BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012602
(460 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYB5|AMSH1_ARATH AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana GN=AMSH1
PE=2 SV=1
Length = 507
Score = 544 bits (1401), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/442 (62%), Positives = 336/442 (76%), Gaps = 5/442 (1%)
Query: 1 MRSSSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSS 60
M SS E I+IA SA+R+ VDNRI+L++Y+RIADNILKQA+IFR EKN+IDLYVMLLRFSS
Sbjct: 1 MGSSFETIDIATSARRIGVDNRISLKFYFRIADNILKQANIFRAEKNVIDLYVMLLRFSS 60
Query: 61 LVTETIPCHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWS 120
L ETIP HRDY S KS K YL+ +LL+ L+ELE+L+P VQQ+I+EL K + +
Sbjct: 61 LALETIPSHRDYRTSLKSNKEYLRMRLLDVLTELEKLKPVVQQRIDELYPKLKPRYNVQA 120
Query: 121 HASQNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLN 180
H + N +L W S K + +YD K P Y GS QQ P++E+FR+MS+N
Sbjct: 121 HPA-NGSLGWSSAVKPSFNSYDHAKVRNPPGHNSGYMGSRGQQFLNAAPLEERFRKMSVN 179
Query: 181 FPRPNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIK 240
F RPN ETLS+HS+LGP GL WQPPK D V+YP+NID +P+ IPS +Q +S I
Sbjct: 180 F-RPNEETLSKHSILGPGGLSAQWQPPKYDTKVQYPSNIDFSPVVIPSFQQLVDSKPMI- 237
Query: 241 TDSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTE 300
T+ SN EPEK V+ N++I+ + TEE SMISFE E+ N ++IRQPSPPPVL E
Sbjct: 238 TNGSNDEPEKPIVEPSVASNEKIQKNYTEELSSMISFEEPESVNENNLIRQPSPPPVLAE 297
Query: 301 VQDLIAAMSPQVTETECQVGNSLSDAFDRSE-PLQLHISTTMMDNFMKLAKSNTDKNLET 359
VQDL+ A+ P+V E EC + NSL D RSE PL+LHI+T+MMD FM+LAKSNT KNLET
Sbjct: 298 VQDLVPALCPEVREPECMIENSLPDESLRSESPLELHIATSMMDTFMRLAKSNTKKNLET 357
Query: 360 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQS 419
CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDK+SLFPLGWIHTHPTQS
Sbjct: 358 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQS 417
Query: 420 CFMSSIDVHTHYSYQVNVVPDA 441
CFMSSIDVHTHYSYQ+ ++P+A
Sbjct: 418 CFMSSIDVHTHYSYQI-MLPEA 438
>sp|Q5PNU3|AMSH3_ARATH AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana GN=AMSH3
PE=1 SV=2
Length = 507
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/442 (45%), Positives = 284/442 (64%), Gaps = 14/442 (3%)
Query: 8 INIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIP 67
I++ A+ ++VDNRI LR YYRIADN+L+QA I+REEKN++DLY+MLLR+SSL++ETIP
Sbjct: 3 IDLNKVAREIEVDNRIPLRNYYRIADNLLRQASIYREEKNVVDLYIMLLRYSSLISETIP 62
Query: 68 CHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSH----AS 123
HRDY AS ++L +K+L ++ELE L+P Q +++LNR + S +
Sbjct: 63 FHRDYQASLPQERLGSRKRLRAVINELESLKPEFNQLVDKLNRVEDESRQDGSDLPVVSY 122
Query: 124 QNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPR 183
+ +EWP K + + D+ K L Y ++ T+ +D+QF+++S +F
Sbjct: 123 SSDAVEWPPAHKASYSRPDINKPLPTSQPSWTYNNNLTSSSNRTQ-IDQQFQKLSFDFLP 181
Query: 184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQ--PSESSIKIKT 241
PN TLSRHS LGPNGL PKS+ V+YP+N D + L + PS SS +
Sbjct: 182 PNQATLSRHSFLGPNGLKRQMVAPKSEIKVQYPSNTDWGSADNSGLIEAGPSSSSASLNG 241
Query: 242 DSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEV 301
DS V S++ S+ + +D +E S + +E P ++QPSPPPVL +V
Sbjct: 242 DSQEV----STLNSVLSLDDGRWQRHSEAVNSQFISDATEDPFQFVGMKQPSPPPVLAQV 297
Query: 302 QDLIAAMSP-QVTETECQVGNSLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLET 359
+A + P +V + + + S Q LH+ +MD+F++LA+SNT++NLET
Sbjct: 298 HQELAQICPSKVADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLET 357
Query: 360 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQS 419
CG+LAGSLKNR F+IT LIIPKQESTSDSCQ NEEEIFEVQD+ SLFPLGWIHTHPTQ+
Sbjct: 358 CGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPTQT 417
Query: 420 CFMSSIDVHTHYSYQVNVVPDA 441
CFMSS+D+HTHYSYQ+ ++P+A
Sbjct: 418 CFMSSVDLHTHYSYQI-MLPEA 438
>sp|Q6NKP9|AMSH2_ARATH AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana GN=AMSH2
PE=2 SV=1
Length = 223
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 90/107 (84%), Gaps = 1/107 (0%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNE 394
+HIS ++++F +LA+ NT+K+LETCG LA L+ FY+T LIIPKQESTS+SCQA NE
Sbjct: 49 VHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNE 108
Query: 395 EEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQVNVVPDA 441
E+F +Q++R L+P+GWIHTHP+Q CFMSS+D+HTHYSYQV +VP+A
Sbjct: 109 VEVFSIQNERELYPVGWIHTHPSQGCFMSSVDLHTHYSYQV-MVPEA 154
>sp|Q9P371|SST2_SCHPO AMSH-like protease sst2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sst2 PE=1 SV=1
Length = 435
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 204/440 (46%), Gaps = 95/440 (21%)
Query: 10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPC- 68
IA+ A D + I L+ + R + I KQA ++ E + + +L R+ L + C
Sbjct: 16 IASRAGAFDFNKNIPLKNWLRTSTTISKQAHVYVSEHDYSNGVFLLFRYCELFMK---CQ 72
Query: 69 -HRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHASQNST 127
H D A++K + + + NAL E+E ++P V+++ + + Q +
Sbjct: 73 KHPD-AAAYKKELFDYYQGVRNALEEIELIKPIVKEQYEQ-------------YQCQKND 118
Query: 128 LEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYT-RPVDEQFRRMSLNFPRPNA 186
L+ LKK ++ + Q S+ + ++Y P+ EQ+ L P
Sbjct: 119 LD--DLKKLSMKDS---------------QPSLEKPVSYVDEPILEQWALSDLQILPP-- 159
Query: 187 ETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDSSNV 246
S LL P+ S KL K ++ DL + PSL + + SS
Sbjct: 160 ---SSTDLLSPD----------SQKLSK--SSSDLPQFDYPSLNSSPTFNSNLPISSSRF 204
Query: 247 EPEKSSVQSISTP---NDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQD 303
E S + +P +D +I ++P I TSE P P P
Sbjct: 205 EKTSLSDSKLVSPEPLDDNKDIQFIKKP---IYTRTSE----------PRPKPA------ 245
Query: 304 LIAAMSPQVTETECQVGNSLSDAF-DRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLETCG 361
G A+ + +PL+ +++ + F+ + K NT KNLETCG
Sbjct: 246 ----------------GTFKIHAYTEGGKPLRTIYLPKLLKKVFLDVVKPNTKKNLETCG 289
Query: 362 ILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCF 421
IL G L+ F+IT L+IP QE+TSD+C T+E +FE QDK +L LGWIHTHPTQ+CF
Sbjct: 290 ILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFEFQDKHNLLTLGWIHTHPTQTCF 349
Query: 422 MSSIDVHTHYSYQVNVVPDA 441
MSS+D+HTH SYQ+ ++P+A
Sbjct: 350 MSSVDLHTHCSYQL-MLPEA 368
>sp|Q96FJ0|STALP_HUMAN AMSH-like protease OS=Homo sapiens GN=STAMBPL1 PE=1 SV=2
Length = 436
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 199/451 (44%), Gaps = 99/451 (21%)
Query: 4 SSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVT 63
S G NI S I R Y+R + + A ++ EE N+ + +V+ +F +L
Sbjct: 34 SKLGCNITISED-------ITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFV 86
Query: 64 ETIPCHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHAS 123
E +P HRDY A+ E ++ + +K+ E+ +T++
Sbjct: 87 EKLPNHRDYQQC--------------AVPEKQD----IMKKLKEIAFPRTDE-------- 120
Query: 124 QNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPR 183
LK L Y+V L S+ Y+ I ++L + R ++ + +R++
Sbjct: 121 ---------LKNDLLKKYNVEYQEYLQSKN-KYKAEILKKLEHQRLIEAERKRIA----- 165
Query: 184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDS 243
Q +S++ + + + + + +R S + + D
Sbjct: 166 -----------------QMRQQQLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDG 208
Query: 244 SNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQD 303
S + S S N + + ++P S T+ A +S V R +P L+ VQ+
Sbjct: 209 SAL-----SCFSTHQNNSLLNVF-ADQPNK--SDATNYASHSPPVNRALTPAATLSAVQN 260
Query: 304 LIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGIL 363
L+ V C V + + F++LA+SNT + +ETCGIL
Sbjct: 261 LV------VEGLRCVV-----------------LPEDLCHKFLQLAESNTVRGIETCGIL 297
Query: 364 AGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMS 423
G L + +F IT +I+PKQ + D C N EE+F VQD+ L LGWIHTHPTQ+ F+S
Sbjct: 298 CGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLS 357
Query: 424 SIDVHTHYSYQVNVVPDARS--CWKKRGEIG 452
S+D+HTH SYQ+ ++P+A + C K + G
Sbjct: 358 SVDLHTHCSYQL-MLPEAIAIVCSPKHKDTG 387
>sp|Q5R558|STALP_PONAB AMSH-like protease OS=Pongo abelii GN=STAMBPL1 PE=2 SV=1
Length = 436
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 184/413 (44%), Gaps = 89/413 (21%)
Query: 23 IALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASFKSQKLY 82
I R Y+R + + A ++ EE N+ + +V+ +F +L E +P HRDY
Sbjct: 46 ITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQC------- 98
Query: 83 LKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHASQNSTLEWPSLKKQTLTNYD 142
A+ E ++ + +K+ E+ +T++ LK L Y+
Sbjct: 99 -------AVPEKQD----IMKKLKEIAFPRTDE-----------------LKNDLLKKYN 130
Query: 143 VTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPRPNAETLSRHSLLGPNGLYG 202
V L S+ Y+ I ++L + R ++ + +R++
Sbjct: 131 VEYQEYLQSKN-QYKAEILKKLEHQRLIEAERKRIA----------------------QM 167
Query: 203 HWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDSSNVEPEKSSVQSISTPNDE 262
Q +S++ + + + + + +R S + + D S + S S N
Sbjct: 168 RQQQLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDGSAL-----SCFSTHQNNSL 222
Query: 263 IEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGNS 322
+ + ++P S T+ A +S V R +P L+ VQ+L+ V C V
Sbjct: 223 LNVF-ADQPNK--SDATNYASHSPPVNRALTPAATLSAVQNLV------VEGLRCVV--- 270
Query: 323 LSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQ 382
+ + F++LA+SNT + +ETCGIL G L + +F IT +I+PKQ
Sbjct: 271 --------------LPKDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQ 316
Query: 383 ESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQV 435
+ D C N EE+F VQD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+
Sbjct: 317 SAGPDYCDVENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQL 369
>sp|Q54Q40|D1039_DICDI Probable ubiquitin thioesterase DG1039 OS=Dictyostelium discoideum
GN=DG1039 PE=3 SV=1
Length = 715
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 306 AAMSPQVTETECQVGNSLSDAFDRSEPL-QLHISTTMMDNFMKLAKSNTDKNLETCGILA 364
A +P +T T + S+A + L ++ + + FM+LA++NT +++ETCGIL+
Sbjct: 507 AVNTPSITPTTNKPNIDSSEASKKYSKLRKIIVHGEVFQEFMRLAENNTKRSIETCGILS 566
Query: 365 GSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSS 424
G+L N F IT +IIPKQE T+D+C E EIFE Q + L LGWIHTHPTQ CF+S+
Sbjct: 567 GTLSNDVFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDLLTLGWIHTHPTQDCFLSA 626
Query: 425 IDVHTHYSYQ 434
+DVHTH SYQ
Sbjct: 627 VDVHTHCSYQ 636
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCH 69
+ + ++VD ++ +Y +N++KQADI++ E +I Y+ LRF L+ E + H
Sbjct: 17 VKKHVEGVEVDKNYSIFHYLSTCNNLVKQADIYKSEGDIERTYIYSLRFCILIFEKLQKH 76
Query: 70 RDY-LASFKSQKLYLKKKLLNALSELEELQPAVQQ 103
D+ SF + +K+K L ELE L+ +++
Sbjct: 77 PDFNKESFTKSRNEIKRKAELKLKELEGLKETLKK 111
>sp|Q6TH47|STBPA_DANRE STAM-binding protein-like A OS=Danio rerio GN=stambpa PE=2 SV=3
Length = 418
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 3/124 (2%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATN 393
QL + + F+KLA++NT + +ETCGIL G L F +T +I+PKQ D C N
Sbjct: 250 QLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTEN 309
Query: 394 EEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQVNVVPD--ARSCWKKRGEI 451
EEE+F +QD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+ ++P+ A C K E
Sbjct: 310 EEELFLIQDQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQM-MLPESIAIVCSPKFNET 368
Query: 452 GRKR 455
G R
Sbjct: 369 GYFR 372
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY-LAS 75
+DV + R Y+R I++ A+I+ +E N+ +++ ++ +L E +P HR+Y A+
Sbjct: 25 VDVSEDVPPRRYFRSGMEIIRMANIYADEGNVEHAFILYNKYITLFIEKLPKHREYKTAN 84
Query: 76 FKSQKLYLKKKLLNALSELEELQ 98
+K ++K A + EEL+
Sbjct: 85 IPEKKETMRKLKEIAFPKAEELK 107
>sp|O95630|STABP_HUMAN STAM-binding protein OS=Homo sapiens GN=STAMBP PE=1 SV=1
Length = 424
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 345 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
F++LA +NT + +ETCGIL G L +F IT ++IPKQ + SD C NEEE+F +QD++
Sbjct: 267 FLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQ 326
Query: 405 SLFPLGWIHTHPTQSCFMSSIDVHTHYSYQVNVVPD--ARSCWKKRGEIG 452
L LGWIHTHPTQ+ F+SS+D+HTH SYQ+ ++P+ A C K E G
Sbjct: 327 GLITLGWIHTHPTQTAFLSSVDLHTHCSYQM-MLPESVAIVCSPKFQETG 375
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
++V+ I R Y+R I++ A I+ EE NI +++ ++ +L E +P HRDY ++
Sbjct: 25 VEVNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAV 84
Query: 77 KSQKLYLKKKLLN-ALSELEELQPAVQQKINELNRKKTNQVTGWS 120
+K KKL A + EEL+ EL ++ T + T ++
Sbjct: 85 IPEKKDTVKKLKEIAFPKAEELK-------AELLKRYTKEYTEYN 122
>sp|Q76N33|STALP_MOUSE AMSH-like protease OS=Mus musculus GN=Stambpl1 PE=2 SV=1
Length = 436
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Query: 337 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 396
+S + F+ LA SNT + +ETCGIL G L + +F IT +++PKQ + D C N EE
Sbjct: 271 LSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEE 330
Query: 397 IFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQVNVVPDARS--CWKKRGEIG 452
+F VQD+ L LGWIHTHPTQ+ F+SS+D+HTH SYQ+ ++P+A + C K + G
Sbjct: 331 LFNVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQL-MLPEAIAIVCSPKHKDTG 387
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
+ ++ I R Y+R + + A ++ EE N+ + +V+ +F +L E +P HRDY
Sbjct: 40 ISINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCA 99
Query: 77 KSQKLYLKKKLLN-ALSELEELQPAVQQKIN 106
+K + KKL A +EL+ + +K N
Sbjct: 100 VPEKQDIMKKLKEIAFPRTDELKTDLLRKYN 130
>sp|Q9CQ26|STABP_MOUSE STAM-binding protein OS=Mus musculus GN=Stambp PE=2 SV=1
Length = 424
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 337 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 396
+ + F++LA +NT K +ETCG+L G L +F IT ++IP+Q D C NEEE
Sbjct: 259 VPRNLCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEE 318
Query: 397 IFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQVNVVPD--ARSCWKKRGEIG 452
IF +QD L LGWIHTHPTQ+ F+SS+D+HTH SYQ+ ++P+ A C K E G
Sbjct: 319 IFFMQDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQM-MLPESIAIVCSPKFQETG 375
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 12 ASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRD 71
SA L+ D I R YYR I++ A ++ EE NI +++ ++ +L E +P HRD
Sbjct: 22 GSAVELNED--IPPRRYYRSGVEIIRMASVYSEEGNIEHAFILYNKYITLFIEKLPKHRD 79
Query: 72 YLASFKSQKLYLKKKLLN-ALSELEELQPAVQQKINELNRKKTNQ 115
Y ++ +K KKL + A + EEL+ EL R+ T +
Sbjct: 80 YKSAIIPEKKDAVKKLKSVAFPKAEELK-------TELLRRYTKE 117
>sp|Q8R424|STABP_RAT STAM-binding protein OS=Rattus norvegicus GN=Stambp PE=2 SV=1
Length = 424
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 341 MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEV 400
+ F++LA +NT K +ETCG+L G L +F IT ++IP+Q D C NEEEIF +
Sbjct: 263 LCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFM 322
Query: 401 QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQVNVVPD--ARSCWKKRGEIG 452
QD L LGWIHTHPTQ+ F+SS+D+HTH SYQ+ ++P+ A C K E G
Sbjct: 323 QDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQM-MLPESIAIVCSPKFQETG 375
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 12 ASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRD 71
SA L+ D I R Y+R I++ A I+ EE NI +++ ++ +L E +P HRD
Sbjct: 22 GSAVELNED--IPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRD 79
Query: 72 YLASFKSQKLYLKKKLLN-ALSELEELQ 98
Y ++ +K KKL N A + EEL+
Sbjct: 80 YKSAIIPEKKDAVKKLKNVAFPKAEELK 107
>sp|Q63ZM7|STABP_XENLA STAM-binding protein-like OS=Xenopus laevis GN=stambp PE=2 SV=1
Length = 416
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 77/110 (70%), Gaps = 3/110 (2%)
Query: 345 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
F++L+++NT + +ETCGIL G L +F +T +I+PKQ D C +EEE+F +QD++
Sbjct: 259 FLQLSENNTQRGVETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELFLIQDQQ 318
Query: 405 SLFPLGWIHTHPTQSCFMSSIDVHTHYSYQVNVVPD--ARSCWKKRGEIG 452
L LGWIHTHPTQ+ F+SS+D+HTH SYQ+ ++P+ A C K E G
Sbjct: 319 GLITLGWIHTHPTQTAFLSSVDLHTHCSYQM-MLPESIAIVCSPKFQETG 367
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY 72
++V++ I + YYR +++ A+++ E +I + +++ ++ +L E +P HRDY
Sbjct: 25 VEVNDDIPPKRYYRSGVELIRMANVYSGEGSIENAFILYNKYITLFIEKLPKHRDY 80
>sp|Q86IJ1|PSDE_DICDI 26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium
discoideum GN=psmD14 PE=3 SV=1
Length = 306
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 319 VGNSLSDAF---DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKF--Y 373
+G ++DA D +E + HIS+ + ++ A++ LE G++ G L +
Sbjct: 14 LGEKITDATPLPDTAETI--HISSLALLKMLQHARAGVP--LEVMGLMLGELIDEYTIRV 69
Query: 374 ITALIIPKQESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVH 428
I +P Q TS S +A + + ++ ++ Q R +GW H+HP C++SS+DV+
Sbjct: 70 IDVFAMP-QSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGWYHSHPGFGCWLSSVDVN 128
Query: 429 THYSYQ 434
T S++
Sbjct: 129 TQQSFE 134
>sp|Q7RXX8|CSN5_NEUCR COP9 signalosome complex subunit 5 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=rri-1 PE=1 SV=1
Length = 336
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 294 PPPVLTEVQ-DLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSN 352
P P L +VQ D + A +E V NS D + IS+ M + A+S
Sbjct: 5 PNPGLVDVQRDALYAYD---SEAHKAVVNSRPWTNDHKYFKTVRISSVAMIKMVMHARSG 61
Query: 353 TDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQ-------DKRS 405
NLE G++ G ++ IT E T A +E + V+ + R
Sbjct: 62 --GNLEVMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRL 119
Query: 406 LFPLGWIHTHPTQSCFMSSIDVHTHYSYQ------VNVVPDA-RSCWKKRGEIGRKR 455
+GW H+HP C++S IDV T Q V VV D R+ + + EIG R
Sbjct: 120 ENVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFR 176
>sp|Q4IJM4|CSN5_GIBZE COP9 signalosome complex subunit 5 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRI1 PE=3
SV=1
Length = 340
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 328 DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSD 387
D S + IS T + A+S NLE G++ G + F +T E T
Sbjct: 45 DPSHFKHVRISATALIKMTMHARSGG--NLEVMGLMQGYTQGDTFIVTDAFRLPVEGTET 102
Query: 388 SCQATNE--EEIFEVQD-----KRSLFPLGWIHTHPTQSCFMSSIDVHT 429
A +E E I E D R +GW H+HP C++S IDV T
Sbjct: 103 RVNAQDEANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDT 151
>sp|P0CQ24|CSN5_CRYNJ COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=RRI1 PE=3 SV=1
Length = 371
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 329 RSEPLQLH---ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEST 385
R++P H IS + + A+S E GI+ G +++ F+I + + T
Sbjct: 42 RTDPHYFHTVKISAVALIKMVTHARSGGI--YEIMGIMYGKVRDGTFWIMDVAALPVQGT 99
Query: 386 SDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYS------ 432
A NE + V + + GW H+HP C++S IDV+T +
Sbjct: 100 ETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFND 159
Query: 433 -YQVNVVPDARSCWKKRGEIGRKR 455
Y V+ R+ + EIG R
Sbjct: 160 PYLAVVIDPNRTVSAGKVEIGAFR 183
>sp|P0CQ25|CSN5_CRYNB COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=RRI1 PE=3 SV=1
Length = 371
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 19/144 (13%)
Query: 329 RSEPLQLH---ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEST 385
R++P H IS + + A+S E GI+ G +++ F+I + + T
Sbjct: 42 RTDPHYFHTVKISAVALIKMVTHARSGGI--YEIMGIMYGKVRDGTFWIMDVAALPVQGT 99
Query: 386 SDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYS------ 432
A NE + V + + GW H+HP C++S IDV+T +
Sbjct: 100 ETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFND 159
Query: 433 -YQVNVVPDARSCWKKRGEIGRKR 455
Y V+ R+ + EIG R
Sbjct: 160 PYLAVVIDPNRTVSAGKVEIGAFR 183
>sp|Q6FKS1|RPN11_CANGA 26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RPN11 PE=3 SV=1
Length = 306
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 317 CQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYIT 375
+VG + ++ D E + +IS+ + +K ++ +E G++ G + +
Sbjct: 11 TKVGAADANKDDTKETV--YISSIALLKMLKHGRAGVP--MEVMGLMLGEFVDEYTVNVV 66
Query: 376 ALIIPKQESTSDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVH 428
+ Q T S +A +++F+ Q R +GW H+HP C++SS+DV+
Sbjct: 67 DVFAMPQSGTGVSVEAV--DDVFQARMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVN 124
Query: 429 THYSYQ 434
T S++
Sbjct: 125 TQKSFE 130
>sp|Q54PF3|CSN5_DICDI COP9 signalosome complex subunit 5 OS=Dictyostelium discoideum
GN=csn5 PE=1 SV=1
Length = 332
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 336 HISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEE 395
H+ + + + + + LE G+L G ++N I E T A E
Sbjct: 53 HVKISAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEA 112
Query: 396 EIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHT 429
+ V Q R LGW H+HP C++S IDV T
Sbjct: 113 YEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGT 153
>sp|P43588|RPN11_YEAST 26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN11 PE=1 SV=1
Length = 306
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 357 LETCGILAGS-LKNRKFYITALIIPKQESTSDSCQATNEEEIFEV-------QDKRSLFP 408
+E G++ G + + + + Q T S +A +++F+ Q R
Sbjct: 47 MEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAV--DDVFQAKMMDMLKQTGRDQMV 104
Query: 409 LGWIHTHPTQSCFMSSIDVHTHYSYQ 434
+GW H+HP C++SS+DV+T S++
Sbjct: 105 VGWYHSHPGFGCWLSSVDVNTQKSFE 130
>sp|Q9LT08|PSDE_ARATH 26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis
thaliana GN=RPN11 PE=2 SV=1
Length = 308
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 324 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNR-KFYITALIIPKQ 382
S D SE Q++IS+ + +K ++ +E G++ G + + + Q
Sbjct: 21 SPTLDTSE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDEYTVRVVDVFAMPQ 76
Query: 383 ESTSDSCQATNEEEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQ 434
T S +A + +F+ Q R +GW H+HP C++S +D++T S++
Sbjct: 77 SGTGVSVEAV--DHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE 133
>sp|Q3TV65|MPND_MOUSE MPN domain-containing protein OS=Mus musculus GN=Mpnd PE=2 SV=2
Length = 487
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Query: 326 AFDRSEPLQLHISTT---MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITAL-IIPK 381
A ++ +P + +S+ ++D L +S E G L G +T L P
Sbjct: 249 AINKFQPFNVAVSSNVLFLLDFHCHLTRS------EVVGYLGGRWDINNQMLTVLRAFPC 302
Query: 382 QESTSDS-CQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQVNV 437
+ D+ AT EEEI++V R L +GW H+HP S D+ YQ+ +
Sbjct: 303 RSRLGDTDTAATVEEEIYQVLFLRGLSLVGWYHSHPHSPAVPSLQDIDAQMEYQLRL 359
>sp|Q750E9|RPN11_ASHGO 26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=RPN11 PE=3 SV=1
Length = 311
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 357 LETCGILAGSLKNR-KFYITALIIPKQESTSDSCQATNEEEIFEV-------QDKRSLFP 408
+E G++ G + + + Q T S +A +++F+ Q R
Sbjct: 52 MEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAV--DDVFQAKMMDMLKQTGRDQMV 109
Query: 409 LGWIHTHPTQSCFMSSIDVHTHYSYQ 434
+GW H+HP C++SS+DV T S++
Sbjct: 110 VGWYHSHPGFGCWLSSVDVDTQRSFE 135
>sp|Q4P804|CSN5_USTMA COP9 signalosome complex subunit 5 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=RRI1 PE=3 SV=1
Length = 406
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 358 ETCGILAGSL--KNRKFYITALIIPKQESTSDSCQATNEEEIFEVQD-------KRSLFP 408
E G++ G + +NR Y+ E T A NE + VQ R
Sbjct: 82 EIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQYLDHSKEVGRLENV 141
Query: 409 LGWIHTHPTQSCFMSSIDVHTHYSYQ 434
+GW H+HP C++S IDV+T + Q
Sbjct: 142 VGWYHSHPGYGCWLSGIDVNTQRTNQ 167
>sp|P91001|CSN5_CAEEL COP9 signalosome complex subunit 5 OS=Caenorhabditis elegans
GN=csn-5 PE=1 SV=1
Length = 368
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQA-- 391
Q+ IS + AK NLE G+L G + F I + E T A
Sbjct: 55 QIKISAIALLKMTMHAKRGG--NLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQA 112
Query: 392 ------TNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTH 430
T E+ + + ++ +GW H+HP C++S IDV T
Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKV-VGWYHSHPGYGCWLSGIDVSTQ 156
>sp|Q5BBF1|CSN5_EMENI COP9 signalosome complex subunit 5 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rri1 PE=1 SV=2
Length = 335
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNE 394
+ IS + + A+S +LE G++ G + F +T E T A +E
Sbjct: 51 VRISAVALLKMVMHARSG--GSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDE 108
Query: 395 EEIFEV-------QDKRSLFPLGWIHTHPTQSCFMSSIDVHTH 430
+ V + R +GW H+HP C++S IDV T
Sbjct: 109 ANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQ 151
>sp|Q4WZP2|CSN5_ASPFU COP9 signalosome complex subunit 5 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=csn5
PE=3 SV=2
Length = 334
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT-ALIIPKQ--ESTSDSCQATNEEEIFEVQDKRSLF 407
+ + +LE G++ G + F +T A +P + E+ ++ + NE + +Q R
Sbjct: 65 ARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAG 124
Query: 408 ----PLGWIHTHPTQSCFMSSIDVHTH 430
+GW H+HP C++S IDV T
Sbjct: 125 RMENAVGWYHSHPGYGCWLSGIDVTTQ 151
>sp|O35593|PSDE_MOUSE 26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus
GN=Psmd14 PE=1 SV=2
Length = 310
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
A D +E Q++IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQ 434
T S +A + + ++ ++ Q R +GW H+HP C++S +D++T S++
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE 134
>sp|O00487|PSDE_HUMAN 26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens
GN=PSMD14 PE=1 SV=1
Length = 310
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQES 384
A D +E Q++IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 AVDTAE--QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVRVIDVFAMPQSG 79
Query: 385 TSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQ 434
T S +A + + ++ ++ Q R +GW H+HP C++S +D++T S++
Sbjct: 80 TGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE 134
>sp|Q9V3H2|PSDE_DROME 26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila
melanogaster GN=Rpn11 PE=1 SV=1
Length = 308
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTSDSCQAT 392
Q++IS+ + +K ++ +E G++ G + + + + Q T S +A
Sbjct: 28 QVYISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAV 85
Query: 393 N---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQ 434
+ + ++ ++ Q R +GW H+HP C++S +D++T S++
Sbjct: 86 DPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE 132
>sp|Q75E19|CSN5_ASHGO COP9 signalosome complex subunit 5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRI1
PE=3 SV=1
Length = 420
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 346 MKLAKSNTDK-NLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
MK+ + D ++E G+L G +++ + E T A E + VQ
Sbjct: 81 MKILRHAFDGGDMEVLGMLLGYVQDEMIVVVDSYRLPVEGTETRVNAQMESYEYTVQYLE 140
Query: 405 SLFP-----LGWIHTHPTQSCFMSSIDVHT 429
+ P +GW H+HP C++S ID T
Sbjct: 141 TAVPEGLAIVGWYHSHPGYGCWLSGIDAET 170
>sp|Q6FT36|CSN5_CANGA COP9 signalosome complex subunit 5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRI1 PE=3 SV=1
Length = 465
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 348 LAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQ------ 401
L + N+E G+L G++ F I E T A E + VQ
Sbjct: 85 LCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMV 144
Query: 402 ------DKRSLFPLGWIHTHPTQSCFMSSIDVHT 429
++ +L +GW H+HP C++S+ID+ T
Sbjct: 145 ERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQT 178
>sp|O76577|PSDE_CAEEL 26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis
elegans GN=rpn-11 PE=1 SV=1
Length = 312
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 324 SDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQ 382
S+ D SE + +IS+ + +K ++ +E G++ G + + + + Q
Sbjct: 24 SNQVDTSETV--YISSLALLKMLKHGRAGVP--MEVMGLMLGEFVDDYTVNVIDVFAMPQ 79
Query: 383 ESTSDSCQATN---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQ 434
T S +A + + ++ ++ Q R +GW H+HP C++S +D++T S++
Sbjct: 80 SGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFE 136
>sp|Q6C703|CSN5_YARLI COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RRI1 PE=3 SV=1
Length = 354
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 357 LETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLG------ 410
+E G++ G + F + E T A E F V+ + L +G
Sbjct: 76 IEVMGMMTGKILPNTFVVMDCYPLPVEGTETRVNAQQEGIEFMVEYLQGLKDVGRRENIV 135
Query: 411 -WIHTHPTQSCFMSSIDVHTHYSYQ 434
W H+HP C++S IDV T + Q
Sbjct: 136 GWYHSHPGYGCWLSGIDVDTQFQNQ 160
>sp|P41883|YPT5_CAEEL Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans
GN=F37A4.5 PE=3 SV=1
Length = 319
Score = 38.9 bits (89), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTS------D 387
++IS+ + ++ A+S LE G++ G + + +T + Q TS D
Sbjct: 29 VNISSLALLKMLRHARSGIP--LEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVD 86
Query: 388 SCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQ 434
T ++ ++ R+ +GW H+HP C++SS+DV+T S++
Sbjct: 87 PVYQTKHMDLLKLVG-RTENVVGWYHSHPGFGCWLSSVDVNTQQSFE 132
>sp|P41878|RPN11_SCHPO 26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpn11 PE=1 SV=2
Length = 308
Score = 38.9 bits (89), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGS-LKNRKFYITALIIPKQESTSDSCQATN 393
++IS+ + ++ + T +E G++ G + + + + Q T S +A +
Sbjct: 30 VYISSLALLKMLRHGRHGTP--MEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVD 87
Query: 394 ---EEEIFEV--QDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQ 434
++ + ++ Q R +GW H+HP C++SS+D++T S++
Sbjct: 88 PVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFE 133
>sp|Q59PG6|CSN5_CANAL COP9 signalosome complex subunit 5 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=RRI1 PE=3 SV=1
Length = 213
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 18/131 (13%)
Query: 345 FMKLA-KSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQ-- 401
MK+ + T ++E G+L G + + E T A NE + V+
Sbjct: 82 LMKMCTHAQTGGSIEIMGMLVGKISGHSIIVMDTYRLPVEGTETRVNAQNEAYTYMVEYL 141
Query: 402 --------DKRSLFPLGWIHTHPTQSCFMSSIDVHTHY-------SYQVNVVPDARSCWK 446
K +GW H HP C++ IDV T Y VV ++ +
Sbjct: 142 TERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVVDPVKTLKQ 201
Query: 447 KRGEIGRKRNA 457
+ EIG RN
Sbjct: 202 GKVEIGAFRNV 212
>sp|O94454|CSN5_SCHPO COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn5 PE=1 SV=1
Length = 299
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 357 LETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDK---RSLF----PL 409
LE G + G ++ I E T A E + + VQ +S++ +
Sbjct: 55 LEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVI 114
Query: 410 GWIHTHPTQSCFMSSIDVHT 429
GW H+HP C++S +DV T
Sbjct: 115 GWYHSHPNYGCWLSGVDVET 134
>sp|O35864|CSN5_MOUSE COP9 signalosome complex subunit 5 OS=Mus musculus GN=Cops5 PE=1
SV=3
Length = 334
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 128
Query: 408 PL----GWIHTHPTQSCFMSSIDVHT 429
L GW H+HP C++S IDV T
Sbjct: 129 RLENAIGWYHSHPGYGCWLSGIDVST 154
>sp|Q8LAZ7|CSN5B_ARATH COP9 signalosome complex subunit 5b OS=Arabidopsis thaliana
GN=CSN5B PE=1 SV=2
Length = 357
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 16/136 (11%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYIT-ALIIPKQES-TSDSCQA 391
++HIS + + A+S +E G++ G + + A +P + + T + Q+
Sbjct: 58 RVHISALALLKMVVHARSG--GTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQS 115
Query: 392 TNEEEIFEVQDKRSLFP-----LGWIHTHPTQSCFMSSIDVHTHY---SYQ---VNVVPD 440
E + E L +GW H+HP C++S IDV T YQ + VV D
Sbjct: 116 DAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID 175
Query: 441 -ARSCWKKRGEIGRKR 455
R+ + EIG R
Sbjct: 176 PTRTVSAGKVEIGAFR 191
>sp|Q6P635|CSN5_XENTR COP9 signalosome complex subunit 5 OS=Xenopus tropicalis GN=cops5
PE=2 SV=1
Length = 334
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 128
Query: 408 PL----GWIHTHPTQSCFMSSIDVHT 429
L GW H+HP C++S IDV T
Sbjct: 129 RLENAIGWYHSHPGYGCWLSGIDVST 154
>sp|Q92905|CSN5_HUMAN COP9 signalosome complex subunit 5 OS=Homo sapiens GN=COPS5 PE=1
SV=4
Length = 334
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 69 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 128
Query: 408 PL----GWIHTHPTQSCFMSSIDVHT 429
L GW H+HP C++S IDV T
Sbjct: 129 RLENAIGWYHSHPGYGCWLSGIDVST 154
>sp|Q6PC30|CSN5_DANRE COP9 signalosome complex subunit 5 OS=Danio rerio GN=cops5 PE=2
SV=1
Length = 334
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 67 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 126
Query: 408 PL----GWIHTHPTQSCFMSSIDVHT 429
L GW H+HP C++S IDV T
Sbjct: 127 RLENAIGWYHSHPGYGCWLSGIDVST 152
>sp|Q6GLM9|CSN5_XENLA COP9 signalosome complex subunit 5 OS=Xenopus laevis GN=cops5 PE=2
SV=1
Length = 332
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 351 SNTDKNLETCGILAGSLKNRKFYIT---ALIIPKQESTSDSCQATNEEEIFEVQDKRSLF 407
+ + NLE G++ G + I AL + E+ ++ A E +++ + +
Sbjct: 67 ARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVG 126
Query: 408 PL----GWIHTHPTQSCFMSSIDVHT 429
L GW H+HP C++S IDV T
Sbjct: 127 RLENAIGWYHSHPGYGCWLSGIDVST 152
>sp|P33334|PRP8_YEAST Pre-mRNA-splicing factor 8 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PRP8 PE=1 SV=1
Length = 2413
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 375 TALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDVHTH 430
T +++P Q S Q +N +I ++ D L LGWIHT + FM++ +V TH
Sbjct: 2223 TVVLVP-QLGHVGSVQISNIPDIGDLPDTEGLELLGWIHTQTEELKFMAASEVATH 2277
>sp|Q9XZ58|CSN5_DROME COP9 signalosome complex subunit 5 OS=Drosophila melanogaster
GN=CSN5 PE=1 SV=1
Length = 327
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 351 SNTDKNLETCGILAGSLK-NRKFYITALIIPKQES-TSDSCQATNEEEIFEVQD-----K 403
+ + LE G++ G ++ N + A +P + + T + QA E + +
Sbjct: 66 ARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVG 125
Query: 404 RSLFPLGWIHTHPTQSCFMSSIDVHTH 430
R +GW H+HP C++S IDV T
Sbjct: 126 RMEHAVGWYHSHPGYGCWLSGIDVSTQ 152
>sp|Q6CRJ8|CSN5_KLULA COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=RRI1 PE=3 SV=1
Length = 373
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 337 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 396
++TT M L+ + ++E G+L G N + + T A E
Sbjct: 71 LATTKM-----LSHAVDGGDIEVMGMLVGYTSNDMIVVKDCYSLPVQGTETRVNAHMESY 125
Query: 397 IFEVQDKRSLFP-----LGWIHTHPTQSCFMSSIDVHT 429
+ VQ + +GW H+HP C++S+ID+ T
Sbjct: 126 EYMVQYLDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQT 163
>sp|Q8SQY3|RPN11_ENCCU 26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=RPN11 PE=1 SV=1
Length = 294
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 328 DRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSD 387
D SE +Q IS+ + +K ++ LE G++ G + ++ + + + +
Sbjct: 16 DASETVQ--ISSLALLKMLKHGRAGIP--LEVMGLMLGEFVD-EYTVKVVDVFAMPQSGT 70
Query: 388 SCQATNEEEIFEVQ-------DKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQ 434
+ + + IF+++ R +GW H+HP C++S++D+ T S++
Sbjct: 71 NVTVESVDPIFQMEMMSILKATGRHETVVGWYHSHPGFGCWLSTVDISTQQSFE 124
>sp|Q6BMQ3|CSN5_DEBHA COP9 signalosome complex subunit 5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RRI1 PE=3 SV=2
Length = 469
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 357 LETCGILAGSL-KNRKFYITALIIPKQES-TSDSCQATNEEEIFEV-----QDKRSLFPL 409
+E G++ G + KN + +P + + T + QA E + + Q R +
Sbjct: 83 IEVMGMMTGKIIKNSIIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENSKQVGRDENIV 142
Query: 410 GWIHTHPTQSCFMSSIDVHT 429
GW H+HP C++S IDV T
Sbjct: 143 GWYHSHPGYGCWLSGIDVAT 162
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,243,300
Number of Sequences: 539616
Number of extensions: 6582044
Number of successful extensions: 15441
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 15329
Number of HSP's gapped (non-prelim): 163
length of query: 460
length of database: 191,569,459
effective HSP length: 121
effective length of query: 339
effective length of database: 126,275,923
effective search space: 42807537897
effective search space used: 42807537897
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)