ..+.|. .. .+++++++.+|+|++++|.+. +..++ ++
T Consensus 156 ~~A~~l~~~G--~~V~~~d~~~~~~~-~~~~g~--------------~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~ 217 (313)
T 2ekl_A 156 KVGIIANAMG--MKVLAYDILDIREK-AEKINA--------------KA-VSLEELLKNSDVISLHVTVSKDAKPIIDYP 217 (313)
T ss_dssp HHHHHHHHTT--CEEEEECSSCCHHH-HHHTTC--------------EE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCcchhH-HHhcCc--------------ee-cCHHHHHhhCCEEEEeccCChHHHHhhCHH
Confidence 9999999888 99999999876542 333331 22 378888899999999999644 55555 44
Q ss_pred hhhcCCCCCeEEEeccCCccc
Q 012596 219 ISDYVDPGLPFISLSKGLELN 239 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~ 239 (460)
..+.+++++++|+++.|-..+
T Consensus 218 ~l~~mk~ga~lIn~arg~~vd 238 (313)
T 2ekl_A 218 QFELMKDNVIIVNTSRAVAVN 238 (313)
T ss_dssp HHHHSCTTEEEEESSCGGGBC
T ss_pred HHhcCCCCCEEEECCCCcccC
Confidence 566788999999999875544
No 104
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.33 E-value=3.8e-13 Score=135.73 Aligned_cols=152 Identities=11% Similarity=0.135 Sum_probs=111.0
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhh---hhhcccceeeeeccccchhccCCCeEEEECcch
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVA---WEKLVRWSRTWRSKAKTDILERTNKVVVLGGGS 137 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~ 137 (460)
+.++.|+|.|+ |...++||+..... +.....++.++.+. |++. |... ...+.++ ..++|||||+|.
T Consensus 101 ~~gI~v~n~p~-~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~--~~~~--~~~~~~l--~g~~vgIIG~G~ 173 (348)
T 2w2k_A 101 ERGVAFANSRG-AGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRV--HLEI--GKSAHNP--RGHVLGAVGLGA 173 (348)
T ss_dssp HTTCEEECCTT-TTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHH--HHHH--HTTCCCS--TTCEEEEECCSH
T ss_pred hCCcEEEECCC-CCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccc--cccc--cccCcCC--CCCEEEEEEECH
Confidence 46799999999 99999999988744 55556677788887 7320 0000 0112234 368999999999
Q ss_pred HHHHHHHHHH-hcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHH
Q 012596 138 FGTAMAAHVA-NKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSF 215 (460)
Q Consensus 138 mG~~~A~~La-~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~v 215 (460)
||..+|..|. ..| ++|++|||+++..+...+.| +...+++++++++||+|++++|.+ .+..+
T Consensus 174 IG~~vA~~l~~~~G--~~V~~~d~~~~~~~~~~~~g--------------~~~~~~l~ell~~aDvVil~vp~~~~t~~l 237 (348)
T 2w2k_A 174 IQKEIARKAVHGLG--MKLVYYDVAPADAETEKALG--------------AERVDSLEELARRSDCVSVSVPYMKLTHHL 237 (348)
T ss_dssp HHHHHHHHHHHTTC--CEEEEECSSCCCHHHHHHHT--------------CEECSSHHHHHHHCSEEEECCCCSGGGTTC
T ss_pred HHHHHHHHHHHhcC--CEEEEECCCCcchhhHhhcC--------------cEEeCCHHHHhccCCEEEEeCCCChHHHHH
Confidence 9999999999 888 89999999875544443333 233357888889999999999975 36665
Q ss_pred H-HHhhhcCCCCCeEEEeccCCccc
Q 012596 216 L-EGISDYVDPGLPFISLSKGLELN 239 (460)
Q Consensus 216 l-~~i~~~l~~~~iIV~~~~Gi~~~ 239 (460)
+ .++.+.+++++++|+++.|-..+
T Consensus 238 i~~~~l~~mk~gailin~srg~~vd 262 (348)
T 2w2k_A 238 IDEAFFAAMKPGSRIVNTARGPVIS 262 (348)
T ss_dssp BCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred hhHHHHhcCCCCCEEEECCCCchhC
Confidence 5 35667788999999999874443
No 105
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.32 E-value=4e-13 Score=135.35 Aligned_cols=162 Identities=10% Similarity=0.090 Sum_probs=113.4
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeec-ccc-chhccCCCeEEEECcchH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRS-KAK-TDILERTNKVVVLGGGSF 138 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~kI~IIGaG~m 138 (460)
+.++.|+|+|+ |.++++||+..... +.....++.++.+.|... + ..+.. ..+ .++ ..++|||||+|.|
T Consensus 106 ~~gI~V~n~~~-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~--~-~~~~~~~~~~~~l--~g~tvGIIG~G~I 179 (347)
T 1mx3_A 106 DLGIAVCNVPA-ASVEETADSTLCHILNLYRRATWLHQALREGTRVQS--V-EQIREVASGAARI--RGETLGIIGLGRV 179 (347)
T ss_dssp HTTCEEECCCS-TTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCS--H-HHHHHHTTTCCCC--TTCEEEEECCSHH
T ss_pred hCCceEEECCC-CCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccc--c-ccccccccCccCC--CCCEEEEEeECHH
Confidence 35789999999 99999999998854 445556677777777320 0 00000 001 233 3689999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-
Q 012596 139 GTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL- 216 (460)
Q Consensus 139 G~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl- 216 (460)
|..+|.+|...| ++|++|+++.+... ..+.| +....+++++++.+|+|++++|.+ .++.++
T Consensus 180 G~~vA~~l~~~G--~~V~~~d~~~~~~~-~~~~g--------------~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 242 (347)
T 1mx3_A 180 GQAVALRAKAFG--FNVLFYDPYLSDGV-ERALG--------------LQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN 242 (347)
T ss_dssp HHHHHHHHHTTT--CEEEEECTTSCTTH-HHHHT--------------CEECSSHHHHHHHCSEEEECCCCCTTCTTSBS
T ss_pred HHHHHHHHHHCC--CEEEEECCCcchhh-HhhcC--------------CeecCCHHHHHhcCCEEEEcCCCCHHHHHHhH
Confidence 999999999888 89999998764311 12222 233347888899999999999964 466665
Q ss_pred HHhhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 217 EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 217 ~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
++..+.+++++++|++++|-..++ +.+.+.+.+
T Consensus 243 ~~~l~~mk~gailIN~arg~~vd~-~aL~~aL~~ 275 (347)
T 1mx3_A 243 DFTVKQMRQGAFLVNTARGGLVDE-KALAQALKE 275 (347)
T ss_dssp HHHHTTSCTTEEEEECSCTTSBCH-HHHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCChHHhH-HHHHHHHHh
Confidence 456678899999999999865543 344455544
No 106
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.32 E-value=6.8e-13 Score=131.62 Aligned_cols=156 Identities=14% Similarity=0.202 Sum_probs=112.8
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|.|. |..+++||+..... +.....++.++++.|++ .. ..+.++ ..++|+|||+|.||.
T Consensus 87 ~~gi~v~n~~g-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~------~~--~~~~~l--~g~~vgIiG~G~IG~ 155 (307)
T 1wwk_A 87 EKGIEVVNAPA-ASSRSVAELAVGLMFSVARKIAFADRKMREGVWAK------KE--AMGIEL--EGKTIGIIGFGRIGY 155 (307)
T ss_dssp HHTCEEECCGG-GGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCT------TT--CCBCCC--TTCEEEEECCSHHHH
T ss_pred hCCcEEEECCC-CChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCc------cC--cCCccc--CCceEEEEccCHHHH
Confidence 35689999999 99999999998854 44555667777776642 10 112234 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchhc-HHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-SSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~~-~~~vl-~~ 218 (460)
.+|..|...| ++|++|+|+++. +...+.|. .. .+++++++++|+|++++|.+. +..++ ++
T Consensus 156 ~~A~~l~~~G--~~V~~~d~~~~~-~~~~~~g~--------------~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~ 217 (307)
T 1wwk_A 156 QVAKIANALG--MNILLYDPYPNE-ERAKEVNG--------------KF-VDLETLLKESDVVTIHVPLVESTYHLINEE 217 (307)
T ss_dssp HHHHHHHHTT--CEEEEECSSCCH-HHHHHTTC--------------EE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCCCh-hhHhhcCc--------------cc-cCHHHHHhhCCEEEEecCCChHHhhhcCHH
Confidence 9999999888 999999998765 33333332 22 268888899999999999654 55555 34
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
..+.+++++++|+++.|-..+. ..+.+.+.+
T Consensus 218 ~l~~mk~ga~lin~arg~~vd~-~aL~~aL~~ 248 (307)
T 1wwk_A 218 RLKLMKKTAILINTSRGPVVDT-NALVKALKE 248 (307)
T ss_dssp HHHHSCTTCEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHhcCCCCeEEEECCCCcccCH-HHHHHHHHh
Confidence 5677889999999998754442 234444543
No 107
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.31 E-value=1.8e-13 Score=136.64 Aligned_cols=154 Identities=12% Similarity=0.224 Sum_probs=109.9
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcc-cchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRD-RRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFG 139 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG 139 (460)
+.++.|+|.|. +..+++||+..... +..... +|.++.+.|+. .. .+.++ ..++|||||+|.||
T Consensus 82 ~~gI~v~n~~g-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~------~~---~~~~l--~gktvGIiGlG~IG 149 (324)
T 3evt_A 82 AAGVVVANTSG-IHADAISESVLAAMLSVVRGYHAAWLNQRGARQWAL------PM---TTSTL--TGQQLLIYGTGQIG 149 (324)
T ss_dssp HTTCEEECCTT-HHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSC------SS---CCCCS--TTCEEEEECCSHHH
T ss_pred HCCcEEEECCC-cCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCccc------CC---CCccc--cCCeEEEECcCHHH
Confidence 35799999998 99999999998854 333334 55566665533 21 12334 36899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-H
Q 012596 140 TAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-E 217 (460)
Q Consensus 140 ~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~ 217 (460)
..+|.+|...| ++|++|+|+++..+ +. .......++++++++||+|++++|.+ .+..++ .
T Consensus 150 ~~vA~~l~~~G--~~V~~~dr~~~~~~-----~~-----------~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~ 211 (324)
T 3evt_A 150 QSLAAKASALG--MHVIGVNTTGHPAD-----HF-----------HETVAFTATADALATANFIVNALPLTPTTHHLFST 211 (324)
T ss_dssp HHHHHHHHHTT--CEEEEEESSCCCCT-----TC-----------SEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSH
T ss_pred HHHHHHHHhCC--CEEEEECCCcchhH-----hH-----------hhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCH
Confidence 99999999888 99999999863211 00 01122357788899999999999954 556555 4
Q ss_pred HhhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 218 GISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 218 ~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
+....+++++++|++++|-..++ ..+.+.+.
T Consensus 212 ~~l~~mk~gailIN~aRG~~vd~-~aL~~aL~ 242 (324)
T 3evt_A 212 ELFQQTKQQPMLINIGRGPAVDT-TALMTALD 242 (324)
T ss_dssp HHHHTCCSCCEEEECSCGGGBCH-HHHHHHHH
T ss_pred HHHhcCCCCCEEEEcCCChhhhH-HHHHHHHH
Confidence 56677899999999999876653 23334443
No 108
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.30 E-value=1.4e-12 Score=131.85 Aligned_cols=150 Identities=13% Similarity=0.137 Sum_probs=110.8
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|.|+ |..+++||+..... +.....++.++.+.| .|.... ...+.++ ..++|||||+|.||.
T Consensus 118 ~~GI~V~n~~~-~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~----~w~~~~-~~~~~~l--~gktvGIIGlG~IG~ 189 (365)
T 4hy3_A 118 QRGIHVVTTGQ-VFAEPVAEIGLGFALALARGIVDADIAFQEGTE----LWGGEG-NASARLI--AGSEIGIVGFGDLGK 189 (365)
T ss_dssp HSCCEEEECGG-GGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCC----CCSSSS-TTSCCCS--SSSEEEEECCSHHHH
T ss_pred cCCeEEEeCCC-ccchHHHHHHHHHHHHHHhchhHHHHHHHcCCc----cccccc-ccccccc--CCCEEEEecCCcccH
Confidence 35799999998 99999999998844 666777888888875 143211 1123344 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|.+|...| ++|++|+++... +...+.|. . ..+++++++.||+|++++|.+ .++.++ .+
T Consensus 190 ~vA~~l~~fG--~~V~~~d~~~~~-~~~~~~g~--------------~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~ 251 (365)
T 4hy3_A 190 ALRRVLSGFR--ARIRVFDPWLPR-SMLEENGV--------------E-PASLEDVLTKSDFIFVVAAVTSENKRFLGAE 251 (365)
T ss_dssp HHHHHHTTSC--CEEEEECSSSCH-HHHHHTTC--------------E-ECCHHHHHHSCSEEEECSCSSCC---CCCHH
T ss_pred HHHHhhhhCC--CEEEEECCCCCH-HHHhhcCe--------------e-eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHH
Confidence 9999998777 999999998532 33333331 2 247889999999999999964 566665 45
Q ss_pred hhhcCCCCCeEEEeccCCccch
Q 012596 219 ISDYVDPGLPFISLSKGLELNT 240 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~ 240 (460)
....+++++++|+++.|-..++
T Consensus 252 ~l~~mk~gailIN~aRG~~vde 273 (365)
T 4hy3_A 252 AFSSMRRGAAFILLSRADVVDF 273 (365)
T ss_dssp HHHTSCTTCEEEECSCGGGSCH
T ss_pred HHhcCCCCcEEEECcCCchhCH
Confidence 6778899999999999866654
No 109
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.30 E-value=1.2e-12 Score=134.30 Aligned_cols=153 Identities=14% Similarity=0.146 Sum_probs=112.4
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|.|. +..+++||+..... +.....++.++++.|++ .. ..+.++ ..++|||||+|.||.
T Consensus 90 ~~GI~V~n~p~-~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~------~~--~~~~el--~gktlGiIGlG~IG~ 158 (404)
T 1sc6_A 90 KRGIPVFNAPF-SNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNK------LA--AGSFEA--RGKKLGIIGYGHIGT 158 (404)
T ss_dssp HTTCCEECCTT-TTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-------------CCCS--TTCEEEEECCSHHHH
T ss_pred hCCCEEEecCc-ccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccc------cC--CCcccc--CCCEEEEEeECHHHH
Confidence 45689999999 99999999998844 55556677778887743 11 112334 468999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|.++...| ++|++|||++.. ..+ .+....+++++++.||+|++++|.+ .++.++ ++
T Consensus 159 ~vA~~l~~~G--~~V~~~d~~~~~-----~~~-------------~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 218 (404)
T 1sc6_A 159 QLGILAESLG--MYVYFYDIENKL-----PLG-------------NATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAK 218 (404)
T ss_dssp HHHHHHHHTT--CEEEEECSSCCC-----CCT-------------TCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHH
T ss_pred HHHHHHHHCC--CEEEEEcCCchh-----ccC-------------CceecCCHHHHHhcCCEEEEccCCChHHHHHhhHH
Confidence 9999999888 999999997531 000 1334458899999999999999965 466655 44
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
....+++++++|++++|-..++ ..+.+.+.
T Consensus 219 ~l~~mk~ga~lIN~aRg~~vd~-~aL~~aL~ 248 (404)
T 1sc6_A 219 EISLMKPGSLLINASRGTVVDI-PALADALA 248 (404)
T ss_dssp HHHHSCTTEEEEECSCSSSBCH-HHHHHHHH
T ss_pred HHhhcCCCeEEEECCCChHHhH-HHHHHHHH
Confidence 6677899999999999866553 23444443
No 110
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=99.29 E-value=1.4e-12 Score=130.72 Aligned_cols=154 Identities=14% Similarity=0.125 Sum_probs=111.4
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|+ |.++++||+..... +.....++.++++.|. |... ..+.++ ..++|||||+|.||.
T Consensus 89 ~~gI~v~n~p~-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~----~~~~---~~~~~l--~g~~vgIiG~G~IG~ 158 (333)
T 1dxy_A 89 QYGIRLSNVPA-YSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYE----KAGT---FIGKEL--GQQTVGVMGTGHIGQ 158 (333)
T ss_dssp HTTCEEECCTT-SCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHH----HHTC---CCCCCG--GGSEEEEECCSHHHH
T ss_pred hCCCEEEeCCC-CCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcc----cccC---CCccCC--CCCEEEEECcCHHHH
Confidence 45789999999 99999999998854 5555667777888772 4111 122334 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchhc-HHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-SSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~~-~~~vl-~~ 218 (460)
.+|.+|...| ++|++|+|+.+.. + +. .+.. .+++++++.+|+|++++|.+. +..++ ++
T Consensus 159 ~~A~~l~~~G--~~V~~~d~~~~~~--~-~~--------------~~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~~~ 218 (333)
T 1dxy_A 159 VAIKLFKGFG--AKVIAYDPYPMKG--D-HP--------------DFDY-VSLEDLFKQSDVIDLHVPGIEQNTHIINEA 218 (333)
T ss_dssp HHHHHHHHTT--CEEEEECSSCCSS--C-CT--------------TCEE-CCHHHHHHHCSEEEECCCCCGGGTTSBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCcchh--h-Hh--------------cccc-CCHHHHHhcCCEEEEcCCCchhHHHHhCHH
Confidence 9999999888 9999999986321 0 00 0122 378888999999999999653 55555 45
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
..+.+++++++|+++.|-..++ ..+.+.+.
T Consensus 219 ~l~~mk~ga~lIn~srg~~vd~-~aL~~aL~ 248 (333)
T 1dxy_A 219 AFNLMKPGAIVINTARPNLIDT-QAMLSNLK 248 (333)
T ss_dssp HHHHSCTTEEEEECSCTTSBCH-HHHHHHHH
T ss_pred HHhhCCCCcEEEECCCCcccCH-HHHHHHHH
Confidence 6677899999999998865543 23334443
No 111
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.29 E-value=9.4e-13 Score=139.98 Aligned_cols=155 Identities=13% Similarity=0.179 Sum_probs=115.0
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.++|.|. +...++||+..... +.....++.++.+.|++. .+. +.++ ..++|+|||+|.||.
T Consensus 87 ~~gi~v~n~p~-~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~-----~~~---~~~l--~g~~vgIIG~G~IG~ 155 (529)
T 1ygy_A 87 ARGVLVVNAPT-SNIHSAAEHALALLLAASRQIPAADASLREHTWKRS-----SFS---GTEI--FGKTVGVVGLGRIGQ 155 (529)
T ss_dssp HTTCEEECCTT-SSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGG-----GCC---BCCC--TTCEEEEECCSHHHH
T ss_pred hCCeEEEECCC-cchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCccc-----CcC---cccc--CCCEEEEEeeCHHHH
Confidence 45789999999 99999999998844 555566777777777431 111 2234 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHHHH-
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLEG- 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl~~- 218 (460)
.+|.+|...| ++|++||++... +...+.|. ... ++++++++||+|++|+|.+ .+..++.+
T Consensus 156 ~vA~~l~~~G--~~V~~~d~~~~~-~~a~~~g~--------------~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~ 217 (529)
T 1ygy_A 156 LVAQRIAAFG--AYVVAYDPYVSP-ARAAQLGI--------------ELL-SLDDLLARADFISVHLPKTPETAGLIDKE 217 (529)
T ss_dssp HHHHHHHTTT--CEEEEECTTSCH-HHHHHHTC--------------EEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHH
T ss_pred HHHHHHHhCC--CEEEEECCCCCh-hHHHhcCc--------------EEc-CHHHHHhcCCEEEECCCCchHHHHHhCHH
Confidence 9999999888 899999997642 33333342 223 6888889999999999977 67777654
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
+.+.+++++++|++++|-..+. ..+.+.+.
T Consensus 218 ~~~~~k~g~ilin~arg~iv~~-~aL~~al~ 247 (529)
T 1ygy_A 218 ALAKTKPGVIIVNAARGGLVDE-AALADAIT 247 (529)
T ss_dssp HHTTSCTTEEEEECSCTTSBCH-HHHHHHHH
T ss_pred HHhCCCCCCEEEECCCCchhhH-HHHHHHHH
Confidence 6778899999999998866553 23334443
No 112
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.29 E-value=1.6e-12 Score=133.29 Aligned_cols=153 Identities=14% Similarity=0.176 Sum_probs=110.9
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|.|. |..+++||+..... +.....++.++++.|++ .. ..+.++ ..++|||||+|.||.
T Consensus 101 ~~GI~V~n~p~-~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~------~~--~~~~el--~gktvGIIGlG~IG~ 169 (416)
T 3k5p_A 101 KRGIPVFNAPF-SNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEK------TA--IGSREV--RGKTLGIVGYGNIGS 169 (416)
T ss_dssp HTTCCEECCSS-TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC------CC--TTCCCS--TTCEEEEECCSHHHH
T ss_pred hcCcEEEeCCC-cccHHHHHHHHHHHHHHhcccHHHHHhhhcccccc------cC--CCCccC--CCCEEEEEeeCHHHH
Confidence 35789999998 99999999998844 55556677777777744 11 112334 468999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|.++...| ++|++||+++... . .......+++++++.||+|++++|.+ .++.++ .+
T Consensus 170 ~vA~~l~~~G--~~V~~yd~~~~~~----~--------------~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~ 229 (416)
T 3k5p_A 170 QVGNLAESLG--MTVRYYDTSDKLQ----Y--------------GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEA 229 (416)
T ss_dssp HHHHHHHHTT--CEEEEECTTCCCC----B--------------TTBEECSSHHHHHHHCSEEEECCCC-----CCBCHH
T ss_pred HHHHHHHHCC--CEEEEECCcchhc----c--------------cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHH
Confidence 9999999888 9999999874210 0 01234468999999999999999964 455555 45
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
....+++++++|++++|-..++ ..+.+.+.
T Consensus 230 ~l~~mk~gailIN~aRG~vvd~-~aL~~aL~ 259 (416)
T 3k5p_A 230 KLRKMKKGAFLINNARGSDVDL-EALAKVLQ 259 (416)
T ss_dssp HHHHSCTTEEEEECSCTTSBCH-HHHHHHHH
T ss_pred HHhhCCCCcEEEECCCChhhhH-HHHHHHHH
Confidence 5677899999999999876654 23344443
No 113
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=99.28 E-value=1.5e-12 Score=130.41 Aligned_cols=155 Identities=12% Similarity=0.101 Sum_probs=110.8
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|+ |.++++||+..... +.....++.++.+.|. |. ....+.++ ..++|||||+|.||.
T Consensus 90 ~~gI~v~n~p~-~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~----~~---~~~~~~~l--~g~~vgIiG~G~IG~ 159 (331)
T 1xdw_A 90 ELGFPMAFVPR-YSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFK----VD---AFMFSKEV--RNCTVGVVGLGRIGR 159 (331)
T ss_dssp HTTCCEECCCC-CCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC----CC---STTCCCCG--GGSEEEEECCSHHHH
T ss_pred hCCcEEEeCCC-CCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCc----cc---cCcCccCC--CCCEEEEECcCHHHH
Confidence 35789999999 99999999998854 4555667777777662 31 11122334 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|.+|...| ++|++|+|+++.. + +. .+. ..+++++++.+|+|++++|.+ .++.++ ++
T Consensus 160 ~~A~~l~~~G--~~V~~~d~~~~~~--~-~~--------------~~~-~~~l~ell~~aDvV~~~~p~t~~t~~li~~~ 219 (331)
T 1xdw_A 160 VAAQIFHGMG--ATVIGEDVFEIKG--I-ED--------------YCT-QVSLDEVLEKSDIITIHAPYIKENGAVVTRD 219 (331)
T ss_dssp HHHHHHHHTT--CEEEEECSSCCCS--C-TT--------------TCE-ECCHHHHHHHCSEEEECCCCCTTTCCSBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCccHH--H-Hh--------------ccc-cCCHHHHHhhCCEEEEecCCchHHHHHhCHH
Confidence 9999999888 9999999976321 0 00 012 237888889999999999964 455554 34
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
..+.+++++++|++++|-..++ ..+.+.+.+
T Consensus 220 ~l~~mk~ga~lin~srg~~vd~-~aL~~aL~~ 250 (331)
T 1xdw_A 220 FLKKMKDGAILVNCARGQLVDT-EAVIEAVES 250 (331)
T ss_dssp HHHTSCTTEEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCcccccH-HHHHHHHHh
Confidence 5667889999999998865543 344444443
No 114
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.28 E-value=1.1e-12 Score=130.29 Aligned_cols=144 Identities=15% Similarity=0.168 Sum_probs=108.1
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|.|+ |...++||+..... +.....++.++++.|+. |.+.. ..+.++ ..++|||||+|.||.
T Consensus 86 ~~gi~v~n~~~-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~~~~~--~~~~~l--~g~~vgIIG~G~IG~ 157 (311)
T 2cuk_A 86 ERGIRVTHTPG-VLTEATADLTLALLLAVARRVVEGAAYARDGLWKA---WHPEL--LLGLDL--QGLTLGLVGMGRIGQ 157 (311)
T ss_dssp TTTCEEECCCS-TTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC---CCTTT--TCBCCC--TTCEEEEECCSHHHH
T ss_pred hCCcEEEECCC-CChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCc---ccccc--ccCcCC--CCCEEEEEEECHHHH
Confidence 56799999999 99999999998854 55556677788887742 22110 112233 468999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHHH-H
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLE-G 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl~-~ 218 (460)
.+|.+|...| ++|++|+|+.+..+ +. ..+++++++.+|+|++++|.+ .+..++. +
T Consensus 158 ~~A~~l~~~G--~~V~~~d~~~~~~~--------------------~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~ 214 (311)
T 2cuk_A 158 AVAKRALAFG--MRVVYHARTPKPLP--------------------YP-FLSLEELLKEADVVSLHTPLTPETHRLLNRE 214 (311)
T ss_dssp HHHHHHHHTT--CEEEEECSSCCSSS--------------------SC-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCCcccc--------------------cc-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHH
Confidence 9999999888 89999999864211 01 236888889999999999976 4666553 4
Q ss_pred hhhcCCCCCeEEEeccCCccc
Q 012596 219 ISDYVDPGLPFISLSKGLELN 239 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~ 239 (460)
..+.+++++++|+++.|-..+
T Consensus 215 ~l~~mk~ga~lin~srg~~vd 235 (311)
T 2cuk_A 215 RLFAMKRGAILLNTARGALVD 235 (311)
T ss_dssp HHTTSCTTCEEEECSCGGGBC
T ss_pred HHhhCCCCcEEEECCCCCccC
Confidence 566789999999999875544
No 115
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.28 E-value=5.2e-12 Score=124.97 Aligned_cols=151 Identities=17% Similarity=0.211 Sum_probs=109.9
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.+..++|.|+ +...++||+..... +.....++.++++.|+. ... ..++ ..++|||||+|.||.
T Consensus 70 ~~gi~v~~~~~-~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~------~~~---~~~l--~g~~vgIIG~G~IG~ 137 (303)
T 1qp8_A 70 PPHVTVAGNAG-SNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGR------DVE---IPLI--QGEKVAVLGLGEIGT 137 (303)
T ss_dssp CTTSCEECCCS-SSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC------CSC---CCCC--TTCEEEEESCSTHHH
T ss_pred hcCCEEEECCC-CCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC------CCC---CCCC--CCCEEEEEccCHHHH
Confidence 45789999998 66669999998844 55556677777777732 111 1123 368999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHHH-H
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLE-G 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl~-~ 218 (460)
.+|.+|...| ++|++|+|+++ +. +. ....+++++++.||+|++++|.. .+..++. +
T Consensus 138 ~~A~~l~~~G--~~V~~~dr~~~--~~----~~--------------~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~ 195 (303)
T 1qp8_A 138 RVGKILAALG--AQVRGFSRTPK--EG----PW--------------RFTNSLEEALREARAAVCALPLNKHTRGLVKYQ 195 (303)
T ss_dssp HHHHHHHHTT--CEEEEECSSCC--CS----SS--------------CCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHH
T ss_pred HHHHHHHHCC--CEEEEECCCcc--cc----Cc--------------ccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHH
Confidence 9999999888 89999999864 10 11 11236788899999999999976 4666663 5
Q ss_pred hhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 219 ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
..+.+++++++|++++|-..++ ..+.+.+.+
T Consensus 196 ~l~~mk~gailin~srg~~vd~-~aL~~aL~~ 226 (303)
T 1qp8_A 196 HLALMAEDAVFVNVGRAEVLDR-DGVLRILKE 226 (303)
T ss_dssp HHTTSCTTCEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HHhhCCCCCEEEECCCCcccCH-HHHHHHHHh
Confidence 6778999999999998755443 334444543
No 116
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.28 E-value=1.4e-10 Score=116.36 Aligned_cols=155 Identities=19% Similarity=0.264 Sum_probs=107.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHH-HHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAV-CQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~-~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
+.|||+|||+|.||.++|..|.+.| ++|++|+|+++. .+...+.| +.++ +++++++++|+||
T Consensus 15 ~~~~I~IIG~G~mG~alA~~L~~~G--~~V~~~~~~~~~~~~~a~~~G--------------~~~~-~~~e~~~~aDvVi 77 (338)
T 1np3_A 15 QGKKVAIIGYGSQGHAHACNLKDSG--VDVTVGLRSGSATVAKAEAHG--------------LKVA-DVKTAVAAADVVM 77 (338)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHTT--------------CEEE-CHHHHHHTCSEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHHCc--CEEEEEECChHHHHHHHHHCC--------------CEEc-cHHHHHhcCCEEE
Confidence 3579999999999999999999999 899999998765 44444443 2334 7778889999999
Q ss_pred EccchhcHHHHHH-HhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEE--EEECcccHH-HHhc---cCCe
Q 012596 205 HAMPVQFSSSFLE-GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI--ALSGPSFAL-ELMN---KLPT 277 (460)
Q Consensus 205 laVp~~~~~~vl~-~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~--v~~gP~~a~-e~~~---g~~~ 277 (460)
+|||.....++++ ++.+.++++++|+++ .|+.. .+..........+. .-.||.++. ++.. |.+.
T Consensus 78 lavp~~~~~~v~~~~i~~~l~~~~ivi~~-~gv~~--------~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ 148 (338)
T 1np3_A 78 ILTPDEFQGRLYKEEIEPNLKKGATLAFA-HGFSI--------HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPD 148 (338)
T ss_dssp ECSCHHHHHHHHHHHTGGGCCTTCEEEES-CCHHH--------HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCE
T ss_pred EeCCcHHHHHHHHHHHHhhCCCCCEEEEc-CCchh--------HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeE
Confidence 9999999899998 999999999998876 45432 11111111111111 124666543 3333 5555
Q ss_pred EEEEc-cCCHHHHHHHHHHHhcCCc-e--EEEc
Q 012596 278 AMVVA-SKDRKLANAVQQLLASKHL-R--ISTS 306 (460)
Q Consensus 278 ~i~i~-~~d~~~~~~l~~lL~~~g~-~--v~~~ 306 (460)
.+... ..+.+..+.+.++++..|. + +...
T Consensus 149 ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~ 181 (338)
T 1np3_A 149 LIAIYQDASGNAKNVALSYACGVGGGRTGIIET 181 (338)
T ss_dssp EEEEEECSSSCHHHHHHHHHHHTTHHHHCEEEC
T ss_pred EEEecCCCCHHHHHHHHHHHHHcCCCccceEee
Confidence 43433 3345677889999999887 4 5544
No 117
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.25 E-value=8.2e-13 Score=129.79 Aligned_cols=149 Identities=10% Similarity=0.110 Sum_probs=108.1
Q ss_pred CceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHHH
Q 012596 66 DNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTA 141 (460)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~ 141 (460)
..+++++++. |+ .++||+..... +.....++.++.+.|+.. .+ .++ ..++|||||+|.||..
T Consensus 71 ~~~~~~~~~~-~~-~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~-----~~-----~~l--~g~tvGIIGlG~IG~~ 136 (290)
T 3gvx_A 71 NVVLCSNAGA-YS-ISVAEHAFALLLAHAKNILENNELMKAGIFRQS-----PT-----TLL--YGKALGILGYGGIGRR 136 (290)
T ss_dssp TSEEECCHHH-HH-HHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CC-----CCC--TTCEEEEECCSHHHHH
T ss_pred ceEEeecCCc-ce-eeHHHHHHHHHHHHHHhhhhhhhHhhhcccccC-----Cc-----eee--ecchheeeccCchhHH
Confidence 4567777654 65 69999998744 555566777777777431 11 123 3689999999999999
Q ss_pred HHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccch-hcHHHHH-HHh
Q 012596 142 MAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGI 219 (460)
Q Consensus 142 ~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~~~~vl-~~i 219 (460)
+|.+|...| ++|++|+|+++..+ .+...+++++++++||+|++++|. ..++.++ .+.
T Consensus 137 vA~~l~~~G--~~V~~~dr~~~~~~-------------------~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~ 195 (290)
T 3gvx_A 137 VAHLAKAFG--MRVIAYTRSSVDQN-------------------VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRL 195 (290)
T ss_dssp HHHHHHHHT--CEEEEECSSCCCTT-------------------CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHH
T ss_pred HHHHHHhhC--cEEEEEeccccccc-------------------cccccCChHHHhhccCeEEEEeeccccchhhhhHHH
Confidence 999999988 99999999863211 023455889999999999999995 4566555 456
Q ss_pred hhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 220 SDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 220 ~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
.+.+++++++|++++|-..++ +.+.+.+.+
T Consensus 196 l~~mk~gailIN~aRG~~vd~-~aL~~aL~~ 225 (290)
T 3gvx_A 196 LANARKNLTIVNVARADVVSK-PDMIGFLKE 225 (290)
T ss_dssp HTTCCTTCEEEECSCGGGBCH-HHHHHHHHH
T ss_pred HhhhhcCceEEEeehhcccCC-cchhhhhhh
Confidence 788899999999998876653 344444443
No 118
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.24 E-value=6.2e-13 Score=132.23 Aligned_cols=153 Identities=10% Similarity=0.146 Sum_probs=107.7
Q ss_pred CCceeecCCCCCCC-CCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHH
Q 012596 65 NDNTIITPYPDDPD-PEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFG 139 (460)
Q Consensus 65 ~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG 139 (460)
..++.|++.|+ +. ..++||+..... +.....++.++.+.|+. . ...++ ..++|||||+|.||
T Consensus 85 ~~gi~v~~~~~-~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~------~----~~~~l--~g~tvGIiG~G~IG 151 (315)
T 3pp8_A 85 DASIPLFRLED-TGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKP------L----PEYTR--EEFSVGIMGAGVLG 151 (315)
T ss_dssp CTTSCEEEC---CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC------C----CCCCS--TTCCEEEECCSHHH
T ss_pred cCCCEEEEcCC-CCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCC------C----CCCCc--CCCEEEEEeeCHHH
Confidence 34778899998 53 689999998854 55555666777776643 1 12234 36899999999999
Q ss_pred HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccch-hcHHHHH-H
Q 012596 140 TAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-E 217 (460)
Q Consensus 140 ~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~~~~vl-~ 217 (460)
..+|.+|...| ++|++|+|+++..+ +. . ......++++++++||+|++++|. ..++.++ .
T Consensus 152 ~~vA~~l~~~G--~~V~~~dr~~~~~~-----~~--~---------~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~ 213 (315)
T 3pp8_A 152 AKVAESLQAWG--FPLRCWSRSRKSWP-----GV--E---------SYVGREELRAFLNQTRVLINLLPNTAQTVGIINS 213 (315)
T ss_dssp HHHHHHHHTTT--CCEEEEESSCCCCT-----TC--E---------EEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSH
T ss_pred HHHHHHHHHCC--CEEEEEcCCchhhh-----hh--h---------hhcccCCHHHHHhhCCEEEEecCCchhhhhhccH
Confidence 99999999888 99999999864211 10 0 001114788889999999999995 4566666 5
Q ss_pred HhhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 218 GISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 218 ~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
+....+++++++|++++|-..++ ..+.+.+.
T Consensus 214 ~~l~~mk~gailIN~aRG~~vd~-~aL~~aL~ 244 (315)
T 3pp8_A 214 ELLDQLPDGAYVLNLARGVHVQE-ADLLAALD 244 (315)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCH-HHHHHHHH
T ss_pred HHHhhCCCCCEEEECCCChhhhH-HHHHHHHH
Confidence 66778899999999999876654 23444443
No 119
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.22 E-value=1.6e-10 Score=119.49 Aligned_cols=157 Identities=15% Similarity=0.127 Sum_probs=105.6
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhc------CCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANK------KSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTA 196 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~------G~~~~V~v~~r~~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (460)
+..++||+|||+|+||.++|..|.++ | ++|++++|... ..+...+.|.... . ....++.++
T Consensus 51 L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G--~~ViVg~r~~sks~e~A~e~G~~v~-------d---~ta~s~aEA 118 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKIGLRKGSKSFDEARAAGFTEE-------S---GTLGDIWET 118 (525)
T ss_dssp TTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCC--CEEEEEECTTCSCHHHHHHTTCCTT-------T---TCEEEHHHH
T ss_pred hcCCCEEEEEeEhHHHHHHHHHHHhcccccCCC--CEEEEEeCCchhhHHHHHHCCCEEe-------c---CCCCCHHHH
Confidence 43338999999999999999999998 8 89988777543 3344445554210 0 012367888
Q ss_pred cCCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHH---HhCCCCCCEEEEECcccHHHH--
Q 012596 197 LLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ---ALRNPRQPFIALSGPSFALEL-- 271 (460)
Q Consensus 197 ~~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~---~lg~~~~~~~v~~gP~~a~e~-- 271 (460)
++++|+||++||.....+++++|.++++++++ |++..|+... .+.+ .++. .. -.+...|..+...
T Consensus 119 a~~ADVVILaVP~~~~~eVl~eI~p~LK~GaI-Ls~AaGf~I~-------~le~~~i~~p~-dv-~VVrVmPNtPg~~VR 188 (525)
T 3fr7_A 119 VSGSDLVLLLISDAAQADNYEKIFSHMKPNSI-LGLSHGFLLG-------HLQSAGLDFPK-NI-SVIAVCPKGMGPSVR 188 (525)
T ss_dssp HHHCSEEEECSCHHHHHHHHHHHHHHSCTTCE-EEESSSHHHH-------HHHHTTCCCCT-TS-EEEEEEESSCHHHHH
T ss_pred HhcCCEEEECCChHHHHHHHHHHHHhcCCCCe-EEEeCCCCHH-------HHhhhcccCCC-CC-cEEEEecCCCchhHH
Confidence 99999999999998888899999999999987 5777777643 2332 2222 12 2355566554432
Q ss_pred -----h-----ccCCeEEEEcc-CCHHHHHHHHHHHhcCCce
Q 012596 272 -----M-----NKLPTAMVVAS-KDRKLANAVQQLLASKHLR 302 (460)
Q Consensus 272 -----~-----~g~~~~i~i~~-~d~~~~~~l~~lL~~~g~~ 302 (460)
+ .|.+..+.+.. .+.+..+.+..++...|..
T Consensus 189 ~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~ 230 (525)
T 3fr7_A 189 RLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSP 230 (525)
T ss_dssp HHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCS
T ss_pred HHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCC
Confidence 2 34444444432 2346778889999988864
No 120
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.15 E-value=5.6e-10 Score=110.85 Aligned_cols=199 Identities=14% Similarity=0.137 Sum_probs=127.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-----------hhcCCCccCCCCCCCCceEEeCCHHh
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN-----------EKHCNCRYFPEQKLPENVIATTDAKT 195 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~-----------~~g~~~~~~~~~~l~~~i~a~~~~~e 195 (460)
..||+|||+|.||+.+|..++.+| ++|++||++++.+++.. +.|...........-..+..++|+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHh
Confidence 468999999999999999999999 99999999987654322 11110000000001134677889999
Q ss_pred hcCCCcEEEEccchh--cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCC-CCEEEEECcccHHHHh
Q 012596 196 ALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR-QPFIALSGPSFALELM 272 (460)
Q Consensus 196 a~~~aDiVilaVp~~--~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~-~~~~v~~gP~~a~e~~ 272 (460)
++++||+||-+||.. .-.+++.+|.++++++++|-+-+.|+.+.. +.+....+. .-......|.+...
T Consensus 84 a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~-------ia~~~~~p~r~ig~HffNP~~~m~-- 154 (319)
T 3ado_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSK-------LFTGLAHVKQCIVAHPVNPPYYIP-- 154 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHH-------HHTTCTTGGGEEEEEECSSTTTCC--
T ss_pred HhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchh-------hhhhccCCCcEEEecCCCCccccc--
Confidence 999999999999964 346799999999999999988888887642 223222210 11112334443221
Q ss_pred ccCCeEEEEcc-CCHHHHHHHHHHHhcCCceEE-EcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHH
Q 012596 273 NKLPTAMVVAS-KDRKLANAVQQLLASKHLRIS-TSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEI 350 (460)
Q Consensus 273 ~g~~~~i~i~~-~d~~~~~~l~~lL~~~g~~v~-~~~Di~g~~~~kalkNv~ai~~g~~~~~kl~~n~~~al~~~~~~E~ 350 (460)
..-++-+. .+++.++++.+++...|.... ...|..|-. ...+....++|+
T Consensus 155 ---LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~pGFi-------------------------~NRl~~~~~~EA 206 (319)
T 3ado_A 155 ---LVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFV-------------------------LNRLQYAIISEA 206 (319)
T ss_dssp ---EEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTTT-------------------------HHHHHHHHHHHH
T ss_pred ---hHHhcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCCCCEe-------------------------HHHHHHHHHHHH
Confidence 11222222 467899999999999986654 556654421 123345566777
Q ss_pred HHHHHHcCCCcccc
Q 012596 351 RWLATKMGAKPATI 364 (460)
Q Consensus 351 ~~la~a~Gi~~~~~ 364 (460)
+.+.+.-+.+++++
T Consensus 207 ~~lv~eGvas~edI 220 (319)
T 3ado_A 207 WRLVEEGIVSPSDL 220 (319)
T ss_dssp HHHHHTTSSCHHHH
T ss_pred HHHHHhCCCCHHHH
Confidence 77776666665543
No 121
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=99.13 E-value=3e-11 Score=121.09 Aligned_cols=147 Identities=18% Similarity=0.206 Sum_probs=106.9
Q ss_pred CCceeecCCCCCCCCCcccccccccc----ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR----TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGT 140 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~ 140 (460)
+.++.|+|+|+ |.+.++||+..... +...+.++.++++.|.. |....+.++ ..++|||||.|++|.
T Consensus 85 ~~gI~v~n~p~-~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~l--~g~tvGIiG~G~IG~ 154 (334)
T 3kb6_A 85 KKGILVTHIPA-YSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQ-------DSEILAREL--NRLTLGVIGTGRIGS 154 (334)
T ss_dssp HHTCEEECCTT-SCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC-------CGGGCBCCG--GGSEEEEECCSHHHH
T ss_pred HCCCEEEECCC-cCcHHHHHHHHHHHHHHhhcccccccccccccccc-------cccccccee--cCcEEEEECcchHHH
Confidence 45789999999 99999999988744 44444555556665522 222223345 367999999999999
Q ss_pred HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-cHHHHH-HH
Q 012596 141 AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EG 218 (460)
Q Consensus 141 ~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~~~~vl-~~ 218 (460)
.+|.++..-| .+|.+||+..... ..+.+ +. ..+++++++.||+|++++|.+ .++.++ .+
T Consensus 155 ~va~~~~~fg--~~v~~~d~~~~~~--~~~~~--------------~~-~~~l~ell~~sDivslh~Plt~~T~~li~~~ 215 (334)
T 3kb6_A 155 RVAMYGLAFG--MKVLCYDVVKRED--LKEKG--------------CV-YTSLDELLKESDVISLHVPYTKETHHMINEE 215 (334)
T ss_dssp HHHHHHHHTT--CEEEEECSSCCHH--HHHTT--------------CE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHH
T ss_pred HHHHhhcccC--ceeeecCCccchh--hhhcC--------------ce-ecCHHHHHhhCCEEEEcCCCChhhccCcCHH
Confidence 9999999777 9999999875421 22222 12 247889999999999999954 456555 34
Q ss_pred hhhcCCCCCeEEEeccCCccch
Q 012596 219 ISDYVDPGLPFISLSKGLELNT 240 (460)
Q Consensus 219 i~~~l~~~~iIV~~~~Gi~~~~ 240 (460)
....+++++++|+++.|-..++
T Consensus 216 ~l~~mk~~a~lIN~aRG~iVde 237 (334)
T 3kb6_A 216 RISLMKDGVYLINTARGKVVDT 237 (334)
T ss_dssp HHHHSCTTEEEEECSCGGGBCH
T ss_pred HHhhcCCCeEEEecCccccccH
Confidence 5567899999999999976654
No 122
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.08 E-value=9e-10 Score=104.41 Aligned_cols=131 Identities=17% Similarity=0.150 Sum_probs=94.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.|||+|||+|.||++||..|.++| ++|++|++. ++ +++|| |+|
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G--~~V~~~~~~--------------------------------~~-~~~aD--ila 48 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVG--HYVTVLHAP--------------------------------ED-IRDFE--LVV 48 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTT--CEEEECSSG--------------------------------GG-GGGCS--EEE
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCC--CEEEEecCH--------------------------------HH-hccCC--EEE
Confidence 589999999999999999999999 999999873 11 35688 999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEE-ECcccHHHHhccCCeEEEEccCC
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL-SGPSFALELMNKLPTAMVVASKD 285 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~-~gP~~a~e~~~g~~~~i~i~~~d 285 (460)
||...+.++++++.+.+++++++++++..+..+ .+ +.+.+ .|. .++ .-|.. +.. ..+...+
T Consensus 49 vP~~ai~~vl~~l~~~l~~g~ivvd~sgs~~~~---vl-~~~~~-~g~-----~fvg~HPm~------g~~--~~i~a~d 110 (232)
T 3dfu_A 49 IDAHGVEGYVEKLSAFARRGQMFLHTSLTHGIT---VM-DPLET-SGG-----IVMSAHPIG------QDR--WVASALD 110 (232)
T ss_dssp ECSSCHHHHHHHHHTTCCTTCEEEECCSSCCGG---GG-HHHHH-TTC-----EEEEEEEEE------TTE--EEEEESS
T ss_pred EcHHHHHHHHHHHHHhcCCCCEEEEECCcCHHH---HH-HHHHh-CCC-----cEEEeeeCC------CCc--eeeeCCC
Confidence 999999999999999999999999987433322 11 12222 132 122 12332 222 2334457
Q ss_pred HHHHHHHHHHHhcCCceEEEcCChHHH
Q 012596 286 RKLANAVQQLLASKHLRISTSSDVTGV 312 (460)
Q Consensus 286 ~~~~~~l~~lL~~~g~~v~~~~Di~g~ 312 (460)
.+.++.++++++..|.+++..++-...
T Consensus 111 ~~a~~~l~~L~~~lG~~vv~~~~~~hd 137 (232)
T 3dfu_A 111 ELGETIVGLLVGELGGSIVEIADDKRA 137 (232)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCGGGHH
T ss_pred HHHHHHHHHHHHHhCCEEEEeCHHHHh
Confidence 888999999999999888877654443
No 123
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.01 E-value=1.2e-09 Score=108.17 Aligned_cols=103 Identities=12% Similarity=0.304 Sum_probs=76.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHH--HHH-hhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQ--SIN-EKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~--~V~v~~r~~~~~~--~l~-~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
+|||+|||+|+||+++|..|+.+| + +|++||+++++++ .+. ..+. .+.+ +..+..+++. ++++++|
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g--~~~~V~l~d~~~~~~~~~~~~~~~~~--~~~~----~~~v~~~~~~-~~~~~aD 77 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRG--IAREIVLEDIAKERVEAEVLDMQHGS--SFYP----TVSIDGSDDP-EICRDAD 77 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSSHHHHHHHHHHHHHTG--GGST----TCEEEEESCG-GGGTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCChhHHHHHHHHHHhhh--hhcC----CeEEEeCCCH-HHhCCCC
Confidence 589999999999999999999998 7 9999999987765 332 2332 1111 2234455465 4578999
Q ss_pred EEEEccchhcHH----------------HHHHHhhhcCCCCCeEEEeccCCccc
Q 012596 202 YCLHAMPVQFSS----------------SFLEGISDYVDPGLPFISLSKGLELN 239 (460)
Q Consensus 202 iVilaVp~~~~~----------------~vl~~i~~~l~~~~iIV~~~~Gi~~~ 239 (460)
+||++++..... ++++.+.++ .++++||+++||++..
T Consensus 78 ~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~~ 130 (319)
T 1lld_A 78 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDIA 130 (319)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHH
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHHH
Confidence 999999754332 677778775 6788999999998764
No 124
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.96 E-value=2.2e-09 Score=106.28 Aligned_cols=104 Identities=14% Similarity=0.104 Sum_probs=76.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-c-CCCccCCCCCCCCceEE-eCCHHhhcCCCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-H-CNCRYFPEQKLPENVIA-TTDAKTALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g-~~~~~~~~~~l~~~i~a-~~~~~ea~~~aDiV 203 (460)
||||+|||+|.||+++|..|+++|..++|++||+++++++.+... + .. .+ ++..+.+ ++++ +++++||+|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~-~~-----~~~~~~~~~~d~-~~~~~aDvV 73 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM-AN-----LEAHGNIVINDW-AALADADVV 73 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG-GG-----SSSCCEEEESCG-GGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhh-hh-----cCCCeEEEeCCH-HHhCCCCEE
Confidence 479999999999999999999987435899999999887766532 1 10 01 1112333 4677 678999999
Q ss_pred EEccchhc--------------------HHHHHHHhhhcCCCCCeEEEeccCCcc
Q 012596 204 LHAMPVQF--------------------SSSFLEGISDYVDPGLPFISLSKGLEL 238 (460)
Q Consensus 204 ilaVp~~~--------------------~~~vl~~i~~~l~~~~iIV~~~~Gi~~ 238 (460)
|+++|... +.++++.+.++. +++++|.++|+++.
T Consensus 74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDV 127 (309)
T ss_dssp EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHH
T ss_pred EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHH
Confidence 99999755 367777787765 57788889997754
No 125
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.95 E-value=2.2e-10 Score=116.17 Aligned_cols=129 Identities=12% Similarity=0.131 Sum_probs=96.4
Q ss_pred CCceeecCCCCCCCCCcccccccccc-ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHHHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR-TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMA 143 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~~A 143 (460)
+.++.|+|.|. |...++||+..... ...|+ . +.++ ..++|||||+|.||..+|
T Consensus 82 ~~gI~v~n~pg-~~~~~VAE~~l~~lL~l~r~-------~----------------g~~l--~gktvGIIGlG~IG~~vA 135 (381)
T 3oet_A 82 QAGIGFSAAPG-CNAIAVVEYVFSALLMLAER-------D----------------GFSL--RDRTIGIVGVGNVGSRLQ 135 (381)
T ss_dssp HTTCEEECCTT-TTHHHHHHHHHHHHHHHHHH-------T----------------TCCG--GGCEEEEECCSHHHHHHH
T ss_pred hCCEEEEECCC-cCcchhHHHHHHHHHHHHHh-------c----------------CCcc--CCCEEEEEeECHHHHHHH
Confidence 46899999999 99999999988754 22111 0 1123 357999999999999999
Q ss_pred HHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchh-c----HHHHH-H
Q 012596 144 AHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-F----SSSFL-E 217 (460)
Q Consensus 144 ~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~----~~~vl-~ 217 (460)
.+|...| ++|.+||+..+... .+ ....++++++++||+|++++|.+ . +..++ .
T Consensus 136 ~~l~a~G--~~V~~~d~~~~~~~----~~---------------~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~ 194 (381)
T 3oet_A 136 TRLEALG--IRTLLCDPPRAARG----DE---------------GDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADE 194 (381)
T ss_dssp HHHHHTT--CEEEEECHHHHHTT----CC---------------SCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCH
T ss_pred HHHHHCC--CEEEEECCChHHhc----cC---------------cccCCHHHHHhhCCEEEEcCcCCccccccchhhcCH
Confidence 9999888 99999998543210 11 01247889999999999999954 3 55554 3
Q ss_pred HhhhcCCCCCeEEEeccCCccch
Q 012596 218 GISDYVDPGLPFISLSKGLELNT 240 (460)
Q Consensus 218 ~i~~~l~~~~iIV~~~~Gi~~~~ 240 (460)
+....+++++++|+++.|-..++
T Consensus 195 ~~l~~mk~gailIN~aRG~vvde 217 (381)
T 3oet_A 195 TLIRRLKPGAILINACRGPVVDN 217 (381)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCH
T ss_pred HHHhcCCCCcEEEECCCCcccCH
Confidence 45677899999999999876654
No 126
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.91 E-value=6.1e-10 Score=113.12 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=99.3
Q ss_pred CCceeecCCCCCCCCCcccccccccc-ccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHHHHH
Q 012596 65 NDNTIITPYPDDPDPEPVSAVSSEIR-TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMA 143 (460)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~~A 143 (460)
+.++.|+|.|. +...++||+..... ...|+ |. .++ ..++|||||+|+||..+|
T Consensus 79 ~~gI~v~n~pg-~~~~~vAE~~l~~lL~l~r~---------~~--------------~~l--~g~tvGIIGlG~IG~~vA 132 (380)
T 2o4c_A 79 EAGIAWSSAPG-CNARGVVDYVLGCLLAMAEV---------RG--------------ADL--AERTYGVVGAGQVGGRLV 132 (380)
T ss_dssp HHTCEEECCTT-TTHHHHHHHHHHHHHHHHHH---------HT--------------CCG--GGCEEEEECCSHHHHHHH
T ss_pred hCCCEEEeCCC-cChHHHHHHHHHHHHHHHhh---------hh--------------ccc--CCCEEEEEeCCHHHHHHH
Confidence 35789999998 99999999987744 22211 21 123 367999999999999999
Q ss_pred HHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchhc-----HHHHH-H
Q 012596 144 AHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-----SSSFL-E 217 (460)
Q Consensus 144 ~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~~-----~~~vl-~ 217 (460)
.+|...| ++|++||++.+.. ..+. . ..++++++++||+|++++|.+. +..++ +
T Consensus 133 ~~l~~~G--~~V~~~d~~~~~~----~~g~--------------~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~ 191 (380)
T 2o4c_A 133 EVLRGLG--WKVLVCDPPRQAR----EPDG--------------E-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLDE 191 (380)
T ss_dssp HHHHHTT--CEEEEECHHHHHH----STTS--------------C-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCH
T ss_pred HHHHHCC--CEEEEEcCChhhh----ccCc--------------c-cCCHHHHHHhCCEEEEeccCccccccchhhhcCH
Confidence 9999888 9999999865422 1111 0 1378888899999999999643 55555 4
Q ss_pred HhhhcCCCCCeEEEeccCCccchhhhHHHHHH
Q 012596 218 GISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (460)
Q Consensus 218 ~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~ 249 (460)
+..+.+++++++|++++|-..++ ..+.+.+.
T Consensus 192 ~~l~~mk~gailIN~sRG~vvd~-~aL~~aL~ 222 (380)
T 2o4c_A 192 PRLAALRPGTWLVNASRGAVVDN-QALRRLLE 222 (380)
T ss_dssp HHHHTSCTTEEEEECSCGGGBCH-HHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCcccCH-HHHHHHHH
Confidence 56677899999999998865543 23334443
No 127
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.87 E-value=8.1e-09 Score=102.54 Aligned_cols=106 Identities=23% Similarity=0.318 Sum_probs=77.3
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCC
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGA 200 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~a 200 (460)
|+++|||+|||+|.||+++|..|+.+| + +|++||+++++++..... ... .+ ...+..+..+++. +++++|
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g--~~~V~l~D~~~~~~~~~~~~l~~~~-~~---~~~~~~i~~t~d~-~a~~~a 73 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDN--LADVVLFDIAEGIPQGKALDITHSM-VM---FGSTSKVIGTDDY-ADISGS 73 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSSSHHHHHHHHHHHHH-HH---HTCCCCEEEESCG-GGGTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC--CceEEEEeCCchHHHHHHHHHHhhh-hh---cCCCcEEEECCCH-HHhCCC
Confidence 445689999999999999999999999 7 899999998766653110 000 00 0112346676787 678999
Q ss_pred cEEEEcc--------------ch--hcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 201 DYCLHAM--------------PV--QFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 201 DiVilaV--------------p~--~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
|+||+++ +. ....+++++|.++. ++++++..+|+..
T Consensus 74 DiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~~ 125 (317)
T 2ewd_A 74 DVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPLD 125 (317)
T ss_dssp SEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHH
T ss_pred CEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChHH
Confidence 9999999 32 23577888888875 5889999998554
No 128
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.78 E-value=1.6e-08 Score=101.21 Aligned_cols=103 Identities=21% Similarity=0.228 Sum_probs=75.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHh--hcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINE--KHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~--~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
.|||+|||+|.||+++|..|+..| + +|++||+++++++.... .+.. .++ ..+.++..++|+++++++||+|
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g--~~~V~L~D~~~~~~~~~~~~l~~~~-~~~---~~~~~i~~t~d~~ea~~~aDiV 82 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRE--LADVVLYDVVKGMPEGKALDLSHVT-SVV---DTNVSVRAEYSYEAALTGADCV 82 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSSSHHHHHHHHHHHHH-HHT---TCCCCEEEECSHHHHHTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECChhHHHHHHHHHHhhh-hcc---CCCCEEEEeCCHHHHhCCCCEE
Confidence 579999999999999999999998 6 89999999877665221 1110 111 1244677888998789999999
Q ss_pred EEcc--chh--c-----------------HHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 204 LHAM--PVQ--F-----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 204 ilaV--p~~--~-----------------~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|+++ |.. . ..++++.|.++. ++.+++..+|-.
T Consensus 83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~ 135 (331)
T 1pzg_A 83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPL 135 (331)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCch
Confidence 9998 521 1 456677777775 677887777743
No 129
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.77 E-value=1.4e-08 Score=100.94 Aligned_cols=100 Identities=19% Similarity=0.252 Sum_probs=73.6
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhh---cCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEK---HCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~--~V~v~~r~~~~~~~l~~~---g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
|||+|||+|.||+++|..|+.+| + +|++||+++++++.+... +.. +. .+..+.. ++. +++++||+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g--~~~~V~l~D~~~~~~~~~~~~l~~~~~--~~----~~~~i~~-~d~-~~~~~aDv 70 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG--FAREMVLIDVDKKRAEGDALDLIHGTP--FT----RRANIYA-GDY-ADLKGSDV 70 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--CCSEEEEECSSHHHHHHHHHHHHHHGG--GS----CCCEEEE-CCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCeEEEEeCChHHHHHHHHHHHhhhh--hc----CCcEEEe-CCH-HHhCCCCE
Confidence 68999999999999999999998 7 999999998877765421 110 11 1123444 354 56799999
Q ss_pred EEEccchhc----------------HHHHHHHhhhcCCCCCeEEEeccCCcc
Q 012596 203 CLHAMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGLEL 238 (460)
Q Consensus 203 VilaVp~~~----------------~~~vl~~i~~~l~~~~iIV~~~~Gi~~ 238 (460)
||+++|... +.++++.|.++. +++++|.++|+++.
T Consensus 71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDV 121 (319)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHH
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHH
Confidence 999999633 356677777774 67788888887654
No 130
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.77 E-value=1.6e-07 Score=103.16 Aligned_cols=171 Identities=15% Similarity=0.168 Sum_probs=112.5
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhc-------C-CCccCCCCCCCCceEEeCCHHhhc
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH-------C-NCRYFPEQKLPENVIATTDAKTAL 197 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g-------~-~~~~~~~~~l~~~i~a~~~~~ea~ 197 (460)
...||+|||+|.||..+|..++.+| ++|+++|++++.+++..+.- . .............+..+++.++ +
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l 391 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE-L 391 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGG-G
T ss_pred cccEEEEEcccHHHHHHHHHHHhCC--CchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHH-H
Confidence 3579999999999999999999999 99999999987654322110 0 0000011122235677778765 7
Q ss_pred CCCcEEEEccchh--cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCC-EEEEECcccHHHHhcc
Q 012596 198 LGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQP-FIALSGPSFALELMNK 274 (460)
Q Consensus 198 ~~aDiVilaVp~~--~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~-~~v~~gP~~a~e~~~g 274 (460)
++||+||-+|+.. .-.+++.++.+++++++++-+-+.++.... +.+....+... ......|....
T Consensus 392 ~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~-------ia~~~~~p~r~ig~HFfnP~~~m----- 459 (742)
T 3zwc_A 392 STVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDD-------IASSTDRPQLVIGTHFFSPAHVM----- 459 (742)
T ss_dssp GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHH-------HHTTSSCGGGEEEEECCSSTTTC-----
T ss_pred hhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHH-------HHhhcCCccccccccccCCCCCC-----
Confidence 8999999999964 346789999999999999988887777642 23322221110 11223343221
Q ss_pred CCeEEEEcc-CCHHHHHHHHHHHhcCCceEEEcCChHH
Q 012596 275 LPTAMVVAS-KDRKLANAVQQLLASKHLRISTSSDVTG 311 (460)
Q Consensus 275 ~~~~i~i~~-~d~~~~~~l~~lL~~~g~~v~~~~Di~g 311 (460)
...-++-+. .+++.++.+.++....|...+...|..|
T Consensus 460 ~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~vkd~pG 497 (742)
T 3zwc_A 460 RLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYG 497 (742)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEECCCSTT
T ss_pred ceEEEecCCCCCHHHHHHHHHHHHHhCCCCcccCCCCC
Confidence 111222222 4678899999999999988877777554
No 131
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.73 E-value=1.1e-07 Score=81.49 Aligned_cols=97 Identities=10% Similarity=0.138 Sum_probs=67.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCH---H-hhcCCCc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDA---K-TALLGAD 201 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~---~-ea~~~aD 201 (460)
.|+|+|+|+|.+|..++..|.+.| ++|++++++++.++.+.+. +... +..+ ..+. . ..++++|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~~~~~~~~~~~~~~~~-~~~d---------~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDIDKDICKKASAEIDALV-INGD---------CTKIKTLEDAGIEDAD 71 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCSSEE-EESC---------TTSHHHHHHTTTTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHhcCcEE-EEcC---------CCCHHHHHHcCcccCC
Confidence 479999999999999999999998 8999999999888877654 3210 0000 0122 1 1256899
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+||+++|.......+..+.+.+.++.+++ .+++.
T Consensus 72 ~vi~~~~~~~~~~~~~~~~~~~~~~~ii~-~~~~~ 105 (140)
T 1lss_A 72 MYIAVTGKEEVNLMSSLLAKSYGINKTIA-RISEI 105 (140)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTCCCEEE-ECSST
T ss_pred EEEEeeCCchHHHHHHHHHHHcCCCEEEE-EecCH
Confidence 99999998766555555555566665544 45443
No 132
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.72 E-value=2.8e-08 Score=103.81 Aligned_cols=80 Identities=16% Similarity=0.227 Sum_probs=60.1
Q ss_pred CCCeEEEECcchH--HHHHHHHHHhc----CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC
Q 012596 126 RTNKVVVLGGGSF--GTAMAAHVANK----KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG 199 (460)
Q Consensus 126 ~~~kI~IIGaG~m--G~~~A~~La~~----G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~ 199 (460)
++|||+|||+|.| |.++|..|++. | ++|++||+++++++.+.... ..+++....+.++.+++|..+++++
T Consensus 2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~--~eV~L~Di~~e~l~~~~~~~--~~~l~~~~~~~~I~~ttD~~eal~d 77 (480)
T 1obb_A 2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSG--STVTLMDIDEERLDAILTIA--KKYVEEVGADLKFEKTMNLDDVIID 77 (480)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTT--CEEEEECSCHHHHHHHHHHH--HHHHHHTTCCCEEEEESCHHHHHTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCcCCC--CEEEEEeCCHHHHHHHHHHH--HHHhccCCCCcEEEEECCHHHHhCC
Confidence 4689999999996 56667788754 5 89999999998877654432 1122223345678888899888999
Q ss_pred CcEEEEccch
Q 012596 200 ADYCLHAMPV 209 (460)
Q Consensus 200 aDiVilaVp~ 209 (460)
||+||++++.
T Consensus 78 AD~VIiaagv 87 (480)
T 1obb_A 78 ADFVINTAMV 87 (480)
T ss_dssp CSEEEECCCT
T ss_pred CCEEEECCCc
Confidence 9999999964
No 133
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.71 E-value=3.4e-08 Score=98.64 Aligned_cols=102 Identities=24% Similarity=0.414 Sum_probs=73.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHh--hcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINE--KHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~--~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
+|||+|||+|.||+++|..|+.+| + +|++||+++++++.... .+.. .+. ..+..+..++|. +++++||+|
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g--~~~V~L~Di~~~~l~~~~~~l~~~~-~~~---~~~~~i~~t~d~-~al~~aD~V 86 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKD--LGDVYMFDIIEGVPQGKALDLNHCM-ALI---GSPAKIFGENNY-EYLQNSDVV 86 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSTTHHHHHHHHHHHHH-HHH---TCCCCEEEESCG-GGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHhHh-hcc---CCCCEEEECCCH-HHHCCCCEE
Confidence 479999999999999999999998 6 89999999887664221 1100 000 113457777888 678999999
Q ss_pred EEcc--ch--------------hcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 204 LHAM--PV--------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 204 ilaV--p~--------------~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|+++ |. ....++++++.++. ++.+++..+|-+
T Consensus 87 I~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~ 134 (328)
T 2hjr_A 87 IITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPL 134 (328)
T ss_dssp EECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCch
Confidence 9998 42 12456667777776 677877777743
No 134
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.70 E-value=1.7e-08 Score=105.49 Aligned_cols=119 Identities=17% Similarity=0.224 Sum_probs=82.9
Q ss_pred CCCeEEEECcchH-HHHHHHHHHhc--CC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 126 RTNKVVVLGGGSF-GTAMAAHVANK--KS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 126 ~~~kI~IIGaG~m-G~~~A~~La~~--G~-~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
+.|||+|||+|.+ |.++|..|+.. +. .++|.+||+++++++.+..... .+++....+.++.+++|..+++++||
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~--~~l~~~~~~~~I~~t~D~~eal~~AD 104 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACD--VFIREKAPDIEFAATTDPEEAFTDVD 104 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHH--HHHHHHCTTSEEEEESCHHHHHSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHH--HHhccCCCCCEEEEECCHHHHHcCCC
Confidence 3469999999999 66688888877 33 3789999999988776543221 22223344667888889988899999
Q ss_pred EEEEccchhc------------------------------------HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHH
Q 012596 202 YCLHAMPVQF------------------------------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMS 245 (460)
Q Consensus 202 iVilaVp~~~------------------------------------~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~ 245 (460)
+||++++... +.++++.|.++. |++++|..+|-++ .+.
T Consensus 105 ~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~~TNPvd-----i~T 178 (472)
T 1u8x_X 105 FVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAA-----IVA 178 (472)
T ss_dssp EEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSCHH-----HHH
T ss_pred EEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHH-----HHH
Confidence 9999998732 334455566654 6788888888543 233
Q ss_pred HHHHHHh
Q 012596 246 QIIPQAL 252 (460)
Q Consensus 246 e~l~~~l 252 (460)
+.+.+..
T Consensus 179 ~~~~k~~ 185 (472)
T 1u8x_X 179 EATRRLR 185 (472)
T ss_dssp HHHHHHS
T ss_pred HHHHHhC
Confidence 4554443
No 135
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.70 E-value=3.2e-08 Score=98.04 Aligned_cols=104 Identities=16% Similarity=0.152 Sum_probs=73.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
|||+|||+|.||+++|..|+.++.+++|++||+++++++.+... +....+ ..+..+..+++.++ +++||+||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~----~~~~~i~~t~d~~~-l~~aDvVii 75 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVG----LFDTKVTGSNDYAD-TANSDIVII 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHH----TCCCEEEEESCGGG-GTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcc----cCCcEEEECCCHHH-HCCCCEEEE
Confidence 69999999999999999999863338999999998877655321 110000 01234667778876 899999999
Q ss_pred ccchhc----------------HHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 206 AMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 206 aVp~~~----------------~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
++|... +.++.+.+.++. ++..++.++|.++
T Consensus 76 av~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~~ 122 (310)
T 1guz_A 76 TAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPLD 122 (310)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSHH
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcCchH
Confidence 997421 244556666664 6777777887554
No 136
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.69 E-value=6.5e-08 Score=95.51 Aligned_cols=100 Identities=18% Similarity=0.180 Sum_probs=69.6
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~--~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
|||+|||+|.||+++|..|+.+| + +|++||+++++++..... ... .+. .+..+.. ++. +++++||+|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g--~~~eV~L~D~~~~~~~~~~~~l~~~~-~~~----~~~~i~~-~~~-~a~~~aDvV 71 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG--SCSELVLVDRDEDRAQAEAEDIAHAA-PVS----HGTRVWH-GGH-SELADAQVV 71 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSSHHHHHHHHHHHTTSC-CTT----SCCEEEE-ECG-GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCCHHHHHHHHHhhhhhh-hhc----CCeEEEE-CCH-HHhCCCCEE
Confidence 69999999999999999999998 6 999999998766543221 111 111 1122333 454 568999999
Q ss_pred EEccchhc----------------HHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 204 LHAMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 204 ilaVp~~~----------------~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
|++++... +.++++.+.++ .++++++..+|+++
T Consensus 72 Ii~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 72 ILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVD 120 (304)
T ss_dssp EECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHH
T ss_pred EEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchH
Confidence 99995322 36667777777 47888888888765
No 137
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.69 E-value=3.2e-08 Score=98.12 Aligned_cols=96 Identities=16% Similarity=0.237 Sum_probs=73.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~-G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
.++|+|||+|.||..++..|.+. |. .+|++|+|++++++++.+.... .+..+++++++++++|+|++
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~-~~V~v~dr~~~~~~~l~~~~~~-----------~~~~~~~~~e~v~~aDiVi~ 202 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSF-KEVRIWNRTKENAEKFADTVQG-----------EVRVCSSVQEAVAGADVIIT 202 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCC-SEEEEECSSHHHHHHHHHHSSS-----------CCEECSSHHHHHTTCSEEEE
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCC-cEEEEEcCCHHHHHHHHHHhhC-----------CeEEeCCHHHHHhcCCEEEE
Confidence 57999999999999999999886 62 4899999999999888765210 13556788898999999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCCccc
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELN 239 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~ 239 (460)
|+|+. ..++.. +.++++++|++++. ..++
T Consensus 203 atp~~--~~v~~~--~~l~~g~~vi~~g~-~~p~ 231 (312)
T 2i99_A 203 VTLAT--EPILFG--EWVKPGAHINAVGA-SRPD 231 (312)
T ss_dssp CCCCS--SCCBCG--GGSCTTCEEEECCC-CSTT
T ss_pred EeCCC--CcccCH--HHcCCCcEEEeCCC-CCCC
Confidence 99953 223222 56788999988753 3443
No 138
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.68 E-value=5.1e-08 Score=97.11 Aligned_cols=106 Identities=17% Similarity=0.182 Sum_probs=73.8
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCC-CccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCN-CRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~-~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
|+.+|||+|||+|.||..+|..|+..| + +|+++|+++++++.....-.. ..+ ...+..+..++|. +++++||
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g--~~~v~L~Di~~~~l~~~~~~l~~~~~~---~~~~~~i~~t~d~-~al~~aD 74 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKN--LGDVVLFDIVKNMPHGKALDTSHTNVM---AYSNCKVSGSNTY-DDLAGAD 74 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHHHHHHHTHHHH---HTCCCCEEEECCG-GGGTTCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHHHhhhhh---cCCCcEEEECCCH-HHhCCCC
Confidence 445689999999999999999999998 5 899999998766533221000 000 0112356777788 6789999
Q ss_pred EEEEcc--chh-------------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 202 YCLHAM--PVQ-------------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 202 iVilaV--p~~-------------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+||+++ |.. ...++++.|.++. ++.++|..+|-.
T Consensus 75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~ 129 (322)
T 1t2d_A 75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPV 129 (322)
T ss_dssp EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSH
T ss_pred EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCCh
Confidence 999998 421 2455666777776 677877777743
No 139
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.63 E-value=2.9e-08 Score=86.74 Aligned_cols=92 Identities=20% Similarity=0.273 Sum_probs=71.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.++|+|||+|.||..++..|.+.| ++|++|+|++++++.+.+... ..+...++..++++++|+||.|
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g--~~v~v~~r~~~~~~~~a~~~~-----------~~~~~~~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQ--YKVTVAGRNIDHVRAFAEKYE-----------YEYVLINDIDSLIKNNDVIITA 87 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTT--CEEEEEESCHHHHHHHHHHHT-----------CEEEECSCHHHHHHTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEcCCHHHHHHHHHHhC-----------CceEeecCHHHHhcCCCEEEEe
Confidence 589999999999999999999988 789999999998887765421 0123456788888999999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
+|.... ++ -...++++.+++++...
T Consensus 88 t~~~~~--~~--~~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 88 TSSKTP--IV--EERSLMPGKLFIDLGNP 112 (144)
T ss_dssp SCCSSC--SB--CGGGCCTTCEEEECCSS
T ss_pred CCCCCc--Ee--eHHHcCCCCEEEEccCC
Confidence 997631 11 12456778899988653
No 140
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.61 E-value=5.3e-08 Score=94.73 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=71.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.++|+|||+|.||.+++..|.+.| .+|++|+|++++++.+.+.. ++.+.+++.++++++|+||.|
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g--~~V~v~~r~~~~~~~l~~~~-------------g~~~~~~~~~~~~~aDiVi~a 193 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEG--AKVFLWNRTKEKAIKLAQKF-------------PLEVVNSPEEVIDKVQVIVNT 193 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSHHHHHHHTTTS-------------CEEECSCGGGTGGGCSEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHc-------------CCeeehhHHhhhcCCCEEEEe
Confidence 589999999999999999999999 79999999998887775431 134445777778899999999
Q ss_pred cchhcHHHHHHHh-hhcCCCCCeEEEecc
Q 012596 207 MPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (460)
Q Consensus 207 Vp~~~~~~vl~~i-~~~l~~~~iIV~~~~ 234 (460)
+|.....++...+ .+.++++++++++..
T Consensus 194 tp~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 194 TSVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp SSTTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 9976532211112 355778999999875
No 141
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.56 E-value=2.7e-07 Score=90.81 Aligned_cols=93 Identities=22% Similarity=0.271 Sum_probs=72.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
..++|+|||+|.||..+|..|...| .+|++|+|++++.+.+.+.|.. .....+++++++++|+|++
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALG--ANVKVGARSSAHLARITEMGLV------------PFHTDELKEHVKDIDICIN 221 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTCE------------EEEGGGHHHHSTTCSEEEE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHCCCe------------EEchhhHHHHhhCCCEEEE
Confidence 3689999999999999999999888 8999999998776665543321 1112467788899999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
++|...+.. +....++++.++|++..|
T Consensus 222 ~~p~~~i~~---~~~~~mk~g~~lin~a~g 248 (300)
T 2rir_A 222 TIPSMILNQ---TVLSSMTPKTLILDLASR 248 (300)
T ss_dssp CCSSCCBCH---HHHTTSCTTCEEEECSST
T ss_pred CCChhhhCH---HHHHhCCCCCEEEEEeCC
Confidence 999854322 234567889999999875
No 142
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.55 E-value=2.8e-07 Score=90.57 Aligned_cols=103 Identities=11% Similarity=0.161 Sum_probs=70.6
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHH--HHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQS--INEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~--l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
|||+|||+|.||.++|..|+.+|...+|++||+++++++. +.-.+... ++ ..+..+.+++| .+++++||+||+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~-~~---~~~~~i~~t~d-~~a~~~aDiVVi 75 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GI---DKYPKIVGGAD-YSLLKGSEIIVV 75 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHH-TT---TCCCEEEEESC-GGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhh-hc---CCCCEEEEeCC-HHHhCCCCEEEE
Confidence 7999999999999999999999822289999999987652 21111111 11 12345677777 677899999999
Q ss_pred ccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+.... .+.++.+.+.++ .++.+++..+|-+
T Consensus 76 aag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNPv 121 (294)
T 1oju_A 76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNPM 121 (294)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSH
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcc
Confidence 87421 123344556565 5678888888743
No 143
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.54 E-value=9.5e-08 Score=99.27 Aligned_cols=122 Identities=15% Similarity=0.246 Sum_probs=81.9
Q ss_pred hccCCCeEEEECcchH-HHHHHHHHHhc--CC-CCeEEEEeCCH--HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh
Q 012596 123 ILERTNKVVVLGGGSF-GTAMAAHVANK--KS-QLKVYMLMRDP--AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA 196 (460)
Q Consensus 123 ~~~~~~kI~IIGaG~m-G~~~A~~La~~--G~-~~~V~v~~r~~--~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (460)
+|.+.|||+|||+|.+ |.+++..|+.+ +. .++|++||+++ ++++.+.... ..+++....+..+.+++|..++
T Consensus 3 ~m~~~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~--~~~~~~~~~~~~i~~t~D~~ea 80 (450)
T 1s6y_A 3 AMDKRLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALA--KRMVEKAGVPIEIHLTLDRRRA 80 (450)
T ss_dssp ----CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHH--HHHHHHTTCCCEEEEESCHHHH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHH--HHHHhhcCCCcEEEEeCCHHHH
Confidence 4533579999999999 88888888873 32 27899999999 8776644321 1122223345567888898888
Q ss_pred cCCCcEEEEccchhc------------------------------------HHHHHHHhhhcCCCCCeEEEeccCCccch
Q 012596 197 LLGADYCLHAMPVQF------------------------------------SSSFLEGISDYVDPGLPFISLSKGLELNT 240 (460)
Q Consensus 197 ~~~aDiVilaVp~~~------------------------------------~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~ 240 (460)
+++||+||++++... +.++++.|.++. |++++|..+|-++
T Consensus 81 l~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~~tNPvd--- 156 (450)
T 1s6y_A 81 LDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFTNPAG--- 156 (450)
T ss_dssp HTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHH---
T ss_pred hCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHH---
Confidence 999999999998532 334455566654 6889999888553
Q ss_pred hhhHHHHHHHHh
Q 012596 241 LRMMSQIIPQAL 252 (460)
Q Consensus 241 ~~~l~e~l~~~l 252 (460)
.+.+.+.+..
T Consensus 157 --ivT~a~~k~~ 166 (450)
T 1s6y_A 157 --MVTEAVLRYT 166 (450)
T ss_dssp --HHHHHHHHHC
T ss_pred --HHHHHHHHhC
Confidence 3345555544
No 144
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.54 E-value=3.2e-07 Score=89.92 Aligned_cols=93 Identities=22% Similarity=0.278 Sum_probs=70.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
..++|+|||+|.||..+|..|...| .+|++|+|++++.+.+.+.|.. .....+++++++++|+|++
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g~~------------~~~~~~l~~~l~~aDvVi~ 219 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALG--AKVKVGARESDLLARIAEMGME------------PFHISKAAQELRDVDVCIN 219 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTSE------------EEEGGGHHHHTTTCSEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHCCCe------------ecChhhHHHHhcCCCEEEE
Confidence 3589999999999999999999888 8999999998776655543321 1112467788899999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
++|...+.. +....++++.++|++..|
T Consensus 220 ~~p~~~i~~---~~l~~mk~~~~lin~ar~ 246 (293)
T 3d4o_A 220 TIPALVVTA---NVLAEMPSHTFVIDLASK 246 (293)
T ss_dssp CCSSCCBCH---HHHHHSCTTCEEEECSST
T ss_pred CCChHHhCH---HHHHhcCCCCEEEEecCC
Confidence 999754322 233457789999999864
No 145
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.52 E-value=3.8e-07 Score=80.57 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=68.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hhcCCCccCCCCCCCCceEEeCCHHhh-cCCCcEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN-EKHCNCRYFPEQKLPENVIATTDAKTA-LLGADYCL 204 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~-~~g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiVi 204 (460)
.++|.|+|+|.||..++..|.+.| ++|+++++++++++.+. +.|... +..+.. . ...+.++ +.++|+||
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~~~~~~~~~~~g~~~-~~~d~~---~---~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNEYAFHRLNSEFSGFT-VVGDAA---E---FETLKECGMEKADMVF 89 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGGGGSCTTCCSEE-EESCTT---S---HHHHHTTTGGGCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHhcCCCcE-EEecCC---C---HHHHHHcCcccCCEEE
Confidence 589999999999999999999999 89999999988766554 222110 000000 0 0012222 56899999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
++++.......+..+...+.+...++..+++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 90 AFTNDDSTNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp ECSSCHHHHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred EEeCCcHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 999987665555455554445567777776554
No 146
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.51 E-value=4.7e-07 Score=82.04 Aligned_cols=98 Identities=14% Similarity=0.065 Sum_probs=66.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh--cCCCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA--LLGADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~-G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea--~~~aDiV 203 (460)
.++|+|+|+|.||..++..|.+. | ++|+++++++++++.+.+.|....+ .+..- .+.+.++ +.++|+|
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~~~~~~~~~g~~~~~-gd~~~------~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREEAAQQHRSEGRNVIS-GDATD------PDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHHHHHHHHHTTCCEEE-CCTTC------HHHHHTBCSCCCCCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHHHHHHHHHCCCCEEE-cCCCC------HHHHHhccCCCCCCEE
Confidence 57899999999999999999998 9 8999999999998888776542111 00000 0012333 5789999
Q ss_pred EEccchhcHH-HHHHHhhhcCCCCCeEEEecc
Q 012596 204 LHAMPVQFSS-SFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 204 ilaVp~~~~~-~vl~~i~~~l~~~~iIV~~~~ 234 (460)
|++++..... .++.. ...+.++..++..++
T Consensus 110 i~~~~~~~~~~~~~~~-~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 110 LLAMPHHQGNQTALEQ-LQRRNYKGQIAAIAE 140 (183)
T ss_dssp EECCSSHHHHHHHHHH-HHHTTCCSEEEEEES
T ss_pred EEeCCChHHHHHHHHH-HHHHCCCCEEEEEEC
Confidence 9999976543 33333 333445556666554
No 147
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.48 E-value=1.6e-07 Score=97.91 Aligned_cols=134 Identities=11% Similarity=0.037 Sum_probs=89.4
Q ss_pred CceeecCCCCCCCCCccccccccccccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHHHHHHH
Q 012596 66 DNTIITPYPDDPDPEPVSAVSSEIRTRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAH 145 (460)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~~A~~ 145 (460)
.+..++|+|. +.. +++|.... +. ...++..+.+ |.. ..+..+ ..++|+|||+|.||..+|..
T Consensus 214 ~Gilv~p~~~-vn~-sVae~l~r--~~-~~~~~~l~~g-w~r----------~~~~~l--~GktVgIIG~G~IG~~vA~~ 275 (479)
T 1v8b_A 214 QNELLFTAIN-VND-AVTKQKYD--NV-YGCRHSLPDG-LMR----------ATDFLI--SGKIVVICGYGDVGKGCASS 275 (479)
T ss_dssp TTCCCSEEEE-CTT-SHHHHTTH--HH-HHHHHHHHHH-HHH----------HHCCCC--TTSEEEEECCSHHHHHHHHH
T ss_pred cCCEEeccCC-ccH-HHHHHHHh--ch-HhHHHHHhhh-hhh----------cccccc--CCCEEEEEeeCHHHHHHHHH
Confidence 3568899998 666 88883211 11 1112222222 421 111223 46899999999999999999
Q ss_pred HHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchhcHHHHH-HHhhhcCC
Q 012596 146 VANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQFSSSFL-EGISDYVD 224 (460)
Q Consensus 146 La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~~~~~vl-~~i~~~l~ 224 (460)
|...| .+|++|++++.........|. .. .+++++++.+|+|++++....+ + .+....++
T Consensus 276 l~~~G--~~Viv~d~~~~~~~~a~~~g~--------------~~-~~l~ell~~aDiVi~~~~t~~l---I~~~~l~~MK 335 (479)
T 1v8b_A 276 MKGLG--ARVYITEIDPICAIQAVMEGF--------------NV-VTLDEIVDKGDFFITCTGNVDV---IKLEHLLKMK 335 (479)
T ss_dssp HHHHT--CEEEEECSCHHHHHHHHTTTC--------------EE-CCHHHHTTTCSEEEECCSSSSS---BCHHHHTTCC
T ss_pred HHhCc--CEEEEEeCChhhHHHHHHcCC--------------Ee-cCHHHHHhcCCEEEECCChhhh---cCHHHHhhcC
Confidence 99888 899999999876533333331 22 3788999999999999744332 2 23445688
Q ss_pred CCCeEEEeccCCc
Q 012596 225 PGLPFISLSKGLE 237 (460)
Q Consensus 225 ~~~iIV~~~~Gi~ 237 (460)
+++++|++..|-.
T Consensus 336 ~gailiNvgrg~~ 348 (479)
T 1v8b_A 336 NNAVVGNIGHFDD 348 (479)
T ss_dssp TTCEEEECSSTTT
T ss_pred CCcEEEEeCCCCc
Confidence 9999999998744
No 148
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.47 E-value=2.1e-07 Score=97.33 Aligned_cols=135 Identities=13% Similarity=0.020 Sum_probs=89.5
Q ss_pred CceeecCCCCCCCCCccccccccccccCCcccchhhhhhhhhcccceeeeeccccchhccCCCeEEEECcchHHHHHHHH
Q 012596 66 DNTIITPYPDDPDPEPVSAVSSEIRTRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAH 145 (460)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~~A~~ 145 (460)
.++.++|+|. +.. +++|........ .+...|+. |.+ ..+.++ ..++|+|||+|.||..+|..
T Consensus 234 ~Gilv~n~~~-vn~-sVae~l~r~~~~-------~~~~l~~g---w~~----~~g~~L--~GktVgIIG~G~IG~~vA~~ 295 (494)
T 3d64_A 234 DGRLPFPAFN-VND-SVTKSKFDNLYG-------CRESLVDG---IKR----ATDVMI--AGKIAVVAGYGDVGKGCAQS 295 (494)
T ss_dssp TTCCCSCEEE-CTT-SHHHHHHHHHHH-------HHTTHHHH---HHH----HHCCCC--TTCEEEEECCSHHHHHHHHH
T ss_pred CCCEEEECCC-ccH-HHHHHHHhhhHh-------hhhhhhhh---hhh----cccccc--CCCEEEEEccCHHHHHHHHH
Confidence 3568999998 666 898843221100 11222221 321 112223 46899999999999999999
Q ss_pred HHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccchhcHHHHHHHhhhcCCC
Q 012596 146 VANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQFSSSFLEGISDYVDP 225 (460)
Q Consensus 146 La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~~~~~vl~~i~~~l~~ 225 (460)
|...| .+|++|++++.........|. .. .+++++++.+|+|++++....+- -.+....+++
T Consensus 296 l~~~G--~~V~v~d~~~~~~~~a~~~G~--------------~~-~~l~ell~~aDiVi~~~~t~~lI--~~~~l~~MK~ 356 (494)
T 3d64_A 296 LRGLG--ATVWVTEIDPICALQAAMEGY--------------RV-VTMEYAADKADIFVTATGNYHVI--NHDHMKAMRH 356 (494)
T ss_dssp HHTTT--CEEEEECSCHHHHHHHHTTTC--------------EE-CCHHHHTTTCSEEEECSSSSCSB--CHHHHHHCCT
T ss_pred HHHCC--CEEEEEeCChHhHHHHHHcCC--------------Ee-CCHHHHHhcCCEEEECCCccccc--CHHHHhhCCC
Confidence 99777 999999999875433223231 22 37889999999999998543321 1234566788
Q ss_pred CCeEEEeccCCc
Q 012596 226 GLPFISLSKGLE 237 (460)
Q Consensus 226 ~~iIV~~~~Gi~ 237 (460)
+++||++..|-.
T Consensus 357 gAilINvgrg~v 368 (494)
T 3d64_A 357 NAIVCNIGHFDS 368 (494)
T ss_dssp TEEEEECSSSSC
T ss_pred CcEEEEcCCCcc
Confidence 999999998744
No 149
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.46 E-value=1.1e-06 Score=87.76 Aligned_cols=83 Identities=16% Similarity=0.211 Sum_probs=64.2
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (460)
|++++||+|||+|.||..++..|.+.. +.+|+ ++++++++++.+.+.. ++...+|.+++++ ++
T Consensus 1 M~~~~rvgiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~-------------g~~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 1 MSLTLRIALFGAGRIGHVHAANIAANP-DLELVVIADPFIEGAQRLAEAN-------------GAEAVASPDEVFARDDI 66 (344)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHCT-TEEEEEEECSSHHHHHHHHHTT-------------TCEEESSHHHHTTCSCC
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHc-------------CCceeCCHHHHhcCCCC
Confidence 445689999999999999999998863 26766 8999999888776641 1356678999887 79
Q ss_pred cEEEEccchhcHHHHHHHhh
Q 012596 201 DYCLHAMPVQFSSSFLEGIS 220 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~ 220 (460)
|+|++|+|.....+++....
T Consensus 67 D~V~i~tp~~~h~~~~~~al 86 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAV 86 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHH
T ss_pred CEEEEeCCchhhHHHHHHHH
Confidence 99999999887666555443
No 150
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.46 E-value=1e-06 Score=76.19 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=63.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH---Hhh-cCCCcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---KTA-LLGADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~---~ea-~~~aDi 202 (460)
+++|.|+|+|.+|..++..|.+.| ++|++++++++.++.+.+.+....+ .+. ++. .++ +.++|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~~~~~~~~~~~~~~~~~-gd~---------~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG--KKVLAVDKSKEKIELLEDEGFDAVI-ADP---------TDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHTTCEEEE-CCT---------TCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHCCCcEEE-CCC---------CCHHHHHhCCcccCCE
Confidence 578999999999999999999999 9999999999999888776532111 010 122 121 468999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
||+++++......+-...+.+.. ..++...
T Consensus 74 vi~~~~~~~~n~~~~~~a~~~~~-~~iia~~ 103 (141)
T 3llv_A 74 VLITGSDDEFNLKILKALRSVSD-VYAIVRV 103 (141)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCC-CCEEEEE
T ss_pred EEEecCCHHHHHHHHHHHHHhCC-ceEEEEE
Confidence 99999966544433333333333 3344433
No 151
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.44 E-value=1.3e-06 Score=75.80 Aligned_cols=95 Identities=11% Similarity=0.284 Sum_probs=66.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH---Hh-hcCCCcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---KT-ALLGADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~---~e-a~~~aDi 202 (460)
..+|.|+|+|.+|..+|..|.+.| ++|+++++++++++.+.+.|....+ .+. ++. .+ .++++|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~~~~~g~~~i~-gd~---------~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRTRVDELRERGVRAVL-GNA---------ANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHTTCEEEE-SCT---------TSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHcCCCEEE-CCC---------CCHHHHHhcCcccCCE
Confidence 468999999999999999999999 9999999999999988876542111 110 122 12 1468999
Q ss_pred EEEccchhcHHH-HHHHhhhcCCCCCeEEEecc
Q 012596 203 CLHAMPVQFSSS-FLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 203 VilaVp~~~~~~-vl~~i~~~l~~~~iIV~~~~ 234 (460)
||++++...... ++..+.. +.++..+|...+
T Consensus 75 vi~~~~~~~~n~~~~~~a~~-~~~~~~iiar~~ 106 (140)
T 3fwz_A 75 LILTIPNGYEAGEIVASARA-KNPDIEIIARAH 106 (140)
T ss_dssp EEECCSCHHHHHHHHHHHHH-HCSSSEEEEEES
T ss_pred EEEECCChHHHHHHHHHHHH-HCCCCeEEEEEC
Confidence 999999765433 4443333 334556665554
No 152
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.44 E-value=4.2e-07 Score=90.43 Aligned_cols=103 Identities=21% Similarity=0.268 Sum_probs=71.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
+++||+|||+|.||.++|..|+..| + +|++||+++++++..... +... +. ..+..+..++|. +++++||+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~--~~~v~L~Di~~~~~~g~~~dl~~~~~-~~---~~~~~v~~t~d~-~a~~~aDi 78 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKE--LGDVVLFDIAEGTPQGKGLDIAESSP-VD---GFDAKFTGANDY-AAIEGADV 78 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHHHHHHHHHHH-HH---TCCCCEEEESSG-GGGTTCSE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCchhHHHHHHHHhchhh-hc---CCCCEEEEeCCH-HHHCCCCE
Confidence 5689999999999999999999998 6 999999998765422111 1000 00 012346667777 67899999
Q ss_pred EEEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 203 CLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 203 VilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
||++.... .+.++.+.+.++. ++.+++..+|-+
T Consensus 79 VIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPv 127 (324)
T 3gvi_A 79 VIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPL 127 (324)
T ss_dssp EEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCc
Confidence 99986421 1344455666664 678888888743
No 153
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.43 E-value=8.1e-07 Score=82.90 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=69.4
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhh-cCCCcEEEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiVil 205 (460)
|||.|+|+|.+|..+|..|.+.| ++|+++++++++++.+.+. +... +..+..-+ ..+.++ ++++|+||+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~l~~~~~~~~-i~gd~~~~------~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK--YGVVIINKDRELCEEFAKKLKATI-IHGDGSHK------EILRDAEVSKNDVVVI 71 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHHSSSEE-EESCTTSH------HHHHHHTCCTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHcCCeE-EEcCCCCH------HHHHhcCcccCCEEEE
Confidence 68999999999999999999999 9999999999998887653 3211 11110000 012232 678999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+++++....++..+...+.+...+|...++.
T Consensus 72 ~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~ 102 (218)
T 3l4b_C 72 LTPRDEVNLFIAQLVMKDFGVKRVVSLVNDP 102 (218)
T ss_dssp CCSCHHHHHHHHHHHHHTSCCCEEEECCCSG
T ss_pred ecCCcHHHHHHHHHHHHHcCCCeEEEEEeCc
Confidence 9998877666655555444455666655533
No 154
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.42 E-value=3e-07 Score=80.18 Aligned_cols=85 Identities=9% Similarity=0.145 Sum_probs=63.8
Q ss_pred CCCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 126 RTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 126 ~~~kI~IIGa----G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
+..+|+|||+ |.||..++.+|.+.| ++|+.++++.+.+ .++.+..+++++.+.+|
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G--~~V~~vnp~~~~i-------------------~G~~~~~s~~el~~~vD 71 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKG--FEVLPVNPNYDEI-------------------EGLKCYRSVRELPKDVD 71 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTT--CEEEEECTTCSEE-------------------TTEECBSSGGGSCTTCC
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCC--CEEEEeCCCCCeE-------------------CCeeecCCHHHhCCCCC
Confidence 5689999999 999999999999999 7766666543111 13455668888878899
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEe
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
++++++|...+.++++++.+ ...+.+++..
T Consensus 72 lvii~vp~~~v~~v~~~~~~-~g~~~i~~~~ 101 (138)
T 1y81_A 72 VIVFVVPPKVGLQVAKEAVE-AGFKKLWFQP 101 (138)
T ss_dssp EEEECSCHHHHHHHHHHHHH-TTCCEEEECT
T ss_pred EEEEEeCHHHHHHHHHHHHH-cCCCEEEEcC
Confidence 99999999889999888766 3444454443
No 155
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.41 E-value=1.1e-06 Score=91.12 Aligned_cols=78 Identities=18% Similarity=0.102 Sum_probs=59.9
Q ss_pred CCCeEEEECcchH--HHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 126 RTNKVVVLGGGSF--GTAMAAHVANKK-SQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~m--G~~~A~~La~~G-~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
+.|||+|||+|.| |..++..|+... ...+|++||++++.++.+...+.. +.. .+.++.+++|.++++++||+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~~~~~~~---l~~--~~~~I~~TtD~~eAl~dADf 78 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNH---SGN--GRWRYEAVSTLKKALSAADI 78 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHTT---STT--SCEEEEEESSHHHHHTTCSE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHHHHHHHH---Hhc--cCCeEEEECCHHHHhcCCCE
Confidence 4589999999995 789999888632 112899999999887766543321 222 45568889999999999999
Q ss_pred EEEccc
Q 012596 203 CLHAMP 208 (460)
Q Consensus 203 VilaVp 208 (460)
||++++
T Consensus 79 VI~air 84 (450)
T 3fef_A 79 VIISIL 84 (450)
T ss_dssp EEECCC
T ss_pred EEeccc
Confidence 999996
No 156
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.40 E-value=7.6e-07 Score=73.85 Aligned_cols=97 Identities=19% Similarity=0.272 Sum_probs=67.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
+|+|+|+|+|.||..++..|.+.| .++|++++|++++.+.+...+...... + +.-.++..++++++|+||.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~~-d------~~~~~~~~~~~~~~d~vi~~ 76 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHDLAALAVLNRMGVATKQV-D------AKDEAGLAKALGGFDAVISA 76 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESCHHHHHHHHTTTCEEEEC-C------TTCHHHHHHHTTTCSEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHhCCCcEEEe-c------CCCHHHHHHHHcCCCEEEEC
Confidence 579999999999999999999987 368999999998888776433211100 0 00012345567899999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
+|......+++...+ .+...++++.
T Consensus 77 ~~~~~~~~~~~~~~~---~g~~~~~~~~ 101 (118)
T 3ic5_A 77 APFFLTPIIAKAAKA---AGAHYFDLTE 101 (118)
T ss_dssp SCGGGHHHHHHHHHH---TTCEEECCCS
T ss_pred CCchhhHHHHHHHHH---hCCCEEEecC
Confidence 997766666555433 3556666553
No 157
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.38 E-value=1.2e-06 Score=86.24 Aligned_cols=93 Identities=10% Similarity=0.130 Sum_probs=67.3
Q ss_pred cCCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 125 ERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
|+++||||||+|.||.. ++..|.+.. +.+++ ++++++++++++.+. |. ...+|.+++++++|
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~~~--------------~~~~~~~~ll~~~D 68 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSE-RFEFVGAFTPNKVKREKICSDYRI--------------MPFDSIESLAKKCD 68 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCS-SSEEEEEECSCHHHHHHHHHHHTC--------------CBCSCHHHHHTTCS
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCC-CeEEEEEECCCHHHHHHHHHHcCC--------------CCcCCHHHHHhcCC
Confidence 45689999999999996 888887643 26776 899999988887764 32 12468889888999
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+|++|+|.....+++....+ .|..++ +-|-+
T Consensus 69 ~V~i~tp~~~h~~~~~~al~---~gk~vl-~EKP~ 99 (308)
T 3uuw_A 69 CIFLHSSTETHYEIIKILLN---LGVHVY-VDKPL 99 (308)
T ss_dssp EEEECCCGGGHHHHHHHHHH---TTCEEE-ECSSS
T ss_pred EEEEeCCcHhHHHHHHHHHH---CCCcEE-EcCCC
Confidence 99999998876666554433 344433 44433
No 158
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.38 E-value=2.4e-06 Score=84.46 Aligned_cols=104 Identities=16% Similarity=0.206 Sum_probs=69.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+|||+|||+|.||..++..|+..| + +|.++|+++++++.....-...... ...+..+..++|. +++++||+||+
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g--~~~v~L~Di~~~~~~g~~~dl~~~~~~--~~~~~~i~~t~d~-~a~~~aD~Vi~ 76 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKE--LGDIVLLDIVEGVPQGKALDLYEASPI--EGFDVRVTGTNNY-ADTANSDVIVV 76 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSSSSHHHHHHHHHHTTHHH--HTCCCCEEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CCeEEEEeCCccHHHHHHHhHHHhHhh--cCCCeEEEECCCH-HHHCCCCEEEE
Confidence 479999999999999999999988 5 8999999887665332210000000 0012346666787 67899999999
Q ss_pred ccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
++... ...++.+.+.++. ++.+++..+|-+
T Consensus 77 a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv 122 (309)
T 1ur5_A 77 TSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPL 122 (309)
T ss_dssp CCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCch
Confidence 97421 1234556666664 677877777743
No 159
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.37 E-value=5.3e-07 Score=86.85 Aligned_cols=88 Identities=22% Similarity=0.255 Sum_probs=68.1
Q ss_pred eEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccc
Q 012596 129 KVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMP 208 (460)
Q Consensus 129 kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp 208 (460)
+|+|||+|.||.+++..|.+.| ++|++|+|+.++++.+.+... .. .++++++ +++|+||+|+|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g--~~v~v~~r~~~~~~~l~~~~~-------------~~-~~~~~~~-~~~Divi~~tp 180 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG--LEVWVWNRTPQRALALAEEFG-------------LR-AVPLEKA-REARLLVNATR 180 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHHT-------------CE-ECCGGGG-GGCSEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhc-------------cc-hhhHhhc-cCCCEEEEccC
Confidence 8999999999999999999998 799999999988877765411 11 2466777 89999999999
Q ss_pred hhcHH---HHHHHhhhcCCCCCeEEEeccC
Q 012596 209 VQFSS---SFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 209 ~~~~~---~vl~~i~~~l~~~~iIV~~~~G 235 (460)
..... .++. .+.++++++++++..+
T Consensus 181 ~~~~~~~~~~l~--~~~l~~g~~viD~~~~ 208 (263)
T 2d5c_A 181 VGLEDPSASPLP--AELFPEEGAAVDLVYR 208 (263)
T ss_dssp TTTTCTTCCSSC--GGGSCSSSEEEESCCS
T ss_pred CCCCCCCCCCCC--HHHcCCCCEEEEeecC
Confidence 76422 2221 4567788999998754
No 160
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.36 E-value=4.6e-07 Score=91.19 Aligned_cols=99 Identities=12% Similarity=0.214 Sum_probs=71.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.++|+|||+|.||..++..|.......+|++|+|++++++++.+.-.. ..+ ..+..+++++++++++|+|++|
T Consensus 129 ~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~---~~g----~~~~~~~~~~eav~~aDiVi~a 201 (350)
T 1x7d_A 129 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE---YSG----LTIRRASSVAEAVKGVDIITTV 201 (350)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT---CTT----CEEEECSSHHHHHTTCSEEEEC
T ss_pred CCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh---ccC----ceEEEeCCHHHHHhcCCEEEEe
Confidence 579999999999999998886421126899999999999888765211 001 1245567899999999999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
+|+.....++. .+.+++|+.|+.+..
T Consensus 202 Tps~~~~pvl~--~~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 202 TADKAYATIIT--PDMLEPGMHLNAVGG 227 (350)
T ss_dssp CCCSSEEEEEC--GGGCCTTCEEEECSC
T ss_pred ccCCCCCceec--HHHcCCCCEEEECCC
Confidence 99763222221 256788988887764
No 161
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.35 E-value=2e-06 Score=84.82 Aligned_cols=96 Identities=17% Similarity=0.244 Sum_probs=68.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHH---HHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAV---CQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~---~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
++||+|||+|.||..+|..|+..|...+|.++|++++. +..+... . ...+..+.|. +++++||+|
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~----------~-~~~i~~t~d~-~~l~~aD~V 81 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIF----------N-LPNVEISKDL-SASAHSKVV 81 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHH----------T-CTTEEEESCG-GGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhh----------c-CCCeEEeCCH-HHHCCCCEE
Confidence 57999999999999999999999822289999998751 1122211 0 1256777788 668999999
Q ss_pred EEcc-------------ch--hcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 204 LHAM-------------PV--QFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 204 ilaV-------------p~--~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
|++. .. ....++++++.++. ++.+++..+|-
T Consensus 82 i~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP 127 (303)
T 2i6t_A 82 IFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQP 127 (303)
T ss_dssp EECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSS
T ss_pred EEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCCh
Confidence 9997 21 12566777777776 67888888883
No 162
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.34 E-value=1.8e-06 Score=86.67 Aligned_cols=81 Identities=15% Similarity=0.265 Sum_probs=62.2
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhc--CC
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTAL--LG 199 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~--~~ 199 (460)
|++++||+|||+|.||..++..|.+.. +.+|+ ++|+++++++.+.+. |. ...+|.++++ .+
T Consensus 2 M~~~~~vgiiG~G~~g~~~~~~l~~~~-~~~lvav~d~~~~~~~~~~~~~g~--------------~~~~~~~~~l~~~~ 66 (354)
T 3db2_A 2 MYNPVGVAAIGLGRWAYVMADAYTKSE-KLKLVTCYSRTEDKREKFGKRYNC--------------AGDATMEALLARED 66 (354)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHTTCS-SEEEEEEECSSHHHHHHHHHHHTC--------------CCCSSHHHHHHCSS
T ss_pred CCCcceEEEEccCHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHcCC--------------CCcCCHHHHhcCCC
Confidence 445689999999999999999998762 26755 889999988877654 32 2246888888 57
Q ss_pred CcEEEEccchhcHHHHHHHh
Q 012596 200 ADYCLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i 219 (460)
+|+|++|+|.....+++...
T Consensus 67 ~D~V~i~tp~~~h~~~~~~a 86 (354)
T 3db2_A 67 VEMVIITVPNDKHAEVIEQC 86 (354)
T ss_dssp CCEEEECSCTTSHHHHHHHH
T ss_pred CCEEEEeCChHHHHHHHHHH
Confidence 99999999987765555443
No 163
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.33 E-value=1.7e-06 Score=85.94 Aligned_cols=102 Identities=11% Similarity=0.108 Sum_probs=64.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+|||+|||+|.+|.+++..|+..|.-.+|.++|.++++++..... .....+. ..+++..+..+++++||+||+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~------~~~~i~~~~~~a~~~aDvVii 80 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFM------GQMSLYAGDYSDVKDCDVIVV 80 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCT------TCEEEC--CGGGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhc------CCeEEEECCHHHhCCCCEEEE
Confidence 589999999999999999999988323899999998654432211 1000111 223333233566899999999
Q ss_pred ccchhc----------------HHHHHHHhhhcCCCCCeEEEeccC
Q 012596 206 AMPVQF----------------SSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 206 aVp~~~----------------~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
+++... +.++.+.+.++ .++.+++..+|-
T Consensus 81 ~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNP 125 (318)
T 1y6j_A 81 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNP 125 (318)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSS
T ss_pred cCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCc
Confidence 987422 35556667776 467777777763
No 164
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.32 E-value=2e-06 Score=81.41 Aligned_cols=82 Identities=21% Similarity=0.283 Sum_probs=62.8
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCcEEEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V-~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVil 205 (460)
|||+|||+|.||..++..|.+.| ++| .+||+++. .+ . .++|+++++ .++|+|++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g--~~lv~v~d~~~~-~~-------------------~--~~~~~~~l~~~~~DvVv~ 56 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNG--FEIAAILDVRGE-HE-------------------K--MVRGIDEFLQREMDVAVE 56 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEEECSSCC-CT-------------------T--EESSHHHHTTSCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhcCC--CEEEEEEecCcc-hh-------------------h--hcCCHHHHhcCCCCEEEE
Confidence 68999999999999999999877 887 68998741 10 0 346888888 68999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|+|.....+++... ++.|..+|+.+.+.
T Consensus 57 ~~~~~~~~~~~~~~---l~~G~~vv~~~~~~ 84 (236)
T 2dc1_A 57 AASQQAVKDYAEKI---LKAGIDLIVLSTGA 84 (236)
T ss_dssp CSCHHHHHHHHHHH---HHTTCEEEESCGGG
T ss_pred CCCHHHHHHHHHHH---HHCCCcEEEECccc
Confidence 99987666655433 44678888876644
No 165
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.32 E-value=1.8e-06 Score=85.84 Aligned_cols=106 Identities=18% Similarity=0.182 Sum_probs=69.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
++|||+|||+|.||.++|..|+..|.. +|+++|+++++++.....-.....+. ..+..+..+++. +++++||+||+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~-~v~l~Di~~~~~~g~a~dL~~~~~~~--~~~~~v~~t~d~-~a~~~aDvVIi 79 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLG-DVVLFDIAQGMPNGKALDLLQTCPIE--GVDFKVRGTNDY-KDLENSDVVIV 79 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTTHHHH--TCCCCEEEESCG-GGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCChHHHHHHHHHHHhhhhhc--CCCcEEEEcCCH-HHHCCCCEEEE
Confidence 568999999999999999999998832 99999999876543221100000000 012245556665 57899999999
Q ss_pred ccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+.... .+.++.+.+.++. ++.+++..+|-+
T Consensus 80 ~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPv 125 (321)
T 3p7m_A 80 TAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPL 125 (321)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred cCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCch
Confidence 86321 1344455666665 677888777643
No 166
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.30 E-value=3.6e-06 Score=84.44 Aligned_cols=81 Identities=14% Similarity=0.185 Sum_probs=63.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (460)
+++||+|||+|.||..++..|.+...+.+++ ++|+++++++++.+.. ++..++|.+++++ ++|+
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~-------------~~~~~~~~~~ll~~~~~D~ 78 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT-------------GARGHASLTDMLAQTDADI 78 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH-------------CCEEESCHHHHHHHCCCSE
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc-------------CCceeCCHHHHhcCCCCCE
Confidence 4679999999999999999999872126755 8899999888776642 1356678988876 7999
Q ss_pred EEEccchhcHHHHHHHh
Q 012596 203 CLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i 219 (460)
|++|+|.....+++...
T Consensus 79 V~i~tp~~~h~~~~~~a 95 (354)
T 3q2i_A 79 VILTTPSGLHPTQSIEC 95 (354)
T ss_dssp EEECSCGGGHHHHHHHH
T ss_pred EEECCCcHHHHHHHHHH
Confidence 99999988766655444
No 167
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.30 E-value=2.9e-06 Score=84.09 Aligned_cols=106 Identities=13% Similarity=0.060 Sum_probs=68.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+++||+|||+|.||.++|..|+..|...+|+++|+++++++.....-.. ..+ .+...+++..+..+++++||+||+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~--~~~--~~~~~~~i~~~~~~al~~aDvVii 80 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH--GKV--FAPKPVDIWHGDYDDCRDADLVVI 80 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH--HTT--SSSSCCEEEECCGGGTTTCSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHH--Hhh--hcCCCeEEEcCcHHHhCCCCEEEE
Confidence 3579999999999999999999887435899999998755432211000 000 111123333344567899999999
Q ss_pred ccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+.+.. ...++++.+.++. ++..++..+|-+
T Consensus 81 a~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNPv 126 (316)
T 1ldn_A 81 CAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPV 126 (316)
T ss_dssp CCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSH
T ss_pred cCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCch
Confidence 97532 1344555666665 567777777743
No 168
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.27 E-value=1.8e-06 Score=82.39 Aligned_cols=127 Identities=15% Similarity=0.205 Sum_probs=79.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
+||||+|+|+|.||..++..+.+.+ ++++ +++++.+. .. ++.+++|+++++ ++|+||
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~--~eLva~~d~~~~~-----~~--------------gv~v~~dl~~l~-~~DVvI 59 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKG--HEIVGVIENTPKA-----TT--------------PYQQYQHIADVK-GADVAI 59 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEECSSCC-------C--------------CSCBCSCTTTCT-TCSEEE
T ss_pred CceEEEEECcCHHHHHHHHHHHhCC--CEEEEEEecCccc-----cC--------------CCceeCCHHHHh-CCCEEE
Confidence 5799999999999999999999987 4655 47776541 11 233456787777 999998
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccC
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK 284 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~~ 284 (460)
-++....+.+.++ ++.+..+|..++|+..+.. +.+.+... ...++..|++..-+.-
T Consensus 60 Dft~p~a~~~~~~-----l~~g~~vVigTTG~s~e~~----~~l~~aa~----~~~v~~a~N~S~Gv~l----------- 115 (243)
T 3qy9_A 60 DFSNPNLLFPLLD-----EDFHLPLVVATTGEKEKLL----NKLDELSQ----NMPVFFSANMSYGVHA----------- 115 (243)
T ss_dssp ECSCHHHHHHHHT-----SCCCCCEEECCCSSHHHHH----HHHHHHTT----TSEEEECSSCCHHHHH-----------
T ss_pred EeCChHHHHHHHH-----HhcCCceEeCCCCCCHHHH----HHHHHHHh----cCCEEEECCccHHHHH-----------
Confidence 5554444433332 5667778888888865432 23333321 1456888887642200
Q ss_pred CHHHHHHHHHHHhc
Q 012596 285 DRKLANAVQQLLAS 298 (460)
Q Consensus 285 d~~~~~~l~~lL~~ 298 (460)
-....+.+.++|..
T Consensus 116 ~~~~~~~aa~~l~~ 129 (243)
T 3qy9_A 116 LTKILAAAVPLLDD 129 (243)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcCC
Confidence 02445666777764
No 169
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.26 E-value=4.5e-06 Score=82.88 Aligned_cols=79 Identities=16% Similarity=0.224 Sum_probs=62.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDiV 203 (460)
++||+|||+|.||..++..|.+.. +.+|+ ++|+++++++.+.+.. ++. .++.+++++ ++|+|
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~-------------~~~-~~~~~~~l~~~~~D~V 67 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNA-DARLVAVADAFPAAAEAIAGAY-------------GCE-VRTIDAIEAAADIDAV 67 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT-TEEEEEEECSSHHHHHHHHHHT-------------TCE-ECCHHHHHHCTTCCEE
T ss_pred ceEEEEECCCHHHHHHHHHHhhCC-CcEEEEEECCCHHHHHHHHHHh-------------CCC-cCCHHHHhcCCCCCEE
Confidence 579999999999999999999853 26766 7999999888877642 123 568888876 79999
Q ss_pred EEccchhcHHHHHHHhh
Q 012596 204 LHAMPVQFSSSFLEGIS 220 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~ 220 (460)
++|+|.....+++....
T Consensus 68 ~i~tp~~~h~~~~~~al 84 (331)
T 4hkt_A 68 VICTPTDTHADLIERFA 84 (331)
T ss_dssp EECSCGGGHHHHHHHHH
T ss_pred EEeCCchhHHHHHHHHH
Confidence 99999887666554443
No 170
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.25 E-value=4.7e-06 Score=82.95 Aligned_cols=102 Identities=14% Similarity=0.170 Sum_probs=68.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHH----HHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQS----INEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~----l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
..|||+|||+|.||.++|..|+..|.-.+|+++|+++++++. +.. + .+ ++ +.++.++++..+++++||
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~-~-~~-~~-----~~~v~i~~~~~~a~~~aD 75 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNH-G-KA-FA-----PQPVKTSYGTYEDCKDAD 75 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHH-T-GG-GS-----SSCCEEEEECGGGGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHh-c-cc-cc-----cCCeEEEeCcHHHhCCCC
Confidence 368999999999999999999998832389999999887665 333 1 11 11 112333333345689999
Q ss_pred EEEEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 202 YCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 202 iVilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+||++.... .+.++.+.+.++ .++.+++..+|-+
T Consensus 76 vVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNPv 125 (326)
T 3pqe_A 76 IVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNPV 125 (326)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred EEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCChH
Confidence 999987421 123344555555 3677888888743
No 171
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.24 E-value=4.3e-06 Score=71.66 Aligned_cols=96 Identities=11% Similarity=0.166 Sum_probs=62.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH---Hhh-cCCCcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---KTA-LLGADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~---~ea-~~~aDi 202 (460)
+++|.|+|+|.+|..++..|.+.| ++|++++++++.++.+.+.+... ...+ ..+. .++ +.++|+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g--~~v~~~d~~~~~~~~~~~~~~~~-~~~d---------~~~~~~l~~~~~~~~d~ 73 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG--HEVLAVDINEEKVNAYASYATHA-VIAN---------ATEENELLSLGIRNFEY 73 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCCEEEESCHHHHHTTTTTCSEE-EECC---------TTCHHHHHTTTGGGCSE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhCCEE-EEeC---------CCCHHHHHhcCCCCCCE
Confidence 467999999999999999999998 89999999988776554433210 0000 0122 222 567999
Q ss_pred EEEccchh-cHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 203 CLHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 203 VilaVp~~-~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
||++++.. .....+......+.+. .+|..+++
T Consensus 74 vi~~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 74 VIVAIGANIQASTLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp EEECCCSCHHHHHHHHHHHHHTTCS-EEEEECCS
T ss_pred EEECCCCchHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence 99999975 4333333333334454 55555543
No 172
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.24 E-value=3.6e-06 Score=83.50 Aligned_cols=105 Identities=13% Similarity=0.119 Sum_probs=69.7
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
|++.|||+|||+|.+|.+++..|+..+.-.+|.++|+++++++..... +.. .+. ..+.+..+..+++++||
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~------~~~~v~~~~~~a~~~aD 74 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ-AFT------APKKIYSGEYSDCKDAD 74 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG-GGS------CCCEEEECCGGGGTTCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH-Hhc------CCeEEEECCHHHhCCCC
Confidence 445689999999999999999999887434899999998776643221 111 111 12333334456789999
Q ss_pred EEEEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 202 YCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 202 iVilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+||++.+.. .+.++.+.+.++ .++..++..+|-+
T Consensus 75 vVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv 124 (318)
T 1ez4_A 75 LVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPV 124 (318)
T ss_dssp EEEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcH
Confidence 999997532 133344555555 4677777777744
No 173
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.23 E-value=2.5e-06 Score=84.56 Aligned_cols=106 Identities=20% Similarity=0.232 Sum_probs=68.5
Q ss_pred cCCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCC--HHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD--PAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~--~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
|+.+||+|||+|.||..+|..|+..| + +|++||++ +++++.....-.....+ ......+..+++. +++++||
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g--~~~v~l~D~~~~~~~~~g~a~dl~~~~~~--~~~~~~i~~t~d~-~a~~~aD 80 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKE--LADVVLVDIPQLENPTKGKALDMLEASPV--QGFDANIIGTSDY-ADTADSD 80 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECCGGGHHHHHHHHHHHHHHHHH--HTCCCCEEEESCG-GGGTTCS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeccchHHHHHHhhhhHHHhhhh--ccCCCEEEEcCCH-HHhCCCC
Confidence 34579999999999999999999998 6 99999999 44443222110000000 0012345666665 4589999
Q ss_pred EEEEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 202 YCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 202 iVilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+||++.... .++++.+.+.++. ++.+++..+|-+
T Consensus 81 vVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvvsNPv 130 (315)
T 3tl2_A 81 VVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVVLTNPV 130 (315)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEECCChH
Confidence 999997321 1344455566654 677888888743
No 174
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.22 E-value=5.3e-06 Score=82.24 Aligned_cols=104 Identities=18% Similarity=0.218 Sum_probs=68.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh--hcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE--KHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~--~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
++|||+|||+|.+|.+++..|+..|.-.+|.++|+++++++.... .+. ..++ ...+.+..+..+++++||+|
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~~~~-----~~~~~v~~~~~~a~~~aDvV 78 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-TPYS-----PTTVRVKAGEYSDCHDADLV 78 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-GGGS-----SSCCEEEECCGGGGTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-hhhc-----CCCeEEEeCCHHHhCCCCEE
Confidence 457999999999999999999988743489999999876553211 111 1111 11223333446678999999
Q ss_pred EEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 204 LHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 204 ilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|++++.. .+.++.+.+.++ .++..++..+|-+
T Consensus 79 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv 126 (317)
T 3d0o_A 79 VICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNPV 126 (317)
T ss_dssp EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCcH
Confidence 9998532 133444556666 5677777777643
No 175
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.21 E-value=6.1e-07 Score=78.87 Aligned_cols=89 Identities=9% Similarity=0.003 Sum_probs=64.2
Q ss_pred hccCCCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 123 ILERTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 123 ~~~~~~kI~IIGa----G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
++.+..+|+|||+ |.||..++.+|.+.| ++|+.+++... |.. + .++.+..+++++.+
T Consensus 9 ll~~p~~IavIGas~~~g~~G~~~~~~L~~~G--~~v~~vnp~~~--------g~~--------i-~G~~~~~sl~el~~ 69 (145)
T 2duw_A 9 ILTSTRTIALVGASDKPDRPSYRVMKYLLDQG--YHVIPVSPKVA--------GKT--------L-LGQQGYATLADVPE 69 (145)
T ss_dssp HHHHCCCEEEESCCSCTTSHHHHHHHHHHHHT--CCEEEECSSST--------TSE--------E-TTEECCSSTTTCSS
T ss_pred HHhCCCEEEEECcCCCCCChHHHHHHHHHHCC--CEEEEeCCccc--------ccc--------c-CCeeccCCHHHcCC
Confidence 3433578999999 899999999999999 78776666531 000 0 13455567778777
Q ss_pred CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEE
Q 012596 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFIS 231 (460)
Q Consensus 199 ~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~ 231 (460)
.+|++++++|+..+.++++++.+ ...+.+++.
T Consensus 70 ~~Dlvii~vp~~~v~~v~~~~~~-~g~~~i~i~ 101 (145)
T 2duw_A 70 KVDMVDVFRNSEAAWGVAQEAIA-IGAKTLWLQ 101 (145)
T ss_dssp CCSEEECCSCSTHHHHHHHHHHH-HTCCEEECC
T ss_pred CCCEEEEEeCHHHHHHHHHHHHH-cCCCEEEEc
Confidence 89999999999889999988766 333445543
No 176
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.20 E-value=4.7e-06 Score=82.93 Aligned_cols=104 Identities=14% Similarity=0.067 Sum_probs=72.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
..+||+|||+|.||..+|..|+..|.-.+|+++|+++++++..... +... + .....+..++|+++ +++||+|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~-~----~~~~~i~~t~d~~~-~~daDiV 93 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL-F----LHTAKIVSGKDYSV-SAGSKLV 93 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG-G----SCCSEEEEESSSCS-CSSCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh-c----ccCCeEEEcCCHHH-hCCCCEE
Confidence 3589999999999999999999988433899999998766543211 1000 1 11234666778876 8999999
Q ss_pred EEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 204 LHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 204 ilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|++.... .+.++.+.+.++ .++.+++..+|-+
T Consensus 94 IitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPv 141 (330)
T 3ldh_A 94 VITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELG 141 (330)
T ss_dssp EECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCcc
Confidence 9985321 244556677777 5788888888743
No 177
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.20 E-value=3.7e-06 Score=86.28 Aligned_cols=92 Identities=11% Similarity=-0.035 Sum_probs=71.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
..++|+|+|+|.+|..+|..|...| .+|+++++++.........|. .. .+++++++.+|+|++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~G--a~Viv~D~~p~~a~~A~~~G~--------------~~-~sL~eal~~ADVVil 272 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFG--ARVVVTEVDPINALQAAMEGY--------------QV-LLVEDVVEEAHIFVT 272 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------EE-CCHHHHTTTCSEEEE
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCChhhhHHHHHhCC--------------ee-cCHHHHHhhCCEEEE
Confidence 4689999999999999999999988 899999999876554444442 22 378999999999998
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+.....+- -.+....++++.+||++.+|-
T Consensus 273 t~gt~~iI--~~e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 273 TTGNDDII--TSEHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp CSSCSCSB--CTTTGGGCCTTEEEEECSSSG
T ss_pred CCCCcCcc--CHHHHhhcCCCcEEEEeCCCC
Confidence 76654321 124556688999999998864
No 178
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.19 E-value=3.7e-06 Score=83.60 Aligned_cols=81 Identities=11% Similarity=-0.041 Sum_probs=61.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (460)
+++||||||+|.||..++..|.+.. +.+|+ ++|+++++++.+.+.... ..+++|.++++. ++|+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~~~D~ 70 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESA-QAEVRGIASRRLENAQKMAKELAI------------PVAYGSYEELCKDETIDI 70 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSS-SEEEEEEBCSSSHHHHHHHHHTTC------------CCCBSSHHHHHHCTTCSE
T ss_pred CeEEEEEECchHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHHHcCC------------CceeCCHHHHhcCCCCCE
Confidence 4679999999999999999999853 26766 789999888877765210 023468888876 7999
Q ss_pred EEEccchhcHHHHHHHh
Q 012596 203 CLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i 219 (460)
|++|+|.....+++...
T Consensus 71 V~i~tp~~~h~~~~~~a 87 (330)
T 3e9m_A 71 IYIPTYNQGHYSAAKLA 87 (330)
T ss_dssp EEECCCGGGHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHH
Confidence 99999988766655443
No 179
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.19 E-value=9e-06 Score=81.42 Aligned_cols=103 Identities=20% Similarity=0.244 Sum_probs=71.9
Q ss_pred ccCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHH----HHhhcCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQS----INEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~----l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
++.++||+|||+ |.+|..+|..++..|...+|+++|+++++++. +... . ++ ...+..+++..++++
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~----~~----~~~i~~t~d~~~al~ 75 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-G----FE----GLNLTFTSDIKEALT 75 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-C----CT----TCCCEEESCHHHHHT
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-c----CC----CCceEEcCCHHHHhC
Confidence 456789999998 99999999999988854589999999876554 3321 1 11 124667788888899
Q ss_pred CCcEEEEccchh----------------cHHHHHHHhhhcCCCCCe-EEEeccCC
Q 012596 199 GADYCLHAMPVQ----------------FSSSFLEGISDYVDPGLP-FISLSKGL 236 (460)
Q Consensus 199 ~aDiVilaVp~~----------------~~~~vl~~i~~~l~~~~i-IV~~~~Gi 236 (460)
+||+||++.-.. .+.++.+.+.++. ++.+ ++..+|-+
T Consensus 76 dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNPv 129 (343)
T 3fi9_A 76 DAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNPA 129 (343)
T ss_dssp TEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSSH
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCch
Confidence 999999986311 1334445566665 5564 77777643
No 180
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.17 E-value=8.5e-06 Score=81.35 Aligned_cols=107 Identities=17% Similarity=0.141 Sum_probs=72.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDiV 203 (460)
++||+|||+|.||..++..|.+.. +.+++ ++|+++++++.+.+.... ....+|.+++++ ++|+|
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~~~D~V 68 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMID-DAILYAISDVREDRLREMKEKLGV------------EKAYKDPHELIEDPNVDAV 68 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGST-TEEEEEEECSCHHHHHHHHHHHTC------------SEEESSHHHHHHCTTCCEE
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHhCC------------CceeCCHHHHhcCCCCCEE
Confidence 479999999999999999998753 26766 789999988877664210 135678888877 79999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccCC--ccchhhhHHHHHHH
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL--ELNTLRMMSQIIPQ 250 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi--~~~~~~~l~e~l~~ 250 (460)
++|+|.....+++....+ .|..++ +-|-+ ..+..+.+.+..++
T Consensus 69 ~i~tp~~~h~~~~~~al~---~gk~v~-~EKP~~~~~~e~~~l~~~a~~ 113 (344)
T 3ezy_A 69 LVCSSTNTHSELVIACAK---AKKHVF-CEKPLSLNLADVDRMIEETKK 113 (344)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCEEE-EESCSCSCHHHHHHHHHHHHH
T ss_pred EEcCCCcchHHHHHHHHh---cCCeEE-EECCCCCCHHHHHHHHHHHHH
Confidence 999998876665544433 344443 44433 33333344444433
No 181
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.16 E-value=2.5e-06 Score=86.36 Aligned_cols=105 Identities=14% Similarity=0.115 Sum_probs=70.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCC--CCCCCCceE---------EeCCHHh
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFP--EQKLPENVI---------ATTDAKT 195 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~--~~~l~~~i~---------a~~~~~e 195 (460)
..||+|||+|.||..+++.+...| .+|++||+++++.+.+.+.|.....++ ........+ ...++++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLG--AKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 479999999999999999999988 899999999988888877554211110 000000000 0124667
Q ss_pred hcCCCcEEEEcc--chhcHHH-HHHHhhhcCCCCCeEEEec
Q 012596 196 ALLGADYCLHAM--PVQFSSS-FLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 196 a~~~aDiVilaV--p~~~~~~-vl~~i~~~l~~~~iIV~~~ 233 (460)
+++++|+||.++ |...... +-++..+.++++.+||+++
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 889999999986 4322111 1245556678899999986
No 182
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.15 E-value=1.1e-05 Score=80.76 Aligned_cols=82 Identities=11% Similarity=0.110 Sum_probs=61.7
Q ss_pred cCCCeEEEECcchHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012596 125 ERTNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~-~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (460)
|+++||||||+|.||. .++..|.+.. +.+|+ ++++++++++++.+.. ++...+|.+++++ +.
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~-------------g~~~~~~~~~ll~~~~~ 90 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEP-LTEVTAIASRRWDRAKRFTERF-------------GGEPVEGYPALLERDDV 90 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCT-TEEEEEEEESSHHHHHHHHHHH-------------CSEEEESHHHHHTCTTC
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCC-CeEEEEEEcCCHHHHHHHHHHc-------------CCCCcCCHHHHhcCCCC
Confidence 4568999999999998 7899998763 26765 8899998888776642 1233468888876 58
Q ss_pred cEEEEccchhcHHHHHHHhh
Q 012596 201 DYCLHAMPVQFSSSFLEGIS 220 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~ 220 (460)
|+|++|+|.....+++....
T Consensus 91 D~V~i~tp~~~h~~~~~~al 110 (350)
T 3rc1_A 91 DAVYVPLPAVLHAEWIDRAL 110 (350)
T ss_dssp SEEEECCCGGGHHHHHHHHH
T ss_pred CEEEECCCcHHHHHHHHHHH
Confidence 99999999887666554443
No 183
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.15 E-value=1.6e-05 Score=79.32 Aligned_cols=81 Identities=14% Similarity=0.108 Sum_probs=61.6
Q ss_pred CCeEEEECcchHHHHHHHHHH-hcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC--CcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVA-NKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--ADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La-~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~--aDi 202 (460)
++||+|||+|.||..++..|. +.. +.+|+ ++++++++++++.+... ....+.+|.++++++ +|+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~-~~~l~av~d~~~~~~~~~~~~~g-----------~~~~~~~~~~~ll~~~~~D~ 69 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLS-GAEIVAVTDVNQEAAQKVVEQYQ-----------LNATVYPNDDSLLADENVDA 69 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCS-SEEEEEEECSSHHHHHHHHHHTT-----------CCCEEESSHHHHHHCTTCCE
T ss_pred eEEEEEECccHHHHHHHHHHHhhCC-CcEEEEEEcCCHHHHHHHHHHhC-----------CCCeeeCCHHHHhcCCCCCE
Confidence 479999999999999999998 432 26766 88999998888776421 013566789988765 899
Q ss_pred EEEccchhcHHHHHHHh
Q 012596 203 CLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i 219 (460)
|++|+|.....+++...
T Consensus 70 V~i~tp~~~h~~~~~~a 86 (344)
T 3mz0_A 70 VLVTSWGPAHESSVLKA 86 (344)
T ss_dssp EEECSCGGGHHHHHHHH
T ss_pred EEECCCchhHHHHHHHH
Confidence 99999988766655444
No 184
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.15 E-value=4.8e-06 Score=82.27 Aligned_cols=102 Identities=15% Similarity=0.178 Sum_probs=68.7
Q ss_pred eEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEccc
Q 012596 129 KVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMP 208 (460)
Q Consensus 129 kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp 208 (460)
||+|||+|.||.+++..|+..|. .+|.++|+++++++.....-.....+ ...+..+..+.|. +++++||+||++..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-~el~L~Di~~~~~~g~~~dl~~~~~~--~~~~~~i~~t~d~-~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-DDLLLIARTPGKPQGEALDLAHAAAE--LGVDIRISGSNSY-EDMRGSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-SCEEEECSSTTHHHHHHHHHHHHHHH--HTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCChhhHHHHHHHHHHhhhh--cCCCeEEEECCCH-HHhCCCCEEEEeCC
Confidence 79999999999999999998884 37999999987665322110000000 0012246666776 57899999999965
Q ss_pred hhc----------------HHHHHHHhhhcCCCCCeEEEeccC
Q 012596 209 VQF----------------SSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 209 ~~~----------------~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
... +.++++.+.++. ++..+|..+|-
T Consensus 77 ~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP 118 (308)
T 2d4a_B 77 IGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTNP 118 (308)
T ss_dssp CCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCc
Confidence 322 556666777765 67777778873
No 185
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.14 E-value=1.7e-05 Score=78.39 Aligned_cols=88 Identities=13% Similarity=0.138 Sum_probs=64.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCcEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCL 204 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVi 204 (460)
|+||+|||+|.||..++..|.+.+ +.+++ ++++++++++.+.+... .....+|.++++ .++|+|+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~-~~~~~~v~d~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~D~V~ 67 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSG-EYQLVAIYSRKLETAATFASRYQ------------NIQLFDQLEVFFKSSFDLVY 67 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-SEEEEEEECSSHHHHHHHGGGSS------------SCEEESCHHHHHTSSCSEEE
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCC-CeEEEEEEeCCHHHHHHHHHHcC------------CCeEeCCHHHHhCCCCCEEE
Confidence 479999999999999999998764 25654 88999988877665311 124567888888 7899999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEE
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFI 230 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV 230 (460)
+|+|.....+++....+ .|..++
T Consensus 68 i~tp~~~h~~~~~~al~---~gk~V~ 90 (325)
T 2ho3_A 68 IASPNSLHFAQAKAALS---AGKHVI 90 (325)
T ss_dssp ECSCGGGHHHHHHHHHH---TTCEEE
T ss_pred EeCChHHHHHHHHHHHH---cCCcEE
Confidence 99998876665554433 355444
No 186
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.13 E-value=9.1e-06 Score=71.31 Aligned_cols=102 Identities=8% Similarity=0.059 Sum_probs=65.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCC-HHHHHHHHhh---cCCCccCCCCCCCCceEEeCCHHhh-cCCC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD-PAVCQSINEK---HCNCRYFPEQKLPENVIATTDAKTA-LLGA 200 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~-~~~~~~l~~~---g~~~~~~~~~~l~~~i~a~~~~~ea-~~~a 200 (460)
..++|.|+|+|.+|..++..|.+.| ++|++++++ +++++.+.+. |.... ..+..- ...+.++ ++++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~~~~~~~~~~~~~~~~~~~i-~gd~~~------~~~l~~a~i~~a 72 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRG--QNVTVISNLPEDDIKQLEQRLGDNADVI-PGDSND------SSVLKKAGIDRC 72 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHCTTCEEE-ESCTTS------HHHHHHHTTTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CCEEEEECCChHHHHHHHHhhcCCCeEE-EcCCCC------HHHHHHcChhhC
Confidence 4578999999999999999999998 999999997 5656555432 21100 000000 0112333 6789
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|+||++++++.....+....+.+.+...++...++.
T Consensus 73 d~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 73 RAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred CEEEEecCChHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 999999998766555544444443445556555433
No 187
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.12 E-value=1e-05 Score=80.52 Aligned_cols=103 Identities=12% Similarity=0.060 Sum_probs=68.5
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
+.|||+|||+|.+|.+++..|+..+.-.+|.++|+++++++..... +.. .+. .++.+..+..+++++||+|
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~------~~~~i~~~~~~a~~~aDvV 80 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL-PFT------SPKKIYSAEYSDAKDADLV 80 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS------CCCEEEECCGGGGGGCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH-Hhc------CCeEEEECCHHHhCCCCEE
Confidence 3589999999999999999999887434899999998776543221 111 111 1233333456678999999
Q ss_pred EEccchhc----------------HHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 204 LHAMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 204 ilaVp~~~----------------~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|++..... +.++.+.+.++. ++..++..+|-+
T Consensus 81 ii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv 128 (326)
T 2zqz_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPV 128 (326)
T ss_dssp EECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSH
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCcH
Confidence 99875321 233444555553 677777777744
No 188
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.09 E-value=1.9e-05 Score=79.43 Aligned_cols=82 Identities=12% Similarity=0.058 Sum_probs=62.1
Q ss_pred CCCeEEEECcchHHHHHHHHHH-hcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVA-NKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La-~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (460)
+++||||||+|.||..++..|. +.. +.+|+ ++|+++++++.+.+. |. .+...+|.+++++ +.
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~-~~~lvav~d~~~~~~~~~a~~~g~------------~~~~~~~~~~ll~~~~~ 88 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVS-GVEVVAVCDIVAGRAQAALDKYAI------------EAKDYNDYHDLINDKDV 88 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCT-TEEEEEEECSSTTHHHHHHHHHTC------------CCEEESSHHHHHHCTTC
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCC-CcEEEEEEeCCHHHHHHHHHHhCC------------CCeeeCCHHHHhcCCCC
Confidence 3579999999999999999998 432 26766 899999888877664 21 1346678988876 58
Q ss_pred cEEEEccchhcHHHHHHHhh
Q 012596 201 DYCLHAMPVQFSSSFLEGIS 220 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~ 220 (460)
|+|++|+|.....+++....
T Consensus 89 D~V~i~tp~~~h~~~~~~al 108 (357)
T 3ec7_A 89 EVVIITASNEAHADVAVAAL 108 (357)
T ss_dssp CEEEECSCGGGHHHHHHHHH
T ss_pred CEEEEcCCcHHHHHHHHHHH
Confidence 99999999887666554443
No 189
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.08 E-value=1.8e-05 Score=78.73 Aligned_cols=103 Identities=12% Similarity=0.069 Sum_probs=69.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
..+||+|||+|.||.++|..|+..|.-.+|+++|+++++++..... +.. .+. .++.++++..+++++||+|
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-~~~------~~~~i~~~~~~a~~~aDiV 80 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-PFT------SPKKIYSAEYSDAKDADLV 80 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS------CCCEEEECCGGGGTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-hhc------CCcEEEECcHHHhcCCCEE
Confidence 3589999999999999999999988423899999998876643321 111 011 1334444445668999999
Q ss_pred EEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 204 LHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 204 ilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|++.... .+.++.+.+.++. ++.+++..+|-+
T Consensus 81 vi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilvvtNPv 128 (326)
T 3vku_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPV 128 (326)
T ss_dssp EECCCCC----------------CHHHHHHHHHTTT-CCSEEEECSSSH
T ss_pred EECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEccCch
Confidence 9986421 1344555566654 577888887743
No 190
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.08 E-value=1.4e-05 Score=78.88 Aligned_cols=101 Identities=22% Similarity=0.217 Sum_probs=67.5
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
|||+|||+|.+|.+++..|+..+.-.+|.++|+++++++..... +.. .+. .+..+.. ++ .+++++||+||+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~-~~~----~~~~v~~-~~-~~a~~~aD~Vii 73 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT-PFA----HPVWVWA-GS-YGDLEGARAVVL 73 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG-GGS----CCCEEEE-CC-GGGGTTEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH-hhc----CCeEEEE-CC-HHHhCCCCEEEE
Confidence 69999999999999999999887546899999998776643221 111 111 1123333 34 567899999999
Q ss_pred ccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+.... .+.++.+.+.++ .++..++..+|-+
T Consensus 74 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv 119 (310)
T 2xxj_A 74 AAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPV 119 (310)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred CCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCch
Confidence 87532 133444555565 4677777777743
No 191
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.07 E-value=4.2e-06 Score=82.84 Aligned_cols=89 Identities=12% Similarity=0.124 Sum_probs=65.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-----cCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-----HCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-----g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
.++|+|||+|.||..++..|.+.....+|++|+|+ +.+++.++ |. .+.+. +++++++++|
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~------------~~~~~-~~~eav~~aD 185 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGV------------PARMA-APADIAAQAD 185 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTS------------CEEEC-CHHHHHHHCS
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCC------------eEEEe-CHHHHHhhCC
Confidence 47899999999999999999874212689999999 44444331 22 24455 8999999999
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
+|++|+|+.. .++. .+.+++|+.|+++..
T Consensus 186 IVi~aT~s~~--pvl~--~~~l~~G~~V~~vGs 214 (313)
T 3hdj_A 186 IVVTATRSTT--PLFA--GQALRAGAFVGAIGS 214 (313)
T ss_dssp EEEECCCCSS--CSSC--GGGCCTTCEEEECCC
T ss_pred EEEEccCCCC--cccC--HHHcCCCcEEEECCC
Confidence 9999999752 1221 356888998888753
No 192
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.07 E-value=1.7e-05 Score=80.86 Aligned_cols=99 Identities=18% Similarity=0.277 Sum_probs=78.3
Q ss_pred cchhccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHH------HHHHHHhhcCCCccCCCCCCCCceEEeCCH
Q 012596 120 KTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA------VCQSINEKHCNCRYFPEQKLPENVIATTDA 193 (460)
Q Consensus 120 ~~~~~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~------~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~ 193 (460)
+.+++ +.+||+|||.|+-|.+-|.+|.++| .+|++--|... ..+...+.|. .+. +.
T Consensus 31 ~~~~l-kgK~IaVIGyGsQG~AqAlNLRDSG--v~V~Vglr~~s~~e~~~S~~~A~~~Gf--------------~v~-~~ 92 (491)
T 3ulk_A 31 GASYL-QGKKVVIVGCGAQGLNQGLNMRDSG--LDISYALRKEAIAEKRASWRKATENGF--------------KVG-TY 92 (491)
T ss_dssp TTGGG-TTSEEEEESCSHHHHHHHHHHHHTT--CEEEEEECHHHHHTTCHHHHHHHHTTC--------------EEE-EH
T ss_pred hhHHH-cCCEEEEeCCChHhHHHHhHHHhcC--CcEEEEeCCCCcccccchHHHHHHCCC--------------Eec-CH
Confidence 34555 4589999999999999999999999 89998777432 2344445553 222 57
Q ss_pred HhhcCCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 194 KTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 194 ~ea~~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
+|+++.+|+|++.+|+..-.++.+.|.+++++|+.+. .+-|+.
T Consensus 93 ~eA~~~ADvV~~L~PD~~q~~vy~~I~p~lk~G~~L~-faHGFn 135 (491)
T 3ulk_A 93 EELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALG-YSHGFN 135 (491)
T ss_dssp HHHGGGCSEEEECSCGGGHHHHHHHHGGGSCTTCEEE-ESSCHH
T ss_pred HHHHHhCCEEEEeCChhhHHHHHHHHHhhCCCCCEEE-ecCccc
Confidence 8899999999999999988889999999999998766 455664
No 193
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.07 E-value=4.5e-06 Score=85.10 Aligned_cols=105 Identities=14% Similarity=0.147 Sum_probs=70.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCC-----CCCCCCce-E-E--------eC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFP-----EQKLPENV-I-A--------TT 191 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~-----~~~l~~~i-~-a--------~~ 191 (460)
..||+|||+|.||..+++.+...| .+|++||+++++.+.+.+.|......+ +..-.... + . ..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLG--AVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 479999999999999999999988 899999999988887776554211100 00000000 0 0 12
Q ss_pred CHHhhcCCCcEEEEcc--chhcHHH-HHHHhhhcCCCCCeEEEec
Q 012596 192 DAKTALLGADYCLHAM--PVQFSSS-FLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 192 ~~~ea~~~aDiVilaV--p~~~~~~-vl~~i~~~l~~~~iIV~~~ 233 (460)
+++++++++|+||.++ |...... +-++..+.++++.+||+++
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 4677789999999986 4322111 1245666788999999986
No 194
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.07 E-value=8.9e-06 Score=80.52 Aligned_cols=105 Identities=20% Similarity=0.239 Sum_probs=65.9
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEcc
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (460)
|||+|||+|.||.++|..|+..|...+|+++|+++++++.....-....++.. .+..+..+++ .+++++||+||++.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~--~~~~v~~~~~-~~a~~~aDvVii~a 77 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHG--FDTRVTGTND-YGPTEDSDVCIITA 77 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHT--CCCEEEEESS-SGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccC--CCcEEEECCC-HHHhCCCCEEEECC
Confidence 79999999999999999999988333899999998765422110000000000 0112333444 45689999999987
Q ss_pred chh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 208 PVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 208 p~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
... .+.++.+.+.++ .++.+++..+|-+
T Consensus 78 g~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPv 121 (314)
T 3nep_X 78 GLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPL 121 (314)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSH
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCch
Confidence 532 123334455555 4677888888743
No 195
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.07 E-value=1.7e-05 Score=79.01 Aligned_cols=106 Identities=13% Similarity=0.174 Sum_probs=71.6
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
.+..+||+|||+|.||..+|..|+..|...+|+++|+++++++..... +... + . ....+..+.|.+ ++++||
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~-~-~---~~~~i~~~~d~~-~~~~aD 89 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSL-F-L---KTPKIVSSKDYS-VTANSK 89 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG-G-C---SCCEEEECSSGG-GGTTEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhh-c-c---CCCeEEEcCCHH-HhCCCC
Confidence 345689999999999999999999988434899999998766543221 1100 1 1 112345566776 489999
Q ss_pred EEEEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 202 YCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 202 iVilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+||++.-.. .+.++.+.+.++ .++.+++..+|-+
T Consensus 90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPv 139 (331)
T 4aj2_A 90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPV 139 (331)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChH
Confidence 999986311 134455566666 5678888888744
No 196
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.06 E-value=8.4e-06 Score=80.98 Aligned_cols=93 Identities=11% Similarity=0.082 Sum_probs=68.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.++|+|||+|.||..++..|.+.....+|.+|+|++++++++.+.... . + ..+. .+++++++ ++|+|++|
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-~---~----~~~~-~~~~~e~v-~aDvVi~a 194 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-R---G----ISAS-VQPAEEAS-RCDVLVTT 194 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-T---T----CCEE-ECCHHHHT-SSSEEEEC
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-c---C----ceEE-ECCHHHHh-CCCEEEEe
Confidence 579999999999999999998732126899999999998888764210 0 0 1244 67888989 99999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
+|+.. .++. ...+++|+.|+++.
T Consensus 195 Tp~~~--pv~~--~~~l~~G~~V~~ig 217 (322)
T 1omo_A 195 TPSRK--PVVK--AEWVEEGTHINAIG 217 (322)
T ss_dssp CCCSS--CCBC--GGGCCTTCEEEECS
T ss_pred eCCCC--ceec--HHHcCCCeEEEECC
Confidence 99753 1111 24677888887763
No 197
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.05 E-value=8.6e-06 Score=82.14 Aligned_cols=82 Identities=18% Similarity=0.257 Sum_probs=57.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+.|||+|||+|.+|..++..|++. ++|++++++.+.++++.+.... ..+. +.-.+++.++++++|+||.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~---~~v~~~~~~~~~~~~~~~~~~~------~~~d--~~d~~~l~~~~~~~DvVi~ 83 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFATP------LKVD--ASNFDKLVEVMKEFELVIG 83 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSEE------EECC--TTCHHHHHHHHTTCSEEEE
T ss_pred CccEEEEECCCHHHHHHHHHHhcC---CCeEEEEcCHHHHHHHhccCCc------EEEe--cCCHHHHHHHHhCCCEEEE
Confidence 468999999999999999999864 7999999999888877543110 0000 0001234566789999999
Q ss_pred ccchhcHHHHHHH
Q 012596 206 AMPVQFSSSFLEG 218 (460)
Q Consensus 206 aVp~~~~~~vl~~ 218 (460)
|+|...-..+++.
T Consensus 84 ~~p~~~~~~v~~~ 96 (365)
T 3abi_A 84 ALPGFLGFKSIKA 96 (365)
T ss_dssp CCCGGGHHHHHHH
T ss_pred ecCCcccchHHHH
Confidence 9998755555443
No 198
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.03 E-value=2.2e-05 Score=78.93 Aligned_cols=93 Identities=15% Similarity=0.162 Sum_probs=65.1
Q ss_pred cCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCc
Q 012596 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (460)
|+++||+|||+|.||...+..|.+.. +.+|+ ++|+++++++...+.| +.+.+|.+++++ +.|
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~a~~~g--------------~~~~~~~~~ll~~~~~D 67 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAAD-NLEVHGVFDILAEKREAAAQKG--------------LKIYESYEAVLADEKVD 67 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTST-TEEEEEEECSSHHHHHHHHTTT--------------CCBCSCHHHHHHCTTCC
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHhcC--------------CceeCCHHHHhcCCCCC
Confidence 34579999999999999999998763 26765 7899988776443332 234568888876 789
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+|++|+|.....+++....+ .|..|+ +-|-+
T Consensus 68 ~V~i~tp~~~h~~~~~~al~---aGkhVl-~EKP~ 98 (359)
T 3e18_A 68 AVLIATPNDSHKELAISALE---AGKHVV-CEKPV 98 (359)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-EESSC
T ss_pred EEEEcCCcHHHHHHHHHHHH---CCCCEE-eeCCC
Confidence 99999998776555544333 354444 44433
No 199
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.03 E-value=1.3e-05 Score=79.02 Aligned_cols=88 Identities=10% Similarity=0.062 Sum_probs=60.7
Q ss_pred cCCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 125 ERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
|+++||+|||+|.||.. ++..|.+.. +.+|+ ++++++++++.+.+. |. ..+++.+++..++|
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~-~~~lvav~d~~~~~~~~~~~~~g~--------------~~~~~~~~l~~~~D 67 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAAS-DWTLQGAWSPTRAKALPICESWRI--------------PYADSLSSLAASCD 67 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCS-SEEEEEEECSSCTTHHHHHHHHTC--------------CBCSSHHHHHTTCS
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCC-CeEEEEEECCCHHHHHHHHHHcCC--------------CccCcHHHhhcCCC
Confidence 34689999999999996 888887642 26766 899998888777654 32 13356666556899
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEE
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFI 230 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV 230 (460)
+|++|+|.....+++....+ .|..++
T Consensus 68 ~V~i~tp~~~h~~~~~~al~---~G~~v~ 93 (319)
T 1tlt_A 68 AVFVHSSTASHFDVVSTLLN---AGVHVC 93 (319)
T ss_dssp EEEECSCTTHHHHHHHHHHH---TTCEEE
T ss_pred EEEEeCCchhHHHHHHHHHH---cCCeEE
Confidence 99999998766555544332 455444
No 200
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.03 E-value=1e-05 Score=84.67 Aligned_cols=91 Identities=14% Similarity=0.039 Sum_probs=70.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
..++|+|+|+|.||..+|..+...| .+|+++++++.+.+...+.|. .. .+++++++++|+||.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~G--a~Viv~d~~~~~~~~A~~~Ga--------------~~-~~l~e~l~~aDvVi~ 335 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQG--ARVSVTEIDPINALQAMMEGF--------------DV-VTVEEAIGDADIVVT 335 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------EE-CCHHHHGGGCSEEEE
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCC--------------EE-ecHHHHHhCCCEEEE
Confidence 5689999999999999999999888 899999999987766665553 11 256778889999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
+++...+-. .+..+.++++.+++++..+
T Consensus 336 atgt~~~i~--~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 336 ATGNKDIIM--LEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp CSSSSCSBC--HHHHHHSCTTCEEEECSSS
T ss_pred CCCCHHHHH--HHHHHhcCCCcEEEEeCCC
Confidence 998655210 1344557889999998764
No 201
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.03 E-value=2.2e-05 Score=78.17 Aligned_cols=88 Identities=16% Similarity=0.202 Sum_probs=63.6
Q ss_pred CCCeEEEECcchHHHHHHHHHH-hcCCCCeE-EEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVA-NKKSQLKV-YMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La-~~G~~~~V-~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (460)
+++||+|||+|.||..++..|. +.. +.+| .++++++++++.+.+. |. ..+.+|.+++++ ++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~-~~~~vav~d~~~~~~~~~a~~~g~-------------~~~~~~~~~~l~~~~~ 72 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQ-GVKLVAACALDSNQLEWAKNELGV-------------ETTYTNYKDMIDTENI 72 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCS-SEEEEEEECSCHHHHHHHHHTTCC-------------SEEESCHHHHHTTSCC
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHHhCC-------------CcccCCHHHHhcCCCC
Confidence 4689999999999999999998 532 2664 5889999888777654 21 135568888776 69
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEE
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFI 230 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV 230 (460)
|+|++|+|.....+++.... +.|..++
T Consensus 73 D~V~i~tp~~~h~~~~~~al---~~G~~v~ 99 (346)
T 3cea_A 73 DAIFIVAPTPFHPEMTIYAM---NAGLNVF 99 (346)
T ss_dssp SEEEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred CEEEEeCChHhHHHHHHHHH---HCCCEEE
Confidence 99999999877655554433 2455444
No 202
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.02 E-value=2.5e-06 Score=81.90 Aligned_cols=91 Identities=11% Similarity=0.110 Sum_probs=66.0
Q ss_pred eEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEcc
Q 012596 129 KVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (460)
Q Consensus 129 kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (460)
+|+|||+|.||.+++..|.+.| . +|++++|+.++++++.+.. +....+++.++++++|+||.++
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G--~~~I~v~nR~~~ka~~la~~~-------------~~~~~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG--VKDIWVVNRTIERAKALDFPV-------------KIFSLDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--CCCEEEEESCHHHHHTCCSSC-------------EEEEGGGHHHHHHTCSEEEECS
T ss_pred eEEEECcHHHHHHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHc-------------ccCCHHHHHhhhcCCCEEEECC
Confidence 8999999999999999999998 6 8999999998777654321 1123346667788999999999
Q ss_pred chhcHHHHHHHh-hhcCCCCCeEEEeccC
Q 012596 208 PVQFSSSFLEGI-SDYVDPGLPFISLSKG 235 (460)
Q Consensus 208 p~~~~~~vl~~i-~~~l~~~~iIV~~~~G 235 (460)
|..-..+. ..+ ...++++++++++.-+
T Consensus 175 p~gm~p~~-~~i~~~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 175 SVGMKGEE-LPVSDDSLKNLSLVYDVIYF 202 (253)
T ss_dssp STTTTSCC-CSCCHHHHTTCSEEEECSSS
T ss_pred CCCCCCCC-CCCCHHHhCcCCEEEEeeCC
Confidence 85311000 011 2235678899999876
No 203
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.02 E-value=3.6e-05 Score=76.14 Aligned_cols=85 Identities=8% Similarity=0.059 Sum_probs=61.9
Q ss_pred CeEEEECcchHHHHH-HHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC--CCcE
Q 012596 128 NKVVVLGGGSFGTAM-AAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~-A~~La~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (460)
+||+|||+|.||..+ +..|.+.+ .+|+ ++++++++++.+.+. |.. .+.+|.+++++ ++|+
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~--~~~vav~d~~~~~~~~~~~~~g~~-------------~~~~~~~~~l~~~~~D~ 65 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATG--GEVVSMMSTSAERGAAYATENGIG-------------KSVTSVEELVGDPDVDA 65 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTT--CEEEEEECSCHHHHHHHHHHTTCS-------------CCBSCHHHHHTCTTCCE
T ss_pred CeEEEEcccHHHHHhhhHHhhcCC--CeEEEEECCCHHHHHHHHHHcCCC-------------cccCCHHHHhcCCCCCE
Confidence 589999999999998 77887755 7765 889999888777664 210 13457888776 5999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEE
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFI 230 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV 230 (460)
|++++|.....+++.... +.|..++
T Consensus 66 V~i~tp~~~h~~~~~~al---~~Gk~v~ 90 (332)
T 2glx_A 66 VYVSTTNELHREQTLAAI---RAGKHVL 90 (332)
T ss_dssp EEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred EEEeCChhHhHHHHHHHH---HCCCeEE
Confidence 999999877666554433 3455444
No 204
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.01 E-value=1.9e-05 Score=79.33 Aligned_cols=98 Identities=12% Similarity=0.164 Sum_probs=66.9
Q ss_pred hccCCCeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--C
Q 012596 123 ILERTNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--G 199 (460)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V-~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~ 199 (460)
.|++++||+|||+|.||..++..|.+.. +.++ .++++++++++.+.+... ++......++.+++++ +
T Consensus 2 ~~~~~~~vgiiG~G~ig~~~~~~l~~~~-~~~lv~v~d~~~~~~~~~a~~~~---------~~~~~~~~~~~~~ll~~~~ 71 (362)
T 1ydw_A 2 ATETQIRIGVMGCADIARKVSRAIHLAP-NATISGVASRSLEKAKAFATANN---------YPESTKIHGSYESLLEDPE 71 (362)
T ss_dssp ----CEEEEEESCCTTHHHHHHHHHHCT-TEEEEEEECSSHHHHHHHHHHTT---------CCTTCEEESSHHHHHHCTT
T ss_pred CCCCceEEEEECchHHHHHHHHHHhhCC-CcEEEEEEcCCHHHHHHHHHHhC---------CCCCCeeeCCHHHHhcCCC
Confidence 3556789999999999999999998753 2565 488999988877766421 0112356678888875 5
Q ss_pred CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
+|+|++|+|.....+++... ++.|..|+ +-|
T Consensus 72 ~D~V~i~tp~~~h~~~~~~a---l~aGk~V~-~EK 102 (362)
T 1ydw_A 72 IDALYVPLPTSLHVEWAIKA---AEKGKHIL-LEK 102 (362)
T ss_dssp CCEEEECCCGGGHHHHHHHH---HTTTCEEE-ECS
T ss_pred CCEEEEcCChHHHHHHHHHH---HHCCCeEE-Eec
Confidence 89999999988766655443 33465544 344
No 205
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.00 E-value=3.4e-05 Score=76.29 Aligned_cols=100 Identities=16% Similarity=0.199 Sum_probs=67.1
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEE---eCCHHhhcCCCcEE
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA---TTDAKTALLGADYC 203 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a---~~~~~ea~~~aDiV 203 (460)
|||+|||+ |.+|..++..|+..|..++|.++|+++.......-.+. ..+..+.. ++|+++++++||+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~--------~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHI--------ETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTS--------SSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhcc--------CcCceEEEecCCCCHHHHhCCCCEE
Confidence 69999998 99999999999987754689999998722221111111 11223555 25788889999999
Q ss_pred EEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 204 LHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 204 ilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|++.... .+.++.+.+.++. ++..+|..+|-+
T Consensus 73 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv 120 (314)
T 1mld_A 73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPV 120 (314)
T ss_dssp EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCH
T ss_pred EECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCc
Confidence 9987421 2445556666665 566777777743
No 206
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.00 E-value=9.9e-06 Score=82.93 Aligned_cols=91 Identities=14% Similarity=0.105 Sum_probs=68.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
..++|+|+|+|.+|..+|..|...| .+|+++++++.........|. .. .+++++++.+|+|++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~G--a~Viv~D~dp~ra~~A~~~G~--------------~v-~~Leeal~~ADIVi~ 281 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMG--SIVYVTEIDPICALQACMDGF--------------RL-VKLNEVIRQVDIVIT 281 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------EE-CCHHHHTTTCSEEEE
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCChhhhHHHHHcCC--------------Ee-ccHHHHHhcCCEEEE
Confidence 4689999999999999999999888 899999999865544434331 12 368899999999999
Q ss_pred ccchhcHHHHHH-HhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQFSSSFLE-GISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~~~~~vl~-~i~~~l~~~~iIV~~~~Gi 236 (460)
|.-... ++. +....++++.++|++..|-
T Consensus 282 atgt~~---lI~~e~l~~MK~gailINvgrg~ 310 (435)
T 3gvp_A 282 CTGNKN---VVTREHLDRMKNSCIVCNMGHSN 310 (435)
T ss_dssp CSSCSC---SBCHHHHHHSCTTEEEEECSSTT
T ss_pred CCCCcc---cCCHHHHHhcCCCcEEEEecCCC
Confidence 733222 221 3445578899999998763
No 207
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.00 E-value=2.4e-05 Score=77.28 Aligned_cols=79 Identities=18% Similarity=0.299 Sum_probs=56.6
Q ss_pred CCeEEEECcchHHH-HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhc-CCCcEE
Q 012596 127 TNKVVVLGGGSFGT-AMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTAL-LGADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~-~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiV 203 (460)
++||+|||+|.||. .++..|.+.. +.+|+++|+++++++++.+. |.. ....+..+.+ .++|+|
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~-~~~l~v~d~~~~~~~~~a~~~g~~-------------~~~~~~~~~l~~~~D~V 67 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWP-DIELVLCTRNPKVLGTLATRYRVS-------------ATCTDYRDVLQYGVDAV 67 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTST-TEEEEEECSCHHHHHHHHHHTTCC-------------CCCSSTTGGGGGCCSEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHcCCC-------------ccccCHHHHhhcCCCEE
Confidence 47999999999998 5898887652 26777999999988877664 321 0011233344 679999
Q ss_pred EEccchhcHHHHHHHh
Q 012596 204 LHAMPVQFSSSFLEGI 219 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i 219 (460)
++|+|.....+++...
T Consensus 68 ~i~tp~~~h~~~~~~a 83 (323)
T 1xea_A 68 MIHAATDVHSTLAAFF 83 (323)
T ss_dssp EECSCGGGHHHHHHHH
T ss_pred EEECCchhHHHHHHHH
Confidence 9999988766655443
No 208
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.98 E-value=1.2e-05 Score=77.90 Aligned_cols=149 Identities=14% Similarity=0.120 Sum_probs=89.9
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
+|+||+|+| .|.||..++..+.+.. +++++ +++|+.... .|.....+-+ +..++.+++|+++++.++|+|
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~-~~eLv~~~d~~~~~~-----~G~d~gel~g--~~~gv~v~~dl~~ll~~~DVV 77 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAP-DATLVGALDRTGSPQ-----LGQDAGAFLG--KQTGVALTDDIERVCAEADYL 77 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCT-TEEEEEEBCCTTCTT-----TTSBTTTTTT--CCCSCBCBCCHHHHHHHCSEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEEecCccc-----ccccHHHHhC--CCCCceecCCHHHHhcCCCEE
Confidence 578999999 8999999999998764 26666 467764211 1111110001 112455678999988899999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~ 283 (460)
|-+++.....+.+....+ .+..+|..++|+..+.. +.+.+... ...++.+|++..-+.-
T Consensus 78 IDfT~p~a~~~~~~~al~---~G~~vVigTTG~s~~~~----~~L~~aa~----~~~vv~a~N~s~Gv~l---------- 136 (272)
T 4f3y_A 78 IDFTLPEGTLVHLDAALR---HDVKLVIGTTGFSEPQK----AQLRAAGE----KIALVFSANMSVGVNV---------- 136 (272)
T ss_dssp EECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHH----HHHHHHTT----TSEEEECSCCCHHHHH----------
T ss_pred EEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHH----HHHHHHhc----cCCEEEECCCCHHHHH----------
Confidence 999887766655554433 46677777888865422 23333321 1346788876542200
Q ss_pred CCHHHHHHHHHHHhcCCceEEE
Q 012596 284 KDRKLANAVQQLLASKHLRIST 305 (460)
Q Consensus 284 ~d~~~~~~l~~lL~~~g~~v~~ 305 (460)
-.+..+.+.++|. .++.++.
T Consensus 137 -~~~~~~~aa~~l~-~~~diei 156 (272)
T 4f3y_A 137 -TMKLLEFAAKQFA-QGYDIEI 156 (272)
T ss_dssp -HHHHHHHHHHHTS-SSCEEEE
T ss_pred -HHHHHHHHHHhcC-cCCCEEE
Confidence 0244566667775 2455543
No 209
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.97 E-value=1.7e-05 Score=80.16 Aligned_cols=95 Identities=17% Similarity=0.257 Sum_probs=67.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+.+||+|||+|.||..++..|++. ++|++++|+.++++++.+.... . .+ .+.-.++++++++++|+||.
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~---~~V~V~~R~~~~a~~la~~~~~-~-----~~--d~~~~~~l~~ll~~~DvVIn 83 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFATP-L-----KV--DASNFDKLVEVMKEFELVIG 83 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSEE-E-----EC--CTTCHHHHHHHHTTCSCEEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCe-E-----EE--ecCCHHHHHHHHhCCCEEEE
Confidence 468999999999999999999986 6899999999998887654210 0 00 00011346677889999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
|+|......++.. .++.++.+++++.
T Consensus 84 ~~P~~~~~~v~~a---~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 84 ALPGFLGFKSIKA---AIKSKVDMVDVSF 109 (365)
T ss_dssp CCCHHHHHHHHHH---HHHTTCCEEECCC
T ss_pred CCChhhhHHHHHH---HHHhCCeEEEccC
Confidence 9997654444433 3345777888764
No 210
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.97 E-value=1.1e-05 Score=79.40 Aligned_cols=86 Identities=10% Similarity=0.201 Sum_probs=61.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V-~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (460)
+++||+|||+|.||..++..|.+.+ +.++ .++++++++++.+.+. +...++.+++++ ++|+
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~-~~~~v~v~d~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~~D~ 72 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLP-GAALVRLASSNPDNLALVPPG---------------CVIESDWRSVVSAPEVEA 72 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCT-TEEEEEEEESCHHHHTTCCTT---------------CEEESSTHHHHTCTTCCE
T ss_pred CcceEEEECCcHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHhh---------------CcccCCHHHHhhCCCCCE
Confidence 4689999999999999999998863 2564 4899998765433221 235668888775 7999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEE
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFI 230 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV 230 (460)
|++|+|.....+++.... +.|..++
T Consensus 73 V~i~tp~~~h~~~~~~al---~~Gk~v~ 97 (315)
T 3c1a_A 73 VIIATPPATHAEITLAAI---ASGKAVL 97 (315)
T ss_dssp EEEESCGGGHHHHHHHHH---HTTCEEE
T ss_pred EEEeCChHHHHHHHHHHH---HCCCcEE
Confidence 999999887666655433 2455444
No 211
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.95 E-value=2.5e-05 Score=80.22 Aligned_cols=91 Identities=14% Similarity=0.011 Sum_probs=69.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
..++|+|||+|.+|..+|..+...| .+|+++++++.........|. .+ .+++++++.+|+|+.
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafG--a~Viv~d~dp~~a~~A~~~G~--------------~v-v~LeElL~~ADIVv~ 308 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAG--ARVKVTEVDPICALQAAMDGF--------------EV-VTLDDAASTADIVVT 308 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTTC--------------EE-CCHHHHGGGCSEEEE
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCC--CEEEEEeCCcchhhHHHhcCc--------------ee-ccHHHHHhhCCEEEE
Confidence 4689999999999999999999888 899999999865444333332 22 268889999999999
Q ss_pred ccchhcHHHHH-HHhhhcCCCCCeEEEeccCC
Q 012596 206 AMPVQFSSSFL-EGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 206 aVp~~~~~~vl-~~i~~~l~~~~iIV~~~~Gi 236 (460)
++....+ + .+....++++.++|++..|-
T Consensus 309 atgt~~l---I~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 309 TTGNKDV---ITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp CCSSSSS---BCHHHHHHSCTTEEEEECSSST
T ss_pred CCCCccc---cCHHHHhcCCCCeEEEEcCCCC
Confidence 8764432 2 23445578899999998764
No 212
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.93 E-value=3.4e-05 Score=75.93 Aligned_cols=87 Identities=14% Similarity=0.180 Sum_probs=55.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
+++||+|||+|.||..++..|.+.. +.+|+ +++++++.++. .|.. ....+++.+. .++|+|+
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~-~~elvav~d~~~~~~~~---~g~~------------~~~~~~l~~~-~~~DvVi 70 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAP-DFEIAGIVRRNPAEVPF---ELQP------------FRVVSDIEQL-ESVDVAL 70 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCT-TEEEEEEECC----------CCTT------------SCEESSGGGS-SSCCEEE
T ss_pred CCCEEEEECChHHHHHHHHHHhcCC-CCEEEEEEcCCHHHHHH---cCCC------------cCCHHHHHhC-CCCCEEE
Confidence 4579999999999999999998753 26777 78998875543 2211 1123455554 7899999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEe
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
+|+|.....+++... ++.|..+++.
T Consensus 71 iatp~~~h~~~~~~a---l~aG~~Vi~e 95 (304)
T 3bio_A 71 VCSPSREVERTALEI---LKKGICTADS 95 (304)
T ss_dssp ECSCHHHHHHHHHHH---HTTTCEEEEC
T ss_pred ECCCchhhHHHHHHH---HHcCCeEEEC
Confidence 999987765555443 3346666654
No 213
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.92 E-value=1e-05 Score=79.39 Aligned_cols=98 Identities=13% Similarity=0.205 Sum_probs=69.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
+.++|+|||+|.||.+++..|++.| . +|++|+|+.++++++.+.... . .. .+...+++.+.++++|+||
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G--~~~V~v~nR~~~ka~~la~~~~~-~------~~-~~~~~~~~~~~~~~aDivI 209 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTA--AERIDMANRTVEKAERLVREGDE-R------RS-AYFSLAEAETRLAEYDIII 209 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTT--CSEEEEECSSHHHHHHHHHHSCS-S------SC-CEECHHHHHHTGGGCSEEE
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHhhh-c------cC-ceeeHHHHHhhhccCCEEE
Confidence 3579999999999999999999998 6 899999999998888765210 0 00 1111134556678999999
Q ss_pred EccchhcHHHH--HHHh-hhcCCCCCeEEEecc
Q 012596 205 HAMPVQFSSSF--LEGI-SDYVDPGLPFISLSK 234 (460)
Q Consensus 205 laVp~~~~~~v--l~~i-~~~l~~~~iIV~~~~ 234 (460)
.|+|......+ . .+ ...++++.+++++.-
T Consensus 210 n~t~~~~~~~~~~~-~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 210 NTTSVGMHPRVEVQ-PLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp ECSCTTCSSCCSCC-SSCCTTCCTTCEEEECCC
T ss_pred ECCCCCCCCCCCCC-CCCHHHcCCCCEEEEcCC
Confidence 99996532110 0 01 245677889999875
No 214
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.91 E-value=1.4e-05 Score=79.19 Aligned_cols=80 Identities=14% Similarity=0.012 Sum_probs=57.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCce-EEeCCHHhhcC--CCc
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENV-IATTDAKTALL--GAD 201 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i-~a~~~~~ea~~--~aD 201 (460)
+++||||||+|.||..++..|.+.+ +.+|+ ++++++++++++.+.. ++ .+++|.+++++ ++|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~-~~~~~av~d~~~~~~~~~a~~~-------------~~~~~~~~~~~ll~~~~~D 69 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAG-NGEVVAVSSRTLESAQAFANKY-------------HLPKAYDKLEDMLADESID 69 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHC-SEEEEEEECSCSSTTCC---CC-------------CCSCEESCHHHHHTCTTCC
T ss_pred CceEEEEEechHHHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHHHc-------------CCCcccCCHHHHhcCCCCC
Confidence 5689999999999999999998765 25555 7899887665554421 11 25678999887 789
Q ss_pred EEEEccchhcHHHHHHHh
Q 012596 202 YCLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i 219 (460)
+|++|+|.....+++...
T Consensus 70 ~V~i~tp~~~h~~~~~~a 87 (329)
T 3evn_A 70 VIYVATINQDHYKVAKAA 87 (329)
T ss_dssp EEEECSCGGGHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHH
Confidence 999999987766655443
No 215
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.90 E-value=5.7e-05 Score=73.94 Aligned_cols=102 Identities=10% Similarity=0.133 Sum_probs=67.6
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHH----HHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQS----INEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~----l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
|||+|||+|.+|.++|..|+.++.-.++.++|.++++++- +..... ++ .....+..+.|.+ ++++||+|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~---~~---~~~~~i~~~~d~~-~~~~aDvV 73 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA---GI---DKYPKIVGGADYS-LLKGSEII 73 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG---GG---TCCCEEEEESCGG-GGTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc---cC---CCCCeEecCCCHH-HhCCCCEE
Confidence 7999999999999999999988754589999999865432 222100 00 1112344566765 47999999
Q ss_pred EEccc--h---h-----------cHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 204 LHAMP--V---Q-----------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 204 ilaVp--~---~-----------~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
|++-- . . .++++.++|.++. ++.+++.++|-++
T Consensus 74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~-p~aivlvvsNPvd 122 (294)
T 2x0j_A 74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMD 122 (294)
T ss_dssp EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHH
T ss_pred EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcC-CceEEEEecCcch
Confidence 99752 1 1 1344455666654 5778888888543
No 216
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.90 E-value=3.7e-05 Score=76.31 Aligned_cols=81 Identities=11% Similarity=0.043 Sum_probs=60.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCC-CCe-EEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKS-QLK-VYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~-~~~-V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (460)
++||||||+|.||..++..|.+.+. +.+ |.+++|++++++++.+.... + .+.+|.+++++ +.|+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~---------~---~~~~~~~~ll~~~~vD~ 69 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDI---------P---KAYGSYEELAKDPNVEV 69 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTC---------S---CEESSHHHHHHCTTCCE
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCC---------C---cccCCHHHHhcCCCCCE
Confidence 4799999999999999999986541 134 44789999988887764210 0 34678888876 6999
Q ss_pred EEEccchhcHHHHHHHh
Q 012596 203 CLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i 219 (460)
|++|+|.....+++...
T Consensus 70 V~i~tp~~~H~~~~~~a 86 (334)
T 3ohs_X 70 AYVGTQHPQHKAAVMLC 86 (334)
T ss_dssp EEECCCGGGHHHHHHHH
T ss_pred EEECCCcHHHHHHHHHH
Confidence 99999987765554443
No 217
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.90 E-value=2.2e-05 Score=78.94 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=66.2
Q ss_pred cCCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012596 125 ERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (460)
|+++||||||+|.||.. ++..|.+.. +.+|+ ++|+++++++.+.+... ...+++|.+++++ +.
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~~------------~~~~~~~~~~ll~~~~v 69 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQ-DIRIVAACDSDLERARRVHRFIS------------DIPVLDNVPAMLNQVPL 69 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCT-TEEEEEEECSSHHHHGGGGGTSC------------SCCEESSHHHHHHHSCC
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHHhcC------------CCcccCCHHHHhcCCCC
Confidence 35689999999999985 888888753 26766 88999988776665311 1345678988876 46
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
|+|++|+|.....+++....+ .|..|+ +-|-+.
T Consensus 70 D~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla 102 (359)
T 3m2t_A 70 DAVVMAGPPQLHFEMGLLAMS---KGVNVF-VEKPPC 102 (359)
T ss_dssp SEEEECSCHHHHHHHHHHHHH---TTCEEE-ECSCSC
T ss_pred CEEEEcCCcHHHHHHHHHHHH---CCCeEE-EECCCc
Confidence 999999998766555544333 344433 444443
No 218
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.88 E-value=5.6e-05 Score=75.36 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=64.8
Q ss_pred cCCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012596 125 ERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (460)
++|+||||||+|.||.. ++..+.+.. +.+|+ ++|+++++++++.++.. . .++++|.+++++ +.
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~-~~~lvav~d~~~~~a~~~a~~~g---------~---~~~y~d~~ell~~~~i 87 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAE-NCVVTAIASRDLTRAREMADRFS---------V---PHAFGSYEEMLASDVI 87 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCS-SEEEEEEECSSHHHHHHHHHHHT---------C---SEEESSHHHHHHCSSC
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCC-CeEEEEEECCCHHHHHHHHHHcC---------C---CeeeCCHHHHhcCCCC
Confidence 45789999999999975 466666543 26666 78999999888876521 0 145678998874 58
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
|+|++|+|...-.++.....+ .|.-| -|-|-+.
T Consensus 88 DaV~I~tP~~~H~~~~~~al~---aGkhV-l~EKPla 120 (350)
T 4had_A 88 DAVYIPLPTSQHIEWSIKAAD---AGKHV-VCEKPLA 120 (350)
T ss_dssp SEEEECSCGGGHHHHHHHHHH---TTCEE-EECSCCC
T ss_pred CEEEEeCCCchhHHHHHHHHh---cCCEE-EEeCCcc
Confidence 999999998766555444333 24433 3455443
No 219
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.87 E-value=4.7e-05 Score=78.19 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=68.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh-cCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiVil 205 (460)
.++|.|+|+|.+|..++..|.+.| ++|++++++++.++.+++.|....+ .+..-+ +.+.++ ++++|+||+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~~~v~~~~~~g~~vi~-GDat~~------~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDPDHIETLRKFGMKVFY-GDATRM------DLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCHHHHHHHHHTTCCCEE-SCTTCH------HHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHhCCCeEEE-cCCCCH------HHHHhcCCCccCEEEE
Confidence 478999999999999999999999 9999999999999998877653221 111100 012222 578999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
+++.......+-...+.+.++..||.-.+
T Consensus 75 ~~~~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 75 AIDDPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CCSSHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCCChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 99986654433333344445555555443
No 220
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.86 E-value=5.4e-05 Score=76.15 Aligned_cols=97 Identities=8% Similarity=0.010 Sum_probs=65.1
Q ss_pred hccCCCeEEEECcchHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC-
Q 012596 123 ILERTNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG- 199 (460)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~-~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~- 199 (460)
-||+++||||||+|.+|. .++..+...+ .+|+ ++|+++++++++.+... ...+++|.++++++
T Consensus 22 ~Mm~~irvgiiG~G~~~~~~~~~~~~~~~--~~lvav~d~~~~~a~~~a~~~~------------~~~~~~~~~~ll~~~ 87 (361)
T 3u3x_A 22 SMMDELRFAAVGLNHNHIYGQVNCLLRAG--ARLAGFHEKDDALAAEFSAVYA------------DARRIATAEEILEDE 87 (361)
T ss_dssp ----CCEEEEECCCSTTHHHHHHHHHHTT--CEEEEEECSCHHHHHHHHHHSS------------SCCEESCHHHHHTCT
T ss_pred hhccCcEEEEECcCHHHHHHHHHHhhcCC--cEEEEEEcCCHHHHHHHHHHcC------------CCcccCCHHHHhcCC
Confidence 366678999999999995 5677776666 7755 88999998888876521 12456789998864
Q ss_pred -CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 200 -ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 200 -aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
.|+|++|+|.....+++....+ .|..|+ +-|-+.
T Consensus 88 ~vD~V~I~tp~~~H~~~~~~al~---aGkhVl-~EKPla 122 (361)
T 3u3x_A 88 NIGLIVSAAVSSERAELAIRAMQ---HGKDVL-VDKPGM 122 (361)
T ss_dssp TCCEEEECCCHHHHHHHHHHHHH---TTCEEE-EESCSC
T ss_pred CCCEEEEeCChHHHHHHHHHHHH---CCCeEE-EeCCCC
Confidence 8999999998765555444333 344433 445443
No 221
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.85 E-value=4.3e-05 Score=74.51 Aligned_cols=153 Identities=14% Similarity=0.144 Sum_probs=88.1
Q ss_pred hccCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCC
Q 012596 123 ILERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (460)
Q Consensus 123 ~~~~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~a 200 (460)
.|++++||+|+| +|.||..++..+.+.. +.+++ +++++.... .|.....+-+.. +.++.+++|+++++.++
T Consensus 17 ~m~~~irV~V~Ga~GrMGr~i~~~v~~~~-~~eLvg~vd~~~~~~-----~G~d~gel~G~~-~~gv~v~~dl~~ll~~a 89 (288)
T 3ijp_A 17 QGPGSMRLTVVGANGRMGRELITAIQRRK-DVELCAVLVRKGSSF-----VDKDASILIGSD-FLGVRITDDPESAFSNT 89 (288)
T ss_dssp ----CEEEEESSTTSHHHHHHHHHHHTCS-SEEEEEEBCCTTCTT-----TTSBGGGGTTCS-CCSCBCBSCHHHHTTSC
T ss_pred hccCCeEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCCccc-----cccchHHhhccC-cCCceeeCCHHHHhcCC
Confidence 566678999999 9999999999988653 25655 557754210 111111010110 23456678999989999
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEE
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~ 280 (460)
|+||-+++...+.+.+... ++.+..+|..++|+..+.. +.+.+... ...++..|++..-+.-
T Consensus 90 DVvIDFT~p~a~~~~~~~~---l~~Gv~vViGTTG~~~e~~----~~L~~aa~----~~~~~~a~N~SiGv~l------- 151 (288)
T 3ijp_A 90 EGILDFSQPQASVLYANYA---AQKSLIHIIGTTGFSKTEE----AQIADFAK----YTTIVKSGNMSLGVNL------- 151 (288)
T ss_dssp SEEEECSCHHHHHHHHHHH---HHHTCEEEECCCCCCHHHH----HHHHHHHT----TSEEEECSCCCHHHHH-------
T ss_pred CEEEEcCCHHHHHHHHHHH---HHcCCCEEEECCCCCHHHH----HHHHHHhC----cCCEEEECCCcHHHHH-------
Confidence 9999887765554444433 3347778888889875432 23333322 1356888887642200
Q ss_pred EccCCHHHHHHHHHHHhcCCceEEE
Q 012596 281 VASKDRKLANAVQQLLASKHLRIST 305 (460)
Q Consensus 281 i~~~d~~~~~~l~~lL~~~g~~v~~ 305 (460)
-....+.+.+.|. .++.++.
T Consensus 152 ----l~~l~~~aa~~l~-~~~dieI 171 (288)
T 3ijp_A 152 ----LANLVKRAAKALD-DDFDIEI 171 (288)
T ss_dssp ----HHHHHHHHHHHSC-TTSEEEE
T ss_pred ----HHHHHHHHHHhcC-CCCCEEE
Confidence 0234566666665 2455543
No 222
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.84 E-value=4.6e-05 Score=75.65 Aligned_cols=79 Identities=9% Similarity=0.014 Sum_probs=58.3
Q ss_pred CCCeEEEECcchHHH-HHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCc
Q 012596 126 RTNKVVVLGGGSFGT-AMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~-~~A~~La~~G~~~~V-~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (460)
+++||||||+|.+|. .++..|...+ .+| .++|+++++++.+.+... .+.+.+|.+++++ +.|
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~--~~lvav~d~~~~~~~~~a~~~~------------~~~~~~~~~~ll~~~~~D 68 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAG--AELAGVFESDSDNRAKFTSLFP------------SVPFAASAEQLITDASID 68 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTT--CEEEEEECSCTTSCHHHHHHST------------TCCBCSCHHHHHTCTTCC
T ss_pred CccEEEEECCChHHHHHhhhhhcCCC--cEEEEEeCCCHHHHHHHHHhcC------------CCcccCCHHHHhhCCCCC
Confidence 568999999999996 6777776666 775 589999988877766421 1234568888876 689
Q ss_pred EEEEccchhcHHHHHHH
Q 012596 202 YCLHAMPVQFSSSFLEG 218 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~ 218 (460)
+|++|+|.....+++..
T Consensus 69 ~V~i~tp~~~h~~~~~~ 85 (336)
T 2p2s_A 69 LIACAVIPCDRAELALR 85 (336)
T ss_dssp EEEECSCGGGHHHHHHH
T ss_pred EEEEeCChhhHHHHHHH
Confidence 99999998766555443
No 223
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.84 E-value=8.7e-05 Score=73.81 Aligned_cols=101 Identities=18% Similarity=0.171 Sum_probs=68.7
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCC-----CeEEEEeCC----HHHHHH----HHhhcCCCccCCCCCCCCceEEeCC
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQ-----LKVYMLMRD----PAVCQS----INEKHCNCRYFPEQKLPENVIATTD 192 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~-----~~V~v~~r~----~~~~~~----l~~~g~~~~~~~~~~l~~~i~a~~~ 192 (460)
.|||+|+|+ |.+|..++..|+..|.- .+|.++|++ .++++. +.. .. ..+...+..+++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~-~~-------~~~~~~i~~~~~ 76 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD-CA-------FPLLAGMTAHAD 76 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT-TT-------CTTEEEEEEESS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh-hc-------ccccCcEEEecC
Confidence 589999998 99999999999987720 279999998 544432 222 10 011235667788
Q ss_pred HHhhcCCCcEEEEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 193 AKTALLGADYCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 193 ~~ea~~~aDiVilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
..+++++||+||++.... .+.++++.+.++..++..+|..+|-
T Consensus 77 ~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNP 135 (329)
T 1b8p_A 77 PMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNP 135 (329)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCc
Confidence 888899999999875311 1334555666654456788888773
No 224
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.80 E-value=0.0001 Score=73.73 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=63.3
Q ss_pred ccCCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC--
Q 012596 124 LERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG-- 199 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~-- 199 (460)
|++++||||||+|.||.. .+..|.+.. +.+|+ ++++++++++ +.. ..+.+++|.++++++
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~-~~~l~av~d~~~~~~~---~~~------------~~~~~~~~~~~ll~~~~ 67 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTP-GLELAGVSSSDASKVH---ADW------------PAIPVVSDPQMLFNDPS 67 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTST-TEEEEEEECSCHHHHH---TTC------------SSCCEESCHHHHHHCSS
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCC-CcEEEEEECCCHHHHH---hhC------------CCCceECCHHHHhcCCC
Confidence 656789999999999997 677777652 26765 8899987654 211 123466789988764
Q ss_pred CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
.|+|++|+|.....+++....+ .|..|+ +-|-+.
T Consensus 68 vD~V~i~tp~~~H~~~~~~al~---aGkhV~-~EKPla 101 (352)
T 3kux_A 68 IDLIVIPTPNDTHFPLAQSALA---AGKHVV-VDKPFT 101 (352)
T ss_dssp CCEEEECSCTTTHHHHHHHHHH---TTCEEE-ECSSCC
T ss_pred CCEEEEeCChHHHHHHHHHHHH---CCCcEE-EECCCc
Confidence 8999999998766555443332 354443 345443
No 225
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.78 E-value=6.8e-06 Score=79.92 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=63.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
.+++.|||+|.||.+++..|++.| . +|++++|+.++++++.+.. .....+++.++++++|+||.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G--~~~v~v~~R~~~~a~~la~~~-------------~~~~~~~~~~~~~~aDiVIn 181 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIV--RPTLTVANRTMSRFNNWSLNI-------------NKINLSHAESHLDEFDIIIN 181 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTC--CSCCEEECSCGGGGTTCCSCC-------------EEECHHHHHHTGGGCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHhc-------------ccccHhhHHHHhcCCCEEEE
Confidence 578999999999999999999998 6 8999999987655443210 11112356666789999999
Q ss_pred ccchhcHHHHHHHh-hhcCCCCCeEEEecc
Q 012596 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (460)
Q Consensus 206 aVp~~~~~~vl~~i-~~~l~~~~iIV~~~~ 234 (460)
++|..-...+-..+ ...++++.+++++.-
T Consensus 182 aTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY 211 (277)
T 3don_A 182 TTPAGMNGNTDSVISLNRLASHTLVSDIVY 211 (277)
T ss_dssp CCC-------CCSSCCTTCCSSCEEEESCC
T ss_pred CccCCCCCCCcCCCCHHHcCCCCEEEEecC
Confidence 99964222110001 345678889999874
No 226
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.78 E-value=7.2e-05 Score=74.33 Aligned_cols=101 Identities=20% Similarity=0.196 Sum_probs=65.9
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHH--HHHHhhcCCCccCCCCCCCCceEE---eCCHHhhcCC
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVC--QSINEKHCNCRYFPEQKLPENVIA---TTDAKTALLG 199 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~--~~l~~~g~~~~~~~~~~l~~~i~a---~~~~~ea~~~ 199 (460)
++|||+|+| +|.+|..++..|+..|..++|+++|++++.. ..+.... .+..+.. ++|..+++++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~----------~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMD----------TGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSC----------SSCEEEEEESHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhccc----------ccceEEEEeCCCCHHHHcCC
Confidence 358999999 7999999999999876435899999887522 2222211 1112333 3467788999
Q ss_pred CcEEEEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 200 ADYCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 200 aDiVilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
+|+||++.... .+.++++.+.++- ++..++..+|-++
T Consensus 77 aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNPv~ 129 (326)
T 1smk_A 77 MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNPVN 129 (326)
T ss_dssp CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHH
T ss_pred CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCchH
Confidence 99999987421 1344445555544 5667777776444
No 227
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.78 E-value=9.4e-05 Score=75.04 Aligned_cols=79 Identities=13% Similarity=0.106 Sum_probs=60.0
Q ss_pred CCeEEEECcc-hHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCcE
Q 012596 127 TNKVVVLGGG-SFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (460)
Q Consensus 127 ~~kI~IIGaG-~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (460)
++||||||+| .||..++..|.+.. +.+|+ ++|+++++++++.+.. ++..++|.+++++ +.|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~-------------g~~~~~~~~ell~~~~vD~ 67 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHP-DAQIVAACDPNEDVRERFGKEY-------------GIPVFATLAEMMQHVQMDA 67 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCT-TEEEEEEECSCHHHHHHHHHHH-------------TCCEESSHHHHHHHSCCSE
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCC-CeEEEEEEeCCHHHHHHHHHHc-------------CCCeECCHHHHHcCCCCCE
Confidence 5799999999 99999999998754 25655 8899998887776542 1235678888876 5999
Q ss_pred EEEccchhcHHHHHHHh
Q 012596 203 CLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i 219 (460)
|++++|.....+++...
T Consensus 68 V~i~tp~~~H~~~~~~a 84 (387)
T 3moi_A 68 VYIASPHQFHCEHVVQA 84 (387)
T ss_dssp EEECSCGGGHHHHHHHH
T ss_pred EEEcCCcHHHHHHHHHH
Confidence 99999987665554443
No 228
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.77 E-value=2.2e-05 Score=79.61 Aligned_cols=96 Identities=17% Similarity=0.205 Sum_probs=68.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEE--eCCHHhhcCCCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIA--TTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a--~~~~~ea~~~aDi 202 (460)
..++|+|+|+|.||..++..+...| .+|+++|+++++.+.+.+. |.... ... ..++.+.++++|+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G--a~V~~~d~~~~~l~~~~~~~g~~~~----------~~~~~~~~l~~~l~~aDv 234 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG--ATVTVLDINIDKLRQLDAEFCGRIH----------TRYSSAYELEGAVKRADL 234 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTTSSE----------EEECCHHHHHHHHHHCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhcCCeeE----------eccCCHHHHHHHHcCCCE
Confidence 3589999999999999999999988 8999999999888777653 32100 000 1245566788999
Q ss_pred EEEccchhc--HHHH-HHHhhhcCCCCCeEEEec
Q 012596 203 CLHAMPVQF--SSSF-LEGISDYVDPGLPFISLS 233 (460)
Q Consensus 203 VilaVp~~~--~~~v-l~~i~~~l~~~~iIV~~~ 233 (460)
||.|++... ...+ .++..+.++++.+||+++
T Consensus 235 Vi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 235 VIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred EEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 999885322 1111 234455678889999886
No 229
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.76 E-value=5.2e-05 Score=66.29 Aligned_cols=91 Identities=8% Similarity=0.025 Sum_probs=64.7
Q ss_pred hccCCCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 123 ILERTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 123 ~~~~~~kI~IIGa----G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
++.+..+|+|||+ |.+|..++..|.+.| ++ +|+.++.. +.+ .++.+..+++++.+
T Consensus 18 ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G--~~--v~~Vnp~~-~~i----------------~G~~~y~sl~~l~~ 76 (144)
T 2d59_A 18 ILTRYKKIALVGASPKPERDANIVMKYLLEHG--YD--VYPVNPKY-EEV----------------LGRKCYPSVLDIPD 76 (144)
T ss_dssp HHHHCCEEEEETCCSCTTSHHHHHHHHHHHTT--CE--EEEECTTC-SEE----------------TTEECBSSGGGCSS
T ss_pred HHcCCCEEEEEccCCCCCchHHHHHHHHHHCC--CE--EEEECCCC-CeE----------------CCeeccCCHHHcCC
Confidence 4433689999999 799999999999998 76 56666531 000 13455667888777
Q ss_pred CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 199 ~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
..|++++++|...+.++++++.+.- .+.+ .++.|..
T Consensus 77 ~vDlvvi~vp~~~~~~vv~~~~~~g-i~~i--~~~~g~~ 112 (144)
T 2d59_A 77 KIEVVDLFVKPKLTMEYVEQAIKKG-AKVV--WFQYNTY 112 (144)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHHT-CSEE--EECTTCC
T ss_pred CCCEEEEEeCHHHHHHHHHHHHHcC-CCEE--EECCCch
Confidence 8999999999999888888776532 1223 3556665
No 230
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.75 E-value=8.5e-05 Score=75.87 Aligned_cols=102 Identities=16% Similarity=0.138 Sum_probs=66.6
Q ss_pred chhccCCCeEEEECcchHHHHHHHHHHhcC-------CCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCC
Q 012596 121 TDILERTNKVVVLGGGSFGTAMAAHVANKK-------SQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD 192 (460)
Q Consensus 121 ~~~~~~~~kI~IIGaG~mG~~~A~~La~~G-------~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~ 192 (460)
.+-|++++||||||+|.||...+..|.+.+ .+.+|+ ++|+++++++++.++... .++++|
T Consensus 20 ~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~------------~~~y~d 87 (412)
T 4gqa_A 20 FQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGA------------EKAYGD 87 (412)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTC------------SEEESS
T ss_pred cccccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCC------------CeEECC
Confidence 345766789999999999999888887642 013555 789999998888765210 145678
Q ss_pred HHhhcC--CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCcc
Q 012596 193 AKTALL--GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (460)
Q Consensus 193 ~~ea~~--~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~ 238 (460)
.+++++ +.|+|++|+|.....++.....+ .|.-| -|-|-+..
T Consensus 88 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~---aGkhV-l~EKP~a~ 131 (412)
T 4gqa_A 88 WRELVNDPQVDVVDITSPNHLHYTMAMAAIA---AGKHV-YCEKPLAV 131 (412)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---TTCEE-EEESCSCS
T ss_pred HHHHhcCCCCCEEEECCCcHHHHHHHHHHHH---cCCCe-EeecCCcC
Confidence 988875 58999999998766555443332 34433 34554443
No 231
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.74 E-value=3.2e-05 Score=79.16 Aligned_cols=106 Identities=14% Similarity=0.171 Sum_probs=66.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-C--CCceE--Ee--------CC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-L--PENVI--AT--------TD 192 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~-l--~~~i~--a~--------~~ 192 (460)
...+|+|||+|.+|...+..+...| .+|+++|+++++.+.+.+.|.....+.... . ..+.. .. .+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 3579999999999999999999888 899999999887777655443210000000 0 00000 00 02
Q ss_pred HHhhcCCCcEEEEc--cchhcHHHHH-HHhhhcCCCCCeEEEec
Q 012596 193 AKTALLGADYCLHA--MPVQFSSSFL-EGISDYVDPGLPFISLS 233 (460)
Q Consensus 193 ~~ea~~~aDiVila--Vp~~~~~~vl-~~i~~~l~~~~iIV~~~ 233 (460)
+.+.+.++|+||.+ +|......++ ++....++++.+||+++
T Consensus 249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 45666789999999 5521111111 23344567899999987
No 232
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.73 E-value=0.00013 Score=71.15 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=72.7
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCc
Q 012596 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (460)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (460)
.+.+||+|+|+ |.||...+..+.+.| +++ ++..++.+. |. . ..++.+.++++++.+ ++|
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~g--~~~-V~~V~p~~~------g~--~-------~~G~~vy~sl~el~~~~~~D 66 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAYG--TKM-VGGVTPGKG------GT--T-------HLGLPVFNTVREAVAATGAT 66 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHT--CEE-EEEECTTCT------TC--E-------ETTEEEESSHHHHHHHHCCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC--CeE-EEEeCCCcc------cc--e-------eCCeeccCCHHHHhhcCCCC
Confidence 45689999998 999999999999888 773 344444211 00 0 013567778888877 899
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
++++++|.....+++++..+. .-..+|.++.|+..+..+.+.+..++
T Consensus 67 ~viI~tP~~~~~~~~~ea~~~--Gi~~iVi~t~G~~~~~~~~l~~~A~~ 113 (288)
T 2nu8_A 67 ASVIYVPAPFCKDSILEAIDA--GIKLIITITEGIPTLDMLTVKVKLDE 113 (288)
T ss_dssp EEEECCCGGGHHHHHHHHHHT--TCSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred EEEEecCHHHHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999988888776552 11345667778876543445555444
No 233
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.73 E-value=5.2e-05 Score=75.64 Aligned_cols=107 Identities=13% Similarity=0.128 Sum_probs=64.5
Q ss_pred CCeEEEECcchHHHHHHHH-HHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC--CcE
Q 012596 127 TNKVVVLGGGSFGTAMAAH-VANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--ADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~-La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~--aDi 202 (460)
++||||||+|.||..+... +.....+.+|+ +++++++..+...+. ..+.+.+|+++++++ .|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~-------------~~~~~~~~~~~ll~~~~~D~ 68 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIY-------------SHIHFTSDLDEVLNDPDVKL 68 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGG-------------TTCEEESCTHHHHTCTTEEE
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhc-------------CCCceECCHHHHhcCCCCCE
Confidence 5799999999999965444 43322236776 889987654222211 124567889998875 899
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc--cchhhhHHHHHHH
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE--LNTLRMMSQIIPQ 250 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~--~~~~~~l~e~l~~ 250 (460)
|++|+|.....+++.... +.|..|+ +-|-+. .+..+.+.+..++
T Consensus 69 V~i~tp~~~h~~~~~~al---~aGk~Vl-~EKP~a~~~~e~~~l~~~a~~ 114 (345)
T 3f4l_A 69 VVVCTHADSHFEYAKRAL---EAGKNVL-VEKPFTPTLAQAKELFALAKS 114 (345)
T ss_dssp EEECSCGGGHHHHHHHHH---HTTCEEE-ECSSSCSSHHHHHHHHHHHHH
T ss_pred EEEcCChHHHHHHHHHHH---HcCCcEE-EeCCCCCCHHHHHHHHHHHHH
Confidence 999999876655544333 2354444 445333 3333344444433
No 234
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.72 E-value=8.2e-05 Score=76.79 Aligned_cols=85 Identities=8% Similarity=0.155 Sum_probs=61.5
Q ss_pred cCCCeEEEECcchHHH-HHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC--C
Q 012596 125 ERTNKVVVLGGGSFGT-AMAAHVANKKSQLKV-YMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL--G 199 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~-~~A~~La~~G~~~~V-~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~--~ 199 (460)
++++||+|||+|.||. .++..|.+.+ +.+| .++|+++++++.+.+. |... ..+...+|.+++++ +
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~-~~~lvav~d~~~~~~~~~a~~~g~~~---------~~~~~~~~~~~ll~~~~ 150 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQ-HSRIEALVSGNAEKAKIVAAEYGVDP---------RKIYDYSNFDKIAKDPK 150 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCS-SEEEEEEECSCHHHHHHHHHHTTCCG---------GGEECSSSGGGGGGCTT
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCC-CcEEEEEEcCCHHHHHHHHHHhCCCc---------ccccccCCHHHHhcCCC
Confidence 3568999999999997 8999887653 2565 5889999888877664 2210 11334567888776 7
Q ss_pred CcEEEEccchhcHHHHHHHh
Q 012596 200 ADYCLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i 219 (460)
+|+|++|+|.....+++...
T Consensus 151 vD~V~iatp~~~h~~~~~~a 170 (433)
T 1h6d_A 151 IDAVYIILPNSLHAEFAIRA 170 (433)
T ss_dssp CCEEEECSCGGGHHHHHHHH
T ss_pred CCEEEEcCCchhHHHHHHHH
Confidence 89999999988766655443
No 235
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.67 E-value=0.00025 Score=73.27 Aligned_cols=83 Identities=13% Similarity=0.146 Sum_probs=60.1
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh----cCCCccCCCCCCCCceEEeC----CHH
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK----HCNCRYFPEQKLPENVIATT----DAK 194 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~----g~~~~~~~~~~l~~~i~a~~----~~~ 194 (460)
+|+++||+|||+|.||...+..|.+.. +.+|+ ++|+++++++++.+. |. + ...+.+ |.+
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~~-~~~lvav~d~~~~~~~~~a~~~~~~g~----------~-~~~~~~~~~~~~~ 84 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARRD-DVEIVAFADPDPYMVGRAQEILKKNGK----------K-PAKVFGNGNDDYK 84 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTCT-TEEEEEEECSCHHHHHHHHHHHHHTTC----------C-CCEEECSSTTTHH
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHHHHHhcCC----------C-CCceeccCCCCHH
Confidence 345689999999999999999998752 26654 889999888776542 21 0 134556 888
Q ss_pred hhcC--CCcEEEEccchhcHHHHHHH
Q 012596 195 TALL--GADYCLHAMPVQFSSSFLEG 218 (460)
Q Consensus 195 ea~~--~aDiVilaVp~~~~~~vl~~ 218 (460)
++++ +.|+|++|+|.....+++..
T Consensus 85 ~ll~~~~vD~V~i~tp~~~h~~~~~~ 110 (444)
T 2ixa_A 85 NMLKDKNIDAVFVSSPWEWHHEHGVA 110 (444)
T ss_dssp HHTTCTTCCEEEECCCGGGHHHHHHH
T ss_pred HHhcCCCCCEEEEcCCcHHHHHHHHH
Confidence 8886 58999999998765554443
No 236
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.67 E-value=4.5e-05 Score=77.07 Aligned_cols=95 Identities=19% Similarity=0.264 Sum_probs=66.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEE--eCCHHhhcCCCcEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIA--TTDAKTALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a--~~~~~ea~~~aDiV 203 (460)
.++|+|+|+|.+|..++..+...| .+|++++|++++.+.+.+. |.. + .... ..+.+++++++|+|
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G--a~V~~~d~~~~~~~~~~~~~g~~--------~--~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG--AQVTILDVNHKRLQYLDDVFGGR--------V--ITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTTS--------E--EEEECCHHHHHHHHHHCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHhcCce--------E--EEecCCHHHHHHHHhCCCEE
Confidence 589999999999999999999999 8999999999887776653 211 0 0001 12455667789999
Q ss_pred EEccchhc--HHHH-HHHhhhcCCCCCeEEEec
Q 012596 204 LHAMPVQF--SSSF-LEGISDYVDPGLPFISLS 233 (460)
Q Consensus 204 ilaVp~~~--~~~v-l~~i~~~l~~~~iIV~~~ 233 (460)
|.+++... ...+ .++..+.++++..||+++
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99998542 1111 234455667788888875
No 237
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.66 E-value=0.00018 Score=71.58 Aligned_cols=95 Identities=15% Similarity=0.162 Sum_probs=66.5
Q ss_pred CCeEEEECcc-hHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCcE
Q 012596 127 TNKVVVLGGG-SFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (460)
Q Consensus 127 ~~kI~IIGaG-~mG~~~A~~La~~G~~~~V-~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (460)
++||||||+| .||...+..|.+.+.+.+| .++|+++++++++.+... ...+++|.+++++ +.|+
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~------------~~~~~~~~~~ll~~~~vD~ 85 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG------------NPAVFDSYEELLESGLVDA 85 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS------------SCEEESCHHHHHHSSCCSE
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhC------------CCcccCCHHHHhcCCCCCE
Confidence 5799999999 8999999999876222565 588999998888766421 0245678988875 5899
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
|++|+|.....+++....+ .|..|+ +-|-+.
T Consensus 86 V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla 116 (340)
T 1zh8_A 86 VDLTLPVELNLPFIEKALR---KGVHVI-CEKPIS 116 (340)
T ss_dssp EEECCCGGGHHHHHHHHHH---TTCEEE-EESSSS
T ss_pred EEEeCCchHHHHHHHHHHH---CCCcEE-EeCCCC
Confidence 9999998766555544333 354433 345443
No 238
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.66 E-value=3.1e-05 Score=76.71 Aligned_cols=84 Identities=12% Similarity=0.156 Sum_probs=57.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V-~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
+++||+|||+|+||..++..|.+.+ +.++ .+++++++. .+ + .++..++|.++++.++|+|+
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~~-~~elvav~d~~~~~--~~---~------------~gv~~~~d~~~ll~~~DvVi 63 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQP-DMDLVGIFSRRATL--DT---K------------TPVFDVADVDKHADDVDVLF 63 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCS-SEEEEEEEESSSCC--SS---S------------SCEEEGGGGGGTTTTCSEEE
T ss_pred CCCEEEEEeecHHHHHHHHHHhcCC-CCEEEEEEcCCHHH--hh---c------------CCCceeCCHHHHhcCCCEEE
Confidence 4689999999999999999998764 2554 488887532 10 0 13455677878777899999
Q ss_pred EccchhcH-HHHHHHhhhcCCCCCeEEE
Q 012596 205 HAMPVQFS-SSFLEGISDYVDPGLPFIS 231 (460)
Q Consensus 205 laVp~~~~-~~vl~~i~~~l~~~~iIV~ 231 (460)
+|+|.... +.+.. .++.|..+|.
T Consensus 64 iatp~~~h~~~~~~----al~aG~~Vv~ 87 (320)
T 1f06_A 64 LCMGSATDIPEQAP----KFAQFACTVD 87 (320)
T ss_dssp ECSCTTTHHHHHHH----HHTTTSEEEC
T ss_pred EcCCcHHHHHHHHH----HHHCCCEEEE
Confidence 99998754 33332 3334555554
No 239
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.64 E-value=0.00036 Score=70.12 Aligned_cols=91 Identities=16% Similarity=0.227 Sum_probs=61.0
Q ss_pred CCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCc
Q 012596 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (460)
+++||||||+|.||.. .+..|.+.. +.+|+ +++++++++. +.. ..+.+++|.+++++ +.|
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~---~~~------------~~~~~~~~~~~ll~~~~~D 69 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVP-GLNLAFVASRDEEKVK---RDL------------PDVTVIASPEAAVQHPDVD 69 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTST-TEEEEEEECSCHHHHH---HHC------------TTSEEESCHHHHHTCTTCS
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCC-CeEEEEEEcCCHHHHH---hhC------------CCCcEECCHHHHhcCCCCC
Confidence 4579999999999996 666666542 26765 8899987654 211 02356779999887 789
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+|++|+|.....+++.... +.|..|+ +-|-+
T Consensus 70 ~V~i~tp~~~H~~~~~~al---~aGk~Vl-~EKPl 100 (364)
T 3e82_A 70 LVVIASPNATHAPLARLAL---NAGKHVV-VDKPF 100 (364)
T ss_dssp EEEECSCGGGHHHHHHHHH---HTTCEEE-ECSCS
T ss_pred EEEEeCChHHHHHHHHHHH---HCCCcEE-EeCCC
Confidence 9999999876655544333 2354444 45533
No 240
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.63 E-value=0.00041 Score=71.49 Aligned_cols=108 Identities=15% Similarity=0.158 Sum_probs=67.1
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh--cC--CCccCCCC-CC-----CCceEEeCC
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK--HC--NCRYFPEQ-KL-----PENVIATTD 192 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~--g~--~~~~~~~~-~l-----~~~i~a~~~ 192 (460)
.++++||||||+|.||..++..+.+.. +.+|. ++|+++++++...++ |. ......+. .+ ...+.+++|
T Consensus 20 ~~k~IRVGIIGaG~iG~~~~~~l~~~~-~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D 98 (446)
T 3upl_A 20 TGKPIRIGLIGAGEMGTDIVTQVARMQ-GIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDD 98 (446)
T ss_dssp TTCCEEEEEECCSHHHHHHHHHHTTSS-SEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESC
T ss_pred cCCceEEEEECChHHHHHHHHHHhhCC-CcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECC
Confidence 345689999999999999999887642 25544 789999888776543 31 00000000 00 113567889
Q ss_pred HHhhcC--CCcEEEEccchhc-HHHHHHHhhhcCCCCCeEEEeccC
Q 012596 193 AKTALL--GADYCLHAMPVQF-SSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 193 ~~ea~~--~aDiVilaVp~~~-~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
.+++++ +.|+|++++|... ..++. ...++.|+-|+...++
T Consensus 99 ~eeLL~d~dIDaVviaTp~p~~H~e~a---~~AL~AGKHVv~~nk~ 141 (446)
T 3upl_A 99 NDLILSNPLIDVIIDATGIPEVGAETG---IAAIRNGKHLVMMNVE 141 (446)
T ss_dssp HHHHHTCTTCCEEEECSCCHHHHHHHH---HHHHHTTCEEEECCHH
T ss_pred HHHHhcCCCCCEEEEcCCChHHHHHHH---HHHHHcCCcEEecCcc
Confidence 999886 5899999998642 22222 2233457777755443
No 241
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.63 E-value=0.00011 Score=75.54 Aligned_cols=97 Identities=14% Similarity=0.203 Sum_probs=65.5
Q ss_pred cCCCeEEEECcch---HHHHHHHHHHhcCCCCeEE--EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 125 ERTNKVVVLGGGS---FGTAMAAHVANKKSQLKVY--MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 125 ~~~~kI~IIGaG~---mG~~~A~~La~~G~~~~V~--v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
|+++||||||+|. ||...+..+...+ +.+|+ ++++++++++++.++ |.. ...+++|.+++++
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~~-----------~~~~~~~~~~ll~ 102 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDD-HYELVAGALSSTPEKAEASGRELGLD-----------PSRVYSDFKEMAI 102 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTS-CEEEEEEECCSSHHHHHHHHHHHTCC-----------GGGBCSCHHHHHH
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHcCCC-----------cccccCCHHHHHh
Confidence 4567999999999 9999888887665 25665 679999988887664 321 0124568888776
Q ss_pred C-------CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 199 G-------ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 199 ~-------aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
+ .|+|++|+|.....+++.... +.|..|+ |-|-+.
T Consensus 103 ~~~~~~~~vD~V~I~tp~~~H~~~~~~al---~aGkhVl-~EKPla 144 (417)
T 3v5n_A 103 REAKLKNGIEAVAIVTPNHVHYAAAKEFL---KRGIHVI-CDKPLT 144 (417)
T ss_dssp HHHHCTTCCSEEEECSCTTSHHHHHHHHH---TTTCEEE-EESSSC
T ss_pred cccccCCCCcEEEECCCcHHHHHHHHHHH---hCCCeEE-EECCCc
Confidence 4 899999999877655544433 3454443 455443
No 242
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.62 E-value=8.8e-05 Score=75.36 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=66.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-----CCCc-eE-Ee--------
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-----LPEN-VI-AT-------- 190 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~-----l~~~-i~-a~-------- 190 (460)
...+|+|+|+|.+|...+..+...| .+|+++|+++++.+.+.+.|.....+.... -..+ .+ ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 4689999999999999999999888 789999999877766665443211000000 0000 00 00
Q ss_pred CCHHhhcCCCcEEEEcc--chhcHHHHH-HHhhhcCCCCCeEEEec
Q 012596 191 TDAKTALLGADYCLHAM--PVQFSSSFL-EGISDYVDPGLPFISLS 233 (460)
Q Consensus 191 ~~~~ea~~~aDiVilaV--p~~~~~~vl-~~i~~~l~~~~iIV~~~ 233 (460)
..+.+.+.++|+||.++ |......++ ++....++++.+||++.
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 01556678999999998 422111111 33445577899999886
No 243
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.60 E-value=0.00022 Score=74.56 Aligned_cols=83 Identities=10% Similarity=0.046 Sum_probs=61.9
Q ss_pred cCCCeEEEECc----chHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 125 ERTNKVVVLGG----GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 125 ~~~~kI~IIGa----G~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
|+++||||||+ |.||..++..|.+...+.+|+ ++|+++++++.+.+. |. + .+.+++|.+++++
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~----------~-~~~~~~d~~ell~ 105 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQL----------K-HATGFDSLESFAQ 105 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTC----------T-TCEEESCHHHHHH
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCC----------C-cceeeCCHHHHhc
Confidence 45689999999 999999999998861126754 889999988887764 21 1 1346678988875
Q ss_pred --CCcEEEEccchhcHHHHHHH
Q 012596 199 --GADYCLHAMPVQFSSSFLEG 218 (460)
Q Consensus 199 --~aDiVilaVp~~~~~~vl~~ 218 (460)
+.|+|++|+|.....+++..
T Consensus 106 ~~~vD~V~I~tp~~~H~~~~~~ 127 (479)
T 2nvw_A 106 YKDIDMIVVSVKVPEHYEVVKN 127 (479)
T ss_dssp CTTCSEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEcCCcHHHHHHHHH
Confidence 68999999998765554443
No 244
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.59 E-value=0.00029 Score=70.64 Aligned_cols=92 Identities=11% Similarity=0.149 Sum_probs=61.0
Q ss_pred CCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCc
Q 012596 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (460)
+++||||||+|.||.. .+..|.+.. +.+|+ +++++++++ .+.. ..+.+++|.+++++ +.|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~---~~~~------------~~~~~~~~~~~ll~~~~vD 67 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLD-EYQISKIMTSRTEEV---KRDF------------PDAEVVHELEEITNDPAIE 67 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCT-TEEEEEEECSCHHHH---HHHC------------TTSEEESSTHHHHTCTTCC
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCC-CeEEEEEEcCCHHHH---HhhC------------CCCceECCHHHHhcCCCCC
Confidence 5689999999999997 566666542 26765 788988652 2221 02356678988887 689
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
+|++|+|.....+++....+ .|..|+ +-|-+.
T Consensus 68 ~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla 99 (358)
T 3gdo_A 68 LVIVTTPSGLHYEHTMACIQ---AGKHVV-MEKPMT 99 (358)
T ss_dssp EEEECSCTTTHHHHHHHHHH---TTCEEE-EESSCC
T ss_pred EEEEcCCcHHHHHHHHHHHH---cCCeEE-EecCCc
Confidence 99999998766555444332 354444 345433
No 245
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.58 E-value=8.9e-05 Score=77.18 Aligned_cols=87 Identities=14% Similarity=0.185 Sum_probs=60.5
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhh-cCCCcEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTA-LLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiV 203 (460)
..|||.|+|+|.+|..+|..|.+.| |+|+++|++++.++.+.+. +.. ...++-.-+ +.++++ +++||++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~--~~v~vId~d~~~~~~~~~~~~~~-~i~Gd~~~~------~~L~~Agi~~ad~~ 72 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGEN--NDITIVDKDGDRLRELQDKYDLR-VVNGHASHP------DVLHEAGAQDADML 72 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTT--EEEEEEESCHHHHHHHHHHSSCE-EEESCTTCH------HHHHHHTTTTCSEE
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHhcCcE-EEEEcCCCH------HHHHhcCCCcCCEE
Confidence 3589999999999999999999988 9999999999999888764 211 001110000 012232 5789999
Q ss_pred EEccchhcHHHHHHHhhh
Q 012596 204 LHAMPVQFSSSFLEGISD 221 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~ 221 (460)
+.++.++.+.-+.-.+++
T Consensus 73 ia~t~~De~Nl~~~~~Ak 90 (461)
T 4g65_A 73 VAVTNTDETNMAACQVAF 90 (461)
T ss_dssp EECCSCHHHHHHHHHHHH
T ss_pred EEEcCChHHHHHHHHHHH
Confidence 999888765544444443
No 246
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.57 E-value=8.2e-05 Score=71.91 Aligned_cols=96 Identities=16% Similarity=0.266 Sum_probs=62.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiVi 204 (460)
+.++|.|+|+|.||.+++..|++.| .+|++|+|+.++++++.+.... + . .+.+. +.+++.+ ++|+||
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G--~~v~v~~R~~~~a~~l~~~~~~--~-~------~~~~~-~~~~~~~~~~DivI 185 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQ--QNIVLANRTFSKTKELAERFQP--Y-G------NIQAV-SMDSIPLQTYDLVI 185 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTT--CEEEEEESSHHHHHHHHHHHGG--G-S------CEEEE-EGGGCCCSCCSEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHccc--c-C------CeEEe-eHHHhccCCCCEEE
Confidence 3579999999999999999999999 8999999999888887654110 0 0 12222 3444323 899999
Q ss_pred EccchhcHHHHHHHh-hhcCCCCCeEEEecc
Q 012596 205 HAMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (460)
Q Consensus 205 laVp~~~~~~vl~~i-~~~l~~~~iIV~~~~ 234 (460)
.++|......+. .+ ...++++.+++++.-
T Consensus 186 n~t~~~~~~~~~-~i~~~~l~~~~~v~D~~y 215 (272)
T 1p77_A 186 NATSAGLSGGTA-SVDAEILKLGSAFYDMQY 215 (272)
T ss_dssp ECCCC--------CCCHHHHHHCSCEEESCC
T ss_pred ECCCCCCCCCCC-CCCHHHcCCCCEEEEeeC
Confidence 999965432221 11 112345677888764
No 247
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.57 E-value=0.00011 Score=74.92 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=66.6
Q ss_pred cCCCeEEEECcch---HHHHHHHHHHhcCCCCeEE--EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 125 ERTNKVVVLGGGS---FGTAMAAHVANKKSQLKVY--MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 125 ~~~~kI~IIGaG~---mG~~~A~~La~~G~~~~V~--v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
|+++||||||+|. ||...+..+...+ +.+|+ ++|+++++++++.++ |.. ...+++|.+++++
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~~-----------~~~~~~~~~~ll~ 77 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDN-TFVLVAGAFDIDPIRGSAFGEQLGVD-----------SERCYADYLSMFE 77 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGG-SEEEEEEECCSSHHHHHHHHHHTTCC-----------GGGBCSSHHHHHH
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCC-CeEEEEEEeCCCHHHHHHHHHHhCCC-----------cceeeCCHHHHHh
Confidence 3568999999999 9999998887765 25665 579999988887764 221 0124568888775
Q ss_pred C-------CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 199 G-------ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 199 ~-------aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
+ .|+|++|+|.....+++....+ .|..|+ |-|-+.
T Consensus 78 ~~~~~~~~vD~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla 119 (398)
T 3dty_A 78 QEARRADGIQAVSIATPNGTHYSITKAALE---AGLHVV-CEKPLC 119 (398)
T ss_dssp HHTTCTTCCSEEEEESCGGGHHHHHHHHHH---TTCEEE-ECSCSC
T ss_pred cccccCCCCCEEEECCCcHHHHHHHHHHHH---CCCeEE-EeCCCc
Confidence 3 8999999998776555544433 344433 345443
No 248
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.55 E-value=9.2e-05 Score=72.06 Aligned_cols=96 Identities=9% Similarity=0.116 Sum_probs=65.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
+.+++.|+|+|.+|.+++..|++.| . +|++++|+.++++++.+..... ..+.+. +.+++..++|+||
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G--~~~v~v~~R~~~~a~~la~~~~~~---------~~~~~~-~~~~l~~~aDiII 192 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQ--PASITVTNRTFAKAEQLAELVAAY---------GEVKAQ-AFEQLKQSYDVII 192 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTC--CSEEEEEESSHHHHHHHHHHHGGG---------SCEEEE-EGGGCCSCEEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHhcC--CCeEEEEECCHHHHHHHHHHhhcc---------CCeeEe-eHHHhcCCCCEEE
Confidence 3579999999999999999999998 5 8999999999888876642110 012222 3445447899999
Q ss_pred EccchhcHHHHHHHh-hhcCCCCCeEEEecc
Q 012596 205 HAMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (460)
Q Consensus 205 laVp~~~~~~vl~~i-~~~l~~~~iIV~~~~ 234 (460)
.++|..-..+.. .+ ...++++++++++.-
T Consensus 193 naTp~gm~~~~~-~l~~~~l~~~~~V~DlvY 222 (281)
T 3o8q_A 193 NSTSASLDGELP-AIDPVIFSSRSVCYDMMY 222 (281)
T ss_dssp ECSCCCC----C-SCCGGGEEEEEEEEESCC
T ss_pred EcCcCCCCCCCC-CCCHHHhCcCCEEEEecC
Confidence 999975322210 11 234566778888864
No 249
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.54 E-value=9.5e-05 Score=64.32 Aligned_cols=90 Identities=17% Similarity=0.155 Sum_probs=64.1
Q ss_pred CCCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 126 RTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 126 ~~~kI~IIGa----G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
...+|+|||+ |.+|..++.+|.+.| ++ +|++++.+. +. .+ .++.+..+++++.+..|
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G--~~--v~~vnp~~~------~~--------~i-~G~~~~~sl~el~~~vD 72 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQG--YR--VLPVNPRFQ------GE--------EL-FGEEAVASLLDLKEPVD 72 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTT--CE--EEEECGGGT------TS--------EE-TTEECBSSGGGCCSCCS
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCC--CE--EEEeCCCcc------cC--------cC-CCEEecCCHHHCCCCCC
Confidence 4579999999 899999999999999 76 667776421 00 00 13455667888777899
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
++++++|...+.++++++.+.- .+.++ ++.|..
T Consensus 73 lavi~vp~~~~~~v~~~~~~~g-i~~i~--~~~g~~ 105 (140)
T 1iuk_A 73 ILDVFRPPSALMDHLPEVLALR-PGLVW--LQSGIR 105 (140)
T ss_dssp EEEECSCHHHHTTTHHHHHHHC-CSCEE--ECTTCC
T ss_pred EEEEEeCHHHHHHHHHHHHHcC-CCEEE--EcCCcC
Confidence 9999999988888887766532 23343 345555
No 250
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.52 E-value=0.00022 Score=68.84 Aligned_cols=96 Identities=13% Similarity=0.174 Sum_probs=65.6
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVi 204 (460)
+.+++.|+|+|.||.+++..|++.| .+|++++|+.++++.+.+.-.. + ..+.+ .+.+++. ..+|+||
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G--~~V~v~~R~~~~~~~la~~~~~--~-------~~~~~-~~~~~~~~~~~DivV 185 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLD--CAVTITNRTVSRAEELAKLFAH--T-------GSIQA-LSMDELEGHEFDLII 185 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHTGG--G-------SSEEE-CCSGGGTTCCCSEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHhhc--c-------CCeeE-ecHHHhccCCCCEEE
Confidence 3579999999999999999999999 8999999999888877654110 0 01222 2333332 4899999
Q ss_pred EccchhcHHHHHHHh-hhcCCCCCeEEEecc
Q 012596 205 HAMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (460)
Q Consensus 205 laVp~~~~~~vl~~i-~~~l~~~~iIV~~~~ 234 (460)
.+++.....++ ..+ ...++++.+++++.-
T Consensus 186 n~t~~~~~~~~-~~i~~~~l~~~~~v~D~~y 215 (271)
T 1nyt_A 186 NATSSGISGDI-PAIPSSLIHPGIYCYDMFY 215 (271)
T ss_dssp ECCSCGGGTCC-CCCCGGGCCTTCEEEESCC
T ss_pred ECCCCCCCCCC-CCCCHHHcCCCCEEEEecc
Confidence 99996433211 112 123567788888764
No 251
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.51 E-value=0.00018 Score=74.33 Aligned_cols=81 Identities=11% Similarity=0.022 Sum_probs=61.0
Q ss_pred CCCeEEEECc----chHHHHHHHHHHhc-CCCCeE-EEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 126 RTNKVVVLGG----GSFGTAMAAHVANK-KSQLKV-YMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 126 ~~~kI~IIGa----G~mG~~~A~~La~~-G~~~~V-~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
+++||||||+ |.||..++..|.+. . +.+| .++++++++++.+.+. |. + .+.+++|.+++++
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~-~~~lvav~d~~~~~~~~~a~~~g~----------~-~~~~~~~~~~ll~ 86 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSS-QFQITALYSPKIETSIATIQRLKL----------S-NATAFPTLESFAS 86 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTT-TEEEEEEECSSHHHHHHHHHHTTC----------T-TCEEESSHHHHHH
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCC-CeEEEEEEeCCHHHHHHHHHHcCC----------C-cceeeCCHHHHhc
Confidence 4579999999 99999999999886 2 2665 4889999888877764 21 1 2346678988875
Q ss_pred --CCcEEEEccchhcHHHHHHH
Q 012596 199 --GADYCLHAMPVQFSSSFLEG 218 (460)
Q Consensus 199 --~aDiVilaVp~~~~~~vl~~ 218 (460)
+.|+|++|+|.....+++..
T Consensus 87 ~~~vD~V~i~tp~~~H~~~~~~ 108 (438)
T 3btv_A 87 SSTIDMIVIAIQVASHYEVVMP 108 (438)
T ss_dssp CSSCSEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEeCCcHHHHHHHHH
Confidence 68999999998765544433
No 252
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.51 E-value=6.2e-05 Score=70.34 Aligned_cols=81 Identities=15% Similarity=0.203 Sum_probs=52.4
Q ss_pred CCCeEEEECcchHHHHHHHH--HHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAH--VANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~--La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
+.++|+|||+|++|..++.. +...| ++++ ++|.++++.... ..+. .+...+++++.+++.|+
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~~~~g--~~iVg~~D~dp~k~g~~---------i~gv----~V~~~~dl~eli~~~D~ 148 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFTKNNN--TKISMAFDINESKIGTE---------VGGV----PVYNLDDLEQHVKDESV 148 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC--------CCEEEEEESCTTTTTCE---------ETTE----EEEEGGGHHHHCSSCCE
T ss_pred CCCEEEEEccCHHHHHHHHHHhcccCC--cEEEEEEeCCHHHHHhH---------hcCC----eeechhhHHHHHHhCCE
Confidence 34789999999999999994 33445 6655 789888533210 0011 23345678888876799
Q ss_pred EEEccchhcHHHHHHHhhh
Q 012596 203 CLHAMPVQFSSSFLEGISD 221 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~ 221 (460)
|++|+|+....++.+.+.+
T Consensus 149 ViIAvPs~~~~ei~~~l~~ 167 (215)
T 2vt3_A 149 AILTVPAVAAQSITDRLVA 167 (215)
T ss_dssp EEECSCHHHHHHHHHHHHH
T ss_pred EEEecCchhHHHHHHHHHH
Confidence 9999998777777766644
No 253
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.51 E-value=0.00025 Score=72.47 Aligned_cols=95 Identities=13% Similarity=0.198 Sum_probs=64.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
..++|+|||+|.||..++..|...| . +|++++|++++++.+.+. |.. . ...+++.+.+.++|+|
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G--~~~V~v~~r~~~ra~~la~~~g~~--~----------~~~~~l~~~l~~aDvV 231 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRG--VRAVLVANRTYERAVELARDLGGE--A----------VRFDELVDHLARSDVV 231 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHC--CSEEEEECSSHHHHHHHHHHHTCE--E----------CCGGGHHHHHHTCSEE
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHcCCc--e----------ecHHhHHHHhcCCCEE
Confidence 4689999999999999999999988 6 899999999887655443 321 0 0013566777899999
Q ss_pred EEccchhc-H--HHHHHH-h-hhcCCCCCeEEEecc
Q 012596 204 LHAMPVQF-S--SSFLEG-I-SDYVDPGLPFISLSK 234 (460)
Q Consensus 204 ilaVp~~~-~--~~vl~~-i-~~~l~~~~iIV~~~~ 234 (460)
|.|++... + .+.++. + +..-.++.+++++..
T Consensus 232 i~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 232 VSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp EECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred EEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 99998643 2 233433 2 111123456777654
No 254
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.51 E-value=0.0001 Score=77.09 Aligned_cols=78 Identities=21% Similarity=0.350 Sum_probs=49.6
Q ss_pred CeEEEECcchHHHHH--HHHHHhc----CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 128 NKVVVLGGGSFGTAM--AAHVANK----KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~--A~~La~~----G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
|||+|||+|+.|.+. ...|+.. +...+|.++|.++++++........ .......+..+..++|.++++++||
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~--~~~~~~~~~~i~~t~d~~eAl~gAD 78 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARK--YVEELNSPVKVVKTESLDEAIEGAD 78 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHH--HHHHHTCCCEEEEESCHHHHHTTCS
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHH--HHHHcCCCeEEEEeCCHHHHhCCCC
Confidence 799999999988653 2234432 1125799999999866432211000 0000012235778899999999999
Q ss_pred EEEEcc
Q 012596 202 YCLHAM 207 (460)
Q Consensus 202 iVilaV 207 (460)
+||++.
T Consensus 79 ~Vi~~~ 84 (477)
T 3u95_A 79 FIINTA 84 (477)
T ss_dssp EEEECC
T ss_pred EEEECc
Confidence 999986
No 255
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.51 E-value=0.00013 Score=68.48 Aligned_cols=93 Identities=11% Similarity=0.063 Sum_probs=63.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH---Hhh-cCCCcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---KTA-LLGADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~---~ea-~~~aDi 202 (460)
.++|.|+|+|.+|..++..|.+.| + |++++++++.++.+. .+....+ .+ .++. .++ ++++|.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g--~-v~vid~~~~~~~~~~-~~~~~i~-gd---------~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVRKKVLR-SGANFVH-GD---------PTRVSDLEKANVRGARA 74 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE--E-EEEESCGGGHHHHHH-TTCEEEE-SC---------TTCHHHHHHTTCTTCSE
T ss_pred CCEEEEECCChHHHHHHHHHHhCC--e-EEEEECCHHHHHHHh-cCCeEEE-cC---------CCCHHHHHhcCcchhcE
Confidence 578999999999999999999988 8 999999998887776 4421110 00 0122 233 678999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
||++++.+...-.+-...+.+.++..+|...
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 75 VIVDLESDSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEEcCCCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 9999998765444444444445554444433
No 256
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.50 E-value=0.00052 Score=66.91 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=73.1
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCc
Q 012596 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (460)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (460)
.+.+||+|+|+ |.||..++..+.+.| +++ ++..++... |. . ..++.+..+++++.+ ++|
T Consensus 5 ~~~~~VaVvGasG~~G~~~~~~l~~~g--~~~-v~~VnP~~~------g~--~-------i~G~~vy~sl~el~~~~~~D 66 (288)
T 1oi7_A 5 NRETRVLVQGITGREGQFHTKQMLTYG--TKI-VAGVTPGKG------GM--E-------VLGVPVYDTVKEAVAHHEVD 66 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHT--CEE-EEEECTTCT------TC--E-------ETTEEEESSHHHHHHHSCCS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHcC--CeE-EEEECCCCC------Cc--e-------ECCEEeeCCHHHHhhcCCCC
Confidence 45689999998 999999999999888 773 344444210 00 0 114567778888877 899
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCC-eEEEeccCCccchhhhHHHHHHH
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGL-PFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~-iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
++++++|.....+++++..+. +. .+|..+.|+..+..+.+.+..++
T Consensus 67 v~Ii~vp~~~~~~~~~ea~~~---Gi~~vVi~t~G~~~~~~~~l~~~a~~ 113 (288)
T 1oi7_A 67 ASIIFVPAPAAADAALEAAHA---GIPLIVLITEGIPTLDMVRAVEEIKA 113 (288)
T ss_dssp EEEECCCHHHHHHHHHHHHHT---TCSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred EEEEecCHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999988888776552 32 36667888876543445455444
No 257
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.50 E-value=0.00032 Score=70.34 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=64.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCC------CCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKS------QLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL- 198 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~------~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~- 198 (460)
..||||||+|.||...+..+.+... +.+|+ ++|+++++++++.++... ..+.+|.+++++
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~------------~~~~~d~~~ll~~ 73 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGW------------STTETDWRTLLER 73 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTC------------SEEESCHHHHTTC
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCC------------CcccCCHHHHhcC
Confidence 3689999999999988887765320 12444 789999988887764210 145678999875
Q ss_pred -CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCcc
Q 012596 199 -GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (460)
Q Consensus 199 -~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~ 238 (460)
+.|+|++|+|.....++.....+ .|.. |-|-|-+..
T Consensus 74 ~~iDaV~I~tP~~~H~~~~~~al~---aGkh-Vl~EKPla~ 110 (390)
T 4h3v_A 74 DDVQLVDVCTPGDSHAEIAIAALE---AGKH-VLCEKPLAN 110 (390)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHHH---TTCE-EEEESSSCS
T ss_pred CCCCEEEEeCChHHHHHHHHHHHH---cCCC-ceeecCccc
Confidence 57999999998766555443332 3443 335555544
No 258
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.49 E-value=0.00036 Score=70.05 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=61.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcC------CCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKK------SQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL- 198 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G------~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~- 198 (460)
..||||||+|.||...+..+.... .+.+|+ ++|+++++++++.++... .++++|.+++++
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~------------~~~y~d~~ell~~ 92 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGF------------EKATADWRALIAD 92 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTC------------SEEESCHHHHHHC
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCC------------CeecCCHHHHhcC
Confidence 358999999999998777664321 014555 889999888887764210 145678988875
Q ss_pred -CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCcc
Q 012596 199 -GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (460)
Q Consensus 199 -~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~ 238 (460)
+.|+|++|+|...-.++.....+ .|.- |-|-|-+..
T Consensus 93 ~~iDaV~IatP~~~H~~~a~~al~---aGkh-Vl~EKPla~ 129 (393)
T 4fb5_A 93 PEVDVVSVTTPNQFHAEMAIAALE---AGKH-VWCEKPMAP 129 (393)
T ss_dssp TTCCEEEECSCGGGHHHHHHHHHH---TTCE-EEECSCSCS
T ss_pred CCCcEEEECCChHHHHHHHHHHHh---cCCe-EEEccCCcc
Confidence 57999999998766555443333 2443 334565544
No 259
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.48 E-value=0.00073 Score=66.65 Aligned_cols=100 Identities=22% Similarity=0.280 Sum_probs=63.2
Q ss_pred CeEEEEC-cchHHHHHHHHHHhc-CCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEe--CCHHhhcCCCcE
Q 012596 128 NKVVVLG-GGSFGTAMAAHVANK-KSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIAT--TDAKTALLGADY 202 (460)
Q Consensus 128 ~kI~IIG-aG~mG~~~A~~La~~-G~~~~V~v~~r~~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~--~~~~ea~~~aDi 202 (460)
|||+||| +|.+|..++..|+.. +...++.++|+++. ..+.+.-.+. ..+..+... ++..+++++||+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~--------~~~~~v~~~~~~~~~~~~~~aDi 72 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHI--------PTAVKIKGFSGEDATPALEGADV 72 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTS--------CSSEEEEEECSSCCHHHHTTCSE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCC--------CCCceEEEecCCCcHHHhCCCCE
Confidence 7999999 899999999999876 54468999999862 1111111111 112223321 244566899999
Q ss_pred EEEccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 203 CLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 203 VilaVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
||++.... .+.++.+.+.++. ++.+++..+|-+
T Consensus 73 vii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~-p~a~vlvvtNPv 121 (312)
T 3hhp_A 73 VLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNPV 121 (312)
T ss_dssp EEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCH
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEecCcc
Confidence 99987321 1334445566654 577888887743
No 260
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.45 E-value=0.00049 Score=67.57 Aligned_cols=103 Identities=13% Similarity=0.135 Sum_probs=63.1
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 128 ~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r--~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
|||+|+| +|.+|..++..|+..|...++.++|+ ++++++.....-.. ... +..++.+..+..++++++|+||
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~--~~~---~~~~~~v~~~~~~a~~~aDvVi 75 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH--GIA---YDSNTRVRQGGYEDTAGSDVVV 75 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH--HHT---TTCCCEEEECCGGGGTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHH--HHh---hCCCcEEEeCCHHHhCCCCEEE
Confidence 6999999 99999999999998774347999999 77554322111000 000 1112233222356789999999
Q ss_pred Eccchh----------------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 205 HAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 205 laVp~~----------------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
++.... .+.++++.+.++ .++..++..+|-+
T Consensus 76 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv 122 (303)
T 1o6z_A 76 ITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPV 122 (303)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSH
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChH
Confidence 986421 133444555554 4567777777643
No 261
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.44 E-value=0.00036 Score=70.45 Aligned_cols=95 Identities=15% Similarity=0.249 Sum_probs=64.2
Q ss_pred CCCeEEEEC-cchHHHH-HH----HHHHhcCCCCeE----------EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEE
Q 012596 126 RTNKVVVLG-GGSFGTA-MA----AHVANKKSQLKV----------YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA 189 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~-~A----~~La~~G~~~~V----------~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a 189 (460)
+.+||+||| +|.||.. .+ ..+.+.+. ..+ .++++++++++.+.+... . ..+
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~-~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~---------~---~~~ 71 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGG-VRLKNGDRIMPDPILVGRSAEKVEALAKRFN---------I---ARW 71 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTS-EECTTSCEEEEEEEEECSSSHHHHHHHHHTT---------C---CCE
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCc-eeecCCcccceeeEEEcCCHHHHHHHHHHhC---------C---Ccc
Confidence 457999999 9999998 66 66665541 222 389999998888876421 0 035
Q ss_pred eCCHHhhcCC--CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 190 TTDAKTALLG--ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 190 ~~~~~ea~~~--aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
++|.++++++ .|+|++|+|.....+++... ++.|..|+ +-|-+.
T Consensus 72 ~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~a---l~~Gk~V~-~EKP~a 117 (383)
T 3oqb_A 72 TTDLDAALADKNDTMFFDAATTQARPGLLTQA---INAGKHVY-CEKPIA 117 (383)
T ss_dssp ESCHHHHHHCSSCCEEEECSCSSSSHHHHHHH---HTTTCEEE-ECSCSC
T ss_pred cCCHHHHhcCCCCCEEEECCCchHHHHHHHHH---HHCCCeEE-EcCCCC
Confidence 5789888754 89999999986655544333 33455555 666443
No 262
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.40 E-value=0.00037 Score=70.48 Aligned_cols=106 Identities=11% Similarity=0.207 Sum_probs=68.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
..||+|||+| +|...+..+.+...+.+++ +++++.++++++.++. ++...+|.++++++.|+|++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~-------------gv~~~~~~~~l~~~~D~v~i 72 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF-------------GIPLYTSPEQITGMPDIACI 72 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT-------------TCCEESSGGGCCSCCSEEEE
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh-------------CCCEECCHHHHhcCCCEEEE
Confidence 5799999999 8998888887653225665 7899999888887652 13356789999999999999
Q ss_pred ccchhcH----HHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 206 AMPVQFS----SSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 206 aVp~~~~----~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
++|.... .++.... ++.|.-|+ +-|-+..+..+.+.+..++
T Consensus 73 ~~p~~~h~~~~~~~a~~a---l~aGkhVl-~EKPl~~~ea~~l~~~A~~ 117 (372)
T 4gmf_A 73 VVRSTVAGGAGTQLARHF---LARGVHVI-QEHPLHPDDISSLQTLAQE 117 (372)
T ss_dssp CCC--CTTSHHHHHHHHH---HHTTCEEE-EESCCCHHHHHHHHHHHHH
T ss_pred ECCCcccchhHHHHHHHH---HHcCCcEE-EecCCCHHHHHHHHHHHHH
Confidence 9997543 3333322 23344333 3454544434444444443
No 263
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.37 E-value=0.0014 Score=64.02 Aligned_cols=107 Identities=15% Similarity=0.176 Sum_probs=74.5
Q ss_pred hccCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--C
Q 012596 123 ILERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--G 199 (460)
Q Consensus 123 ~~~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~ 199 (460)
++.+..+|+|+|+ |.||...+..|.+.| ++ .++..++.+. |. .+ .++.+..+++++.+ +
T Consensus 9 l~~~~~~v~V~Gasg~~G~~~~~~l~~~g--~~-~V~~VnP~~~------g~--------~i-~G~~vy~sl~el~~~~~ 70 (294)
T 2yv1_A 9 LLDENTKAIVQGITGRQGSFHTKKMLECG--TK-IVGGVTPGKG------GQ--------NV-HGVPVFDTVKEAVKETD 70 (294)
T ss_dssp SSCTTCCEEEETTTSHHHHHHHHHHHHTT--CC-EEEEECTTCT------TC--------EE-TTEEEESSHHHHHHHHC
T ss_pred HhCCCCEEEEECCCCCHHHHHHHHHHhCC--Ce-EEEEeCCCCC------Cc--------eE-CCEeeeCCHHHHhhcCC
Confidence 3444578999998 999999999999988 66 4555555210 00 00 14567788988877 8
Q ss_pred CcEEEEccchhcHHHHHHHhhhcCCCCC-eEEEeccCCccchhhhHHHHHHH
Q 012596 200 ADYCLHAMPVQFSSSFLEGISDYVDPGL-PFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i~~~l~~~~-iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
+|++++++|...+.+++++..+. +. .+|.++.|+..+..+.+.+..++
T Consensus 71 ~Dv~ii~vp~~~~~~~v~ea~~~---Gi~~vVi~t~G~~~~~~~~l~~~A~~ 119 (294)
T 2yv1_A 71 ANASVIFVPAPFAKDAVFEAIDA---GIELIVVITEHIPVHDTMEFVNYAED 119 (294)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHT---TCSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred CCEEEEccCHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999988888776553 33 36667888876543445555544
No 264
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.36 E-value=0.0012 Score=65.99 Aligned_cols=105 Identities=20% Similarity=0.300 Sum_probs=68.9
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCC-C----CeEEEEeCCHH--HHHHHH--hhcCCCccCCCCCCCCceEEeCCHHhh
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKS-Q----LKVYMLMRDPA--VCQSIN--EKHCNCRYFPEQKLPENVIATTDAKTA 196 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~-~----~~V~v~~r~~~--~~~~l~--~~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (460)
..||+|+|+ |.+|.+++..|+.... + .++.++|..+. .++-+. -.+. ...+...+...++..++
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~------~~~~~~~~~~~~~~~~a 97 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDC------AFPLLDKVVVTADPRVA 97 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT------TCTTEEEEEEESCHHHH
T ss_pred CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhc------CccCCCcEEEcCChHHH
Confidence 469999996 9999999999997642 1 27999998763 222111 1111 11222345677888889
Q ss_pred cCCCcEEEEcc--chh--------------cHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 197 LLGADYCLHAM--PVQ--------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 197 ~~~aDiVilaV--p~~--------------~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
+++||+||++- |-. .++++.+.|.++..++.+|+.++|-++
T Consensus 98 ~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd 154 (345)
T 4h7p_A 98 FDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPAN 154 (345)
T ss_dssp TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred hCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcc
Confidence 99999999964 311 134444556666667887877777443
No 265
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.35 E-value=0.00073 Score=69.76 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=68.7
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhc--------CCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHH
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANK--------KSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAK 194 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~--------G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ 194 (460)
||+.+||+|||+|.||..++..|.++ |.+.+|. ++++++++.+.+.. + ...++|++
T Consensus 7 MMk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~-~--------------~~~~~d~~ 71 (444)
T 3mtj_A 7 GMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG-G--------------LPLTTNPF 71 (444)
T ss_dssp SCSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT-T--------------CCEESCTH
T ss_pred hhCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc-c--------------CcccCCHH
Confidence 55668999999999999999887642 3225554 77888876655421 1 23567888
Q ss_pred hhcC--CCcEEEEccch-hcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 195 TALL--GADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 195 ea~~--~aDiVilaVp~-~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
+.++ +.|+|++++|. ....+.+. ..++.|.-|++.-++........+.+..++
T Consensus 72 ell~d~diDvVve~tp~~~~h~~~~~---~AL~aGKhVvtenkal~a~~~~eL~~~A~~ 127 (444)
T 3mtj_A 72 DVVDDPEIDIVVELIGGLEPARELVM---QAIANGKHVVTANKHLVAKYGNEIFAAAQA 127 (444)
T ss_dssp HHHTCTTCCEEEECCCSSTTHHHHHH---HHHHTTCEEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEEcCCCchHHHHHHH---HHHHcCCEEEECCcccCHHHHHHHHHHHHH
Confidence 8776 57999999996 44444433 233457777765553332223334444433
No 266
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.34 E-value=0.00032 Score=67.88 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=65.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVil 205 (460)
.+++.|+|+|.+|.+++..|++.|. .+|++++|+.++++++.+.... ..+.+. +.++.. .++|+||-
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~-~~v~i~~R~~~~a~~la~~~~~----------~~~~~~-~~~~l~~~~~DivIn 187 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGP-SELVIANRDMAKALALRNELDH----------SRLRIS-RYEALEGQSFDIVVN 187 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHCC----------TTEEEE-CSGGGTTCCCSEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhcc----------CCeeEe-eHHHhcccCCCEEEE
Confidence 5799999999999999999999982 3899999999998888764211 012222 222322 68999999
Q ss_pred ccchhcHHHHHHHh-hhcCCCCCeEEEecc
Q 012596 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (460)
Q Consensus 206 aVp~~~~~~vl~~i-~~~l~~~~iIV~~~~ 234 (460)
++|..-..+.. .+ ...++++.+++++.-
T Consensus 188 aTp~gm~~~~~-~i~~~~l~~~~~V~DlvY 216 (272)
T 3pwz_A 188 ATSASLTADLP-PLPADVLGEAALAYELAY 216 (272)
T ss_dssp CSSGGGGTCCC-CCCGGGGTTCSEEEESSC
T ss_pred CCCCCCCCCCC-CCCHHHhCcCCEEEEeec
Confidence 99964321100 01 234667888888863
No 267
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.33 E-value=0.00055 Score=69.09 Aligned_cols=110 Identities=10% Similarity=0.108 Sum_probs=65.8
Q ss_pred chhccCCCeEEEEC-cchHHHHHHHHHHhcCCC---CeEEEEeCCHH----HHHHHH--hhcCCCccCCCCCCCCceEEe
Q 012596 121 TDILERTNKVVVLG-GGSFGTAMAAHVANKKSQ---LKVYMLMRDPA----VCQSIN--EKHCNCRYFPEQKLPENVIAT 190 (460)
Q Consensus 121 ~~~~~~~~kI~IIG-aG~mG~~~A~~La~~G~~---~~V~v~~r~~~----~~~~l~--~~g~~~~~~~~~~l~~~i~a~ 190 (460)
.+.|+..+||+|+| +|.+|.+++..|+..+.- .++.+++.+.+ +++... -.+.. ..+..++.+.
T Consensus 26 ~~~~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~------~p~~~~v~i~ 99 (375)
T 7mdh_A 26 TKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL------YPLLREVSIG 99 (375)
T ss_dssp ---CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT------CTTEEEEEEE
T ss_pred HhhCCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhh------hhhcCCcEEe
Confidence 34565678999999 799999999999987641 13766554322 222111 11111 0111345666
Q ss_pred CCHHhhcCCCcEEEEcc--ch---h-----------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 191 TDAKTALLGADYCLHAM--PV---Q-----------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 191 ~~~~ea~~~aDiVilaV--p~---~-----------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
++..+++++||+||++- |. . .+.++.+.|.++..++.+++.++|-+
T Consensus 100 ~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 100 IDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred cCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 67777899999999964 21 1 12333344556556778888888744
No 268
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.33 E-value=0.00072 Score=69.34 Aligned_cols=113 Identities=11% Similarity=0.180 Sum_probs=70.2
Q ss_pred CCeEEEECcchHHHHH--HHHHHh--cCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 127 TNKVVVLGGGSFGTAM--AAHVAN--KKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~--A~~La~--~G~-~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
+|||+|||+|.+ .+. ...|+. .+. ..+|.++|.++++++.......... ... ..+..++|..+++++||
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~---~~~--~~v~~t~d~~~al~~AD 75 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLV---KDR--FKVLISDTFEGAVVDAK 75 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHH---TTS--SEEEECSSHHHHHTTCS
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHh---hCC--eEEEEeCCHHHHhCCCC
Confidence 589999999995 222 223454 333 3689999999987654322110000 001 24666778878899999
Q ss_pred EEEEccchh------------------------------------cHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHH
Q 012596 202 YCLHAMPVQ------------------------------------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMS 245 (460)
Q Consensus 202 iVilaVp~~------------------------------------~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~ 245 (460)
+||++.-.. .+.++++.|.++. ++.++..+|-++ .+.
T Consensus 76 ~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNPvd-----i~t 148 (417)
T 1up7_A 76 YVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNPSG-----HIT 148 (417)
T ss_dssp EEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSSHH-----HHH
T ss_pred EEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCChHH-----HHH
Confidence 999988211 1345556676765 789999998543 334
Q ss_pred HHHHHHh
Q 012596 246 QIIPQAL 252 (460)
Q Consensus 246 e~l~~~l 252 (460)
+.+.+..
T Consensus 149 ~a~~k~~ 155 (417)
T 1up7_A 149 EFVRNYL 155 (417)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 5555443
No 269
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.33 E-value=0.00068 Score=70.52 Aligned_cols=90 Identities=13% Similarity=0.046 Sum_probs=68.5
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
..++++|+|+|.+|..+|..|+..| .+|+++++++...+.....+. . ..+.++++..+|+|+.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~G--A~Viv~D~~~~~a~~Aa~~g~--------------d-v~~lee~~~~aDvVi~ 326 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAG--ARVIVTEIDPICALQATMEGL--------------Q-VLTLEDVVSEADIFVT 326 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------E-ECCGGGTTTTCSEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHhCC--------------c-cCCHHHHHHhcCEEEe
Confidence 4689999999999999999999999 899999999887766655442 1 2356778889999998
Q ss_pred ccchhc-HHHHHHHhhhcCCCCCeEEEeccC
Q 012596 206 AMPVQF-SSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 206 aVp~~~-~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
+..... +. .+....++++.+|+++..+
T Consensus 327 atG~~~vl~---~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 327 TTGNKDIIM---LDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp CSSCSCSBC---HHHHTTSCTTEEEEESSST
T ss_pred CCCChhhhh---HHHHHhcCCCeEEEEcCCC
Confidence 876433 21 1234557788888888765
No 270
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.32 E-value=0.00056 Score=68.60 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=54.8
Q ss_pred CCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC--Cc
Q 012596 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--AD 201 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~--aD 201 (460)
+++||||||+|.||.. .+..|.+.. +.+|+ +++++++++ .+. + ..+.+.+|.++++++ .|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~---~~~-----~-------~~~~~~~~~~~ll~~~~vD 67 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNP-HFELYKIVERSKELS---KER-----Y-------PQASIVRSFKELTEDPEID 67 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCT-TEEEEEEECSSCCGG---GTT-----C-------TTSEEESCSHHHHTCTTCC
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCC-CeEEEEEEcCCHHHH---HHh-----C-------CCCceECCHHHHhcCCCCC
Confidence 5689999999999997 677776652 26765 788887542 111 0 124567789998875 89
Q ss_pred EEEEccchhcHHHHHHHh
Q 012596 202 YCLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i 219 (460)
+|++|+|.....+++...
T Consensus 68 ~V~i~tp~~~H~~~~~~a 85 (362)
T 3fhl_A 68 LIVVNTPDNTHYEYAGMA 85 (362)
T ss_dssp EEEECSCGGGHHHHHHHH
T ss_pred EEEEeCChHHHHHHHHHH
Confidence 999999987665554443
No 271
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.31 E-value=0.0003 Score=67.91 Aligned_cols=90 Identities=19% Similarity=0.225 Sum_probs=63.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.+++.|||+|.||.+++..|++.| .+|++++|+.++++++.+.+. .+. +.++ +.++|+||-|
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G--~~v~V~nRt~~ka~~la~~~~--------------~~~-~~~~-l~~~DiVIna 179 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG--LQVSVLNRSSRGLDFFQRLGC--------------DCF-MEPP-KSAFDLIINA 179 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCTTHHHHHHHTC--------------EEE-SSCC-SSCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHCCC--------------eEe-cHHH-hccCCEEEEc
Confidence 579999999999999999999999 899999999998888773331 111 2223 2489999999
Q ss_pred cchhcHH-HHH--HHhhhcCCCCCeEEEecc
Q 012596 207 MPVQFSS-SFL--EGISDYVDPGLPFISLSK 234 (460)
Q Consensus 207 Vp~~~~~-~vl--~~i~~~l~~~~iIV~~~~ 234 (460)
+|..-.. ..+ +.+...++++.+++++.-
T Consensus 180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 180 TSASLHNELPLNKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp CTTCCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred ccCCCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence 9963110 001 112223456789999875
No 272
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.31 E-value=0.0004 Score=67.22 Aligned_cols=150 Identities=12% Similarity=0.105 Sum_probs=83.8
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
++|||+|+|+ |.||..++..+.+.. +++|+ +++++++... +.....+-+. .+..+.+++|+++++.++|+|
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~-~~elva~~d~~~~~~~-----g~d~~~~~g~-~~~~v~~~~dl~~~l~~~DvV 76 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREGSSLL-----GSDAGELAGA-GKTGVTVQSSLDAVKDDFDVF 76 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTTCTTC-----SCCTTCSSSS-SCCSCCEESCSTTTTTSCSEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCchhhh-----hhhHHHHcCC-CcCCceecCCHHHHhcCCCEE
Confidence 4589999998 999999999887542 27777 7777653110 1110000000 012345567888888899999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~ 283 (460)
|-++......+.+.... +.|..+|..+.|+..+.. +.+.+.-.. ..++..|++...+..
T Consensus 77 IDft~p~~~~~~~~~a~---~~G~~vVigTtG~~~e~~----~~L~~~a~~----~~vv~a~N~siGvn~---------- 135 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCR---QHGKGMVIGTTGFDEAGK----QAIRDAAAD----IAIVFAANFSVGVNV---------- 135 (273)
T ss_dssp EECSCHHHHHHHHHHHH---HTTCEEEECCCCCCHHHH----HHHHHHTTT----SCEEECSCCCHHHHH----------
T ss_pred EEcCChHHHHHHHHHHH---hCCCCEEEECCCCCHHHH----HHHHHhcCC----CCEEEEecCcHHHHH----------
Confidence 95555444444443333 346667766668765432 333332111 236667765442210
Q ss_pred CCHHHHHHHHHHHhcCCceEEE
Q 012596 284 KDRKLANAVQQLLASKHLRIST 305 (460)
Q Consensus 284 ~d~~~~~~l~~lL~~~g~~v~~ 305 (460)
-.+.++.+.+.|. .++.++.
T Consensus 136 -~~~l~~~aa~~~~-~~~diei 155 (273)
T 1dih_A 136 -MLKLLEKAAKVMG-DYTDIEI 155 (273)
T ss_dssp -HHHHHHHHHHHHT-TTSEEEE
T ss_pred -HHHHHHHHHHhcC-CCCCEEE
Confidence 1245667777775 3556554
No 273
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.31 E-value=0.00045 Score=68.92 Aligned_cols=93 Identities=17% Similarity=0.114 Sum_probs=59.2
Q ss_pred CCeEEEECcchHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCC--Cc
Q 012596 127 TNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLG--AD 201 (460)
Q Consensus 127 ~~kI~IIGaG~mG~-~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~--aD 201 (460)
++||||||+|.||. ..+..|.+.. +.+|+ +++++ ..+++.+. +. .++.+++|+++++.+ .|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~--~~~~~a~~~~~-----------~~~~~~~~~~~ll~~~~~D 67 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRE-TLEVKTIFDLH--VNEKAAAPFKE-----------KGVNFTADLNELLTDPEIE 67 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCT-TEEEEEEECTT--CCHHHHHHHHT-----------TTCEEESCTHHHHSCTTCC
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCC-CeEEEEEECCC--HHHHHHHhhCC-----------CCCeEECCHHHHhcCCCCC
Confidence 47999999999999 4555565542 26765 77887 23334332 11 124567789998875 89
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
+|++|+|.....+++....+ .|..|+ +-|-+.
T Consensus 68 ~V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKP~a 99 (349)
T 3i23_A 68 LITICTPAHTHYDLAKQAIL---AGKSVI-VEKPFC 99 (349)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-ECSCSC
T ss_pred EEEEeCCcHHHHHHHHHHHH---cCCEEE-EECCCc
Confidence 99999998766555444333 354444 355444
No 274
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=97.30 E-value=0.00044 Score=68.83 Aligned_cols=36 Identities=19% Similarity=0.358 Sum_probs=31.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+..||.|||+|.+|+.++..|++.|. -+++++|++.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGV-g~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEecCCE
Confidence 35899999999999999999999996 4799998764
No 275
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.28 E-value=0.00053 Score=67.64 Aligned_cols=96 Identities=18% Similarity=0.285 Sum_probs=59.9
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHH-HHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhc---
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAV-CQSINEK-HCNCRYFPEQKLPENVIATTDAKTAL--- 197 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V-~v~~r~~~~-~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~--- 197 (460)
|++++||+|||+|.||..++..|.++..+.++ .++++++++ ...+.+. |.. ...++.++++
T Consensus 1 M~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~-------------~~~~~~e~ll~~~ 67 (312)
T 1nvm_B 1 MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVT-------------TTYAGVEGLIKLP 67 (312)
T ss_dssp CCSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCC-------------EESSHHHHHHHSG
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCC-------------cccCCHHHHHhcc
Confidence 44568999999999999999999662212454 467888765 4554432 211 1223555553
Q ss_pred --CCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 198 --LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 198 --~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
.+.|+||+|+|.....+........ ++|..+++..
T Consensus 68 ~~~~iDvV~~atp~~~h~~~a~~al~a-~~Gk~Vi~ek 104 (312)
T 1nvm_B 68 EFADIDFVFDATSASAHVQNEALLRQA-KPGIRLIDLT 104 (312)
T ss_dssp GGGGEEEEEECSCHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred CCCCCcEEEECCChHHHHHHHHHHHHh-CCCCEEEEcC
Confidence 3589999999976555544443332 1266666643
No 276
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.27 E-value=0.0026 Score=62.27 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=72.8
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--C-C
Q 012596 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--G-A 200 (460)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~-a 200 (460)
.+..+|+|+|+ |.||......|.+.| ++ .++..++.+. |. . ..++.+..+++++.+ . +
T Consensus 11 ~~~~~vvV~Gasg~~G~~~~~~l~~~g--~~-~v~~VnP~~~------g~--------~-i~G~~vy~sl~el~~~~~~~ 72 (297)
T 2yv2_A 11 DSETRVLVQGITGREGSFHAKAMLEYG--TK-VVAGVTPGKG------GS--------E-VHGVPVYDSVKEALAEHPEI 72 (297)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHHT--CE-EEEEECTTCT------TC--------E-ETTEEEESSHHHHHHHCTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhCC--Cc-EEEEeCCCCC------Cc--------e-ECCEeeeCCHHHHhhcCCCC
Confidence 34578899998 999999999999888 77 4445444210 00 0 014567788888765 5 9
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCC-eEEEeccCCccchhhhHHHHHHH
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGL-PFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~-iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
|++++++|...+.+++++..+. +. .+|.++.|+..+..+.+.+..++
T Consensus 73 DvaIi~vp~~~~~~~v~ea~~~---Gi~~vVi~t~G~~~~~~~~l~~~A~~ 120 (297)
T 2yv2_A 73 NTSIVFVPAPFAPDAVYEAVDA---GIRLVVVITEGIPVHDTMRFVNYARQ 120 (297)
T ss_dssp CEEEECCCGGGHHHHHHHHHHT---TCSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred CEEEEecCHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 9999999999998888877653 33 36667888876544455555544
No 277
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.00072 Score=70.43 Aligned_cols=79 Identities=19% Similarity=0.323 Sum_probs=55.6
Q ss_pred CCCeEEEECcchHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~-G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
++++|.|+|+|.+|.+++..|++. | ++|++++|+.++++.+.+.. ..... .+ .+.-.+++.++++++|+||
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g--~~V~v~~R~~~ka~~la~~~-~~~~~---~~--D~~d~~~l~~~l~~~DvVI 93 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDD--INVTVACRTLANAQALAKPS-GSKAI---SL--DVTDDSALDKVLADNDVVI 93 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTT--EEEEEEESSHHHHHHHHGGG-TCEEE---EC--CTTCHHHHHHHHHTSSEEE
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHhc-CCcEE---EE--ecCCHHHHHHHHcCCCEEE
Confidence 357899999999999999999998 5 79999999999888877541 11000 00 0000013445667899999
Q ss_pred EccchhcH
Q 012596 205 HAMPVQFS 212 (460)
Q Consensus 205 laVp~~~~ 212 (460)
.++|....
T Consensus 94 n~tp~~~~ 101 (467)
T 2axq_A 94 SLIPYTFH 101 (467)
T ss_dssp ECSCGGGH
T ss_pred ECCchhhh
Confidence 99997543
No 278
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.26 E-value=0.00041 Score=69.45 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=59.7
Q ss_pred ccCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
||+++||+|+| .|.+|..+.+.|.+.. ..+++.+.+..+...++.+... .+.+. ..+.+. +.++ +.++|+
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p-~~elv~v~s~~~~g~~~~~~~~---~~~g~---~~~~~~-~~~~-~~~vDv 71 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHP-YLEVKQVTSRRFAGEPVHFVHP---NLRGR---TNLKFV-PPEK-LEPADI 71 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCT-TEEEEEEBCSTTTTSBGGGTCG---GGTTT---CCCBCB-CGGG-CCCCSE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCC-CcEEEEEECchhhCchhHHhCc---hhcCc---cccccc-chhH-hcCCCE
Confidence 45568999999 6999999999999765 2477766554321111111000 01110 011111 2333 578999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
||+|+|.....+...... +.|..+|+++.-.
T Consensus 72 V~~a~g~~~s~~~a~~~~---~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 72 LVLALPHGVFAREFDRYS---ALAPVLVDLSADF 102 (345)
T ss_dssp EEECCCTTHHHHTHHHHH---TTCSEEEECSSTT
T ss_pred EEEcCCcHHHHHHHHHHH---HCCCEEEEcCccc
Confidence 999999887666554443 4578899987533
No 279
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.26 E-value=0.00032 Score=71.70 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=56.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCC-CeEEEEeCCHHHHHHHHhhcCCCccCCCCC-CCCceEEeCCHHhhcCC--CcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQ-LKVYMLMRDPAVCQSINEKHCNCRYFPEQK-LPENVIATTDAKTALLG--ADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~-~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~-l~~~i~a~~~~~ea~~~--aDi 202 (460)
|+||+|+|+|.+|..++..|++.|.- .+|++++|+.++++++.+.-... .-+... ....+.-.++.++++++ +|+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~-~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK-GYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT-TCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh-cCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 47999999999999999999998721 28999999999887776531000 000000 00000001234455555 899
Q ss_pred EEEccchhcHHHHHH
Q 012596 203 CLHAMPVQFSSSFLE 217 (460)
Q Consensus 203 VilaVp~~~~~~vl~ 217 (460)
||.+++......+++
T Consensus 80 Vin~ag~~~~~~v~~ 94 (405)
T 4ina_A 80 VLNIALPYQDLTIME 94 (405)
T ss_dssp EEECSCGGGHHHHHH
T ss_pred EEECCCcccChHHHH
Confidence 999998765444443
No 280
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.24 E-value=0.00045 Score=68.77 Aligned_cols=89 Identities=17% Similarity=0.122 Sum_probs=55.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCc-cCCCCC--C-CCceEEeCCHHhhcCCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCR-YFPEQK--L-PENVIATTDAKTALLGA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~-~~~~~~--l-~~~i~a~~~~~ea~~~a 200 (460)
|+||||+|+|.||..+++.|.+.. +.+|+ +.+++++.+..+.+. |.... .+++.. + ...+.+..++++++.++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~-~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~v 80 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQD-DMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCT-TEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCC-CCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCC
Confidence 469999999999999999998764 25654 567776666555432 31100 000000 0 00113345788877899
Q ss_pred cEEEEccchhcHHHHH
Q 012596 201 DYCLHAMPVQFSSSFL 216 (460)
Q Consensus 201 DiVilaVp~~~~~~vl 216 (460)
|+|++|+|.....+..
T Consensus 81 DvV~~aTp~~~h~~~a 96 (334)
T 2czc_A 81 DIIVDATPGGIGAKNK 96 (334)
T ss_dssp SEEEECCSTTHHHHHH
T ss_pred CEEEECCCccccHHHH
Confidence 9999999976544433
No 281
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.23 E-value=0.00038 Score=69.99 Aligned_cols=96 Identities=19% Similarity=0.232 Sum_probs=66.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEE--eCCHHhhcCCCcEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA--TTDAKTALLGADYCL 204 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a--~~~~~ea~~~aDiVi 204 (460)
..+|.|+|+|.+|...+..+...| .+|++++|++++.+.+.+.+.... .... ..+..+.+.++|+||
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G--a~V~v~dr~~~r~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG--AQVQIFDINVERLSYLETLFGSRV---------ELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHGGGS---------EEEECCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhhCcee---------EeeeCCHHHHHHHHcCCCEEE
Confidence 479999999999999999999998 799999999998888776542100 0000 013445567899999
Q ss_pred EccchhcH--HH-HHHHhhhcCCCCCeEEEec
Q 012596 205 HAMPVQFS--SS-FLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 205 laVp~~~~--~~-vl~~i~~~l~~~~iIV~~~ 233 (460)
-|++.... .. +.+...+.++++..++++.
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99964320 00 1123345567888888875
No 282
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.23 E-value=0.00045 Score=67.23 Aligned_cols=100 Identities=17% Similarity=0.208 Sum_probs=67.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeC--CHHhhcCCCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT--DAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~--~~~ea~~~aDi 202 (460)
+.+++.|+|+|.+|.+++..|++.| . +|++++|+.++++++.+.-.. .+ ++ ..+...+ ++.+.++++|+
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G--~~~v~i~~R~~~~a~~la~~~~~-~~-~~----~~i~~~~~~~l~~~l~~~Di 197 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHG--VQKLQVADLDTSRAQALADVINN-AV-GR----EAVVGVDARGIEDVIAAADG 197 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSSHHHHHHHHHHHHH-HH-TS----CCEEEECSTTHHHHHHHSSE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHh-hc-CC----ceEEEcCHHHHHHHHhcCCE
Confidence 3579999999999999999999998 6 799999999988776543100 00 00 1133333 67777789999
Q ss_pred EEEccchhcHHHHHHHh-hhcCCCCCeEEEec
Q 012596 203 CLHAMPVQFSSSFLEGI-SDYVDPGLPFISLS 233 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i-~~~l~~~~iIV~~~ 233 (460)
||-++|..-...--..+ ...++++.+++++.
T Consensus 198 VInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv 229 (283)
T 3jyo_A 198 VVNATPMGMPAHPGTAFDVSCLTKDHWVGDVV 229 (283)
T ss_dssp EEECSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred EEECCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence 99999953211100001 24566778888875
No 283
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.22 E-value=0.0019 Score=61.37 Aligned_cols=103 Identities=20% Similarity=0.227 Sum_probs=64.1
Q ss_pred CeEEEECc-chHHHHHHHHHHhc-CCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCcEE
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANK-KSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYC 203 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~-G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiV 203 (460)
|||+|+|+ |.||..++..+.+. + ++|. +++++. ++++++. ++|+|
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~--~elva~~d~~~-----------------------------dl~~~~~~~~Dvv 49 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADD--LTLSAELDAGD-----------------------------PLSLLTDGNTEVV 49 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTT--CEEEEEECTTC-----------------------------CTHHHHHTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--CEEEEEEccCC-----------------------------CHHHHhccCCcEE
Confidence 68999997 99999999998865 5 7877 444431 3344343 78999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHH
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFAL 269 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~ 269 (460)
|-++....+.+.+..... .+..+|..+.|+..+....+.+..++. . ...++..|++..
T Consensus 50 IDfT~p~a~~~~~~~a~~---~g~~~VigTTG~~~e~~~~l~~aa~~~-~----~~~vv~a~N~si 107 (245)
T 1p9l_A 50 IDFTHPDVVMGNLEFLID---NGIHAVVGTTGFTAERFQQVESWLVAK-P----NTSVLIAPNFAI 107 (245)
T ss_dssp EECSCTTTHHHHHHHHHH---TTCEEEECCCCCCHHHHHHHHHHHHTS-T----TCEEEECSCCCH
T ss_pred EEccChHHHHHHHHHHHH---cCCCEEEcCCCCCHHHHHHHHHHHHhC-C----CCCEEEECCccH
Confidence 967766666555544333 466677777788765332222222211 0 234667776543
No 284
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.22 E-value=0.00065 Score=67.37 Aligned_cols=87 Identities=18% Similarity=0.157 Sum_probs=59.0
Q ss_pred CCCeEEEECcchHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC---C
Q 012596 126 RTNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG---A 200 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~-~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~---a 200 (460)
+++||||||+|.||. ..+..|.+.. +.+|+ ++++++++ . ++...+|.++++++ .
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~-~~~lvav~d~~~~~------~--------------g~~~~~~~~~ll~~~~~v 82 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNA-NFKLVATASRHGTV------E--------------GVNSYTTIEAMLDAEPSI 82 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCT-TEEEEEEECSSCCC------T--------------TSEEESSHHHHHHHCTTC
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCC-CeEEEEEEeCChhh------c--------------CCCccCCHHHHHhCCCCC
Confidence 457999999999998 7888888753 26655 67777531 1 24466789888754 8
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
|+|++|+|.....+++....+ .|..|+ +-|-+.
T Consensus 83 D~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKP~a 115 (330)
T 4ew6_A 83 DAVSLCMPPQYRYEAAYKALV---AGKHVF-LEKPPG 115 (330)
T ss_dssp CEEEECSCHHHHHHHHHHHHH---TTCEEE-ECSSSC
T ss_pred CEEEEeCCcHHHHHHHHHHHH---cCCcEE-EeCCCC
Confidence 999999997765555444332 354444 555443
No 285
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.20 E-value=0.0009 Score=62.30 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=54.7
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcC-CCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHC-NCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~-~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
+.|+|.|.|+ |.+|..++..|++.| ++|++++|+++..+.+...+. ... ..+.. ++..+++.++|+|
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~~-~~Dl~--------~~~~~~~~~~D~v 88 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG--HEPVAMVRNEEQGPELRERGASDIV-VANLE--------EDFSHAFASIDAV 88 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHTTCSEEE-ECCTT--------SCCGGGGTTCSEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC--CeEEEEECChHHHHHHHhCCCceEE-EcccH--------HHHHHHHcCCCEE
Confidence 4689999997 999999999999999 999999999988877765443 111 01111 3556677899999
Q ss_pred EEccc
Q 012596 204 LHAMP 208 (460)
Q Consensus 204 ilaVp 208 (460)
|.+..
T Consensus 89 i~~ag 93 (236)
T 3e8x_A 89 VFAAG 93 (236)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98775
No 286
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.20 E-value=0.0006 Score=67.09 Aligned_cols=94 Identities=16% Similarity=0.096 Sum_probs=62.6
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc------
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL------ 197 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~------ 197 (460)
+|+||||||+ |.||...+..|.+.+ .+++ ++|++++.. .+.+. + ....+.++.++.+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~--~~lvav~d~~~~~~-~~~~~------~------~~~~~~~~~~~ll~~~~~l 66 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEVG--GVLVASLDPATNVG-LVDSF------F------PEAEFFTEPEAFEAYLEDL 66 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHTT--CEEEEEECSSCCCG-GGGGT------C------TTCEEESCHHHHHHHHHHH
T ss_pred CceEEEEECCChHHHHHHHHHHHhCC--CEEEEEEcCCHHHH-HHHhh------C------CCCceeCCHHHHHHHhhhh
Confidence 3689999999 789999999999876 5654 788887542 11111 1 1345667888776
Q ss_pred ----CCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCcc
Q 012596 198 ----LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (460)
Q Consensus 198 ----~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~ 238 (460)
.+.|+|++|+|.....+++....+ .|..|+ +-|-+..
T Consensus 67 ~~~~~~vD~V~I~tP~~~H~~~~~~al~---aGkhVl-~EKPla~ 107 (312)
T 3o9z_A 67 RDRGEGVDYLSIASPNHLHYPQIRMALR---LGANAL-SEKPLVL 107 (312)
T ss_dssp HHTTCCCSEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSSCS
T ss_pred cccCCCCcEEEECCCchhhHHHHHHHHH---CCCeEE-EECCCCC
Confidence 578999999998776555444333 354443 5554443
No 287
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.19 E-value=0.0011 Score=63.29 Aligned_cols=69 Identities=14% Similarity=0.150 Sum_probs=51.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
||||.|.|+|.+|+.++..|.+.| ++|++++|++...+.+...+..... .+ + ++++ +.++|+||.+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~D--~-------~d~~--~~~~d~vi~~ 70 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQG--WRIIGTSRNPDQMEAIRASGAEPLL-WP--G-------EEPS--LDGVTHLLIS 70 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGT--CEEEEEESCGGGHHHHHHTTEEEEE-SS--S-------SCCC--CTTCCEEEEC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCC--CEEEEEEcChhhhhhHhhCCCeEEE-ec--c-------cccc--cCCCCEEEEC
Confidence 589999999999999999999999 9999999998877766654321110 00 0 1222 6789999998
Q ss_pred cch
Q 012596 207 MPV 209 (460)
Q Consensus 207 Vp~ 209 (460)
...
T Consensus 71 a~~ 73 (286)
T 3ius_A 71 TAP 73 (286)
T ss_dssp CCC
T ss_pred CCc
Confidence 753
No 288
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.16 E-value=0.00067 Score=66.93 Aligned_cols=93 Identities=13% Similarity=0.060 Sum_probs=61.4
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc------
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL------ 197 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~------ 197 (460)
+|+||||||+ |.||...+..|.+.+ .+++ ++|++++.. .+.+. + ....+.+|.++.+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~--~~lvav~d~~~~~~-~~~~~------~------~~~~~~~~~~~ll~~~~~l 66 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDTG--NCLVSAYDINDSVG-IIDSI------S------PQSEFFTEFEFFLDHASNL 66 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHTT--CEEEEEECSSCCCG-GGGGT------C------TTCEEESSHHHHHHHHHHH
T ss_pred CceEEEEECCCcHHHHHHHHHHHhCC--CEEEEEEcCCHHHH-HHHhh------C------CCCcEECCHHHHHHhhhhh
Confidence 3689999999 789999999999876 6654 778887532 11111 0 1345667888765
Q ss_pred -----CCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 198 -----LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 198 -----~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
.+.|+|++|+|.....++.....+ .|..| -+-|-+.
T Consensus 67 ~~~~~~~vD~V~I~tP~~~H~~~~~~al~---aGkhV-l~EKPla 107 (318)
T 3oa2_A 67 KRDSATALDYVSICSPNYLHYPHIAAGLR---LGCDV-ICEKPLV 107 (318)
T ss_dssp TTSTTTSCCEEEECSCGGGHHHHHHHHHH---TTCEE-EECSSCC
T ss_pred hhccCCCCcEEEECCCcHHHHHHHHHHHH---CCCeE-EEECCCc
Confidence 568999999998766555444333 34443 3455443
No 289
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.15 E-value=0.0011 Score=63.26 Aligned_cols=98 Identities=16% Similarity=0.171 Sum_probs=60.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-------------------HHHHHHHhhc--CCCccCCCCCC--
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------------------AVCQSINEKH--CNCRYFPEQKL-- 183 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~-------------------~~~~~l~~~g--~~~~~~~~~~l-- 183 (460)
.++|.|||+|.+|+.++..|++.|. .+++++|++. .+++.+.+.- .+ |+..+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv-~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n----p~~~v~~ 105 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV-GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN----PHIAITP 105 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC----TTSEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC-CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC----CCcEEEE
Confidence 5799999999999999999999994 3899999987 5555443321 11 11100
Q ss_pred -CCceEEeCCHHhhcCCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEe
Q 012596 184 -PENVIATTDAKTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 184 -~~~i~a~~~~~ea~~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
+..+. ..+..+.++++|+||.++.....+..+...... .+..+|+.
T Consensus 106 ~~~~~~-~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~--~~~p~i~~ 152 (249)
T 1jw9_B 106 VNALLD-DAELAALIAEHDLVLDCTDNVAVRNQLNAGCFA--AKVPLVSG 152 (249)
T ss_dssp ECSCCC-HHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHH--HTCCEEEE
T ss_pred EeccCC-HhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHH--cCCCEEEe
Confidence 00000 012344567889999998876655555444322 23445553
No 290
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.14 E-value=0.00036 Score=64.39 Aligned_cols=75 Identities=11% Similarity=0.122 Sum_probs=50.9
Q ss_pred CeEEEEC-cchHHHHHHHHHH-hcCCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 128 NKVVVLG-GGSFGTAMAAHVA-NKKSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 128 ~kI~IIG-aG~mG~~~A~~La-~~G~~~~V~v~~r~~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
++|.|.| .|.+|..++..|+ +.| ++|++++|+++ +++.+...+.+...+.. .+.-.++..++++++|+||
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTD--MHITLYGRQLKTRIPPEIIDHERVTVIEG-----SFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCC--CEEEEEESSHHHHSCHHHHTSTTEEEEEC-----CTTCHHHHHHHHTTCSEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCC--ceEEEEecCccccchhhccCCCceEEEEC-----CCCCHHHHHHHHcCCCEEE
Confidence 3499999 5999999999999 888 99999999988 76666433222111100 0000123445678899999
Q ss_pred Eccch
Q 012596 205 HAMPV 209 (460)
Q Consensus 205 laVp~ 209 (460)
.+...
T Consensus 79 ~~ag~ 83 (221)
T 3r6d_A 79 VGAME 83 (221)
T ss_dssp ESCCC
T ss_pred EcCCC
Confidence 88764
No 291
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.13 E-value=0.00081 Score=64.97 Aligned_cols=91 Identities=16% Similarity=0.166 Sum_probs=61.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.+++.|||+|.+|.+++..|++.|. .+|++|+|+.++++++.+.-. .....+.. +.++|+||-+
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~-~~i~v~nRt~~ka~~la~~~~-------------~~~~~~~~--~~~~DivIna 182 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGF-EKLKIYARNVKTGQYLAALYG-------------YAYINSLE--NQQADILVNV 182 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTC-CCEEEECSCHHHHHHHHHHHT-------------CEEESCCT--TCCCSEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHcC-------------Cccchhhh--cccCCEEEEC
Confidence 4789999999999999999999982 379999999998888876410 01112222 4689999999
Q ss_pred cchhcHH----HHHHHh-hhcCCCCCeEEEecc
Q 012596 207 MPVQFSS----SFLEGI-SDYVDPGLPFISLSK 234 (460)
Q Consensus 207 Vp~~~~~----~vl~~i-~~~l~~~~iIV~~~~ 234 (460)
+|..-.. +.. .+ ...++++.+++++.-
T Consensus 183 Tp~gm~~~~~~~~~-~~~~~~l~~~~~v~DlvY 214 (271)
T 1npy_A 183 TSIGMKGGKEEMDL-AFPKAFIDNASVAFDVVA 214 (271)
T ss_dssp SSTTCTTSTTTTSC-SSCHHHHHHCSEEEECCC
T ss_pred CCCCccCccccCCC-CCCHHHcCCCCEEEEeec
Confidence 9964321 100 01 122334678888763
No 292
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.13 E-value=0.001 Score=67.01 Aligned_cols=89 Identities=10% Similarity=0.002 Sum_probs=61.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC-CCcEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL-GADYC 203 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiV 203 (460)
..++|+|+|+|+||..+|..|.+.| .+|+++|++++.++++.+. +. ... +.++.+. +||++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~G--akVvv~D~~~~~l~~~a~~~ga--------------~~v-~~~~ll~~~~DIv 234 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEG--AKLVVTDVNKAAVSAAVAEEGA--------------DAV-APNAIYGVTCDIF 234 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHCC--------------EEC-CGGGTTTCCCSEE
T ss_pred CcCEEEEECchHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHcCC--------------EEE-ChHHHhccCCcEe
Confidence 3589999999999999999999999 8999999999888776654 21 122 3334444 89999
Q ss_pred EEccchhcH-HHHHHHhhhcCCCCCeEEEeccCC
Q 012596 204 LHAMPVQFS-SSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 204 ilaVp~~~~-~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+.|.-...+ .+.++. + ...+|+..+|+-
T Consensus 235 ip~a~~~~I~~~~~~~----l-g~~iV~e~An~p 263 (364)
T 1leh_A 235 APCALGAVLNDFTIPQ----L-KAKVIAGSADNQ 263 (364)
T ss_dssp EECSCSCCBSTTHHHH----C-CCSEECCSCSCC
T ss_pred eccchHHHhCHHHHHh----C-CCcEEEeCCCCC
Confidence 988644332 222233 3 234666666643
No 293
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.11 E-value=0.00042 Score=71.85 Aligned_cols=79 Identities=15% Similarity=0.220 Sum_probs=53.5
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
++++|.|+|+|.+|.+++..|++.| ++|++++|+.++++.+.+........ ...+.-.++..++++++|+||.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G--~~V~v~~R~~~~a~~la~~~~~~~~~-----~~Dv~d~~~l~~~l~~~DvVIn 74 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSG--IKVTVACRTLESAKKLSAGVQHSTPI-----SLDVNDDAALDAEVAKHDLVIS 74 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTT--CEEEEEESSHHHHHHTTTTCTTEEEE-----ECCTTCHHHHHHHHTTSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCc--CEEEEEECCHHHHHHHHHhcCCceEE-----EeecCCHHHHHHHHcCCcEEEE
Confidence 4679999999999999999999988 89999999998777664421000000 0000000133466789999999
Q ss_pred ccchhc
Q 012596 206 AMPVQF 211 (460)
Q Consensus 206 aVp~~~ 211 (460)
++|...
T Consensus 75 ~a~~~~ 80 (450)
T 1ff9_A 75 LIPYTF 80 (450)
T ss_dssp CCC--C
T ss_pred CCcccc
Confidence 999643
No 294
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.05 E-value=0.0031 Score=59.05 Aligned_cols=80 Identities=16% Similarity=0.167 Sum_probs=55.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
.++|.|||+|.+|..-+..|.+.| .+|++++++.. .++.+.+.+. ..... .. -.. +-+.++|+||.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~~~l~~l~~~~~-i~~i~-----~~----~~~-~dL~~adLVIa 97 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVSAEINEWEAKGQ-LRVKR-----KK----VGE-EDLLNVFFIVV 97 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCCHHHHHHHHTTS-CEEEC-----SC----CCG-GGSSSCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCCHHHHHHHHcCC-cEEEE-----CC----CCH-hHhCCCCEEEE
Confidence 589999999999999999999999 89999987643 4555555431 11100 00 022 33688999999
Q ss_pred ccchhcHHHHHHHh
Q 012596 206 AMPVQFSSSFLEGI 219 (460)
Q Consensus 206 aVp~~~~~~vl~~i 219 (460)
++....+...+...
T Consensus 98 AT~d~~~N~~I~~~ 111 (223)
T 3dfz_A 98 ATNDQAVNKFVKQH 111 (223)
T ss_dssp CCCCTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 98877766554444
No 295
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.02 E-value=0.0051 Score=56.32 Aligned_cols=71 Identities=23% Similarity=0.299 Sum_probs=50.0
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
|||.|.|+ |.+|..++..|++.| ++|++++|+++....+...+. .++.. ++ ++...+++.++|+||.+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~--~~~~~-D~------~d~~~~~~~~~d~vi~~ 69 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG--HEVLAVVRDPQKAADRLGATV--ATLVK-EP------LVLTEADLDSVDAVVDA 69 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHTCTTS--EEEEC-CG------GGCCHHHHTTCSEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC--CEEEEEEecccccccccCCCc--eEEec-cc------ccccHhhcccCCEEEEC
Confidence 68999997 999999999999999 999999999987765533222 11100 00 01111567889999988
Q ss_pred cch
Q 012596 207 MPV 209 (460)
Q Consensus 207 Vp~ 209 (460)
...
T Consensus 70 ag~ 72 (224)
T 3h2s_A 70 LSV 72 (224)
T ss_dssp CCC
T ss_pred Ccc
Confidence 743
No 296
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.98 E-value=0.0014 Score=65.30 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=59.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCC-CCC--C-CCceEEeCCHHhhcCCCc
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFP-EQK--L-PENVIATTDAKTALLGAD 201 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~~~~-~~~--l-~~~i~a~~~~~ea~~~aD 201 (460)
+||||+|+|.||..+++.|.+.. +.+|+ +.+++.+....+... |.. .+.+ +.. + ...+.+..+.++..+++|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p-~~elvav~d~~~~~~~~~a~~~g~~-~~~~~~~~~~~~~~~v~v~~~~e~l~~~vD 79 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQP-DMKLVGVAKTSPNYEAFIAHRRGIR-IYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCT-TEEEEEEECSSCSHHHHHHHHTTCC-EECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred eEEEEEecCHHHHHHHHHHHcCC-CCEEEEEEcCChHHHHHHHHhcCcc-eecCcCHHHHhcccccccccCHhHhhcCCC
Confidence 68999999999999999998764 25655 556765544443332 321 1100 000 0 112233445666556899
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
+||.|+|.....+......+ .|..+|+.+
T Consensus 80 vV~~aTp~~~s~~~a~~~~~---aG~kvV~~s 108 (340)
T 1b7g_O 80 IVVDTTPNGVGAQYKPIYLQ---LQRNAIFQG 108 (340)
T ss_dssp EEEECCSTTHHHHHHHHHHH---TTCEEEECT
T ss_pred EEEECCCCchhHHHHHHHHH---cCCeEEEeC
Confidence 99999998766555433322 344455443
No 297
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.97 E-value=0.001 Score=64.67 Aligned_cols=91 Identities=20% Similarity=0.256 Sum_probs=62.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..+++.|+|+|.+|.+++..|.+.| . +|++++|+.++++++.+.- .....+++.+ + ++|+||
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G--~~~v~v~nRt~~ka~~La~~~-------------~~~~~~~l~~-l-~~DivI 183 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNF--AKDIYVVTRNPEKTSEIYGEF-------------KVISYDELSN-L-KGDVII 183 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTT--CSEEEEEESCHHHHHHHCTTS-------------EEEEHHHHTT-C-CCSEEE
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHhc-------------CcccHHHHHh-c-cCCEEE
Confidence 3579999999999999999999998 6 8999999999888776521 0111223444 4 899999
Q ss_pred EccchhcHHHH--HHHhhhcCCCCCeEEEec
Q 012596 205 HAMPVQFSSSF--LEGISDYVDPGLPFISLS 233 (460)
Q Consensus 205 laVp~~~~~~v--l~~i~~~l~~~~iIV~~~ 233 (460)
-++|..-.... ..--...++++.+++++.
T Consensus 184 naTp~Gm~~~~~~~pi~~~~l~~~~~v~Dlv 214 (282)
T 3fbt_A 184 NCTPKGMYPKEGESPVDKEVVAKFSSAVDLI 214 (282)
T ss_dssp ECSSTTSTTSTTCCSSCHHHHTTCSEEEESC
T ss_pred ECCccCccCCCccCCCCHHHcCCCCEEEEEe
Confidence 99986311100 000122345677888875
No 298
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.97 E-value=0.0012 Score=63.67 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=58.4
Q ss_pred CCCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~-mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..+++.|||.|. +|..+|..|.+.| ..|+++++.. .++++.++.||+||
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~g--AtVtv~~~~t----------------------------~~L~~~~~~ADIVI 198 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRN--YTVSVCHSKT----------------------------KDIGSMTRSSKIVV 198 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SCHHHHHHHSSEEE
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCC--CeEEEEeCCc----------------------------ccHHHhhccCCEEE
Confidence 468999999985 8999999999998 8999987632 26777889999999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
.+++...+ + -..++++|+++|++.
T Consensus 199 ~Avg~p~~---I--~~~~vk~GavVIDvg 222 (276)
T 3ngx_A 199 VAVGRPGF---L--NREMVTPGSVVIDVG 222 (276)
T ss_dssp ECSSCTTC---B--CGGGCCTTCEEEECC
T ss_pred ECCCCCcc---c--cHhhccCCcEEEEec
Confidence 99986432 1 135578999999975
No 299
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.96 E-value=0.00031 Score=65.40 Aligned_cols=81 Identities=11% Similarity=0.113 Sum_probs=54.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCcEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCL 204 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiVi 204 (460)
.++|+|||+|.+|..++..+.... +++++ ++|.++++.... ..+. .+...+++++.++ +.|.|+
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~---------i~gv----~V~~~~dl~ell~~~ID~Vi 145 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRP---------VRGG----VIEHVDLLPQRVPGRIEIAL 145 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCE---------ETTE----EEEEGGGHHHHSTTTCCEEE
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhh---------hcCC----eeecHHhHHHHHHcCCCEEE
Confidence 478999999999999998633222 26655 778887533210 0011 2333567888765 589999
Q ss_pred EccchhcHHHHHHHhhh
Q 012596 205 HAMPVQFSSSFLEGISD 221 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~ 221 (460)
+|+|+....++.+.+.+
T Consensus 146 IA~Ps~~~~ei~~~l~~ 162 (211)
T 2dt5_A 146 LTVPREAAQKAADLLVA 162 (211)
T ss_dssp ECSCHHHHHHHHHHHHH
T ss_pred EeCCchhHHHHHHHHHH
Confidence 99998776666666543
No 300
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.96 E-value=0.0033 Score=62.53 Aligned_cols=103 Identities=19% Similarity=0.271 Sum_probs=65.2
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCe-----EEEEeCCH--HHHHHHHh--hcCCCccCCCCCCCCceEEeCCHHhh
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLK-----VYMLMRDP--AVCQSINE--KHCNCRYFPEQKLPENVIATTDAKTA 196 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~-----V~v~~r~~--~~~~~l~~--~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (460)
.+||+|+| +|.+|..++..|+..|.-.+ +.++|+++ +.++.... .+... .+-.++..+++..++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~------~~~~~~~~~~~~~~~ 76 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL------PLLKDVIATDKEEIA 76 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC------TTEEEEEEESCHHHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh------cccCCEEEcCCcHHH
Confidence 57999999 79999999999998773124 99999974 23322111 11110 111245566777778
Q ss_pred cCCCcEEEEcc--ch--------------hcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 197 LLGADYCLHAM--PV--------------QFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 197 ~~~aDiVilaV--p~--------------~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
+++||+||++- |. ..+.++++.+.++-.++..++..+|-
T Consensus 77 ~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 77 FKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp TTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 99999999974 21 12345556666665444457777764
No 301
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.96 E-value=0.0012 Score=65.65 Aligned_cols=100 Identities=15% Similarity=0.203 Sum_probs=62.2
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCH---HHHHHHHhhcCCCccCCCCCCCCceEEeC--CHHhhcCCC
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDP---AVCQSINEKHCNCRYFPEQKLPENVIATT--DAKTALLGA 200 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~---~~~~~l~~~g~~~~~~~~~~l~~~i~a~~--~~~ea~~~a 200 (460)
|+||+|+| .|.+|..+...|.+.. +.++..+..+. ..-+.+.+.... +.+. ..+.+.+ +.++..+++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p-~~el~~l~s~~~~~saGk~~~~~~p~---~~~~---~~~~v~~~~~~~~~~~~~ 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHP-HMNITALTVSAQSNDAGKLISDLHPQ---LKGI---VELPLQPMSDISEFSPGV 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT-TEEEEEEEEETTCTTTTSBHHHHCGG---GTTT---CCCBEEEESSGGGTCTTC
T ss_pred ceEEEEECCCChHHHHHHHHHHhCC-CCcEEEEEecCchhhcCCchHHhCcc---ccCc---cceeEeccCCHHHHhcCC
Confidence 57999999 5999999999999853 26777654332 211222211100 1111 0112222 444544899
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|+||+|+|.....++...+.+ .|..+|+++.-+
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~~---~g~~vIDlSa~f 109 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFLE---AGCVVFDLSGAF 109 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHHH---TTCEEEECSSTT
T ss_pred CEEEECCChHHHHHHHHHHHH---CCCEEEEcCCcc
Confidence 999999998877776666543 588999988644
No 302
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.95 E-value=0.0058 Score=60.77 Aligned_cols=104 Identities=17% Similarity=0.145 Sum_probs=62.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEE-eC--CHHHHHHHHhhcCCCccCCCC------CCC---CceEEe--CC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYML-MR--DPAVCQSINEKHCNCRYFPEQ------KLP---ENVIAT--TD 192 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~-~r--~~~~~~~l~~~g~~~~~~~~~------~l~---~~i~a~--~~ 192 (460)
++||||+|+|++|..+++.|.+.. +.+|+.+ ++ +.+....+.+.......+++. .+. ..+.+. .|
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~-~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d 81 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSG-KVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD 81 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-SSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred ceEEEEEccCHHHHHHHHHHHcCC-CcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCC
Confidence 479999999999999999998764 3676644 43 565555554421100001110 111 122233 36
Q ss_pred HHhhc---CCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 193 AKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 193 ~~ea~---~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
+++.- .++|+||.|+|.....+... .+++.|...|.++.
T Consensus 82 ~~~l~~~~~~vDvV~eatg~~~~~e~a~---~~l~aGak~V~iSa 123 (335)
T 1u8f_O 82 PSKIKWGDAGAEYVVESTGVFTTMEKAG---AHLQGGAKRVIISA 123 (335)
T ss_dssp GGGCCTTTTTCCEEEECSSSCCSHHHHG---GGGGGTCSEEEESS
T ss_pred HHHCccccCCCCEEEECCCchhhHHHHH---HHHhCCCeEEEecc
Confidence 66641 47999999999877665543 34445666666664
No 303
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.95 E-value=0.0013 Score=69.92 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=31.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
..||.|||+|.+|+.+|..|++.|. -.++++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGV-G~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCC
Confidence 5799999999999999999999996 4799999865
No 304
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=96.94 E-value=0.0037 Score=61.49 Aligned_cols=101 Identities=13% Similarity=0.174 Sum_probs=62.5
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHH----HHhhcCCCccCCCCCCCCceEEeC-CHHhhcCC
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQS----INEKHCNCRYFPEQKLPENVIATT-DAKTALLG 199 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r--~~~~~~~----l~~~g~~~~~~~~~~l~~~i~a~~-~~~ea~~~ 199 (460)
|||+|+|+ |.+|..++..|+..|...++.++|+ ++++++. +.... ... + .+..+...+ +..+++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~---~~~-~--~~~~i~~~~d~l~~al~g 74 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL---AGT-R--SDANIYVESDENLRIIDE 74 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH---TTS-C--CCCEEEEEETTCGGGGTT
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH---Hhc-C--CCeEEEeCCcchHHHhCC
Confidence 69999999 9999999999998774346899999 7654332 22210 000 0 111233333 25677999
Q ss_pred CcEEEEccc--h---h-----------cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 200 ADYCLHAMP--V---Q-----------FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 200 aDiVilaVp--~---~-----------~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+|+||++.- . . .+.++++.+.++- +..++..+|-+
T Consensus 75 aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv 125 (313)
T 1hye_A 75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPV 125 (313)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcH
Confidence 999999752 1 1 1234445555554 56777777743
No 305
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.93 E-value=0.0018 Score=63.96 Aligned_cols=78 Identities=23% Similarity=0.315 Sum_probs=51.3
Q ss_pred ccCCCeEEEECc-chHHHHHHHHHHhcCCC-----CeEEEEeCCH--HHHHHHHh--hcCCCccCCCCCCCCceEEeCCH
Q 012596 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQ-----LKVYMLMRDP--AVCQSINE--KHCNCRYFPEQKLPENVIATTDA 193 (460)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~~A~~La~~G~~-----~~V~v~~r~~--~~~~~l~~--~g~~~~~~~~~~l~~~i~a~~~~ 193 (460)
|++.|||.|+|+ |.+|+.++..|.+.|.- ++|+++|+.+ ++.+.... .+.. ..+...+...++.
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~------~~~~~di~~~~~~ 74 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA------FPLLAGLEATDDP 74 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT------CTTEEEEEEESCH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc------ccccCCeEeccCh
Confidence 344689999997 99999999999988720 1899999874 22221110 1110 0111234555677
Q ss_pred HhhcCCCcEEEEcc
Q 012596 194 KTALLGADYCLHAM 207 (460)
Q Consensus 194 ~ea~~~aDiVilaV 207 (460)
.++++++|+||.+.
T Consensus 75 ~~a~~~~D~Vih~A 88 (327)
T 1y7t_A 75 KVAFKDADYALLVG 88 (327)
T ss_dssp HHHTTTCSEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 78889999999864
No 306
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.92 E-value=0.00061 Score=67.56 Aligned_cols=93 Identities=9% Similarity=0.055 Sum_probs=59.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCH-HHHHHHHhh----cCCCccCCCCCCCCceEEeCCHHhhcC--
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDP-AVCQSINEK----HCNCRYFPEQKLPENVIATTDAKTALL-- 198 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~-~~~~~l~~~----g~~~~~~~~~~l~~~i~a~~~~~ea~~-- 198 (460)
++||||||+|.+|...+..| ..+ .+|+ ++|+++ +..+++.+. |. ...+.+|.+++++
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~--~~lvav~d~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ll~~~ 66 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEE--CSITGIAPGVPEEDLSKLEKAISEMNI------------KPKKYNNWWEMLEKE 66 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTT--EEEEEEECSSTTCCCHHHHHHHHTTTC------------CCEECSSHHHHHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-CCC--cEEEEEecCCchhhHHHHHHHHHHcCC------------CCcccCCHHHHhcCC
Confidence 57999999999988777777 444 6766 678876 333333321 21 1245678988876
Q ss_pred CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCcc
Q 012596 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (460)
Q Consensus 199 ~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~ 238 (460)
+.|+|++|+|.....+++....+ .|..|+ +-|-+..
T Consensus 67 ~vD~V~I~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 102 (337)
T 3ip3_A 67 KPDILVINTVFSLNGKILLEALE---RKIHAF-VEKPIAT 102 (337)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHH---TTCEEE-ECSSSCS
T ss_pred CCCEEEEeCCcchHHHHHHHHHH---CCCcEE-EeCCCCC
Confidence 48999999998765554443332 344433 5565544
No 307
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.90 E-value=0.0015 Score=65.61 Aligned_cols=101 Identities=19% Similarity=0.346 Sum_probs=60.1
Q ss_pred cCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 125 ERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 125 ~~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
|+++||+|+| .|.+|..+.+.|.+.. ..+++.+....+....+...+.. +.+... ..+.+. + ++...++|+|
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p-~~elvai~~~~~~g~~~~~~~~~---~~~~v~-~dl~~~-~-~~~~~~vDvV 86 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHP-HFQVTLMTADRKAGQSMESVFPH---LRAQKL-PTLVSV-K-DADFSTVDAV 86 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCS-SEEEEEEBCSTTTTSCHHHHCGG---GTTSCC-CCCBCG-G-GCCGGGCSEE
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCC-CcEEEEEeCchhcCCCHHHhCch---hcCccc-ccceec-c-hhHhcCCCEE
Confidence 3457999999 7999999999999865 24777665443221122211100 111000 011111 1 3344689999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
|+|+|.....+..... +.|..+|+++.-.
T Consensus 87 f~atp~~~s~~~a~~~----~aG~~VId~sa~~ 115 (359)
T 1xyg_A 87 FCCLPHGTTQEIIKEL----PTALKIVDLSADF 115 (359)
T ss_dssp EECCCTTTHHHHHHTS----CTTCEEEECSSTT
T ss_pred EEcCCchhHHHHHHHH----hCCCEEEECCccc
Confidence 9999988776655443 4678899987533
No 308
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.87 E-value=0.00084 Score=67.31 Aligned_cols=160 Identities=17% Similarity=0.194 Sum_probs=84.5
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCC----CCeEEEEeCCHHHHHHHHhhcCCCccCCC-CCCCCceEEeCCHHhhcCC
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKS----QLKVYMLMRDPAVCQSINEKHCNCRYFPE-QKLPENVIATTDAKTALLG 199 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~----~~~V~v~~r~~~~~~~l~~~g~~~~~~~~-~~l~~~i~a~~~~~ea~~~ 199 (460)
+||||+|+| .|.+|..+.+.|.+++. ..+++.+.+....-+.+...+.. +.+ ..+ .+.. .+.++ +.+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~---l~~~~~~--~~~~-~~~~~-~~~ 80 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPH---LTPLAHR--VVEP-TEAAV-LGG 80 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTT---CGGGTTC--BCEE-CCHHH-HTT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccc---cccccee--eecc-CCHHH-hcC
Confidence 568999999 99999999999997640 24677665322100001110000 000 011 1111 24443 568
Q ss_pred CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECccc---HHHHhccCC
Q 012596 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSF---ALELMNKLP 276 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~---a~e~~~g~~ 276 (460)
+|+||+|++.....+++..+ +.|..+|+++.-.-.+. .+..++..|.......++.=|.. ..++. ..
T Consensus 81 ~DvVf~alg~~~s~~~~~~~----~~G~~vIDlSa~~R~~~----~~~~~~~y~~~h~~~~vyglPEv~~n~~~i~-~~- 150 (352)
T 2nqt_A 81 HDAVFLALPHGHSAVLAQQL----SPETLIIDCGADFRLTD----AAVWERFYGSSHAGSWPYGLPELPGARDQLR-GT- 150 (352)
T ss_dssp CSEEEECCTTSCCHHHHHHS----CTTSEEEECSSTTTCSC----HHHHHHHHSSCCCCCCCBSCTTSTTHHHHHT-TC-
T ss_pred CCEEEECCCCcchHHHHHHH----hCCCEEEEECCCccCCc----chhhhhhccccCCCCeeEEecccccCHHHHh-cC-
Confidence 99999999988777766555 35788999886443221 02233434432111023344444 22332 22
Q ss_pred eEEE-EccCCHHHHHHHHHHHhcCCce
Q 012596 277 TAMV-VASKDRKLANAVQQLLASKHLR 302 (460)
Q Consensus 277 ~~i~-i~~~d~~~~~~l~~lL~~~g~~ 302 (460)
..+. .++......-.+.++++..+++
T Consensus 151 ~iIanPgC~tt~~~lal~PL~~~~~i~ 177 (352)
T 2nqt_A 151 RRIAVPGCYPTAALLALFPALAADLIE 177 (352)
T ss_dssp SEEECCCHHHHHHHHHHHHHHHTTCSC
T ss_pred CEEEcCCHHHHHHHHHHHHHHHcCCCc
Confidence 2111 1122345566788888876665
No 309
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.85 E-value=0.0023 Score=62.41 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=58.5
Q ss_pred CCCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~-mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..+++.|||.|. +|..+|..|...| ..|+++++.. .++.+.++.||+||
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~hs~t----------------------------~~L~~~~~~ADIVI 213 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNN--ATVTTCHSKT----------------------------AHLDEEVNKGDILV 213 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SSHHHHHTTCSEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCC--CeEEEEECCc----------------------------ccHHHHhccCCEEE
Confidence 358999999996 7999999999988 8999987542 26777889999999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
.+++...+ + -.+++++|++||++.
T Consensus 214 ~Avg~p~~---I--~~~~vk~GavVIDVg 237 (301)
T 1a4i_A 214 VATGQPEM---V--KGEWIKPGAIVIDCG 237 (301)
T ss_dssp ECCCCTTC---B--CGGGSCTTCEEEECC
T ss_pred ECCCCccc---C--CHHHcCCCcEEEEcc
Confidence 99987542 1 134567899999986
No 310
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.85 E-value=0.0012 Score=56.03 Aligned_cols=88 Identities=14% Similarity=0.077 Sum_probs=63.4
Q ss_pred CCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 127 TNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 127 ~~kI~IIGa----G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
.++|+|||+ |.+|..+.+.|.+.| ++|+.++...+.+ .+..+..++.++-+ .|+
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g--~~V~pVnP~~~~i-------------------~G~~~y~sl~dlp~-vDl 61 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG--HEFIPVGRKKGEV-------------------LGKTIINERPVIEG-VDT 61 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT--CCEEEESSSCSEE-------------------TTEECBCSCCCCTT-CCE
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC--CeEEEECCCCCcC-------------------CCeeccCChHHCCC-CCE
Confidence 578999998 579999999999999 8888887653211 02334446666445 899
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccc
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELN 239 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~ 239 (460)
+++++|...+.++++++.+. .... |-++.|+..+
T Consensus 62 avi~~p~~~v~~~v~e~~~~-g~k~--v~~~~G~~~~ 95 (122)
T 3ff4_A 62 VTLYINPQNQLSEYNYILSL-KPKR--VIFNPGTENE 95 (122)
T ss_dssp EEECSCHHHHGGGHHHHHHH-CCSE--EEECTTCCCH
T ss_pred EEEEeCHHHHHHHHHHHHhc-CCCE--EEECCCCChH
Confidence 99999999998888887654 2222 4478888643
No 311
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.84 E-value=0.0018 Score=64.12 Aligned_cols=99 Identities=11% Similarity=0.143 Sum_probs=59.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhc-----CCCCeEE-EEeCCHH---------HH-HHHHhhcCCCccCCCCCCCCceEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANK-----KSQLKVY-MLMRDPA---------VC-QSINEKHCNCRYFPEQKLPENVIA 189 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~-----G~~~~V~-v~~r~~~---------~~-~~l~~~g~~~~~~~~~~l~~~i~a 189 (460)
+++||+|||+|.||+.++..|.+. |.+.+|+ +++++.. .. +...+.+.- +. ..
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~----~~------~~- 71 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRI----SD------RA- 71 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCS----CS------SB-
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCC----Cc------cc-
Confidence 568999999999999999999874 3224555 5566542 11 112222210 00 00
Q ss_pred eCCHHhhcC--CCcEEEEccchhcH-HHHHHHhhhcCCCCCeEEEeccCC
Q 012596 190 TTDAKTALL--GADYCLHAMPVQFS-SSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 190 ~~~~~ea~~--~aDiVilaVp~~~~-~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
. +..+.+. +.|+|+.|+|+... +...+.+...++.|.-+|+..++.
T Consensus 72 ~-d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~ 120 (325)
T 3ing_A 72 F-SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSG 120 (325)
T ss_dssp C-CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHH
T ss_pred C-CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchh
Confidence 1 3344443 58999999997533 333444555566788888876644
No 312
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.83 E-value=0.002 Score=62.24 Aligned_cols=73 Identities=25% Similarity=0.342 Sum_probs=58.0
Q ss_pred CCCeEEEECcchH-HHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 126 RTNKVVVLGGGSF-GTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~m-G~~~A~~La~~--G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
..+++.|||.|.+ |..+|..|.+. | ..|+++++.. .++.+.++.+|+
T Consensus 157 ~gk~vvVvG~s~iVG~p~A~lL~~~g~~--atVtv~h~~t----------------------------~~L~~~~~~ADI 206 (281)
T 2c2x_A 157 AGAHVVVIGRGVTVGRPLGLLLTRRSEN--ATVTLCHTGT----------------------------RDLPALTRQADI 206 (281)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHTSTTTC--CEEEEECTTC----------------------------SCHHHHHTTCSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHhcCCCC--CEEEEEECch----------------------------hHHHHHHhhCCE
Confidence 3589999999985 99999999988 6 8999987543 267777899999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
||.+++...+ + -.+++++|+++|++.
T Consensus 207 VI~Avg~p~~---I--~~~~vk~GavVIDVg 232 (281)
T 2c2x_A 207 VVAAVGVAHL---L--TADMVRPGAAVIDVG 232 (281)
T ss_dssp EEECSCCTTC---B--CGGGSCTTCEEEECC
T ss_pred EEECCCCCcc---c--CHHHcCCCcEEEEcc
Confidence 9999986542 1 134568899999875
No 313
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.82 E-value=0.0026 Score=61.61 Aligned_cols=73 Identities=25% Similarity=0.250 Sum_probs=58.0
Q ss_pred CCCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~-mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..+++.|||.|. +|.++|..|...| ..|+++.+.. .++++.++.+|+||
T Consensus 160 ~Gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~hs~t----------------------------~~L~~~~~~ADIVI 209 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKPVSQLLLNAK--ATVTTCHRFT----------------------------TDLKSHTTKADILI 209 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SSHHHHHTTCSEEE
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCC--CeEEEEeCCc----------------------------hhHHHhcccCCEEE
Confidence 358999999987 7999999999998 8999987542 25777889999999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
.+++...+ + -.+++++|+++|++.
T Consensus 210 ~Avg~p~~---I--~~~~vk~GavVIDvg 233 (285)
T 3l07_A 210 VAVGKPNF---I--TADMVKEGAVVIDVG 233 (285)
T ss_dssp ECCCCTTC---B--CGGGSCTTCEEEECC
T ss_pred ECCCCCCC---C--CHHHcCCCcEEEEec
Confidence 99985432 1 135678899999874
No 314
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.81 E-value=0.0018 Score=63.19 Aligned_cols=73 Identities=19% Similarity=0.300 Sum_probs=57.4
Q ss_pred CCCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHH--hhcCCCcE
Q 012596 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAK--TALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~-mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~--ea~~~aDi 202 (460)
..+++.|||.|. +|.++|..|.+.| ..|+++++... +++ +.++.||+
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~~~~T~----------------------------~l~l~~~~~~ADI 213 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKEN--ATVTIVHSGTS----------------------------TEDMIDYLRTADI 213 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTSC----------------------------HHHHHHHHHTCSE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CeEEEEeCCCC----------------------------CchhhhhhccCCE
Confidence 468999999887 7999999999998 89999987431 344 66789999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
||.+++...+ + -..++++|+++|++.
T Consensus 214 VI~Avg~p~~---I--~~~~vk~GavVIDvg 239 (300)
T 4a26_A 214 VIAAMGQPGY---V--KGEWIKEGAAVVDVG 239 (300)
T ss_dssp EEECSCCTTC---B--CGGGSCTTCEEEECC
T ss_pred EEECCCCCCC---C--cHHhcCCCcEEEEEe
Confidence 9999996432 1 135578999999975
No 315
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.81 E-value=0.0023 Score=61.90 Aligned_cols=73 Identities=22% Similarity=0.234 Sum_probs=58.3
Q ss_pred CCCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~-mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..+++.|||.|. +|.++|..|.+.| ..|+++++.. .++++.++.||+||
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~g--AtVtv~h~~t----------------------------~~L~~~~~~ADIVI 208 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAG--ATVSVCHIKT----------------------------KDLSLYTRQADLII 208 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SCHHHHHTTCSEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CeEEEEeCCc----------------------------hhHHHHhhcCCEEE
Confidence 468999999987 6999999999998 8999987642 25777889999999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
.+++...+ + -.+++++|+++|++.
T Consensus 209 ~Avg~p~~---I--~~~~vk~GavVIDVg 232 (285)
T 3p2o_A 209 VAAGCVNL---L--RSDMVKEGVIVVDVG 232 (285)
T ss_dssp ECSSCTTC---B--CGGGSCTTEEEEECC
T ss_pred ECCCCCCc---C--CHHHcCCCeEEEEec
Confidence 99985432 1 135678899999874
No 316
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.79 E-value=0.002 Score=63.63 Aligned_cols=98 Identities=17% Similarity=0.181 Sum_probs=64.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCC---HHHHHHHHhhcCCCccCCCCCCCCceEEe--CC---HHhh
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD---PAVCQSINEKHCNCRYFPEQKLPENVIAT--TD---AKTA 196 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~---~~~~~~l~~~g~~~~~~~~~~l~~~i~a~--~~---~~ea 196 (460)
+.+++.|+|+|.+|.+++..|++.| . +|++++|+ .++++++.+.-.. . .+..+.+. ++ +.+.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~G--a~~V~i~nR~~~~~~~a~~la~~~~~-~------~~~~~~~~~~~~~~~l~~~ 223 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDG--VKEISIFNRKDDFYANAEKTVEKINS-K------TDCKAQLFDIEDHEQLRKE 223 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTT--CSEEEEEECSSTTHHHHHHHHHHHHH-H------SSCEEEEEETTCHHHHHHH
T ss_pred cCCEEEEECCChHHHHHHHHHHHCC--CCEEEEEECCCchHHHHHHHHHHhhh-h------cCCceEEeccchHHHHHhh
Confidence 3579999999999999999999999 6 89999999 7777766543100 0 00012221 22 3455
Q ss_pred cCCCcEEEEccchhcHHH----HHHHhhhcCCCCCeEEEec
Q 012596 197 LLGADYCLHAMPVQFSSS----FLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 197 ~~~aDiVilaVp~~~~~~----vl~~i~~~l~~~~iIV~~~ 233 (460)
+.++|+||-++|..-... .+. ....++++.+++++.
T Consensus 224 l~~aDiIINaTp~Gm~~~~~~~p~~-~~~~l~~~~~V~Dlv 263 (315)
T 3tnl_A 224 IAESVIFTNATGVGMKPFEGETLLP-SADMLRPELIVSDVV 263 (315)
T ss_dssp HHTCSEEEECSSTTSTTSTTCCSCC-CGGGCCTTCEEEESC
T ss_pred hcCCCEEEECccCCCCCCCCCCCCC-cHHHcCCCCEEEEec
Confidence 678999999999532111 010 123456777888875
No 317
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.79 E-value=0.0018 Score=62.79 Aligned_cols=72 Identities=18% Similarity=0.199 Sum_probs=58.2
Q ss_pred CCCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~-mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..+++.|||.|. +|..+|..|...| ..|+++++.. .++.+.++.+|+||
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~hs~t----------------------------~~L~~~~~~ADIVI 207 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAG--CTTTVTHRFT----------------------------KNLRHHVENADLLI 207 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTT--CEEEEECSSC----------------------------SCHHHHHHHCSEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCC--CeEEEEeCCc----------------------------hhHHHHhccCCEEE
Confidence 358999999997 6999999999988 8999987543 26777788999999
Q ss_pred EccchhcHHHHHHHh-hhcCCCCCeEEEec
Q 012596 205 HAMPVQFSSSFLEGI-SDYVDPGLPFISLS 233 (460)
Q Consensus 205 laVp~~~~~~vl~~i-~~~l~~~~iIV~~~ 233 (460)
.+++...+ + .+++++|++||++.
T Consensus 208 ~Avg~p~l------I~~~~vk~GavVIDVg 231 (288)
T 1b0a_A 208 VAVGKPGF------IPGDWIKEGAIVIDVG 231 (288)
T ss_dssp ECSCCTTC------BCTTTSCTTCEEEECC
T ss_pred ECCCCcCc------CCHHHcCCCcEEEEcc
Confidence 99996542 2 24568899999975
No 318
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.79 E-value=0.00034 Score=69.61 Aligned_cols=89 Identities=25% Similarity=0.408 Sum_probs=57.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCC-------CCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKS-------QLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL 197 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~-------~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~ 197 (460)
+++||+|||+|.||..++..|.+... +.+|+ +++|+.++. ++. +. ..+++|.++.+
T Consensus 2 k~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~-----~~~----------~~-~~~~~d~~~ll 65 (332)
T 2ejw_A 2 EALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP-----RAI----------PQ-ELLRAEPFDLL 65 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC-----CSS----------CG-GGEESSCCCCT
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh-----hcc----------Cc-ccccCCHHHHh
Confidence 45799999999999999999987520 13444 667775321 111 11 12566788877
Q ss_pred CCCcEEEEccchhc-HHHHHHHhhhcCCCCCeEEEecc
Q 012596 198 LGADYCLHAMPVQF-SSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 198 ~~aDiVilaVp~~~-~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
+.|+|+.|++... ..+.+. ..++.|.-+|+..+
T Consensus 66 -~iDvVve~t~~~~~a~~~~~---~AL~aGKhVVtaNk 99 (332)
T 2ejw_A 66 -EADLVVEAMGGVEAPLRLVL---PALEAGIPLITANK 99 (332)
T ss_dssp -TCSEEEECCCCSHHHHHHHH---HHHHTTCCEEECCH
T ss_pred -CCCEEEECCCCcHHHHHHHH---HHHHcCCeEEECCc
Confidence 9999999999653 233332 23345777776544
No 319
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.79 E-value=0.0024 Score=63.86 Aligned_cols=103 Identities=17% Similarity=0.244 Sum_probs=59.5
Q ss_pred ccCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEe-CCHHHHHHHHhhcCCCccCCCCCCC---CceEEeC-CHHhhc
Q 012596 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLM-RDPAVCQSINEKHCNCRYFPEQKLP---ENVIATT-DAKTAL 197 (460)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~-r~~~~~~~l~~~g~~~~~~~~~~l~---~~i~a~~-~~~ea~ 197 (460)
|++++||+|+| .|.+|..+.+.|.+.. ..+|+.+. .+....+.+.+.+.. +.+..++ ..+.+.+ ++++ +
T Consensus 1 m~~~~kV~IiGAtG~iG~~llr~L~~~p-~~elvai~~s~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~-~ 75 (350)
T 2ep5_A 1 MADKIKVSLLGSTGMVGQKMVKMLAKHP-YLELVKVSASPSKIGKKYKDAVKW---IEQGDIPEEVQDLPIVSTNYED-H 75 (350)
T ss_dssp -CCCEEEEEESCSSHHHHHHHHHHTTCS-SEEEEEEECCGGGTTSBHHHHCCC---CSSSSCCHHHHTCBEECSSGGG-G
T ss_pred CCCCcEEEEECcCCHHHHHHHHHHHhCC-CcEEEEEecChhhcCCCHHHhcCc---ccccccccCCceeEEeeCCHHH-h
Confidence 44578999999 7999999999998754 35777664 222211112111100 0000000 0112222 4444 4
Q ss_pred CCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 198 LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 198 ~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
.++|+||+|+|.....++.....+ .|..+|+++.
T Consensus 76 ~~vDvVf~atp~~~s~~~a~~~~~---aG~~VId~s~ 109 (350)
T 2ep5_A 76 KDVDVVLSALPNELAESIELELVK---NGKIVVSNAS 109 (350)
T ss_dssp TTCSEEEECCCHHHHHHHHHHHHH---TTCEEEECSS
T ss_pred cCCCEEEECCChHHHHHHHHHHHH---CCCEEEECCc
Confidence 789999999998776666555433 4777888774
No 320
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.77 E-value=0.0017 Score=64.28 Aligned_cols=96 Identities=10% Similarity=0.057 Sum_probs=62.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh-cCCCcEEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiVil 205 (460)
.++|.|+|+|.+|..++..|.+.| + |++++++++.++ +.+.+....+ .+..- .+.+.++ ++++|.|++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g--~-v~vid~~~~~~~-~~~~~~~~i~-gd~~~------~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVRKK-VLRSGANFVH-GDPTR------VSDLEKANVRGARAVIV 183 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC--E-EEEESCGGGHHH-HHHTTCEEEE-SCTTS------HHHHHHTCSTTEEEEEE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC--c-EEEEeCChhhhh-HHhCCcEEEE-eCCCC------HHHHHhcChhhccEEEE
Confidence 468999999999999999999988 8 999999999888 7665432110 11000 0112333 678999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
+++++...-..-...+.+.++..++.-.
T Consensus 184 ~~~~d~~n~~~~~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 184 DLESDSETIHCILGIRKIDESVRIIAEA 211 (336)
T ss_dssp CCSSHHHHHHHHHHHHTTCTTSEEEEEC
T ss_pred cCCccHHHHHHHHHHHHHCCCCeEEEEE
Confidence 9997654333333344445554455433
No 321
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.74 E-value=0.0015 Score=64.54 Aligned_cols=96 Identities=17% Similarity=0.174 Sum_probs=62.3
Q ss_pred CCCeEEEECcchH-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEE--e--CCHHhhcCCC
Q 012596 126 RTNKVVVLGGGSF-GTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA--T--TDAKTALLGA 200 (460)
Q Consensus 126 ~~~kI~IIGaG~m-G~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a--~--~~~~ea~~~a 200 (460)
..+++.|||+|.| |..+|..|...| ..|++++|+..+... .. ..+... ......+ + .++.+.+.++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~g--AtVtv~nR~~~~l~~---ra---~~la~~-~~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDG--ATVYSVDVNNIQKFT---RG---ESLKLN-KHHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTS--CEEEEECSSEEEEEE---SC---CCSSCC-CCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCC--CEEEEEeCchHHHHh---HH---HHHhhh-cccccccccccHhHHHHHhccC
Confidence 3589999999976 999999999988 899999998421110 00 000000 0000001 2 5678888999
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
|+||.++..... ++ -.+++++|+++|++.-
T Consensus 247 DIVIsAtg~p~~--vI--~~e~vk~GavVIDVgi 276 (320)
T 1edz_A 247 DVVITGVPSENY--KF--PTEYIKEGAVCINFAC 276 (320)
T ss_dssp SEEEECCCCTTC--CB--CTTTSCTTEEEEECSS
T ss_pred CEEEECCCCCcc--ee--CHHHcCCCeEEEEcCC
Confidence 999999986431 00 0244678999999863
No 322
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.74 E-value=0.0042 Score=61.39 Aligned_cols=66 Identities=15% Similarity=0.098 Sum_probs=49.1
Q ss_pred CCeEEEECcchHHHH-HHHHHHhcCCCCeEEEEeCCH--HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCcE
Q 012596 127 TNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDP--AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~v~~r~~--~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDi 202 (460)
++||.|||.|.+|.+ +|..|.+.| ++|+++|+.. ...+.+.+.|.. +..-.++++.. .++|+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G--~~V~~~D~~~~~~~~~~L~~~gi~------------v~~g~~~~~l~~~~~d~ 69 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG--FEVSGCDAKMYPPMSTQLEALGID------------VYEGFDAAQLDEFKADV 69 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT--CEEEEEESSCCTTHHHHHHHTTCE------------EEESCCGGGGGSCCCSE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC--CEEEEEcCCCCcHHHHHHHhCCCE------------EECCCCHHHcCCCCCCE
Confidence 689999999999995 999999999 9999999864 345667766542 12223444543 47999
Q ss_pred EEEc
Q 012596 203 CLHA 206 (460)
Q Consensus 203 Vila 206 (460)
||++
T Consensus 70 vV~S 73 (326)
T 3eag_A 70 YVIG 73 (326)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 323
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=96.72 E-value=0.003 Score=63.93 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=70.3
Q ss_pred CeEEEECcchHH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcC-CCccCCCCC---CCCceEEeC----CHHhhcC
Q 012596 128 NKVVVLGGGSFG-TAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHC-NCRYFPEQK---LPENVIATT----DAKTALL 198 (460)
Q Consensus 128 ~kI~IIGaG~mG-~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~-~~~~~~~~~---l~~~i~a~~----~~~ea~~ 198 (460)
||+..+|+|++| +.++..|.++| ++|++.|+++..+++++++|. .....+... .-.++++.. +.-+++.
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g--~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~~i~ 78 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAG--IQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIA 78 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTT--CEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHHHHT
T ss_pred CcEEEECCCccchhhHHHHHHHcC--CeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHHHHc
Confidence 789999999999 55566778888 999999999999999998753 111111110 012333321 2333567
Q ss_pred CCcEEEEccchhcHHHHHHHhhhc--------CCCCCeEEEeccCCccc
Q 012596 199 GADYCLHAMPVQFSSSFLEGISDY--------VDPGLPFISLSKGLELN 239 (460)
Q Consensus 199 ~aDiVilaVp~~~~~~vl~~i~~~--------l~~~~iIV~~~~Gi~~~ 239 (460)
++|+|.+++.......+...|.+. ..++-.|++|-|-....
T Consensus 79 ~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~pltilsCeN~~~ng 127 (382)
T 3h2z_A 79 QVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNIIACENMVRGT 127 (382)
T ss_dssp TCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEEEECCSSTTHH
T ss_pred CCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEEEECCCccchH
Confidence 999999999876555544333221 11344588998855443
No 324
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.72 E-value=0.00032 Score=64.78 Aligned_cols=75 Identities=23% Similarity=0.363 Sum_probs=48.3
Q ss_pred ccCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
|++||||.|.| .|.+|..++..|.+.| ++|++++|+++..+.+. .+..++. ..+.-.++..++++++|+
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~---~~~~~~~-----~Dl~d~~~~~~~~~~~d~ 70 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRG--FEVTAVVRHPEKIKIEN---EHLKVKK-----ADVSSLDEVCEVCKGADA 70 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTT--CEEEEECSCGGGCCCCC---TTEEEEC-----CCTTCHHHHHHHHTTCSE
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEEcCcccchhcc---CceEEEE-----ecCCCHHHHHHHhcCCCE
Confidence 44578999999 5999999999999999 99999999975432110 0001000 000001134456778999
Q ss_pred EEEccc
Q 012596 203 CLHAMP 208 (460)
Q Consensus 203 VilaVp 208 (460)
||.+..
T Consensus 71 vi~~a~ 76 (227)
T 3dhn_A 71 VISAFN 76 (227)
T ss_dssp EEECCC
T ss_pred EEEeCc
Confidence 998764
No 325
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.72 E-value=0.0089 Score=58.61 Aligned_cols=94 Identities=16% Similarity=0.138 Sum_probs=67.5
Q ss_pred CCCeEEEE-Cc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCc
Q 012596 126 RTNKVVVL-GG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (460)
Q Consensus 126 ~~~kI~II-Ga-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (460)
...+|+|| |+ |.+|...+..|.+.| ++ .++..++.+. |. . ..++.+..+++++.+ ..|
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~G--~~-~v~~VnP~~~------g~--~-------i~G~~vy~sl~el~~~~~vD 73 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEYG--TN-LVGGTTPGKG------GK--T-------HLGLPVFNTVKEAKEQTGAT 73 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHT--CE-EEEEECTTCT------TC--E-------ETTEEEESSHHHHHHHHCCC
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHCC--Cc-EEEEeCCCcC------cc--e-------ECCeeeechHHHhhhcCCCC
Confidence 45678888 98 999999999999998 77 4455555210 10 0 013567778888877 899
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCccc
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELN 239 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~ 239 (460)
++++++|.....+++++..+. . =..+|.++.|+..+
T Consensus 74 ~avI~vP~~~~~~~~~e~i~~-G-i~~iv~~t~G~~~~ 109 (305)
T 2fp4_A 74 ASVIYVPPPFAAAAINEAIDA-E-VPLVVCITEGIPQQ 109 (305)
T ss_dssp EEEECCCHHHHHHHHHHHHHT-T-CSEEEECCCCCCHH
T ss_pred EEEEecCHHHHHHHHHHHHHC-C-CCEEEEECCCCChH
Confidence 999999999988888776552 1 13557788888654
No 326
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.69 E-value=0.0017 Score=61.81 Aligned_cols=83 Identities=8% Similarity=0.168 Sum_probs=60.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..|||+++|.|+||..+++. . + .++. +|+ +++ + + + ++.+++|+++++.++|+|+
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~--leLv~v~~---~k~------g-------e--l--gv~a~~d~d~lla~pD~VV 65 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-N--FEKIYAYD---RIS------K-------D--I--PGVVRLDEFQVPSDVSTVV 65 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-C--CSEEEEEC---SSC------C-------C--C--SSSEECSSCCCCTTCCEEE
T ss_pred ccceEEEECcCHHHHHHHhc--C-C--cEEEEEEe---ccc------c-------c--c--CceeeCCHHHHhhCCCEEE
Confidence 36999999999999999998 4 5 6664 666 211 1 1 1 2356778888888999999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
-|-....+++.+ .+.|+.|.-+|.++-|.
T Consensus 66 e~A~~~av~e~~---~~iL~aG~dvv~~S~ga 94 (253)
T 1j5p_A 66 ECASPEAVKEYS---LQILKNPVNYIIISTSA 94 (253)
T ss_dssp ECSCHHHHHHHH---HHHTTSSSEEEECCGGG
T ss_pred ECCCHHHHHHHH---HHHHHCCCCEEEcChhh
Confidence 998777666543 44466788888888775
No 327
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.67 E-value=0.0043 Score=56.51 Aligned_cols=70 Identities=14% Similarity=0.237 Sum_probs=49.2
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
|||.|.|+ |.+|..++..|++.| ++|++++|+++..+.+. .+. ..+.. + .++...+++.++|+||.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~-~~~--~~~~~-D------~~d~~~~~~~~~d~vi~~ 68 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG--HEVTAIVRNAGKITQTH-KDI--NILQK-D------IFDLTLSDLSDQNVVVDA 68 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCSHHHHHHC-SSS--EEEEC-C------GGGCCHHHHTTCSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC--CEEEEEEcCchhhhhcc-CCC--eEEec-c------ccChhhhhhcCCCEEEEC
Confidence 68999995 999999999999999 99999999987766543 221 11100 0 001111567889999988
Q ss_pred cch
Q 012596 207 MPV 209 (460)
Q Consensus 207 Vp~ 209 (460)
...
T Consensus 69 ag~ 71 (221)
T 3ew7_A 69 YGI 71 (221)
T ss_dssp CCS
T ss_pred CcC
Confidence 753
No 328
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.63 E-value=0.0021 Score=59.77 Aligned_cols=81 Identities=14% Similarity=0.183 Sum_probs=53.8
Q ss_pred CCeEEEECcchHHHHHHHHHH--hcCCCCeEE-EEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVA--NKKSQLKVY-MLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La--~~G~~~~V~-v~~r~~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (460)
..+|+|+|+|++|.+++..+. ..| +++. ++|.+++ +. |. ....+. .+.-.+++++.++ +.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g--~~iVg~~D~dp~~ki------G~--~~i~Gv----pV~~~~dL~~~v~~~~I 149 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNK--MQISMAFDLDSNDLV------GK--TTEDGI----PVYGISTINDHLIDSDI 149 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSS--EEEEEEEECTTSTTT------TC--BCTTCC----BEEEGGGHHHHC-CCSC
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCC--eEEEEEEeCCchhcc------Cc--eeECCe----EEeCHHHHHHHHHHcCC
Confidence 468999999999999999843 334 6655 7788874 32 11 001111 2333467777776 58
Q ss_pred cEEEEccchhcHHHHHHHhhh
Q 012596 201 DYCLHAMPVQFSSSFLEGISD 221 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~ 221 (460)
|.+++|+|+....++.+.+.+
T Consensus 150 d~vIIAvPs~~aq~v~d~lv~ 170 (212)
T 3keo_A 150 ETAILTVPSTEAQEVADILVK 170 (212)
T ss_dssp CEEEECSCGGGHHHHHHHHHH
T ss_pred CEEEEecCchhHHHHHHHHHH
Confidence 999999999877777766544
No 329
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.62 E-value=0.0036 Score=60.58 Aligned_cols=73 Identities=19% Similarity=0.176 Sum_probs=57.8
Q ss_pred CCCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~-mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..+++.|||.|. +|.++|..|...| ..|+++.+.. .++++.++.||+||
T Consensus 160 ~Gk~vvVvGrs~iVG~plA~lL~~~g--AtVtv~hs~T----------------------------~~L~~~~~~ADIVI 209 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPMALELLLGG--CTVTVTHRFT----------------------------RDLADHVSRADLVV 209 (286)
T ss_dssp TTCEEEEECTTSTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SCHHHHHHTCSEEE
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCC--CeEEEEeCCC----------------------------cCHHHHhccCCEEE
Confidence 468999999876 8999999999988 8999986532 25677789999999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
.+++...+ + -.+++++|++||++.
T Consensus 210 ~Avg~p~~---I--~~~~vk~GavVIDvg 233 (286)
T 4a5o_A 210 VAAGKPGL---V--KGEWIKEGAIVIDVG 233 (286)
T ss_dssp ECCCCTTC---B--CGGGSCTTCEEEECC
T ss_pred ECCCCCCC---C--CHHHcCCCeEEEEec
Confidence 99985432 1 135678999999975
No 330
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.62 E-value=0.0029 Score=62.96 Aligned_cols=103 Identities=18% Similarity=0.247 Sum_probs=58.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHh-hcCCCc-cCCCC--CC-CCceEEeCCHHhhcCCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINE-KHCNCR-YFPEQ--KL-PENVIATTDAKTALLGA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~-~g~~~~-~~~~~--~l-~~~i~a~~~~~ea~~~a 200 (460)
|+||||+|+|+||..+++.|.+.. +.+++ +.++++....+... .+.... .+++. .+ ...+.+..+.++.+.++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~-~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 79 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQD-DMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSS-SEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEeECHHHHHHHHHHHcCC-CcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCC
Confidence 469999999999999999998753 25654 45666544433332 211000 00000 00 01122223566666789
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
|+||.|+|.....+......+ .|..+|+.+
T Consensus 80 DvV~~atp~~~~~~~a~~~l~---aG~~VId~s 109 (337)
T 1cf2_P 80 DIVIDCTPEGIGAKNLKMYKE---KGIKAIFQG 109 (337)
T ss_dssp SEEEECCSTTHHHHHHHHHHH---HTCCEEECT
T ss_pred CEEEECCCchhhHHHHHHHHH---cCCEEEEec
Confidence 999999998766555544332 244555544
No 331
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.55 E-value=0.0056 Score=61.29 Aligned_cols=101 Identities=21% Similarity=0.270 Sum_probs=59.5
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHH-HHHHHHhhcCCCc--cC--CCCCCCCceEEeCCHHhhcC-C
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPA-VCQSINEKHCNCR--YF--PEQKLPENVIATTDAKTALL-G 199 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~-~~~~l~~~g~~~~--~~--~~~~l~~~i~a~~~~~ea~~-~ 199 (460)
++||+|+| .|.+|..+.+.|.+.. ..+|+.+.+++. ..+.+.+...... .+ .+..+ .+. ..++++..+ +
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p-~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~ 83 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHP-MFELTALAASERSAGKKYKDACYWFQDRDIPENIKDM--VVI-PTDPKHEEFED 83 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCS-SEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTC--BCE-ESCTTSGGGTT
T ss_pred cceEEEECcCCHHHHHHHHHHhcCC-CCEEEEEEcccccccccHHHhcccccccccccCceee--EEE-eCCHHHHhcCC
Confidence 47999999 7999999999998764 357776654321 1111211110000 00 00000 111 124555446 8
Q ss_pred CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
+|+||+|+|.....+....+.+ .|..||+++.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~~~---aG~~VId~s~ 115 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEFAK---EGKLIFSNAS 115 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHHHH---TTCEEEECCS
T ss_pred CCEEEECCCchHHHHHHHHHHH---CCCEEEECCc
Confidence 9999999998877666655543 5777898874
No 332
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.48 E-value=0.0058 Score=59.43 Aligned_cols=74 Identities=16% Similarity=0.164 Sum_probs=49.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhc--CCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANK--KSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~--G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (460)
+++||+|||+|.||...+..|.+. ..+.+++ +++++.. .+. + ++. ..|.+++++ +.
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-----a~~-----~--------g~~-~~~~~ell~~~~v 66 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-----GSL-----D--------EVR-QISLEDALRSQEI 66 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-----CEE-----T--------TEE-BCCHHHHHHCSSE
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH-----HHH-----c--------CCC-CCCHHHHhcCCCC
Confidence 468999999999999999988652 1115555 6676531 000 0 122 358888775 68
Q ss_pred cEEEEccchhcHHHHHHH
Q 012596 201 DYCLHAMPVQFSSSFLEG 218 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~ 218 (460)
|+|++++|.....++...
T Consensus 67 D~V~i~tp~~~H~~~~~~ 84 (294)
T 1lc0_A 67 DVAYICSESSSHEDYIRQ 84 (294)
T ss_dssp EEEEECSCGGGHHHHHHH
T ss_pred CEEEEeCCcHhHHHHHHH
Confidence 999999998765554433
No 333
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.48 E-value=0.0058 Score=61.63 Aligned_cols=93 Identities=20% Similarity=0.200 Sum_probs=64.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCC----HHH----H----HHHHhhcCCCccCCCCCCCCceEEeCCHH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD----PAV----C----QSINEKHCNCRYFPEQKLPENVIATTDAK 194 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~----~~~----~----~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ 194 (460)
..||.|+|+|.+|..+|+.|...|. .+|+++||+ .++ + +.+.+. .+. .....++.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~-~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~-~~~-----------~~~~~~L~ 258 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARI-TNP-----------ERLSGDLE 258 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHT-SCT-----------TCCCSCHH
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCC-CeEEEEECCCcccCCCcccccCHHHHHHHHh-hhc-----------cCchhhHH
Confidence 4799999999999999999999982 389999998 432 1 222221 110 01124789
Q ss_pred hhcCCCcEEEEccchh-cHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 195 TALLGADYCLHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 195 ea~~~aDiVilaVp~~-~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
++++++|++|-+.... ..+++++. ++++.+|+.++|-.
T Consensus 259 eav~~ADVlIG~Sap~l~t~emVk~----Ma~~pIIfalSNPt 297 (388)
T 1vl6_A 259 TALEGADFFIGVSRGNILKPEWIKK----MSRKPVIFALANPV 297 (388)
T ss_dssp HHHTTCSEEEECSCSSCSCHHHHTT----SCSSCEEEECCSSS
T ss_pred HHHccCCEEEEeCCCCccCHHHHHh----cCCCCEEEEcCCCC
Confidence 9999999998876532 24555544 45677999999843
No 334
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.43 E-value=0.005 Score=60.59 Aligned_cols=98 Identities=20% Similarity=0.225 Sum_probs=62.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCC---HHHHHHHHhhcCCCccCCCCCCCCceEEe--CCH---Hhhc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD---PAVCQSINEKHCNCRYFPEQKLPENVIAT--TDA---KTAL 197 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~---~~~~~~l~~~g~~~~~~~~~~l~~~i~a~--~~~---~ea~ 197 (460)
.+++.|+|+|.+|.+++..|++.| . +|++++|+ .++++++.++-.. . .+..+.+. .+. .+.+
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G--~~~v~v~nRt~~~~~~a~~la~~~~~-~------~~~~v~~~~~~~l~~~~~~l 218 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEG--IKEIKLFNRKDDFFEKAVAFAKRVNE-N------TDCVVTVTDLADQHAFTEAL 218 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEECSSTHHHHHHHHHHHHHH-H------SSCEEEEEETTCHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcC--CCEEEEEECCCchHHHHHHHHHHhhh-c------cCcceEEechHhhhhhHhhc
Confidence 579999999999999999999998 5 89999999 7777766542100 0 00012221 232 4456
Q ss_pred CCCcEEEEccchhcHHHHHHHh---hhcCCCCCeEEEec
Q 012596 198 LGADYCLHAMPVQFSSSFLEGI---SDYVDPGLPFISLS 233 (460)
Q Consensus 198 ~~aDiVilaVp~~~~~~vl~~i---~~~l~~~~iIV~~~ 233 (460)
.++|+||-++|..-...--..+ ...++++.+++++.
T Consensus 219 ~~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 257 (312)
T 3t4e_A 219 ASADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECV 257 (312)
T ss_dssp HHCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECC
T ss_pred cCceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEec
Confidence 7899999999964210000011 13456677777765
No 335
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.41 E-value=0.00077 Score=62.99 Aligned_cols=77 Identities=21% Similarity=0.381 Sum_probs=48.3
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
+||+|.|.| .|.+|..++..|++.| .++|++++|+++..+.+...+ ...+ ...+.-.++.+++++++|+||
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G-~~~V~~~~R~~~~~~~~~~~~--~~~~-----~~Dl~d~~~~~~~~~~~D~vv 93 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQ-TIKQTLFARQPAKIHKPYPTN--SQII-----MGDVLNHAALKQAMQGQDIVY 93 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEEEEESSGGGSCSSCCTT--EEEE-----ECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCC-CceEEEEEcChhhhcccccCC--cEEE-----EecCCCHHHHHHHhcCCCEEE
Confidence 357899999 6999999999999987 258999999986432211100 0000 000000113345677899999
Q ss_pred Eccchh
Q 012596 205 HAMPVQ 210 (460)
Q Consensus 205 laVp~~ 210 (460)
.+....
T Consensus 94 ~~a~~~ 99 (236)
T 3qvo_A 94 ANLTGE 99 (236)
T ss_dssp EECCST
T ss_pred EcCCCC
Confidence 877643
No 336
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.41 E-value=0.0037 Score=60.42 Aligned_cols=77 Identities=17% Similarity=0.243 Sum_probs=50.8
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCC-----HHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRD-----PAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~-----~~~~~~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
.+|+|.|.|+ |.+|..++..|.+.| ++|++++|+ +++.+.+... ..+...... + +.-.+++.++++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~-D----~~d~~~l~~~~~ 75 (313)
T 1qyd_A 3 KKSRVLIVGGTGYIGKRIVNASISLG--HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA-S----LDDHQRLVDALK 75 (313)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECC-C----SSCHHHHHHHHT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhCC--CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeC-C----CCCHHHHHHHHh
Confidence 3689999995 999999999999999 999999998 4444433221 111111100 0 110123556778
Q ss_pred CCcEEEEccch
Q 012596 199 GADYCLHAMPV 209 (460)
Q Consensus 199 ~aDiVilaVp~ 209 (460)
++|+||.+...
T Consensus 76 ~~d~vi~~a~~ 86 (313)
T 1qyd_A 76 QVDVVISALAG 86 (313)
T ss_dssp TCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 99999998763
No 337
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.37 E-value=0.0061 Score=60.41 Aligned_cols=97 Identities=16% Similarity=0.226 Sum_probs=59.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhc-------CCCCeEE-EEeCCHHHH------HHHHhhcCCCccCCCCCCCCceEEe--
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANK-------KSQLKVY-MLMRDPAVC------QSINEKHCNCRYFPEQKLPENVIAT-- 190 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~-------G~~~~V~-v~~r~~~~~------~~l~~~g~~~~~~~~~~l~~~i~a~-- 190 (460)
|+||+|||+|.||..++..|.+. |.+.+|+ +++++.... +.+.+.... ...+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~------------~~~~~~ 69 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRET------------GMLRDD 69 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHH------------SSCSBC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccC------------ccccCC
Confidence 57999999999999999999875 1235655 566664321 111111000 0112
Q ss_pred CCHHhhcC--CCcEEEEccchhcH-HHHHHHhhhcCCCCCeEEEeccC
Q 012596 191 TDAKTALL--GADYCLHAMPVQFS-SSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 191 ~~~~ea~~--~aDiVilaVp~~~~-~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
.|.++.++ +.|+|+.|+|+... .+..+.+...++.|..+|+..++
T Consensus 70 ~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKk 117 (327)
T 3do5_A 70 AKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKG 117 (327)
T ss_dssp CCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSH
T ss_pred CCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCch
Confidence 26777664 68999999997642 11334455566678888876553
No 338
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=96.33 E-value=0.0028 Score=63.21 Aligned_cols=95 Identities=19% Similarity=0.269 Sum_probs=55.4
Q ss_pred ccCCCeEEEEC-cchHHHHHHHHHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEe-CCHHhhcCCC
Q 012596 124 LERTNKVVVLG-GGSFGTAMAAHVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT-TDAKTALLGA 200 (460)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~~A~~La~~G~-~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~-~~~~ea~~~a 200 (460)
|+++|||+|+| .|.+|..+.+.|.++++ ..+++.+..... .|.... +.+. .+.+. .++++ +.++
T Consensus 3 M~m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~-------~g~~~~-~~g~----~i~~~~~~~~~-~~~~ 69 (340)
T 2hjs_A 3 MSQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES-------AGQRMG-FAES----SLRVGDVDSFD-FSSV 69 (340)
T ss_dssp --CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT-------TTCEEE-ETTE----EEECEEGGGCC-GGGC
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCC-------CCCccc-cCCc----ceEEecCCHHH-hcCC
Confidence 33357999999 79999999999986652 235565542210 111000 1111 11111 12322 5689
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
|+||+|+|.....+......+ .|..+|+++.
T Consensus 70 DvV~~a~g~~~s~~~a~~~~~---aG~kvId~Sa 100 (340)
T 2hjs_A 70 GLAFFAAAAEVSRAHAERARA---AGCSVIDLSG 100 (340)
T ss_dssp SEEEECSCHHHHHHHHHHHHH---TTCEEEETTC
T ss_pred CEEEEcCCcHHHHHHHHHHHH---CCCEEEEeCC
Confidence 999999998776665555433 4677787764
No 339
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.30 E-value=0.0047 Score=65.66 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=30.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~ 161 (460)
..||.|||+|.+|+.+|..|++.|. -+++++|.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGV-G~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC-CEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 5799999999999999999999996 479999866
No 340
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.29 E-value=0.0081 Score=59.58 Aligned_cols=99 Identities=14% Similarity=0.160 Sum_probs=58.2
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhc------CCCCeEE-EEeCCHHHHHH------HHhhcCCCccCCCCCCCCce-EE
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANK------KSQLKVY-MLMRDPAVCQS------INEKHCNCRYFPEQKLPENV-IA 189 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~------G~~~~V~-v~~r~~~~~~~------l~~~g~~~~~~~~~~l~~~i-~a 189 (460)
||+++||+|||+|.||..++..|.+. |.+.+|+ +++++.++.+. +.+.... ..+ .+
T Consensus 3 mM~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 72 (331)
T 3c8m_A 3 AMKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEK----------GSLDSL 72 (331)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHT----------TCGGGC
T ss_pred CCcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhcc----------CCcccc
Confidence 44568999999999999999999764 2114554 66777643221 1110000 001 12
Q ss_pred eC---CHHhhc-CCCcEEEEccchh----cHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 190 TT---DAKTAL-LGADYCLHAMPVQ----FSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 190 ~~---~~~ea~-~~aDiVilaVp~~----~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
++ |+++++ .+.|+|+.|+|.. ...+. +...+..|.-||+..+.
T Consensus 73 ~~~~~d~~~ll~~~iDvVv~~t~~~~~~~~~~~~---~~~AL~aGkhVvtanK~ 123 (331)
T 3c8m_A 73 EYESISASEALARDFDIVVDATPASADGKKELAF---YKETFENGKDVVTANKS 123 (331)
T ss_dssp CSEECCHHHHHHSSCSEEEECSCCCSSSHHHHHH---HHHHHHTTCEEEECCCH
T ss_pred cCCCCCHHHHhCCCCCEEEECCCCCCccchHHHH---HHHHHHCCCeEEecCch
Confidence 23 677765 4689999999985 22222 33344567777776553
No 341
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.29 E-value=0.0012 Score=59.60 Aligned_cols=36 Identities=25% Similarity=0.463 Sum_probs=32.9
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHH
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAV 164 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~ 164 (460)
.|+|.|.|+ |.+|..++..|.+.| ++|++++|+++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~ 39 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG--YEVTVLVRDSSR 39 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCGGG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeChhh
Confidence 379999998 999999999999999 999999998753
No 342
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.29 E-value=0.003 Score=60.86 Aligned_cols=86 Identities=12% Similarity=0.234 Sum_probs=54.8
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCC------HHHHHHHH---hhcCCCccCCCCCCCCceEEeCCHHh
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRD------PAVCQSIN---EKHCNCRYFPEQKLPENVIATTDAKT 195 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~------~~~~~~l~---~~g~~~~~~~~~~l~~~i~a~~~~~e 195 (460)
.+|+|.|.|+ |.+|..++..|.+.| ++|++++|+ +++.+.+. ..+. ..... ++ .-.+++.+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v--~~v~~-D~----~d~~~l~~ 73 (308)
T 1qyc_A 3 SRSRILLIGATGYIGRHVAKASLDLG--HPTFLLVRESTASSNSEKAQLLESFKASGA--NIVHG-SI----DDHASLVE 73 (308)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCCCCTTTTHHHHHHHHHHHTTTC--EEECC-CT----TCHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhCC--CCEEEEECCcccccCHHHHHHHHHHHhCCC--EEEEe-cc----CCHHHHHH
Confidence 3689999996 999999999999999 899999997 33333232 2222 11100 01 00123456
Q ss_pred hcCCCcEEEEccchh---cHHHHHHHhh
Q 012596 196 ALLGADYCLHAMPVQ---FSSSFLEGIS 220 (460)
Q Consensus 196 a~~~aDiVilaVp~~---~~~~vl~~i~ 220 (460)
+++++|+||.+.... ....+++...
T Consensus 74 ~~~~~d~vi~~a~~~~~~~~~~l~~aa~ 101 (308)
T 1qyc_A 74 AVKNVDVVISTVGSLQIESQVNIIKAIK 101 (308)
T ss_dssp HHHTCSEEEECCCGGGSGGGHHHHHHHH
T ss_pred HHcCCCEEEECCcchhhhhHHHHHHHHH
Confidence 677899999988743 2344554443
No 343
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.29 E-value=0.0028 Score=60.37 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=30.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
..+|.|||+|.+|+.++..|++.|. ..++++|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gv-g~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGV-GTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC-SEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCC-CeEEEEeCCC
Confidence 5799999999999999999999995 3789998763
No 344
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.28 E-value=0.016 Score=57.72 Aligned_cols=102 Identities=17% Similarity=0.185 Sum_probs=58.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCc-cC--C-CC-CC-CCceEEeCCHHhhcC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCR-YF--P-EQ-KL-PENVIATTDAKTALL 198 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~-g~~~~-~~--~-~~-~l-~~~i~a~~~~~ea~~ 198 (460)
|+||||+|+|++|..+++.|.+.. +.+|+ +.+++++....+.+. |.... .+ + .. .+ ...+.+..+..+...
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~-~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~ 80 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQD-DMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIE 80 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSS-SEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCC-CceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhcc
Confidence 469999999999999999998763 25655 445555544444332 11100 00 0 00 00 011222234555557
Q ss_pred CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEE
Q 012596 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFIS 231 (460)
Q Consensus 199 ~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~ 231 (460)
++|+|+.|++.....+..+ ..+++.|..+|+
T Consensus 81 ~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~ 111 (343)
T 2yyy_A 81 DADIVVDGAPKKIGKQNLE--NIYKPHKVKAIL 111 (343)
T ss_dssp GCSEEEECCCTTHHHHHHH--HTTTTTTCEEEE
T ss_pred CCCEEEECCCccccHHHHH--HHHHHCCCEEEE
Confidence 8999999999876554443 345566766554
No 345
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.28 E-value=0.014 Score=58.04 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=57.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEe-C--CHHHHHHHHhhc-CCCccC-------CCCCCC---CceEEe--
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLM-R--DPAVCQSINEKH-CNCRYF-------PEQKLP---ENVIAT-- 190 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~-r--~~~~~~~l~~~g-~~~~~~-------~~~~l~---~~i~a~-- 190 (460)
++||||+|+|++|..+.+.|.+.. +.+|+.++ + +.+....+.+.. ....+. .+..+. ..+.+.
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~p-~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~ 81 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQSE-DVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCS-SEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECC
T ss_pred ceEEEEECcCHHHHHHHHHHhCCC-CeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEec
Confidence 369999999999999999998763 25666444 2 344444443211 000000 011110 122323
Q ss_pred CCHHhhc---CCCcEEEEccchhcHHHHHHHhhhcCCCCC--eEEEec
Q 012596 191 TDAKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (460)
Q Consensus 191 ~~~~ea~---~~aDiVilaVp~~~~~~vl~~i~~~l~~~~--iIV~~~ 233 (460)
.|+++.- .++|+||.|+|.....+...... +.|. +||+..
T Consensus 82 ~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l---~aGak~VVIs~p 126 (337)
T 3e5r_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHL---KGGAKKVVISAP 126 (337)
T ss_dssp SCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHH---HTTCSEEEESSC
T ss_pred CChHHccccccCCCEEEECCCchhhHHHHHHHH---HcCCCEEEEecC
Confidence 2666531 47999999999876655544332 2344 666553
No 346
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=96.27 E-value=0.0033 Score=63.11 Aligned_cols=105 Identities=24% Similarity=0.280 Sum_probs=59.9
Q ss_pred ccCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCC-C-ccCC-CCCCCCceEEeCCHHhhcCC
Q 012596 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCN-C-RYFP-EQKLPENVIATTDAKTALLG 199 (460)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~-~-~~~~-~~~l~~~i~a~~~~~ea~~~ 199 (460)
|++++||+||| .|..|.-+.+.|.+.. ..++..+......-+.+.+.... . ..++ +.. ...+.. .+.++ +.+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP-~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~-~~~v~~-~~~~~-~~~ 79 (359)
T 4dpl_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHP-YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIA-DMEIKP-TDPKL-MDD 79 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCS-SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHH-TCBCEE-CCGGG-CTT
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCC-CceEEEEECchhcCCChhHhcccccccccccccc-cceEEe-CCHHH-hcC
Confidence 44567999999 6999999999888653 24666554332211112211000 0 0000 000 001121 23333 579
Q ss_pred CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
+|+||+|+|.....++...+.+ .|..+|+++.-
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~---~G~~vIDlSa~ 112 (359)
T 4dpl_A 80 VDIIFSPLPQGAAGPVEEQFAK---EGFPVISNSPD 112 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHH---TTCEEEECSST
T ss_pred CCEEEECCChHHHHHHHHHHHH---CCCEEEEcCCC
Confidence 9999999998887776665543 58899998853
No 347
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=96.27 E-value=0.0033 Score=63.11 Aligned_cols=105 Identities=24% Similarity=0.280 Sum_probs=59.9
Q ss_pred ccCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCC-C-ccCC-CCCCCCceEEeCCHHhhcCC
Q 012596 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCN-C-RYFP-EQKLPENVIATTDAKTALLG 199 (460)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~-~-~~~~-~~~l~~~i~a~~~~~ea~~~ 199 (460)
|++++||+||| .|..|.-+.+.|.+.. ..++..+......-+.+.+.... . ..++ +.. ...+.. .+.++ +.+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP-~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~-~~~v~~-~~~~~-~~~ 79 (359)
T 4dpk_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHP-YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIA-DMEIKP-TDPKL-MDD 79 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCS-SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHH-TCBCEE-CCGGG-CTT
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCC-CceEEEEECchhcCCChhHhcccccccccccccc-cceEEe-CCHHH-hcC
Confidence 44567999999 6999999999888653 24666554332211112211000 0 0000 000 001121 23333 579
Q ss_pred CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
+|+||+|+|.....++...+.+ .|..+|+++.-
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~---~G~~vIDlSa~ 112 (359)
T 4dpk_A 80 VDIIFSPLPQGAAGPVEEQFAK---EGFPVISNSPD 112 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHH---TTCEEEECSST
T ss_pred CCEEEECCChHHHHHHHHHHHH---CCCEEEEcCCC
Confidence 9999999998887776665543 58899998853
No 348
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.14 E-value=0.0076 Score=58.33 Aligned_cols=101 Identities=16% Similarity=0.289 Sum_probs=64.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+.+++.|+|+|.+|.+++..|++.| +|++++|+.++++.+.+.-.. .. .......+.+. +..+.+.++|+||.
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G---~V~v~~r~~~~~~~l~~~~~~-~~--~~~~~~~~d~~-~~~~~~~~~DilVn 199 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN---NIIIANRTVEKAEALAKEIAE-KL--NKKFGEEVKFS-GLDVDLDGVDIIIN 199 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS---EEEEECSSHHHHHHHHHHHHH-HH--TCCHHHHEEEE-CTTCCCTTCCEEEE
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC---CEEEEECCHHHHHHHHHHHhh-hc--ccccceeEEEe-eHHHhhCCCCEEEE
Confidence 3578999999999999999999886 899999998877766543100 00 00000012222 23455678999999
Q ss_pred ccchhcHHH---H-HHHhhhcCCCCCeEEEecc
Q 012596 206 AMPVQFSSS---F-LEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 206 aVp~~~~~~---v-l~~i~~~l~~~~iIV~~~~ 234 (460)
+++...... . + .-...++++.+++++.-
T Consensus 200 ~ag~~~~~~~~~~~~-~~~~~l~~~~~v~Dv~y 231 (287)
T 1nvt_A 200 ATPIGMYPNIDVEPI-VKAEKLREDMVVMDLIY 231 (287)
T ss_dssp CSCTTCTTCCSSCCS-SCSTTCCSSSEEEECCC
T ss_pred CCCCCCCCCCCCCCC-CCHHHcCCCCEEEEeee
Confidence 998543210 0 1 01234667888888763
No 349
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.06 E-value=0.0044 Score=61.66 Aligned_cols=93 Identities=14% Similarity=0.247 Sum_probs=57.4
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeC-CHHhhcCCCcE
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT-DAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~-~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~-~~~ea~~~aDi 202 (460)
+++||+|+| .|.+|..+.+.|.++++ ..+++.+..... .|.... +.+ ..+.+.+ ++ +...++|+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~-------~G~~~~-~~~----~~i~~~~~~~-~~~~~vDv 68 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERS-------EGKTYR-FNG----KTVRVQNVEE-FDWSQVHI 68 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT-------TTCEEE-ETT----EEEEEEEGGG-CCGGGCSE
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCC-------CCCcee-ecC----ceeEEecCCh-HHhcCCCE
Confidence 468999999 99999999999988731 256666653211 111100 111 1122221 22 23468999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
||+|+|.....+...... +.|..+|+++.
T Consensus 69 Vf~a~g~~~s~~~a~~~~---~~G~~vId~s~ 97 (336)
T 2r00_A 69 ALFSAGGELSAKWAPIAA---EAGVVVIDNTS 97 (336)
T ss_dssp EEECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred EEECCCchHHHHHHHHHH---HcCCEEEEcCC
Confidence 999999877666555443 35778888764
No 350
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.01 E-value=0.0083 Score=62.12 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=61.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCC-----HHhhcC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD-----AKTALL 198 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~---~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~-----~~ea~~ 198 (460)
.+||.|||+|.||+.++..|+++. +. +|++.|.+....+.....|.... .+.++.+ +..+++
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~-dv~~~~I~vaD~~~~~~~~~~~~g~~~~---------~~~Vdadnv~~~l~aLl~ 82 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKF-DIKPSQVTIIAAEGTKVDVAQQYGVSFK---------LQQITPQNYLEVIGSTLE 82 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHB-CCCGGGEEEEESSCCSCCHHHHHTCEEE---------ECCCCTTTHHHHTGGGCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC-CCceeEEEEeccchhhhhHHhhcCCcee---------EEeccchhHHHHHHHHhc
Confidence 579999999999999999999875 23 68888876543222222232110 0112122 234556
Q ss_pred CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 199 ~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
+.|+||-+.+......+++...+ .|.-.+++.+
T Consensus 83 ~~DvVIN~s~~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 83 ENDFLIDVSIGISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp TTCEEEECCSSSCHHHHHHHHHH---HTCEEEESSC
T ss_pred CCCEEEECCccccCHHHHHHHHH---cCCCEEECCC
Confidence 67999998887776666655443 3677888775
No 351
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.97 E-value=0.012 Score=60.64 Aligned_cols=66 Identities=26% Similarity=0.227 Sum_probs=48.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC-Cc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG-AD 201 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~----~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~-aD 201 (460)
.+||.|||+|..|.+.|..|.+.| ++|+++|++. ...+.+.+.|.. +..-.++++.+.+ +|
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G--~~V~~~D~~~~~~~~~~~~L~~~gi~------------~~~g~~~~~~~~~~~d 74 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLG--AIVTVNDGKPFDENPTAQSLLEEGIK------------VVCGSHPLELLDEDFC 74 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTT--CEEEEEESSCGGGCHHHHHHHHTTCE------------EEESCCCGGGGGSCEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEeCCcccCChHHHHHHhCCCE------------EEECCChHHhhcCCCC
Confidence 579999999999999999999999 9999999854 245666666542 1111233344455 89
Q ss_pred EEEEc
Q 012596 202 YCLHA 206 (460)
Q Consensus 202 iVila 206 (460)
+||++
T Consensus 75 ~vv~s 79 (451)
T 3lk7_A 75 YMIKN 79 (451)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 352
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=95.95 E-value=0.0093 Score=60.28 Aligned_cols=102 Identities=17% Similarity=0.290 Sum_probs=59.0
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEE-eCCHHHHHHHHhhcCCCccCCCCCCC-----CceEEeCCHHhhcC
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYML-MRDPAVCQSINEKHCNCRYFPEQKLP-----ENVIATTDAKTALL 198 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~-~r~~~~~~~l~~~g~~~~~~~~~~l~-----~~i~a~~~~~ea~~ 198 (460)
+++||+||| .|..|.-|.+.|.+.. ..++..+ ...+..-+.+.+... .+.+..+| ..+... +..+.+.
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp-~~el~~l~aS~~saGk~~~~~~~---~~~~~~~p~~~~~~~v~~~-~~~~~~~ 92 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHP-EFEIHALGASSRSAGKKYKDAAS---WKQTETLPETEQDIVVQEC-KPEGNFL 92 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS-SEEEEEEEECTTTTTSBHHHHCC---CCCSSCCCHHHHTCBCEES-SSCTTGG
T ss_pred CccEEEEECCCChHHHHHHHHHHcCC-CceEEEeeccccccCCCHHHhcc---cccccccccccccceEEeC-chhhhcc
Confidence 457999999 6999999999998753 2466533 322211111111100 00000011 012222 2221357
Q ss_pred CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 199 ~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
++|+||+|+|.....++...+.+ .|..+|+++.-
T Consensus 93 ~~Dvvf~alp~~~s~~~~~~~~~---~G~~VIDlSa~ 126 (381)
T 3hsk_A 93 ECDVVFSGLDADVAGDIEKSFVE---AGLAVVSNAKN 126 (381)
T ss_dssp GCSEEEECCCHHHHHHHHHHHHH---TTCEEEECCST
T ss_pred cCCEEEECCChhHHHHHHHHHHh---CCCEEEEcCCc
Confidence 89999999998887777666543 57889998753
No 353
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.89 E-value=0.0077 Score=60.57 Aligned_cols=93 Identities=19% Similarity=0.242 Sum_probs=58.3
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEe-CCHHhhcCCCcEE
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT-TDAKTALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~-~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~-~~~~ea~~~aDiV 203 (460)
++||+||| .|..|.-+.+.|.+.++ ..++.++.... ..|.... +.+. .+.+. .+. +.+.++|+|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~-------saG~~~~-~~~~----~~~~~~~~~-~~~~~~Dvv 68 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASAR-------SAGKSLK-FKDQ----DITIEETTE-TAFEGVDIA 68 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTT-------TTTCEEE-ETTE----EEEEEECCT-TTTTTCSEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccc-------cCCCcce-ecCC----CceEeeCCH-HHhcCCCEE
Confidence 47999999 89999999999998752 12445554322 1122111 1111 12222 122 335789999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
|+|+|.....+....+.+ .|..+|+++.-
T Consensus 69 f~a~~~~~s~~~a~~~~~---~G~~vIDlSa~ 97 (366)
T 3pwk_A 69 LFSAGSSTSAKYAPYAVK---AGVVVVDNTSY 97 (366)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCEEEECSST
T ss_pred EECCChHhHHHHHHHHHH---CCCEEEEcCCc
Confidence 999998777766655543 57889998854
No 354
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.86 E-value=0.026 Score=54.86 Aligned_cols=75 Identities=13% Similarity=0.126 Sum_probs=50.8
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-----cCCCccC--CCCCCCCceEEeCCHHhhc
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-----HCNCRYF--PEQKLPENVIATTDAKTAL 197 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~-----g~~~~~~--~~~~l~~~i~a~~~~~ea~ 197 (460)
+.|+|.|.|+ |.+|+.++..|++.| ++|++++|+.+..+.+.+. +.+..++ .+..- ..+..+++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d------~~~~~~~~ 81 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHG--YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK------QGAYDEVI 81 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS------TTTTTTTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC------hHHHHHHH
Confidence 4589999997 999999999999999 9999999998765544331 1111111 11110 12344556
Q ss_pred CCCcEEEEccc
Q 012596 198 LGADYCLHAMP 208 (460)
Q Consensus 198 ~~aDiVilaVp 208 (460)
+++|+||.+..
T Consensus 82 ~~~d~vih~A~ 92 (342)
T 1y1p_A 82 KGAAGVAHIAS 92 (342)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEEeCC
Confidence 68999998763
No 355
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=95.84 E-value=0.0056 Score=58.53 Aligned_cols=73 Identities=11% Similarity=0.116 Sum_probs=49.2
Q ss_pred CeEEEECc-chHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~-G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
|||.|.|+ |.+|..++..|.+. | ++|++.+|+++....+...+. .... ..+.-.++..++++++|+||.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g--~~V~~~~R~~~~~~~~~~~~v--~~~~-----~D~~d~~~l~~~~~~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI--DHFHIGVRNVEKVPDDWRGKV--SVRQ-----LDYFNQESMVEAFKGMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC--TTEEEEESSGGGSCGGGBTTB--EEEE-----CCTTCHHHHHHHTTTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC--CcEEEEECCHHHHHHhhhCCC--EEEE-----cCCCCHHHHHHHHhCCCEEEE
Confidence 68999995 99999999999987 7 899999999865443322221 1000 000001234567889999999
Q ss_pred ccch
Q 012596 206 AMPV 209 (460)
Q Consensus 206 aVp~ 209 (460)
+...
T Consensus 72 ~a~~ 75 (289)
T 3e48_A 72 IPSI 75 (289)
T ss_dssp CCCC
T ss_pred eCCC
Confidence 8753
No 356
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.83 E-value=0.0068 Score=59.75 Aligned_cols=87 Identities=13% Similarity=0.182 Sum_probs=55.1
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHH---HhhcCCCccCCCCCCCCceEEeCCHHhhc
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSI---NEKHCNCRYFPEQKLPENVIATTDAKTAL 197 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~----~~~~~l---~~~g~~~~~~~~~~l~~~i~a~~~~~ea~ 197 (460)
.+|+|.|.|+ |.+|..++..|.+.| ++|++++|++ ++.+.+ ...+.. .+.. ++ .-.+++.+++
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~l~~~~v~--~~~~-Dl----~d~~~l~~~~ 79 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKAKIFKALEDKGAI--IVYG-LI----NEQEAMEKIL 79 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHHHHHHTTCE--EEEC-CT----TCHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHHHHHHHHHhCCcE--EEEe-ec----CCHHHHHHHH
Confidence 3579999998 999999999999999 9999999976 444433 222221 1100 00 0012345566
Q ss_pred C--CCcEEEEccchh---cHHHHHHHhhh
Q 012596 198 L--GADYCLHAMPVQ---FSSSFLEGISD 221 (460)
Q Consensus 198 ~--~aDiVilaVp~~---~~~~vl~~i~~ 221 (460)
+ ++|+||.+.... ....+++....
T Consensus 80 ~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 80 KEHEIDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp HHTTCCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred hhCCCCEEEECCchhhHHHHHHHHHHHHH
Confidence 7 899999988753 23445554443
No 357
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.82 E-value=0.0038 Score=61.00 Aligned_cols=74 Identities=18% Similarity=0.193 Sum_probs=47.8
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
++|||.|.|+ |.+|..++..|++.| ++|++++|++...+.+...+. .++. ..+.-.++..++++++|+||
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~--~~~~-----~Dl~d~~~~~~~~~~~d~vi 82 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAG--HDLVLIHRPSSQIQRLAYLEP--ECRV-----AEMLDHAGLERALRGLDGVI 82 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECTTSCGGGGGGGCC--EEEE-----CCTTCHHHHHHHTTTCSEEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEecChHhhhhhccCCe--EEEE-----ecCCCHHHHHHHHcCCCEEE
Confidence 3579999995 999999999999999 999999998754433322111 1100 00000113446678899999
Q ss_pred Eccc
Q 012596 205 HAMP 208 (460)
Q Consensus 205 laVp 208 (460)
.+..
T Consensus 83 h~a~ 86 (342)
T 2x4g_A 83 FSAG 86 (342)
T ss_dssp EC--
T ss_pred ECCc
Confidence 8764
No 358
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.79 E-value=0.032 Score=55.78 Aligned_cols=109 Identities=14% Similarity=0.084 Sum_probs=58.7
Q ss_pred chhccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeC---CHHHHHHHHh-hcCCCccCCCC-----CC--C-CceE
Q 012596 121 TDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR---DPAVCQSINE-KHCNCRYFPEQ-----KL--P-ENVI 188 (460)
Q Consensus 121 ~~~~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r---~~~~~~~l~~-~g~~~~~~~~~-----~l--~-~~i~ 188 (460)
++-.++|+||||+|+|++|..+.+.|.+.. +.+|+.++- +.+....+.+ .....++.... .+ . ..+.
T Consensus 11 ~~~~~~~ikVgI~G~G~iGr~llR~l~~~p-~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~ 89 (354)
T 3cps_A 11 RENLYFQGTLGINGFGRIGRLVLRACMERN-DITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVK 89 (354)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHTCS-SCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEE
T ss_pred ccCcCcceEEEEECCCHHHHHHHHHHHcCC-CeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEE
Confidence 333335689999999999999999998763 367776653 2222222221 11111111110 11 0 1233
Q ss_pred Ee--CCHHhhc---CCCcEEEEccchhcHHHHHHHhhhcCCCCC--eEEEec
Q 012596 189 AT--TDAKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (460)
Q Consensus 189 a~--~~~~ea~---~~aDiVilaVp~~~~~~vl~~i~~~l~~~~--iIV~~~ 233 (460)
+. .++++.. .++|+||.|++.....+... .+++.|. +||+..
T Consensus 90 v~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~---~~l~~GakkvVId~p 138 (354)
T 3cps_A 90 VFQAKDPAEIPWGASGAQIVCESTGVFTTEEKAS---LHLKGGAKKVIISAP 138 (354)
T ss_dssp EECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHG---GGGTTTCSEEEESSC
T ss_pred EEecCChHHCCcccCCCCEEEECCCchhhHHHHH---HHHHcCCcEEEEeCC
Confidence 33 2555532 47999999999877665443 3444566 777765
No 359
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.79 E-value=0.007 Score=58.23 Aligned_cols=84 Identities=17% Similarity=0.201 Sum_probs=54.6
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH-------HHHHHHH---hhcCCCccCCCCCCCCceEEeCCHHh
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP-------AVCQSIN---EKHCNCRYFPEQKLPENVIATTDAKT 195 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~-------~~~~~l~---~~g~~~~~~~~~~l~~~i~a~~~~~e 195 (460)
||+|.|.|+ |.+|..++..|.+.| ++|++++|++ ++.+.+. ..+.. .+.. ++ .-.+++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~--~v~~-D~----~d~~~l~~ 72 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG--NPTYALVRKTITAANPETKEELIDNYQSLGVI--LLEG-DI----NDHETLVK 72 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT--CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCE--EEEC-CT----TCHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC--CcEEEEECCCcccCChHHHHHHHHHHHhCCCE--EEEe-CC----CCHHHHHH
Confidence 578999996 999999999999999 8999999986 5444332 22221 1000 00 00123456
Q ss_pred hcCCCcEEEEccchh---cHHHHHHHh
Q 012596 196 ALLGADYCLHAMPVQ---FSSSFLEGI 219 (460)
Q Consensus 196 a~~~aDiVilaVp~~---~~~~vl~~i 219 (460)
+++++|+||.+.... ....+++..
T Consensus 73 ~~~~~d~vi~~a~~~~~~~~~~l~~aa 99 (307)
T 2gas_A 73 AIKQVDIVICAAGRLLIEDQVKIIKAI 99 (307)
T ss_dssp HHTTCSEEEECSSSSCGGGHHHHHHHH
T ss_pred HHhCCCEEEECCcccccccHHHHHHHH
Confidence 778999999988643 234444444
No 360
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.77 E-value=0.0074 Score=58.60 Aligned_cols=87 Identities=15% Similarity=0.237 Sum_probs=55.4
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH------HHHHHH---HhhcCCCccCCCCCCCCceEEeCCHHh
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP------AVCQSI---NEKHCNCRYFPEQKLPENVIATTDAKT 195 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~------~~~~~l---~~~g~~~~~~~~~~l~~~i~a~~~~~e 195 (460)
+||+|.|.|+ |.+|..++..|++.| ++|++++|++ ++.+.+ ...+. ..... ++ .-.+++.+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v--~~v~~-D~----~d~~~l~~ 73 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFS--HPTFIYARPLTPDSTPSSVQLREEFRSMGV--TIIEG-EM----EEHEKMVS 73 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECCCCTTCCHHHHHHHHHHHHTTC--EEEEC-CT----TCHHHHHH
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCC--CcEEEEECCcccccChHHHHHHHHhhcCCc--EEEEe-cC----CCHHHHHH
Confidence 3578999996 999999999999999 9999999985 333333 22222 11000 00 00123556
Q ss_pred hcCCCcEEEEccchh---cHHHHHHHhhh
Q 012596 196 ALLGADYCLHAMPVQ---FSSSFLEGISD 221 (460)
Q Consensus 196 a~~~aDiVilaVp~~---~~~~vl~~i~~ 221 (460)
+++++|+||.+.... ....+++...+
T Consensus 74 a~~~~d~vi~~a~~~~~~~~~~l~~aa~~ 102 (321)
T 3c1o_A 74 VLKQVDIVISALPFPMISSQIHIINAIKA 102 (321)
T ss_dssp HHTTCSEEEECCCGGGSGGGHHHHHHHHH
T ss_pred HHcCCCEEEECCCccchhhHHHHHHHHHH
Confidence 778999999987642 34455554433
No 361
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.63 E-value=0.0088 Score=58.03 Aligned_cols=84 Identities=17% Similarity=0.190 Sum_probs=54.0
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHH-HHH---HHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA-VCQ---SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~-~~~---~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
++|.|.|+ |.+|..++..|.+.| ++|++++|++. ..+ .+...+.... ..+. .-.+++.++++++|+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~l~~~~v~~v-~~Dl------~d~~~l~~a~~~~d~ 82 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLG--HPTYVFTRPNSSKTTLLDEFQSLGAIIV-KGEL------DEHEKLVELMKKVDV 82 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECTTCSCHHHHHHHHHTTCEEE-ECCT------TCHHHHHHHHTTCSE
T ss_pred CeEEEECCCchHHHHHHHHHHHCC--CcEEEEECCCCchhhHHHHhhcCCCEEE-EecC------CCHHHHHHHHcCCCE
Confidence 58999995 999999999999999 89999999864 322 2233332110 0010 001234567789999
Q ss_pred EEEccchh---cHHHHHHHhh
Q 012596 203 CLHAMPVQ---FSSSFLEGIS 220 (460)
Q Consensus 203 VilaVp~~---~~~~vl~~i~ 220 (460)
||.+.... ....+++...
T Consensus 83 vi~~a~~~~~~~~~~l~~aa~ 103 (318)
T 2r6j_A 83 VISALAFPQILDQFKILEAIK 103 (318)
T ss_dssp EEECCCGGGSTTHHHHHHHHH
T ss_pred EEECCchhhhHHHHHHHHHHH
Confidence 99988643 2444554443
No 362
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.60 E-value=0.009 Score=59.54 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=31.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
|||.|||+|..|.++|..|+++| ++|++++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G--~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG--IKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CCEEEEecCC
Confidence 89999999999999999999999 9999998754
No 363
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.59 E-value=0.025 Score=52.35 Aligned_cols=73 Identities=18% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~--G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
++|+|.|.| .|.+|..++..|++. | ++|++.+|+++..+.+ +.+..++.. + +.-.++..++++++|+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g--~~V~~~~r~~~~~~~~---~~~~~~~~~-D----~~d~~~~~~~~~~~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDK--FVAKGLVRSAQGKEKI---GGEADVFIG-D----ITDADSINPAFQGIDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTT--CEEEEEESCHHHHHHT---TCCTTEEEC-C----TTSHHHHHHHHTTCSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCC--cEEEEEEcCCCchhhc---CCCeeEEEe-c----CCCHHHHHHHHcCCCE
Confidence 468999999 599999999999999 6 8999999998765543 111111100 0 0001134456778999
Q ss_pred EEEccc
Q 012596 203 CLHAMP 208 (460)
Q Consensus 203 VilaVp 208 (460)
||.+..
T Consensus 73 vi~~a~ 78 (253)
T 1xq6_A 73 LVILTS 78 (253)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 998653
No 364
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.58 E-value=0.078 Score=54.88 Aligned_cols=93 Identities=13% Similarity=0.247 Sum_probs=63.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH----HhhcCCCcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA----KTALLGADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~----~ea~~~aDi 202 (460)
..+|.|+|+|.+|..+|..|.+ + ++|.++.+++++++.+.+.--+...+.+. .+|. ++-++++|+
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~--~~v~iIE~d~~r~~~la~~l~~~~Vi~GD--------~td~~~L~ee~i~~~D~ 303 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T--YSVKLIERNLQRAEKLSEELENTIVFCGD--------AADQELLTEENIDQVDV 303 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T--SEEEEEESCHHHHHHHHHHCTTSEEEESC--------TTCHHHHHHTTGGGCSE
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c--CceEEEecCHHHHHHHHHHCCCceEEecc--------ccchhhHhhcCchhhcE
Confidence 4789999999999999999864 4 89999999999999998753211111000 1122 223578999
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEE
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFI 230 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV 230 (460)
++.++..+...=+...+++.+....++.
T Consensus 304 ~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 304 FIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp EEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 9999988766555555555555443433
No 365
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.58 E-value=0.0053 Score=56.26 Aligned_cols=35 Identities=17% Similarity=0.405 Sum_probs=32.3
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHH
Q 012596 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAV 164 (460)
Q Consensus 128 ~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~ 164 (460)
|||.|.| .|.+|..++..|++.| ++|++++|+++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~ 36 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD--YQIYAGARKVEQ 36 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS--CEEEEEESSGGG
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCccc
Confidence 6899999 7999999999999999 999999999753
No 366
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.57 E-value=0.011 Score=56.80 Aligned_cols=75 Identities=23% Similarity=0.259 Sum_probs=49.9
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHH--HHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVC--QSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~--~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
++|+|.|.|+ |.+|..++..|.+.| +++|++.+|+++.. +.+...+.... ..+. .-.++..++++++|.
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~R~~~~~~~~~l~~~~~~~~-~~D~------~d~~~l~~~~~~~d~ 75 (299)
T 2wm3_A 4 DKKLVVVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKKAAKELRLQGAEVV-QGDQ------DDQVIMELALNGAYA 75 (299)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHC-SSEEEEEESCTTSHHHHHHHHTTCEEE-ECCT------TCHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcC-CceEEEEEcCCCCHHHHHHHHCCCEEE-EecC------CCHHHHHHHHhcCCE
Confidence 3579999997 999999999999876 27999999987543 33333332100 0000 001234566789999
Q ss_pred EEEccc
Q 012596 203 CLHAMP 208 (460)
Q Consensus 203 VilaVp 208 (460)
||.+..
T Consensus 76 vi~~a~ 81 (299)
T 2wm3_A 76 TFIVTN 81 (299)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 999875
No 367
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.53 E-value=0.012 Score=56.51 Aligned_cols=33 Identities=33% Similarity=0.557 Sum_probs=31.2
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
|||.|.|+ |-+|+.++..|.++| |+|+++.|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G--~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG--HEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCC
Confidence 79999997 999999999999999 9999999975
No 368
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.51 E-value=0.011 Score=56.40 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=33.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~ 163 (460)
++|||.|.|+|.+|+.++..|.+.| ++|++++|+.+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQG--HEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT--CCEEEEECTTS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCcc
Confidence 5689999999999999999999999 99999999864
No 369
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.50 E-value=0.023 Score=55.31 Aligned_cols=36 Identities=25% Similarity=0.306 Sum_probs=32.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+..||.|||+|.+|+.++..|+++|. -.++++|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGV-G~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGI-GKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCC-CEEEEECCCc
Confidence 35799999999999999999999996 4799999876
No 370
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.49 E-value=0.021 Score=56.98 Aligned_cols=98 Identities=15% Similarity=0.231 Sum_probs=61.7
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
.|.||+||| .|..|.-|.+.|.+.. ..++..+......-+.+.+.... +..+.. +.. .+.++...++|+||
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP-~~el~~l~S~~~aG~~~~~~~p~--~~~~l~----~~~-~~~~~~~~~~Dvvf 83 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHP-EAKITYLSSRTYAGKKLEEIFPS--TLENSI----LSE-FDPEKVSKNCDVLF 83 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCT-TEEEEEEECSTTTTSBHHHHCGG--GCCCCB----CBC-CCHHHHHHHCSEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCC-CcEEEEEeCcccccCChHHhChh--hccCce----EEe-CCHHHhhcCCCEEE
Confidence 467999998 6999999999999874 35677665433211222211100 001111 111 14555447899999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+|+|.....++...+ .|..||+++.-+
T Consensus 84 ~alp~~~s~~~~~~~-----~g~~VIDlSsdf 110 (351)
T 1vkn_A 84 TALPAGASYDLVREL-----KGVKIIDLGADF 110 (351)
T ss_dssp ECCSTTHHHHHHTTC-----CSCEEEESSSTT
T ss_pred ECCCcHHHHHHHHHh-----CCCEEEECChhh
Confidence 999988877766554 588999998644
No 371
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.49 E-value=0.05 Score=54.64 Aligned_cols=95 Identities=12% Similarity=0.191 Sum_probs=56.9
Q ss_pred CCeEEEEC-cchHHHHHHH-HHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 127 TNKVVVLG-GGSFGTAMAA-HVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~-~La~~G~-~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
|+||+|+| .|.+|..+.+ .|.+..+ ..+++++..+. .|.....+.+..+ .+.-..++++ .+++|+|
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s--------~G~~v~~~~g~~i--~~~~~~~~~~-~~~~DvV 69 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ--------LGQAAPSFGGTTG--TLQDAFDLEA-LKALDII 69 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS--------TTSBCCGGGTCCC--BCEETTCHHH-HHTCSEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC--------CCCCccccCCCce--EEEecCChHH-hcCCCEE
Confidence 47999999 9999999999 5554431 13455555431 1211111111111 1222234554 4789999
Q ss_pred EEccchhcHHHHHHHhhhcCCCCC--eEEEeccC
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPGL--PFISLSKG 235 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~~--iIV~~~~G 235 (460)
|.|+|.....+....+.+ .|. ++|+.+.-
T Consensus 70 f~a~g~~~s~~~a~~~~~---~G~k~vVID~ss~ 100 (367)
T 1t4b_A 70 VTCQGGDYTNEIYPKLRE---SGWQGYWIDAASS 100 (367)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCCCEEEECSST
T ss_pred EECCCchhHHHHHHHHHH---CCCCEEEEcCChh
Confidence 999998777776665543 344 88988753
No 372
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.48 E-value=0.1 Score=52.06 Aligned_cols=36 Identities=25% Similarity=0.446 Sum_probs=31.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+..+|.|||+|.+|+.++..|+++|. -.++++|++.
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGv-g~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGI-GEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCC-CeEEEECCCc
Confidence 35799999999999999999999995 4799999874
No 373
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.47 E-value=0.011 Score=53.64 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=30.8
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
..|+|||+|.-|.+.|..|+++| ++|+++++.+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G--~~V~v~Ek~~ 35 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCC
Confidence 57999999999999999999999 9999999864
No 374
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.44 E-value=0.048 Score=54.50 Aligned_cols=90 Identities=13% Similarity=0.065 Sum_probs=58.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCcEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiVi 204 (460)
..++|+|+|.|++|...|..|.+.| .+|+++|++++. .+..+.. . .... +.++++. +||+++
T Consensus 174 ~GktV~I~G~GnVG~~~A~~l~~~G--akVvvsD~~~~~-~~~a~~~-g------------a~~v-~~~ell~~~~DIli 236 (355)
T 1c1d_A 174 DGLTVLVQGLGAVGGSLASLAAEAG--AQLLVADTDTER-VAHAVAL-G------------HTAV-ALEDVLSTPCDVFA 236 (355)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHH-HHHHHHT-T------------CEEC-CGGGGGGCCCSEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC--CEEEEEeCCccH-HHHHHhc-C------------CEEe-ChHHhhcCccceec
Confidence 3589999999999999999999998 899999998765 3333221 1 1222 4456556 899998
Q ss_pred Eccchhc-HHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 205 HAMPVQF-SSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 205 laVp~~~-~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
-|--... ..+-++. ++ ..+|+...||-.
T Consensus 237 P~A~~~~I~~~~~~~----lk-~~iVie~AN~p~ 265 (355)
T 1c1d_A 237 PCAMGGVITTEVART----LD-CSVVAGAANNVI 265 (355)
T ss_dssp ECSCSCCBCHHHHHH----CC-CSEECCSCTTCB
T ss_pred HhHHHhhcCHHHHhh----CC-CCEEEECCCCCC
Confidence 5422212 2233333 33 467888777643
No 375
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.41 E-value=0.016 Score=56.84 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=49.7
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHHHhhc-----CCCccCCCCCCCCceEEeCCHH
Q 012596 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSINEKH-----CNCRYFPEQKLPENVIATTDAK 194 (460)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~----~~~~~l~~~g-----~~~~~~~~~~l~~~i~a~~~~~ 194 (460)
+++|+|.|.|+ |.+|..++..|.+.| ++|++++|+. +..+.+.... .+..++. ..+.-.++..
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~ 95 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLN--QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE-----GDIRDLTTCE 95 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEE-----CCTTCHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEE-----ccCCCHHHHH
Confidence 45689999995 999999999999999 9999999954 3344443311 0111100 0000011345
Q ss_pred hhcCCCcEEEEccc
Q 012596 195 TALLGADYCLHAMP 208 (460)
Q Consensus 195 ea~~~aDiVilaVp 208 (460)
++++++|+||.+..
T Consensus 96 ~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 96 QVMKGVDHVLHQAA 109 (351)
T ss_dssp HHTTTCSEEEECCC
T ss_pred HHhcCCCEEEECCc
Confidence 66779999998764
No 376
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.40 E-value=0.014 Score=56.44 Aligned_cols=69 Identities=22% Similarity=0.245 Sum_probs=47.6
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+|||.|.| .|.+|+.++..|.+.| ++|++++|++...+ +. +. .+. ...+. .++..++++++|+||.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~--~~--~~~-----~~Dl~-~~~~~~~~~~~d~Vih 68 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG--NTPIILTRSIGNKA-IN--DY--EYR-----VSDYT-LEDLINQLNDVDAVVH 68 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCC--------CC--EEE-----ECCCC-HHHHHHHTTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC--CEEEEEeCCCCccc-CC--ce--EEE-----Ecccc-HHHHHHhhcCCCEEEE
Confidence 47999999 5999999999999999 99999999854333 32 11 110 01122 2345677889999998
Q ss_pred ccc
Q 012596 206 AMP 208 (460)
Q Consensus 206 aVp 208 (460)
+..
T Consensus 69 ~a~ 71 (311)
T 3m2p_A 69 LAA 71 (311)
T ss_dssp CCC
T ss_pred ccc
Confidence 754
No 377
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.31 E-value=0.058 Score=55.78 Aligned_cols=90 Identities=17% Similarity=0.211 Sum_probs=66.6
Q ss_pred CCCeEEEECcc----hHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 126 RTNKVVVLGGG----SFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 126 ~~~kI~IIGaG----~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
+.++|+|||++ .+|..+..+|.+.| ...|+.++.....+ .++.+..++.++.+..|
T Consensus 7 ~p~siAVvGas~~~~~~g~~v~~~l~~~g-~~~v~pVnP~~~~i-------------------~G~~~y~sl~~lp~~~D 66 (457)
T 2csu_A 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEEV-------------------QGVKAYKSVKDIPDEID 66 (457)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSEE-------------------TTEECBSSTTSCSSCCS
T ss_pred CCCeEEEECcCCCCCchHHHHHHHHHHcC-CCEEEEECCCCCeE-------------------CCEeccCCHHHcCCCCC
Confidence 46899999998 89999999999886 47887777652100 12445567777666799
Q ss_pred EEEEccchhcHHHHHHHhhhcCCCCCeEEEeccCCc
Q 012596 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (460)
Q Consensus 202 iVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~ 237 (460)
++++++|...+.+++++..+. . =..+|.++.|+.
T Consensus 67 lavi~vp~~~~~~~v~e~~~~-G-i~~vv~~s~G~~ 100 (457)
T 2csu_A 67 LAIIVVPKRFVKDTLIQCGEK-G-VKGVVIITAGFG 100 (457)
T ss_dssp EEEECSCHHHHHHHHHHHHHH-T-CCEEEECCCSST
T ss_pred EEEEecCHHHHHHHHHHHHHc-C-CCEEEEecCCCC
Confidence 999999999998888877653 1 135677787884
No 378
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.26 E-value=0.017 Score=61.20 Aligned_cols=94 Identities=12% Similarity=0.177 Sum_probs=61.3
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHH-hhcCCCcEEEEc
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAK-TALLGADYCLHA 206 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~-ea~~~aDiVila 206 (460)
++|.|+|+|.+|..+|..|.+.| ++|++++.+++.++.+. .....+..-+ +.++ .-++++|.++++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g--~~v~vid~d~~~~~~~~-----~~i~gD~t~~------~~L~~agi~~ad~vi~~ 415 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP--VPFILIDRQESPVCNDH-----VVVYGDATVG------QTLRQAGIDRASGIIVT 415 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCCSSCCSS-----CEEESCSSSS------THHHHHTTTSCSEEEEC
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--CCEEEEECChHHHhhcC-----CEEEeCCCCH------HHHHhcCccccCEEEEE
Confidence 78999999999999999999999 99999999987544221 0011110000 0112 235789999999
Q ss_pred cchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 207 MPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 207 Vp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
++++...-++-.+++.+.++..+|.-.+
T Consensus 416 ~~~d~~ni~~~~~ak~l~~~~~iiar~~ 443 (565)
T 4gx0_A 416 TNDDSTNIFLTLACRHLHSHIRIVARAN 443 (565)
T ss_dssp CSCHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred CCCchHHHHHHHHHHHHCCCCEEEEEEC
Confidence 9987544444444455555545555544
No 379
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.19 E-value=0.062 Score=51.34 Aligned_cols=47 Identities=23% Similarity=0.332 Sum_probs=35.5
Q ss_pred hhccCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 122 DILERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 122 ~~~~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
+.|++.+++.|.|+ |.+|.++|..|++.| ++|++.+|+.+..+.+.+
T Consensus 19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 66 (279)
T 3sju_A 19 SHMSRPQTAFVTGVSSGIGLAVARTLAARG--IAVYGCARDAKNVSAAVD 66 (279)
T ss_dssp ------CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 34556678889994 789999999999999 999999999887665543
No 380
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.17 E-value=0.0074 Score=57.44 Aligned_cols=72 Identities=15% Similarity=0.277 Sum_probs=49.8
Q ss_pred CeEEEECc-chHHHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~--G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
|+|.|.|+ |.+|+.++..|.+. | ++|++++|+++..+.+...+.... ..+. .-.++..++++++|+||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g--~~V~~~~r~~~~~~~l~~~~~~~~-~~D~------~d~~~l~~~~~~~d~vi 71 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA--SQIIAIVRNVEKASTLADQGVEVR-HGDY------NQPESLQKAFAGVSKLL 71 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG--GGEEEEESCTTTTHHHHHTTCEEE-ECCT------TCHHHHHHHTTTCSEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC--CeEEEEEcCHHHHhHHhhcCCeEE-Eecc------CCHHHHHHHHhcCCEEE
Confidence 57999997 99999999999998 8 999999998776655544322100 0010 00123456678899999
Q ss_pred Eccc
Q 012596 205 HAMP 208 (460)
Q Consensus 205 laVp 208 (460)
.+..
T Consensus 72 ~~a~ 75 (287)
T 2jl1_A 72 FISG 75 (287)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8764
No 381
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.16 E-value=0.025 Score=55.97 Aligned_cols=78 Identities=24% Similarity=0.421 Sum_probs=52.5
Q ss_pred ccCCCeEEEEC-cchHHHHHHHHHHhc-CCCC-eEEEEeCCHHHHHHHHhhc--CCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 124 LERTNKVVVLG-GGSFGTAMAAHVANK-KSQL-KVYMLMRDPAVCQSINEKH--CNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~~A~~La~~-G~~~-~V~v~~r~~~~~~~l~~~g--~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
|++.|+|.|.| .|.+|..++..|++. | + +|++++|++...+.+.+.- ....++. ..+.-.++..++++
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~-----~Dl~d~~~l~~~~~ 90 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTN--AKKIIVYSRDELKQSEMAMEFNDPRMRFFI-----GDVRDLERLNYALE 90 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCC--CSEEEEEESCHHHHHHHHHHHCCTTEEEEE-----CCTTCHHHHHHHTT
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCC--CCEEEEEECChhhHHHHHHHhcCCCEEEEE-----CCCCCHHHHHHHHh
Confidence 44568999999 599999999999998 8 6 9999999988766654421 1111100 00000113345677
Q ss_pred CCcEEEEccc
Q 012596 199 GADYCLHAMP 208 (460)
Q Consensus 199 ~aDiVilaVp 208 (460)
++|+||.+..
T Consensus 91 ~~D~Vih~Aa 100 (344)
T 2gn4_A 91 GVDICIHAAA 100 (344)
T ss_dssp TCSEEEECCC
T ss_pred cCCEEEECCC
Confidence 8999998764
No 382
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.13 E-value=0.0081 Score=59.62 Aligned_cols=39 Identities=18% Similarity=0.379 Sum_probs=34.1
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhc-CCCCeEEEEeCCHHHHH
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQ 166 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~-G~~~~V~v~~r~~~~~~ 166 (460)
++|||.|.| .|.+|+.++..|.+. | ++|++++|+.+...
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~ 63 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTD--WEVFGMDMQTDRLG 63 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSS--CEEEEEESCCTTTG
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC--CEEEEEeCChhhhh
Confidence 468999999 599999999999998 8 99999999875443
No 383
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.10 E-value=0.037 Score=53.28 Aligned_cols=78 Identities=22% Similarity=0.261 Sum_probs=50.9
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEe--CCHHhhcCCCcE
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT--TDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~--~~~~ea~~~aDi 202 (460)
+.+++.|+| +|.+|.+++..|++.| .+|++++|+.++.+++.+.-.. . .+... ....++ ++..++++++|+
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G--~~V~i~~R~~~~~~~l~~~~~~-~--~~~~~-~~~D~~~~~~~~~~~~~~Dv 191 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEG--AEVVLCGRKLDKAQAAADSVNK-R--FKVNV-TAAETADDASRAEAVKGAHF 191 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHHHH-H--HTCCC-EEEECCSHHHHHHHTTTCSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCc--CEEEEEECCHHHHHHHHHHHHh-c--CCcEE-EEecCCCHHHHHHHHHhCCE
Confidence 357899999 9999999999999999 8899999998877665432100 0 00000 000111 123455667888
Q ss_pred EEEccch
Q 012596 203 CLHAMPV 209 (460)
Q Consensus 203 VilaVp~ 209 (460)
||-+++.
T Consensus 192 lVn~ag~ 198 (287)
T 1lu9_A 192 VFTAGAI 198 (287)
T ss_dssp EEECCCT
T ss_pred EEECCCc
Confidence 8888763
No 384
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.09 E-value=0.046 Score=54.42 Aligned_cols=92 Identities=14% Similarity=0.186 Sum_probs=58.0
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCC-CeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 128 NKVVVLG-GGSFGTAMAAHVANKKSQ-LKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 128 ~kI~IIG-aG~mG~~~A~~La~~G~~-~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+||+||| .|..|.-|.+.|.++.+. .++.++.... ..|.... +.+ ..+.+.+-..+.+.++|+||+
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~-------~aG~~~~-~~~----~~~~~~~~~~~~~~~~Dvvf~ 69 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASAR-------SQGRKLA-FRG----QEIEVEDAETADPSGLDIALF 69 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-------TSSCEEE-ETT----EEEEEEETTTSCCTTCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcc-------cCCCcee-ecC----CceEEEeCCHHHhccCCEEEE
Confidence 6899999 799999999999986421 2456554332 1132111 111 112222111234578999999
Q ss_pred ccchhcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 206 AMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 206 aVp~~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
|+|.....+....+.+ .|..+|+++.
T Consensus 70 a~~~~~s~~~a~~~~~---~G~~vID~Sa 95 (344)
T 3tz6_A 70 SAGSAMSKVQAPRFAA---AGVTVIDNSS 95 (344)
T ss_dssp CSCHHHHHHHHHHHHH---TTCEEEECSS
T ss_pred CCChHHHHHHHHHHHh---CCCEEEECCC
Confidence 9998877776665543 5788999875
No 385
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.08 E-value=0.22 Score=51.39 Aligned_cols=71 Identities=10% Similarity=0.060 Sum_probs=48.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeC-CHHhhcCCCcEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATT-DAKTALLGADYCL 204 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~~-~~~ea~~~aDiVi 204 (460)
.++|.|||+|.+|..-+..|.+.| .+|++++.+.. ..+.+.+.+. ..+ .... +.. .+.++|+||
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~g--a~V~vi~~~~~~~~~~l~~~~~-i~~----------~~~~~~~~-~l~~~~lVi 77 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAG--ARLTVNALTFIPQFTVWANEGM-LTL----------VEGPFDET-LLDSCWLAI 77 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--BEEEEEESSCCHHHHHHHTTTS-CEE----------EESSCCGG-GGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc--CEEEEEcCCCCHHHHHHHhcCC-EEE----------EECCCCcc-ccCCccEEE
Confidence 589999999999999999999999 99999997532 3444433221 110 0001 222 357899999
Q ss_pred Eccchhc
Q 012596 205 HAMPVQF 211 (460)
Q Consensus 205 laVp~~~ 211 (460)
.++....
T Consensus 78 ~at~~~~ 84 (457)
T 1pjq_A 78 AATDDDT 84 (457)
T ss_dssp ECCSCHH
T ss_pred EcCCCHH
Confidence 9876554
No 386
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.07 E-value=0.029 Score=53.90 Aligned_cols=97 Identities=20% Similarity=0.266 Sum_probs=63.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEEc
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (460)
.+++.|+|+|..+.+++..|++.|. .+|++++|+.++++.+.+.-.. .++ ....... .+.++++|+||-+
T Consensus 125 ~~~~lilGaGGaarai~~aL~~~g~-~~i~i~nRt~~ra~~la~~~~~--~~~------~~~~~~~-~~~~~~~dliiNa 194 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYALAEAGI-ASITLCDPSTARMGAVCELLGN--GFP------GLTVSTQ-FSGLEDFDLVANA 194 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHH--HCT------TCEEESC-CSCSTTCSEEEEC
T ss_pred cCeEEEEecHHHHHHHHHHHHHhCC-CeEEEeCCCHHHHHHHHHHHhc--cCC------cceehhh-hhhhhcccccccC
Confidence 5789999999999999999999983 5899999999988777653100 000 1122222 2335789999999
Q ss_pred cchhc---HH-HHHHHhhhcCCCCCeEEEec
Q 012596 207 MPVQF---SS-SFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 207 Vp~~~---~~-~vl~~i~~~l~~~~iIV~~~ 233 (460)
+|..- .. .+-......++++.++.++.
T Consensus 195 Tp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 195 SPVGMGTRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp SSTTCSTTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred CccccCCCCCCCCChHHHhccCCCcEEEEEc
Confidence 98421 00 01112233456677888875
No 387
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.01 E-value=0.0078 Score=55.80 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=47.1
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~--~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
+.|+|.|.| .|.+|..++..|++.| + +|++++|+++..+.....+. .++ ...+.-.++..++++++|+
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G--~~~~V~~~~r~~~~~~~~~~~~~--~~~-----~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQG--LFSKVTLIGRRKLTFDEEAYKNV--NQE-----VVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHT--CCSEEEEEESSCCCCCSGGGGGC--EEE-----ECCGGGGGGGGGGGSSCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCC--CCCEEEEEEcCCCCccccccCCc--eEE-----ecCcCCHHHHHHHhcCCCE
Confidence 457999999 6999999999999999 8 99999998643221111110 000 0000001234455678899
Q ss_pred EEEccc
Q 012596 203 CLHAMP 208 (460)
Q Consensus 203 VilaVp 208 (460)
||.+..
T Consensus 88 vi~~ag 93 (242)
T 2bka_A 88 GFCCLG 93 (242)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998765
No 388
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.88 E-value=0.037 Score=55.84 Aligned_cols=97 Identities=15% Similarity=0.182 Sum_probs=61.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-------HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG 199 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~-------~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~ 199 (460)
..||.|+|+|..|..+|+.|...|. .+|+++|++- +.+..+++. + ....-+ .....++.|++++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga-~~I~v~D~~Gli~~~R~~~L~~~k~~-----f-a~~~~~--~~~~~~L~eav~~ 258 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGA-TKVTVVDKFGIINEQEAAQLAPHHLD-----I-AKVTNR--EFKSGTLEDALEG 258 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEETTEECCTTCCCSCCC---C-----H-HHHHSC--TTCCCSCSHHHHT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCC-CeEEEEECCCcccCCccccchHHHHH-----H-hhccCc--ccchhhHHHHhcc
Confidence 4699999999999999999999982 3999999862 101100000 0 000000 0012367888999
Q ss_pred CcEEEEccch-hcHHHHHHHhhhcCCCCCeEEEeccCC
Q 012596 200 ADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGL 236 (460)
Q Consensus 200 aDiVilaVp~-~~~~~vl~~i~~~l~~~~iIV~~~~Gi 236 (460)
+|++|=+... -..+++++. |.++.+|+.++|-.
T Consensus 259 ADV~IG~Sapgl~T~EmVk~----Ma~~pIIfalsNPt 292 (398)
T 2a9f_A 259 ADIFIGVSAPGVLKAEWISK----MAARPVIFAMANPI 292 (398)
T ss_dssp TCSEEECCSTTCCCHHHHHT----SCSSCEEEECCSSS
T ss_pred CCEEEecCCCCCCCHHHHHh----hCCCCEEEECCCCC
Confidence 9998765432 235666555 45789999999954
No 389
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.86 E-value=0.028 Score=55.49 Aligned_cols=34 Identities=41% Similarity=0.571 Sum_probs=31.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~ 161 (460)
++.+|.|||+|.+|.+.|..|+++| .+|+++++.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G--~~V~vle~~ 38 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKG--YSVHILARD 38 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC--CEEEEEecc
Confidence 3578999999999999999999999 899999975
No 390
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=94.85 E-value=0.073 Score=55.98 Aligned_cols=74 Identities=8% Similarity=-0.043 Sum_probs=50.1
Q ss_pred hhccCCCeEEEECcchHHHH-HHHHHHhcCCCCeEEEEeCCH--HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC
Q 012596 122 DILERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDP--AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (460)
Q Consensus 122 ~~~~~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~v~~r~~--~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (460)
.++.+.++|-|||.|..|.+ +|..|.+.| ++|+++|... ...+.+.+.|.. +..-.+++....
T Consensus 14 ~~~~~~~~i~~iGiGg~Gms~lA~~l~~~G--~~V~~sD~~~~~~~~~~L~~~gi~------------~~~G~~~~~~~~ 79 (524)
T 3hn7_A 14 NLYFQGMHIHILGICGTFMGSLALLARALG--HTVTGSDANIYPPMSTQLEQAGVT------------IEEGYLIAHLQP 79 (524)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCCTTHHHHHHHTTCE------------EEESCCGGGGCS
T ss_pred ceeecCCEEEEEEecHhhHHHHHHHHHhCC--CEEEEECCCCCcHHHHHHHHCCCE------------EECCCCHHHcCC
Confidence 36667799999999999986 788889999 9999999863 345667776642 112224444446
Q ss_pred CCcEEEEc--cch
Q 012596 199 GADYCLHA--MPV 209 (460)
Q Consensus 199 ~aDiVila--Vp~ 209 (460)
++|+||++ +|.
T Consensus 80 ~~d~vV~Spgi~~ 92 (524)
T 3hn7_A 80 APDLVVVGNAMKR 92 (524)
T ss_dssp CCSEEEECTTCCT
T ss_pred CCCEEEECCCcCC
Confidence 79999985 553
No 391
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.78 E-value=0.083 Score=49.79 Aligned_cols=42 Identities=21% Similarity=0.330 Sum_probs=35.7
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
.++|.|.| .|.+|..+|..|++.| ++|++.+|+.+..+.+.+
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~ 71 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLG--ARVVLTARDVEKLRAVER 71 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 46788888 5899999999999999 899999999887665544
No 392
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.73 E-value=0.017 Score=56.35 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=33.3
Q ss_pred ccCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012596 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (460)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~ 163 (460)
|+++|+|.|.| .|.+|..++..|++.| ++|++.+|+.+
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G--~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHG--YDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTT--CEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCC--CcEEEEecCCc
Confidence 44568999999 5999999999999999 99999998754
No 393
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=94.69 E-value=1.7 Score=41.73 Aligned_cols=165 Identities=15% Similarity=0.205 Sum_probs=98.3
Q ss_pred CceEEeCCHHhhcCCCcEEEEccchhc-HHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEE
Q 012596 185 ENVIATTDAKTALLGADYCLHAMPVQF-SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALS 263 (460)
Q Consensus 185 ~~i~a~~~~~ea~~~aDiVilaVp~~~-~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~ 263 (460)
-++++++|-.|+++++|++|+-+|-.. ..++++.|.+++++|++|.+..+ +.+- .+...++. ++.. +..+.+
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCT-ipp~---~ly~~le~-l~R~--DvgIsS 199 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACT-IPTT---KFAKIFKD-LGRE--DLNITS 199 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSS-SCHH---HHHHHHHH-TTCT--TSEEEE
T ss_pred cCcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccC-CCHH---HHHHHHHH-hCcc--cCCeec
Confidence 367888888899999999999999654 78899999999999998887654 4442 33444444 4543 233322
Q ss_pred -CcccHHHHhccCCeEEEEccCCHHHHHHHHHHHhcCCceEEE-cCChHHHH--HHHHHHHHHHHHHHHHh----c-ccC
Q 012596 264 -GPSFALELMNKLPTAMVVASKDRKLANAVQQLLASKHLRIST-SSDVTGVE--IAGALKNVLAIAAGIVV----G-MNL 334 (460)
Q Consensus 264 -gP~~a~e~~~g~~~~i~i~~~d~~~~~~l~~lL~~~g~~v~~-~~Di~g~~--~~kalkNv~ai~~g~~~----~-~kl 334 (460)
-|.-.-+ ..|+ ...-.+-.+.++.+++.++-++.+-..+. ..|+.+.. ++.++.-+. .+|+.+ + ..+
T Consensus 200 ~HPaaVPg-t~Gq-~~~g~~yAtEEqIeklveLaksa~k~ay~vPAdl~SpV~DMgs~vTAv~--~AGiL~Y~~~vtkIl 275 (358)
T 2b0j_A 200 YHPGCVPE-MKGQ-VYIAEGYASEEAVNKLYEIGKIARGKAFKMPANLIGPVCDMCSAVTATV--YAGLLAYRDAVTKIL 275 (358)
T ss_dssp CBCSSCTT-TCCC-EEEEESSSCHHHHHHHHHHHHHHHSCEEEEEHHHHHHHHSTTHHHHHHH--HHHHHHHHHHHHTTS
T ss_pred cCCCCCCC-CCCc-cccccccCCHHHHHHHHHHHHHhCCCeEecchhhccchhhhHHHHHHHH--HHHHHHHHHHHHHHh
Confidence 2221111 1333 22223335789999999999987655543 44444321 222222110 123321 1 123
Q ss_pred CCcH--HHHHHHHHHHHHHHHHHHcCCC
Q 012596 335 GNNS--MAALVAQGCSEIRWLATKMGAK 360 (460)
Q Consensus 335 ~~n~--~~al~~~~~~E~~~la~a~Gi~ 360 (460)
+.+. ....+...+.-+..|-+..|++
T Consensus 276 gAP~~mie~q~~esL~tiasLve~~GI~ 303 (358)
T 2b0j_A 276 GAPADFAQMMADEALTQIHNLMKEKGIA 303 (358)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3332 2355667778888888999987
No 394
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.65 E-value=0.13 Score=50.82 Aligned_cols=103 Identities=15% Similarity=0.184 Sum_probs=58.3
Q ss_pred CeEEEECcchHHHHHHHHHHhcC-CCCeEEEEe-C-CHHHHHHHHhhc-CCCccCCC-----CCC--C-CceEEe--CCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKK-SQLKVYMLM-R-DPAVCQSINEKH-CNCRYFPE-----QKL--P-ENVIAT--TDA 193 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G-~~~~V~v~~-r-~~~~~~~l~~~g-~~~~~~~~-----~~l--~-~~i~a~--~~~ 193 (460)
+||||+|+|.+|..+.+.|.+++ .+.+|+.++ + +.+....+.+.. ...++... ..+ . ..+.+. .++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 48999999999999999998762 236777554 3 444443333211 11111111 011 1 134443 255
Q ss_pred Hhhc-C--CCcEEEEccchhcHHHHHHHhhhcCCCCC--eEEEec
Q 012596 194 KTAL-L--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (460)
Q Consensus 194 ~ea~-~--~aDiVilaVp~~~~~~vl~~i~~~l~~~~--iIV~~~ 233 (460)
++.- . ++|+||.|+|.....+...... +.|. +||+..
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~s~e~a~~~l---~aGakkvVId~~ 122 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFRNREKAELHL---QAGAKKVIITAP 122 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred HHCcccccCCCEEEECCccchhHHHHHHHH---HcCCcEEEEeCC
Confidence 5431 2 7999999999776655444332 2344 777654
No 395
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=94.63 E-value=0.2 Score=50.37 Aligned_cols=92 Identities=13% Similarity=0.154 Sum_probs=52.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcC-CCCeEEEEe-C-CHHHHHHHHhhcC-CCccCCC-----CCC--C-CceEE--eCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKK-SQLKVYMLM-R-DPAVCQSINEKHC-NCRYFPE-----QKL--P-ENVIA--TTD 192 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G-~~~~V~v~~-r-~~~~~~~l~~~g~-~~~~~~~-----~~l--~-~~i~a--~~~ 192 (460)
++||||+|+|++|..+.+.|.+++ .+.+|+.++ + +.+....+.+..- .-++... ..+ . ..+.+ ..|
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 369999999999999999998762 235666544 3 4444434433211 0011111 111 1 12333 235
Q ss_pred HHhhc---CCCcEEEEccchhcHHHHHHH
Q 012596 193 AKTAL---LGADYCLHAMPVQFSSSFLEG 218 (460)
Q Consensus 193 ~~ea~---~~aDiVilaVp~~~~~~vl~~ 218 (460)
+++.. .++|+||.|++.....+....
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~ 110 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASK 110 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHH
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHH
Confidence 65532 279999999997765554443
No 396
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=94.63 E-value=0.2 Score=49.63 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=56.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcC-CCCeEEEEe-C-CHHHHHHHHhhc-CCCccCC------CCC--CC-CceEEe--C
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKK-SQLKVYMLM-R-DPAVCQSINEKH-CNCRYFP------EQK--LP-ENVIAT--T 191 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G-~~~~V~v~~-r-~~~~~~~l~~~g-~~~~~~~------~~~--l~-~~i~a~--~ 191 (460)
++||||+|+|++|..+.+.|.+++ ...+|+.++ . +.+....+-+.- ..-++.. +.. +. ..+.+. .
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 368999999999999999998762 124565444 2 333333333221 0001111 111 11 122222 3
Q ss_pred CHHhh-cC--CCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 192 DAKTA-LL--GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 192 ~~~ea-~~--~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
++.+. .. ++|+||.|++.....+...... +.|..+|.++
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l---~~Gak~V~iS 122 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHL---QAGAKKVLIT 122 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHH---HTTCSEEEES
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHH---HcCCEEEEEC
Confidence 55442 23 7999999999776655544332 2355555554
No 397
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.63 E-value=0.026 Score=55.17 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=32.0
Q ss_pred cCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
++..+|.|||+|..|.+.|..|+++| ++|+++++.+
T Consensus 2 ~~~~dvvIIG~G~~Gl~~A~~La~~G--~~V~vlE~~~ 37 (369)
T 3dme_A 2 STDIDCIVIGAGVVGLAIARALAAGG--HEVLVAEAAE 37 (369)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCC
Confidence 34568999999999999999999999 8999999874
No 398
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.62 E-value=0.2 Score=49.55 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=58.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEe-C-CHHHHHHHHhhcC-CCccCCCC-----CCC---CceEEe--CCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLM-R-DPAVCQSINEKHC-NCRYFPEQ-----KLP---ENVIAT--TDA 193 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~-r-~~~~~~~l~~~g~-~~~~~~~~-----~l~---~~i~a~--~~~ 193 (460)
++||||+|.|++|..+.+.|.++. +.+|+.++ + +.+....+.+..- ..++.... .+. +.+.+. .|+
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~-~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRS-DIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCS-SEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECcCHHHHHHHHHHHcCC-CeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 369999999999999999998764 35666544 3 3333333333211 11111100 110 112222 245
Q ss_pred Hhhc---CCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 194 KTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 194 ~ea~---~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
++.- .++|+||.|+|.....+..... ++.|..+|+++..
T Consensus 80 ~~i~w~~~~vDvVf~atg~~~s~e~a~~~---l~~GakvVdlSa~ 121 (330)
T 1gad_O 80 ANLKWDEVGVDVVAEATGLFLTDETARKH---ITAGAKKVVMTGP 121 (330)
T ss_dssp GGGCHHHHTCSEEEECSSSCCSHHHHTHH---HHTTCSEEEESSC
T ss_pred hhCccccccCCEEEECCCccccHHHHHHH---HHCCCEEEEECCC
Confidence 4421 4799999999977665544333 3346666666543
No 399
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.61 E-value=0.076 Score=52.41 Aligned_cols=88 Identities=17% Similarity=0.176 Sum_probs=62.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
...+|.|+|+|.+|...+..+...| .+|++.++++++.+.+++.|... + + .+.++..+.+|+||-
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~-----------v-~-~~~~~~~~~~D~vid 240 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDALSMGVKH-----------F-Y-TDPKQCKEELDFIIS 240 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHHHTTCSE-----------E-E-SSGGGCCSCEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHhcCCCe-----------e-c-CCHHHHhcCCCEEEE
Confidence 3579999999999999888888788 79999999998888877766421 1 1 344444447899999
Q ss_pred ccchh-cHHHHHHHhhhcCCCCCeEEEe
Q 012596 206 AMPVQ-FSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 206 aVp~~-~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
++... .+...++ .++++..++.+
T Consensus 241 ~~g~~~~~~~~~~----~l~~~G~iv~~ 264 (348)
T 3two_A 241 TIPTHYDLKDYLK----LLTYNGDLALV 264 (348)
T ss_dssp CCCSCCCHHHHHT----TEEEEEEEEEC
T ss_pred CCCcHHHHHHHHH----HHhcCCEEEEE
Confidence 99876 4554443 34445555554
No 400
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.54 E-value=0.2 Score=49.81 Aligned_cols=95 Identities=14% Similarity=0.137 Sum_probs=58.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-------------------HHHHHHHhh--cCCCccCCCCCCCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------------------AVCQSINEK--HCNCRYFPEQKLPE 185 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~-------------------~~~~~l~~~--g~~~~~~~~~~l~~ 185 (460)
..+|.|||+|.+|+.++..|+..|. ..++++|.+. .+++.+.+. ..+ |+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gv-g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln----p~v---- 106 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGV-KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN----PMV---- 106 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC----TTS----
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC----CCe----
Confidence 5799999999999999999999995 4799997542 122222221 011 111
Q ss_pred ceEEe-----CCHHhhcCCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEe
Q 012596 186 NVIAT-----TDAKTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 186 ~i~a~-----~~~~ea~~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
.+.+. ....+.+.++|+||.|+-+...+..+....... +..+|+.
T Consensus 107 ~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~--~ip~i~~ 156 (346)
T 1y8q_A 107 DVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKN--SIKFFTG 156 (346)
T ss_dssp EEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHT--TCEEEEE
T ss_pred EEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHc--CCCEEEE
Confidence 11111 123456788999999987766555555543322 3455543
No 401
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=94.54 E-value=0.17 Score=50.86 Aligned_cols=93 Identities=12% Similarity=0.173 Sum_probs=56.8
Q ss_pred CeEEEEC-cchHHHHHHH-HHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 128 NKVVVLG-GGSFGTAMAA-HVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 128 ~kI~IIG-aG~mG~~~A~-~La~~G~-~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
||||||| .|..|.-|.+ .|.++.+ ..++.++..+.. |.....+.+..+ .+...+++++ ++++|+||
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a--------G~~~~~~~~~~~--~~~~~~~~~~-~~~~Dvvf 69 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQI--------GVPAPNFGKDAG--MLHDAFDIES-LKQLDAVI 69 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSST--------TSBCCCSSSCCC--BCEETTCHHH-HTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecccc--------CcCHHHhCCCce--EEEecCChhH-hccCCEEE
Confidence 6899999 5999999999 7776541 135555543221 222111222111 1232234444 57999999
Q ss_pred EccchhcHHHHHHHhhhcCCCC--CeEEEecc
Q 012596 205 HAMPVQFSSSFLEGISDYVDPG--LPFISLSK 234 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~--~iIV~~~~ 234 (460)
+|+|.....+....+.+ .| .+||+++.
T Consensus 70 ~a~~~~~s~~~~~~~~~---~G~k~~VID~ss 98 (370)
T 3pzr_A 70 TCQGGSYTEKVYPALRQ---AGWKGYWIDAAS 98 (370)
T ss_dssp ECSCHHHHHHHHHHHHH---TTCCCEEEECSS
T ss_pred ECCChHHHHHHHHHHHH---CCCCEEEEeCCc
Confidence 99998877776665543 34 48898875
No 402
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.54 E-value=0.033 Score=55.29 Aligned_cols=76 Identities=16% Similarity=0.172 Sum_probs=48.9
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHH--HHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVC--QSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~--~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
.|+|.|.|+ |.+|..++..|++.| ++|++++|+++.. +.+.... +...+.. ++ +.-.++..++++++|.|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~l~~~~-~v~~v~~-D~---l~d~~~l~~~~~~~d~V 77 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG--HHVRAQVHSLKGLIAEELQAIP-NVTLFQG-PL---LNNVPLMDTLFEGAHLA 77 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT--CCEEEEESCSCSHHHHHHHTST-TEEEEES-CC---TTCHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEECCCChhhHHHHhhcC-CcEEEEC-Cc---cCCHHHHHHHHhcCCEE
Confidence 578999995 999999999999998 9999999987543 3333210 1111000 00 00001245567899999
Q ss_pred EEccch
Q 012596 204 LHAMPV 209 (460)
Q Consensus 204 ilaVp~ 209 (460)
|.+...
T Consensus 78 i~~a~~ 83 (352)
T 1xgk_A 78 FINTTS 83 (352)
T ss_dssp EECCCS
T ss_pred EEcCCC
Confidence 977653
No 403
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.51 E-value=0.15 Score=50.65 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=52.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcC-CCCeEEEEe-C-CHHHHHHHHhhcC-CCccCCCC-----CC--C-CceEE--eCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKK-SQLKVYMLM-R-DPAVCQSINEKHC-NCRYFPEQ-----KL--P-ENVIA--TTD 192 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G-~~~~V~v~~-r-~~~~~~~l~~~g~-~~~~~~~~-----~l--~-~~i~a--~~~ 192 (460)
++||||+|+|++|..+.+.|.+++ .+.+|+.++ + +++....+.+.-- .-++.... .+ . ..+.+ ..|
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 369999999999999999998762 235666444 3 4444444433210 00111111 11 1 12333 245
Q ss_pred HHhhc---CCCcEEEEccchhcHHHHHHH
Q 012596 193 AKTAL---LGADYCLHAMPVQFSSSFLEG 218 (460)
Q Consensus 193 ~~ea~---~~aDiVilaVp~~~~~~vl~~ 218 (460)
+++.. .++|+||.|++.....+....
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~ 110 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASK 110 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHH
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHH
Confidence 65532 278999999997665554443
No 404
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=94.44 E-value=0.21 Score=49.55 Aligned_cols=103 Identities=18% Similarity=0.181 Sum_probs=57.2
Q ss_pred CCeEEEECcchHHHHHHHHHHh---cCCCCeEEEEe-C-CHHHHHHHHhhc-CCCccCCC-----CCC---CCceEEe--
Q 012596 127 TNKVVVLGGGSFGTAMAAHVAN---KKSQLKVYMLM-R-DPAVCQSINEKH-CNCRYFPE-----QKL---PENVIAT-- 190 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~---~G~~~~V~v~~-r-~~~~~~~l~~~g-~~~~~~~~-----~~l---~~~i~a~-- 190 (460)
++||||+|+|++|..+.+.|.+ +. +.+|+.++ + +++....+-+.. ...++... ..+ ...+.+.
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~-~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~ 80 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRA-EITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHE 80 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGG-TEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCC-CEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEec
Confidence 3699999999999999999987 42 25666444 3 444444443311 10011100 011 1123333
Q ss_pred CCHHhhc-C--CCcEEEEccchhcHHHHHHHhhhcCCCCC--eEEEec
Q 012596 191 TDAKTAL-L--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (460)
Q Consensus 191 ~~~~ea~-~--~aDiVilaVp~~~~~~vl~~i~~~l~~~~--iIV~~~ 233 (460)
.|+++.. . ++|+||.|++.....+......+ .|. +||+..
T Consensus 81 ~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~---~GakkVVId~~ 125 (339)
T 2x5j_O 81 RSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIA---AGAKKVLFSHP 125 (339)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHH---TTCSEEEESSC
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHH---cCCCEEEEecc
Confidence 3555421 1 79999999998766555444332 333 466654
No 405
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=94.43 E-value=0.028 Score=57.72 Aligned_cols=98 Identities=10% Similarity=0.080 Sum_probs=61.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC---eEEEEe----CC----HH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL---KVYMLM----RD----PA-VCQSINEKHCNCRYFPEQKLPENVIATTDAK 194 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~---~V~v~~----r~----~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ 194 (460)
..||.|+|+|.+|.+++..|.+.| . +|+++| |+ +. ..+.+.... ..+... .... ....++.
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G--~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~--~~~a~~--~~~~-~~~~~L~ 258 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAG--VKPENVRVVELVNGKPRILTSDLDLEKLFPYR--GWLLKK--TNGE-NIEGGPQ 258 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTT--CCGGGEEEEEEETTEEEECCTTSCHHHHSTTC--HHHHTT--SCTT-CCCSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHcC--CCcCeEEEEEccCCCcCccccccchhHHHHHH--HHHhhc--cccc-cccccHH
Confidence 478999999999999999999998 5 799999 87 32 111122100 000000 0000 0123677
Q ss_pred hhcCCCcEEEEccch--hcHHHHHHHhhhcCCCCCeEEEecc
Q 012596 195 TALLGADYCLHAMPV--QFSSSFLEGISDYVDPGLPFISLSK 234 (460)
Q Consensus 195 ea~~~aDiVilaVp~--~~~~~vl~~i~~~l~~~~iIV~~~~ 234 (460)
++++++|++|-+++. ..... +..+.+.++.+|+++.|
T Consensus 259 e~l~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDLyn 297 (439)
T 2dvm_A 259 EALKDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPLAN 297 (439)
T ss_dssp HHHTTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEECCS
T ss_pred HHhccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEECCC
Confidence 888999999999997 33221 12234567788999966
No 406
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=94.42 E-value=0.085 Score=52.25 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=57.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEe-C-CHHHHHHHHhhcC-CCccCCC-----CCC--C-CceEEe--CCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLM-R-DPAVCQSINEKHC-NCRYFPE-----QKL--P-ENVIAT--TDA 193 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~-r-~~~~~~~l~~~g~-~~~~~~~-----~~l--~-~~i~a~--~~~ 193 (460)
|+||||+|+|++|..+.+.|.++. +.+|+.++ + +.+....+.+... ..++... ..+ . ..+.+. .++
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~-~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNP-DIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCT-TEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECCCHHHHHHHHHHhCCC-CeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCCh
Confidence 469999999999999999998763 25665443 3 3434433332110 0001000 011 1 123443 255
Q ss_pred Hhh-cC--CCcEEEEccchhcHHHHHHHhhhcCCCCC--eEEEec
Q 012596 194 KTA-LL--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (460)
Q Consensus 194 ~ea-~~--~aDiVilaVp~~~~~~vl~~i~~~l~~~~--iIV~~~ 233 (460)
++. .. ++|+||.|+|.....+...... +.|. +||+..
T Consensus 80 ~~i~w~~~~vDvV~~atg~~~s~e~a~~~l---~~Gak~vVId~p 121 (334)
T 3cmc_O 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHL---EAGAKKVIISAP 121 (334)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred hhcCcccCccCEEEECCCchhhHHHHHHHH---HCCCCEEEEeCC
Confidence 543 12 7999999999776555444332 2344 677654
No 407
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.38 E-value=0.018 Score=54.55 Aligned_cols=71 Identities=17% Similarity=0.295 Sum_probs=48.0
Q ss_pred eEEEECc-chHHHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 129 KVVVLGG-GSFGTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 129 kI~IIGa-G~mG~~~A~~La~~--G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
||.|.|+ |.+|..++..|.+. | ++|++++|+++..+.+...+.... ..+. .-.++..++++++|+||.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~D~------~d~~~~~~~~~~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA--SQIVAIVRNPAKAQALAAQGITVR-QADY------GDEAALTSALQGVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG--GGEEEEESCTTTCHHHHHTTCEEE-ECCT------TCHHHHHHHTTTCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC--ceEEEEEcChHhhhhhhcCCCeEE-EcCC------CCHHHHHHHHhCCCEEEE
Confidence 5889997 99999999999998 8 999999998766555543322100 0010 001234566788999998
Q ss_pred ccc
Q 012596 206 AMP 208 (460)
Q Consensus 206 aVp 208 (460)
+..
T Consensus 72 ~a~ 74 (286)
T 2zcu_A 72 ISS 74 (286)
T ss_dssp CC-
T ss_pred eCC
Confidence 764
No 408
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=94.37 E-value=0.17 Score=47.58 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=36.7
Q ss_pred CCCeEEEECc-c-hHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 126 RTNKVVVLGG-G-SFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 126 ~~~kI~IIGa-G-~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
+.+++.|.|+ | .+|..++..|++.| ++|++.+|+.+..+.+.+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 65 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG--ADVVISDYHERRLGETRD 65 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC--CEEEEecCCHHHHHHHHH
Confidence 3578999998 8 59999999999999 999999999887665544
No 409
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.37 E-value=0.012 Score=58.91 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=32.7
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~ 163 (460)
+||+|.|.|+ |.+|..++..|++.| ++|++++|++.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~ 64 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEG--HYVIASDWKKN 64 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCC--CeEEEEECCCc
Confidence 3689999997 999999999999999 99999999864
No 410
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.34 E-value=0.037 Score=54.37 Aligned_cols=36 Identities=17% Similarity=0.152 Sum_probs=32.6
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+++|+|.|.|+ |.+|..++..|++.| ++|++++|+.
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~ 61 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLD--QKVVGLDNFA 61 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 35689999998 999999999999999 9999999864
No 411
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.33 E-value=0.26 Score=49.68 Aligned_cols=99 Identities=20% Similarity=0.144 Sum_probs=62.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccC-CCCCCCCceEEeCCHHhhc--CCCcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYF-PEQKLPENVIATTDAKTAL--LGADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~-~~~~l~~~i~a~~~~~ea~--~~aDi 202 (460)
..+|.|+|+|.+|...+..+...| . .|++.++++++.+.+++.|...... .+.. ......+.. .++|+
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~------~~~~i~~~t~g~g~D~ 285 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAG--ASKVILSEPSEVRRNLAKELGADHVIDPTKEN------FVEAVLDYTNGLGAKL 285 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHTCSEEECTTTSC------HHHHHHHHTTTCCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHcCCCEEEcCCCCC------HHHHHHHHhCCCCCCE
Confidence 468999999999998888777777 6 8999999999888887777431100 0000 000111211 25899
Q ss_pred EEEccchh--cHHHHHHHhhhcCCCCCeEEEec
Q 012596 203 CLHAMPVQ--FSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 203 VilaVp~~--~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
||-++... ....+++.+...++++..++.+.
T Consensus 286 vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 286 FLEATGVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 99999865 33444443323336666666553
No 412
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.23 E-value=0.056 Score=56.39 Aligned_cols=71 Identities=17% Similarity=0.231 Sum_probs=49.5
Q ss_pred ccCCCeEEEECcchHHHH-HHHHHHhcCCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 124 LERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~v~~r~~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
+.+++||.|||.|..|.+ +|..|.+.| ++|+++|.... ..+.+.+.|.... .-.+++. +.++|
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G--~~V~~~D~~~~~~~~~l~~~gi~~~------------~g~~~~~-~~~~d 83 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEG--YQISGSDLAPNSVTQHLTALGAQIY------------FHHRPEN-VLDAS 83 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTT--CEEEEECSSCCHHHHHHHHTTCEEE------------SSCCGGG-GTTCS
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCC--CeEEEEECCCCHHHHHHHHCCCEEE------------CCCCHHH-cCCCC
Confidence 445689999999999985 899999999 99999997643 4566766664211 1123333 57899
Q ss_pred EEEEc--cch
Q 012596 202 YCLHA--MPV 209 (460)
Q Consensus 202 iVila--Vp~ 209 (460)
+||++ +|.
T Consensus 84 ~vV~Spgi~~ 93 (494)
T 4hv4_A 84 VVVVSTAISA 93 (494)
T ss_dssp EEEECTTSCT
T ss_pred EEEECCCCCC
Confidence 99985 553
No 413
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.23 E-value=0.041 Score=48.53 Aligned_cols=33 Identities=36% Similarity=0.478 Sum_probs=30.9
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
.+|.|||+|..|..+|..|++.| .+|+++++.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g--~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAG--LKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCC
Confidence 58999999999999999999999 8999999875
No 414
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=94.21 E-value=0.039 Score=55.62 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=31.6
Q ss_pred ccCCCeEEEECcchHHHHHHHHHHhcCCCCe-EEEEeCCH
Q 012596 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLK-VYMLMRDP 162 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~-V~v~~r~~ 162 (460)
||..++|.|||+|..|.++|..|++.| .+ |+++++.+
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G--~~~v~v~E~~~ 38 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAG--IGKVTLLESSS 38 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCC
Confidence 344579999999999999999999999 88 99999864
No 415
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=94.20 E-value=0.13 Score=48.78 Aligned_cols=44 Identities=18% Similarity=0.307 Sum_probs=36.6
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
++.+++.|.|+ |.+|.++|..|++.| ++|++.+|+.+.++.+.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 46 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAG--AKILLGARRQARIEAIAT 46 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 34567888885 789999999999999 999999999887766544
No 416
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.19 E-value=0.23 Score=52.39 Aligned_cols=43 Identities=5% Similarity=0.189 Sum_probs=40.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK 171 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~ 171 (460)
.++|.|+|+|.+|..++..|.+.| ++|++++.+++.++.+.+.
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~--~~vvvid~~~~~~~~~~~~ 169 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRN--HLFVVVTDNYDQALHLEEQ 169 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTT--CCEEEEESCHHHHHHHHHS
T ss_pred CCeEEEECCChHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHh
Confidence 578999999999999999999988 8999999999999888876
No 417
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.16 E-value=0.34 Score=47.73 Aligned_cols=99 Identities=9% Similarity=0.065 Sum_probs=60.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (460)
...+|.|+|+|.+|...+..+...| .+|++.++++++.+.+++.|....+.... ... ......+.. ...
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~--~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAKNCGADVTLVVDP--AKE--EESSIIERIRSAIGDLP 241 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEEEECCT--TTS--CHHHHHHHHHHHSSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHHHhCCCEEEcCcc--ccc--HHHHHHHHhccccCCCC
Confidence 3578999999999998888887778 78999999998888877766421100000 000 000111211 358
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
|+||-++.... .++...+.++++..++.+.
T Consensus 242 D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 242 NVTIDCSGNEK---CITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SEEEECSCCHH---HHHHHHHHSCTTCEEEECS
T ss_pred CEEEECCCCHH---HHHHHHHHHhcCCEEEEEe
Confidence 99999987642 2233334455666666553
No 418
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.10 E-value=0.026 Score=55.24 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=45.1
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
+.|+|.|.|+ |.+|..++..|++.| ++|++++|++.. .+. .++. ..+.-.++..++++++|+||
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~------~~~--~~~~-----~Dl~d~~~~~~~~~~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQG--RTVRGFDLRPSG------TGG--EEVV-----GSLEDGQALSDAIMGVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT--CCEEEEESSCCS------SCC--SEEE-----SCTTCHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC--CEEEEEeCCCCC------CCc--cEEe-----cCcCCHHHHHHHHhCCCEEE
Confidence 4689999997 999999999999999 999999998642 111 1100 00100123456678999999
Q ss_pred Eccc
Q 012596 205 HAMP 208 (460)
Q Consensus 205 laVp 208 (460)
.+..
T Consensus 83 h~A~ 86 (347)
T 4id9_A 83 HLGA 86 (347)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 8753
No 419
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.07 E-value=0.046 Score=54.92 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=32.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+.++|.|||+|..|.+.|..|++.| ++|+++++.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G--~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSG--IDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 3579999999999999999999999 8999999875
No 420
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.05 E-value=0.15 Score=49.53 Aligned_cols=97 Identities=19% Similarity=0.244 Sum_probs=61.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHh-cCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEE-eCCHHhh-cCCCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVAN-KKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA-TTDAKTA-LLGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~-~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a-~~~~~ea-~~~aDi 202 (460)
..++|..||+|..|.+ +..+++ .| ..|+.+|.+++.++..++..... + + .++.+ ..|..+. -..+|+
T Consensus 122 ~g~rVLDIGcG~G~~t-a~~lA~~~g--a~V~gIDis~~~l~~Ar~~~~~~----g--l-~~v~~v~gDa~~l~d~~FDv 191 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLT-GILLSHVYG--MRVNVVEIEPDIAELSRKVIEGL----G--V-DGVNVITGDETVIDGLEFDV 191 (298)
T ss_dssp TTCEEEEECCCSSCHH-HHHHHHTTC--CEEEEEESSHHHHHHHHHHHHHH----T--C-CSEEEEESCGGGGGGCCCSE
T ss_pred CcCEEEEECCCccHHH-HHHHHHccC--CEEEEEECCHHHHHHHHHHHHhc----C--C-CCeEEEECchhhCCCCCcCE
Confidence 4589999999985432 222343 35 79999999998776655431100 0 0 12332 2233332 246899
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEe
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
|+++.-......+++++...+++|..++..
T Consensus 192 V~~~a~~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 192 LMVAALAEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp EEECTTCSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEECCCccCHHHHHHHHHHHcCCCcEEEEE
Confidence 998755556678899999999998776543
No 421
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=94.01 E-value=0.23 Score=49.98 Aligned_cols=94 Identities=11% Similarity=0.171 Sum_probs=57.3
Q ss_pred CCeEEEEC-cchHHHHHHH-HHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 127 TNKVVVLG-GGSFGTAMAA-HVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~-~La~~G~-~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
.+|||||| .|..|.-|.+ .|.++.+ ..++.++..+. .|.....+.+..+ .+...+++++ +.++|+|
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~--------aG~~~~~~~~~~~--~v~~~~~~~~-~~~vDvv 72 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN--------AGGKAPSFAKNET--TLKDATSIDD-LKKCDVI 72 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC--------TTSBCCTTCCSCC--BCEETTCHHH-HHTCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh--------cCCCHHHcCCCce--EEEeCCChhH-hcCCCEE
Confidence 47999999 6999999999 6665531 13555554321 1221111222111 1232234444 5789999
Q ss_pred EEccchhcHHHHHHHhhhcCCCC--CeEEEecc
Q 012596 204 LHAMPVQFSSSFLEGISDYVDPG--LPFISLSK 234 (460)
Q Consensus 204 ilaVp~~~~~~vl~~i~~~l~~~--~iIV~~~~ 234 (460)
|+|+|.....++...+.+ .| .+||+++.
T Consensus 73 f~a~~~~~s~~~~~~~~~---~G~k~~VID~ss 102 (377)
T 3uw3_A 73 ITCQGGDYTNDVFPKLRA---AGWNGYWIDAAS 102 (377)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCCSEEEECSS
T ss_pred EECCChHHHHHHHHHHHH---CCCCEEEEeCCc
Confidence 999998877776665543 35 48899875
No 422
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=93.98 E-value=0.049 Score=54.78 Aligned_cols=35 Identities=20% Similarity=0.456 Sum_probs=32.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+.|+|+|||+|..|...|..|++.| ++|++++++.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g--~~v~v~E~~~ 36 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKG--HQVHIIDQRD 36 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCC--CcEEEEEecC
Confidence 3479999999999999999999998 9999999875
No 423
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.96 E-value=0.051 Score=54.52 Aligned_cols=34 Identities=29% Similarity=0.555 Sum_probs=31.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
.++|.|||+|..|.++|..|++.| .+|+++++.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNG--IDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT--CEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCC
Confidence 468999999999999999999999 8999999865
No 424
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.92 E-value=0.047 Score=54.07 Aligned_cols=34 Identities=26% Similarity=0.513 Sum_probs=31.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
..+|.|||+|..|.+.|..|+++| ++|+++++..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G--~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRG--EEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 468999999999999999999999 8999999863
No 425
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.91 E-value=0.065 Score=51.58 Aligned_cols=35 Identities=17% Similarity=0.408 Sum_probs=32.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+.++|.|||+|.+|..-+..|.+.| ++|++++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~G--a~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTG--CKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGT--CEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCC--CEEEEEcCCC
Confidence 3589999999999999999999999 9999998754
No 426
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=93.89 E-value=0.055 Score=52.09 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=29.1
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~ 163 (460)
.|+|.|.|+ |.+|..++..|++.| ++|++++|++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~ 37 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN--WHAVGCGFRRA 37 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT--CEEEEEC----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC--CeEEEEccCCC
Confidence 478999997 999999999999999 99999998754
No 427
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=93.88 E-value=0.044 Score=53.09 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+++|.|||+|..|.++|..|+++| .+|+++++.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G--~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCC--CcEEEEECCC
Confidence 368999999999999999999999 8999999864
No 428
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=93.86 E-value=0.037 Score=54.18 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=30.8
Q ss_pred CCeEEEECcchHHHHHHHHHHh---cCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVAN---KKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~---~G~~~~V~v~~r~~ 162 (460)
|++|+|||+|..|.+.|..|++ +| ++|+++++.+
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G--~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGP--LYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CC--EEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCC--ceEEEEECCC
Confidence 3689999999999999999999 88 8999999763
No 429
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.83 E-value=0.67 Score=45.66 Aligned_cols=92 Identities=10% Similarity=0.078 Sum_probs=59.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeC-----CHHhhc--
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT-----DAKTAL-- 197 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~-----~~~ea~-- 197 (460)
...+|.|+|+|.+|...+..+...| . +|++.++++++.+.+++.|.... .... +..+.+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~v-----------i~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMG--AAQVVVTDLSATRLSKAKEIGADLV-----------LQISKESPQEIARKVEG 237 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTTCSEE-----------EECSSCCHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHhCCCEE-----------EcCcccccchHHHHHHH
Confidence 3578999999999998888777777 6 89999999988887777664210 0011 111111
Q ss_pred ---CCCcEEEEccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 198 ---LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 198 ---~~aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
..+|+||-++.... .++...+.++++..++.+.
T Consensus 238 ~~~~g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 238 QLGCKPEVTIECTGAEA---SIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHTSCCSEEEECSCCHH---HHHHHHHHSCTTCEEEECS
T ss_pred HhCCCCCEEEECCCChH---HHHHHHHHhcCCCEEEEEe
Confidence 36899999987542 2233334455666666553
No 430
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.80 E-value=0.045 Score=56.72 Aligned_cols=49 Identities=16% Similarity=0.148 Sum_probs=30.2
Q ss_pred cceeeeeccccchhccCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCC
Q 012596 110 RWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~ 161 (460)
+|++.+-.....+.| +..+|.|||+|.-|...|..|++.| ++|+++++.
T Consensus 9 ~~~~~~~~n~~~~~m-~~~dVvVIGgG~aGl~aA~~la~~G--~~V~liEk~ 57 (491)
T 3urh_A 9 SGVDLGTENLYFQSM-MAYDLIVIGSGPGGYVCAIKAAQLG--MKVAVVEKR 57 (491)
T ss_dssp ------------------CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESS
T ss_pred cccccCcCCcchhhc-ccCCEEEECCCHHHHHHHHHHHHCC--CeEEEEecC
Confidence 344444433333333 2367999999999999999999999 899999975
No 431
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.78 E-value=0.045 Score=56.50 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=31.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
|++|.|||+|.-|..-|..|+++| ++|+++.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G--~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAG--IPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTT--CCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC--CcEEEEccCC
Confidence 578999999999999999999999 9999998865
No 432
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.75 E-value=0.13 Score=46.05 Aligned_cols=45 Identities=13% Similarity=0.175 Sum_probs=38.1
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhc
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH 172 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g 172 (460)
..++|.|+| +|.+|.+++..+...| .+|++.++++++.+.+++.|
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~~g 83 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLSRLG 83 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHTTC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHcC
Confidence 357899999 6999999999999888 89999999988777665544
No 433
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.75 E-value=0.046 Score=54.57 Aligned_cols=34 Identities=41% Similarity=0.602 Sum_probs=31.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
..+|.|||+|..|.+.|..|+++| .+|+++++..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G--~~V~vlE~~~ 37 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERG--HRVLVLERHT 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 468999999999999999999999 8999999864
No 434
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=93.73 E-value=0.029 Score=58.73 Aligned_cols=63 Identities=24% Similarity=0.213 Sum_probs=45.7
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEEE
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (460)
+|||.|.| .|.+|+.++..|.+.| ++|++++|+....+ .. . .+ + .+...++++++|+||.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G--~~V~~l~R~~~~~~-----~v--~--~d--~------~~~~~~~l~~~D~Vih 207 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG--HEVIQLVRKEPKPG-----KR--F--WD--P------LNPASDLLDGADVLVH 207 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESSSCCTT-----CE--E--CC--T------TSCCTTTTTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCCCCcc-----ce--e--ec--c------cchhHHhcCCCCEEEE
Confidence 78999999 6999999999999999 99999999864211 00 0 00 0 1123456788999998
Q ss_pred ccc
Q 012596 206 AMP 208 (460)
Q Consensus 206 aVp 208 (460)
+..
T Consensus 208 ~A~ 210 (516)
T 3oh8_A 208 LAG 210 (516)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 435
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=93.64 E-value=0.29 Score=45.96 Aligned_cols=42 Identities=19% Similarity=0.170 Sum_probs=35.3
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~ 169 (460)
+.+++.|.| .|.+|.+++..|++.| ++|++.+|+.+..+.+.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 48 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKG--AKVALVDWNLEAGVQCK 48 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH
Confidence 446788998 5899999999999999 99999999987665443
No 436
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.62 E-value=0.15 Score=50.19 Aligned_cols=93 Identities=15% Similarity=0.073 Sum_probs=60.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc------C
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL------L 198 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~------~ 198 (460)
...+|.|+|+|.+|...+..+...| . +|++.++++++.+.+++.|..... +.. ..+..+.+ .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G--a~~Vi~~~~~~~~~~~~~~~Ga~~~~--~~~-------~~~~~~~v~~~~~g~ 235 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG--AYPVIVSEPSDFRRELAKKVGADYVI--NPF-------EEDVVKEVMDITDGN 235 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT--CCSEEEECSCHHHHHHHHHHTCSEEE--CTT-------TSCHHHHHHHHTTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHhCCCEEE--CCC-------CcCHHHHHHHHcCCC
Confidence 4578999999999999999888888 7 899999999888877776642110 000 01222211 2
Q ss_pred CCcEEEEccch-hcHHHHHHHhhhcCCCCCeEEEec
Q 012596 199 GADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 199 ~aDiVilaVp~-~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
.+|+||-++.. ..+...++ .++++..++.+.
T Consensus 236 g~D~vid~~g~~~~~~~~~~----~l~~~G~iv~~g 267 (348)
T 2d8a_A 236 GVDVFLEFSGAPKALEQGLQ----AVTPAGRVSLLG 267 (348)
T ss_dssp CEEEEEECSCCHHHHHHHHH----HEEEEEEEEECC
T ss_pred CCCEEEECCCCHHHHHHHHH----HHhcCCEEEEEc
Confidence 58999999875 33444443 334444555543
No 437
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=93.59 E-value=0.071 Score=54.75 Aligned_cols=86 Identities=15% Similarity=0.211 Sum_probs=53.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-------------------HHHHHHHhh--cCCCccCCCCCC--
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------------------AVCQSINEK--HCNCRYFPEQKL-- 183 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~-------------------~~~~~l~~~--g~~~~~~~~~~l-- 183 (460)
..||.|||+|.+|+.++..|+++|. -+++++|.+. .+++.+.+. ..+ |+..+
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGv-g~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~ln----p~v~v~~ 114 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGF-RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRV----PNCNVVP 114 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTC-CCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHS----TTCCCEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC-CEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhC----CCCEEEE
Confidence 5799999999999999999999996 3799997543 122222211 001 11111
Q ss_pred -CCceEEeCCHHhhcCCCcEEEEccchhcHHHHHHHh
Q 012596 184 -PENVIATTDAKTALLGADYCLHAMPVQFSSSFLEGI 219 (460)
Q Consensus 184 -~~~i~a~~~~~ea~~~aDiVilaVp~~~~~~vl~~i 219 (460)
+..+ .....+.++++|+||.|+-....+..++..
T Consensus 115 ~~~~i--~~~~~~~~~~~DlVi~~~Dn~~~R~~in~~ 149 (434)
T 1tt5_B 115 HFNKI--QDFNDTFYRQFHIIVCGLDSIIARRWINGM 149 (434)
T ss_dssp EESCG--GGBCHHHHTTCSEEEECCSCHHHHHHHHHH
T ss_pred Eeccc--chhhHHHhcCCCEEEECCCCHHHHHHHHHH
Confidence 0001 111135678899999998877666555544
No 438
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=93.57 E-value=0.12 Score=54.33 Aligned_cols=43 Identities=30% Similarity=0.376 Sum_probs=36.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK 171 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~ 171 (460)
.+++.|+|+|.+|.+++..|++.| .+|++++|+.++++.+.+.
T Consensus 364 ~k~vlV~GaGGig~aia~~L~~~G--~~V~i~~R~~~~a~~la~~ 406 (523)
T 2o7s_A 364 SKTVVVIGAGGAGKALAYGAKEKG--AKVVIANRTYERALELAEA 406 (523)
T ss_dssp --CEEEECCSHHHHHHHHHHHHHC--C-CEEEESSHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHH
Confidence 467999999999999999999999 7899999999888877654
No 439
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.56 E-value=0.058 Score=54.98 Aligned_cols=33 Identities=12% Similarity=0.347 Sum_probs=31.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
++|.|||+|..|...|..|+++| ++|+++++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G--~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHD--VDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTT--CEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--CeEEEEcCCC
Confidence 68999999999999999999999 9999999765
No 440
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=93.51 E-value=0.14 Score=53.11 Aligned_cols=68 Identities=15% Similarity=0.202 Sum_probs=48.0
Q ss_pred ccCCCeEEEECcchHHHH-HHHHHHhcCCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCc
Q 012596 124 LERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (460)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~v~~r~~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (460)
|.+.+||.|||.|..|.+ +|..|.+.| ++|+++|.... ..+.+.+.|... ..-.+.+ .+.++|
T Consensus 15 ~~~~~~i~viG~G~sG~s~~A~~l~~~G--~~V~~~D~~~~~~~~~l~~~gi~~------------~~g~~~~-~~~~a~ 79 (475)
T 1p3d_A 15 MRRVQQIHFIGIGGAGMSGIAEILLNEG--YQISGSDIADGVVTQRLAQAGAKI------------YIGHAEE-HIEGAS 79 (475)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHT--CEEEEEESCCSHHHHHHHHTTCEE------------EESCCGG-GGTTCS
T ss_pred cccCCEEEEEeecHHHHHHHHHHHHhCC--CEEEEECCCCCHHHHHHHhCCCEE------------ECCCCHH-HcCCCC
Confidence 334679999999999997 999999999 99999998643 345565555321 1112332 356889
Q ss_pred EEEEc
Q 012596 202 YCLHA 206 (460)
Q Consensus 202 iVila 206 (460)
+||+.
T Consensus 80 ~vv~s 84 (475)
T 1p3d_A 80 VVVVS 84 (475)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 98885
No 441
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=93.46 E-value=0.43 Score=44.46 Aligned_cols=121 Identities=11% Similarity=0.159 Sum_probs=71.6
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~-v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
.||..|+|+ |.||..++....+.+ +++. .+++... ++ +.++|++|
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~~~--~elv~~id~~~~---------------------------~~----l~~~DVvI 58 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSEKG--HELVLKVDVNGV---------------------------EE----LDSPDVVI 58 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEEETTEE---------------------------EE----CSCCSEEE
T ss_pred cceeEEEEecCHHHHHHHHHHhCCC--CEEEEEEcCCCc---------------------------cc----ccCCCEEE
Confidence 589999998 999999988766666 6755 4454320 11 24689999
Q ss_pred -EccchhcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012596 205 -HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (460)
Q Consensus 205 -laVp~~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~~lg~~~~~~~v~~gP~~a~e~~~g~~~~i~i~~ 283 (460)
++.|.. +.+.++...+ .+..+|..++|+..+.. +.+.+. .. ...++..|++..-+..
T Consensus 59 DFT~P~a-~~~~~~~~~~---~g~~~ViGTTG~~~~~~----~~l~~~-a~---~~~vv~apNfSlGvnl---------- 116 (228)
T 1vm6_A 59 DFSSPEA-LPKTVDLCKK---YRAGLVLGTTALKEEHL----QMLREL-SK---EVPVVQAYNFSIGINV---------- 116 (228)
T ss_dssp ECSCGGG-HHHHHHHHHH---HTCEEEECCCSCCHHHH----HHHHHH-TT---TSEEEECSCCCHHHHH----------
T ss_pred ECCCHHH-HHHHHHHHHH---cCCCEEEeCCCCCHHHH----HHHHHH-Hh---hCCEEEeccccHHHHH----------
Confidence 666653 3333333222 36778888889887532 223332 11 1467888887652210
Q ss_pred CCHHHHHHHHHHHhcCCceEEE
Q 012596 284 KDRKLANAVQQLLASKHLRIST 305 (460)
Q Consensus 284 ~d~~~~~~l~~lL~~~g~~v~~ 305 (460)
-....+.+.++|. ++.++.
T Consensus 117 -l~~l~~~aA~~l~--~ydiEI 135 (228)
T 1vm6_A 117 -LKRFLSELVKVLE--DWDVEI 135 (228)
T ss_dssp -HHHHHHHHHHHTT--TSEEEE
T ss_pred -HHHHHHHHHHhcC--CCCEEE
Confidence 0244566777774 445443
No 442
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=93.40 E-value=0.013 Score=58.73 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=26.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhc--CCCCeEE-EEeC
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANK--KSQLKVY-MLMR 160 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~--G~~~~V~-v~~r 160 (460)
+++||+|||+|.||..++..|.+. |.+.+|+ ++++
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 457999999999999999999885 2123554 4454
No 443
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.40 E-value=0.07 Score=53.47 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=31.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
.++|.|||+|..|.++|..|++.| .+|+++++.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAG--VDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CCEEEEecCC
Confidence 479999999999999999999999 8999999764
No 444
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.38 E-value=0.063 Score=54.13 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=30.9
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
|+|.|||+|..|.+.|..|+++| ++|+++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNG--HEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 68999999999999999999999 9999999864
No 445
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.36 E-value=0.06 Score=53.26 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=31.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
..+|.|||+|..|.+.|..|+++| ++|+++++..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G--~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQG--VKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCC
Confidence 468999999999999999999999 8999999763
No 446
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.34 E-value=0.48 Score=47.01 Aligned_cols=94 Identities=11% Similarity=0.004 Sum_probs=58.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (460)
..+|.|+|+|.+|...+..+...| . .|++.++++++.+.+++.|..... . ... ...+..+.+ ..+
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi-~---~~~---~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAG--ASRIIGVGTHKDKFPKAIELGATECL-N---PKD---YDKPIYEVICEKTNGGV 262 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHHTTCSEEE-C---GGG---CSSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEECCCHHHHHHHHHcCCcEEE-e---ccc---ccchHHHHHHHHhCCCC
Confidence 478999999999998888777777 6 799999999888877776642110 0 000 001222222 258
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCC-CeEEEe
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPG-LPFISL 232 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~-~iIV~~ 232 (460)
|+||-++.... .++...+.++++ ..++.+
T Consensus 263 Dvvid~~g~~~---~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAGRIE---TMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSCCHH---HHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCHH---HHHHHHHHHhcCCCEEEEE
Confidence 99999987532 223333445555 555554
No 447
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.31 E-value=0.064 Score=51.95 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=31.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
++++|.|||+|.-|...|..|++.| ++|+++++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRG--LSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 3578999999999999999999998 8999999864
No 448
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.27 E-value=0.057 Score=54.21 Aligned_cols=33 Identities=30% Similarity=0.469 Sum_probs=30.9
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
.+|.|||+|..|...|..|++.| .+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G--~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSG--FKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--CCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 68999999999999999999999 8999999864
No 449
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.23 E-value=0.28 Score=48.70 Aligned_cols=45 Identities=13% Similarity=0.038 Sum_probs=39.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHC 173 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~ 173 (460)
..+|.|+|+|.+|.+.+..+...| .+|++.++++++.+.+++.|.
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa 234 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAFALGA 234 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHHHcCC
Confidence 478999999999999888888888 899999999988888777664
No 450
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.21 E-value=0.073 Score=52.90 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=31.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
.++|.|||+|..|..+|..|++.| .+|+++++.+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G--~~v~viE~~~ 44 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNG--WDVRLHEKSS 44 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CCEEEEecCC
Confidence 479999999999999999999999 8999999864
No 451
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=93.21 E-value=0.05 Score=52.90 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=32.1
Q ss_pred CeEEEECc-chHHHHHHHHHHhc-CCCCeEEEEeCCHHHH
Q 012596 128 NKVVVLGG-GSFGTAMAAHVANK-KSQLKVYMLMRDPAVC 165 (460)
Q Consensus 128 ~kI~IIGa-G~mG~~~A~~La~~-G~~~~V~v~~r~~~~~ 165 (460)
|||.|.|+ |.+|..++..|.+. | ++|++++|+.+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~ 38 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAI 38 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGG
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC--CEEEEEeCCcchH
Confidence 68999997 99999999999998 7 8999999987543
No 452
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.18 E-value=0.57 Score=46.51 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=58.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (460)
..+|.|+|+|.+|...+..+...| . .|+..++++++.+.+++.|..... . ... ...+..+.+ ..+
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi-~---~~~---~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAG--ASRIIAIDINGEKFPKAKALGATDCL-N---PRE---LDKPVQDVITELTAGGV 266 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCSEEE-C---GGG---CSSCHHHHHHHHHTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHhCCcEEE-c---ccc---ccchHHHHHHHHhCCCc
Confidence 468999999999998888777777 6 799999999888877776642110 0 000 001222222 258
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCC-CeEEEe
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPG-LPFISL 232 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~-~iIV~~ 232 (460)
|+||-++.... .++...+.++++ ..++.+
T Consensus 267 Dvvid~~G~~~---~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 267 DYSLDCAGTAQ---TLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SEEEESSCCHH---HHHHHHHTBCTTTCEEEEC
T ss_pred cEEEECCCCHH---HHHHHHHHhhcCCCEEEEE
Confidence 99999887532 223333445555 555554
No 453
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.09 E-value=0.3 Score=47.93 Aligned_cols=92 Identities=13% Similarity=0.046 Sum_probs=59.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh----cCCCc
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA----LLGAD 201 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea----~~~aD 201 (460)
...+|.|+|+|.+|...+..+...| .+|++.++++++.+.+++.|.... + + .. ..+..+. ...+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~-~-d--~~-----~~~~~~~~~~~~~~~d 232 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAKELGADLV-V-N--PL-----KEDAAKFMKEKVGGVH 232 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTCSEE-E-C--TT-----TSCHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHCCCCEE-e-c--CC-----CccHHHHHHHHhCCCC
Confidence 3579999999999999999888888 899999999988887776554210 0 0 00 0122211 14689
Q ss_pred EEEEccch-hcHHHHHHHhhhcCCCCCeEEEe
Q 012596 202 YCLHAMPV-QFSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 202 iVilaVp~-~~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
+||-++.. ..+...++ .++++..++.+
T Consensus 233 ~vid~~g~~~~~~~~~~----~l~~~G~~v~~ 260 (339)
T 1rjw_A 233 AAVVTAVSKPAFQSAYN----SIRRGGACVLV 260 (339)
T ss_dssp EEEESSCCHHHHHHHHH----HEEEEEEEEEC
T ss_pred EEEECCCCHHHHHHHHH----HhhcCCEEEEe
Confidence 99998875 33333333 33444455544
No 454
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=93.09 E-value=0.78 Score=39.59 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=59.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc----CCCcE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL----LGADY 202 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~----~~aDi 202 (460)
..+|.-||+|. | .++..+++...+.+|+.+|.+++.++..++.-.. ..++.++....+..+.+ ...|+
T Consensus 26 ~~~vldiG~G~-G-~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~D~ 97 (178)
T 3hm2_A 26 HETLWDIGGGS-G-SIAIEWLRSTPQTTAVCFEISEERRERILSNAIN------LGVSDRIAVQQGAPRAFDDVPDNPDV 97 (178)
T ss_dssp TEEEEEESTTT-T-HHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHT------TTCTTSEEEECCTTGGGGGCCSCCSE
T ss_pred CCeEEEeCCCC-C-HHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHH------hCCCCCEEEecchHhhhhccCCCCCE
Confidence 46899999997 4 4555666551127899999999877666543110 00111222222321222 56899
Q ss_pred EEEccchhcHHHHHHHhhhcCCCCCeEEEe
Q 012596 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 203 VilaVp~~~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
|++.-.... ..+++++...++++..++..
T Consensus 98 i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 98 IFIGGGLTA-PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp EEECC-TTC-TTHHHHHHHTCCTTCEEEEE
T ss_pred EEECCcccH-HHHHHHHHHhcCCCCEEEEE
Confidence 998766554 66788888888888776543
No 455
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=93.07 E-value=0.13 Score=49.97 Aligned_cols=33 Identities=15% Similarity=0.341 Sum_probs=29.6
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCC
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRD 161 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~ 161 (460)
||+|.|.| .|.+|..++..|++.| ++|++++|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~ 34 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQG--IDLIVFDNL 34 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCC--CEEEEEeCC
Confidence 47899999 6999999999999999 999999874
No 456
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=93.06 E-value=0.26 Score=51.84 Aligned_cols=35 Identities=9% Similarity=0.119 Sum_probs=31.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
..+|.|||+|.+|+.++..|+.+|. ..++++|.+.
T Consensus 32 ~~~VlvvG~GGlGseiak~La~aGV-g~itlvD~D~ 66 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLPGI-GSFTIIDGNQ 66 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTTTC-SEEEEECCCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 4799999999999999999999996 4799999765
No 457
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.99 E-value=0.62 Score=46.22 Aligned_cols=93 Identities=9% Similarity=0.035 Sum_probs=58.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (460)
..+|.|+|+|.+|...+..+...| . .|++.++++++.+.+++.|..... . ... ...+..+.+ ..+
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi-~---~~~---~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAG--AARIIGVDINKDKFAKAKEVGATECV-N---PQD---YKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCSEEE-C---GGG---CSSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHhCCceEe-c---ccc---cchhHHHHHHHHhCCCC
Confidence 478999999999999888887777 6 799999999888877766642110 0 000 001222211 258
Q ss_pred cEEEEccchh-cHHHHHHHhhhcCCCC-CeEEEe
Q 012596 201 DYCLHAMPVQ-FSSSFLEGISDYVDPG-LPFISL 232 (460)
Q Consensus 201 DiVilaVp~~-~~~~vl~~i~~~l~~~-~iIV~~ 232 (460)
|+||-++... .+... .+.++++ ..++.+
T Consensus 263 D~vid~~g~~~~~~~~----~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIGRLDTMVTA----LSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSCCHHHHHHH----HHHBCTTTCEEEEC
T ss_pred cEEEECCCCHHHHHHH----HHHhhcCCcEEEEe
Confidence 9999998753 33333 3444555 555554
No 458
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.96 E-value=0.081 Score=53.14 Aligned_cols=33 Identities=33% Similarity=0.377 Sum_probs=30.9
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
|+|.|||+|..|.+.|..|+++| ++|++++++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAG--HEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--CceEEEeCCC
Confidence 68999999999999999999999 9999999864
No 459
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.93 E-value=0.056 Score=53.19 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.5
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
-.|.|||+|..|.+.|..|+++| ++|++++|.+
T Consensus 5 yDViIVGaGpaGl~~A~~La~~G--~~V~v~Er~~ 37 (397)
T 3oz2_A 5 YDVLVVGGGPGGSTAARYAAKYG--LKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCC
Confidence 35999999999999999999999 9999999864
No 460
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=92.93 E-value=0.59 Score=43.58 Aligned_cols=43 Identities=19% Similarity=0.253 Sum_probs=36.1
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
+.+++.|.|+ |.+|.++|..|++.| ++|++.+|+.+..+++.+
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 54 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYG--ATVILLGRNEEKLRQVAS 54 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 4567888885 789999999999999 899999999887665543
No 461
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=92.89 E-value=0.061 Score=53.30 Aligned_cols=34 Identities=38% Similarity=0.559 Sum_probs=31.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
..+|.|||+|..|...|..|++.| .+|+++++.+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G--~~V~l~E~~~ 37 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYG--LKTLMIEKRP 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCC
Confidence 368999999999999999999999 8999999876
No 462
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=92.89 E-value=0.099 Score=56.12 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=31.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
..+|.|||+|.+|+.++..|++.|. -.++++|.+.
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGV-G~ItlvD~D~ 51 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGF-SHIDLIDLDT 51 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEECCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCC-CeEEEecCCE
Confidence 4799999999999999999999996 3799999764
No 463
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=92.85 E-value=0.65 Score=43.59 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=34.8
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~ 169 (460)
.++|.|.| .|.+|.+++..|++.| ++|++.+|+++..+.+.
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 54 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEG--AKLSLVDVSSEGLEASK 54 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 46788887 6899999999999999 99999999987665544
No 464
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=92.83 E-value=0.79 Score=44.11 Aligned_cols=95 Identities=8% Similarity=0.012 Sum_probs=61.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEE-eCCHHhhcCCCcEEE
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA-TTDAKTALLGADYCL 204 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~-G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a-~~~~~ea~~~aDiVi 204 (460)
..+|.-||+|. |. ++..|++. | .+|+.+|.+++.++..++.... ..+..++.+ ..|..+.-...|+|+
T Consensus 91 ~~~vLDiGcG~-G~-~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~------~~~~~~v~~~~~d~~~~~~~fD~v~ 160 (318)
T 2fk8_A 91 GMTLLDIGCGW-GT-TMRRAVERFD--VNVIGLTLSKNQHARCEQVLAS------IDTNRSRQVLLQGWEDFAEPVDRIV 160 (318)
T ss_dssp TCEEEEESCTT-SH-HHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHT------SCCSSCEEEEESCGGGCCCCCSEEE
T ss_pred cCEEEEEcccc-hH-HHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHh------cCCCCceEEEECChHHCCCCcCEEE
Confidence 47899999998 43 44555554 7 7999999999877666553110 001112322 234444335689999
Q ss_pred Ec-----cchhcHHHHHHHhhhcCCCCCeEEE
Q 012596 205 HA-----MPVQFSSSFLEGISDYVDPGLPFIS 231 (460)
Q Consensus 205 la-----Vp~~~~~~vl~~i~~~l~~~~iIV~ 231 (460)
.. ++......+++++...+++|..++.
T Consensus 161 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 161 SIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 87 4445567788999999998776544
No 465
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.81 E-value=0.64 Score=46.04 Aligned_cols=94 Identities=12% Similarity=0.078 Sum_probs=59.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (460)
..+|.|+|+|.+|...+..+...| . .|+..++++++.+.+++.|..... . ... ...+..+.+ ..+
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi-~---~~~---~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAG--ASRIIGVDINKDKFARAKEFGATECI-N---PQD---FSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHHHTCSEEE-C---GGG---CSSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHcCCceEe-c---ccc---ccccHHHHHHHHhCCCC
Confidence 468999999999999888887778 6 799999999888877776642110 0 000 001222222 258
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCC-CeEEEe
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPG-LPFISL 232 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~-~iIV~~ 232 (460)
|+||-++.... .++...+.++++ ..++.+
T Consensus 262 D~vid~~g~~~---~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 262 DYSFECIGNVK---VMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SEEEECSCCHH---HHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCcHH---HHHHHHHhhccCCcEEEEE
Confidence 99999987532 223334445555 555554
No 466
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.80 E-value=0.23 Score=48.63 Aligned_cols=92 Identities=20% Similarity=0.070 Sum_probs=59.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc----CCCc
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL----LGAD 201 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~----~~aD 201 (460)
...+|.|+|+|.+|...+..+...| .+|+..++++++.+.+++.|........ ..+..+.+ ...|
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~i~~~---------~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLARRLGAEVAVNAR---------DTDPAAWLQKEIGGAH 234 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEEEETT---------TSCHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCEEEeCC---------CcCHHHHHHHhCCCCC
Confidence 3578999999999999888888888 8999999999988888776642110000 01222222 3678
Q ss_pred EEEEccchh-cHHHHHHHhhhcCCCCCeEEEe
Q 012596 202 YCLHAMPVQ-FSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 202 iVilaVp~~-~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
+||.++... .+...+ +.++++..++.+
T Consensus 235 ~vid~~g~~~~~~~~~----~~l~~~G~iv~~ 262 (340)
T 3s2e_A 235 GVLVTAVSPKAFSQAI----GMVRRGGTIALN 262 (340)
T ss_dssp EEEESSCCHHHHHHHH----HHEEEEEEEEEC
T ss_pred EEEEeCCCHHHHHHHH----HHhccCCEEEEe
Confidence 998887643 233333 334444555544
No 467
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=92.80 E-value=0.069 Score=52.81 Aligned_cols=91 Identities=14% Similarity=0.148 Sum_probs=54.2
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCC-CeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeC-CHHhhcCCCcEEE
Q 012596 128 NKVVVLG-GGSFGTAMAAHVANKKSQ-LKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT-DAKTALLGADYCL 204 (460)
Q Consensus 128 ~kI~IIG-aG~mG~~~A~~La~~G~~-~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~-~~~ea~~~aDiVi 204 (460)
|||+|+| .|.+|..+.+.|.+.++. .++..+.... ..|.... +.+ ..+.+.+ ++.+ . ++|+||
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~-------~~g~~l~-~~g----~~i~v~~~~~~~-~-~~DvV~ 66 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPR-------SAGVRLA-FRG----EEIPVEPLPEGP-L-PVDLVL 66 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGG-------GSSCEEE-ETT----EEEEEEECCSSC-C-CCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccc-------cCCCEEE-EcC----ceEEEEeCChhh-c-CCCEEE
Confidence 6899999 999999999999876621 2233322111 1121111 111 1122221 3333 4 899999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEeccC
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~~G 235 (460)
.|++.....+...... +.|..+|+++.-
T Consensus 67 ~a~g~~~s~~~a~~~~---~~G~~vId~s~~ 94 (331)
T 2yv3_A 67 ASAGGGISRAKALVWA---EGGALVVDNSSA 94 (331)
T ss_dssp ECSHHHHHHHHHHHHH---HTTCEEEECSSS
T ss_pred ECCCccchHHHHHHHH---HCCCEEEECCCc
Confidence 9999877666655543 357888988753
No 468
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=92.77 E-value=0.4 Score=44.55 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=36.1
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
.+++.|.|+ |.+|..+|..|++.| ++|++++|+.+..+.+.+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 51 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREG--AAVVVADINAEAAEAVAK 51 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH
Confidence 467888895 899999999999999 999999999887766554
No 469
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.76 E-value=0.094 Score=53.10 Aligned_cols=34 Identities=29% Similarity=0.603 Sum_probs=31.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~ 162 (460)
..+|.|||+|..|.+.|..|+++| + +|+++++..
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G--~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRG--YTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTT--CCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcC--CCcEEEEeCCC
Confidence 458999999999999999999999 8 999999865
No 470
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.75 E-value=0.43 Score=47.41 Aligned_cols=94 Identities=12% Similarity=0.087 Sum_probs=58.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (460)
..+|.|+|+|.+|...+..+...| . .|+..++++++.+.+++.|..... + ... ...+..+.+ ..+
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi--~--~~~---~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAG--AKRIIAVDLNPDKFEKAKVFGATDFV--N--PND---HSEPISQVLSKMTNGGV 263 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCCEEE--C--GGG---CSSCHHHHHHHHHTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHHhCCceEE--e--ccc---cchhHHHHHHHHhCCCC
Confidence 468999999999999888887777 6 799999999888877776642110 0 000 001222222 258
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCC-CeEEEe
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPG-LPFISL 232 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~-~iIV~~ 232 (460)
|+||-++.... .++...+.++++ ..++.+
T Consensus 264 D~vid~~g~~~---~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 264 DFSLECVGNVG---VMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SEEEECSCCHH---HHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCHH---HHHHHHHHhhcCCcEEEEE
Confidence 99999887532 223334445555 555554
No 471
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=92.75 E-value=0.085 Score=52.10 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=31.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+.+|.|||+|..|...|..|+++| .+|+++++..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G--~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKEN--KNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC--CcEEEEeCCC
Confidence 468999999999999999999999 8999999863
No 472
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=92.73 E-value=0.041 Score=55.64 Aligned_cols=80 Identities=10% Similarity=0.114 Sum_probs=56.1
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcE
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~~---~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (460)
..||.|||+ |..|..-+..+..-| . +|++||++.. ..|.. .++ +.++|+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lG--a~~~~V~v~D~~~~------~~g~~------------------~~~-i~~aDi 266 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVG--IPDANILKWDIKET------SRGGP------------------FDE-IPQADI 266 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTT--CCGGGEEEECHHHH------TTCSC------------------CTH-HHHSSE
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCC--CCcCceEEeecccc------ccCCc------------------hhh-HhhCCE
Confidence 468999999 999999999999888 6 8999998762 11210 123 568999
Q ss_pred EEEccchhc-HHHH-HHHhhhcC-CCCCeEEEec
Q 012596 203 CLHAMPVQF-SSSF-LEGISDYV-DPGLPFISLS 233 (460)
Q Consensus 203 VilaVp~~~-~~~v-l~~i~~~l-~~~~iIV~~~ 233 (460)
||-|+.... ...+ -++..+.+ +++.+||+++
T Consensus 267 vIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 267 FINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp EEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred EEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 999997421 1111 12333456 7899999986
No 473
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=92.71 E-value=0.5 Score=43.69 Aligned_cols=42 Identities=19% Similarity=0.214 Sum_probs=35.7
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
.+++.|.| .|.+|..++..|++.| ++|++.+|+++..+.+.+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G--~~v~~~~r~~~~~~~~~~ 47 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKG--ATVVGTATSQASAEKFEN 47 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 46788888 4889999999999999 999999999887665544
No 474
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=92.66 E-value=0.47 Score=44.03 Aligned_cols=41 Identities=20% Similarity=0.236 Sum_probs=34.6
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012596 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (460)
Q Consensus 127 ~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~ 169 (460)
.++|.|.| .|.+|..++..|++.| ++|++.+|+.+..+.+.
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 54 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAG--ARVIIADLDEAMATKAV 54 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 46788888 5899999999999999 99999999987655443
No 475
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.65 E-value=0.082 Score=51.86 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=31.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~ 162 (460)
.++|.|||+|..|...|..|++.| + +|+++++++
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g--~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFG--ITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcC--CCcEEEEecCC
Confidence 468999999999999999999998 8 899999875
No 476
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.65 E-value=0.48 Score=46.15 Aligned_cols=44 Identities=16% Similarity=0.125 Sum_probs=38.3
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhc
Q 012596 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH 172 (460)
Q Consensus 127 ~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g 172 (460)
..+|.|.|+ |.+|.+++..+...| .+|++.++++++.+.+++.|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~~g 190 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKG--CKVVGAAGSDEKIAYLKQIG 190 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTT
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhcC
Confidence 478999998 999999999999998 89999999988887775544
No 477
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=92.64 E-value=0.094 Score=51.90 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=29.2
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCCC-eEEEEeC
Q 012596 128 NKVVVLG-GGSFGTAMAAHVANKKSQL-KVYMLMR 160 (460)
Q Consensus 128 ~kI~IIG-aG~mG~~~A~~La~~G~~~-~V~v~~r 160 (460)
|||.|.| .|.+|..++..|.+.| + +|+..||
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g--~~~v~~~d~ 33 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT--DHHIFEVHR 33 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEECCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEECC
Confidence 6899999 6999999999999999 7 9999998
No 478
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=92.63 E-value=0.64 Score=42.85 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=36.7
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
+.+++.|.|+ |.+|.+++..|++.| ++|++.+|+.+..+.+.+
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~ 56 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHG--ASVVLLGRTEASLAEVSD 56 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEEecCHHHHHHHHH
Confidence 4578899995 899999999999999 899999999887765544
No 479
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=92.62 E-value=0.36 Score=44.63 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=35.6
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~ 169 (460)
+.++|.|.|+ |.+|..++..|++.| ++|++.+|+.+..+.+.
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 52 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAG--ASVVVSDINADAANHVV 52 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTT--CEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH
Confidence 3578999985 899999999999999 99999999987665543
No 480
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=92.60 E-value=0.075 Score=51.51 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=31.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+.+|.|||+|..|...|..|++.| ++|+++++.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g--~~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSG--LSYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSS--CCEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCC
Confidence 468999999999999999999999 8999999875
No 481
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=92.57 E-value=0.35 Score=45.05 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=35.3
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHh-cCCCCeEEEEeCCHHHHHHHH
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVAN-KKSQLKVYMLMRDPAVCQSIN 169 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~-~G~~~~V~v~~r~~~~~~~l~ 169 (460)
++++|.|.| .|.+|..++..|++ .| ++|++.+|+.+..+.+.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g--~~V~~~~r~~~~~~~~~ 46 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFS--GDVVLTARDVTRGQAAV 46 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSS--SEEEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcC--CeEEEEeCChHHHHHHH
Confidence 457788888 58999999999999 89 89999999987665443
No 482
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=92.54 E-value=0.089 Score=52.40 Aligned_cols=34 Identities=18% Similarity=0.402 Sum_probs=31.4
Q ss_pred CeEEEECcchHHHHHHHHHHhc--CCCCeEEEEeCCHH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANK--KSQLKVYMLMRDPA 163 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~--G~~~~V~v~~r~~~ 163 (460)
|+|.|||+|..|.++|..|++. | .+|+++++.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G--~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPL--WAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTT--SEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCC--CCEEEEECCCC
Confidence 5899999999999999999999 8 99999998753
No 483
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=92.52 E-value=0.23 Score=46.04 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=36.1
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
.++++.|.|+ |.+|.++|..|++.| ++|++.+|+.+..+++.+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 45 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERG--HQVSMMGRRYQRLQQQEL 45 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 4567889995 789999999999999 999999999887766544
No 484
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.52 E-value=0.26 Score=48.45 Aligned_cols=94 Identities=14% Similarity=0.151 Sum_probs=58.5
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-----C
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-----G 199 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-----~ 199 (460)
...+|.|+|+ |.+|.+++..+...| .+|++.++++++.+.+++.|..... + +.. ..+..+.+. .
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~V~~~~~~~~~~~~~~~~g~~~~~--d--~~~----~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMG--YRVLGIDGGEGKEELFRSIGGEVFI--D--FTK----EKDIVGAVLKATDGG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSTTHHHHHHHTTCCEEE--E--TTT----CSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHHHcCCceEE--e--cCc----cHhHHHHHHHHhCCC
Confidence 3578999999 999999999999888 8999999998877766665432100 0 000 012222221 5
Q ss_pred CcEEEEccchhcHHHHHHHhhhcCCCCCeEEEe
Q 012596 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 200 aDiVilaVp~~~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
.|+||-++... ..++...+.++++..++.+
T Consensus 239 ~D~vi~~~g~~---~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 239 AHGVINVSVSE---AAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEEEECSSCH---HHHHHHTTSEEEEEEEEEC
T ss_pred CCEEEECCCcH---HHHHHHHHHHhcCCEEEEE
Confidence 78888887642 2233344445555555554
No 485
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=92.50 E-value=0.11 Score=54.49 Aligned_cols=35 Identities=17% Similarity=0.410 Sum_probs=31.6
Q ss_pred CCCeEEEECcchHHHHHHHHHHh---cCCCCeEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVAN---KKSQLKVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~---~G~~~~V~v~~r~~ 162 (460)
++.+|.|||+|..|.+.|..|++ .| .+|+++++..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G--~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQ--ANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSS--CEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCC--CEEEEECCCC
Confidence 45789999999999999999999 88 8999999853
No 486
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=92.50 E-value=0.25 Score=45.55 Aligned_cols=43 Identities=16% Similarity=0.185 Sum_probs=37.1
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012596 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (460)
Q Consensus 126 ~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~ 170 (460)
+.++|.|.|+ |.+|..++..|++.| ++|++++|+++..+.+.+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 49 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASG--AKVVAVTRTNSDLVSLAK 49 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 3578999996 899999999999999 999999999877666554
No 487
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=92.48 E-value=0.11 Score=49.03 Aligned_cols=34 Identities=15% Similarity=0.342 Sum_probs=30.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
+.+|.|||+|.-|...|..|++.| ++|+++++.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRAR--KNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 368999999999999999999999 8999999753
No 488
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=92.48 E-value=0.076 Score=53.76 Aligned_cols=37 Identities=19% Similarity=0.277 Sum_probs=33.0
Q ss_pred cCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012596 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (460)
Q Consensus 125 ~~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~ 163 (460)
|+..+|.|||+|..|...|..|++.| .+|+++++.+.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G--~~V~vlEk~~~ 38 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLG--KSVTVFDNGKK 38 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCC--CCEEEEeCCCC
Confidence 34468999999999999999999999 89999998764
No 489
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.48 E-value=0.13 Score=50.89 Aligned_cols=91 Identities=12% Similarity=0.080 Sum_probs=59.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEe-C-CHHhhc-CCCcE
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT-T-DAKTAL-LGADY 202 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~-~-~~~ea~-~~aDi 202 (460)
...+|.|+|+|.+|...+..+...| .+|++.++++++.+.+++.|.... +... . +..+.+ ..+|+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~lGa~~v----------~~~~~~~~~~~~~~~~~D~ 246 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMKMGADHY----------IATLEEGDWGEKYFDTFDL 246 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHHHTCSEE----------EEGGGTSCHHHHSCSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHcCCCEE----------EcCcCchHHHHHhhcCCCE
Confidence 3578999999999999888888788 789999998888877777664210 0000 1 222223 46899
Q ss_pred EEEccch---hcHHHHHHHhhhcCCCCCeEEEe
Q 012596 203 CLHAMPV---QFSSSFLEGISDYVDPGLPFISL 232 (460)
Q Consensus 203 VilaVp~---~~~~~vl~~i~~~l~~~~iIV~~ 232 (460)
||-++.. ..+.. ..+.++++..++.+
T Consensus 247 vid~~g~~~~~~~~~----~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 247 IVVCASSLTDIDFNI----MPKAMKVGGRIVSI 275 (360)
T ss_dssp EEECCSCSTTCCTTT----GGGGEEEEEEEEEC
T ss_pred EEECCCCCcHHHHHH----HHHHhcCCCEEEEe
Confidence 9999876 23332 33444455555544
No 490
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=92.48 E-value=0.17 Score=52.55 Aligned_cols=66 Identities=17% Similarity=0.178 Sum_probs=46.9
Q ss_pred CCCeEEEECcchHHHH-HHHHHHhcCCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEE
Q 012596 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~-~A~~La~~G~~~~V~v~~r~~~-~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (460)
+.+||.|||.|..|.+ +|..|.+.| ++|+++|.... ..+.+.+.|.... .-.+.+ .+.++|+|
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~~G--~~V~~~D~~~~~~~~~l~~~gi~~~------------~g~~~~-~~~~a~~v 82 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLANEG--YQISGSDLAPNPVTQQLMNLGATIY------------FNHRPE-NVRDASVV 82 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHTT--CEEEEECSSCCHHHHHHHHTTCEEE------------SSCCGG-GGTTCSEE
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHhCC--CeEEEECCCCCHHHHHHHHCCCEEE------------CCCCHH-HcCCCCEE
Confidence 4578999999999997 999999999 99999997643 3455655553211 001232 35678998
Q ss_pred EEc
Q 012596 204 LHA 206 (460)
Q Consensus 204 ila 206 (460)
|+.
T Consensus 83 v~s 85 (491)
T 2f00_A 83 VVS 85 (491)
T ss_dssp EEC
T ss_pred EEC
Confidence 885
No 491
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.47 E-value=0.51 Score=46.94 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=59.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~-~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (460)
..+|.|+|+|.+|...+..+...| . .|++.++++++.+.+++.|...... ... ...+..+.+ ..+
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi~----~~~---~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAG--ASRIIGIDIDSKKYETAKKFGVNEFVN----PKD---HDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHT--CSCEEEECSCTTHHHHHHTTTCCEEEC----GGG---CSSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHcCCcEEEc----ccc---CchhHHHHHHHhcCCCC
Confidence 578999999999998888887778 6 7999999998888777766421100 000 001222221 258
Q ss_pred cEEEEccchhcHHHHHHHhhhcCCCC-CeEEEe
Q 012596 201 DYCLHAMPVQFSSSFLEGISDYVDPG-LPFISL 232 (460)
Q Consensus 201 DiVilaVp~~~~~~vl~~i~~~l~~~-~iIV~~ 232 (460)
|+||-++..... ++.....++++ ..++.+
T Consensus 265 D~vid~~g~~~~---~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 265 DYSFECIGNVSV---MRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SEEEECSCCHHH---HHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCHHH---HHHHHHHhhccCCEEEEE
Confidence 999999886322 23333445553 555554
No 492
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=92.47 E-value=0.1 Score=52.47 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=30.9
Q ss_pred CCeEEEECcchHHHHHHHHHHh---cCCCCeEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVAN---KKSQLKVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~---~G~~~~V~v~~r~~ 162 (460)
|++|.|||+|..|...|..|++ .| ++|+++++++
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g--~~V~vie~~~ 37 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSK--ADVKVINKSR 37 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGG--SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCC--CeEEEEeCCC
Confidence 4689999999999999999999 77 8999999876
No 493
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=92.46 E-value=0.09 Score=53.58 Aligned_cols=36 Identities=22% Similarity=0.403 Sum_probs=31.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~~ 163 (460)
...+|.|||+|..|...|..|++.| .+|+++++.+.
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G--~~V~llEk~~~ 61 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRG--RRVLVIDHARA 61 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCCC
Confidence 3468999999999999999999999 89999998865
No 494
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=92.46 E-value=0.1 Score=53.34 Aligned_cols=34 Identities=35% Similarity=0.483 Sum_probs=31.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCH
Q 012596 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDP 162 (460)
Q Consensus 127 ~~kI~IIGaG~mG~~~A~~La~~G~~~--~V~v~~r~~ 162 (460)
+++|+|||+|..|.+.|..|+++| + +|+++.++.
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G--~~~~V~vlEa~~ 37 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAP--CPPKVVLVESSE 37 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSS--SCCEEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHhCC--CCCcEEEEeCCC
Confidence 479999999999999999999999 8 999998754
No 495
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.44 E-value=0.12 Score=52.82 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=31.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~--~V~v~~r~~ 162 (460)
..++|+|||+|..|.+.|..|++.| . +|+++++..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G--~~~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEK--AFDQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT--CCSEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--CCCCeEEEecCC
Confidence 3579999999999999999999999 7 999999874
No 496
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=92.44 E-value=0.28 Score=47.67 Aligned_cols=73 Identities=16% Similarity=0.216 Sum_probs=56.4
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCcEEE
Q 012596 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (460)
Q Consensus 126 ~~~kI~IIG-aG~mG~~~A~~La~~G~~~~V~v~~r~~~~~~~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (460)
..+++.||| ...+|.++|..|.+.+ ..|+++.... .++.+..+.||+||
T Consensus 178 ~Gk~vvViGRS~iVGkPla~LL~~~~--ATVTi~Hs~T----------------------------~dl~~~~~~ADIvV 227 (303)
T 4b4u_A 178 AGKHAVVVGRSAILGKPMAMMLLQAN--ATVTICHSRT----------------------------QNLPELVKQADIIV 227 (303)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SSHHHHHHTCSEEE
T ss_pred CCCEEEEEeccccccchHHHHHHhcC--CEEEEecCCC----------------------------CCHHHHhhcCCeEE
Confidence 468999999 5567999999999988 8999875432 26777788999999
Q ss_pred EccchhcHHHHHHHhhhcCCCCCeEEEec
Q 012596 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (460)
Q Consensus 205 laVp~~~~~~vl~~i~~~l~~~~iIV~~~ 233 (460)
.++..... + -.+++++|+++|++.
T Consensus 228 ~A~G~p~~---i--~~d~vk~GavVIDVG 251 (303)
T 4b4u_A 228 GAVGKAEL---I--QKDWIKQGAVVVDAG 251 (303)
T ss_dssp ECSCSTTC---B--CGGGSCTTCEEEECC
T ss_pred eccCCCCc---c--ccccccCCCEEEEec
Confidence 99874432 0 135688999999973
No 497
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.38 E-value=0.08 Score=51.02 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=31.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 126 ~~~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
++++|.|||+|.-|...|..|++.| ++|+++++.+
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAE--IKPILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCCEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEecCC
Confidence 3579999999999999999999999 8999999843
No 498
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=92.37 E-value=1.1 Score=44.99 Aligned_cols=123 Identities=18% Similarity=0.216 Sum_probs=62.6
Q ss_pred ccCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEE--EeCCHHHHHHHHhh-cCCCccCCCC--------CCC-CceEE-
Q 012596 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYM--LMRDPAVCQSINEK-HCNCRYFPEQ--------KLP-ENVIA- 189 (460)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~~A~~La~~G~~~~V~v--~~r~~~~~~~l~~~-g~~~~~~~~~--------~l~-~~i~a- 189 (460)
|+.|+||+|+|+ |.||+.....+.++...++|+. .+++.+.+.+..++ +.......+. .++ ....+
T Consensus 1 m~~m~rI~ILGsTGSIG~~~l~vi~~~p~~~~v~al~ag~ni~~l~~~~~~f~~~~v~v~d~~~~~~l~~~l~~~~~~v~ 80 (388)
T 1r0k_A 1 MSQPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAA 80 (388)
T ss_dssp -CCCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEE
T ss_pred CCCceEEEEECCCeEeHHHHHHHHHhCcCcEEEEEEEcCCCHHHHHHHHHHcCCcEEEEcChHHHHHHHHHhccCCcEEE
Confidence 334578999999 9999999999988641245553 46676655444332 2210000000 000 00111
Q ss_pred --eCCHHhhcC-CCcEEEEccch-hcHHHHHHHhhhcCCCCCeEEEeccCCccchhhhHHHHHHH
Q 012596 190 --TTDAKTALL-GADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (460)
Q Consensus 190 --~~~~~ea~~-~aDiVilaVp~-~~~~~vl~~i~~~l~~~~iIV~~~~Gi~~~~~~~l~e~l~~ 250 (460)
.+++.+++. ++|+|+.+++. ..+...+..| +.|+.|+...|......+..+.+..++
T Consensus 81 ~g~~~~~el~~~~iDvVV~ai~G~aGl~ptlaAi----~aGK~VvlANKE~lv~~G~~l~~~A~~ 141 (388)
T 1r0k_A 81 AGADALVEAAMMGADWTMAAIIGCAGLKATLAAI----RKGKTVALANKESLVSAGGLMIDAVRE 141 (388)
T ss_dssp ESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHH----HTTSEEEECCSHHHHTTHHHHHHHHHH
T ss_pred eCccHHHHHHcCCCCEEEEeCCCHHHHHHHHHHH----HCCCEEEEeCcHHHHhhHHHHHHHHHH
Confidence 122223332 27999999864 3344443333 346777766554333223334444443
No 499
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=92.36 E-value=0.52 Score=46.51 Aligned_cols=101 Identities=18% Similarity=0.169 Sum_probs=58.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHhh----cCCCc--cCCCCCC---CCceEEe--CCHH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEK----HCNCR--YFPEQKL---PENVIAT--TDAK 194 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r--~~~~~~~l~~~----g~~~~--~~~~~~l---~~~i~a~--~~~~ 194 (460)
+||||+|+|++|..+.+.|.++. .+|..++- +.+....+-+. |.-.. ...+..+ ...+.+. .+++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~--~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 78 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRG--VEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK 78 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChh
Confidence 48999999999999999998775 78876553 44444444332 21000 0001111 1234443 2555
Q ss_pred hhc-C--CCcEEEEccchhcHHHHHHHhhhcCCCCC--eEEEec
Q 012596 195 TAL-L--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (460)
Q Consensus 195 ea~-~--~aDiVilaVp~~~~~~vl~~i~~~l~~~~--iIV~~~ 233 (460)
+.- . ++|+||.|++.....+...... +.|. +||+..
T Consensus 79 ~l~w~~~gvDiV~estG~~~s~e~a~~~l---~aGakkvVIsap 119 (331)
T 2g82_O 79 EIPWAEAGVGVVIESTGVFTDADKAKAHL---EGGAKKVIITAP 119 (331)
T ss_dssp GSCTTTTTEEEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred hCcccccCCCEEEECCCchhhHHHHHHHH---HCCCCEEEECCC
Confidence 431 2 6899999999776555443332 2344 666654
No 500
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.35 E-value=0.08 Score=52.07 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=30.6
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012596 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (460)
Q Consensus 128 ~kI~IIGaG~mG~~~A~~La~~G~~~~V~v~~r~~ 162 (460)
.+|.|||+|..|.+.|..|+++| .+|+++++..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G--~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAG--LNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTT--CCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--CeEEEEecCC
Confidence 58999999999999999999999 8999999864
Done!