Citrus Sinensis ID: 012608
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 460 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.982 | 0.928 | 0.798 | 0.0 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.969 | 0.871 | 0.652 | 0.0 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.932 | 0.922 | 0.468 | 1e-117 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.593 | 0.665 | 0.328 | 2e-37 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.602 | 0.672 | 0.334 | 3e-37 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.610 | 0.722 | 0.316 | 1e-36 | |
| O49839 | 426 | Protein kinase 2A, chloro | no | no | 0.65 | 0.701 | 0.313 | 3e-36 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.604 | 0.703 | 0.320 | 4e-36 | |
| O49840 | 426 | Protein kinase 2B, chloro | no | no | 0.606 | 0.654 | 0.308 | 2e-35 | |
| Q9CAH1 | 450 | Putative receptor-like pr | no | no | 0.669 | 0.684 | 0.302 | 2e-35 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/452 (79%), Positives = 407/452 (90%)
Query: 3 EVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMA 62
E + LP FREF++E ++NATSGFA ENIVSEHGE+APNVVYKGKLENQRRIAVKRFNR +
Sbjct: 34 ESNDLPQFREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLENQRRIAVKRFNRKS 93
Query: 63 WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMK 122
WPD RQFLEEA++VGQLRN+R+ NLLGCC E +ERLL+AE+MPNETLAKHLFHWE+ PMK
Sbjct: 94 WPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMK 153
Query: 123 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182
WAMRLRV LH+AQALEYCTSKGRALYHDLNAYR+LFD+D NPRLS FGLMKNSRDGKSYS
Sbjct: 154 WAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYS 213
Query: 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 242
TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN+QML DS L
Sbjct: 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGL 273
Query: 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASV 302
EGQF+ DDGTEL+RLASRCLQYEPRERPNPKSLV+A+ PLQK+ E+ SH L+G+P+SA+
Sbjct: 274 EGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATT 333
Query: 303 SPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAF 362
+ LSPLGEAC R DLTAIHEI+EK+ YKDDEG ELSFQMWTDQMQ+TL KKKGD AF
Sbjct: 334 TALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAF 393
Query: 363 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 422
R KD AIECY+QFI+ GTM SPTV+AR+SLCYLM+DMP++ALN+AMQAQ+ISP WHIA
Sbjct: 394 RHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIA 453
Query: 423 SYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454
SYLQA ALSA+G ENEA ALK+G LE+K+N
Sbjct: 454 SYLQAVALSALGQENEAHTALKDGAMLESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 634 bits (1634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/452 (65%), Positives = 365/452 (80%), Gaps = 6/452 (1%)
Query: 7 LPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP 66
+PSF EF+ LK AT+ F+ +NIVSE GEKAPN+VYKG+L+N+R IAVK+F +MAWP+P
Sbjct: 55 IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114
Query: 67 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 126
+QF EEA VG+LR+NRL NL+G CC+GDERLLVAE+MPN+TLAKHLFHWE ++WAMR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174
Query: 127 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 186
LRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+PRLS FGLMKNSRDGKSYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234
Query: 187 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 246
+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +N+ +L DS LEG+F
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294
Query: 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH-----SAS 301
+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ +++VPS+V++GI S
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
PLSPLGEACSR DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K+GD +
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKRGDQS 413
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+ D P AL DAMQAQ + P W
Sbjct: 414 FREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPT 473
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453
A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 474 AFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/450 (46%), Positives = 299/450 (66%), Gaps = 21/450 (4%)
Query: 8 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPR 67
P +F+ LK AT+ F+ ENIVS+ + +VV+KG+L+N +A+KRFN MAW DP+
Sbjct: 33 PPLTKFSFSALKTATNHFSPENIVSD---QTSDVVFKGRLQNGGFVAIKRFNNMAWSDPK 89
Query: 68 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 127
FLEEA+ VG+LR+ RL NL+G CC+GD+R LVA++M N+TLAK LF + M W++RL
Sbjct: 90 LFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRL 149
Query: 128 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 187
RV +A+AL+YC + G A Y++L+AY++LFDEDG+ LS FGLMK + +
Sbjct: 150 RVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------- 201
Query: 188 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247
+ TG V PE+VIY FGT+L++LLSGK IPPSHA ++I +N+ L D L+G+F+
Sbjct: 202 -----ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFS 256
Query: 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH----SASVS 303
D+ + +LAS+CL+YE +E PN K +V L LQ TE PS+ ++ + + ++S S
Sbjct: 257 IDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSS 316
Query: 304 PLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFR 363
LSPLGEAC R DL +IH IL Y DD+ + ELSF+ W +++E + ++ GD AF
Sbjct: 317 NLSPLGEACLRMDLASIHSILVLAGYDDDKDII-ELSFEEWIQEVKELQDVRRNGDRAFV 375
Query: 364 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 423
++D K AI CY+QF++ ++V P+VYARRSL YL D P+ AL D M AQ + P W A
Sbjct: 376 EQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAF 435
Query: 424 YLQAAALSAMGMENEAQVALKEGTTLEAKK 453
YLQ+ AL+ + M ++ LKE LE KK
Sbjct: 436 YLQSVALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 163/307 (53%), Gaps = 34/307 (11%)
Query: 8 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQR----------RIAVKR 57
P+ + F+ +LK+AT F ++++ GE V+KG ++ + IAVK+
Sbjct: 51 PNLKSFSFAELKSATRNFRPDSVL---GEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKK 107
Query: 58 FNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE 117
N+ W +++L E +GQ + L L+G C E + RLLV E+MP +L HLF
Sbjct: 108 LNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 167
Query: 118 TH--PMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174
+ P+ W +RL+V L A+ L + +S+ R +Y D IL D + N +LS FGL K+
Sbjct: 168 LYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKD 227
Query: 175 SRDG-KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSH 224
G KS+ ST + + PEYL TG +T +S +YSFG +LL+LLSG+ PS
Sbjct: 228 GPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSG 287
Query: 225 ALD--------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
+ L+ R + + D+ L+ Q++ ++ ++ L+ RCL E + RPN +V
Sbjct: 288 ERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVV 347
Query: 277 TALSPLQ 283
+ L +Q
Sbjct: 348 SHLEHIQ 354
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 166/311 (53%), Gaps = 34/311 (10%)
Query: 8 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQR----------RIAVKR 57
P+ + FT +LK AT F ++++ E G + V+KG ++ Q IAVK+
Sbjct: 52 PNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVKK 108
Query: 58 FNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE 117
N+ W +++L E +GQ + L L+G C E + RLLV E+MP +L HLF
Sbjct: 109 LNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 168
Query: 118 TH--PMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174
++ P+ W +RL+V L A+ L + ++ +Y D IL D + N +LS FGL K+
Sbjct: 169 SYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKD 228
Query: 175 SRDG-KSY-STNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPS 223
G KS+ ST + + PEYL TG +T +S +YS+G +LL++LSG K+ PP
Sbjct: 229 GPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPG 288
Query: 224 H------ALDLIRD-RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
A L+ + R L + D+ L+ Q++ ++ ++ LA RCL +E + RPN +V
Sbjct: 289 EQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348
Query: 277 TALSPLQKETE 287
+ L +Q E
Sbjct: 349 SHLEHIQTLNE 359
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 159/316 (50%), Gaps = 35/316 (11%)
Query: 9 SFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR----------IAVKRF 58
+ + F+ +LK AT F +++V GE V++G L+ IAVKR
Sbjct: 45 TVKSFSFNELKLATRNFRSDSVV---GEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRL 101
Query: 59 NRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF---H 115
N + R++L E +GQL + L L+G C E ++RLLV E+M +L HLF +
Sbjct: 102 NPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGN 161
Query: 116 WETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKN 174
+ P+ W +R++V L A+ L + S + +Y D+ A IL D D N +LS FGL ++
Sbjct: 162 KDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARD 221
Query: 175 SRDG-KSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSH 224
G +SY + + PEY+ TG + S +YSFG +LL+LL G+ H P+
Sbjct: 222 GPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAK 281
Query: 225 ALDLI--------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
+L+ R + ++ D+ L Q+ + L +A +CL +EP+ RP +V
Sbjct: 282 EQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVV 341
Query: 277 TALSPLQKETEVPSHV 292
AL LQ P++V
Sbjct: 342 RALVQLQDSVVKPANV 357
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 166/344 (48%), Gaps = 45/344 (13%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR--------- 52
E+ P+ + FT +LKNAT F +N++ GE V+KG ++
Sbjct: 63 GEILSSPNLKAFTFNELKNATKNFRQDNLL---GEGGFGCVFKGWIDQTSLTASRPGSGI 119
Query: 53 -IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 111
+AVK+ + +++L E +GQL + L L+G C EG+ RLLV E+MP +L
Sbjct: 120 VVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLEN 179
Query: 112 HLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFG 170
HLF P+ WA+R++V + A+ L + +K + +Y D A IL D D N +LS FG
Sbjct: 180 HLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFG 239
Query: 171 LMKN--SRDGKSYSTNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 224
L K + D ST + + PEY+ TGR+T +S +YSFG +LL+L+SG+
Sbjct: 240 LAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR-----R 294
Query: 225 ALD-----------------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267
A+D L R L + D+ L GQ+ LA +CL + +
Sbjct: 295 AMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAK 354
Query: 268 ERPNPKSLVTALSPLQKETEVPS-HVLMGIP--HSASVSPLSPL 308
RP ++ L L+ + + H M P H +SV SP+
Sbjct: 355 LRPKMSEVLVTLEQLESVAKPGTKHTQMESPRFHHSSVMQKSPV 398
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 34/312 (10%)
Query: 11 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR----------IAVKRFNR 60
+ FT +LK AT F ++++ GE V+KG L+ IAVK+ N+
Sbjct: 53 KSFTFNELKLATRNFRPDSVI---GEGGFGCVFKGWLDESTLTPTKPGTGLVIAVKKLNQ 109
Query: 61 MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH- 119
+ R++L E +GQL + L L+G C E + RLLV E+M +L HLF +
Sbjct: 110 EGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRRGAYF 169
Query: 120 -PMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177
P+ W +R+ V L A+ L + S + +Y D+ A IL D D N +LS FGL ++
Sbjct: 170 KPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPM 229
Query: 178 GK-SYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALD 227
G SY + + PEY+ +G + S +YSFG LLL++LSGK H P+ +
Sbjct: 230 GDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEEN 289
Query: 228 LI--------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
L+ R + ++ D+ L+ Q+ ++ + +A +CL +EP+ RP +V AL
Sbjct: 290 LVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRAL 349
Query: 280 SPLQKETEVPSH 291
LQ PS
Sbjct: 350 QQLQDNLGKPSQ 361
|
Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 152/311 (48%), Gaps = 32/311 (10%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQR---------- 51
E+ P+ + FT +LKNAT F ++++ E G V+KG ++
Sbjct: 60 GEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGF---GYVFKGWIDGTTLTASKPGSGI 116
Query: 52 RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 111
+AVK+ + +++L E +GQL + L L+G C EG+ RLLV E+MP +L
Sbjct: 117 VVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLEN 176
Query: 112 HLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDGNPRLSTFG 170
HLF P+ WA+R++V + A+ L + +K + +Y D A IL D + N +LS FG
Sbjct: 177 HLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFG 236
Query: 171 LMKNSRDGKS--YSTNL----AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 224
L K G ST + + PEY+ TGR+T +S +YSFG +LL+LLSG+
Sbjct: 237 LAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKS 296
Query: 225 ALDLIRD------------RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 272
+ + + R L + D+ L GQ+ LA +CL + + RP
Sbjct: 297 KVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKM 356
Query: 273 KSLVTALSPLQ 283
++ L L+
Sbjct: 357 SEVLAKLDQLE 367
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9CAH1|Y1725_ARATH Putative receptor-like protein kinase At1g72540 OS=Arabidopsis thaliana GN=At1g72540 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 166/340 (48%), Gaps = 32/340 (9%)
Query: 13 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRR-------IAVKRFNRMAWPD 65
FT E+LK T GF+ N + GE VYKG +++ + +AVK R
Sbjct: 72 FTYEELKTITQGFSKYNFL---GEGGFGEVYKGFVDDSLKTGLKDQPVAVKALKREGGQG 128
Query: 66 PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAM 125
R++L E +GQL++ L NL+G CCE DERLLV EYM L HLF + W
Sbjct: 129 HREWLAEVIILGQLKHPHLVNLVGYCCEDDERLLVYEYMERGNLEDHLFQKYGGALPWLT 188
Query: 126 RLRVVLHLAQALEYCTSKGR-ALYHDLNAYRILFDEDGNPRLSTFGLM------KNSRDG 178
R++++L A+ LE+ + + +Y D IL D + +LS FGL ++S
Sbjct: 189 RVKILLGAAKGLEFLHKQEKPVIYRDFKPSNILLSSDFSSKLSDFGLATDGSEEEDSNFT 248
Query: 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-----------ALD 227
KS + PEY+ G +T S ++SFG +LL++L+ + + A
Sbjct: 249 KSVMGTEGYAAPEYISAGNLTTMSDVFSFGVVLLEMLTARKAVEKYRAQRGRNLVEWARP 308
Query: 228 LIRDRN-LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286
+++D N L+ + D LEG+++ + + LA +CL + P+ RP ++V L P+
Sbjct: 309 MLKDPNKLERIIDPSLEGKYSVEGIRKAAALAYQCLSHNPKSRPTMTTVVKTLEPILDLK 368
Query: 287 EVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEK 326
++ + + I A VS + E + D+ + E EK
Sbjct: 369 DIQNGPFVYIVPVAGVSEVH---EIKCKDDVKVVKEETEK 405
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 460 | ||||||
| 225454188 | 491 | PREDICTED: probable serine/threonine-pro | 0.997 | 0.934 | 0.897 | 0.0 | |
| 356520418 | 491 | PREDICTED: probable serine/threonine-pro | 0.997 | 0.934 | 0.880 | 0.0 | |
| 255541562 | 493 | receptor protein kinase, putative [Ricin | 0.997 | 0.931 | 0.877 | 0.0 | |
| 356504529 | 491 | PREDICTED: probable serine/threonine-pro | 0.989 | 0.926 | 0.881 | 0.0 | |
| 224127648 | 491 | predicted protein [Populus trichocarpa] | 0.997 | 0.934 | 0.869 | 0.0 | |
| 224064025 | 491 | predicted protein [Populus trichocarpa] | 0.997 | 0.934 | 0.860 | 0.0 | |
| 357507281 | 492 | hypothetical protein MTR_7g077150 [Medic | 0.995 | 0.930 | 0.849 | 0.0 | |
| 225426412 | 488 | PREDICTED: probable serine/threonine-pro | 0.991 | 0.934 | 0.857 | 0.0 | |
| 297814269 | 490 | kinase family protein [Arabidopsis lyrat | 0.984 | 0.924 | 0.850 | 0.0 | |
| 22328189 | 489 | BR-signaling kinase 3 [Arabidopsis thali | 0.982 | 0.924 | 0.852 | 0.0 |
| >gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/459 (89%), Positives = 434/459 (94%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SEVD LP F E+T EQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNR+
Sbjct: 33 SEVDYLPVFCEYTFEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRV 92
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQF EEAR+VGQLRN+RL NLLGCCCE +ERLLVAEYMPNETLAKHLFHWET PM
Sbjct: 93 AWPDARQFSEEARAVGQLRNHRLANLLGCCCEDNERLLVAEYMPNETLAKHLFHWETQPM 152
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KWAMRLRVVLHLAQALEYCT +GRALYHDLNAYRILFDEDGNPRLS FGLMKNSRDGKSY
Sbjct: 153 KWAMRLRVVLHLAQALEYCTGRGRALYHDLNAYRILFDEDGNPRLSCFGLMKNSRDGKSY 212
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC
Sbjct: 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 272
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
LEGQFT+DDGTELVRLASRCLQYEPRERPNPKSLV AL+PLQKETEVPSHVLMGIPHSAS
Sbjct: 273 LEGQFTNDDGTELVRLASRCLQYEPRERPNPKSLVAALTPLQKETEVPSHVLMGIPHSAS 332
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
SPLSPLGEACSR DLTAIHEILE + YKDDEG+ NELSFQMWTDQMQETLNSKKKGD A
Sbjct: 333 FSPLSPLGEACSRMDLTAIHEILESVGYKDDEGMTNELSFQMWTDQMQETLNSKKKGDAA 392
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FRQKD + AI+CYTQFID GTMVSPTV ARRSLCYLMSDMPQ+ALNDAMQAQ+ISP+WHI
Sbjct: 393 FRQKDFRAAIDCYTQFIDVGTMVSPTVCARRSLCYLMSDMPQEALNDAMQAQVISPVWHI 452
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
ASYLQAAAL+ +GMENEAQ ALK+GTTLEA++N+ +GQK
Sbjct: 453 ASYLQAAALTGLGMENEAQAALKDGTTLEAQRNTPSGQK 491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520418|ref|XP_003528859.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/459 (88%), Positives = 432/459 (94%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SEV P+FRE+TLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQ RIAVKRFNR
Sbjct: 33 SEVSNWPTFREYTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRN 92
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQFLEEARSVGQLRN RL NLLGCCCEG+ERLLVAEYMPNETLAKHLFHWET PM
Sbjct: 93 AWPDARQFLEEARSVGQLRNQRLANLLGCCCEGEERLLVAEYMPNETLAKHLFHWETQPM 152
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR+LFDEDGNPRLS+FGLMKNSRDGKSY
Sbjct: 153 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSY 212
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD+IR RNLQMLTDSC
Sbjct: 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDSC 272
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
LEGQF+DDDGTELVRLASRCLQYEPRERPNPKSLV AL+PLQKETEVPSHVLMGI HS +
Sbjct: 273 LEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVVALAPLQKETEVPSHVLMGIQHSTT 332
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
+ LSPLGEACSR+DLTAI E+LE I YKDDEGVANELSF MWTDQMQ+TLN KKKGDVA
Sbjct: 333 FASLSPLGEACSRKDLTAIQEVLESIGYKDDEGVANELSFHMWTDQMQDTLNCKKKGDVA 392
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FRQKD + AIECY+QFIDAGTMVSPTVYARRSLCYL+SDMPQ++LNDA+QAQI+SP+WHI
Sbjct: 393 FRQKDFRLAIECYSQFIDAGTMVSPTVYARRSLCYLISDMPQESLNDAIQAQIVSPVWHI 452
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
ASYLQ+ AL+ +GMENEAQ ALKEGTT+E+K+N+T QK
Sbjct: 453 ASYLQSVALTGLGMENEAQAALKEGTTMESKRNATPKQK 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541562|ref|XP_002511845.1| receptor protein kinase, putative [Ricinus communis] gi|223549025|gb|EEF50514.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 865 bits (2234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/459 (87%), Positives = 435/459 (94%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SE+D LP+FREFT EQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRI VKRFNRM
Sbjct: 35 SEIDYLPAFREFTFEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIVVKRFNRM 94
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQFLEEAR VGQLRN+RL NLLGCCCEGDERLLVAEY+PNETLAKHLFHWET PM
Sbjct: 95 AWPDARQFLEEARFVGQLRNHRLANLLGCCCEGDERLLVAEYLPNETLAKHLFHWETQPM 154
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KWAMRLRV LHLA+ALEYCTSKGRALYHDLNAYRILFDEDGNPRLS+FGLMKNSRDGKSY
Sbjct: 155 KWAMRLRVALHLAEALEYCTSKGRALYHDLNAYRILFDEDGNPRLSSFGLMKNSRDGKSY 214
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGRVTPESVIYSFGTLL+DLLSGKHIPP+HALDLIRDRNLQMLTDSC
Sbjct: 215 STNLAFTPPEYLRTGRVTPESVIYSFGTLLVDLLSGKHIPPNHALDLIRDRNLQMLTDSC 274
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
LEGQF++DDGTELVRLASRCLQYE RERP+ KSLV AL+PLQKETEVPSHVLMGIPHSAS
Sbjct: 275 LEGQFSNDDGTELVRLASRCLQYELRERPSSKSLVAALTPLQKETEVPSHVLMGIPHSAS 334
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
+SPLSP+GEACSR+DLTAIHEIL+ + YKDDEGV NELSFQMWTD+MQETL KKKGD A
Sbjct: 335 LSPLSPIGEACSRKDLTAIHEILDGLGYKDDEGVTNELSFQMWTDEMQETLTFKKKGDSA 394
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
F+QKDL+DAIECYTQFIDAGTMVSPT++ARRSL +LM+DMPQ+ALNDAMQAQ+ISP+WH+
Sbjct: 395 FKQKDLRDAIECYTQFIDAGTMVSPTLFARRSLSFLMTDMPQEALNDAMQAQVISPVWHV 454
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
ASYLQA AL +GME EAQVALKEGT LEA+KN+T+ QK
Sbjct: 455 ASYLQAVALGVLGMETEAQVALKEGTNLEAQKNATSEQK 493
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356504529|ref|XP_003521048.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/455 (88%), Positives = 429/455 (94%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SE P+FREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQ RIAVKRFNR
Sbjct: 33 SEASNWPTFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRN 92
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQFLEE+RSVGQLRN RL NLLGCCCEG+ERLLVAEYMPNETLAKHLFHWET PM
Sbjct: 93 AWPDARQFLEESRSVGQLRNQRLANLLGCCCEGEERLLVAEYMPNETLAKHLFHWETQPM 152
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR+LFDEDGNPRLS+FGLMKNSRDGKSY
Sbjct: 153 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSY 212
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD+IR RNLQMLTDSC
Sbjct: 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDVIRGRNLQMLTDSC 272
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
LEGQF+DDDGTELVRLASRCLQYEPRERPNPKSLV AL+PLQKETEV SH+LMGI HS +
Sbjct: 273 LEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVLSHILMGIQHSTT 332
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
+ LSPLGEACSR+DLTAIHE+LE + YKDDEGVANELSFQMWTDQMQ+TLN KKKGDVA
Sbjct: 333 FASLSPLGEACSRKDLTAIHEVLESLGYKDDEGVANELSFQMWTDQMQDTLNCKKKGDVA 392
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FRQKD + AIECY+QFID GTMVSPTVYARRSLCYL+SDMPQ+ALNDAMQA++ISP+WHI
Sbjct: 393 FRQKDFRLAIECYSQFIDTGTMVSPTVYARRSLCYLISDMPQEALNDAMQAEVISPVWHI 452
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 456
ASYLQ+ AL+ +GMENEAQ ALKEGTTLE+K+N+T
Sbjct: 453 ASYLQSVALTGLGMENEAQAALKEGTTLESKRNAT 487
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127648|ref|XP_002320126.1| predicted protein [Populus trichocarpa] gi|222860899|gb|EEE98441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/459 (86%), Positives = 430/459 (93%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SEV+ LP+FREFT EQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM
Sbjct: 33 SEVNDLPTFREFTFEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 92
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQFLEEARSVGQLRNNRL NLLGCCCEGDERLLVAE+MPNETLAKHLFHWET P+
Sbjct: 93 AWPDARQFLEEARSVGQLRNNRLVNLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPI 152
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KWAMRLRVVLHLA+ALEYCTSKGRALYHDLNAYRILFDEDGNP+LS+FGLMKNSRDGKSY
Sbjct: 153 KWAMRLRVVLHLAEALEYCTSKGRALYHDLNAYRILFDEDGNPKLSSFGLMKNSRDGKSY 212
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGRVTPESVIYSFGTLLLD LSGKHIPPSHALDLIRDRNLQMLTDSC
Sbjct: 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDHLSGKHIPPSHALDLIRDRNLQMLTDSC 272
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
LEGQF++DDGTELVRLASRCLQYE RERP+ K LV AL+PLQKET+V SH+LMGIPHSAS
Sbjct: 273 LEGQFSNDDGTELVRLASRCLQYELRERPSLKFLVAALTPLQKETDVASHILMGIPHSAS 332
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
SPLSP GEAC R+DLTAIHEIL+ I YKDD+GVANELSFQMWTD+MQETLN+KKKGD +
Sbjct: 333 SSPLSPFGEACLRKDLTAIHEILDNIGYKDDQGVANELSFQMWTDEMQETLNTKKKGDAS 392
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
F+QKD + AIECYTQFID GTMVSPTV+ARRSL YLMSDMPQ+ L+DAMQAQ+ISP+WH+
Sbjct: 393 FKQKDFRVAIECYTQFIDVGTMVSPTVFARRSLSYLMSDMPQEGLSDAMQAQVISPVWHV 452
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
ASYLQA AL+ +GMENEA ALKEGT +EAKKN +GQK
Sbjct: 453 ASYLQAVALATLGMENEAHAALKEGTNIEAKKNQDSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224064025|ref|XP_002301354.1| predicted protein [Populus trichocarpa] gi|222843080|gb|EEE80627.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/459 (86%), Positives = 431/459 (93%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SEV+ LP+FREFTLEQLKNATSGFAV+NIVSEHGEKAPNVVYKGKLENQRRIAVKRFN+M
Sbjct: 33 SEVNDLPTFREFTLEQLKNATSGFAVQNIVSEHGEKAPNVVYKGKLENQRRIAVKRFNKM 92
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQFLEEARSVGQLR++RL NLLG CCEGDER+LVAE+M NETLAKHLFHWET P+
Sbjct: 93 AWPDARQFLEEARSVGQLRSHRLVNLLGFCCEGDERVLVAEFMLNETLAKHLFHWETQPI 152
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KW MRLRVVLHLA+ALEYCTSKGRALYHDLNAYRILFDEDGNP+LS+FGLMKNSRDGKSY
Sbjct: 153 KWPMRLRVVLHLAEALEYCTSKGRALYHDLNAYRILFDEDGNPKLSSFGLMKNSRDGKSY 212
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC
Sbjct: 213 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 272
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
LEGQF+ DDGTELVRLASRCLQYE RERP+ KSLV AL+PLQKE +VPSH+LMGIPH AS
Sbjct: 273 LEGQFSSDDGTELVRLASRCLQYELRERPSLKSLVAALTPLQKENDVPSHILMGIPHGAS 332
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
SPLSP GEACSRRDLTAI+EIL+ I YKDD+GVANELSFQMWTD+MQETLN+KKKGD A
Sbjct: 333 SSPLSPFGEACSRRDLTAINEILDNIGYKDDQGVANELSFQMWTDEMQETLNTKKKGDSA 392
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
F+QKD + AIECYTQFID GTMVSPTV+ARRSL YLMSD+PQ+AL+DAMQAQ+ISP+WH+
Sbjct: 393 FKQKDYRIAIECYTQFIDVGTMVSPTVFARRSLSYLMSDLPQEALSDAMQAQVISPVWHV 452
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
ASYLQA AL+ +GMENEA ALKEGT LEA+KN+ +GQK
Sbjct: 453 ASYLQAVALATLGMENEAHAALKEGTNLEAEKNANSGQK 491
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507281|ref|XP_003623929.1| hypothetical protein MTR_7g077150 [Medicago truncatula] gi|355498944|gb|AES80147.1| hypothetical protein MTR_7g077150 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/459 (84%), Positives = 424/459 (92%), Gaps = 1/459 (0%)
Query: 3 EVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMA 62
E + PSFREFTLEQL NATSGF VENIVSEHGEKAPNVVYKGK+ENQ RI VKRFNR A
Sbjct: 34 ETNDGPSFREFTLEQLNNATSGFNVENIVSEHGEKAPNVVYKGKMENQTRIVVKRFNRSA 93
Query: 63 WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMK 122
WPD RQFLEEARSVGQLR+ RL NLLGCCCE DERLLVAEYMPNETLAKHLFHW++ PMK
Sbjct: 94 WPDARQFLEEARSVGQLRSERLANLLGCCCEDDERLLVAEYMPNETLAKHLFHWDSQPMK 153
Query: 123 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182
WAMRLRVVLHLA+ALEYCTS GRALYHDLNAYR+LFDEDGNPRLS+FGLMKNSRDGKSYS
Sbjct: 154 WAMRLRVVLHLAEALEYCTSNGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYS 213
Query: 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 242
TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN+QMLTDSCL
Sbjct: 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCL 273
Query: 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASV 302
EGQF++DDGTELVRLASRCLQYEPRERPN KSLV AL+PLQKETEVPSH LMGI HSA++
Sbjct: 274 EGQFSEDDGTELVRLASRCLQYEPRERPNTKSLVAALAPLQKETEVPSHSLMGIQHSATI 333
Query: 303 SP-LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
S LSPLG+ACSR+DLTAIHE+LE I YKDD+GVANELSFQMWTDQMQ++LN K+KGD A
Sbjct: 334 SASLSPLGDACSRKDLTAIHEVLENIGYKDDDGVANELSFQMWTDQMQDSLNCKQKGDAA 393
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FR KD K AIECYTQFID GTMVSPTV+ARRSLCYL++DMPQ+A+NDAMQAQ+ISP+WHI
Sbjct: 394 FRHKDFKLAIECYTQFIDVGTMVSPTVHARRSLCYLINDMPQEAMNDAMQAQVISPLWHI 453
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
ASYLQ+ +LS +GM NEAQVAL EGTTLE K+N+ G+K
Sbjct: 454 ASYLQSVSLSGLGMVNEAQVALMEGTTLEEKRNTPTGKK 492
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/456 (85%), Positives = 421/456 (92%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SE D LP+F E+T++QL+ ATSGFA ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFN+
Sbjct: 33 SEADDLPAFHEYTIDQLRMATSGFAAENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNKS 92
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQFLEEARSVGQLRN+RL NLLGCC EGDERLLVAE+MPN+TLAKHLFHWET PM
Sbjct: 93 AWPDARQFLEEARSVGQLRNHRLANLLGCCSEGDERLLVAEFMPNDTLAKHLFHWETQPM 152
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KWAMRLRV L+LAQALEYCTSKGRALYHDLNAYRI+FD+DG+PRLS FG+MKNSRDGKSY
Sbjct: 153 KWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRIVFDDDGDPRLSCFGMMKNSRDGKSY 212
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGRVTPESV+YSFGTLLLDLLSGKHIPPSHALDLIRDRN+QMLTDSC
Sbjct: 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLTDSC 272
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
LEGQF+ DDGTELVRLASRCLQYEPRERPNPKSLV AL PLQKETEVPSHVLMG+P S +
Sbjct: 273 LEGQFSSDDGTELVRLASRCLQYEPRERPNPKSLVAALIPLQKETEVPSHVLMGMPQSGA 332
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
PLSPLGEAC R DLTAIHEILEK+ YKDDEG ELSFQMWT+QMQETLNSKKKGDVA
Sbjct: 333 TLPLSPLGEACLRMDLTAIHEILEKLGYKDDEGATTELSFQMWTNQMQETLNSKKKGDVA 392
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FR KD + AIECYTQFID GTMVSPTV+ARRSLCYLMSDMPQ+ALNDA+QAQ+ISPIWHI
Sbjct: 393 FRHKDFRAAIECYTQFIDVGTMVSPTVFARRSLCYLMSDMPQEALNDAVQAQVISPIWHI 452
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457
ASYLQA ALSA+G ENE++V LKEG+ LE KKN TA
Sbjct: 453 ASYLQAVALSALGRENESEVTLKEGSVLEEKKNKTA 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297814269|ref|XP_002875018.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320855|gb|EFH51277.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2149), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/454 (85%), Positives = 427/454 (94%), Gaps = 1/454 (0%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SE+ +P+FRE+TLEQLK ATSGFAVE IVSEHGEKAPNVVYKGKLENQ++IAVKRF RM
Sbjct: 33 SEITDVPNFREYTLEQLKAATSGFAVEYIVSEHGEKAPNVVYKGKLENQKKIAVKRFTRM 92
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQFLEEARSVGQLR+ R+ NLLGCCCEGDERLLVAE+MPNETLAKHLFHWET PM
Sbjct: 93 AWPDARQFLEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPM 152
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KW MRLRVVL+LAQALEYCTSKGR LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSY
Sbjct: 153 KWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSY 212
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGR+TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ LTDSC
Sbjct: 213 STNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSC 272
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
L+GQF+D DGTELVRLASRCLQYE RERPN KSLVTAL+PLQK+TEVPSHVLMG+PHS S
Sbjct: 273 LDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKDTEVPSHVLMGLPHSGS 332
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
VSPLSPLGEACSRRDLTA+ EIL+K+ YKDDEGV NELSFQMWTDQMQE+LNSKKKGDVA
Sbjct: 333 VSPLSPLGEACSRRDLTAMLEILDKLGYKDDEGVTNELSFQMWTDQMQESLNSKKKGDVA 392
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FRQKD ++AIECYTQFID G M+SPTV ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH+
Sbjct: 393 FRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHV 451
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 455
ASYLQ+A+L+ +GME E+Q+ALKEG+ LEAK+N+
Sbjct: 452 ASYLQSASLAFLGMEKESQIALKEGSNLEAKRNA 485
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22328189|ref|NP_191980.2| BR-signaling kinase 3 [Arabidopsis thaliana] gi|17064838|gb|AAL32573.1| Unknown protein [Arabidopsis thaliana] gi|20259854|gb|AAM13274.1| unknown protein [Arabidopsis thaliana] gi|332656524|gb|AEE81924.1| BR-signaling kinase 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/453 (85%), Positives = 422/453 (93%), Gaps = 1/453 (0%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SE+ +P+FRE+TLEQLK ATSGFAVE IVSEHGEKAPNVVYKGKLENQ++IAVKRF RM
Sbjct: 32 SEITDVPNFREYTLEQLKAATSGFAVEYIVSEHGEKAPNVVYKGKLENQKKIAVKRFTRM 91
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQFLEEARSVGQLR+ R+ NLLGCCCEGDERLLVAE+MPNETLAKHLFHWET PM
Sbjct: 92 AWPDSRQFLEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPM 151
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KW MRLRVVL+LAQALEYCTSKGR LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSY
Sbjct: 152 KWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSY 211
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGR+TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ LTDSC
Sbjct: 212 STNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSC 271
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
L+GQF+D DGTELVRLASRCLQYE RERPN KSLVTAL+PLQKETEV SHVLMG+PHS S
Sbjct: 272 LDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGLPHSGS 331
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
VSPLSPLGEACSRRDLTA+ EILEK+ YKDDEGV NELSF MWTDQMQE+LNSKKKGDVA
Sbjct: 332 VSPLSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVA 391
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FRQKD ++AIECYTQFID G M+SPTV ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH+
Sbjct: 392 FRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHV 450
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454
ASYLQ+A+L +GME E+Q+ALKEG+ LEAK N
Sbjct: 451 ASYLQSASLGILGMEKESQIALKEGSNLEAKMN 483
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 460 | ||||||
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.982 | 0.924 | 0.852 | 2.1e-212 | |
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.982 | 0.928 | 0.827 | 2.8e-208 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.982 | 0.928 | 0.798 | 2.8e-201 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.978 | 0.920 | 0.769 | 2.2e-192 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.973 | 0.914 | 0.746 | 1.4e-183 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.980 | 0.933 | 0.740 | 1.3e-180 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.971 | 0.873 | 0.653 | 5e-163 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.986 | 0.928 | 0.606 | 7.4e-153 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.965 | 0.930 | 0.626 | 7.9e-149 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.960 | 0.885 | 0.603 | 1.7e-144 |
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2053 (727.8 bits), Expect = 2.1e-212, P = 2.1e-212
Identities = 386/453 (85%), Positives = 422/453 (93%)
Query: 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
SE+ +P+FRE+TLEQLK ATSGFAVE IVSEHGEKAPNVVYKGKLENQ++IAVKRF RM
Sbjct: 32 SEITDVPNFREYTLEQLKAATSGFAVEYIVSEHGEKAPNVVYKGKLENQKKIAVKRFTRM 91
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
AWPD RQFLEEARSVGQLR+ R+ NLLGCCCEGDERLLVAE+MPNETLAKHLFHWET PM
Sbjct: 92 AWPDSRQFLEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHWETQPM 151
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
KW MRLRVVL+LAQALEYCTSKGR LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSY
Sbjct: 152 KWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSY 211
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLAFTPPEYLRTGR+TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ LTDSC
Sbjct: 212 STNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQTLTDSC 271
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
L+GQF+D DGTELVRLASRCLQYE RERPN KSLVTAL+PLQKETEV SHVLMG+PHS S
Sbjct: 272 LDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGLPHSGS 331
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
VSPLSPLGEACSRRDLTA+ EILEK+ YKDDEGV NELSF MWTDQMQE+LNSKKKGDVA
Sbjct: 332 VSPLSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKKKGDVA 391
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FRQKD ++AIECYTQFID G M+SPTV ARRSLCYLMSDMP++AL+DA+QAQ+ISP+WH+
Sbjct: 392 FRQKDFREAIECYTQFIDGG-MISPTVCARRSLCYLMSDMPKEALDDAIQAQVISPVWHV 450
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454
ASYLQ+A+L +GME E+Q+ALKEG+ LEAK N
Sbjct: 451 ASYLQSASLGILGMEKESQIALKEGSNLEAKMN 483
|
|
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2014 (714.0 bits), Expect = 2.8e-208, P = 2.8e-208
Identities = 374/452 (82%), Positives = 414/452 (91%)
Query: 3 EVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMA 62
E + LP FREF++E L+NATSGFA ENIVSEHGEKAPNVVYKGKL+NQRRIAVKRFNR A
Sbjct: 34 EGNDLPQFREFSIETLRNATSGFATENIVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKA 93
Query: 63 WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMK 122
WPD RQFLEEA++VGQLRN R+ NLLGCC EG+ERLLVAE+MPNETLAKHLFHWE+ PMK
Sbjct: 94 WPDSRQFLEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAKHLFHWESQPMK 153
Query: 123 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182
WAMRLRV LH+AQALEYCT KGRALYHDLNAYR+LFD+D NPRLS FGLMKNSRDGKSYS
Sbjct: 154 WAMRLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYS 213
Query: 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 242
TNLAFTPPEYLRTGRVTPESV+YS+GTLLLDLLSGKHIPPSHALDLIRDRN+QML DSCL
Sbjct: 214 TNLAFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCL 273
Query: 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASV 302
EGQF+ DDGTEL+RLASRCLQYEPRERPNPKSLVTA+ PLQK+ E PSH LMGIP SAS
Sbjct: 274 EGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPSHQLMGIPSSAST 333
Query: 303 SPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAF 362
+PLSPLGEAC R DLTAIHEILEK+SYKDDEG A ELSFQMWT+QMQ++LN KKKGDVAF
Sbjct: 334 TPLSPLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDSLNFKKKGDVAF 393
Query: 363 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 422
R K+ +AI+CY+QFI+ GTMVSPTVYARRSLCYLM++MPQ+ALNDAMQAQ+ISP WHIA
Sbjct: 394 RHKEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQAQVISPAWHIA 453
Query: 423 SYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454
SYLQA ALSA+G ENEA ALK+G+ LE+K+N
Sbjct: 454 SYLQAVALSALGQENEAHAALKDGSMLESKRN 485
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1948 (690.8 bits), Expect = 2.8e-201, P = 2.8e-201
Identities = 361/452 (79%), Positives = 407/452 (90%)
Query: 3 EVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMA 62
E + LP FREF++E ++NATSGFA ENIVSEHGE+APNVVYKGKLENQRRIAVKRFNR +
Sbjct: 34 ESNDLPQFREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLENQRRIAVKRFNRKS 93
Query: 63 WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMK 122
WPD RQFLEEA++VGQLRN+R+ NLLGCC E +ERLL+AE+MPNETLAKHLFHWE+ PMK
Sbjct: 94 WPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMK 153
Query: 123 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182
WAMRLRV LH+AQALEYCTSKGRALYHDLNAYR+LFD+D NPRLS FGLMKNSRDGKSYS
Sbjct: 154 WAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYS 213
Query: 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 242
TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN+QML DS L
Sbjct: 214 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGL 273
Query: 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASV 302
EGQF+ DDGTEL+RLASRCLQYEPRERPNPKSLV+A+ PLQK+ E+ SH L+G+P+SA+
Sbjct: 274 EGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATT 333
Query: 303 SPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAF 362
+ LSPLGEAC R DLTAIHEI+EK+ YKDDEG ELSFQMWTDQMQ+TL KKKGD AF
Sbjct: 334 TALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAF 393
Query: 363 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 422
R KD AIECY+QFI+ GTM SPTV+AR+SLCYLM+DMP++ALN+AMQAQ+ISP WHIA
Sbjct: 394 RHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVISPAWHIA 453
Query: 423 SYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454
SYLQA ALSA+G ENEA ALK+G LE+K+N
Sbjct: 454 SYLQAVALSALGQENEAHTALKDGAMLESKRN 485
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1864 (661.2 bits), Expect = 2.2e-192, P = 2.2e-192
Identities = 351/456 (76%), Positives = 404/456 (88%)
Query: 5 DGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP 64
D LPSF EF+ +QL+ AT GF+ ++IVSEHG KAPNVVYKG+LE+ R IAVKRFNR AWP
Sbjct: 32 DDLPSFTEFSFDQLRAATCGFSTDSIVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWP 91
Query: 65 DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWA 124
D RQFLEEA++VGQLRN RL NL+G CCEGDERLLVAE+MP ETL+KHLFHW++ PMKW+
Sbjct: 92 DTRQFLEEAKAVGQLRNERLANLIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWS 151
Query: 125 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 184
MRLRV L+LAQALEYC+SKGRALYHDLNAYRILFD+DGNPRLS FGLMKNSRDGKSYSTN
Sbjct: 152 MRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN 211
Query: 185 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244
LAFTPPEYLRTGRV PESV+YSFGTLLLDLLSGKHIPPSHALDLIR +N ML DSCL+G
Sbjct: 212 LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDG 271
Query: 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSP 304
F++DDGT+LVRLASRCLQYE RERPN KSLV++L+PLQKET++PSHVLMGIPH A+ SP
Sbjct: 272 HFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETDIPSHVLMGIPHGAA-SP 330
Query: 305 -----LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGD 359
L+PLG+ACSR DLTAIHEILEK+ YKDDEGVANELSFQ+WTDQ+QETLNSKK+GD
Sbjct: 331 KETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWTDQIQETLNSKKQGD 390
Query: 360 VAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW 419
AF+ KD A+ECYTQFI+ GTMVSPTV+ARR LCYLMS+MPQ+AL DAMQAQ++SP W
Sbjct: 391 AAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEW 450
Query: 420 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 455
A YLQAAAL ++GM+ +A LK+GT+LEAKK++
Sbjct: 451 PTAFYLQAAALFSLGMDKDACETLKDGTSLEAKKHN 486
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| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1781 (632.0 bits), Expect = 1.4e-183, P = 1.4e-183
Identities = 338/453 (74%), Positives = 394/453 (86%)
Query: 8 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPR 67
P+F+EF LEQLK+AT GF+ +NIVSEHGEKAPNVVY+G+L++ R IAVKRFNR+AW D R
Sbjct: 36 PTFKEFKLEQLKSATGGFSSDNIVSEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHR 95
Query: 68 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 127
QFL+EA++VG LR++RL NL+GCC EG+ERLLVAE+MP+ETLAKHLFHWE +PMKWAMRL
Sbjct: 96 QFLDEAKAVGSLRSDRLANLIGCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRL 155
Query: 128 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 187
RV L LAQALEYC++KGRALYHDLNAYR+LFD+DGNPRLS FGLMKNSRDGKSYSTNLAF
Sbjct: 156 RVALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAF 215
Query: 188 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247
TPPEYLRTGRVTPESV++SFGT+LLDL+SGKHIPPSHALDLIR +N ML DS LEG F+
Sbjct: 216 TPPEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFS 275
Query: 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASV---SP 304
++DGTELVRLA+RCLQYE RERPN KSLVT+L LQKE++V S+VLMGIPH SP
Sbjct: 276 NEDGTELVRLATRCLQYEARERPNVKSLVTSLVTLQKESDVASYVLMGIPHETEAEEESP 335
Query: 305 LS--PLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAF 362
LS P G+AC R DLTAI EIL KI YKDDEG+ANELSFQMWT+QMQE+LNSKK+GD+AF
Sbjct: 336 LSLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAF 395
Query: 363 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 422
R KD A++CYTQFID GTMVSPTV+ARR L YLM+D Q+AL DA+QAQ++SP W A
Sbjct: 396 RSKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTA 455
Query: 423 SYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 455
YLQAA L +GME +AQ ALK+GTTLEAKK++
Sbjct: 456 LYLQAACLFKLGMEADAQQALKDGTTLEAKKSN 488
|
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| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1753 (622.1 bits), Expect = 1.3e-180, P = 1.3e-180
Identities = 339/458 (74%), Positives = 393/458 (85%)
Query: 3 EVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMA 62
EV+G+ SFRE++LEQLK ATS FA+EN+VSEHGE APNVVY+GKLEN +IA+KRF+ A
Sbjct: 31 EVNGVHSFREYSLEQLKIATSCFALENVVSEHGETAPNVVYQGKLENHMKIAIKRFSGTA 90
Query: 63 WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMK 122
WPDPRQFLEEAR VGQLR+ R+ NLLG CCEG ERLLVAE+MPNETLAKHLFHW+T PMK
Sbjct: 91 WPDPRQFLEEARLVGQLRSKRMANLLGYCCEGGERLLVAEFMPNETLAKHLFHWDTEPMK 150
Query: 123 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182
WAMRLRV L++++ALEYC++ G LYHDLNAYR+LFDE+ NPRLSTFGLMKNSRDGKSYS
Sbjct: 151 WAMRLRVALYISEALEYCSNNGHTLYHDLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYS 210
Query: 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 242
TNLAFTPPEYLRTGR+T ESVIYSFGTLLLDLL+GKHIPPSHALDLIRDRNLQ LTDSCL
Sbjct: 211 TNLAFTPPEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCL 270
Query: 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS- 301
EGQF+D DGTELVRL S CLQYE RERPN KSLVTAL LQK+TEV SHVLMG+P S +
Sbjct: 271 EGQFSDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGLPQSGTF 330
Query: 302 VSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361
SP SP EACS +DLT++ EILEKI YKDDE +LSF MWT+QMQE +NSKKKGD+A
Sbjct: 331 ASPPSPFAEACSGKDLTSMVEILEKIGYKDDE----DLSF-MWTEQMQEAINSKKKGDIA 385
Query: 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421
FR+KD +AIE YTQF+D G M+S TV RRS YLMS+M ++AL+DAM+AQ ISP+W++
Sbjct: 386 FRRKDFSEAIEFYTQFLDLG-MISATVLVRRSQSYLMSNMAKEALDDAMKAQGISPVWYV 444
Query: 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQ 459
A YLQ+AALS +GME E+Q+AL EG+ LEA+K S + Q
Sbjct: 445 ALYLQSAALSVLGMEKESQIALTEGSILEARKISASTQ 482
|
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| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1587 (563.7 bits), Expect = 5.0e-163, P = 5.0e-163
Identities = 296/453 (65%), Positives = 366/453 (80%)
Query: 6 GLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD 65
G+PSF EF+ LK AT+ F+ +NIVSE GEKAPN+VYKG+L+N+R IAVK+F +MAWP+
Sbjct: 54 GIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPE 113
Query: 66 PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAM 125
P+QF EEA VG+LR+NRL NL+G CC+GDERLLVAE+MPN+TLAKHLFHWE ++WAM
Sbjct: 114 PKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAM 173
Query: 126 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 185
RLRV ++A+AL+YC+++GR LYHDLNAYR+LFDEDG+PRLS FGLMKNSRDGKSYSTNL
Sbjct: 174 RLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNL 233
Query: 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245
A+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +N+ +L DS LEG+
Sbjct: 234 AYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGK 293
Query: 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH-----SA 300
F+ ++ T +V LAS+CLQYEPRERPN K LV L+PLQ +++VPS+V++GI S
Sbjct: 294 FSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPST 353
Query: 301 SVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDV 360
PLSPLGEACSR DLTAIH+IL Y+DDEG NELSFQ WT QM++ L+++K+GD
Sbjct: 354 PQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKRGDQ 412
Query: 361 AFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 420
+FR+KD K AI+CY+QFID GTMVSPTV+ RRSLCYL+ D P AL DAMQAQ + P W
Sbjct: 413 SFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWP 472
Query: 421 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453
A Y+Q+ AL+ + M +A L E LE K+
Sbjct: 473 TAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
|
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| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
Identities = 277/457 (60%), Positives = 359/457 (78%)
Query: 3 EVDG-LPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM 61
+VD + +F+EF L +L+ AT+GF+ IVSE GEKAPNVVY+GKLE +A+KRF+R
Sbjct: 30 QVDQEIQNFKEFELNELRKATNGFSPSCIVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQ 89
Query: 62 AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
+WPD +QF+ EA VG+LRN R+ +L+GCC EGDERLLVAEYMPN+TL+KHLFHWE P+
Sbjct: 90 SWPDAQQFVVEATGVGKLRNKRIVSLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPL 149
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
W MR+R+ ++A+AL+YC + R +YHDLNAYRILFDE+G+PRLSTFGLMKNSRDGKSY
Sbjct: 150 PWDMRVRIADYIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSY 209
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
STNLA+TPPE+LRTGRV PESVI+S+GT+LLDLLSGKHIPPSHALD+IR +N +L DS
Sbjct: 210 STNLAYTPPEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPSHALDIIRGKNALLLMDSS 269
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSAS 301
LEGQ+ +DD T+LV LAS+CLQ E ++RP+ K L++A++PLQK+ EV SHVLMG+P +
Sbjct: 270 LEGQYANDDATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQEEVASHVLMGLPKNTV 329
Query: 302 VSP--LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGD 359
+ P LSPLG+AC++ DL H+IL K Y+D+EG NELSFQ WT Q+QE LN+KK GD
Sbjct: 330 ILPTMLSPLGKACAKMDLATFHDILLKTGYRDEEGAENELSFQEWTQQVQEMLNTKKFGD 389
Query: 360 VAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW 419
+AFR KD K++IE Y++ + + S TV+ARR+ YLM+D + AL DAMQAQ+ P W
Sbjct: 390 IAFRDKDFKNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQQELALRDAMQAQVCIPEW 449
Query: 420 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 456
A YLQA ALS +GME +AQ L +G +AK+ ++
Sbjct: 450 PTAFYLQALALSKLGMETDAQDMLNDGAAYDAKRQNS 486
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| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1453 (516.5 bits), Expect = 7.9e-149, P = 7.9e-149
Identities = 284/453 (62%), Positives = 346/453 (76%)
Query: 8 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPR 67
P+F EF+LEQL+ AT GF+ +NIVSEH E+ PN+VYKG+L + R+IAVKRF R++WPD
Sbjct: 24 PNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIAVKRFQRLSWPDSL 83
Query: 68 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 127
+F+EEA++VG+ R+ + NL+GCC EG ERLLVAEYMPNETLAKHLFHWE PMKW MRL
Sbjct: 84 EFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHWEKRPMKWEMRL 143
Query: 128 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 187
RV LH A ALEYC G LYHDLN YRILFD+ GNPRLS FGLMK SR+GKSYSTNLAF
Sbjct: 144 RVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSREGKSYSTNLAF 203
Query: 188 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247
PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+HALDL R +N +L DS L+GQF+
Sbjct: 204 APPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFS 263
Query: 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV-PSHVLMGIPHSASVSP-- 304
D+D TEL+ LASRCL+ EP ERP+ K L++ALS L+K E+ P+ IP + P
Sbjct: 264 DEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEENIPTPSYTEPAT 323
Query: 305 -----LSPLGEACSRRDLTAIHEILEKISY-KDDEGVANELSFQMWTDQMQETLNSKKKG 358
L+P GEAC R DL+ +HE+LEK+ Y +DD V NE SFQMWT QMQE ++ KK G
Sbjct: 324 KEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTGQMQENMDYKKHG 383
Query: 359 DVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI 418
D AFR KD + AIE YT+F+ +VSPTV ARR LCYLMSDM ++AL+DAMQ Q+ SP
Sbjct: 384 DAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREALSDAMQTQVASPE 443
Query: 419 WHIASYLQAAALSAMGMENEAQVALKEGTTLEA 451
+ IA YLQAA L +GME EA+ AL+ G++LEA
Sbjct: 444 FSIALYLQAACLLKLGMEAEAKEALRHGSSLEA 476
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| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1412 (502.1 bits), Expect = 1.7e-144, P = 1.7e-144
Identities = 274/454 (60%), Positives = 339/454 (74%)
Query: 10 FREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQF 69
FREF+LEQL+ AT GF+ NIVSEH + PN+VYKGKL + RRIAVKRF R++WPDP +F
Sbjct: 45 FREFSLEQLRIATDGFSAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPFEF 104
Query: 70 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 129
+ EA++VG+LR+ + NL+GCCC+ +ERLLVAEYMPN TLAKHLFHWE PMKW MRL+V
Sbjct: 105 INEAQAVGRLRSEHMANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKV 164
Query: 130 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP 189
LH A+ALEYC KG LYHDLN YRI+FD+ G P+LS FGLMKNS +GK YSTNLAF P
Sbjct: 165 ALHTARALEYCNDKGIDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAP 224
Query: 190 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249
PEYLR G V ESV +SFGTLLLDL+SG+HIPP+HALDL R +N +L DS L+GQF+D+
Sbjct: 225 PEYLRLGTVIAESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDE 284
Query: 250 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV-PSHVLMGI-PHSASV----S 303
D TEL+ +ASRC + EP ERP+ K L LS LQK ++ P +V + P S ++
Sbjct: 285 DRTELIHVASRCFKTEPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPPSKNLPEKTK 344
Query: 304 P------LSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKK 357
P L+P G+ACSR DL++IHE+LEK+ Y++D GV NE SFQMWT +MQE ++ KK
Sbjct: 345 PATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEMQENMDYKKH 404
Query: 358 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 417
GD AF KD AIE YT+F+ VSPTV ARR LCYLM++M +AL+DAMQAQ+ SP
Sbjct: 405 GDAAFLAKDFDTAIEFYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSDAMQAQVASP 464
Query: 418 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 451
W I YLQAA L + ME EA+ AL+ G+ LEA
Sbjct: 465 EWPIPLYLQAACLFKLEMEAEAKEALRHGSALEA 498
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FHD7 | Y5126_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7986 | 0.9826 | 0.9281 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00026835001 | SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (491 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 460 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-29 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 5e-23 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-22 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 5e-22 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-21 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 3e-21 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-19 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-19 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 5e-17 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 8e-16 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-15 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-14 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 1e-14 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 4e-14 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-13 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 5e-12 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 7e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 9e-12 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 2e-11 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 2e-11 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 3e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-11 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-11 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 5e-11 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 6e-11 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 7e-11 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 8e-11 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 8e-11 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-10 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 4e-10 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-10 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-09 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 1e-09 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 1e-09 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-09 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 2e-09 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 3e-09 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 3e-09 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 7e-09 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 8e-09 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 1e-08 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-08 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 2e-08 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-08 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 4e-08 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-08 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 6e-08 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 8e-08 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 1e-07 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 2e-07 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 2e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-07 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 3e-07 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 5e-07 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-07 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 6e-07 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 6e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 6e-07 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 6e-07 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 7e-07 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 8e-07 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-06 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-06 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-06 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 3e-06 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 3e-06 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-06 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 3e-06 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 3e-06 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 4e-06 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 4e-06 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 4e-06 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 8e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 1e-05 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-05 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 1e-05 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 1e-05 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-05 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 1e-05 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 1e-05 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 1e-05 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-05 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 2e-05 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 2e-05 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 2e-05 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-05 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 2e-05 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 3e-05 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 3e-05 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 4e-05 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-05 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 5e-05 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 5e-05 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 5e-05 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 6e-05 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 6e-05 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 7e-05 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 7e-05 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 8e-05 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 1e-04 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 1e-04 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 2e-04 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-04 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 2e-04 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 3e-04 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 3e-04 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 3e-04 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 4e-04 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 4e-04 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 4e-04 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 7e-04 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 7e-04 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 8e-04 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.001 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 0.001 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.001 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 0.001 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 0.001 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 0.001 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 0.002 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 0.002 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 0.003 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 0.003 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 0.003 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 0.003 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 0.003 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 0.003 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 0.004 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 0.004 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 5e-29
Identities = 60/245 (24%), Positives = 95/245 (38%), Gaps = 49/245 (20%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
VY + + +++A+K + + L E + +L + + L G + +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 157
LV EY +L L E + LR++L + + LEY S G + H DL IL
Sbjct: 68 LVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124
Query: 158 FDED-GNPRLSTFGLMKNSRDGKSYST----NLAFTPPEYLR-TGRVTPESVIYSFGTLL 211
D D G +L+ FGL K KS A+ PE L G + +S I+S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 212 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 271
+L DLIR + LQ +P +RP+
Sbjct: 185 YEL--------PELKDLIR-----------------------------KMLQKDPEKRPS 207
Query: 272 PKSLV 276
K ++
Sbjct: 208 AKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 97.6 bits (244), Expect = 5e-23
Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 28/256 (10%)
Query: 41 VVYKGKL-----ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 94
VYKG L + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 153
+ ++V EYMP L +L + + L L +A+ +EY SK H DL A
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN--FIHRDLAA 131
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFG 208
L E+ ++S FGL ++ D Y + PE L+ G+ T +S ++SFG
Sbjct: 132 RNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFG 191
Query: 209 TLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263
LL ++ + G+ + + L+ ++ +C EL +L +C
Sbjct: 192 VLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPP---------ELYKLMLQCWA 242
Query: 264 YEPRERPNPKSLVTAL 279
+P +RP LV L
Sbjct: 243 EDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 95.3 bits (238), Expect = 3e-22
Identities = 70/256 (27%), Positives = 110/256 (42%), Gaps = 29/256 (11%)
Query: 41 VVYKGKLE-----NQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 94
VYKGKL+ + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 153
+ +V EYM L +L + + L L +A+ +EY SK H DL A
Sbjct: 74 EPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSFALQIARGMEYLESKN--FIHRDLAA 130
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFG 208
L E+ ++S FGL ++ D Y + PE L+ G+ T +S ++SFG
Sbjct: 131 RNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFG 190
Query: 209 TLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263
LL ++ + G+ + L+ +++ +C EL L +C
Sbjct: 191 VLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPP---------ELYDLMLQCWA 241
Query: 264 YEPRERPNPKSLVTAL 279
+P +RP LV L
Sbjct: 242 EDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 5e-22
Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 20/249 (8%)
Query: 41 VVYKGKLEN-QRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97
VYK K + + +AVK + E R + +L + + L+ + D
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73
Query: 98 LLVAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 155
LV EY L +L P+ ++ L + + LEY S G + H DL
Sbjct: 74 YLVMEYCEGGDLFDYL---SRGGPLSEDEAKKIALQILRGLEYLHSNG--IIHRDLKPEN 128
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGR-VTPESVIYSFGTL 210
IL DE+G +++ FGL K S T TP PE L G P+ ++S G +
Sbjct: 129 ILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVI 188
Query: 211 LLDLLSGKHI-PPSHALDLIR--DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267
L +LL+GK + LD ++ R L + + E L +CL +P
Sbjct: 189 LYELLTGKPPFSGENILDQLQLIRRILGPPLEF--DEPKWSSGSEEAKDLIKKCLNKDPS 246
Query: 268 ERPNPKSLV 276
+RP + ++
Sbjct: 247 KRPTAEEIL 255
|
Length = 260 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 2e-21
Identities = 73/258 (28%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 41 VVYKGKL-----ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 94
VYKG L + ++AVK A + R+ FLEEA + +L + + LLG C +G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 153
+ +V EYMP L L + L++ L +A+ +EY SK H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAA 130
Query: 154 YRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNLAFTP-----PEYLRTGRVTPESVIYSF 207
L E+ ++S FGL ++ D P PE L+ G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 208 GTLLLDLLSG-----KHIPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRC 261
G LL ++ + + L+L+ D ++ ++C + EL L +C
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGY-RLPRPENCPD---------ELYELMLQC 240
Query: 262 LQYEPRERPNPKSLVTAL 279
Y+P +RP LV L
Sbjct: 241 WAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 92.6 bits (231), Expect = 3e-21
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 33/262 (12%)
Query: 41 VVYKGKL----ENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGD 95
VYKGKL +AVK A + R FL+EAR + +L + + LLG C E +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 96 ERLLVAEYMPNETLAKHL-------FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 148
LV EYM L +L E + L + +A+ +EY SK + ++
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVH 128
Query: 149 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPES 202
DL A L ED ++S FGL ++ D Y + + PE L+ G T +S
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188
Query: 203 VIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257
++SFG LL ++ + G + L+ +R + C + EL L
Sbjct: 189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD---------ELYEL 239
Query: 258 ASRCLQYEPRERPNPKSLVTAL 279
C Q +P +RP LV L
Sbjct: 240 MLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 87.2 bits (217), Expect = 2e-19
Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 26/248 (10%)
Query: 41 VVYKGK-LENQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
VY + + + +A+K + D + L E + + +L++ + L + D+
Sbjct: 14 KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL---NAYR 155
LV EY L L A + + ALEY SKG ++ DL N
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYLHSKGI-VHRDLKPEN--- 127
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLL 212
IL DEDG+ +L+ FGL + G+ +T + PE L I+S G +L
Sbjct: 128 ILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILY 187
Query: 213 DLLSGK-----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267
+LL+GK I + +L+R + L +P
Sbjct: 188 ELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD----ISPEAKDLIR---KLLVKDPE 240
Query: 268 ERPNPKSL 275
+R +
Sbjct: 241 KRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 3e-19
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
VYKG L+ +AVK R P R+FL+EA + Q + + L+G C + +
Sbjct: 11 VYKGVLKGNTEVAVKTC-RSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYI 69
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159
V E +P +L L + + + L++ L A +EY SK ++ DL A L
Sbjct: 70 VMELVPGGSLLTFL-RKKKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVG 127
Query: 160 EDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLL 212
E+ ++S FG M +G Y+ + + +T PE L GR T ES ++S+G LL
Sbjct: 128 ENNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLW 186
Query: 213 DLLSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEP 266
+ S P + I + +M C E E+ RL +C Y+P
Sbjct: 187 ETFSLGDTPYPGMSNQQTRERI-ESGYRMPAPQLCPE---------EIYRLMLQCWAYDP 236
Query: 267 RERP 270
RP
Sbjct: 237 ENRP 240
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 5e-17
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 16/244 (6%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V G Q+ +AVK + + FL EA + LR+ L LLG +G+ +V
Sbjct: 22 VMLGDYRGQK-VAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
EYM +L +L + A +L L + + +EY K ++ DL A +L ED
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSED 138
Query: 162 GNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 220
++S FGL K + G S + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 221 P-PSHALDLIRDR---NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
P P L + +M EG E+ ++ C + +P +RP K L
Sbjct: 199 PYPRIPLKDVVPHVEKGYRM---EAPEGC-----PPEVYKVMKDCWELDPAKRPTFKQLR 250
Query: 277 TALS 280
L+
Sbjct: 251 EQLA 254
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 78.6 bits (192), Expect = 8e-16
Identities = 75/365 (20%), Positives = 127/365 (34%), Gaps = 35/365 (9%)
Query: 29 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLR-NNRL 84
I+ + GE + VY + +++ +A+K + +FL E + + L +
Sbjct: 3 RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60
Query: 85 TNLLGCCCEGDERLLVAEYMPNETLAKHL-FHWETHPMKWAMRLRVVLHLAQALEYCTSK 143
L + LV EY+ +L L P+ + L ++ + ALEY SK
Sbjct: 61 VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120
Query: 144 GRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDGKSYSTN----------LAFTPPEY 192
G ++ D+ IL D DG +L FGL K D S S+ + PE
Sbjct: 121 G-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179
Query: 193 LR---TGRVTPESVIYSFGTLLLDLLSGKH--------IPPSHALDLIRDRNLQMLTDSC 241
L + S I+S G L +LL+G S L +I + L
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA--LSPLQKETEVPSHVLMGIPHS 299
+ L + L +P+ R + S ++ L+ L+ + S +L +
Sbjct: 240 SP-SNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSA 298
Query: 300 ASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANELSFQMWTDQMQETLNSKKKGD 359
L P EA I DD + EL+ + + +
Sbjct: 299 PLRLSLPPSLEALISS--LNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTA 356
Query: 360 VAFRQ 364
+ R
Sbjct: 357 SSKRS 361
|
Length = 384 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 75.1 bits (184), Expect = 3e-15
Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 14/238 (5%)
Query: 42 VYKGKLE-NQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
V+ G+L + +AVK PD + +FL+EAR + Q + + L+G C + +
Sbjct: 11 VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159
V E + L E +K +++V + A +EY SK ++ DL A L
Sbjct: 71 VMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVT 128
Query: 160 EDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLD 213
E ++S FG+ + DG ST + +T PE L GR + ES ++SFG LL +
Sbjct: 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188
Query: 214 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 271
S +P ++ + ++ + + + + + RL RC +Y+P +RP+
Sbjct: 189 AFSLGAVPYAN----LSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPS 242
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 1e-14
Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 21/251 (8%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
V+KG L+++ +AVK + + +FL EAR + Q + + L+G C + +V
Sbjct: 11 VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV 70
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
E +P L + +K ++ L A + Y SK ++ DL A L E
Sbjct: 71 MELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGE 128
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
+ ++S FG+ + DG S+ L +T PE L GR + ES ++S+G LL +
Sbjct: 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188
Query: 216 SGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 274
S P P R++ + SC Q DD + ++ RC Y+P RP
Sbjct: 189 SLGVCPYPGMTNQQAREQVEKGYRMSC--PQKCPDD---VYKVMQRCWDYKPENRPK--- 240
Query: 275 LVTALSPLQKE 285
S LQKE
Sbjct: 241 ----FSELQKE 247
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 1e-14
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 35 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
GE V +G+ Q+ +AVK N + FLEE + +L + L LLG
Sbjct: 15 GEGEFGAVLQGEYTGQK-VAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH- 70
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154
+ +V E M L L + L+ L +A+ +EY SK + ++ DL A
Sbjct: 71 NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAAR 129
Query: 155 RILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLD 213
IL EDG ++S FGL + S + + +T PE L+ + + +S ++S+G LL +
Sbjct: 130 NILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189
Query: 214 LLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE----LVRLASRCLQYEPRE 268
+ S G+ P +L +++ C+E + + + L + C + EP++
Sbjct: 190 VFSYGRAPYPKMSLKEVKE---------CVEKGYRMEPPEGCPADVYVLMTSCWETEPKK 240
Query: 269 RPNPKSLVTALSPLQKE 285
RP+ L L+KE
Sbjct: 241 RPSFHKLR---EKLEKE 254
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 4e-14
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 26/261 (9%)
Query: 31 VSEHGEKAPNVVYKGKLENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLL 88
+ E G VV+ GK + +A+K M+ D F+EEA+ + +L + L L
Sbjct: 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDD---FIEEAKVMMKLSHPNLVQLY 65
Query: 89 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRA 146
G C + +V EYM N L +L K L + + +A+EY S G
Sbjct: 66 GVCTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLLDMCSDVCEAMEYLESNG-F 121
Query: 147 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPE 201
++ DL A L ED ++S FGL + D + S+ + + PPE R + +
Sbjct: 122 IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSK 181
Query: 202 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD---GTELVRLA 258
S ++SFG L+ ++ S +P R N +++ +S G TE+ +
Sbjct: 182 SDVWSFGVLMWEVFSEGKMPYE------RFSNSEVV-ESVSAGYRLYRPKLAPTEVYTIM 234
Query: 259 SRCLQYEPRERPNPKSLVTAL 279
C +P +RP K L++ L
Sbjct: 235 YSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 4e-13
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 26/241 (10%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ G ++A+K + + P FL EA + QL++ RL L + + ++
Sbjct: 22 VWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQ-EPIYIIT 79
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
EYM N +L L E + + + +A+ + + K ++ DL A IL E
Sbjct: 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSET 138
Query: 162 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 139 LCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTEI 196
Query: 215 LSGKHIP-PSHA-LDLIR--DRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
++ IP P ++I+ +R +M D+C E EL L C + +P ER
Sbjct: 197 VTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPE---------ELYELMRLCWKEKPEER 247
Query: 270 P 270
P
Sbjct: 248 P 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 5e-12
Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 39/266 (14%)
Query: 42 VYKGKLENQR-----RIAVKRFNRMAWPDPRQFLEEARSVGQLRN---NRLTNLLGCCCE 93
V + + ++AVK N R E R + LR + G C +
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEK 77
Query: 94 GDER--LLVAEYMPNETLAKHL-FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHD 150
R L+ EY+P+ +L +L H + +K L + + ++Y S+ R ++ D
Sbjct: 78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQICKGMDYLGSQ-RYIHRD 134
Query: 151 LNAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFTP-----PEYLRTGRVTPESV 203
L A IL + + ++S FGL K Y +P PE LRT + + S
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194
Query: 204 IYSFGTLLLDLLS-GKH--IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR---- 256
++SFG L +L + G PP+ L +I QM+ LE +G L R
Sbjct: 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE---LLKEGERLPRPPSC 251
Query: 257 ------LASRCLQYEPRERPNPKSLV 276
L C + EP++RP+ L+
Sbjct: 252 PDEVYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 7e-12
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 21/223 (9%)
Query: 69 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL-FHWETHPMKWAMRL 127
F E A + QL + L G C GDE ++V EY+ +L +L + + W +L
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103
Query: 128 RVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--- 183
V LA AL + KG L H ++ A +L + + + +K S G S +
Sbjct: 104 EVAKQLAWALHFLEDKG--LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161
Query: 184 -----NLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 237
+ + PPE + + ++ + +SFGT L ++ SG P S ALD + LQ
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD--SQKKLQFY 218
Query: 238 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280
D Q TEL L ++C+ YEP RP+ ++++ L+
Sbjct: 219 ED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 9e-12
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 10/181 (5%)
Query: 43 YKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LVA 101
Y+G ++AVK A + FL EA + QLR++ L LLG E L +V
Sbjct: 27 YRGN-----KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
EYM +L +L + L+ L + +A+EY + ++ DL A +L ED
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSED 138
Query: 162 GNPRLSTFGLMKNSRDGKSYST-NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 220
++S FGL K + + + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 221 P 221
P
Sbjct: 199 P 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-11
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VV GK Q +A+K + + +F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
EYM N L +L + L + + + + Y SK + ++ DL A L D+
Sbjct: 78 TEYMSNGCLLNYLREHGKRFQP-SQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDD 135
Query: 161 DGNPRLSTFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
G ++S FGL + D + S+ + ++PPE L + + +S +++FG L+ ++
Sbjct: 136 QGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVY 195
Query: 216 SGKHIP 221
S +P
Sbjct: 196 SLGKMP 201
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 2e-11
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 31 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGC 90
V E G +V+ G +R++A+K R F+EEA+ + +L + +L L G
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTI-REGAMSEEDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 91 CCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALY 148
C E LV E+M + L+ +L K++ L + L + + + Y S ++
Sbjct: 68 CTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLLGMCLDVCEGMAYLESSN-VIH 123
Query: 149 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESV 203
DL A L E+ ++S FG+ + D + S+ + ++ PE + + +S
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183
Query: 204 IYSFGTLLLDLLSGKHIP 221
++SFG L+ ++ S P
Sbjct: 184 VWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 3e-11
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 32/255 (12%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VV+ GK Q ++A+K N A + F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVHLGKWRAQIKVAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
E+M N L +L + K M L + + + +EY ++ DL A L
Sbjct: 78 TEFMENGCLLNYLRQRQGKLSK-DMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSS 135
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
G ++S FG+ + D + S++ A ++PPE + + +S ++SFG L+ ++
Sbjct: 136 TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195
Query: 216 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR--LAS--------RCLQYE 265
+ +P + N +++ G L R LAS C +
Sbjct: 196 TEGKMP------FEKKSNYEVVEMI--------SRGFRLYRPKLASMTVYEVMYSCWHEK 241
Query: 266 PRERPNPKSLVTALS 280
P RP L+ A++
Sbjct: 242 PEGRPTFAELLRAIT 256
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 3e-11
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 24/247 (9%)
Query: 53 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETL 109
+AVK R + +E + L + + GCC E + L+ EY+P +L
Sbjct: 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95
Query: 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 169
+L H + A L + + + Y S+ ++ DL A +L D D ++ F
Sbjct: 96 RDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDF 151
Query: 170 GLMKNSRDGKSY-------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKH 219
GL K +G Y + + + E L+ + + S ++SFG L +LL+ K
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211
Query: 220 IPPSHALDLIRDRNLQM----LTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNP 272
PP ++I + QM L + G + E+ L C + E + RP
Sbjct: 212 SPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF 271
Query: 273 KSLVTAL 279
+SL+ L
Sbjct: 272 RSLIPIL 278
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 3e-11
Identities = 52/245 (21%), Positives = 96/245 (39%), Gaps = 21/245 (8%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
VYK + + +A+K + + + E + + + ++ + G + DE +
Sbjct: 15 EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74
Query: 100 VAEYMPNETLAKHL-FHWETHPMKW-AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 157
V E+ +L L +T A + +L + LEY S G ++ D+ A IL
Sbjct: 75 VMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELL---KGLEYLHSNGI-IHRDIKAANIL 130
Query: 158 FDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
DG +L FGL + +++ + + PE + ++ I+S G ++L
Sbjct: 131 LTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIEL 190
Query: 215 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG----TELVRLASRCLQYEPRERP 270
GK PP +L + L + G + E +CLQ P +RP
Sbjct: 191 AEGK--PPYS--ELPPMKALFKIAT---NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRP 243
Query: 271 NPKSL 275
+ L
Sbjct: 244 TAEQL 248
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.3 bits (152), Expect = 5e-11
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 25/241 (10%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ G ++AVK + P FL+EA+ + +LR+++L L C E + +V
Sbjct: 22 VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
EYM +L L E ++ + + +A+ + Y S+ ++ DL A IL E+
Sbjct: 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGEN 139
Query: 162 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+++ FGL + +R+G + + +T PE GR T +S ++SFG LL ++
Sbjct: 140 LVCKIADFGLARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEI 197
Query: 215 LSGKHIP-PS-HALDLIR--DRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
++ +P P +++ +R +M +C E EL L +C +P ER
Sbjct: 198 VTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPE---------ELYDLMLQCWDKDPEER 248
Query: 270 P 270
P
Sbjct: 249 P 249
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 6e-11
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 21/249 (8%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V++G +N+ R+A+K + F +E +++ +LR+ L +L C G+ ++
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
E M +L L E + A + + +A+ + Y + +++ DL A IL ED
Sbjct: 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED 140
Query: 162 GNPRLSTFGLMKNSRDG--KSYSTNLAF--TPPEYLRTGRVTPESVIYSFGTLLLDLLSG 217
+++ FGL + ++ S + + T PE G + +S ++SFG LL ++ +
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200
Query: 218 KHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 271
+P D I +M C + E+ ++ C EP +RP+
Sbjct: 201 GQVPYPGMNNHEVYDQI-TAGYRMPCPAKCPQ---------EIYKIMLECWAAEPEDRPS 250
Query: 272 PKSLVTALS 280
K+L L
Sbjct: 251 FKALREELD 259
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 7e-11
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 30 IVSEHGEKAPNVVYKGKLENQRR------IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNN 82
+ E GE A V+ G+ + +AVK A D R+ F EA + ++
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 83 RLTNLLGCCCEGDERLLVAEYMPNETLAKHL------------FHWETHPMKWAMRLRVV 130
+ G C EGD ++V EYM + L K L + + L++
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 131 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 184
+ +A + Y S+ ++ DL L D ++ FG+ SRD Y+T+
Sbjct: 129 VQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182
Query: 185 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK 218
+ + PPE + + T ES ++SFG +L ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 8e-11
Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 52/284 (18%)
Query: 33 EHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLT 85
E GE A VYKG+L + +A+K A P +Q F +EA + L++ +
Sbjct: 12 ELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIV 71
Query: 86 NLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH--------------PMKWAMRLRVVL 131
LLG C + ++ EY+ + L + L H + + L + +
Sbjct: 72 CLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131
Query: 132 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------- 184
+A +EY +S ++ DL A L E ++S FGL SRD YS +
Sbjct: 132 QIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTVKISDFGL---SRDI--YSADYYRVQSK 185
Query: 185 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 235
+ + PPE + G+ T ES I+SFG +L ++ S P +++IR R L
Sbjct: 186 SLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL 245
Query: 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
+ C + L C P RP K + T L
Sbjct: 246 PCPEDC---------PARVYALMIECWNEIPARRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 8e-11
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 18/182 (9%)
Query: 95 DERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
+E+L LV EY P L HL + A + ALEY S G +Y DL
Sbjct: 65 EEKLYLVLEYAPGGELFSHLSKEGRFSEERA--RFYAAEIVLALEYLHSLG-IIYRDLKP 121
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL D DG+ +L+ FGL K S + TP PE L +S G
Sbjct: 122 ENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGV 181
Query: 210 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPR 267
LL ++L+GK PP +A + + + + L+ F + E L S LQ +P
Sbjct: 182 LLYEMLTGK--PPFYA------EDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPT 233
Query: 268 ER 269
+R
Sbjct: 234 KR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 61.2 bits (148), Expect = 2e-10
Identities = 65/273 (23%), Positives = 121/273 (44%), Gaps = 36/273 (13%)
Query: 33 EHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLT 85
E G+ + +VY+G K E + R+A+K N A R +FL EA + + + +
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72
Query: 86 NLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL----AQAL 137
LLG +G L++ E M L +L E +P++ L+ ++ + A +
Sbjct: 73 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132
Query: 138 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAFTPPE 191
Y + + ++ DL A + ED ++ FG+ ++ R G + + PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191
Query: 192 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQF 246
L+ G T S ++SFG +L ++ + P L + + L D+C + F
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLF 251
Query: 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
EL+R+ C QY P+ RP+ +++++
Sbjct: 252 ------ELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 60.4 bits (146), Expect = 4e-10
Identities = 67/277 (24%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 29 NIVSEHGEKAPNVVYKG------KLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRN 81
++ E G+ + +VY+G K E + R+AVK N A R +FL EA +
Sbjct: 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68
Query: 82 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHL---- 133
+ + LLG +G L+V E M + L +L E +P + L+ ++ +
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 134 AQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN------SRDGKSYSTNLAF 187
A + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 188 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCL 242
PE L+ G T S ++SFG +L ++ S P L + D D+C
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 247
Query: 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
E + L C Q+ P+ RP +V L
Sbjct: 248 E---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 7e-10
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 36/278 (12%)
Query: 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 86
EN++S + A YKGK ++N + VK N + + + +G+L++ +
Sbjct: 695 ENVISRGKKGAS---YKGKSIKNGMQFVVKEINDVNSIPSSEIAD----MGKLQHPNIVK 747
Query: 87 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY--CTSKG 144
L+G C L+ EY+ + L++ L + W R ++ + +A+AL + C
Sbjct: 748 LIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAKALRFLHCRCSP 802
Query: 145 RALYHDLNAYRILFDEDGNPRL--STFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 202
+ +L+ +I+ D P L S GL+ D K + ++ A+ PE T +T +S
Sbjct: 803 AVVVGNLSPEKIIIDGKDEPHLRLSLPGLL--CTDTKCFISS-AYVAPETRETKDITEKS 859
Query: 203 VIYSFGTLLLDLLSGKHIPPSHA--------LDLIR----DRNLQMLTDSCLEGQFT--D 248
IY FG +L++LL+GK P+ A ++ R D +L M D + G +
Sbjct: 860 DIYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQ 917
Query: 249 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286
++ E++ LA C +P RP ++ L + +
Sbjct: 918 NEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955
|
Length = 968 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-09
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V++G N +AVK + DP+ FL EA+ + +LR+ +L L C + +V
Sbjct: 22 VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
E M +L ++L +K + + +A + Y ++ ++ DL A +L E+
Sbjct: 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGEN 139
Query: 162 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+++ FGL + +R+G + + +T PE R + +S ++SFG LL ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197
Query: 215 LSGKHIP 221
++ +P
Sbjct: 198 VTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 1e-09
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 26/241 (10%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ G ++A+K + P FL+EA+ + +LR+++L L E + +V
Sbjct: 22 VWMGTWNGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVT 79
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
E+M +L L + +K + + +A + Y + ++ DL A IL ++
Sbjct: 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY-IERMNYIHRDLRAANILVGDN 138
Query: 162 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 215 LSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
++ +P L+ + +R +M C +G + EL++L C + +P ER
Sbjct: 197 VTKGRVPYPGMVNREVLEQV-ERGYRM---PCPQG--CPESLHELMKL---CWKKDPDER 247
Query: 270 P 270
P
Sbjct: 248 P 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 1e-09
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 18/237 (7%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ G ++AVK + P FLEEA+ + +LR+++L L E + +V
Sbjct: 22 VWMGTWNGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT 79
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
EYM +L L E +K + + +A + Y + ++ DL + IL +
Sbjct: 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IERMNYIHRDLRSANILVGDG 138
Query: 162 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 139 LVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 215 LSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 270
++ +P P + +R + + D L L +C + +P ERP
Sbjct: 197 VTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 2e-09
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 28/242 (11%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ G R+A+K + P FL+EA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
EYM +L L ++ + + +A + Y + ++ DL A IL E+
Sbjct: 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGEN 138
Query: 162 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+++ FGL + +R G + + +T PE GR T +S ++SFG LL +L
Sbjct: 139 LVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 196
Query: 215 LSGKHIP-----PSHALDLIRDRNLQMLTDS-CLEGQFTDDDGTELVRLASRCLQYEPRE 268
+ +P LD + +R +M C E L L +C + EP E
Sbjct: 197 TTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEE 246
Query: 269 RP 270
RP
Sbjct: 247 RP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 2e-09
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 127 LRVVLHLAQALEYC----TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182
R++ L AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 183 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 238
TP PE L +S I+S G L+ +L + PP A RN L
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTA------RNQLQLA 219
Query: 239 DSCLEGQFTDDDG---TELVRLASRCLQYEPRERPNPKSL 275
EG+F +EL + L +P +RP+ + L
Sbjct: 220 SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 3e-09
Identities = 64/284 (22%), Positives = 114/284 (40%), Gaps = 48/284 (16%)
Query: 30 IVSEHGEKAPNVVYKGKLEN------QRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNN 82
++ E G+ + +VY+G + + R+A+K N + + +FL EA + + +
Sbjct: 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCH 69
Query: 83 RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT- 141
+ LLG G L+V E M L +L P L + ++
Sbjct: 70 HVVRLLGVVSTGQPTLVVMELMAKGDLKSYL--RSRRPEAENNPGLGPPTLQKFIQMAAE 127
Query: 142 -SKGRALYH-------DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------- 184
+ G A DL A + ED ++ FG+ +RD Y T+
Sbjct: 128 IADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYRKGGKGL 182
Query: 185 --LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP---PSH--ALDLIRDRNLQML 237
+ + PE L+ G T +S ++SFG +L ++ + P S+ L + D L
Sbjct: 183 LPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDL 242
Query: 238 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 281
++C + +L+ L C QY P+ RP +V++L
Sbjct: 243 PENCPD---------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 3e-09
Identities = 55/252 (21%), Positives = 108/252 (42%), Gaps = 19/252 (7%)
Query: 35 GEKAPNVVYKGKLENQRRI-AVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 91
G+ + VV+K + +R+ A+K+ + +M + + ++EAR + +L ++ +
Sbjct: 9 GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68
Query: 92 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 151
+ + +V EY N L K L P+ R + + L + SK + L+ D+
Sbjct: 69 LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDI 127
Query: 152 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSF 207
+ + D N ++ G+ K D +++ + TP PE +S +++
Sbjct: 128 KSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWAL 187
Query: 208 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG---TELVRLASRCLQY 264
G +L + +GKH P A N L + G F +L +L +CL
Sbjct: 188 GVVLYECCTGKH--PFDA------NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK 239
Query: 265 EPRERPNPKSLV 276
+ R+RP+ L+
Sbjct: 240 DYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 7e-09
Identities = 59/275 (21%), Positives = 108/275 (39%), Gaps = 37/275 (13%)
Query: 35 GEKAPNVVYKGKLE----NQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 88
GE V +G+L +Q ++AVK + + + + +FL EA + + + L+
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 89 GCCCEGDER------LLVAEYMPNETLAKHLFH--WETHPMKWA--MRLRVVLHLAQALE 138
G C E +++ +M + L L + P K L+ ++ +A +E
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 139 YCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EY 192
Y +++ ++ DL A + ED ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 193 LRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFT 247
L T +S +++FG + ++ + P D +R N + CL+
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLD---- 242
Query: 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282
EL L C + +P++RP L L +
Sbjct: 243 -----ELYDLMYSCWRADPKDRPTFTKLREVLENI 272
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 8e-09
Identities = 66/279 (23%), Positives = 103/279 (36%), Gaps = 53/279 (18%)
Query: 29 NIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTN 86
++ G A VVY L N ++A+KR + + +E +++ Q + +
Sbjct: 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK 63
Query: 87 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV--------VLH-LAQAL 137
GDE LV Y+ +L MK + VL + + L
Sbjct: 64 YYTSFVVGDELWLVMPYLSGGSLL--------DIMKSSYPRGGLDEAIIATVLKEVLKGL 115
Query: 138 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG----LMKNSRDGKSYSTNLAFTP---- 189
EY S G+ ++ D+ A IL EDG+ +++ FG L + TP
Sbjct: 116 EYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMA 174
Query: 190 PEYLRTGRVTPESV-IYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLT----DS 240
PE + I+SFG ++L +G PP L MLT
Sbjct: 175 PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVL---------MLTLQNDPP 225
Query: 241 CLEGQFTDDD----GTELVRLASRCLQYEPRERPNPKSL 275
LE T D ++ S CLQ +P +RP + L
Sbjct: 226 SLE---TGADYKKYSKSFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 1e-08
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 34/261 (13%)
Query: 41 VVYKGKL--ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
VY G L + ++I AVK NR+ + QFL+E + + + +LLG C +
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 96 -ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154
L+V YM + L ++ ETH + L +A+ +EY SK + ++ DL A
Sbjct: 70 GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAAR 127
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYS 206
+ DE +++ FGL ++ D + YS + + + E L+T + T +S ++S
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187
Query: 207 FGTLLLDLLSGKHIPPSHALD-------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259
FG LL +L++ + PP +D L++ R L L+ ++ D L +
Sbjct: 188 FGVLLWELMT-RGAPPYPDVDSFDITVYLLQGRRL-------LQPEYCPD---PLYEVML 236
Query: 260 RCLQYEPRERPNPKSLVTALS 280
C +P RP LV+ +
Sbjct: 237 SCWHPKPEMRPTFSELVSRIE 257
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 55.5 bits (133), Expect = 2e-08
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 42/263 (15%)
Query: 53 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 112
+AVK + + F EA + L++ + G C EGD ++V EYM + L K
Sbjct: 38 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 97
Query: 113 L--------FHWETHP---MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
L E + + + L + +A + Y S+ ++ DL L E+
Sbjct: 98 LRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGEN 156
Query: 162 GNPRLSTFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSFGTL 210
++ FG+ SRD YST+ + + PPE + + T ES ++S G +
Sbjct: 157 LLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 211
Query: 211 LLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265
L ++ + GK + + ++ I + +C + E+ L C Q E
Sbjct: 212 LWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPK---------EVYDLMLGCWQRE 262
Query: 266 PRERPNPKSLVTALSPLQKETEV 288
P R N K + + L L K + V
Sbjct: 263 PHMRLNIKEIHSLLQNLAKASPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 2e-08
Identities = 50/246 (20%), Positives = 93/246 (37%), Gaps = 27/246 (10%)
Query: 42 VYKGKLENQ-RRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDE 96
VY ++ +AVK + + + E R + L++ + G E +
Sbjct: 16 VYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNT 75
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLA----QALEYCTSKGRALYH-DL 151
+ EY+ +L+ L + V+ + L Y S G H D+
Sbjct: 76 LNIFLEYVSGGSLSSLL------KKFGKLPEPVIRKYTRQILEGLAYLHSNGIV--HRDI 127
Query: 152 NAYRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIY 205
IL D DG +L+ FG K + + ++ TP PE +R + I+
Sbjct: 128 KGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIW 187
Query: 206 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265
S G ++++ +GK P S + + L + S + + E +CL+ +
Sbjct: 188 SLGCTVIEMATGKP-PWSELGNPM--AALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRD 244
Query: 266 PRERPN 271
P++RP
Sbjct: 245 PKKRPT 250
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 26/225 (11%)
Query: 69 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 128
F E A + QL + L L G C DE ++V EY+ L L H E + + +L
Sbjct: 48 FFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFL-HREKNNVSLHWKLD 105
Query: 129 VVLHLAQALEYCTSK--------GRALY---HDLNAYRILFDEDGNPRLSTFGLMKNSRD 177
V LA AL Y K G+ + + LN + F + +P + L + R
Sbjct: 106 VAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERV 165
Query: 178 GKSYSTNLAFTPPEYLRTGRVTPESV--IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 235
+ + PE +R G+ + +SFGT LL++ S P S L +
Sbjct: 166 ERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLS---TLSSSEKER 217
Query: 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280
D + D EL L ++C Y+P +RP+ ++++ L+
Sbjct: 218 FYQDQH---RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ G N ++AVK + + FLEEA + L++++L L + + ++
Sbjct: 22 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
EYM +L L E + + +A+ + Y K ++ DL A +L E
Sbjct: 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSES 139
Query: 162 GNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197
Query: 215 LSGKHIP 221
++ IP
Sbjct: 198 VTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 28/264 (10%)
Query: 33 EHGEKAPNVVYKGKLENQRR----IAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNL 87
E GE V +G+L+ + +A+K + R FL EA +GQ + + L
Sbjct: 16 EFGE-----VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL 70
Query: 88 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 147
G + +++ EYM N +L K L + + ++ +A ++Y + +
Sbjct: 71 EGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLSEMN-YV 128
Query: 148 YHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTN-----LAFTPPEYLRTGRVTPE 201
+ DL A IL + + ++S FGL + D ++ Y+T + +T PE + + T
Sbjct: 129 HRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSA 188
Query: 202 SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG---QFTDDDGTELVRLA 258
S ++SFG ++ +++S P D + Q + + +G D + L +L
Sbjct: 189 SDVWSFGIVMWEVMSYGERP-------YWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLM 241
Query: 259 SRCLQYEPRERPNPKSLVTALSPL 282
C Q + ERP +V+ L +
Sbjct: 242 LDCWQKDRNERPTFSQIVSTLDKM 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 53.9 bits (129), Expect = 4e-08
Identities = 65/284 (22%), Positives = 117/284 (41%), Gaps = 48/284 (16%)
Query: 31 VSEHGEKAPNVVYKGKL-----ENQRRIAVKRF----NRMAWPDPRQFLEEARSVGQLRN 81
+ E GE A +YKG L ++ + +A+K N W + F +EA + +L +
Sbjct: 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASLMAELHH 66
Query: 82 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHP-----------MKWAMR---- 126
+ LLG + ++ EY+ L + L H +K ++
Sbjct: 67 PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF 126
Query: 127 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 184
L + + +A +EY +S ++ DL A IL E + ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 185 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 235
+ + PPE + G+ + +S I+SFG +L ++ S P ++++R R L
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
++ C ++ L + C Q P RP K + T L
Sbjct: 246 PCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 6e-08
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 9/156 (5%)
Query: 67 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 126
R FL EA ++GQ ++ + L G G+ ++V EYM N L L E + A +
Sbjct: 51 RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQ 108
Query: 127 LRVVLH-LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN- 184
L +L LA ++Y + G ++ L A+++L + D ++S F ++ + Y+T
Sbjct: 109 LMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMS 167
Query: 185 ----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 216
+ + PE ++ + S ++SFG ++ +++S
Sbjct: 168 GKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 53.2 bits (127), Expect = 8e-08
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 11/230 (4%)
Query: 51 RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 110
+ +A+K+ N P + E + +L+N + N L GDE +V EY+ +L
Sbjct: 45 QEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT 104
Query: 111 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 170
+ + A R L QALE+ + + ++ D+ + +L DG+ +L+ FG
Sbjct: 105 DVVTETCMDEAQIAAVCRECL---QALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFG 160
Query: 171 LMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 226
+S + + TP PE + P+ I+S G + ++++ G+ PP
Sbjct: 161 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PPYLNE 218
Query: 227 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
+ +R L + T+ E Q + +RCL+ + +R + K L+
Sbjct: 219 NPLRALYL-IATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 1e-07
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQ 413
K G+ F+ D +AIE Y + ++ + Y +L YL + ++AL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 414 IISP 417
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 31/228 (13%)
Query: 69 FLEEARSVGQLRNNRLTNLLGCCCEGDER------LLVAEYMPNETLAKHLFHWETHP-- 120
FL EA + + + + L+G C + E +++ +M + L L +
Sbjct: 47 FLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCP 106
Query: 121 --MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178
+ M ++ + +A +EY +SK ++ DL A + +E+ N ++ FGL K +G
Sbjct: 107 QYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNG 165
Query: 179 KSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALD 227
Y P E L T +S ++SFG + ++ + P S D
Sbjct: 166 DYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYD 225
Query: 228 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+R N CL+G L L S C P++RP+ ++L
Sbjct: 226 YLRQGNRLKQPPDCLDG---------LYSLMSSCWLLNPKDRPSFETL 264
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 2e-07
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 35 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
GDE +V EY+ +L + + A R L QALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSN-QVIHRDIKS 144
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 210 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
+ ++++ G+ PP + +R L + T+ E Q + +RCL + +R
Sbjct: 205 MAIEMIEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261
Query: 270 PNPKSLV 276
+ K L+
Sbjct: 262 GSAKELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 3e-07
Identities = 51/236 (21%), Positives = 103/236 (43%), Gaps = 13/236 (5%)
Query: 53 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 112
+AVK +FL+EA + ++++ L LLG C ++ E+M L +
Sbjct: 34 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92
Query: 113 LFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 172
L + + L + ++ A+EY K ++ DL A L E+ +++ FGL
Sbjct: 93 LRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLS 151
Query: 173 KNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL 226
+ G +Y+ + + +T PE L + + +S +++FG LL ++ + + P +
Sbjct: 152 RLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 209
Query: 227 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282
DL + L + + + ++ L C Q+ P +RP+ + A +
Sbjct: 210 DL---SQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 51.6 bits (123), Expect = 3e-07
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 12/247 (4%)
Query: 35 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93
G+ A VY + + +A+K+ N P + E + + +N + N L
Sbjct: 28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
GDE +V EY+ +L + + A R L QAL++ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSN-QVIHRDIKS 143
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 210 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
+ ++++ G+ PP + +R L + T+ E Q + +RCL+ + R
Sbjct: 204 MAIEMVEGE--PPYLNENPLRALYL-IATNGTPELQNPERLSAVFRDFLNRCLEMDVDRR 260
Query: 270 PNPKSLV 276
+ K L+
Sbjct: 261 GSAKELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 5e-07
Identities = 52/264 (19%), Positives = 103/264 (39%), Gaps = 44/264 (16%)
Query: 53 IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL-- 109
+AVK A + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 110 --------------------AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 149
+ +L + + + + +++ ++Y ++ + ++
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQY-LAEMKLVHR 151
Query: 150 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV 203
DL A +L E ++S FGL ++ + SY + + E L T +S
Sbjct: 152 DLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD 211
Query: 204 IYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258
++SFG LL ++++ G + I P +L++ ++C E E+ L
Sbjct: 212 VWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSE---------EMYNLM 262
Query: 259 SRCLQYEPRERPNPKSLVTALSPL 282
C + EP +RP + L +
Sbjct: 263 LTCWKQEPDKRPTFADISKELEKM 286
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 5e-07
Identities = 64/266 (24%), Positives = 104/266 (39%), Gaps = 45/266 (16%)
Query: 53 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 112
+AVK + F EA + L++ + G C +GD ++V EYM + L K
Sbjct: 38 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 97
Query: 113 LFHWETHPM----------KWAMRLRVVLH----LAQALEYCTSKGRALYHDLNAYRILF 158
L M K + L +LH +A + Y S+ ++ DL L
Sbjct: 98 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLV 156
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVIYSF 207
G L G SRD YST+ + + PPE + + T ES ++SF
Sbjct: 157 ---GANLLVKIGDFGMSRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211
Query: 208 GTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262
G +L ++ + GK + + ++ I + C + E+ + C
Sbjct: 212 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---------EVYDIMLGCW 262
Query: 263 QYEPRERPNPKSLVTALSPLQKETEV 288
Q EP++R N K + L L K T +
Sbjct: 263 QREPQQRLNIKEIYKILHALGKATPI 288
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 6e-07
Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 25/223 (11%)
Query: 69 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLR 128
FL EA + L++++L L + + ++ E+M +L L E +
Sbjct: 48 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 106
Query: 129 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-------NSRDGKSY 181
+A+ + + + ++ DL A IL +++ FGL + +R+G +
Sbjct: 107 FSAQIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA-LDLIR--DRNLQM- 236
+ +T PE + G T +S ++SFG LL+++++ IP P + ++IR +R +M
Sbjct: 166 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 223
Query: 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
++C E EL + RC + P ERP + + + L
Sbjct: 224 RPENCPE---------ELYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 6e-07
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 74 RSVGQLRNNRLTNLL---GCCCEGDER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLR 128
+ + LRN N++ G C E L+ E++P+ +L ++L + + +L+
Sbjct: 55 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNK-INLKQQLK 113
Query: 129 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST----- 183
+ + + ++Y S+ + ++ DL A +L + + ++ FGL K K Y T
Sbjct: 114 YAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDL 172
Query: 184 --NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS---GKHIPPSHALDLIRDRNLQM-- 236
+ + PE L + S ++SFG L +LL+ + P + L +I + QM
Sbjct: 173 DSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTV 232
Query: 237 --LTDSCLEGQ---FTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
L EG+ + E+ +L +C +++P +R ++L+
Sbjct: 233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-07
Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
G++ ++ D +A+E Y + ++ + Y + Y ++AL D +A
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALE 62
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 452
+ P A Y A +G EA A ++ L+
Sbjct: 63 LDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELDPN 100
|
Length = 100 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 6e-07
Identities = 58/263 (22%), Positives = 107/263 (40%), Gaps = 38/263 (14%)
Query: 70 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 126
+E + +G+ +N + NLLG C + ++ EY L ++L M ++
Sbjct: 68 MEMMKMIGKHKN--IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125
Query: 127 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175
+ +A+ +EY S+ + ++ DL A +L ED +++ FGL ++
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184
Query: 176 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-----KHIPPSH 224
+ Y +TN + + PE L T +S ++SFG LL ++ + IP
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244
Query: 225 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284
L+++ + +C EL + C P +RP K LV L +
Sbjct: 245 LFKLLKEGHRMDKPANCTH---------ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295
Query: 285 ETEVPSHVLMGIPHSASVSPLSP 307
T ++ + +P SP P
Sbjct: 296 VTSTDEYLDLSVPFE-QYSPGCP 317
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 7e-07
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 27/259 (10%)
Query: 42 VYKG---KLENQR-RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDE 96
VY+G EN++ +AVK P R+ FL+EA + Q + + L+G E +
Sbjct: 22 VYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156
+V E P L +L + + A + L+ AL Y SK R ++ D+ A +
Sbjct: 81 VWIVMELAPLGELRSYL-QVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNV 138
Query: 157 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-----PEYLRTGRVTPESVIYSFGTLL 211
L +L FGL + D Y + P PE + R T S ++ FG +
Sbjct: 139 LVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 198
Query: 212 LDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 266
++L G + + + I + + +C L L ++C Y+P
Sbjct: 199 WEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNC---------PPTLYSLMTKCWAYDP 249
Query: 267 RERPNPKSLVTALSPLQKE 285
+RP L LS + +E
Sbjct: 250 SKRPRFTELKAQLSDILQE 268
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 52/242 (21%), Positives = 94/242 (38%), Gaps = 26/242 (10%)
Query: 53 IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 111
+AVK D FL EA + + + + L+G E R ++ E M L
Sbjct: 39 VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS 98
Query: 112 HLFHWE---THPMKWAMR--LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR- 165
L P M+ L +A+ +Y ++ D+ A L G R
Sbjct: 99 FLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRV 157
Query: 166 --LSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG 217
++ FG+ ++ Y + + PPE G T ++ ++SFG LL ++ S
Sbjct: 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL 217
Query: 218 KHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERPNPKS 274
++P P N +++ G+ G + R+ + C Q+ P +RPN +
Sbjct: 218 GYMPYPGR-------TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFAT 270
Query: 275 LV 276
++
Sbjct: 271 IL 272
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 1e-06
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 51/257 (19%)
Query: 53 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 111
+AVK A + R FL+E + + +L++ + LLG C + D ++ EYM N L +
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 112 HLFH--------------WETHPM---KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154
L H + ++ L V L +A ++Y +S ++ DL
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATR 167
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFG 208
L E+ +++ FG+ +N G Y P E + G+ T S +++FG
Sbjct: 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227
Query: 209 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL---EGQFTDDDGTE------------ 253
L ++L L +++ LTD + G+F D G +
Sbjct: 228 VTLWEILM-----------LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQG 276
Query: 254 LVRLASRCLQYEPRERP 270
L L +C + RERP
Sbjct: 277 LYELMLQCWSRDCRERP 293
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 31/250 (12%)
Query: 41 VVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARS----VGQLRNNRLTNLLGCCCEGD 95
VVYKG LE +A+K+ + + L+ + L++ + +G D
Sbjct: 15 VVYKGLNLETGDFVAIKQISLEK--IKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD 72
Query: 96 ERLLVAEYMPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154
++ EY N +L + + + P A+ + VL Q L Y +G ++ D+ A
Sbjct: 73 SLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVL---QGLAYLHEQG-VIHRDIKAA 128
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 210
IL +DG +L+ FG+ D ++ TP PE + + S I+S G
Sbjct: 129 NILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCT 188
Query: 211 LLDLLSGKHIPPSHALDLIRDRN-----LQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265
+++LL+G PP + D N +++ D + EL +C Q +
Sbjct: 189 VIELLTGN--PPYY------DLNPMAALFRIVQDDHPP--LPEGISPELKDFLMQCFQKD 238
Query: 266 PRERPNPKSL 275
P RP K L
Sbjct: 239 PNLRPTAKQL 248
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 49.3 bits (117), Expect = 2e-06
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 19/243 (7%)
Query: 42 VYKGKLENQRR--IAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERL 98
VYKG ++N+ + +A+K + D + +++ +V Q + +T G +G +
Sbjct: 20 VYKG-IDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLW 78
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158
++ EY+ + L + P++ ++ + + L+Y S+ R ++ D+ A +L
Sbjct: 79 IIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLL 134
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 214
E G+ +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194
Query: 215 LSGKHIPPSHALDLIRDRNL-QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 273
G+ PP+ L +R L + LEGQ++ CL +PR RP K
Sbjct: 195 AKGE--PPNSDLHPMRVLFLIPKNSPPTLEGQYS----KPFKEFVEACLNKDPRFRPTAK 248
Query: 274 SLV 276
L+
Sbjct: 249 ELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 26/225 (11%)
Query: 69 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH-PMKWAMRL 127
F E A + Q+ + L + G C G E ++V E++ + L L + P+ W ++
Sbjct: 63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KI 120
Query: 128 RVVLHLAQALEYCTSK----GRALYHDLNAYRILFDEDGNP--RLSTFGLMKNSRDGKSY 181
V LA AL Y K G ++ R+ E +P +LS G+ + +
Sbjct: 121 TVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREER 180
Query: 182 STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQ 235
+ + PE + G ++ + +SFGT LL++ +P PS + ++ +
Sbjct: 181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK-ERFYEKKHR 239
Query: 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280
+ SC EL L S+CL YEP +RP+ ++++ L+
Sbjct: 240 LPEPSC----------KELATLISQCLTYEPTQRPSFRTILRDLT 274
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 56/260 (21%), Positives = 97/260 (37%), Gaps = 43/260 (16%)
Query: 42 VYKGKL-------ENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCE 93
VY+G R+AVK + A + +FL+EA + + + LLG C
Sbjct: 11 VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-----SKGRALY 148
+ + ++ E M L +L + L + L L+ + ++
Sbjct: 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPL-LTLKELLDICLDVAKGCVYLEQMHFIH 129
Query: 149 HDLNAYRILFDEDGNPR-----LSTFGLMKNSRDGKSYST------NLAFTPPEYLRTGR 197
DL A L E G + FGL ++ Y + + PE L G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189
Query: 198 VTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQF------TDDD 250
T +S ++SFG L+ ++L+ P P+ N ++L G+ D
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALN-------NQEVLQHVTAGGRLQKPENCPDK- 241
Query: 251 GTELVRLASRCLQYEPRERP 270
+ +L + C +P ERP
Sbjct: 242 ---IYQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 3e-06
Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 16/224 (7%)
Query: 69 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF-------HWETHPM 121
F E +L + + LLG C E + ++ EY L + L + P+
Sbjct: 55 FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
++ + +A +++ S R ++ DL A L ++S L K+ + + Y
Sbjct: 115 STKQKVALCTQIALGMDH-LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173
Query: 182 STN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 236
L + PE ++ + +S ++SFG L+ ++ + +P L + L
Sbjct: 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVLNR 230
Query: 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280
L LE + + L +L +RC P++RP+ LV+AL
Sbjct: 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 19/200 (9%)
Query: 35 GEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 91
GE VVYK + +A+K+ + P+ L E + + +L + + LL
Sbjct: 8 GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF 67
Query: 92 CEGDERLLVAEYMPNETLAKHLFHWET----HPMKWAMRLRVVLHLAQALEYCTSKGRAL 147
+ LV E+M + L K + + +K + L Q L +C S G L
Sbjct: 68 RHKGDLYLVFEFM-DTDLYKLIKDRQRGLPESLIKSYL-----YQLLQGLAFCHSHG-IL 120
Query: 148 YHDLNAYRILFDEDGNPRLSTFGLMKNSR-DGKSYSTNLA---FTPPEYLRTGRVTPESV 203
+ DL +L + +G +L+ FGL ++ + Y+ + + PE L + V
Sbjct: 121 HRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPV 180
Query: 204 -IYSFGTLLLDLLSGKHIPP 222
I+S G + +LLS + + P
Sbjct: 181 DIWSVGCIFAELLSRRPLFP 200
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 48.0 bits (114), Expect = 3e-06
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 20/212 (9%)
Query: 69 FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF-HWETHPMKWAMRL 127
F E A + Q+ + + L G C E ++V E++ L LF H ++ + +
Sbjct: 51 FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPL--DLFMHRKSDVLTTPWKF 108
Query: 128 RVVLHLAQALEYCTSK----GRALYHDLNAYRILFDEDGNP--RLSTFGLMKNSRDGKSY 181
+V LA AL Y K G ++ R D + P +LS G+ +
Sbjct: 109 KVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQEC 168
Query: 182 STNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 240
+ + PE + + + + +SFGT L ++ IP ++D+ L +
Sbjct: 169 VERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIP-------LKDKTLAE-KER 220
Query: 241 CLEGQF--TDDDGTELVRLASRCLQYEPRERP 270
EGQ EL L + C+ Y+P +RP
Sbjct: 221 FYEGQCMLVTPSCKELADLMTHCMNYDPNQRP 252
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 37/235 (15%)
Query: 70 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL---------FHWET-- 118
+E + +G+ +N + NLLG C + ++ EY L ++L + ++
Sbjct: 71 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128
Query: 119 ---HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-- 173
M + + +A+ +EY S+ + ++ DL A +L E+ +++ FGL +
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTENNVMKIADFGLARDV 187
Query: 174 NSRDGKSYSTN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGK---HIPPSH 224
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247
Query: 225 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
L+++ + +C EL + C P RP K LV L
Sbjct: 248 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAIPSHRPTFKQLVEDL 293
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 4e-06
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 129 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 188
++ + LEY S + ++ D+ A IL +E+G +L+ FG+ D + + T
Sbjct: 104 ILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGT 162
Query: 189 P----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDS 240
P PE ++ ++ I+S G +++ GK I P A+ +I ++ L+D
Sbjct: 163 PFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP 222
Query: 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ E +CL +P ERP+ L
Sbjct: 223 -------EKWSPEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
GDE +V E++ L + H + + A V L + +AL ++G ++ D+ +
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLKALSVLHAQG-VIHRDIKS 144
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL DG +LS FG +L TP PE + PE I+S G
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGI 204
Query: 210 LLLDLLSGK----HIPPSHALDLIRD 231
++++++ G+ + PP A+ +IRD
Sbjct: 205 MVIEMVDGEPPYFNEPPLKAMKMIRD 230
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 47.1 bits (112), Expect = 8e-06
Identities = 62/276 (22%), Positives = 107/276 (38%), Gaps = 47/276 (17%)
Query: 37 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGD 95
+AP ++ E +AVK A D + F EA + + + + LLG C G
Sbjct: 25 RAPGLL---PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81
Query: 96 ERLLVAEYMPNETLAKHLFHWETH--------------------PMKWAMRLRVVLHLAQ 135
L+ EYM L + L H P+ +L + +A
Sbjct: 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141
Query: 136 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTP 189
+ Y S+ + ++ DL L E+ +++ FGL +N Y + + + P
Sbjct: 142 GMAY-LSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMP 200
Query: 190 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------LIRDRNLQMLTDSCLE 243
PE + R T ES ++++G +L ++ S + P + + +RD N+ D+C
Sbjct: 201 PESIFYNRYTTESDVWAYGVVLWEIFS-YGMQPYYGMAHEEVIYYVRDGNVLSCPDNC-- 257
Query: 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
EL L C P +RP+ S+ L
Sbjct: 258 -------PLELYNLMRLCWSKLPSDRPSFASINRIL 286
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 131 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 184
+ +A + Y SK R ++ DL A IL D ++ FGLM+ + +
Sbjct: 104 VQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKV 162
Query: 185 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-----GKHIPPSHALDLIRDRNLQMLT 238
A+ PE LRT + S ++ FG L ++ + + S L I D+ + L
Sbjct: 163 PFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DKEGERLE 221
Query: 239 --DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280
++C + ++ + +C + P +RP +L L
Sbjct: 222 RPEACPQ---------DIYNVMLQCWAHNPADRPTFAALREFLP 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 12/248 (4%)
Query: 35 GEKAPNVVYKG-KLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93
G+ A VY + + +A+K+ N P + E + + ++ + N L
Sbjct: 28 GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
GDE +V EY+ +L + + A R L QALE+ S ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 143
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 210 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
+ ++++ G+ PP + +R L + T+ E Q + +RCL+ + +R
Sbjct: 204 MAIEMVEGE--PPYLNENPLRALYL-IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 260
Query: 270 PNPKSLVT 277
+ K L+
Sbjct: 261 GSAKELLQ 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 33 EHGEKAPNVVYKGKLENQRR----IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNL 87
E GE V++G L+ R +A+K RQ FL EA +GQ ++ + L
Sbjct: 17 EFGE-----VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71
Query: 88 LGCCCEGDERLLVAEYMPNETLAKHL--FHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 145
G + +++ EYM N L K+L E + LR +A ++Y S
Sbjct: 72 EGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKY-LSDMN 127
Query: 146 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYSTN-----LAFTPPEYLRTGRV 198
++ DL A IL + + ++S FGL + D +Y+T+ + +T PE + +
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187
Query: 199 TPESVIYSFGTLLLDLLS 216
T S ++SFG ++ +++S
Sbjct: 188 TSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 13/150 (8%)
Query: 84 LTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCT 141
LT+L C + E L V EY+ L +FH ++ H + L++
Sbjct: 58 LTHLY-CTFQTKENLFFVMEYLNGGDL---MFHIQSCHKFDLPRATFYAAEIICGLQFLH 113
Query: 142 SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGR 197
SKG +Y DL IL D DG+ +++ FG+ K + G + + TP PE L +
Sbjct: 114 SKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQK 172
Query: 198 VTPESVIYSFGTLLLDLLSGKHIPPSHALD 227
+SFG LL ++L G+ P H D
Sbjct: 173 YNTSVDWWSFGVLLYEMLIGQ--SPFHGHD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 46/197 (23%), Positives = 79/197 (40%), Gaps = 31/197 (15%)
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
GDE +V E++ L + H + + A VL +AL + ++G ++ D+ +
Sbjct: 88 GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVL---KALSFLHAQG-VIHRDIKS 143
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL DG +LS FG +L TP PE + E I+S G
Sbjct: 144 DSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 203
Query: 210 LLLDLLSGK----HIPPSHALDLIRD------RNLQMLTDSCLEGQFTDDDGTELVRLAS 259
++++++ G+ + PP A+ IRD +NL ++ L
Sbjct: 204 MVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVS-------------PRLRSFLD 250
Query: 260 RCLQYEPRERPNPKSLV 276
R L +P +R L+
Sbjct: 251 RMLVRDPAQRATAAELL 267
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 58/235 (24%), Positives = 97/235 (41%), Gaps = 37/235 (15%)
Query: 70 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR--- 126
+E + +G+ +N + NLLG C + ++ EY L ++L M++
Sbjct: 74 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131
Query: 127 -----------LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175
+ +A+ +EY SK + ++ DL A +L ED +++ FGL ++
Sbjct: 132 VPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 190
Query: 176 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKHIPPSHALD 227
Y +TN + + PE L T +S ++SFG LL ++ L G P +
Sbjct: 191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250
Query: 228 LIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQYEPRERPNPKSLVTAL 279
L + +L EG D EL + C P +RP K LV L
Sbjct: 251 LFK-----LLK----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 42 VYKGK-LENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER- 97
VYK + + +A+K+ P + E + + +LR+ + L +
Sbjct: 15 VYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS 74
Query: 98 -LLVAEYMPNE---TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
+V EYM ++ L + +K M+ L + L+Y S G L+ D+
Sbjct: 75 IYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-----QLLEGLQYLHSNG-ILHRDIKG 128
Query: 154 YRILFDEDGNPRLSTFGLMK--NSRDGKSYSTNLAFT----PPEYLRTG--RVTPESVIY 205
IL + DG +L+ FGL + R+ Y TN T PPE L G R PE ++
Sbjct: 129 SNILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELL-LGATRYGPEVDMW 186
Query: 206 SFGTLLLDLLSGKHIPP----SHALDLI 229
S G +L +L GK I L+ I
Sbjct: 187 SVGCILAELFLGKPIFQGSTELEQLEKI 214
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 133 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS--TNLAFT 188
LA AL++ S G +Y DL IL DE+G+ +L+ FGL K S D K+YS + +
Sbjct: 107 LALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYM 165
Query: 189 PPEYLRTGRVTPESVIYSFGTLLLDLLSG 217
PE + T + +SFG L+ ++L+G
Sbjct: 166 APEVVNRRGHTQSADWWSFGVLMFEMLTG 194
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 1e-05
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 44/250 (17%)
Query: 53 IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 111
+AVK R FL+E + + +L+N + LLG C D ++ EYM N L +
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 112 HLFHWETHP----------MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161
L E + A L + + +A ++Y S ++ DL L
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNH 165
Query: 162 GNPRLSTFGLMKNSRDGKSYSTNLAFTPP------EYLRTGRVTPESVIYSFGTLLLDLL 215
+++ FG+ +N G Y P E + G+ T S +++FG L ++
Sbjct: 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225
Query: 216 SGKHIPPSHALDLIRDRNLQMLTDSCL---EGQFTDDDGTE------------LVRLASR 260
+ L +++ +L+D + G+F + G + + +L R
Sbjct: 226 T-----------LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMR 274
Query: 261 CLQYEPRERP 270
C + ++RP
Sbjct: 275 CWSRDIKDRP 284
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 35/225 (15%)
Query: 80 RNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL--------------FHWETHPMKWAM 125
++ + NLLG C + ++ EY L + L + +
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 126 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--ST 183
+ +A+ +EY S+ R ++ DL A +L ED +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 184 N----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKH---IPPSHALDLIRDRNL 234
N + + PE L T +S ++SFG L+ ++ L G IP L+R+ +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR 254
Query: 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
+C EL L C P +RP K LV AL
Sbjct: 255 MDKPSNCTH---------ELYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 24/253 (9%)
Query: 45 GKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104
G L N R + F+ P+Q V Q R +R G +L + +
Sbjct: 97 GNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIE------AGQASVLFSRFQ 150
Query: 105 PNETLAKHLFH-----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159
P+ + + + W++ P+ + +A+ +E+ S+ + ++ DL A IL
Sbjct: 151 PSTSGSTNPPQETDDLWKS-PLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLS 208
Query: 160 EDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFGTLLLD 213
E+ ++ FGL ++ Y L + PE + T +S ++SFG LL +
Sbjct: 209 ENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWE 268
Query: 214 LLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 272
+ S G P ++ + Q L D + ++ E+ R+ C Q +P+ERP
Sbjct: 269 IFSLGASPYPGVQIN---EEFCQRLKDGT-RMRAPENATPEIYRIMLACWQGDPKERPTF 324
Query: 273 KSLVTALSPLQKE 285
+LV L L +E
Sbjct: 325 SALVEILGDLLQE 337
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 2e-05
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 21/240 (8%)
Query: 37 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
KA +Y K +++R+ ++ +MA + ++ LE+ S R L E +
Sbjct: 15 KATGKMYACKKLDKKRLKKRKGEQMALNE-KKILEKVSS-------RFIVSLAYAFETKD 66
Query: 97 RL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLN 152
L LV M L H+++ A R + + AQ LE+ + R +Y DL
Sbjct: 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEA---RAIFYAAQIICGLEHLHQR-RIVYRDLK 122
Query: 153 AYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 209
+L D+ GN R+S GL +K + K + + PE L+ ++ G
Sbjct: 123 PENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGC 182
Query: 210 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
L ++++G P + + L+ T + ++ D E L LQ +P +R
Sbjct: 183 TLYEMIAG-RSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 2e-05
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 37/235 (15%)
Query: 70 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM--------------PNETLAKHLFH 115
+E + +G+ +N + NLLG C + +V EY P E +
Sbjct: 66 MEMMKMIGKHKN--IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123
Query: 116 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175
+ + +A+ +E+ SK + ++ DL A +L ED +++ FGL ++
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182
Query: 176 RDGKSY--STN----LAFTPPEYLRTGRVTPESVIYSFGTLLLDL--LSGKHIP--PSHA 225
Y +TN + + PE L T +S ++SFG LL ++ L G P P
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242
Query: 226 L-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
L L+++ +C + EL L C P +RP K LV L
Sbjct: 243 LFKLLKEGYRMEKPQNCTQ---------ELYHLMRDCWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VY K + +AVK + ++FL EA + QL + + L+G C +G+ +LV
Sbjct: 15 VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVC-KGEPLMLV 73
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLH-LAQALEYCTSKGRALYHDLNAYRILFD 159
E P L K+L + L+ + H +A + Y SK ++ DL A +L
Sbjct: 74 MELAPLGPLLKYL---KKRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLV 129
Query: 160 EDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGTLLL 212
++S FG+ + G Y L + PE + G+ + +S ++S+G L
Sbjct: 130 NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLW 189
Query: 213 DLLS 216
+ S
Sbjct: 190 EAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 2e-05
Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 70 LEEARSVGQLRNNRLTNLLGCCCEGDERLL-VAEYMPNETLAKHLFHWETHPMKWAMRLR 128
+ E R + RN+ L CC + +RL V E++ L +FH + R R
Sbjct: 43 MTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARAR 99
Query: 129 V-VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLA 186
+ AL + KG +Y DL +L D +G+ +L+ FG+ K +GK+ ST
Sbjct: 100 FYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST-FC 157
Query: 187 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP 221
TP PE L+ P ++ G LL ++L G H P
Sbjct: 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 3e-05
Identities = 37/152 (24%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 78 QLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQAL 137
+L++ + LG + D + EY+P ++A L ++ + V + + L
Sbjct: 62 ELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEE--TLVRNFVRQILKGL 119
Query: 138 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGK------SYSTNLAF 187
Y ++G ++ D+ IL D G ++S FG+ K NS K S ++ +
Sbjct: 120 NYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFW 178
Query: 188 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH 219
PE ++ T ++ I+S G L++++L+GKH
Sbjct: 179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 3e-05
Identities = 66/286 (23%), Positives = 113/286 (39%), Gaps = 58/286 (20%)
Query: 33 EHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN 86
E GE A V+ + N + +AVK + + F EA + L++ +
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71
Query: 87 LLGCCCEGDERLLVAEYMPNETLAKHLFHWETH----------------PMKWAMRLRVV 130
G C EG L+V EYM + L + L +H + L +
Sbjct: 72 FYGVCTEGRPLLMVFEYMRHGDLNRFL---RSHGPDAKILAGGEDVAPGQLTLGQMLAIA 128
Query: 131 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 184
+A + Y S ++ DL L + ++ FG+ SRD YST+
Sbjct: 129 SQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGG 182
Query: 185 -----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLI-RDRN 233
+ + PPE + + T ES I+SFG +L ++ + GK + + A++ I + R
Sbjct: 183 RTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRE 242
Query: 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
L+ +C E+ + C Q EP++R K + + L
Sbjct: 243 LER-PRTC---------PPEVYAIMQGCWQREPQQRMVIKDIHSRL 278
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 4e-05
Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 42/281 (14%)
Query: 31 VSEHGEKAPNVVYKGKL------ENQRRIAVKRF-NRMAWPDPRQFLEEARSVGQLRNNR 83
+ E GE VYKG L E + +A+K ++ P +F EA +L++
Sbjct: 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPN 69
Query: 84 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHP----------MKWAMR----LRV 129
+ LLG + ++ Y + L + L H +K + + +
Sbjct: 70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHI 129
Query: 130 VLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST------ 183
V +A +E+ +S ++ DL +L + N ++S GL + Y
Sbjct: 130 VTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLL 188
Query: 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT 238
+ + PE + G+ + +S I+S+G +L ++ S P +++IR+R +
Sbjct: 189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP 248
Query: 239 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
D C +T L C P RP K + + L
Sbjct: 249 DDCPAWVYT---------LMLECWNEFPSRRPRFKDIHSRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 44.4 bits (106), Expect = 5e-05
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 28/156 (17%)
Query: 133 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF----- 187
L AL+Y S+ + L+ D+ I +G +L FG+ K S+ +
Sbjct: 112 LCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGI------SKVLSSTVDLAKTVV 164
Query: 188 -TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 242
TP PE + +S I+S G +L +L + KH P NL L L
Sbjct: 165 GTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH--PFEG------ENLLELALKIL 216
Query: 243 EGQFTDDD---GTELVRLASRCLQYEPRERPNPKSL 275
+GQ+ +EL L S LQ +P ERP+ +
Sbjct: 217 KGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQI 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 5e-05
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 28/246 (11%)
Query: 53 IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER--LLVAEYMPNETLA 110
+AVK+ R F E + L+++ + G C R LV EY+P +L
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 111 KHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 167
+L + H + R +++L+ +Q +EY SK R ++ DL IL + + ++
Sbjct: 96 DYL---QKHRERLDHR-KLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIG 150
Query: 168 TFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 220
FGL K K Y + + PE L + + S ++SFG +L +L +
Sbjct: 151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDK 210
Query: 221 ---PPSHALDLI-RDRNLQMLTDSCLE-----GQFTDDDG--TELVRLASRCLQYEPRER 269
PP+ + ++ D+ QM+ +E G+ G E+ + C +P +R
Sbjct: 211 SCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQR 270
Query: 270 PNPKSL 275
P+ L
Sbjct: 271 PSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 137 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY 192
L++ SKG +Y DL ++ D DG+ +++ FG+ K + G + ++ TP PE
Sbjct: 109 LQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEI 167
Query: 193 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 227
L+ + T +SFG LL ++L G+ P H D
Sbjct: 168 LQGLKYTFSVDWWSFGVLLYEMLIGQ--SPFHGDD 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 5e-05
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158
L+ +Y+ L HL+ E H + +R+ + + AL+ + +Y D+ IL
Sbjct: 82 LILDYVNGGELFTHLYQRE-HFTESEVRV-YIAEIVLALD-HLHQLGIIYRDIKLENILL 138
Query: 159 DEDGNPRLSTFGLMK-----NSRDGKSYSTNLAFTPPEYLRTGRVTPESVI--YSFGTLL 211
D +G+ L+ FGL K S+ + + PE +R G + + +S G L
Sbjct: 139 DSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT 198
Query: 212 LDLLSG 217
+LL+G
Sbjct: 199 FELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 6e-05
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 25/246 (10%)
Query: 42 VYKGKLEN--QRRIAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERL 98
V+KG ++N Q+ +A+K + D + +++ +V Q + +T G + +
Sbjct: 20 VFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 78
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158
++ EY+ + L E P+ ++ + + L+Y S+ + ++ D+ A +L
Sbjct: 79 IIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLL 134
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 214
E G +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 135 SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL 194
Query: 215 LSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 270
G+ + P L LI N LEG ++ L CL EP RP
Sbjct: 195 AKGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYS----KPLKEFVEACLNKEPSFRP 245
Query: 271 NPKSLV 276
K L+
Sbjct: 246 TAKELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 6e-05
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 67 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET----LAKHLFHWETHPMK 122
R FL EA +GQ + + +L G + ++V EYM N + L KH + +
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109
Query: 123 WAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KS 180
+R +A ++Y + G ++ DL A IL + + ++S FGL + D +
Sbjct: 110 GMLR-----GIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163
Query: 181 YSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 216
Y+T + +T PE + + T S ++S+G ++ +++S
Sbjct: 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 7e-05
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 125 MRLRVVLHLAQA----LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRD 177
+ + ++ +A A L Y + R ++ D+ IL + G +L FG+ + NS
Sbjct: 100 IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159
Query: 178 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK------------HIPPSHA 225
T+ + PE ++ G+ T +S ++S G +++L GK P
Sbjct: 160 DTFVGTS-TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGI 218
Query: 226 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
LDL++ + +Q F +D L CL +P ERP P+ L
Sbjct: 219 LDLLQ-QIVQEPPPRLPSSDFPED----LRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 43/200 (21%)
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYR 155
LV EY+P LA L + + A +++A+ ALEY S G ++ DL
Sbjct: 70 LVMEYLPGGDLASLLENVGSLDEDVA-----RIYIAEIVLALEYLHSNG-IIHRDLKPDN 123
Query: 156 ILFDEDGNPRLSTFGLMK-------NSRDGKSYSTNLAFTPPEYLRTGRVTPESVI---- 204
IL D +G+ +L+ FGL K + + P+Y+ PE ++
Sbjct: 124 ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYI-----APEVILGQGH 178
Query: 205 ------YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG--QFTDDDGT--EL 254
+S G +L + L G IPP H + + + L G ++ +D E
Sbjct: 179 SKTVDWWSLGCILYEFLVG--IPPFH------GETPEEIFQNILNGKIEWPEDVEVSDEA 230
Query: 255 VRLASRCLQYEPRERPNPKS 274
+ L S+ L +P +R KS
Sbjct: 231 IDLISKLLVPDPEKRLGAKS 250
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 8e-05
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
GDE +V E++ L + H + + A V L + +AL Y ++G ++ D+ +
Sbjct: 91 GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT---VCLSVLRALSYLHNQG-VIHRDIKS 146
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL DG +LS FG +L TP PE + E I+S G
Sbjct: 147 DSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGI 206
Query: 210 LLLDLLSGK----HIPPSHALDLIRD 231
++++++ G+ + PP A+ IRD
Sbjct: 207 MVIEMIDGEPPYFNEPPLQAMRRIRD 232
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 128 RVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 184
R + AQ LE+ + R +Y DL +L D DGN R+S GL +DG+S +
Sbjct: 98 RACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKG 156
Query: 185 LAFTP----PEYLRTGRVTPESVIY-SFGTLLLDLLSGK 218
A TP PE L+ G SV Y + G L ++++ +
Sbjct: 157 YAGTPGFMAPELLQ-GEEYDFSVDYFALGVTLYEMIAAR 194
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 1e-04
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 32/246 (13%)
Query: 52 RIAVKRFNRMAWPDPRQFL-EEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEYMPNETL 109
++AVK A R+ L E + + L N+ + NLLG C G L++ EY L
Sbjct: 67 KVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDL 126
Query: 110 AKHLFHWETHPMKWAMRLRVVLH----LAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 165
L + + L +L +A+ + + SK ++ DL A +L +
Sbjct: 127 LNFL-RRKRESF---LTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVK 181
Query: 166 LSTFGLMKNSRDGKSY-STNLAFTP-----PEYLRTGRVTPESVIYSFGTLLLDLLS-GK 218
+ FGL ++ + +Y A P PE + T ES ++S+G LL ++ S G
Sbjct: 182 ICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS 241
Query: 219 HIPPSHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 273
+ P +D LI++ +M + + + ++++ C +P +RP K
Sbjct: 242 NPYPGMPVDSKFYKLIKE-GYRMA-----QPEHAPAEIYDIMK---TCWDADPLKRPTFK 292
Query: 274 SLVTAL 279
+V +
Sbjct: 293 QIVQLI 298
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 2e-04
Identities = 55/193 (28%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 37 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
K+ VY KL + +F + D F EE R + N+ L C + D+
Sbjct: 65 KSSQKVYAMKL-------LSKFEMIKRSDSAFFWEE-RDIMAFANSPWVVQLFCAFQDDK 116
Query: 97 RL-LVAEYMPNETLAKHLFHWETHPMKWA--MRLRVVLHLAQALEYCTSKGRALYHDLNA 153
L +V EYMP L + +++ P KWA VVL AL+ S G ++ D+
Sbjct: 117 YLYMVMEYMPGGDLVNLMSNYDV-PEKWAKFYTAEVVL----ALDAIHSMG-LIHRDVKP 170
Query: 154 YRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAFTP----PEYLRT----GRVTPESVI 204
+L D+ G+ +L+ FG MK G TP PE L++ G E
Sbjct: 171 DNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDW 230
Query: 205 YSFGTLLLDLLSG 217
+S G L ++L G
Sbjct: 231 WSVGVFLFEMLVG 243
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 2e-04
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Query: 94 GDERLLVAEYMPN---ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHD 150
D LV EY+ +L K L P WA + + + +E +G ++ D
Sbjct: 69 KDYLYLVMEYLNGGDCASLIKTLGGL---PEDWAKQY--IAEVVLGVEDLHQRG-IIHRD 122
Query: 151 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 210
+ +L D+ G+ +L+ FGL +N + K + + PE + S +S G +
Sbjct: 123 IKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCV 182
Query: 211 LLDLLSGKHIPPSHA 225
+ + L G PP HA
Sbjct: 183 IFEFLFG--YPPFHA 195
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 21/253 (8%)
Query: 35 GEKAPNVVYKGKLENQ--RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC 92
GE A VYK + + +A+K+ R+ + + E + ++ + +
Sbjct: 28 GEGASGEVYKAT-DRATGKEVAIKKM-RLRKQNKELIINEILIMKDCKHPNIVDYYDSYL 85
Query: 93 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 152
GDE +V EYM +L + M V + Q LEY S+ ++ D+
Sbjct: 86 VGDELWVVMEYMDGGSLTDIITQNFV-RMNEPQIAYVCREVLQGLEYLHSQNV-IHRDIK 143
Query: 153 AYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFG 208
+ IL +DG+ +L+ FG KS ++ TP PE ++ P+ I+S G
Sbjct: 144 SDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLG 203
Query: 209 TLLLDLLSGK--HI--PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 264
+ +++ G+ ++ PP AL LI + + L + + E ++CL
Sbjct: 204 IMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNP-------EKWSPEFKDFLNKCLVK 256
Query: 265 EPRERPNPKSLVT 277
+P +RP+ + L+
Sbjct: 257 DPEKRPSAEELLQ 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 67 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHL--FHWETHPMKWA 124
+Q +E + +L++ + LG E D + E +P +LAK L + P+
Sbjct: 47 KQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVI-R 105
Query: 125 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS---RDGKSY 181
+ R +L LEY + ++ D+ IL D +G +L+ FG+ K KS+
Sbjct: 106 LYTRQIL---LGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSF 161
Query: 182 STNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-------RDRN 233
+ + PE + + G + I+S G +L++ +GK PP L+ + R +
Sbjct: 162 KGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK--PPWSQLEGVAAVFKIGRSKE 219
Query: 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
L + D D+ + + CLQ +P RP L
Sbjct: 220 LPPIPDH------LSDEAKDFILK---CLQRDPSLRPTAAEL 252
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 2e-04
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 19/243 (7%)
Query: 42 VYKGKLEN--QRRIAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERL 98
V+KG ++N Q+ +A+K + D + +++ +V Q + +T G +G +
Sbjct: 20 VFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLW 78
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158
++ EY+ + L + A L+ +L + L+Y S+ + ++ D+ A +L
Sbjct: 79 IIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSE-KKIHRDIKAANVLL 134
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 214
E G+ +L+ FG+ D + TP PE ++ ++ I+S G ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL 194
Query: 215 LSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 273
G+ PP+ + +R + L G+F+ CL +P RP K
Sbjct: 195 AKGE--PPNSDMHPMRVLFLIPKNNPPTLTGEFSKP----FKEFIDACLNKDPSFRPTAK 248
Query: 274 SLV 276
L+
Sbjct: 249 ELL 251
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 42.4 bits (99), Expect = 3e-04
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 53 IAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 111
+A+K N P +F++EA + + + L LLG C + LV + MP+ L
Sbjct: 39 VAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLD 97
Query: 112 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171
++ H + + L + +A+ + Y + R ++ DL A +L + +++ FGL
Sbjct: 98 YV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGL 155
Query: 172 MK-NSRDGKSYSTNLAFTPPEYL-----RTGRVTPESVIYSFGTLLLDLLS 216
+ D K Y+ + P +++ + T +S ++S+G + +L++
Sbjct: 156 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 3e-04
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 22/245 (8%)
Query: 41 VVYKG-KLENQRRIAVKRFNRMAWPDPRQFLE-EARSVGQLRNNRLTNLLGCCCEGDERL 98
VYK + +A+K + D + ++ E + + Q R+ +T G +G +
Sbjct: 16 EVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLW 75
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158
++ EY + L + A LR VL LEY +G+ ++ D+ A IL
Sbjct: 76 IIMEYCGGGSCLDLLKPGKLDETYIAFILREVLL---GLEYLHEEGK-IHRDIKAANILL 131
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 214
E+G+ +L+ FG+ S TP PE ++ ++ I+S G ++L
Sbjct: 132 SEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIEL 191
Query: 215 LSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 270
G+ + P L LI N L + +F+ + V L CL +P+ERP
Sbjct: 192 AKGEPPLSDLHPMRVLFLIPKNNPPSLEGN----KFSKP-FKDFVSL---CLNKDPKERP 243
Query: 271 NPKSL 275
+ K L
Sbjct: 244 SAKEL 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 42.3 bits (99), Expect = 3e-04
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 15/237 (6%)
Query: 37 KAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
+A +Y K ++RI ++ MA + +Q LE+ N+R L E +
Sbjct: 22 RATGKMYACKKLEKKRIKKRKGESMAL-NEKQILEKV-------NSRFVVSLAYAYETKD 73
Query: 97 RL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155
L LV M L H++H + + + LE + R +Y DL
Sbjct: 74 ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED-LHQERIVYRDLKPEN 132
Query: 156 ILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLL 212
IL D+ G+ R+S GL + +G K + + PE ++ R T ++ G LL
Sbjct: 133 ILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 192
Query: 213 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
++++G+ P I+ ++ L E ++++ + L L +P+ER
Sbjct: 193 EMIAGQS-PFQQRKKKIKREEVERLVKEVQE-EYSEKFSPDARSLCKMLLCKDPKER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 28/120 (23%)
Query: 136 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT 195
ALEY SK +Y DL IL D++G+ +L+ FG K RD ++++ L T PEYL
Sbjct: 113 ALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT-PEYL-- 165
Query: 196 GRVTPESV----------IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245
PE + ++ G L+ ++L G PP D N + + L G+
Sbjct: 166 ---APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYEKILAGK 214
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 128 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 185
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDSCLEG 244
++ PE L+ + +S I+S G L+++ G++ IPP A + L+++ +EG
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDA------KELELMFGCPVEG 220
Query: 245 QFTDDDGTELVRLASRCL-QYEPRERP 270
+ + + R R L Y P RP
Sbjct: 221 DPAESETSPRPRPPGRPLSSYGPDSRP 247
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 136 ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE 191
L++ KG +Y DL +L D+DG+ +++ FG+ K + +G+ ++ TP PE
Sbjct: 108 GLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPE 166
Query: 192 YLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALD 227
L+ G+ ESV +SFG LL ++L G+ P H D
Sbjct: 167 ILK-GQKYNESVDWWSFGVLLYEMLIGQ--SPFHGED 200
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 16/146 (10%)
Query: 84 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEY 139
LT L C D V EY+ L + E H + +A + + L
Sbjct: 63 LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLH---- 118
Query: 140 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDG---KSYSTNLAFTPPEYLRT 195
SKG +Y DL ++ D +G+ +++ FG+ K N DG K++ + PE +
Sbjct: 119 --SKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAY 175
Query: 196 GRVTPESVIYSFGTLLLDLLSGKHIP 221
++FG LL ++L+G P
Sbjct: 176 QPYGKSVDWWAFGVLLYEMLAG-QAP 200
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 7e-04
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 128 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTN 184
R+ + + + L Y S + L+ D+ +L + G +L FG+ + NS K+Y
Sbjct: 99 RIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-AKTYVGT 156
Query: 185 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-----------HIPPSHALDLIRDRN 233
A+ PE + + S ++S G ++L G+ + P L I D +
Sbjct: 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED 216
Query: 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
+L GQF++ + V ++C++ +P+ERP P++L+
Sbjct: 217 PPVLPV----GQFSE----KFVHFITQCMRKQPKERPAPENLM 251
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 8e-04
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 133 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 189
+A AL Y S +Y DL IL D G+ L+ FGL K + ++ TP
Sbjct: 105 IASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYL 163
Query: 190 -PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 227
PE LR + G +L ++L G +PP ++ D
Sbjct: 164 APEVLRKQPYDRTVDWWCLGAVLYEMLYG--LPPFYSRD 200
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 135 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNLAFTPPEY 192
+ L Y K + ++ D+ IL + G +L FG+ + K++ ++ PE
Sbjct: 111 KGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPER 170
Query: 193 LRTGRVTPESVIYSFGTLLLDLLSGK------HIPPSHALDLIRDRNLQMLTDSCLEGQF 246
++ + +S I+S G L++L +G+ + PP +L+ + G+F
Sbjct: 171 IQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL-QYIVNEPPPRLPSGKF 229
Query: 247 TDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ D + CL +PRERP+ K L
Sbjct: 230 SPD----FQDFVNLCLIKDPRERPSYKEL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 48/216 (22%), Positives = 91/216 (42%), Gaps = 15/216 (6%)
Query: 71 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVV 130
+E R + +L + + +LG CE L E+M +++ HL + K A+ +
Sbjct: 52 KEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVS-HLLS-KYGAFKEAVIINYT 109
Query: 131 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP-RLSTFGLM-----KNSRDGK---SY 181
L + L Y + ++ D+ +L D G R++ FG K + G+
Sbjct: 110 EQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQL 168
Query: 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241
+AF PE LR + ++S G +++++ + K PP +A L S
Sbjct: 169 LGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK--PPWNAEKHSNHLALIFKIASA 226
Query: 242 LEGQFTDDDGTELVR-LASRCLQYEPRERPNPKSLV 276
+ + +R + RCL+ +P +RP + L+
Sbjct: 227 TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 135 QALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FT 188
+ L Y SKG L+ DL A +L D DG ++S FG+ K S D N++ +
Sbjct: 119 EGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWM 177
Query: 189 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGK 218
PE + + + + I+S G ++L++ +G+
Sbjct: 178 APEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR 209
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 99 LVAEYMPNE---TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155
LV EYM ++ L L H+ +K M+ L + L YC K L+ D+
Sbjct: 93 LVFEYMDHDLMGLLESGLVHFSEDHIKSFMK-----QLLEGLNYCHKKN-FLHRDIKCSN 146
Query: 156 ILFDEDGNPRLSTFGLMK--NSRDGKSYSTN----LAFTPPEYLR-TGRVTPESVIYSFG 208
IL + G +L+ FGL + NS + + Y TN L + PPE L R P ++S G
Sbjct: 147 ILLNNKGQIKLADFGLARLYNSEESRPY-TNKVITLWYRPPELLLGEERYGPAIDVWSCG 205
Query: 209 TLLLDLLSGKHI 220
+L +L + K I
Sbjct: 206 CILGELFTKKPI 217
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 44/211 (20%), Positives = 75/211 (35%), Gaps = 54/211 (25%)
Query: 95 DERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSKGRALYH- 149
+E L V EY PN L +++ + + K + A+ ALEY SKG + H
Sbjct: 74 EENLYFVLEYAPNGELLQYIRKYGSLDEKCT-----RFYAAEILLALEYLHSKG--IIHR 126
Query: 150 DLNAYRILFDEDGNPRLSTFG--------LMKNSRDGKSYSTNLA--------------- 186
DL IL D+D + +++ FG S G + + +
Sbjct: 127 DLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA 186
Query: 187 -FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------LDLIRDRNLQMLTD 239
+ PE L S +++ G ++ +L+GK PP I
Sbjct: 187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK--PPFRGSNEYLTFQKILKLEYSFP-- 242
Query: 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERP 270
D +L+ + L +P++R
Sbjct: 243 -----PNFPPDAKDLIE---KLLVLDPQDRL 265
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 60/250 (24%), Positives = 96/250 (38%), Gaps = 33/250 (13%)
Query: 42 VYKG-KLENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC---CEGD 95
VY L+ +AVK R DP+ E A + L + NL+ +
Sbjct: 16 VYTAVNLDTGELMAVKEIRIQD---NDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE 72
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155
+ + EY TL + L H + L L + L Y S G ++ D+
Sbjct: 73 KVYIFMEYCSGGTLEELLEHGRILDEH--VIRVYTLQLLEGLAYLHSHG-IVHRDIKPAN 129
Query: 156 ILFDEDGNPRLSTFG----LMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPE--SV-I 204
I D +G +L FG L N+ +LA TP PE + G+ + I
Sbjct: 130 IFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI 189
Query: 205 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL----VRLASR 260
+S G ++L++ +GK P LD Q++ + D +L R
Sbjct: 190 WSLGCVVLEMATGK--RPWSELD----NEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDR 243
Query: 261 CLQYEPRERP 270
CL+ +P++RP
Sbjct: 244 CLESDPKKRP 253
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.002
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 67 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH--PMKWA 124
R FL EA +GQ + + +L G + +++ E+M N L L + ++
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLV 109
Query: 125 MRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS---Y 181
LR +A ++Y S+ ++ DL A IL + + ++S FGL + D S Y
Sbjct: 110 GMLR---GIAAGMKY-LSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 165
Query: 182 STNLA------FTPPEYLRTGRVTPESVIYSFGTLLLDLLS 216
+++L +T PE + + T S ++S+G ++ +++S
Sbjct: 166 TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.002
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 128 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSYSTNL 185
+V + + + L Y K + ++ D+ IL + G +L FG+ D S+
Sbjct: 107 KVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 166
Query: 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDL 228
++ PE L+ + +S I+S G L++L G++ IPP A +L
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL 210
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 84 LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRL---RVVLHLAQ---A 136
LT L C + +RL V EY+ L +FH ++ + R R + A+
Sbjct: 58 LTQLH-SCFQTKDRLFFVMEYVNGGDL---MFH-----IQRSGRFDEPRARFYAAEIVLG 108
Query: 137 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAFTP----PE 191
L++ +G +Y DL +L D +G+ +++ FG+ K G + ST TP PE
Sbjct: 109 LQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST-FCGTPDYIAPE 166
Query: 192 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 227
L P ++ G LL ++L+G+ P D
Sbjct: 167 ILSYQPYGPAVDWWALGVLLYEMLAGQ--SPFEGDD 200
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.003
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 88 LGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 146
L C + RL LV EY+ L H+ P + A R + AL + +G
Sbjct: 61 LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHA-RFYAA-EICIALNFLHERG-I 117
Query: 147 LYHDLNAYRILFDEDGNPRLSTFGLMKNS-RDGKSYSTNLA---FTPPEYLRTGRVTPES 202
+Y DL +L D DG+ +L+ +G+ K G + ST + PE LR
Sbjct: 118 IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSV 177
Query: 203 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 242
++ G L+ ++++G+ D+I D N M T+ L
Sbjct: 178 DWWALGVLMFEMMAGR-----SPFDIITD-NPDMNTEDYL 211
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.003
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 129 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTNLAF 187
V + +AL + S + ++ DL A IL DG+ +L+ FG+ KN + T +
Sbjct: 108 VCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIG- 165
Query: 188 TP----PEYL--RTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIR 230
TP PE + T + P ++ I+S G L++L + PP H L+ +R
Sbjct: 166 TPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQME--PPHHELNPMR 215
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.003
Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 16/197 (8%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
+VY + L Q RIA+K + EE L++ + LG E +
Sbjct: 23 IVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALE---YCTSKGRALYHDLNAYRI 156
E +P +L+ L + P+K ++ + Q LE Y + ++ D+ +
Sbjct: 83 FMEQVPGGSLSA-LLRSKWGPLK-DNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNV 139
Query: 157 LFDE-DGNPRLSTFGLMKN----SRDGKSYSTNLAFTPPEYLRTGR--VTPESVIYSFGT 209
L + G ++S FG K + ++++ L + PE + G + I+S G
Sbjct: 140 LVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGC 199
Query: 210 LLLDLLSGKHIPPSHAL 226
++++ +GK PP L
Sbjct: 200 TIVEMATGK--PPFIEL 214
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 38.8 bits (90), Expect = 0.003
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 127 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 186
+R ++ +A +EY +SK ++ DL A + +E+ ++ FGL K G Y A
Sbjct: 116 VRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCA 174
Query: 187 FTPP------EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------LIRDRNL 234
P E L T S +++FG + ++++ P + + LI+ L
Sbjct: 175 SKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL 234
Query: 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
+ D CLE ++ L +C EP+ RP+ + L L
Sbjct: 235 KQPPD-CLE---------DVYELMCQCWSPEPKCRPSFQHLRDQL 269
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 46/207 (22%), Positives = 79/207 (38%), Gaps = 11/207 (5%)
Query: 67 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 126
R L E R + +L + L NL + + LV + + L HL + ++
Sbjct: 45 RNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEE-QVK 103
Query: 127 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYST 183
+ + ALEY SKG ++ D+ IL DE G+ ++ F + S S
Sbjct: 104 FWIC-EIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSG 161
Query: 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-RNLQMLTDSCL 242
+ PE L + +S G + L GK H+ + R Q D
Sbjct: 162 TPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV-- 219
Query: 243 EGQFTDDDGTELVRLASRCLQYEPRER 269
+ TE + ++ L+ +P++R
Sbjct: 220 --LYPATWSTEAIDAINKLLERDPQKR 244
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.004
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 12/147 (8%)
Query: 129 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 188
++ + AL+Y G ++ D+ A IL GN +L FG+ S + T
Sbjct: 106 IIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGT 164
Query: 189 P----PEYLRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 243
P PE + G+ I+S G + ++ +G PP +D R ML
Sbjct: 165 PYWMAPEVITEGKYYDTKADIWSLGITIYEMATGN--PPYSDVDAFR---AMMLIPKSKP 219
Query: 244 GQFTDDDGTELVR-LASRCLQYEPRER 269
+ D+ ++L+R + CL EP+ER
Sbjct: 220 PRLEDNGYSKLLREFVAACLDEEPKER 246
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 38.9 bits (90), Expect = 0.004
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 70 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRV 129
L E+R + R+ LT+L D V EY+ L FH + R R
Sbjct: 43 LTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL---FFHLSRERVFSEDRTRF 99
Query: 130 V-LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK----NSRDGKSYSTN 184
+ AL+Y S G+ +Y DL ++ D+DG+ +++ FGL K ++ K++
Sbjct: 100 YGAEIVSALDYLHS-GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158
Query: 185 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 218
+ PE L + G ++ +++ G+
Sbjct: 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.004
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 34/173 (19%)
Query: 131 LHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPP 190
+A+ +E+ S+ + ++ DL A IL E+ ++ FGL +RD + P
Sbjct: 180 FQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGL---ARD--------IYKDP 227
Query: 191 EYLRTGR-------VTPESV----------IYSFGTLLLDLLS-GKHIPPSHALDLIRDR 232
+Y+R G + PES+ ++SFG LL ++ S G P +D R
Sbjct: 228 DYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR 287
Query: 233 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285
L+ T T E+ + C P +RP LV L L +E
Sbjct: 288 RLKEGTRMRAPEYATP----EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 460 | |||
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.98 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.97 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.97 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.97 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.96 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.96 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.95 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.94 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.93 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.91 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.91 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.91 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.9 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.89 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.87 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.87 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.86 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.86 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.85 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.85 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.83 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.83 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.82 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.81 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.79 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.79 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.78 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.77 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.76 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.76 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.73 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.72 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.72 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.7 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.69 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.66 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.64 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.63 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.6 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.6 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.59 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.59 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.57 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.57 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.56 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.55 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.55 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.52 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.5 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.49 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.49 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.49 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.48 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.48 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.46 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.44 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.42 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.4 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.38 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.38 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.38 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.37 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.37 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.35 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.34 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.34 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.33 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.33 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.32 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.31 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.31 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.3 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.3 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.29 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.29 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.29 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.28 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.27 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.27 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.27 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.24 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.24 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.23 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.22 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.21 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.2 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.2 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.18 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.17 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.16 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.16 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.16 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.15 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 99.15 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.15 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 99.14 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.13 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.13 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.12 |
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-53 Score=383.61 Aligned_cols=244 Identities=19% Similarity=0.273 Sum_probs=210.5
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCe-eEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-RLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~lv~e 102 (460)
++.+.++.||+|+.|+||++.+ .+++.+|+|++....... .+++.+|+++++.++||+||.+||.|..++. +.|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 4667789999999999999995 468999999996554333 6789999999999999999999999999984 999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--C
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--~ 179 (460)
||+||||++++.. .+.+++...-+|+.+|++||.|||. .+ ||||||||+|||++..|.+||||||.++..... .
T Consensus 159 YMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~-IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~ 235 (364)
T KOG0581|consen 159 YMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERK-IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIAN 235 (364)
T ss_pred hcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccC-eeeccCCHHHeeeccCCCEEeccccccHHhhhhhcc
Confidence 9999999999863 4779999999999999999999996 66 999999999999999999999999998866543 6
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCCh-----hhhhhhhccccccccccccCCCCch-hHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-----ALDLIRDRNLQMLTDSCLEGQFTDD-DGTE 253 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 253 (460)
++.||..|||||.+.+..|+.++||||||++++|+++|+.|++.. ..-.+.... .+ .+++.+|.. ++++
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~I----v~-~ppP~lP~~~fS~e 310 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAI----VD-EPPPRLPEGEFSPE 310 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHH----hc-CCCCCCCcccCCHH
Confidence 889999999999999999999999999999999999999888764 111111111 11 122345554 8899
Q ss_pred HHHHHHHHcccCCCCCCChhHHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++.|+..||++||.+|||+.++++
T Consensus 311 f~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 311 FRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhc
Confidence 999999999999999999999997
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-51 Score=390.74 Aligned_cols=273 Identities=36% Similarity=0.641 Sum_probs=232.6
Q ss_pred CccccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceee
Q 012608 9 SFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 88 (460)
Q Consensus 9 ~~~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 88 (460)
+.+.|++.||.++|+||+..+++ |+|+||.||+|.+.+|+.||||++.........+|.+|+.++.+++|||+|+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 68899999999999999998877 999999999999989999999988776544145699999999999999999999
Q ss_pred eEEeeCC-eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccccCCcEEEcCCCCeE
Q 012608 89 GCCCEGD-ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDEDGNPR 165 (460)
Q Consensus 89 ~~~~~~~-~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~iiH~Dikp~Nill~~~~~~k 165 (460)
|||.+.+ ..+||+|||++|||.+++......+++|..+++|+.+++.||+|||... +||||||||+|||+|+++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999988 5999999999999999998643338999999999999999999999966 599999999999999999999
Q ss_pred EccCCCcccCCC-CCCc----cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChh-----------hhhh
Q 012608 166 LSTFGLMKNSRD-GKSY----STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-----------LDLI 229 (460)
Q Consensus 166 l~DFg~a~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~-----------~~~~ 229 (460)
|+|||+++.... .... .||.+|++||.+..+..+.++||||||++++||+||+.+..... ...+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999977654 3322 78999999999998999999999999999999999997654321 1123
Q ss_pred hhcccccccccccc-CCCCc-hhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 230 RDRNLQMLTDSCLE-GQFTD-DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 230 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.......+.++.+. ..++. ..-..+..+..+|++.+|..||+|.+|++.|+.+..
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 33355666666655 44443 355668999999999999999999999999965543
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-50 Score=367.08 Aligned_cols=248 Identities=19% Similarity=0.261 Sum_probs=208.6
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
...+|.+.++||+|+|++||+|++ .++..||||.+.... ....+.+..|+.+|+.++|||||.+++++..++.+|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 456788899999999999999994 568999999997663 33367789999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC------CCeEEccCCCccc
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED------GNPRLSTFGLMKN 174 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~------~~~kl~DFg~a~~ 174 (460)
||||.||+|.++++. .+.+++..++.++.||+.||++||+++ ||||||||+||||+.. -.+||+|||+|+.
T Consensus 88 MEyC~gGDLs~yi~~--~~~l~e~t~r~Fm~QLA~alq~L~~~~-IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~ 164 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRR--RGRLPEATARHFMQQLASALQFLHENN-IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF 164 (429)
T ss_pred EEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence 999999999999984 458999999999999999999999999 9999999999999754 4589999999998
Q ss_pred CCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 175 SRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 175 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
.... .+.+|++.|||||++....|+.|+|+||+|+++|++++|+.||.......+....... ......++...+
T Consensus 165 L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~---~~~~~~~~~~~s 241 (429)
T KOG0595|consen 165 LQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG---NEIVPVLPAELS 241 (429)
T ss_pred CCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc---ccccCchhhhcc
Confidence 7765 4778999999999999999999999999999999999999999877665554422111 111122334445
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+.+++...++.+|.+|.+..+...
T Consensus 242 ~~~~~Ll~~ll~~~~~~~~~~~~~~~ 267 (429)
T KOG0595|consen 242 NPLRELLISLLQRNPKDRISFEDFFD 267 (429)
T ss_pred CchhhhhhHHHhcCccccCchHHhhh
Confidence 56678888888899888877666554
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-52 Score=357.26 Aligned_cols=249 Identities=20% Similarity=0.280 Sum_probs=212.5
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeee-EEeeCCe-eEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLG-CCCEGDE-RLLV 100 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~-~~lv 100 (460)
.+|+|+++||.|+||+||++. +.+|..||.|.++-...+. ...+..|+.+|++|+|||||++++ .+..++. ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 459999999999999999999 7789999999998544333 457999999999999999999998 4555555 8899
Q ss_pred EEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 101 AEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
||+|.+|+|.+++++. ..+.+++..+|+++.|+|.||..+|++ +.|+||||||.||+++.+|.+||+|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999999753 346799999999999999999999993 34999999999999999999999999999987
Q ss_pred CCC----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC-chh
Q 012608 176 RDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-DDD 250 (460)
Q Consensus 176 ~~~----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 250 (460)
... .+++|||.||+||.+.+.+|+.+|||||+||++|||+.-++||.+.....+..+..+.-.. .+| .-.
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~-----~~p~~~Y 253 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYP-----PLPDEHY 253 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCC-----CCcHHHh
Confidence 765 4678999999999999999999999999999999999999999998766665554444221 123 456
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHHHh
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~~L 279 (460)
+.++..||..|+..||..||+.-.++..+
T Consensus 254 S~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 254 STDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred hhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 78999999999999999999865555443
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-50 Score=377.51 Aligned_cols=259 Identities=27% Similarity=0.398 Sum_probs=217.6
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCC-eeEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD-ERLLV 100 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv 100 (460)
++....+...+|.|+||+||+|.+.....||||++....... .+.|.+|+.+|.+++|||||+++|+|.... ..++|
T Consensus 39 ~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 39 DPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred ChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEE
Confidence 344455666799999999999998544449999998765443 458999999999999999999999998887 79999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-CeEEccCCCcccCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD-- 177 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~DFg~a~~~~~-- 177 (460)
|||+++|+|.+++.......+++..+.+|+.||+.||.|||++++||||||||+|||++.++ ++||+|||+++....
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 99999999999997644678999999999999999999999998789999999999999997 999999999976543
Q ss_pred --CCCccCCCcccCccccc--cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 178 --GKSYSTNLAFTPPEYLR--TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 178 --~~~~~~t~~y~aPE~~~--~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
.....||..|||||++. ...++.|+||||||+++|||+||+.||............... .....++..+++.
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~----~~Rp~~p~~~~~~ 274 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG----GLRPPIPKECPPH 274 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc----CCCCCCCccCCHH
Confidence 23468899999999999 568999999999999999999999999776542222222211 2223345557899
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
+..++.+||..||..||++.+++..|+.+....
T Consensus 275 l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 275 LSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred HHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999887644
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-51 Score=368.82 Aligned_cols=266 Identities=20% Similarity=0.274 Sum_probs=215.2
Q ss_pred CCCccccCHHHHHHH-----hc-CCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC-------CHHHHHHH
Q 012608 7 LPSFREFTLEQLKNA-----TS-GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-------DPRQFLEE 72 (460)
Q Consensus 7 ~~~~~~~~~~~~~~~-----~~-~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~E 72 (460)
+|....|.++++... .. -++.|-+.+.||+|+||.|-+|. ..+|+.||||+++..... ......+|
T Consensus 147 ~p~~~~~v~~~~s~d~~~~~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~E 226 (475)
T KOG0615|consen 147 IPALKIFVFEDLSRDSSKVPPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNE 226 (475)
T ss_pred cchhheeeeecccchhccCccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHH
Confidence 455555555554221 12 23447788999999999999998 667999999999754321 12346799
Q ss_pred HHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccc
Q 012608 73 ARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 152 (460)
Q Consensus 73 ~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dik 152 (460)
+++|++|+|||||+++++++..+..||||||+.||.|.+++. .++.+.++.-.-+++|++.|+.|||+.| |+|||||
T Consensus 227 ieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~G-I~HRDiK 303 (475)
T KOG0615|consen 227 IEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQG-IIHRDIK 303 (475)
T ss_pred HHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcC-cccccCC
Confidence 999999999999999999999999999999999999999997 4667888889999999999999999999 9999999
Q ss_pred CCcEEEcCC---CCeEEccCCCcccCCCC---CCccCCCcccCccccccCC--CC-CCCceehHHHHHHHHhhCCCCCCC
Q 012608 153 AYRILFDED---GNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR--VT-PESVIYSFGTLLLDLLSGKHIPPS 223 (460)
Q Consensus 153 p~Nill~~~---~~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~--~~-~~sDi~slG~~l~el~tg~~p~~~ 223 (460)
|+|||+..+ ..+||+|||+|+..+.. .+.+||+.|.|||++.+.. ++ .+.|+||+||+||-+++|.+||.+
T Consensus 304 PeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~ 383 (475)
T KOG0615|consen 304 PENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSE 383 (475)
T ss_pred cceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccc
Confidence 999999755 77999999999987654 5789999999999998755 33 388999999999999999999977
Q ss_pred hhhhh-hhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 224 HALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 224 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+..+. ..+.....-- ...+.....++.+..++|.+||..||++|||+.++++
T Consensus 384 ~~~~~sl~eQI~~G~y--~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 384 EYTDPSLKEQILKGRY--AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred ccCCccHHHHHhcCcc--cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 65443 2222211111 1122344568899999999999999999999999998
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-50 Score=379.63 Aligned_cols=243 Identities=18% Similarity=0.226 Sum_probs=218.2
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
..|...+.||+|||+.||.++. .+|..||+|++.... ....+...+||+|.++|+|||||+++++|++.+.+|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 6689999999999999999995 889999999996633 234678999999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
|+|+.++|..+++ ..+++++.+++.+++||+.||.|||+.+ |||||||..|++++++.++||+|||+|......
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~-IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLG-IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcC-ceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 9999999999887 5688999999999999999999999999 999999999999999999999999999877633
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
.+.+||+.|.|||++.....+..+||||+|||+|-|++|++||............... .-.+|..++.+..++
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~------~Y~~P~~ls~~A~dL 248 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN------EYSMPSHLSAEAKDL 248 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc------CcccccccCHHHHHH
Confidence 5789999999999999888999999999999999999999999887666555443221 123566788999999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
|.++|+.||.+|||+++|+.
T Consensus 249 I~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHhcCCcccCCCHHHHhc
Confidence 99999999999999999997
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-49 Score=373.48 Aligned_cols=252 Identities=27% Similarity=0.407 Sum_probs=215.9
Q ss_pred ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
..+++++||+|-||.||.|.+.....||+|.++... ...+.|.+|+++|++|+|+|||+++++|..++.++||||||+.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 356789999999999999999777799999998764 3467899999999999999999999999998899999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC-----c
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-----Y 181 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~-----~ 181 (460)
|+|.++++...+..+.....+.++.|||.|++||++++ +|||||.++|||++++..+||+|||+++...+..- .
T Consensus 286 GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~-~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~ 364 (468)
T KOG0197|consen 286 GSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN-YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGG 364 (468)
T ss_pred CcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC-ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCC
Confidence 99999998767788999999999999999999999999 99999999999999999999999999995544321 1
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
.-++.|+|||.+..+.++.+||||||||+||||+| |+.|+++............ ..+-..|..+|+++.+++..
T Consensus 365 kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~-----GyRlp~P~~CP~~vY~lM~~ 439 (468)
T KOG0197|consen 365 KFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLER-----GYRLPRPEGCPDEVYELMKS 439 (468)
T ss_pred CCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhc-----cCcCCCCCCCCHHHHHHHHH
Confidence 22578999999999999999999999999999999 5556555443333222211 12223466789999999999
Q ss_pred HcccCCCCCCChhHHHHHhcccccc
Q 012608 261 CLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
||..+|++|||++.+...|+.+...
T Consensus 440 CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 440 CWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred HhhCCcccCCCHHHHHHHHHHhhhc
Confidence 9999999999999999998887653
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-49 Score=342.19 Aligned_cols=249 Identities=20% Similarity=0.287 Sum_probs=203.4
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
..|+.++++|+|+||+||+++ ..+|+.||||++..+..+. .+-.++|+++|++|+|||+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 468899999999999999999 5569999999998765432 4567899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
||+. |+-+.+.+ ....++...+.+++.|++.|+.|+|+++ +|||||||+|||++.+|.+||||||+|+.....
T Consensus 82 ~~dh-TvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n-~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 82 YCDH-TVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNN-CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ecch-HHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcC-eecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 9995 44444544 3456889999999999999999999999 999999999999999999999999999977633
Q ss_pred CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh--------------------hhcccccc
Q 012608 179 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI--------------------RDRNLQML 237 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~--------------------~~~~~~~~ 237 (460)
+.+..|..|+|||.+.+ ..|+...|||++||++.||++|.+.|++.+.-.. .+..+..+
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 35677999999999987 5699999999999999999999998887632111 01111111
Q ss_pred ccc-----cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 TDS-----CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 ~~~-----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.-+ .+...--+..+.-+.+|+.+||..||.+|++.++++.
T Consensus 239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111 1111112345567899999999999999999999985
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-48 Score=349.76 Aligned_cols=241 Identities=22% Similarity=0.274 Sum_probs=212.4
Q ss_pred hcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
..+.+++++++.||+|+||.||+++ .++++.+|+|+++..... +.+....|..+|.+++||.||.++-.|...+.+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 4567789999999999999999999 556999999999765432 367889999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC-
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR- 176 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~- 176 (460)
|+|+||+.||.|..++. +.+.+++..+.-++.+|+.||.|||++| ||||||||+|||+|..|.++|+|||+++..-
T Consensus 101 ylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~g-IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKG-IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999999997 4678999999999999999999999999 9999999999999999999999999998543
Q ss_pred ---CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 177 ---DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 177 ---~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
...+++||+.|||||++.+..++..+|.||||+++|||++|.+||.......+........ ....+.-++.+
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ 252 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEE 252 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHH
Confidence 2356799999999999999999999999999999999999999998887666655544432 11234447789
Q ss_pred HHHHHHHHcccCCCCCC
Q 012608 254 LVRLASRCLQYEPRERP 270 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rp 270 (460)
.++++.++|+.||.+|.
T Consensus 253 ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 253 ARDLLKKLLKRDPRQRL 269 (357)
T ss_pred HHHHHHHHhccCHHHhc
Confidence 99999999999999995
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=328.52 Aligned_cols=257 Identities=22% Similarity=0.300 Sum_probs=212.4
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+.|..++++|+|.||+||+|+ ..+|+.||||+++.....+ .....+|+..|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 468889999999999999999 6789999999998765443 4578899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC---
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~--- 179 (460)
|++ .+|...+++ +...++...+..++.++++|++|||++. |+||||||+|+|++.+|.+||+|||+++.++...
T Consensus 82 fm~-tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~-IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 82 FMP-TDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW-ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred ecc-ccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh-hhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence 998 899998876 5678999999999999999999999999 9999999999999999999999999999877543
Q ss_pred -CccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc-----------------------c
Q 012608 180 -SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------------------L 234 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------------------~ 234 (460)
....|..|+|||.+.|.. |+...|+||.||++.||+-|.+.|++.+.-...... +
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 225688999999998754 899999999999999999999777765332111111 1
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
...+.+.. ..+.+.++.+..+++.+||..||.+|+|++|+++ .......+.
T Consensus 239 ~~~P~~~~-~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~--~~yf~~~P~ 289 (318)
T KOG0659|consen 239 QQFPKPPL-NNLFPAASSDALDLLSKMLTYNPKKRITASQALK--HPYFKSLPL 289 (318)
T ss_pred hcCCCCcc-ccccccccHHHHHHHHhhhccCchhcccHHHHhc--chhhhcCCC
Confidence 11111111 2234456678899999999999999999999998 455554333
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-48 Score=354.28 Aligned_cols=249 Identities=21% Similarity=0.337 Sum_probs=205.4
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCC--eeEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVA 101 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 101 (460)
-..+...+.||+|+||.||++.. ++|...|||.+........+.+.+|+.+|++|+|||||+++|...... .++++|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 34578889999999999999994 459999999987664333677999999999999999999999854444 688999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-CCCeEEccCCCcccCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRD--- 177 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~DFg~a~~~~~--- 177 (460)
||++||+|.+++....+ .+++..+..+++||+.||+|||++| |||+||||+|||++. ++.+||+|||+++....
T Consensus 96 Ey~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g-~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG-IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred eccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC-EeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 99999999999986544 8999999999999999999999999 999999999999999 79999999999886552
Q ss_pred ----CCCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 178 ----GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 178 ----~~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
.....||+.|||||++..+. ..+++|||||||++.||+||+.||... .. ............ ..+.+|..++.
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~-~~~~~~~ig~~~-~~P~ip~~ls~ 250 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FE-EAEALLLIGRED-SLPEIPDSLSD 250 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cc-hHHHHHHHhccC-CCCCCCcccCH
Confidence 23578999999999998543 446999999999999999999887652 00 000000111111 12266778899
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
+..+|+.+|+..+|..|||+.+++..
T Consensus 251 ~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 251 EAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 99999999999999999999999984
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-47 Score=351.07 Aligned_cols=255 Identities=22% Similarity=0.264 Sum_probs=207.8
Q ss_pred CCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 98 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 98 (460)
.-+.|+.+.+||+|.||.||+|+ ..+|+.||+|++.... .+...-..+||.||++|+||||+++.+..... +.+|
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 34568899999999999999999 7789999999998765 33467788999999999999999999998876 6899
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
||+|||+ -+|..++.. ..-.+++.++..+++|++.||+|||++| |+|||||.+|||||.+|.+||+|||+|+.+...
T Consensus 195 lVFeYMd-hDL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g-vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 195 LVFEYMD-HDLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG-VLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEEeccc-chhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC-eeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999998 688887753 3457999999999999999999999999 999999999999999999999999999966543
Q ss_pred -----CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc-----------c--ccccc
Q 012608 179 -----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------L--QMLTD 239 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~--~~~~~ 239 (460)
+..+.|..|+|||.+.|.. |+.+.|+||.|||+.||++|++++++...-.....+ . ..++.
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~ 351 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPH 351 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCc
Confidence 3445689999999999865 999999999999999999999888775322111100 0 01110
Q ss_pred ---cccc-------CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 240 ---SCLE-------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 240 ---~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
..+. .+....+++...+|+..+|..||.+|.|+.+++. ..++
T Consensus 352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~--seyF 403 (560)
T KOG0600|consen 352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ--SEYF 403 (560)
T ss_pred ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc--Cccc
Confidence 0000 1112345778999999999999999999999987 4444
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-47 Score=358.19 Aligned_cols=244 Identities=20% Similarity=0.332 Sum_probs=214.3
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..|....+||+|+.|.||.+. ..+++.||||.+........+-+..|+.+|+..+|+|||.+++.|..++.+|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 346677889999999999998 6679999999998887777888999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~ 180 (460)
+||+|.|.+. ...+++.++..|.++++.||+|||.+| |+|||||.+|||++.+|.+||+|||++..... ..+
T Consensus 353 ~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~g-IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 353 EGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARG-IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred CCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcc-eeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 9999999984 567999999999999999999999999 99999999999999999999999999876654 357
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh-hhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..||+.|||||+.....|+++.||||||++++||+-|.+||..+.. ..+. .......+.-..+..+++.+.+|+.
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly----LIa~ng~P~lk~~~klS~~~kdFL~ 504 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY----LIATNGTPKLKNPEKLSPELKDFLD 504 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHH----HHhhcCCCCcCCccccCHHHHHHHH
Confidence 8899999999999999999999999999999999999998864321 1111 1112223334556778999999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.|+.+|+++.++|+
T Consensus 505 ~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 505 RCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHhhcchhcCCCHHHHhc
Confidence 999999999999999998
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-46 Score=342.07 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=212.4
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.|-++|++..+||.|..++||+|+ ...+..||||++..+...+ .+.+.+|++.|+.++||||++++..|..+..+|+|
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 456889999999999999999999 6779999999998776655 58899999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|.||.+||+.++++..-...+.+..+..|++++++||.|||.+| .||||||+.||||+.+|.+||+|||.+..+...
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G-~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG-HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC-ceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999998765667999999999999999999999999 999999999999999999999999975432221
Q ss_pred ------CCccCCCcccCcccccc--CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh----hhccccccccccccCCC
Q 012608 179 ------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI----RDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 179 ------~~~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~ 246 (460)
..+.||+.|||||++.. ..|+.|+||||||++..||++|..||..-..-.. .++....+.......+-
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~ 261 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDE 261 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHH
Confidence 56689999999999643 3489999999999999999999999854322211 11111111112222223
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
....+..+.+++..||+.||.+|||++++++
T Consensus 262 ~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 262 DKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 3346678999999999999999999999986
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-47 Score=348.50 Aligned_cols=249 Identities=18% Similarity=0.267 Sum_probs=209.3
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCC-CCccceeeeEEeeCC-eeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLR-NNRLTNLLGCCCEGD-ERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~-~~~lv~ 101 (460)
.+|.++++||.|+||.||+|+ ..+|..||||+++.....- ...-+||+..|++|. ||||+++.+++.+.+ .+++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 479999999999999999999 7779999999998765432 334569999999997 999999999998887 899999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
|||+ .+|.++++++ +..+++..++.|+.||+.||+|+|.+| +.|||+||+|||+.....+||+|||+|+.....
T Consensus 90 E~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G-fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY 166 (538)
T KOG0661|consen 90 EFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG-FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY 166 (538)
T ss_pred Hhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC-cccccCChhheEecccceeEecccccccccccCCCc
Confidence 9998 8999999875 789999999999999999999999999 999999999999999889999999999976644
Q ss_pred CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhh--hh-----------------------hc
Q 012608 179 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--IR-----------------------DR 232 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~--~~-----------------------~~ 232 (460)
+.++.|..|+|||++.. +-|+.+.|+|++|||++|+.+-++.|++...-. ++ +.
T Consensus 167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf 246 (538)
T KOG0661|consen 167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF 246 (538)
T ss_pred chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence 56788999999999854 568999999999999999999999998753211 10 00
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 233 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
....... .....+.++.++++.++|.+|+.+||.+|||+.++++.
T Consensus 247 ~~P~~~~-~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 247 RFPQVKP-SPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CCCcCCC-CChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111111 11122334478999999999999999999999999984
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=350.96 Aligned_cols=251 Identities=21% Similarity=0.254 Sum_probs=214.4
Q ss_pred CCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCC----CC-CCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCe
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM----AW-PDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDE 96 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 96 (460)
....|.+.+.||+|+||.|+.|. ..+|+.||+|++... .. ...+.+.+|+.+++++. ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 45679999999999999999998 557899999987664 11 23456779999999998 9999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-CCeEEccCCCcccC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNS 175 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~DFg~a~~~ 175 (460)
+++||||+.||.|.+++.. .+++++..+..+++|++.|++|||++| |+||||||+|||++.+ +++||+|||++...
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g-i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG-IVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 9999999999999999974 678999999999999999999999999 9999999999999999 99999999999877
Q ss_pred C----CCCCccCCCcccCccccccCC-CC-CCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 176 R----DGKSYSTNLAFTPPEYLRTGR-VT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 176 ~----~~~~~~~t~~y~aPE~~~~~~-~~-~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
. ...+.+||+.|+|||++.+.. |+ .++||||+|++||.|++|..||.......+....... .-.+|..
T Consensus 172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~------~~~~p~~ 245 (370)
T KOG0583|consen 172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG------EFKIPSY 245 (370)
T ss_pred CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC------CccCCCC
Confidence 2 336789999999999999877 75 6999999999999999999999875544443332111 1134445
Q ss_pred h-HHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 250 D-GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 250 ~-~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+ ++++..++.+||..||.+|+|+.+++. .++...
T Consensus 246 ~~S~~~~~Li~~mL~~~P~~R~t~~~i~~--h~w~~~ 280 (370)
T KOG0583|consen 246 LLSPEARSLIEKMLVPDPSTRITLLEILE--HPWFQK 280 (370)
T ss_pred cCCHHHHHHHHHHcCCCcccCCCHHHHhh--Chhhcc
Confidence 5 899999999999999999999999993 555543
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-46 Score=351.04 Aligned_cols=248 Identities=19% Similarity=0.258 Sum_probs=216.1
Q ss_pred hcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCe
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 96 (460)
...-.++...+.||.|+|++|++|+ ..+++.+|||++.... ....+...+|-.+|.+| .||.|++++..|.++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3455678889999999999999999 6679999999986543 22345788999999999 89999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
+|+|+||++||.|.+++.+ -+.+++...+.++.||+.||+|||+.| ||||||||+|||+|++++++|+|||-|+.+.
T Consensus 149 LYFvLe~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~~G-IIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHSNG-IIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred eEEEEEecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 9999999999999999984 478999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC-----------------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccc
Q 012608 177 DG-----------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239 (460)
Q Consensus 177 ~~-----------------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 239 (460)
.. .+++||..|.+||++.+...++.+|||+|||++|+|+.|.+||.+.....+-.+....
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l--- 302 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL--- 302 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh---
Confidence 21 3478999999999999999999999999999999999999999877655444443322
Q ss_pred ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
.-.+++.+++.+.+|+.++|..||.+|+|+++|.+.
T Consensus 303 ---~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 303 ---DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ---cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 235677888999999999999999999999999873
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-46 Score=327.02 Aligned_cols=265 Identities=18% Similarity=0.242 Sum_probs=216.8
Q ss_pred HHHhcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeC-
Q 012608 19 KNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG- 94 (460)
Q Consensus 19 ~~~~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 94 (460)
...+++.+.|+++.+|++|+||+||+|+ ..+++.||+|+++...... .---++||.+|.+++|||||.+..+....
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 5677889999999999999999999999 5679999999998655332 34578999999999999999999998754
Q ss_pred -CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 95 -DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 95 -~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
+.+|||||||+ .+|..++... ..++...++..++.|+++|++|||... |+|||||++|+|+++.|.+||+|||+|+
T Consensus 149 ~d~iy~VMe~~E-hDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~w-ilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 149 MDKIYIVMEYVE-HDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNW-ILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred cceeeeeHHHHH-hhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhce-eEecccchhheeeccCCcEEecccchhh
Confidence 56999999998 7899988753 368999999999999999999999999 9999999999999999999999999999
Q ss_pred cCCCC----CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc--------------
Q 012608 174 NSRDG----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------- 234 (460)
Q Consensus 174 ~~~~~----~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------------- 234 (460)
.++.. .....|..|+|||.+.+.+ |+.+.|+||+|||+.||+++++.|++...-......+
T Consensus 226 ~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~ 305 (419)
T KOG0663|consen 226 EYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY 305 (419)
T ss_pred hhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence 88765 4456789999999998865 8999999999999999999999887764321111111
Q ss_pred -----------cccccccccCCCCch-hHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 235 -----------QMLTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 235 -----------~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
...+...+...++.. ++..-.+++..+|.+||.+|.|+.+.|+ ..++.+.+.
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~--h~~F~e~P~ 369 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK--HEYFRETPL 369 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc--ccccccCCC
Confidence 111111112223222 5577889999999999999999999998 666666433
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=351.27 Aligned_cols=246 Identities=17% Similarity=0.253 Sum_probs=218.9
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
+-...|++.+.||.|+.|.|-+|+ ..+|+.+|||++.... ......+.+|+-+|+.+.||||++++++++....+|
T Consensus 9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ly 88 (786)
T KOG0588|consen 9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLY 88 (786)
T ss_pred ccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEE
Confidence 345678999999999999999999 5689999999986542 122567899999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+|.||++||.|.+++. ..+++++.++.+++.||+.|+.|||..+ |+|||+||+|+|+|..+++||+|||+|..-..+
T Consensus 89 lvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~-icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 89 LVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFN-ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhc-ceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 9999999999999998 4678999999999999999999999999 999999999999999999999999999876655
Q ss_pred ---CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
.+.+|++.|.+||++.|.+| +.++||||.|||||.|+||+.||.++....+..+...... ++|.++++++
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f------~MPs~Is~ea 239 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF------EMPSNISSEA 239 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc------cCCCcCCHHH
Confidence 47899999999999999998 5699999999999999999999998776655554433322 3567888999
Q ss_pred HHHHHHHcccCCCCCCChhHHHH
Q 012608 255 VRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++|+.+||..||++|.|.++|++
T Consensus 240 QdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 240 QDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred HHHHHHHhccCccccccHHHHhh
Confidence 99999999999999999999998
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-46 Score=349.30 Aligned_cols=242 Identities=19% Similarity=0.263 Sum_probs=211.7
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.+|.+...||+|+||.||+|+ ..+.+.||+|.+.+..... .+.+.+|++|+++++||||+.+++.|+.....|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 357777888999999999999 5579999999987655433 5679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC---
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~--- 179 (460)
|+.| +|..++. ..+.++++.+..++.+++.||.|||+.+ |+|||+||.|||++..|.+|+||||+|+.+....
T Consensus 82 ~a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~r-ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl 157 (808)
T KOG0597|consen 82 YAVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNR-ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL 157 (808)
T ss_pred hhhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcC-cccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence 9985 9999997 4678999999999999999999999999 9999999999999999999999999999877653
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...||+.|||||...+++|+..+|+||+||++||+++|++||.......+-..+....+ ..|...+..+..|+
T Consensus 158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v------~~p~~~S~~f~nfl 231 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPV------KPPSTASSSFVNFL 231 (808)
T ss_pred eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCC------CCcccccHHHHHHH
Confidence 45799999999999999999999999999999999999999977655433333222211 23447789999999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
+.+|.+||..|.|..+++.
T Consensus 232 ~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 232 QGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHhhcChhhcccHHHHhc
Confidence 9999999999999999885
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-45 Score=342.13 Aligned_cols=238 Identities=20% Similarity=0.330 Sum_probs=207.3
Q ss_pred hcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHH
Q 012608 31 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 110 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~ 110 (460)
++.||+|+.|.||+|++ .++.||||+++... ..+|.-|++|+||||+.+.|+|.....+|||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 78899999999999998 46889999975433 36788999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC---CCCccCCCcc
Q 012608 111 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---GKSYSTNLAF 187 (460)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~---~~~~~~t~~y 187 (460)
..++ .+.+++......|..+|+.|+.|||.+. |||||||.-||||..+..+||+|||-++.... ...+.||..|
T Consensus 201 ~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hK-IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHK-IIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhh-HhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 9997 4678999999999999999999999998 99999999999999999999999998875543 3467899999
Q ss_pred cCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCC
Q 012608 188 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267 (460)
Q Consensus 188 ~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 267 (460)
||||++...+.+.|.||||||||||||+||..|+..-.. ..++..+....+.-..|..+|..|.-|+.+||.-.|.
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----sAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpR 353 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----SAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR 353 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----heeEEeccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999988754322 2233334444444556778889999999999999999
Q ss_pred CCCChhHHHHHhcccc
Q 012608 268 ERPNPKSLVTALSPLQ 283 (460)
Q Consensus 268 ~Rps~~~il~~L~~~~ 283 (460)
.||++++++..|+-..
T Consensus 354 NRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 354 NRPSFRQILLHLDIAS 369 (904)
T ss_pred CCccHHHHHHHHhhcC
Confidence 9999999999886553
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=321.46 Aligned_cols=237 Identities=18% Similarity=0.223 Sum_probs=211.5
Q ss_pred CCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
+.+++++++.||.|+||.|.+++ ..+|..+|+|+++....- ..+....|..+|+.+.||.++++++.+.+.+.+||
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 46678999999999999999999 456999999999765432 24678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||++||.|..+++ +.+++++..++-++.||+.||+|||+.+ |++||+||+|||+|.+|.+||+|||+|+.....
T Consensus 122 vmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~-iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLD-IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred EEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcC-eeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 999999999999997 4678999999999999999999999999 999999999999999999999999999987654
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
-+.+||+.|+|||.+...++..++|.|||||++|||+.|.+||.......+.++....-. .+|.-+++++.+|+
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v------~fP~~fs~~~kdLl 272 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV------KFPSYFSSDAKDLL 272 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc------cCCcccCHHHHHHH
Confidence 467999999999999999999999999999999999999999988766555555443322 46777889999999
Q ss_pred HHHcccCCCCC
Q 012608 259 SRCLQYEPRER 269 (460)
Q Consensus 259 ~~~l~~~p~~R 269 (460)
.++|+.|-.+|
T Consensus 273 ~~LL~vD~t~R 283 (355)
T KOG0616|consen 273 KKLLQVDLTKR 283 (355)
T ss_pred HHHHhhhhHhh
Confidence 99999999999
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=339.81 Aligned_cols=250 Identities=16% Similarity=0.175 Sum_probs=212.1
Q ss_pred hcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
..+.++++++..||+|+||.||+++ ..+|..+|+|+++.+.. ...+....|-.+|...++|+||+++-.|.+.+.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 4577889999999999999999999 56799999999987643 3467889999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC-
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR- 176 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~- 176 (460)
||||||+|||++..++. ..+.++++.+..++.+++.||..+|+.| +|||||||+|+|||..|.+||+|||++....
T Consensus 217 YLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~g-yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLG-YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcC-cccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999999997 4678999999999999999999999999 9999999999999999999999999875210
Q ss_pred -------------------------C-----C--------------------CCccCCCcccCccccccCCCCCCCceeh
Q 012608 177 -------------------------D-----G--------------------KSYSTNLAFTPPEYLRTGRVTPESVIYS 206 (460)
Q Consensus 177 -------------------------~-----~--------------------~~~~~t~~y~aPE~~~~~~~~~~sDi~s 206 (460)
. . .+.+|||.|||||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0 0 0235789999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCC---ChhHHHH
Q 012608 207 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP---NPKSLVT 277 (460)
Q Consensus 207 lG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---s~~~il~ 277 (460)
||||+|||+.|.+||.++.......+..........+. ...++++..++|.+||. ||.+|. .++||.+
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~--~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE--EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC--cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 99999999999999998877666554433222111111 12345899999999999 999994 5777766
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=329.81 Aligned_cols=254 Identities=25% Similarity=0.321 Sum_probs=202.7
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCC-----eeEEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLLVA 101 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~ 101 (460)
+.-.+.+|.|+||+||+|. ..+++.||||+...+ .+.-.+|+++|+.++|||||++..+|.... ...+||
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d----~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD----KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCC----CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 3445667999999999999 556899999998543 345568999999999999999999886432 234899
Q ss_pred EcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-CCeEEccCCCcccCCCC
Q 012608 102 EYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~DFg~a~~~~~~ 178 (460)
|||| .||.+.++.. .+..++...+.-++.||++||.|||+.| |+||||||.|+|+|.+ |.+||||||.|+.....
T Consensus 102 eymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~-IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 102 EYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG-ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred Hhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC-cccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 9998 8999998742 3567888889999999999999999999 9999999999999955 99999999999876543
Q ss_pred ---CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhh----------------hhh-------
Q 012608 179 ---KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDL----------------IRD------- 231 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~----------------~~~------- 231 (460)
.++..|..|+|||.+.+.. |+.+.||||.|||+.||+-|++.|++..... +..
T Consensus 180 epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~ 259 (364)
T KOG0658|consen 180 EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTE 259 (364)
T ss_pred CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccccc
Confidence 4677899999999998865 8999999999999999999999998763221 111
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCCCC
Q 012608 232 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 289 (460)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~~ 289 (460)
.....+....+...+....+++..+|+.++|+.+|.+|.++.+++. .++..+...|
T Consensus 260 ~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~--h~fFdelr~~ 315 (364)
T KOG0658|consen 260 FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA--HPFFDELRDP 315 (364)
T ss_pred ccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc--chhhHHhhCc
Confidence 1122222233323355677899999999999999999999999987 4444444433
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-46 Score=338.78 Aligned_cols=243 Identities=19% Similarity=0.284 Sum_probs=208.1
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.|..+..||+|+||.||+|. ..+++.||+|++......+ .+.+.+|+.+|.+++++||.++|+.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 35666889999999999999 5569999999998765444 788999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
.||++.+.+. .+..+.+..+.-++++++.|+.|||+++ .+|||||+.|||+..+|.+||+|||.+...... .+
T Consensus 94 ~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~-kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 94 GGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEK-KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred cCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcc-eecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 9999999995 3444588888899999999999999999 999999999999999999999999998765533 57
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
+.||+.|||||++....|+.++||||||++.+||++|.+|+..... .+. ..+.....++.+...+++.+++|+..
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP----mrv-lflIpk~~PP~L~~~~S~~~kEFV~~ 245 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP----MRV-LFLIPKSAPPRLDGDFSPPFKEFVEA 245 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc----ceE-EEeccCCCCCccccccCHHHHHHHHH
Confidence 8999999999999988899999999999999999999987644321 111 11222223334445788999999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
||.+||+.|||+.++++
T Consensus 246 CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 246 CLDKNPEFRPSAKELLK 262 (467)
T ss_pred HhhcCcccCcCHHHHhh
Confidence 99999999999999986
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=346.06 Aligned_cols=254 Identities=22% Similarity=0.336 Sum_probs=203.5
Q ss_pred cccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeC-Ce
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG-DE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~ 96 (460)
.+|++.+.||.|+||.||+|.. .+++.||||+++..... ....+.+|+.++.++ +||||+++++++... +.
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 3688899999999999999973 23578999998754322 245789999999999 899999999988754 45
Q ss_pred eEEEEEcCCCCCHHhhhhccC-----------------------------------------------------------
Q 012608 97 RLLVAEYMPNETLAKHLFHWE----------------------------------------------------------- 117 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~----------------------------------------------------------- 117 (460)
.++||||++||+|.+++....
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 889999999999999886421
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------CCccCCCcccCc
Q 012608 118 -THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPP 190 (460)
Q Consensus 118 -~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aP 190 (460)
..++++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....++..|+||
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 245 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP 245 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence 134778889999999999999999999 999999999999999999999999998764322 223456789999
Q ss_pred cccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCC
Q 012608 191 EYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269 (460)
Q Consensus 191 E~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 269 (460)
|++.+..++.++|||||||++|||++ |..||............. .. ......+..+++.+.+++.+||+.||.+|
T Consensus 246 E~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~R 321 (338)
T cd05102 246 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRL---KD-GTRMRAPENATPEIYRIMLACWQGDPKER 321 (338)
T ss_pred HHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH---hc-CCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 99988889999999999999999997 888886532211110100 00 01112345667899999999999999999
Q ss_pred CChhHHHHHhccccc
Q 012608 270 PNPKSLVTALSPLQK 284 (460)
Q Consensus 270 ps~~~il~~L~~~~~ 284 (460)
||+.++++.|+.+..
T Consensus 322 Ps~~el~~~l~~~~~ 336 (338)
T cd05102 322 PTFSALVEILGDLLQ 336 (338)
T ss_pred cCHHHHHHHHHHHHh
Confidence 999999999987754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=332.66 Aligned_cols=261 Identities=17% Similarity=0.230 Sum_probs=212.7
Q ss_pred CCCccccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCc
Q 012608 7 LPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNR 83 (460)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~ 83 (460)
+..++.++..++.. .. ...+|+|++|.||+|.. +|+.||||.++...... .+.+.+|+.++++++|||
T Consensus 9 ~~~~~~i~~~~i~~-----~~---~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 79 (283)
T PHA02988 9 INDIKCIESDDIDK-----YT---SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNN 79 (283)
T ss_pred cCcceecCHHHcCC-----CC---CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCC
Confidence 56677777777622 11 13569999999999998 78999999997654443 467889999999999999
Q ss_pred cceeeeEEee----CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEE
Q 012608 84 LTNLLGCCCE----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILF 158 (460)
Q Consensus 84 iv~~~~~~~~----~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill 158 (460)
|+++++++.. ....++||||++||+|.+++.. ...+++.....++.|++.||.|||+. + ++||||||+|||+
T Consensus 80 Iv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~-~~Hrdlkp~nill 156 (283)
T PHA02988 80 ILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTN-KPYKNLTSVSFLV 156 (283)
T ss_pred EEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCC-CCCCcCChhhEEE
Confidence 9999999876 3468899999999999999964 45788999999999999999999985 6 8899999999999
Q ss_pred cCCCCeEEccCCCcccCCCC-CCccCCCcccCcccccc--CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc
Q 012608 159 DEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 235 (460)
Q Consensus 159 ~~~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 235 (460)
++++.+||+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......+......
T Consensus 157 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~ 236 (283)
T PHA02988 157 TENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN 236 (283)
T ss_pred CCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 99999999999998764433 34567899999999976 6789999999999999999999999876543332222111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
. ......+..+++.+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 237 ~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 237 K----NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred c----CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 1 1112234457789999999999999999999999999998765
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=362.72 Aligned_cols=424 Identities=18% Similarity=0.158 Sum_probs=286.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
+.+|++++.||+|+||.||+|.. .+|+.||+|++....... .+.+.+|++++++++||||+++++++..++..+++
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 35788999999999999999995 469999999987543322 45789999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 101 AEYMPNETLAKHLFHWE---------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
|||++|++|.+++.... ....++..++.++.||+.||+|||+++ |+||||||+|||++.++.++|+|||+
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G-IIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG-VLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchheEEEcCCCCEEEEecCc
Confidence 99999999999885311 123556778999999999999999999 99999999999999999999999999
Q ss_pred cccCCC----------------------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh
Q 012608 172 MKNSRD----------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 229 (460)
Q Consensus 172 a~~~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~ 229 (460)
+..... .....||+.|+|||.+.+..++.++|||||||++|+|+||..||........
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 875411 0124589999999999988899999999999999999999999865432221
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCC-ChhHHHHHhccccccCCC-------Cccccc-------
Q 012608 230 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP-NPKSLVTALSPLQKETEV-------PSHVLM------- 294 (460)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp-s~~~il~~L~~~~~~~~~-------~~~~~~------- 294 (460)
.... ....+.. ......+++.+.+++.+||+.||++|| +++++++.|+.+...... +.....
T Consensus 240 ~~~~--~i~~P~~-~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~ 316 (932)
T PRK13184 240 SYRD--VILSPIE-VAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEP 316 (932)
T ss_pred hhhh--hccChhh-ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccch
Confidence 1111 1111100 011235678899999999999999995 677777777665332110 000000
Q ss_pred -----CC----CCCC-----------------------------CCCCCCCCcCcCCccchh-----------------H
Q 012608 295 -----GI----PHSA-----------------------------SVSPLSPLGEACSRRDLT-----------------A 319 (460)
Q Consensus 295 -----~~----~~~~-----------------------------~~~~~~~~~~~~~~~~~~-----------------~ 319 (460)
.. +.+. ...-..|..+...+.+.. .
T Consensus 317 iLlsk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 396 (932)
T PRK13184 317 ILLSKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSL 396 (932)
T ss_pred hhhhhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeee
Confidence 00 0000 000001111111111000 0
Q ss_pred HHHHHHhhhccCcchhhhhhchhhhhhhH-------------------------------HHHH----------------
Q 012608 320 IHEILEKISYKDDEGVANELSFQMWTDQM-------------------------------QETL---------------- 352 (460)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~---------------- 352 (460)
+.+.++-.... .........|....++. +++.
T Consensus 397 ~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (932)
T PRK13184 397 VKNGLEIQKKS-QEIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALR 475 (932)
T ss_pred ecccceeecCC-cccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCcee
Confidence 00000000000 00000111111100000 1111
Q ss_pred -HhHHhhhHHHhhCCHHHHHHHHHHHhhcCCC--ccHHHHhhHHHHHHhc----C---ChHHHHHHHHHhhhhCCcchHH
Q 012608 353 -NSKKKGDVAFRQKDLKDAIECYTQFIDAGTM--VSPTVYARRSLCYLMS----D---MPQDALNDAMQAQIISPIWHIA 422 (460)
Q Consensus 353 -~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~~~~~~~~~~----~---~~~~A~~~~~~a~~l~p~~~~a 422 (460)
.-.....+....+.|++|+..|++.-+.-|. ...++.++.|.+.+.. | .+++|+.-|++. .-.|.-|--
T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 554 (932)
T PRK13184 476 VSCLAVPDAFLAEKLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSYL-HGGVGAPLE 554 (932)
T ss_pred eecccCcHHHHhhHHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHHh-cCCCCCchH
Confidence 1133456677889999999999999998886 2346677778777653 2 356677766653 345667777
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 423 SYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 423 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
|..++.+|..+|+|+|-+++|.-|++--|...
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (932)
T PRK13184 555 YLGKALVYQRLGEYNEEIKSLLLALKRYSQHP 586 (932)
T ss_pred HHhHHHHHHHhhhHHHHHHHHHHHHHhcCCCC
Confidence 88889999999999999999999999877654
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-44 Score=338.45 Aligned_cols=248 Identities=18% Similarity=0.203 Sum_probs=221.0
Q ss_pred CcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCe-eEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-RLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-~~lv 100 (460)
.+.|..++++|.|+||.+++.+ ..+++.+++|.+....... .+...+|+.++++++|||||.+.+.|..++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 4678999999999999999998 4568899999987655443 4578899999999999999999999999888 8999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|+||+||++.+.+...++..++++.+..|+.|++.|+.|||++. |+|||||++||+++.++.++|+|||+|+.....
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~-iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~ 161 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR-VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS 161 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence 99999999999999877788999999999999999999999888 999999999999999999999999999987765
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
.+..||+.||+||.+.+.+|..|+|||||||++|||++-+++|.......+.......... ..+...+.++..
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~-----Plp~~ys~el~~ 236 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS-----PLPSMYSSELRS 236 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC-----CCCccccHHHHH
Confidence 4678999999999999999999999999999999999999999887666665555444422 345567789999
Q ss_pred HHHHHcccCCCCCCChhHHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~~ 278 (460)
++..||+.+|..||++.+++..
T Consensus 237 lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 237 LVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHhhcCCccCCCHHHHhhC
Confidence 9999999999999999999975
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=306.32 Aligned_cols=258 Identities=21% Similarity=0.259 Sum_probs=225.2
Q ss_pred CCCCCCCccccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC---CCCHHHHHHHHHHHhc
Q 012608 3 EVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQ 78 (460)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~ 78 (460)
++++-|..+.|++++ +++.+.||.|.||.||+|+ ..++..||+|++..+. .+...++.+|++|-..
T Consensus 9 ~~~~~~~~~~~~l~d----------feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~ 78 (281)
T KOG0580|consen 9 NPFGSRATKTWTLDD----------FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSH 78 (281)
T ss_pred CCcccccccccchhh----------ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecc
Confidence 455666677777766 7888999999999999999 5678899999986543 2236789999999999
Q ss_pred CCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE
Q 012608 79 LRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158 (460)
Q Consensus 79 l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill 158 (460)
|+||||.+++++|-+....|+++||.++|+|...+.......+++.....++.|++.|+.|+|.++ ||||||||+|+|+
T Consensus 79 L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~-VIhRdiKpenlLl 157 (281)
T KOG0580|consen 79 LRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR-VIHRDIKPENLLL 157 (281)
T ss_pred cCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC-cccCCCCHHHhcc
Confidence 999999999999999999999999999999999998777788999999999999999999999999 9999999999999
Q ss_pred cCCCCeEEccCCCcccCC--CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc
Q 012608 159 DEDGNPRLSTFGLMKNSR--DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 236 (460)
Q Consensus 159 ~~~~~~kl~DFg~a~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 236 (460)
+..+.+|++|||-+...+ ...+.+||..|.+||...+...+...|+|++|+++||++.|.+||...............
T Consensus 158 g~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~ 237 (281)
T KOG0580|consen 158 GSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV 237 (281)
T ss_pred CCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc
Confidence 999999999999766543 446789999999999999999999999999999999999999999877655554443322
Q ss_pred cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.-.+|..++.+..++|.+|+..+|.+|.+..++++
T Consensus 238 ------~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 238 ------DLKFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ------cccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 12345678899999999999999999999999876
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=324.32 Aligned_cols=245 Identities=20% Similarity=0.319 Sum_probs=201.1
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecC--CCCCCHHHHHHHHHHHhcCCCCccceeeeEEee-----CCeeEE
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE-----GDERLL 99 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 99 (460)
|..++.||.|+||.|+.+. ..+|+.||||++.. ......++..+|+.+|+.++|+||+.+.+++.. -+.+|+
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYi 103 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYL 103 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEE
Confidence 4447899999999999999 56799999999973 344457889999999999999999999999865 356899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC--
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~-- 177 (460)
|+|+|+ .+|.+.++ .+..++.+.+..+++|++.||.|+|+.+ |+|||+||+|++++.++.+||||||+|+....
T Consensus 104 V~elMe-tDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAn-ViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~ 179 (359)
T KOG0660|consen 104 VFELME-TDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSAN-VIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF 179 (359)
T ss_pred ehhHHh-hHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhccc-ccccccchhheeeccCCCEEeccccceeeccccC
Confidence 999995 89999886 3455999999999999999999999999 99999999999999999999999999997742
Q ss_pred ----CCCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhh-------------------hhh--
Q 012608 178 ----GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-------------------IRD-- 231 (460)
Q Consensus 178 ----~~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~-------------------~~~-- 231 (460)
.+.+..|..|.|||.+.. ..||.+.||||+||++.||++|++.|++...-. +..
T Consensus 180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ 259 (359)
T KOG0660|consen 180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK 259 (359)
T ss_pred cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence 256677999999999854 569999999999999999999999987752110 000
Q ss_pred -----ccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 232 -----RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 232 -----~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......+...+ ....+..++...+++++||..||.+|+|++++++
T Consensus 260 ar~yi~slp~~p~~~f-~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 260 ARPYIKSLPQIPKQPF-SSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHHhCCCCCCCCH-HHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00111111111 1223467789999999999999999999999998
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=338.19 Aligned_cols=245 Identities=17% Similarity=0.190 Sum_probs=206.7
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.+.+|++++.||+|+||.||+++. .+|+.||+|+++... ....+.+.+|+.++++++||||+++++++..++..++
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 356789999999999999999995 468999999986532 2234678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||++|++|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 96 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 96 LLEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKD-IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EEcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 9999999999998863 457889999999999999999999999 999999999999999999999999998865443
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
....||+.|+|||.+.+..++.++|||||||++|+|++|..||............... ...++..++..+.+++
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 246 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG------RLKFPNWFDGRARDLV 246 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CcCCCCCCCHHHHHHH
Confidence 3457899999999999888999999999999999999999998765433222221111 1123445678899999
Q ss_pred HHHcccCCCCCCC-----hhHHHH
Q 012608 259 SRCLQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps-----~~~il~ 277 (460)
.+||+.||.+||+ +++++.
T Consensus 247 ~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 247 KGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhc
Confidence 9999999999986 577765
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-45 Score=359.08 Aligned_cols=255 Identities=25% Similarity=0.356 Sum_probs=215.2
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
++.+.+++||+|+||.||+|... +..-||||.++..... ...+|++|++++..|+|||||+++|+|..++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 34567899999999999999843 2457999999987766 4678999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC--------C----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEE
Q 012608 99 LVAEYMPNETLAKHLFHWE--------T----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 166 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--------~----~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl 166 (460)
||+|||..|+|.++++... + .+++..+.+.|+.||+.|++||-++. +|||||-.+|.|++++..|||
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~-FVHRDLATRNCLVge~l~VKI 644 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH-FVHRDLATRNCLVGENLVVKI 644 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc-ccccchhhhhceeccceEEEe
Confidence 9999999999999998542 1 23888999999999999999999998 999999999999999999999
Q ss_pred ccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccc
Q 012608 167 STFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTD 239 (460)
Q Consensus 167 ~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 239 (460)
+|||+++..-... ...-++.|||||.+..+++|.+||||||||+|||+++ |+.|+.+...+..-+.. ..
T Consensus 645 sDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i----~~ 720 (774)
T KOG1026|consen 645 SDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI----RA 720 (774)
T ss_pred cccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH----Hc
Confidence 9999998543221 2233689999999999999999999999999999998 56676665443332222 22
Q ss_pred ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
... -..|.++|.++.+|+..||+.+|++||++++|-..|+.+....
T Consensus 721 g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 721 GQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred CCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 222 3567889999999999999999999999999999999886543
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-44 Score=327.87 Aligned_cols=250 Identities=18% Similarity=0.192 Sum_probs=205.8
Q ss_pred CcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC--------------CCHHHHHHHHHHHhcCCCCccceeee
Q 012608 25 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW--------------PDPRQFLEEARSVGQLRNNRLTNLLG 89 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~~iv~~~~ 89 (460)
...|++++.||+|.||.|-+|. ..+++.||||++.+... ...+...+||.+|++|+|||||+++.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 3468899999999999999999 55699999999954321 12368999999999999999999999
Q ss_pred EEee--CCeeEEEEEcCCCCCHHhhhhccCCCC-CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEE
Q 012608 90 CCCE--GDERLLVAEYMPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 166 (460)
Q Consensus 90 ~~~~--~~~~~lv~e~~~g~sL~~~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl 166 (460)
+..+ .+.+|||+|||..|.+...- ...+ +++.++++++++++.||+|||.+| ||||||||+|+|++++|++||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg-iiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG-IIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEEcCCCcEEe
Confidence 9865 46799999999988875433 3455 999999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC---------CCccCCCcccCccccccCC----CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc
Q 012608 167 STFGLMKNSRDG---------KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 233 (460)
Q Consensus 167 ~DFg~a~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~ 233 (460)
+|||.+...... ....||+.|+|||...++. .+.+.||||+||+||+|+.|+.||.++....+..+.
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI 331 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI 331 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence 999988755322 2357999999999987633 366999999999999999999999988776666555
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
......- ...+.+.+++.++|.+||.+||+.|.+..+|.......
T Consensus 332 vn~pL~f----P~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 332 VNDPLEF----PENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred hcCcccC----CCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 4432211 11224678999999999999999999999998754433
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=333.68 Aligned_cols=247 Identities=16% Similarity=0.215 Sum_probs=203.1
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
|++++.||+|+||.||++. ..+|+.||+|.+...... ....+.+|+.++++++|+||+.+++++..++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 4667888999999999998 567999999998654322 234678999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 180 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~ 180 (460)
++|++|.+++.......+++..+..++.|++.||.|||+++ |+||||||+|||+++++.++|+|||++...... ..
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER-IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 99999998876544557899999999999999999999999 999999999999999999999999998765432 34
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..||..|+|||++.+..++.++|||||||++|+|++|+.||................. .....++...+.++.+|+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li~~ 238 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK--EDQEEYSEKFSEDAKSICRM 238 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh--cccccCCccCCHHHHHHHHH
Confidence 5689999999999988999999999999999999999999875432111111111111 11123455677899999999
Q ss_pred HcccCCCCCCC-----hhHHHH
Q 012608 261 CLQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps-----~~~il~ 277 (460)
||+.||.+||+ ++++++
T Consensus 239 ~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 239 LLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HhhcCHHHhcCCCCCCHHHHhc
Confidence 99999999997 777776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-44 Score=335.42 Aligned_cols=242 Identities=18% Similarity=0.188 Sum_probs=204.9
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||+|+||.||++.. .+|+.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 578899999999999999995 4699999999865322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-CCc
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 181 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~~ 181 (460)
|++|++|.+++.. .+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 9999999999863 457899999999999999999999999 999999999999999999999999998765433 345
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (460)
.||+.|+|||.+.+..++.++|||||||++|+|++|+.||............... ...++...+..+.+++.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------KLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CcCCCccCCHHHHHHHHHH
Confidence 6899999999998888999999999999999999999998765433322221111 1134455678999999999
Q ss_pred cccCCCCCCC-----hhHHHH
Q 012608 262 LQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 262 l~~~p~~Rps-----~~~il~ 277 (460)
|+.||.+||+ +.++++
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred cCCCHHHccCCccCCHHHHhc
Confidence 9999999995 888876
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=351.62 Aligned_cols=338 Identities=21% Similarity=0.253 Sum_probs=260.3
Q ss_pred ccCHHHHHHHhcCCccc------chhcccCCCCCCeEEEEEEcC----CcEEEEEEecCCCCCC-HHHHHHHHHHHhcCC
Q 012608 12 EFTLEQLKNATSGFAVE------NIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLR 80 (460)
Q Consensus 12 ~~~~~~~~~~~~~f~~~------~i~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~ 80 (460)
-+||+|..++...|..+ .|-+.||.|.||.|++|+++- ...||||.++...... ..+|+.|+.||.+++
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 46888888888777553 677889999999999999642 3579999999876443 678999999999999
Q ss_pred CCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC
Q 012608 81 NNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160 (460)
Q Consensus 81 h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~ 160 (460)
||||+++.|+.......+||+|||++|+|+.+++.+. +.++..++..+++.|+.|++||.+.+ +|||||...|||++.
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~-YVHRDLAARNILVNs 766 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMN-YVHRDLAARNILVNS 766 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcC-chhhhhhhhheeecc
Confidence 9999999999999999999999999999999998744 66999999999999999999999999 999999999999999
Q ss_pred CCCeEEccCCCcccCCCCC-C----ccC--CCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhc
Q 012608 161 DGNPRLSTFGLMKNSRDGK-S----YST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDR 232 (460)
Q Consensus 161 ~~~~kl~DFg~a~~~~~~~-~----~~~--t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~ 232 (460)
+...|++|||+++...++. . ..| ++.|.|||.+...++|.+|||||+|+|+||.++ |..|+.....+.....
T Consensus 767 nLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka 846 (996)
T KOG0196|consen 767 NLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 846 (996)
T ss_pred ceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHH
Confidence 9999999999999775543 1 122 478999999999999999999999999999766 7778766544433333
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCCCCcccccCCCCCCCCCCCCCCcCcC
Q 012608 233 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEAC 312 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (460)
..+.. .-..|.++|..+.+|+..||++|-.+||.+.+|+..|+.+.+.+..-... .+..+..+...+....+
T Consensus 847 Ie~gy-----RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~---~~~~~r~s~~lld~~~~ 918 (996)
T KOG0196|consen 847 IEQGY-----RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTI---APESPRPSQPLLDRSGS 918 (996)
T ss_pred HHhcc-----CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhccc---CCCCCCCcccccCCCCC
Confidence 22222 12245688999999999999999999999999999999998765321111 11111111111122233
Q ss_pred CccchhHHHHHHHhhhc---cCcchhhhhhchhhhhhhHHHHHHhHHhhhHH
Q 012608 313 SRRDLTAIHEILEKISY---KDDEGVANELSFQMWTDQMQETLNSKKKGDVA 361 (460)
Q Consensus 313 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 361 (460)
....+..+.++++.|+. .+.+..++-.+++.-.+. +++++...|..+
T Consensus 919 ~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q~--s~eDl~~~Gitl 968 (996)
T KOG0196|consen 919 DFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQM--SAEDLLRLGITL 968 (996)
T ss_pred CCcccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHhh--hHHHHHhhceee
Confidence 44556678888888874 444444444444443332 466777777764
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-44 Score=339.99 Aligned_cols=253 Identities=20% Similarity=0.297 Sum_probs=209.6
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
....+..+||+|.||+||+|.+.. .||||+++.....+ .+.|+.||.++++-+|.||+-+.|+|..++. .||+.+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred HHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 345678899999999999999643 49999998876554 5789999999999999999999999988776 999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC------
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 177 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~------ 177 (460)
|+|.||..+++.. ...+...+.+.|++||+.|+.|||.++ |||||||..||++.+++.|||+|||++.....
T Consensus 469 CeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK~-IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q 546 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAKN-IIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ 546 (678)
T ss_pred ccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhhh-hhhhhccccceEEccCCcEEEecccceeeeeeeccccc
Confidence 9999999999763 467999999999999999999999999 99999999999999999999999999875432
Q ss_pred CCCccCCCcccCccccccC---CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 178 GKSYSTNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 178 ~~~~~~t~~y~aPE~~~~~---~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
.....|...|||||++..+ +|++.+||||||+|+|||+||..|+.....+.+.-..-.....+. ......++++++
T Consensus 547 ~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd-~s~~~s~~pk~m 625 (678)
T KOG0193|consen 547 LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD-LSKIRSNCPKAM 625 (678)
T ss_pred cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc-chhhhccCHHHH
Confidence 1344577899999999753 589999999999999999999999875544333221111111111 112345678899
Q ss_pred HHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 255 VRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.+|+..||..++++||.+.+|+..|+.+.+
T Consensus 626 k~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 626 KRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 999999999999999999999998887765
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=338.49 Aligned_cols=237 Identities=20% Similarity=0.242 Sum_probs=200.4
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
+.||+|+||.||++.. .+|+.||||+++.... .....+.+|+.++++++||||+++++++..++..++||||++|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3589999999999984 5699999999875422 22456889999999999999999999999999999999999999
Q ss_pred CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCccC
Q 012608 108 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 183 (460)
Q Consensus 108 sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~~ 183 (460)
+|.+++.. .+.+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 157 (323)
T cd05571 81 ELFFHLSR--ERVFSEDRARFYGAEIVSALGYLHSCD-VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceec
Confidence 99998863 467899999999999999999999999 99999999999999999999999999875322 234568
Q ss_pred CCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 012608 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263 (460)
Q Consensus 184 t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (460)
|+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..+++++.+++.+||+
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05571 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999998765443332222111 123455678899999999999
Q ss_pred cCCCCCC-----ChhHHHH
Q 012608 264 YEPRERP-----NPKSLVT 277 (460)
Q Consensus 264 ~~p~~Rp-----s~~~il~ 277 (460)
.||++|| ++.++++
T Consensus 232 ~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 232 KDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCHHHcCCCCCCCHHHHHc
Confidence 9999999 7888876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=339.65 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=213.5
Q ss_pred cccchhcccCCCCCCeEEEEEEcC--C---cEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN--Q---RRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~--~---~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
++..+.++||+|+||.||+|++.. + ..||||..+... .....+|.+|++++++++|||||+++|++.....+
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344556899999999999999532 2 238999988633 22367899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++|||+|+||+|.+++... ...++..+...++.+.+.||+|||+++ +|||||-.+|+|++.++.+||+|||+++....
T Consensus 237 ~ivmEl~~gGsL~~~L~k~-~~~v~~~ek~~~~~~AA~Gl~YLh~k~-~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~ 314 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKN-KKSLPTLEKLRFCYDAARGLEYLHSKN-CIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ 314 (474)
T ss_pred EEEEEecCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHhHHHHHHHCC-CcchhHhHHHheecCCCeEEeCccccccCCcc
Confidence 9999999999999999853 336999999999999999999999999 99999999999999999999999999876542
Q ss_pred CC----CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 178 GK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 178 ~~----~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
.. ...-+..|+|||.+..+.++.++|||||||++||+++ |..|+++............ ...+...+...|.
T Consensus 315 ~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~----~~~r~~~~~~~p~ 390 (474)
T KOG0194|consen 315 YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK----NGYRMPIPSKTPK 390 (474)
T ss_pred eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh----cCccCCCCCCCHH
Confidence 11 1234678999999999999999999999999999999 7788887655544443311 1122234456778
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
++..++.+||..+|++|||+.++.+.|+.+......
T Consensus 391 ~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 391 ELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999998876543
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=343.21 Aligned_cols=253 Identities=22% Similarity=0.330 Sum_probs=203.9
Q ss_pred cccchhcccCCCCCCeEEEEEE-c-----CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-E-----NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
.+|++.+.||+|+||.||++.. . ++..||+|+++.....+ .+.+.+|+.+++.+ +||||+++++++...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 4688999999999999999873 2 24579999997654332 45688999999999 899999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccC------------------------------------------------------------
Q 012608 98 LLVAEYMPNETLAKHLFHWE------------------------------------------------------------ 117 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~------------------------------------------------------------ 117 (460)
++||||+++|+|.+++....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 99999999999999885321
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC------CccC
Q 012608 118 --------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYST 183 (460)
Q Consensus 118 --------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~------~~~~ 183 (460)
..++++..+++++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++...... ...+
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g-iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~ 276 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN-CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARL 276 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCC
Confidence 124778899999999999999999999 9999999999999999999999999987644322 2234
Q ss_pred CCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 184 t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
+..|||||++.+..++.++|||||||++|+|++ |+.||............ .........+...++++.+++.+||
T Consensus 277 ~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl 352 (374)
T cd05106 277 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKM----VKRGYQMSRPDFAPPEIYSIMKMCW 352 (374)
T ss_pred ccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHH----HHcccCccCCCCCCHHHHHHHHHHc
Confidence 567999999988889999999999999999997 99888654322111010 0111111233345689999999999
Q ss_pred ccCCCCCCChhHHHHHhcccc
Q 012608 263 QYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 263 ~~~p~~Rps~~~il~~L~~~~ 283 (460)
+.||.+|||+.++++.|+.+.
T Consensus 353 ~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 353 NLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-43 Score=321.21 Aligned_cols=243 Identities=17% Similarity=0.237 Sum_probs=211.9
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.+|++...||.|.||.|-++. ...|+.||||.++.+...+ .-.+.+|++||..|+||||+.++.+|++.+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 358999999999999999999 6789999999998776555 346889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||..||.|.|++. ..+.+++.+++.+++||..|+.|+|.++ ++|||||.+|||+|.++++||+|||++..+...
T Consensus 133 EYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknr-VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 133 EYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNR-VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhcc-ceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 9999999999997 4577999999999999999999999999 999999999999999999999999999877655
Q ss_pred CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
++++|++.|.+||.+.+.+| ++..|.||||++||.|..|.-||.+.....+-...... . ...+.-|.+..-+
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G----a---YrEP~~PSdA~gL 282 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG----A---YREPETPSDASGL 282 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc----c---ccCCCCCchHHHH
Confidence 58899999999999999887 67999999999999999999999886544332221111 0 1122334678899
Q ss_pred HHHHcccCCCCCCChhHHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~ 278 (460)
|++||..||++|.|..+|...
T Consensus 283 IRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred HHHHHhcCcccchhHHHHhhh
Confidence 999999999999999998764
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-43 Score=334.41 Aligned_cols=250 Identities=19% Similarity=0.227 Sum_probs=204.0
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.+|++++.||+|+||.||++.. .+|..||+|.+...... ....+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 5688999999999999999995 46899999998764322 245799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--CCc
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 181 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--~~~ 181 (460)
++|++|.+++.. ...+++..+..++.|++.||.|||+++.|+||||||+|||++.++.++|+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 999999999863 4568999999999999999999998644999999999999999999999999998755432 345
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc-------------------------
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------------- 236 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~------------------------- 236 (460)
.+|..|+|||++.+..++.++|||||||++|+|+||+.||.......+.......
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 6899999999999888999999999999999999999998643322111100000
Q ss_pred -----------------cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 -----------------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 -----------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..............++++.+|+.+||+.||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000011112246788999999999999999999999987
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=333.34 Aligned_cols=235 Identities=20% Similarity=0.221 Sum_probs=196.9
Q ss_pred cCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 34 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 34 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
||+|+||.||++.. .+++.||+|+++... ......+.+|+.++++++||||+++++++..++..++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999995 468999999986532 22356788999999999999999999999999999999999999999
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCccCCC
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYSTNL 185 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~~t~ 185 (460)
.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++.... .....||+
T Consensus 81 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQR--EGRFDLSRARFYTAELLCALENLHKFN-VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 998863 457899999999999999999999999 99999999999999999999999999875322 23456899
Q ss_pred cccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccC
Q 012608 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265 (460)
Q Consensus 186 ~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 265 (460)
.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...++++.+++.+||+.|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcCCC
Confidence 999999999888999999999999999999999998765443332222111 12345567789999999999999
Q ss_pred CCCCCChhHHHH
Q 012608 266 PRERPNPKSLVT 277 (460)
Q Consensus 266 p~~Rps~~~il~ 277 (460)
|.+||++..+.+
T Consensus 232 p~~R~~~~~~~e 243 (312)
T cd05585 232 PTRRLGYNGAQE 243 (312)
T ss_pred HHHcCCCCCHHH
Confidence 999986544333
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=337.05 Aligned_cols=246 Identities=17% Similarity=0.205 Sum_probs=207.5
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEc-C-CcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLE-N-QRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
..+.+|++++.||.|+||.||+|... + +..||+|++.... ....+.+.+|+.+++.++||||+++++++..++..
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~ 106 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL 106 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence 45677999999999999999999843 3 3689999986432 22356788999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||++|++|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 107 ~lv~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLN-IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999999863 457899999999999999999999999 99999999999999999999999999876543
Q ss_pred C-CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 178 G-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 178 ~-~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
. ....||+.|+|||++.+..++.++|||||||++|+|++|..||................ ..++...++.+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~ 257 (340)
T PTZ00426 184 RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI------IYFPKFLDNNCKH 257 (340)
T ss_pred CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHH
Confidence 2 35578999999999988889999999999999999999999987654433222222111 1245566788999
Q ss_pred HHHHHcccCCCCCC-----ChhHHHH
Q 012608 257 LASRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rp-----s~~~il~ 277 (460)
++.+||+.+|.+|+ +++++++
T Consensus 258 li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 258 LMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred HHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 99999999999995 7888876
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-43 Score=335.42 Aligned_cols=249 Identities=17% Similarity=0.181 Sum_probs=206.3
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||.|+||.||+|... +|+.||||+++... ......+.+|+.++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 5788999999999999999954 58999999987542 2235678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-CCCc
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-GKSY 181 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~-~~~~ 181 (460)
|++|++|.+++. ..+.+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..... ....
T Consensus 82 ~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 82 YVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELG-YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 999999999986 3457899999999999999999999999 99999999999999999999999999876543 3456
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc--ccccccccCCCCchhHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--MLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
.||+.|+|||.+.+..++.++|||||||++|+|++|..||.............. ..............++.++.+++.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~ 238 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT 238 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence 789999999999988899999999999999999999999876543322111110 000000000111245789999999
Q ss_pred HHcccCCCCCCChhHHHHH
Q 012608 260 RCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~ 278 (460)
+||..+|.+||++.++++.
T Consensus 239 ~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHhhChhhhcCCHHHHHhC
Confidence 9999999999999999873
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=338.90 Aligned_cols=250 Identities=21% Similarity=0.311 Sum_probs=201.5
Q ss_pred cccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
.++++.+.||+|+||.||+++. .++..||||+++.... ...+.+.+|+.++..+ +||||+++++++..++..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 3588899999999999999973 2466899999975432 2356788999999999 899999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccC------------------------------------------------------------
Q 012608 98 LLVAEYMPNETLAKHLFHWE------------------------------------------------------------ 117 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~------------------------------------------------------------ 117 (460)
++||||++||+|.+++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 99999999999999886421
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----
Q 012608 118 -------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 179 (460)
Q Consensus 118 -------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----- 179 (460)
...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 273 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN-CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVK 273 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCchhhEEEECCCcEEEecCccceeccCccccccc
Confidence 124778889999999999999999999 9999999999999999999999999987654322
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhh-hhhccccccccccccCCCCchhHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
...++..|+|||.+.+..++.++|||||||++|+|++ |..||....... ....... ......+...+.++.+
T Consensus 274 ~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~ 348 (375)
T cd05104 274 GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE-----GYRMLSPECAPSEMYD 348 (375)
T ss_pred CCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHh-----CccCCCCCCCCHHHHH
Confidence 2234567999999998889999999999999999998 777775432211 1110000 0011123345678999
Q ss_pred HHHHHcccCCCCCCChhHHHHHhcc
Q 012608 257 LASRCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~~L~~ 281 (460)
|+.+||+.||++|||+.++++.|+.
T Consensus 349 li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 349 IMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHHHccCChhHCcCHHHHHHHHHh
Confidence 9999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=320.49 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=210.6
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.++++++++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 457899999999999999999987888999999865432 3578999999999999999999999999889999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----- 179 (460)
+|++|.+++.......+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN-YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 9999999987655667889999999999999999999999 9999999999999999999999999987654322
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...++..|+|||.+.+..++.++|||||||++|+|+| |..||................. ......++.++.+++
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li 237 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR-----MPRMENCPDELYDIM 237 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCCHHHHHHH
Confidence 2234568999999988889999999999999999998 8888865433322222111111 112235678899999
Q ss_pred HHHcccCCCCCCChhHHHHHhccc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
.+||..+|++|||++++.+.|+.+
T Consensus 238 ~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 238 KTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHccCCcccCcCHHHHHHHHhcC
Confidence 999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=322.33 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=205.8
Q ss_pred CcccchhcccCCCCCCeEEEEEEc----CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
..++++.+.||+|+||.||+|++. .+..||+|.++...... ...+.+|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 456889999999999999999742 36789999987653322 4578999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~ 179 (460)
||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||.+.......
T Consensus 84 v~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~-iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 84 VTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMG-YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 99999999999988642 357899999999999999999999999 9999999999999999999999999866432221
Q ss_pred -----CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 180 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 180 -----~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
...++..|+|||.+.+..++.++|||||||++|++++ |..||................ ....+..++..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (266)
T cd05064 162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-----RLPAPRNCPNL 236 (266)
T ss_pred hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC-----CCCCCCCCCHH
Confidence 2234578999999988889999999999999999775 988886544332222111111 11234567789
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+.+++.+||+.+|.+|||+.++++.|..+
T Consensus 237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 237 LHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 99999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=332.34 Aligned_cols=238 Identities=19% Similarity=0.241 Sum_probs=200.1
Q ss_pred cccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 32 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
+.||+|+||.||++. ..+|+.||+|++..... .....+.+|+.+++.++||||+++++++..++..++||||++|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 357999999999999 45699999999975432 23457889999999999999999999999999999999999999
Q ss_pred CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCccC
Q 012608 108 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 183 (460)
Q Consensus 108 sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~~ 183 (460)
+|.+.+.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 81 ~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 157 (328)
T cd05593 81 ELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGK-IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCG 157 (328)
T ss_pred CHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccC
Confidence 99988863 457899999999999999999999999 99999999999999999999999999875322 234568
Q ss_pred CCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 012608 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263 (460)
Q Consensus 184 t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (460)
|+.|+|||.+.+..++.++|||||||++|+|++|+.||............... ...++..+++++.+++.+||.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~ 231 (328)
T cd05593 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------DIKFPRTLSADAKSLLSGLLI 231 (328)
T ss_pred CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC------CccCCCCCCHHHHHHHHHHcC
Confidence 99999999999888999999999999999999999998665433322221111 113455677899999999999
Q ss_pred cCCCCCC-----ChhHHHHH
Q 012608 264 YEPRERP-----NPKSLVTA 278 (460)
Q Consensus 264 ~~p~~Rp-----s~~~il~~ 278 (460)
.||.+|+ ++.++++.
T Consensus 232 ~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 232 KDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCHHHcCCCCCCCHHHHhcC
Confidence 9999997 78888863
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=328.68 Aligned_cols=254 Identities=21% Similarity=0.285 Sum_probs=199.7
Q ss_pred cccchhcccCCCCCCeEEEEEEcC-----------------CcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCcccee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN-----------------QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNL 87 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~ 87 (460)
.+|.+.++||+|+||.||++.+.+ +..||+|.+....... ...+.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 367888999999999999997432 3469999987653322 4579999999999999999999
Q ss_pred eeEEeeCCeeEEEEEcCCCCCHHhhhhccC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCccccc
Q 012608 88 LGCCCEGDERLLVAEYMPNETLAKHLFHWE-----------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHD 150 (460)
Q Consensus 88 ~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~-----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~D 150 (460)
++++...+..++||||+++++|.+++.... ...+++..+++++.||+.||.|||+.+ |+|||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-ivH~d 163 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRD 163 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC-ccccC
Confidence 999999999999999999999999885421 124678889999999999999999999 99999
Q ss_pred ccCCcEEEcCCCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhC--CCCCC
Q 012608 151 LNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG--KHIPP 222 (460)
Q Consensus 151 ikp~Nill~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg--~~p~~ 222 (460)
|||+|||++.++.+||+|||+++..... ....++..|+|||.+.++.++.++||||||+++|+|+++ ..|+.
T Consensus 164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 9999999999999999999998754332 223447789999999888899999999999999999875 44554
Q ss_pred Chhhhhhhhcccccccc--ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 223 SHALDLIRDRNLQMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 223 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
................. .......++.++..+.+++.+||+.+|++|||+.++.+.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 244 ELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred cCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 32222111110000000 00111224456789999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=326.61 Aligned_cols=251 Identities=19% Similarity=0.249 Sum_probs=200.9
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
..++|+++++||.|+||.||+|.. .+++.||+|+++..... ....+.+|+.++++++||||+++++++...+..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 467799999999999999999994 46899999998754322 3457889999999999999999999999989999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++ ++|.+++.. .+..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 83 e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 83 EYLD-SDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRK-ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT 159 (288)
T ss_pred eCCC-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence 9998 589888754 2345789999999999999999999999 999999999999999999999999998754322
Q ss_pred -CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-----------c---------
Q 012608 179 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------M--------- 236 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-----------~--------- 236 (460)
....+++.|+|||.+.+ ..++.++||||+||++|+|+||+.||.............. .
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 23457889999999875 4578999999999999999999999866433221110000 0
Q ss_pred cccccc----cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 LTDSCL----EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 ~~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...+.. .....+..+.++.+++.+||+.||.+|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 00112245678999999999999999999999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=320.33 Aligned_cols=251 Identities=22% Similarity=0.344 Sum_probs=212.9
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.+|++++.||.|+||.||+|...+++.+++|++..........+..|+.+++.++||||+++++++...+..++||||++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecc
Confidence 35788999999999999999977799999999987765567789999999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----Cc
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----SY 181 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----~~ 181 (460)
+++|.+++....+..+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++....... ..
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~ 164 (261)
T cd05148 86 KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN-SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDK 164 (261)
T ss_pred cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccCcceEEEcCCceEEEccccchhhcCCccccccCC
Confidence 999999997655667899999999999999999999999 9999999999999999999999999987654322 22
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
.++..|++||.+.+..++.++||||||+++++|++ |+.||............... .....+..+++.+.+++.+
T Consensus 165 ~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~ 239 (261)
T cd05148 165 KIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG-----YRMPCPAKCPQEIYKIMLE 239 (261)
T ss_pred CCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC-----CcCCCCCCCCHHHHHHHHH
Confidence 34678999999988889999999999999999998 78887654332222211111 1112345667899999999
Q ss_pred HcccCCCCCCChhHHHHHhccc
Q 012608 261 CLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~ 282 (460)
||+.+|.+|||+.++++.|+.+
T Consensus 240 ~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 240 CWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HcCCCchhCcCHHHHHHHHhcC
Confidence 9999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=331.94 Aligned_cols=237 Identities=20% Similarity=0.253 Sum_probs=198.5
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
+.||+|+||.||++.. .+|+.||+|+++.... .....+.+|+.+++.++||||+++++++...+..++||||++|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3579999999999994 5699999999875422 23456788999999999999999999999999999999999999
Q ss_pred CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCccC
Q 012608 108 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYST 183 (460)
Q Consensus 108 sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~~ 183 (460)
+|..++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....|
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 157 (323)
T cd05595 81 ELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccC
Confidence 99988863 457899999999999999999999999 99999999999999999999999998875322 134568
Q ss_pred CCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 012608 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263 (460)
Q Consensus 184 t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (460)
|+.|+|||.+.+..++.++|||||||++|+|++|+.||............... ...++..+++++.+++.+||+
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05595 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999998655433222211111 112455677899999999999
Q ss_pred cCCCCCC-----ChhHHHH
Q 012608 264 YEPRERP-----NPKSLVT 277 (460)
Q Consensus 264 ~~p~~Rp-----s~~~il~ 277 (460)
.||.+|+ ++.++++
T Consensus 232 ~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 232 KDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCHHHhCCCCCCCHHHHHc
Confidence 9999998 7888876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=318.57 Aligned_cols=250 Identities=21% Similarity=0.333 Sum_probs=209.7
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.++.+.+.||.|+||.||+|.. .+++.|++|++.... .....+.+|++++++++||||+++++++..++..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 4577888999999999999994 458999999987543 33567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----- 179 (460)
++++|.+++.......+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||++.......
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~ 163 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 163 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence 9999999987545567899999999999999999999999 9999999999999999999999999987654332
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...++..|+|||.+.+..++.++|||||||++|+|++ |..|++.............. .....+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li 238 (263)
T cd05052 164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-----YRMERPEGCPPKVYELM 238 (263)
T ss_pred CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCHHHHHHH
Confidence 1223567999999988889999999999999999998 88887664433322221111 12234556778999999
Q ss_pred HHHcccCCCCCCChhHHHHHhccc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
.+||+.+|++|||+.++++.|+.+
T Consensus 239 ~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 239 RACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHccCCcccCCCHHHHHHHHHhh
Confidence 999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-42 Score=316.20 Aligned_cols=248 Identities=22% Similarity=0.332 Sum_probs=204.6
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.++++++++||+|+||.||++...++..+|+|.+.... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 45688899999999999999998778899999886443 23568899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----- 179 (460)
+|++|.+++... .+.+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 82 ENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNS-FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred CCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 999999988642 346889999999999999999999999 9999999999999999999999999887543221
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...++..|+|||.+.+..++.++|+||||+++|+|++ |+.||................ ....+...+..+.+++
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~li 234 (256)
T cd05114 160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-----RLYRPKLASMTVYEVM 234 (256)
T ss_pred CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-----CCCCCCCCCHHHHHHH
Confidence 2234568999999988889999999999999999999 887876543322222111111 1112334567899999
Q ss_pred HHHcccCCCCCCChhHHHHHhc
Q 012608 259 SRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~ 280 (460)
.+||+.+|.+|||+.++++.|.
T Consensus 235 ~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 235 YSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred HHHccCCcccCcCHHHHHHhhC
Confidence 9999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=306.10 Aligned_cols=246 Identities=21% Similarity=0.243 Sum_probs=210.5
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCC--CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++..+||+|+|++||+.. ..+|+.+|+|++... ...+.+.+.+|++|.+.|+||||+++++.+...+..|+|+|+
T Consensus 12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~ 91 (355)
T KOG0033|consen 12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 91 (355)
T ss_pred hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEec
Confidence 47788899999999999987 567999999987543 233578999999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC---CCeEEccCCCcccCCCCC-
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~---~~~kl~DFg~a~~~~~~~- 179 (460)
|+|+.|..-+.. .--+++..+-..++||+++|.|+|.++ |||||+||.|+|+-.. --+||+|||++...+...
T Consensus 92 m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n~-IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~ 168 (355)
T KOG0033|consen 92 VTGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSNG-IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA 168 (355)
T ss_pred ccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcC-ceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence 999999765653 245788888999999999999999999 9999999999999533 348999999998877443
Q ss_pred --CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 180 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 180 --~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
...||+.|||||++...+++..+|||+.|++||-|+.|.+||.++....+.++....-.+ .++...+.++++..++
T Consensus 169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd--~~~~~w~~is~~Ak~L 246 (355)
T KOG0033|consen 169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD--YPSPEWDTVTPEAKSL 246 (355)
T ss_pred cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC--CCCcccCcCCHHHHHH
Confidence 457899999999999999999999999999999999999999997666666655444333 2233456788999999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
+++||..||.+|.|+.|.|+
T Consensus 247 vrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 247 IRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHHhccChhhhccHHHHhC
Confidence 99999999999999999987
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=333.78 Aligned_cols=246 Identities=17% Similarity=0.180 Sum_probs=198.6
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.+++++++++.||.|+||.||++.. .+|+.||||++....... ...+.+|+++++.++|+||+++++++..++..++|
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 4567788999999999999999994 468999999986543322 46789999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|||++|++|.+.. ...+..+..++.||+.||.|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 151 ~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 151 LEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH-IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred EecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 9999999986532 3567788899999999999999999 999999999999999999999999998765432
Q ss_pred --CCccCCCcccCcccccc-----CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 179 --KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~-----~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
....||..|+|||.+.. ...+.++|||||||++|+|++|+.||.......+....... ........+..++
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 301 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI--CMSQPPEAPATAS 301 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH--hccCCCCCCCccC
Confidence 34578999999998743 22456899999999999999999998632211111100000 0011123345677
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.++.+||.+||+.||++|||+.++++
T Consensus 302 ~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 302 REFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 89999999999999999999999998
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=322.91 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=207.5
Q ss_pred CcccchhcccCCCCCCeEEEEEEcC-C-----cEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLEN-Q-----RRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
+.++++++.||+|+||.||+|.... + ..|++|.++...... ...+.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 3468899999999999999998532 2 679999987544322 45689999999999999999999999988899
Q ss_pred EEEEEcCCCCCHHhhhhccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 163 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~ 163 (460)
+++|||+++++|.+++..... ..+++..++.++.|++.||.|||+++ ++|+||||+||++++++.
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccccceEEEcCCCc
Confidence 999999999999999864321 45788999999999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccc
Q 012608 164 PRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 236 (460)
Q Consensus 164 ~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 236 (460)
++|+|||++...... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||.+.............
T Consensus 163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~ 242 (283)
T cd05048 163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR 242 (283)
T ss_pred EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998754322 23345778999999988889999999999999999998 88888664433322221111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
.....+..++.++.+|+.+||+.||.+||++.++++.|+.+
T Consensus 243 -----~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 243 -----QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred -----CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 11223556789999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=325.35 Aligned_cols=248 Identities=19% Similarity=0.238 Sum_probs=200.1
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|++++.||+|+||.||+++.. +++.||+|+++..... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 5788999999999999999954 6889999998754322 256788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----- 178 (460)
++++++..+.. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKND-IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99877765543 3456899999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc--------------------ccccc
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------------LQMLT 238 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~--------------------~~~~~ 238 (460)
....+|..|+|||++.+..++.++|||||||++|+|++|+.||+........... .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 2346789999999998888999999999999999999999988754321110000 00000
Q ss_pred ccc------ccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 DSC------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 ~~~------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+. ........++.++.+++.+||+.||++|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 001112235778999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=311.51 Aligned_cols=252 Identities=20% Similarity=0.246 Sum_probs=204.0
Q ss_pred CcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCc-cceeeeEEeeCC-----
Q 012608 25 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGD----- 95 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~----- 95 (460)
+..|..+++||+|+||+||+|+ ..+|+.||+|++..... +......+|+.+++.|+|+| |+++++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 5667888899999999999999 66799999999976544 34667889999999999999 999999998877
Q ss_pred -eeEEEEEcCCCCCHHhhhhccCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCc
Q 012608 96 -ERLLVAEYMPNETLAKHLFHWET--HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 172 (460)
Q Consensus 96 -~~~lv~e~~~g~sL~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a 172 (460)
..++|+||++ .+|..++..... ..++...+..++.||+.||+|||+++ |+||||||+|||++++|.+||+|||+|
T Consensus 90 ~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~-IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 90 GKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG-ILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred ceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCcceEEECCCCcEeeeccchH
Confidence 7899999997 899999976442 35777899999999999999999999 999999999999999999999999999
Q ss_pred ccCCCC----CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccc-------
Q 012608 173 KNSRDG----KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------- 240 (460)
Q Consensus 173 ~~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~------- 240 (460)
+...-. ..-.+|..|+|||++.+. .|+...||||+||++.||++++..|++..........+..+..+
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence 866522 334578899999999887 58999999999999999999999898764422211111111100
Q ss_pred ----------cccCCCC-------chhHHHHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 241 ----------CLEGQFT-------DDDGTELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 241 ----------~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
.....-+ +...+...+++.+||+.+|..|.|+..++..
T Consensus 248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 0000001 1122578999999999999999999999883
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-43 Score=297.79 Aligned_cols=257 Identities=18% Similarity=0.192 Sum_probs=209.8
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeC-----Ce
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DE 96 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 96 (460)
-|=++|+|.++||+|||+-||++. ..+++.+|+|++......+.+...+|++..++++||||++++++...+ ..
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 355789999999999999999999 788999999999887777788999999999999999999999886543 34
Q ss_pred eEEEEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 97 RLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
.|+++.|...|||.+.+... ++..+++.+++.|+.+|++||++||+.. +++||||||.|||+++.+.++|.|||.+.
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 89999999999999988753 3457999999999999999999999976 59999999999999999999999999887
Q ss_pred cCCCC-------------CCccCCCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc-
Q 012608 174 NSRDG-------------KSYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM- 236 (460)
Q Consensus 174 ~~~~~-------------~~~~~t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~- 236 (460)
...-. ..-..|..|+|||.+. +...+.++|||||||++|.|+.|..||..... .+....
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----~GgSlaL 253 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----QGGSLAL 253 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh----cCCeEEE
Confidence 54321 1235689999999985 34578899999999999999999999854321 111111
Q ss_pred -cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 237 -LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 237 -~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
.........-....++.+.+++.+||+.||.+||++.+++..++.+.
T Consensus 254 Av~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 254 AVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 11111111111237789999999999999999999999999887663
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=329.81 Aligned_cols=250 Identities=20% Similarity=0.247 Sum_probs=202.0
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.+|++++.||.|+||.||++... +|..+|+|.+...... ....+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 56889999999999999999954 6889999988765322 245789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC--CCCc
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY 181 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~--~~~~ 181 (460)
++|++|.+++.. .+.+++..+..++.|++.||.|||+.++++|+||||+|||+++++.+||+|||++..... ....
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 162 (333)
T cd06650 85 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (333)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence 999999999863 456889999999999999999999853399999999999999999999999999875433 2345
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc---------------------------
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------------------- 234 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------------------- 234 (460)
.++..|+|||++.+..++.++|||||||++|+|++|+.||.............
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
T cd06650 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG 242 (333)
T ss_pred CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence 68899999999988889999999999999999999999886543221110000
Q ss_pred -------------cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 -------------QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 -------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
................+.++.+|+.+||+.||++|||+.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 243 PDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred ccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0000000000011134678999999999999999999999986
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=345.78 Aligned_cols=247 Identities=17% Similarity=0.196 Sum_probs=205.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cC-CcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-EN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+..|.+.+.||+|+||.||++.. .+ +..||+|.+..........+.+|+.+++.++||||+++++++..++..++|||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 34489999999999999999983 34 67899998765544445578889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 103 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|++|++|.+++... ...++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK-MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999999877532 3456889999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 179 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.......+......... ...+..++.++
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~ 299 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-----DPFPCPVSSGM 299 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCccCCHHH
Confidence 344689999999999988899999999999999999999999876543322222111111 12334567899
Q ss_pred HHHHHHHcccCCCCCCChhHHHH
Q 012608 255 VRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.++|.+||..+|+.||++.+++.
T Consensus 300 ~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 300 KALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHHhccChhhCcCHHHHHh
Confidence 99999999999999999999875
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=336.98 Aligned_cols=245 Identities=16% Similarity=0.144 Sum_probs=200.2
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||.|+||.||++.. .+|+.||||++.... ......+.+|+.++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 578899999999999999995 469999999997532 2234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++|++|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLG-YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999999999863 457999999999999999999999999 999999999999999999999999988643211
Q ss_pred --------------------------------------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCC
Q 012608 179 --------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI 220 (460)
Q Consensus 179 --------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p 220 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 123589999999999888899999999999999999999999
Q ss_pred CCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCC---hhHHHH
Q 012608 221 PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 277 (460)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps---~~~il~ 277 (460)
|..................... .....+++++.++|.+|+. +|.+|++ +.++++
T Consensus 239 f~~~~~~~~~~~i~~~~~~~~~--~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 239 FCSDNPQETYRKIINWKETLQF--PDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCHHHHHHHHHcCCCccCC--CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 8765433222111111000000 0112457889999999997 9999987 888876
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=323.60 Aligned_cols=247 Identities=16% Similarity=0.219 Sum_probs=203.6
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
|++++.||+|+||.||++.. .+++.||+|++...... ....+.+|+.++++++||||+++++.+..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 67788899999999999994 56899999998654322 234578899999999999999999999998999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 180 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~ 180 (460)
++|++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER-IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 99999998886544557999999999999999999999999 999999999999999999999999998765433 23
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..|+..|+|||++.+..++.++||||+||++|+|++|..||.+.............+.. ....++..++..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHH
Confidence 46789999999998888999999999999999999999998754332111111111111 1123445577899999999
Q ss_pred HcccCCCCCC-----ChhHHHH
Q 012608 261 CLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rp-----s~~~il~ 277 (460)
||..||++|| ++.++++
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhc
Confidence 9999999999 7778876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-42 Score=327.46 Aligned_cols=238 Identities=20% Similarity=0.277 Sum_probs=198.3
Q ss_pred hcccCCCCCCeEEEEEE----cCCcEEEEEEecCCC----CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 31 VSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
++.||+|+||.||+++. .+++.||+|+++... ......+..|+.+++.++||||+++++++..++..|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 36789999999999984 358899999987532 1224567899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----C
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~ 178 (460)
|++|++|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.... .
T Consensus 81 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLER--EGIFMEDTACFYLSEISLALEHLHQQG-IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcc
Confidence 9999999998863 456888999999999999999999999 99999999999999999999999999864322 2
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++..+++.+.+++
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li 231 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG------KLNLPPYLTPEARDLL 231 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHH
Confidence 2346899999999998888899999999999999999999998765433222221111 1134556778999999
Q ss_pred HHHcccCCCCCC-----ChhHHHH
Q 012608 259 SRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rp-----s~~~il~ 277 (460)
.+||+.+|++|| ++.++++
T Consensus 232 ~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 232 KKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHcccCHhHcCCCCCCCHHHHhc
Confidence 999999999999 7888776
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=333.52 Aligned_cols=241 Identities=20% Similarity=0.296 Sum_probs=211.2
Q ss_pred hcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCe
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 96 (460)
.-+..+++++++||+|+||.|+++.. .+++.+|||++++.. .++.+....|.+|+... +||.++.++.+|...+.
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 44566788999999999999999994 468999999998764 34577888999999888 59999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
+|+||||+.||++..++ ....+++..+.-++..|+.||.|||++| ||+||||.+|||+|.+|.+||+|||+++..-
T Consensus 444 l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~-IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG-IIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC-ceeeecchhheEEcccCcEEecccccccccC
Confidence 99999999999854433 4578999999999999999999999999 9999999999999999999999999998532
Q ss_pred ----CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 177 ----DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 177 ----~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
...+++||+.|||||++.+..|+.+.|.|||||++|||+.|..||+++..+.+-+.....- ..+|..++.
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~------~~yP~~ls~ 593 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE------VRYPRFLSK 593 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC------CCCCCcccH
Confidence 3468899999999999999999999999999999999999999999887766655544332 246778889
Q ss_pred HHHHHHHHHcccCCCCCCCh
Q 012608 253 ELVRLASRCLQYEPRERPNP 272 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~ 272 (460)
+...|++++|+.+|++|--+
T Consensus 594 ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 594 EAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHHHhccCcccccCC
Confidence 99999999999999999643
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-42 Score=335.30 Aligned_cols=247 Identities=18% Similarity=0.179 Sum_probs=199.0
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+.|++++.||+|+||+||+|. ..+++.||||++..... .....+.+|+.++++++||||+++++++..++..++||
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 357889999999999999998 45689999999965432 22457889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 177 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~---- 177 (460)
||++||+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 81 DYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMG-FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 99999999998863 456889999999999999999999999 99999999999999999999999998753210
Q ss_pred -----------------------------------------------CCCccCCCcccCccccccCCCCCCCceehHHHH
Q 012608 178 -----------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 210 (460)
Q Consensus 178 -----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~ 210 (460)
.....||+.|+|||.+.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 013468999999999988889999999999999
Q ss_pred HHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc--ccCCCCCCChhHHHH
Q 012608 211 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL--QYEPRERPNPKSLVT 277 (460)
Q Consensus 211 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l--~~~p~~Rps~~~il~ 277 (460)
+|||+||..||................. .........+++++.+++.+|+ ..+|..||++.+++.
T Consensus 238 l~elltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTETQLKVINWEN--TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHHHhCCCCCcCCCHHHHHHHHHcccc--ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 9999999999876443222211111000 0111112246788999999855 455556999999997
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=334.83 Aligned_cols=245 Identities=20% Similarity=0.231 Sum_probs=204.1
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||+|+||.||++.. .+|+.||||+++... ......+..|+.++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 578899999999999999995 469999999987542 1235678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC---
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~--- 179 (460)
|++|++|.+++.. .+.+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLG-FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999999874 367999999999999999999999999 9999999999999999999999999987644322
Q ss_pred ------------------------------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh
Q 012608 180 ------------------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 229 (460)
Q Consensus 180 ------------------------------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~ 229 (460)
...||+.|+|||.+.+..++.++|||||||++|+|++|+.||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 34578999999999988899999999999999999999999876543322
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCC-hhHHHH
Q 012608 230 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN-PKSLVT 277 (460)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps-~~~il~ 277 (460)
............. .....+++++.++|.+||. +|.+||+ +.++++
T Consensus 239 ~~~i~~~~~~~~~--p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 239 YNKIINWKESLRF--PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred HHHHhccCCcccC--CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 2222111010011 1112257899999999997 9999999 999987
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=329.67 Aligned_cols=241 Identities=22% Similarity=0.309 Sum_probs=203.9
Q ss_pred chhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCH---HHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 29 NIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.=++.||.|+||.||.++ ..+...||||++.-+..... ..+..||..|+++.|||++.+.|+|..+...|+|||||
T Consensus 29 ~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC 108 (948)
T KOG0577|consen 29 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC 108 (948)
T ss_pred HHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH
Confidence 346889999999999999 56789999999976655543 46899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCccCC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN 184 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~~t 184 (460)
- ||-.|++.- -.+++.+.++..|..+.+.||+|||+.+ .||||||..|||+++.|.|||+|||.+....+..+++||
T Consensus 109 l-GSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~-~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGT 185 (948)
T KOG0577|consen 109 L-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGT 185 (948)
T ss_pred h-ccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhh-HHhhhccccceEecCCCeeeeccccchhhcCchhcccCC
Confidence 7 777887754 3468999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred CcccCcccccc---CCCCCCCceehHHHHHHHHhhCCCCCCCh-hhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 185 LAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 185 ~~y~aPE~~~~---~~~~~~sDi~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
|.|||||++.. +.|+-+.||||||+++.||...++|.... ....+.. +.+...+.+ .....+..|+.|+..
T Consensus 186 PywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYH--IAQNesPtL---qs~eWS~~F~~Fvd~ 260 (948)
T KOG0577|consen 186 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH--IAQNESPTL---QSNEWSDYFRNFVDS 260 (948)
T ss_pred ccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHH--HHhcCCCCC---CCchhHHHHHHHHHH
Confidence 99999999853 56999999999999999999999775433 2222111 111111111 134667899999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
||++-|.+|||.+++++
T Consensus 261 CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 261 CLQKIPQERPTSEELLK 277 (948)
T ss_pred HHhhCcccCCcHHHHhh
Confidence 99999999999988775
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-42 Score=327.93 Aligned_cols=240 Identities=20% Similarity=0.287 Sum_probs=198.0
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHH---hcCCCCccceeeeEEeeCCeeEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSV---GQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
|++++.||+|+||.||++.. .+|+.||||+++... ....+.+.+|+.++ +.++||||+++++++..++..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56789999999999999984 569999999997542 22245677776665 566899999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC---
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 177 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~--- 177 (460)
|||++|++|...+. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENK-IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999998874 457999999999999999999999999 99999999999999999999999998865322
Q ss_pred -CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 178 -GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 178 -~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
.....|++.|+|||.+.+..++.++|||||||++|+|++|+.||............... ...++..++..+.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ 230 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSREAIS 230 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHH
Confidence 23456899999999999888999999999999999999999998765433322221111 11244567789999
Q ss_pred HHHHHcccCCCCCC-----ChhHHHH
Q 012608 257 LASRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rp-----s~~~il~ 277 (460)
++.+||+.||.+|| ++.++++
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 99999999999999 4666665
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=330.63 Aligned_cols=237 Identities=22% Similarity=0.258 Sum_probs=198.7
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
+.||+|+||.||++.. .+|+.||+|+++.... .....+..|++++..++||||+++++++...+..++||||++|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3579999999999984 5799999999875422 23456788999999999999999999999999999999999999
Q ss_pred CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 108 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 108 sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
+|.+++.. ...+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++.... .....
T Consensus 81 ~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~-ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (325)
T cd05594 81 ELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC 157 (325)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccccc
Confidence 99988863 4578999999999999999999997 68 99999999999999999999999999865322 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||++.+..++.++|||||||++|+|+||..||............... ...++...++++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L 231 (325)
T cd05594 158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLSGLL 231 (325)
T ss_pred CCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHh
Confidence 899999999999888999999999999999999999998765443322221111 11245567789999999999
Q ss_pred ccCCCCCC-----ChhHHHH
Q 012608 263 QYEPRERP-----NPKSLVT 277 (460)
Q Consensus 263 ~~~p~~Rp-----s~~~il~ 277 (460)
+.||++|+ ++.++++
T Consensus 232 ~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 232 KKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred hcCHHHhCCCCCCCHHHHhc
Confidence 99999996 8888886
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=334.14 Aligned_cols=245 Identities=14% Similarity=0.119 Sum_probs=197.9
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||+|+||+||++.. .+|+.||||+++.... .....+.+|+.++.+++||||+++++.+...+..++|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 578899999999999999984 4689999999865321 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++||+|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~g-ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLG-FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 9999999999863 467999999999999999999999999 999999999999999999999999998643211
Q ss_pred -----------------------------------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCC
Q 012608 179 -----------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 223 (460)
Q Consensus 179 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~ 223 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 134689999999999988899999999999999999999999976
Q ss_pred hhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCC---CCCChhHHHH
Q 012608 224 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR---ERPNPKSLVT 277 (460)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~---~Rps~~~il~ 277 (460)
...................+. ...+++++.+++.+|+. +|. .||++.++++
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPP--EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCC--cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhC
Confidence 544332222211101111111 11356788899988664 344 4589999987
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-42 Score=334.62 Aligned_cols=246 Identities=17% Similarity=0.188 Sum_probs=200.7
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
++|++++.||+|+||.||++. ..+|+.||||++.... ......+.+|+.++++++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 468899999999999999999 4569999999986432 223567889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 177 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~---- 177 (460)
||++|++|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 99999999999863 456889999999999999999999999 99999999999999999999999998742210
Q ss_pred -------------------------------------------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHH
Q 012608 178 -------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214 (460)
Q Consensus 178 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el 214 (460)
.....||+.|+|||++.+..++.++|||||||++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0124689999999999988899999999999999999
Q ss_pred hhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCC---ChhHHHH
Q 012608 215 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP---NPKSLVT 277 (460)
Q Consensus 215 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp---s~~~il~ 277 (460)
++|+.||................ ..........+++++.+++.+|+ .+|.+|+ ++.++++
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINWE--TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhccC--ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 99999997654332222111100 01111112346788999999977 5999999 8888886
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=314.37 Aligned_cols=250 Identities=22% Similarity=0.333 Sum_probs=208.6
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
..+++.+.||.|++|.||+|...+++.||+|.++... ...+.+.+|+.++++++||||+++++++...+..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 4578889999999999999997778899999987544 245779999999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC--C---
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--S--- 180 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~--~--- 180 (460)
|++|.+++....+..+++..+..++.|++.||.+||+++ ++|+||||+||+++.++.++|+|||++....... .
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG 163 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCC
Confidence 999999997544457899999999999999999999999 9999999999999999999999999987654321 1
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...+..|+|||.+.+..++.++||||||+++++|+| |+.||................ ....+...+..+.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 238 (261)
T cd05068 164 AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-----RMPCPPGCPKELYDIML 238 (261)
T ss_pred CcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-----CCCCCCcCCHHHHHHHH
Confidence 122357999999988889999999999999999999 888876544332222111111 11223456789999999
Q ss_pred HHcccCCCCCCChhHHHHHhccc
Q 012608 260 RCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+||+.+|.+||++.++++.|+.+
T Consensus 239 ~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 239 DCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHhhcCcccCCCHHHHHHHHhcC
Confidence 99999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-42 Score=334.33 Aligned_cols=266 Identities=21% Similarity=0.281 Sum_probs=211.9
Q ss_pred CCCCCccccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHh
Q 012608 5 DGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVG 77 (460)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~ 77 (460)
.++|.-.+|.+.. ..+.+++.||+|+||.||+|+.. .+..||||+++..... ..+.+.+|+.+++
T Consensus 24 ~~~~~~~~~~~~~--------~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~ 95 (400)
T cd05105 24 MQLPYDSRWEFPR--------DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMT 95 (400)
T ss_pred ccCCCCCceeccc--------cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHH
Confidence 3456556666654 57889999999999999999842 1346999999754432 2467999999999
Q ss_pred cCC-CCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccC---------------------------------------
Q 012608 78 QLR-NNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE--------------------------------------- 117 (460)
Q Consensus 78 ~l~-h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~--------------------------------------- 117 (460)
++. ||||+++++++...+..++||||++||+|.+++....
T Consensus 96 ~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (400)
T cd05105 96 HLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKG 175 (400)
T ss_pred hcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccc
Confidence 995 9999999999999999999999999999998875321
Q ss_pred -------------------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHh
Q 012608 118 -------------------------------------------------------THPMKWAMRLRVVLHLAQALEYCTS 142 (460)
Q Consensus 118 -------------------------------------------------------~~~~~~~~~~~i~~qi~~~l~~lH~ 142 (460)
...+++..+..++.|++.||.|||+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~ 255 (400)
T cd05105 176 DYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS 255 (400)
T ss_pred cccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1247788889999999999999999
Q ss_pred CCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh
Q 012608 143 KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 216 (460)
Q Consensus 143 ~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t 216 (460)
.+ |+|+||||+|||++.++.+||+|||+++..... ....++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 256 ~~-ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 334 (400)
T cd05105 256 KN-CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334 (400)
T ss_pred CC-eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHH
Confidence 99 999999999999999999999999998754332 22345678999999988889999999999999999997
Q ss_pred -CCCCCCChhhhhh-hhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 217 -GKHIPPSHALDLI-RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 217 -g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
|..||+....... ....... .....+..++.++.+++.+||+.+|++|||+.++.+.|+.+.+
T Consensus 335 ~g~~P~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 335 LGGTPYPGMIVDSTFYNKIKSG-----YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred CCCCCCcccchhHHHHHHHhcC-----CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 8888765432211 1111111 1112344567899999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=319.11 Aligned_cols=251 Identities=23% Similarity=0.357 Sum_probs=205.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE-----cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
++++++.++||+|+||.||+|.. .++..|++|.++..... ....+.+|+.++++++||||+++++++..++..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 56788999999999999999983 24678999998754322 2357889999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWE---------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 163 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~---------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~ 163 (460)
++|||+++++|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF-FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC-eehhccccceEEEcCCCc
Confidence 9999999999999885321 234788899999999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccc
Q 012608 164 PRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 236 (460)
Q Consensus 164 ~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 236 (460)
+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+.............
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 242 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998764322 23344678999999988889999999999999999998 88777654332222221111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcc
Q 012608 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~ 281 (460)
. ....+..+++.+.+++.+||+.+|.+||++.++++.|..
T Consensus 243 ~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 243 Q-----LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred C-----cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 112345567899999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-42 Score=332.99 Aligned_cols=251 Identities=16% Similarity=0.161 Sum_probs=205.0
Q ss_pred hcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
..+..+|++++.||+|+||.||++.. .+|+.||+|++.... ......+.+|+.+++.++||||+++++++..++..
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 34567789999999999999999995 468999999986432 22345678999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||++||+|.+++. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 119 YMVMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999999885 346889999999999999999999999 99999999999999999999999999876543
Q ss_pred C-----CCccCCCcccCccccccC----CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCc
Q 012608 178 G-----KSYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 178 ~-----~~~~~t~~y~aPE~~~~~----~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
. ....||+.|+|||.+.+. .++.++|||||||++|+|++|..||..................... ....
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~ 272 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTF--PDDI 272 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCC--CCcC
Confidence 2 245689999999998653 3788999999999999999999998765443322222111111111 1112
Q ss_pred hhHHHHHHHHHHHcccCCCC--CCChhHHHHH
Q 012608 249 DDGTELVRLASRCLQYEPRE--RPNPKSLVTA 278 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~--Rps~~~il~~ 278 (460)
.++.++.+++.+||+.+|.+ |+|+.++++.
T Consensus 273 ~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 273 EISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 46789999999999999988 9999999873
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-42 Score=333.61 Aligned_cols=244 Identities=16% Similarity=0.145 Sum_probs=197.9
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|.+++.||.|+||.||++. ..+|+.||||++.... ......+.+|++++++++||||+++++++..++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 57889999999999999998 4579999999986432 1224578899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++|++|.+++.. .+.+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLG-FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 9999999998863 457899999999999999999999999 999999999999999999999999998532110
Q ss_pred -----------------------------------------------CCccCCCcccCccccccCCCCCCCceehHHHHH
Q 012608 179 -----------------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLL 211 (460)
Q Consensus 179 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l 211 (460)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 023588999999999888899999999999999
Q ss_pred HHHhhCCCCCCChhhhhhhhccccccccccccCCCC--chhHHHHHHHHHHHcccCCCCC---CChhHHHHH
Q 012608 212 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRER---PNPKSLVTA 278 (460)
Q Consensus 212 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~R---ps~~~il~~ 278 (460)
|||++|..||.................. ..++ ..++.++.+++.+||. +|.+| +|+.+++..
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~----~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIINWRET----LYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHccCCc----cCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 9999999998654332221111110000 0111 1356889999999998 67765 599998873
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-42 Score=324.42 Aligned_cols=249 Identities=19% Similarity=0.229 Sum_probs=196.3
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.+|++++.||.|+||.||+|... +|+.||||+++..... ....+.+|+.+++.++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 56889999999999999999954 6899999998754322 245678999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
++ ++|.+++.. ..+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRY-ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 97 678777754 3456889999999999999999999999 999999999999999999999999998654321 2
Q ss_pred CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhh--hhhhcc--c--------------cccccc
Q 012608 180 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDRN--L--------------QMLTDS 240 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~--~~~~~~--~--------------~~~~~~ 240 (460)
...+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+.... .+.... . ......
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 34578999999998654 4788999999999999999999998653110 000000 0 000000
Q ss_pred cccCCCC---------chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 241 CLEGQFT---------DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 241 ~~~~~~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......+ ...+..+.+++.+||+.||++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000001 113467889999999999999999999987
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=319.34 Aligned_cols=253 Identities=21% Similarity=0.274 Sum_probs=206.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
++++++++++||.|+||.||+|... .++.||+|+++...... .+.+.+|+.++..++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 4567899999999999999999843 25789999987544322 4568899999999999999999999999899
Q ss_pred eEEEEEcCCCCCHHhhhhcc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC
Q 012608 97 RLLVAEYMPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 162 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~ 162 (460)
.++++||+++++|.+++... ....+++..+..++.|++.||.|||+++ ++||||||+||++++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g-i~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH-VVHKDLATRNVLVFDKL 161 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhheEecCCC
Confidence 99999999999999988521 1235788889999999999999999999 99999999999999999
Q ss_pred CeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccc
Q 012608 163 NPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 235 (460)
Q Consensus 163 ~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 235 (460)
.+||+|||+++..... ....+++.|+|||.+.++.++.++|||||||++|||++ |..|+.+.....+......
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN 241 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 9999999998754322 22344678999999988889999999999999999998 7667655433322222111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
.. ....+..++..+.+++.+||+.+|.+||++.+++..|+.+
T Consensus 242 ~~-----~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~ 283 (283)
T cd05091 242 RQ-----VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRTW 283 (283)
T ss_pred CC-----cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhCC
Confidence 11 1123456778999999999999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=318.35 Aligned_cols=249 Identities=22% Similarity=0.320 Sum_probs=205.9
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
.+|.+++.||+|+||.||+|... +++.||+|.++..... ..+.+.+|++++++++||||+++++++..++..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 45788999999999999999853 2578999998765544 3568999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEE
Q 012608 99 LVAEYMPNETLAKHLFHWE------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 166 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl 166 (460)
+||||++|++|.+++.... ...+++..+..++.|++.|+.|||+++ ++||||||+||+++.++.++|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~kl 163 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH-FVHRDLATRNCLVGYDLVVKI 163 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eeccccccceEEEcCCCeEEE
Confidence 9999999999999986432 245788999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccc
Q 012608 167 STFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTD 239 (460)
Q Consensus 167 ~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 239 (460)
+|||++...... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||...............
T Consensus 164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~--- 240 (280)
T cd05049 164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG--- 240 (280)
T ss_pred CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---
Confidence 999998754221 22334678999999998889999999999999999998 99887654333222221111
Q ss_pred ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
.....+...+..+.+++.+||+.||.+||++.++++.|+
T Consensus 241 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 241 --RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 111233456789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=341.20 Aligned_cols=252 Identities=18% Similarity=0.173 Sum_probs=210.4
Q ss_pred cccchhcccCCCCCCeEEEEEEcCC-cEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CCccceeeeE-Eee---C---Ce
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQ-RRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGC-CCE---G---DE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~-~~~---~---~~ 96 (460)
-..+|.+.|.+|||+.||+|....+ ..||+|++-.....+.+.+.+||++|++|+ |+|||.+++. ... . -.
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 3467889999999999999996554 999999998776667888999999999995 9999999993 221 1 24
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
++|.||||.||.|-|++..+....|++.++++|++++|.|+++||... +|||||||-+||||+.+|..||||||.+...
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 679999999999999998766667999999999999999999999976 6999999999999999999999999987643
Q ss_pred CCCC-------------CccCCCcccCcccc---ccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccc
Q 012608 176 RDGK-------------SYSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239 (460)
Q Consensus 176 ~~~~-------------~~~~t~~y~aPE~~---~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 239 (460)
-... ....|+.|+|||.+ .+.+.+.|+|||+|||+||-|+....||.......+....+.-.
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P-- 274 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFP-- 274 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCC--
Confidence 2211 23468999999987 55678999999999999999999999998765444444433211
Q ss_pred ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
..+..+..+..||..||+.||.+||++.+++..+..+...
T Consensus 275 ------~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 275 ------PFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ------CCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 1246788999999999999999999999999988777654
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=320.25 Aligned_cols=249 Identities=20% Similarity=0.248 Sum_probs=196.4
Q ss_pred ccchhcccCCCCCCeEEEEEE-c-CCcEEEEEEecCCCCC--CHHHHHHHHHHHhcC---CCCccceeeeEEee-----C
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-E-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL---RNNRLTNLLGCCCE-----G 94 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~-----~ 94 (460)
.|++++.||+|+||.||+|.. . +|+.||+|+++..... ....+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 578899999999999999985 3 4788999998754322 234667788877766 69999999999852 3
Q ss_pred CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
...++||||++ ++|.+++.......+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~-iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 46899999997 68999887555566899999999999999999999999 99999999999999999999999999876
Q ss_pred CCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc--------------c
Q 012608 175 SRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------L 237 (460)
Q Consensus 175 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------------~ 237 (460)
.... ....+|+.|+|||.+.+..++.++|||||||++|+|++|+.||.+............. .
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 5432 3446789999999998888999999999999999999999888654321111110000 0
Q ss_pred ccc-------cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 TDS-------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 ~~~-------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
... .......+.++..+.+++.+||+.||++|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000 0000122346678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-42 Score=326.89 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=197.6
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCC-CccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~ 101 (460)
+|++++.||+|+||.||+|.. .+++.||||+++... ....+.+..|+.++..++| ++|+.+++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 478899999999999999994 458899999987532 2335678899999999966 56888999999899999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 177 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~---- 177 (460)
||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 99999999998863 456899999999999999999999999 99999999999999999999999998864321
Q ss_pred CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 178 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 178 ~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...++++.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~l 231 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSI 231 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHH
Confidence 23456899999999999888999999999999999999999998765433322222111 123455677899999
Q ss_pred HHHHcccCCCCCCCh
Q 012608 258 ASRCLQYEPRERPNP 272 (460)
Q Consensus 258 i~~~l~~~p~~Rps~ 272 (460)
+.+||..||.+|++.
T Consensus 232 i~~~l~~~P~~R~~~ 246 (324)
T cd05587 232 CKGLLTKHPAKRLGC 246 (324)
T ss_pred HHHHhhcCHHHcCCC
Confidence 999999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=313.34 Aligned_cols=250 Identities=24% Similarity=0.328 Sum_probs=205.4
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
..|++.++||+|+||.||+|...++..||+|+++... ...+.+.+|++++++++||||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 4588999999999999999997666789999987533 24567999999999999999999999874 456899999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----C
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 180 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-----~ 180 (460)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||.+....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence 999999997544456889999999999999999999999 9999999999999999999999999987654322 2
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..++..|+|||...+..++.++|||||||++|+|+| |..||................ ....+..++..+.+++.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~ 237 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-----RMPCPPECPESLHDLMC 237 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-----CCCCccccCHHHHHHHH
Confidence 335678999999988889999999999999999999 776775543332222111111 11223456788999999
Q ss_pred HHcccCCCCCCChhHHHHHhcccc
Q 012608 260 RCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
+||+.+|.+||++.++++.|+.+.
T Consensus 238 ~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 238 QCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred HHccCCcccCCCHHHHHHHHHHhc
Confidence 999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=312.47 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=204.4
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..+|.+++.||+|+||.||.+...++..+|+|.+.... .....+.+|+.++++++||||+++++++...+..+++|||+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 35688999999999999999997777789999987543 23567999999999999999999999999888899999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----- 179 (460)
++++|.+++... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||.++......
T Consensus 82 ~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05113 82 SNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQ-FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV 159 (256)
T ss_pred CCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence 999999998642 336899999999999999999999999 9999999999999999999999999887543322
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...++..|++||.+.+..++.++||||||+++|+|++ |..||.................. ..+...+..+.+++
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li 234 (256)
T cd05113 160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL-----YRPHLASEKVYAIM 234 (256)
T ss_pred CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC-----CCCCCCCHHHHHHH
Confidence 2234567999999988889999999999999999999 88777544332222222111111 12234568999999
Q ss_pred HHHcccCCCCCCChhHHHHHhc
Q 012608 259 SRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~ 280 (460)
.+||..+|.+|||+.++++.|+
T Consensus 235 ~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 235 YSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHcCCCcccCCCHHHHHHhhC
Confidence 9999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=312.75 Aligned_cols=249 Identities=24% Similarity=0.348 Sum_probs=207.1
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
..|+++++||+|+||.||+|...+++.||+|.+..... ....+.+|+.++++++||||+++++++. .+..+++|||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 35788999999999999999987889999999875443 4578999999999999999999999874 567899999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----CC
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 180 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~~ 180 (460)
+++|.+++....+..+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||++...... ..
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG 162 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence 999999987655667899999999999999999999999 999999999999999999999999998765422 12
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..++..|+|||.+.+..++.++||||||++++++++ |+.||................ ....+...+.++.+++.
T Consensus 163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 237 (260)
T cd05067 163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY-----RMPRPDNCPEELYELMR 237 (260)
T ss_pred CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC-----CCCCCCCCCHHHHHHHH
Confidence 334678999999988889999999999999999999 888886543322222111111 11233456688999999
Q ss_pred HHcccCCCCCCChhHHHHHhccc
Q 012608 260 RCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+||..+|++|||+++++..|+.+
T Consensus 238 ~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 238 LCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred HHccCChhhCCCHHHHHHHhhcC
Confidence 99999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=312.31 Aligned_cols=248 Identities=24% Similarity=0.356 Sum_probs=205.9
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.+|+++++||+|+||.||++...++..||+|.++.... ..+.+.+|+.++++++||||+++++++. .+..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46889999999999999999987888899999876443 3567999999999999999999999875 456899999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----C
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 180 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-----~ 180 (460)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEEeCCceEEeCCceeeeeccCcccccccC
Confidence 999999987544556899999999999999999999999 9999999999999999999999999987654321 2
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..++..|+|||.+.+..++.++|+||||+++|+|++ |..||............... .....+...+..+.+++.
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 237 (260)
T cd05070 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-----YRMPCPQDCPISLHELML 237 (260)
T ss_pred CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHH
Confidence 234567999999988889999999999999999999 77777654332222211111 111234566789999999
Q ss_pred HHcccCCCCCCChhHHHHHhcc
Q 012608 260 RCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~ 281 (460)
+||..+|++|||+.++.+.|+.
T Consensus 238 ~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 238 QCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=323.78 Aligned_cols=237 Identities=20% Similarity=0.279 Sum_probs=195.2
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||.||+|.. .+++.||+|+++... ....+.+..|..++..+ +||||+++++++..++..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3589999999999995 468899999987532 22345566777777755 899999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..... .....
T Consensus 81 g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKG-IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc
Confidence 999998863 457899999999999999999999999 99999999999999999999999999875422 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||++.+..++.++|||||||++|+|++|..||.+............. ...++..++.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~ll~~~l 231 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND------RPHFPRWISKEAKDCLSKLF 231 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHc
Confidence 899999999999888999999999999999999999998765443332221111 12344567789999999999
Q ss_pred ccCCCCCCChh-HHHH
Q 012608 263 QYEPRERPNPK-SLVT 277 (460)
Q Consensus 263 ~~~p~~Rps~~-~il~ 277 (460)
+.+|.+||++. ++++
T Consensus 232 ~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 232 ERDPTKRLGVDGDIRQ 247 (316)
T ss_pred cCCHHHcCCChHHHHc
Confidence 99999999875 4543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-42 Score=325.62 Aligned_cols=232 Identities=22% Similarity=0.277 Sum_probs=194.5
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||.||++.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++...+..++||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3589999999999995 468999999987532 23356678899998877 799999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....
T Consensus 81 g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~-ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (320)
T cd05590 81 GDLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC 157 (320)
T ss_pred chHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccc
Confidence 999988863 457899999999999999999999999 99999999999999999999999999875321 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||.+.+..++.++|||||||++|+|++|+.||............... ....+...+.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~L 231 (320)
T cd05590 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLSQDAVDILKAFM 231 (320)
T ss_pred cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHc
Confidence 899999999999888999999999999999999999998765443333222211 11234456789999999999
Q ss_pred ccCCCCCCCh
Q 012608 263 QYEPRERPNP 272 (460)
Q Consensus 263 ~~~p~~Rps~ 272 (460)
+.||.+||++
T Consensus 232 ~~dP~~R~~~ 241 (320)
T cd05590 232 TKNPTMRLGS 241 (320)
T ss_pred ccCHHHCCCC
Confidence 9999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=328.44 Aligned_cols=246 Identities=18% Similarity=0.229 Sum_probs=198.5
Q ss_pred ccchhcccCCCCCCeEEEEEE----cCCcEEEEEEecCCC----CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 27 VENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
+|++++.||+|+||.||++.. .+|+.||+|++.... ....+.+..|+.+++++ +||||+.+++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477899999999999999874 358899999986432 12345688999999999 599999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLG-IVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 999999999999998863 456899999999999999999999999 99999999999999999999999999875432
Q ss_pred C-----CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 178 G-----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 178 ~-----~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
. ....||+.|+|||.+.+.. ++.++|||||||++|+|+||..||.................. ....++..++
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIG 235 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCC
Confidence 2 2456899999999997654 788999999999999999999998543211110000000000 1123445677
Q ss_pred HHHHHHHHHHcccCCCCCC-----ChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rp-----s~~~il~ 277 (460)
+.+.+++.+||+.||++|| +++++++
T Consensus 236 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 236 PEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 8999999999999999999 6667775
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=330.24 Aligned_cols=243 Identities=17% Similarity=0.176 Sum_probs=194.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
-..|++++.||+|+||.||++.. .+++.||+|... ...+.+|++++++++||||+++++++..+...++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 35699999999999999999994 568999999753 24578999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-----G 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~-----~ 178 (460)
+. ++|..++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .
T Consensus 165 ~~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~-IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 240 (391)
T PHA03212 165 YK-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENR-IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKY 240 (391)
T ss_pred CC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHhEEEcCCCCEEEEeCCccccccccccccc
Confidence 96 788887753 456889999999999999999999999 99999999999999999999999999864322 1
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh--------hhh---hhc-c-------------
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--------DLI---RDR-N------------- 233 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~--------~~~---~~~-~------------- 233 (460)
....||+.|+|||++.+..++.++|||||||++|+|+||..|+..... ..+ ... .
T Consensus 241 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~ 320 (391)
T PHA03212 241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN 320 (391)
T ss_pred ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence 245689999999999988899999999999999999999977643210 000 000 0
Q ss_pred ----c-ccccc-ccccCCC-----CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 ----L-QMLTD-SCLEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 ----~-~~~~~-~~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. ..... ....... ....+.++.+++.+||+.||.+|||++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 00000 0000000 1134678999999999999999999999997
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=331.83 Aligned_cols=241 Identities=19% Similarity=0.301 Sum_probs=204.1
Q ss_pred cccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHH
Q 012608 32 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 110 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~ 110 (460)
-.||+|.||+||.|+ ..+...+|||.+........+.+..|+.+.++|+|.|||+++|.+.+++.+-|.||-+|||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 358999999999999 5567889999998877777788999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc-CCCCeEEccCCCcccCCC----CCCccC
Q 012608 111 KHLFHWETHPM--KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRD----GKSYST 183 (460)
Q Consensus 111 ~~~~~~~~~~~--~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~DFg~a~~~~~----~~~~~~ 183 (460)
++++. .=+++ .+.+.--+.+||+.||.|||... |||||||.+|||++ -.|.+||+|||-+++... ..++.|
T Consensus 661 sLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~-IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG 738 (1226)
T KOG4279|consen 661 SLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENK-IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG 738 (1226)
T ss_pred HHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcc-eeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence 99975 22455 78888889999999999999998 99999999999997 568899999998876543 457899
Q ss_pred CCcccCccccccCC--CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012608 184 NLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261 (460)
Q Consensus 184 t~~y~aPE~~~~~~--~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (460)
|..|||||++..++ |+.++|||||||++.||.||++||..-........... -....+.+|..++.+...||.+|
T Consensus 739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG---myKvHP~iPeelsaeak~Filrc 815 (1226)
T KOG4279|consen 739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG---MYKVHPPIPEELSAEAKNFILRC 815 (1226)
T ss_pred chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc---ceecCCCCcHHHHHHHHHHHHHH
Confidence 99999999997665 88999999999999999999999854322111111111 11123456788999999999999
Q ss_pred cccCCCCCCChhHHHH
Q 012608 262 LQYEPRERPNPKSLVT 277 (460)
Q Consensus 262 l~~~p~~Rps~~~il~ 277 (460)
+.++|.+||++.+++.
T Consensus 816 Fepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 816 FEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred cCCCcccCccHHHhcc
Confidence 9999999999999997
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-42 Score=328.07 Aligned_cols=235 Identities=20% Similarity=0.231 Sum_probs=196.6
Q ss_pred hcccCCCCCCeEEEEEE----cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 31 VSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
++.||+|+||.||++.. .+|+.||+|+++..... ....+..|++++++++||||+++++++..++..|+||||+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 35789999999999874 35899999998754322 3456788999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
+|++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++...... ..
T Consensus 81 ~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~ 157 (318)
T cd05582 81 RGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 157 (318)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceec
Confidence 99999998863 457899999999999999999999999 999999999999999999999999998764433 24
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..||+.|+|||.+.+..++.++|||||||++|+|++|+.||............... ...++..+++.+.+++.+
T Consensus 158 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~ 231 (318)
T cd05582 158 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQSLLRA 231 (318)
T ss_pred ccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHH
Confidence 56899999999998888899999999999999999999998765433222221111 112445677899999999
Q ss_pred HcccCCCCCCChhH
Q 012608 261 CLQYEPRERPNPKS 274 (460)
Q Consensus 261 ~l~~~p~~Rps~~~ 274 (460)
||+.||.+||++.+
T Consensus 232 ~l~~~P~~R~~a~~ 245 (318)
T cd05582 232 LFKRNPANRLGAGP 245 (318)
T ss_pred HhhcCHhHcCCCCC
Confidence 99999999999655
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=318.32 Aligned_cols=241 Identities=19% Similarity=0.258 Sum_probs=196.0
Q ss_pred cCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 34 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 34 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
||+|+||+||++.. .+|+.||+|++...... ..+.+..|+.+++.++||||+++.+++..++..++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999984 56899999998654322 235678899999999999999999999999999999999999999
Q ss_pred Hhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CCccC
Q 012608 110 AKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYST 183 (460)
Q Consensus 110 ~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~~~~ 183 (460)
.+.+... ....+++..+..++.||+.||.|||+++ |+||||||+||+++.++.++|+|||++...... ....|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR-IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 8877431 3456899999999999999999999999 999999999999999999999999998765432 23468
Q ss_pred CCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 012608 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263 (460)
Q Consensus 184 t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (460)
|+.|+|||.+.+..++.++|||||||++|+|++|+.||................... ...++..++..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence 899999999998889999999999999999999999986542211111111111111 123445677899999999999
Q ss_pred cCCCCCC-----ChhHHHH
Q 012608 264 YEPRERP-----NPKSLVT 277 (460)
Q Consensus 264 ~~p~~Rp-----s~~~il~ 277 (460)
.||++|| +++++++
T Consensus 238 ~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCHHHhcCCCCCCHHHHhc
Confidence 9999999 6677776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=324.55 Aligned_cols=237 Identities=19% Similarity=0.245 Sum_probs=197.3
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||.||+|.. .+|+.||+|+++... ......+..|..++..+ +||||+++++++..++..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3589999999999995 458999999987542 22345677899999876 899999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....
T Consensus 81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHG-VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeecccceecccCCccccccc
Confidence 999988863 457899999999999999999999999 99999999999999999999999999875322 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||++.+..++.++|||||||++|+|++|+.||................ ..++..+++++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~ll~~~L 231 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD------VLYPVWLSKEAVSILKAFM 231 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHh
Confidence 8999999999988889999999999999999999999987655433332221111 1234456789999999999
Q ss_pred ccCCCCCC-------ChhHHHH
Q 012608 263 QYEPRERP-------NPKSLVT 277 (460)
Q Consensus 263 ~~~p~~Rp-------s~~~il~ 277 (460)
+.||++|| ++.++++
T Consensus 232 ~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 232 TKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred ccCHHHcCCCCCCCCCHHHHhc
Confidence 99999999 7777775
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=333.33 Aligned_cols=245 Identities=18% Similarity=0.192 Sum_probs=197.7
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.|++++.||+|+||+||+|. ..+++.||+|++..... .....+.+|+.++++++||||+++++.+..++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 57889999999999999999 45689999999865322 224578899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 177 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----- 177 (460)
|++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~-ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 9999999998863 456889999999999999999999999 99999999999999999999999998742210
Q ss_pred ----------------------------------------------CCCccCCCcccCccccccCCCCCCCceehHHHHH
Q 012608 178 ----------------------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLL 211 (460)
Q Consensus 178 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l 211 (460)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 0124588999999999988899999999999999
Q ss_pred HHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCC---hhHHHH
Q 012608 212 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 277 (460)
Q Consensus 212 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps---~~~il~ 277 (460)
|||++|..||.................. .........++++.+++.+|+ .+|.+|++ +.+++.
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINWQTS--LHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHccCCC--cCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 9999999999765332222111111000 111112345788999998887 59999987 777765
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=313.90 Aligned_cols=252 Identities=18% Similarity=0.177 Sum_probs=204.9
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
....+|++++.||+|+||.||+|.. .+|+.||+|++..........+.+|+.++++++||||+++++++..++..++||
T Consensus 6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 3456799999999999999999994 578999999997665555667889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||+++++|.+++.. .+++++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 162 (267)
T cd06646 86 EYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKG-KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK 162 (267)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence 99999999998863 457899999999999999999999999 999999999999999999999999998765422
Q ss_pred -CCccCCCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc-ccccccccccCCCCchhHHH
Q 012608 179 -KSYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-LQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 253 (460)
....++..|+|||.+. ...++.++|+|||||++|+|++|+.|+............ ......+. .......+..
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 240 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPK--LKDKTKWSST 240 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCC--CccccccCHH
Confidence 2345788999999874 344788999999999999999999887533211110000 00111111 1112345689
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHh
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L 279 (460)
+.+++.+||+.+|++|||++++++.|
T Consensus 241 ~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 241 FHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 99999999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=327.32 Aligned_cols=249 Identities=17% Similarity=0.173 Sum_probs=201.4
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
..-..|++++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++..++..+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 3446789999999999999999995 468999999986422 223456889999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++||+|.+++. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~~-IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 120 MVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSMG-LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 9999999999999885 346889999999999999999999999 999999999999999999999999998765432
Q ss_pred -----CCccCCCcccCccccccCC----CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 179 -----KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~----~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
....||+.|+|||++.+.. ++.++|||||||++|+|++|..||..................... .....
T Consensus 196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~--p~~~~ 273 (370)
T cd05621 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNF--PEDVE 273 (370)
T ss_pred CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCC--CCccc
Confidence 2456899999999986543 788999999999999999999999765443222222111111001 11124
Q ss_pred hHHHHHHHHHHHcccCCCC--CCChhHHHH
Q 012608 250 DGTELVRLASRCLQYEPRE--RPNPKSLVT 277 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~--Rps~~~il~ 277 (460)
.+..+.+++.+||+.++.+ |+|+.++++
T Consensus 274 ~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred CCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 5788999999999866544 889999988
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=321.09 Aligned_cols=245 Identities=27% Similarity=0.468 Sum_probs=196.2
Q ss_pred chhcccCCCCCCeEEEEEEc-----CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 29 NIVSEHGEKAPNVVYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
++.+.||.|+||.||+|.+. .+..|+||.++..... ..+.+.+|++.+++++||||++++|++...+..++|+|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 45678999999999999965 3678999999664332 26789999999999999999999999998888999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|+++|+|.+++.......+++..+..|+.||+.||.|||+++ ++|+||+++||++++++.+||+|||++......
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN-IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT-EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence 999999999998754678999999999999999999999999 999999999999999999999999998776322
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
........|+|||.+.+..++.++||||||+++||+++ |+.|+.......+....... .....+..++..+.
T Consensus 161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQG-----QRLPIPDNCPKDIY 235 (259)
T ss_dssp ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTT-----EETTSBTTSBHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccceeccchhHHHH
Confidence 22345678999999988889999999999999999999 66776554333222222111 11223445678999
Q ss_pred HHHHHHcccCCCCCCChhHHHHHh
Q 012608 256 RLASRCLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~~L 279 (460)
+++..||..+|.+|||+.++++.|
T Consensus 236 ~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 236 SLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHHhcC
Confidence 999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=324.86 Aligned_cols=237 Identities=19% Similarity=0.250 Sum_probs=198.2
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+|++++.||+|+||.||++.. .+++.||+|+++.... ...+.+..|..++..+ +||+|+.+++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 467889999999999999985 4588999999875432 2245677888888888 6899999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 177 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~---- 177 (460)
||++|++|.+.+.. .+.+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 99999999988863 456899999999999999999999999 99999999999999999999999999875332
Q ss_pred CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 178 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 178 ~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...+.++.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~l 231 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAI 231 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCcCCHHHHHH
Confidence 23456899999999999888999999999999999999999998765443332222111 113455677899999
Q ss_pred HHHHcccCCCCCCCh
Q 012608 258 ASRCLQYEPRERPNP 272 (460)
Q Consensus 258 i~~~l~~~p~~Rps~ 272 (460)
+.+||+.+|.+|++.
T Consensus 232 i~~~l~~~p~~R~~~ 246 (323)
T cd05616 232 CKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHcccCHHhcCCC
Confidence 999999999999975
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=322.07 Aligned_cols=253 Identities=17% Similarity=0.251 Sum_probs=204.8
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCc----EEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.+|++++.||+|+||.||+|.+ .+|. .||+|.++.... ...+.+.+|+.+++.++||||+++++++..+ ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 5688999999999999999984 3444 489999875432 2356789999999999999999999998764 5789
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~ 179 (460)
++||+++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 86 v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~-iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 86 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcC-eeccccchhheEecCCCcEEEccccccccccCCC
Confidence 99999999999998642 346888999999999999999999999 9999999999999999999999999998654332
Q ss_pred ------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 180 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 180 ------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
...++..|++||.+.+..++.++|||||||++|||++ |..||.+.....+....... .....+..++.
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 238 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-----ERLPQPPICTI 238 (316)
T ss_pred cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC-----CCCCCCCCCCH
Confidence 1223568999999998889999999999999999998 88887654333222111111 01112344667
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
++..++.+||..+|.+|||+.+++..|..+....
T Consensus 239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 239 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 8999999999999999999999999988886554
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=313.88 Aligned_cols=253 Identities=17% Similarity=0.233 Sum_probs=207.8
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
++|++.+.||.|+||.||+|+ ..+++.||||.++.....+ ...+.+|+.+++.++||||+++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 467889999999999999999 4579999999876533222 346889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 102 EYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||+++++|.+++... ....+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999999887532 2345889999999999999999999999 999999999999999999999999988765432
Q ss_pred ---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh--hhhhccccccccccccCCCCchhHHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||...... .+.... .........+...+..
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 236 (267)
T cd08228 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI----EQCDYPPLPTEHYSEK 236 (267)
T ss_pred HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH----hcCCCCCCChhhcCHH
Confidence 2346788999999998888899999999999999999999988544221 111111 1111111223346678
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
+.+++.+||..+|.+||++.++++.|+.+.
T Consensus 237 ~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 237 LRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 999999999999999999999999988763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=318.45 Aligned_cols=255 Identities=22% Similarity=0.288 Sum_probs=209.1
Q ss_pred CcccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
+.++.+.+.||.|+||.||++... ++..+++|.++.......+.+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 356788899999999999999732 35668999987655444567999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCe
Q 012608 99 LVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 164 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~ 164 (460)
+||||++|++|.+++.... .+.+++..++.++.||+.||+|||+++ ++||||||+||+++.++.+
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH-FVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcE
Confidence 9999999999999986432 234789999999999999999999999 9999999999999999999
Q ss_pred EEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccc
Q 012608 165 RLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQML 237 (460)
Q Consensus 165 kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 237 (460)
+|+|||++...... ....++..|+|||.+.+..++.++|||||||++|+|+| |..||...............
T Consensus 163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~- 241 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG- 241 (291)
T ss_pred EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC-
Confidence 99999998754332 22345678999999988889999999999999999999 88887554332222111111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 238 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.....+...+..+.+++.+||+.+|++|||+.++++.|+.+.+.
T Consensus 242 ----~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 242 ----RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ----CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11122345678899999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=323.04 Aligned_cols=237 Identities=19% Similarity=0.242 Sum_probs=196.4
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||.||++.. .+|+.||+|+++... ......+..|..++..+ +||||+++++++...+..++||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 3689999999999995 468999999987542 22345677788888765 899999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC----CCCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~----~~~~~~ 182 (460)
++|.+++.. ...+++..+..++.|++.||+|||+++ |+||||||+|||++.++.++|+|||++.... ......
T Consensus 81 g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKG-IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence 999998863 457899999999999999999999999 9999999999999999999999999986432 123456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..++.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------TPHYPRWITKESKDILEKLF 231 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHc
Confidence 899999999999888999999999999999999999998765443332222111 12334456789999999999
Q ss_pred ccCCCCCCChh-HHHH
Q 012608 263 QYEPRERPNPK-SLVT 277 (460)
Q Consensus 263 ~~~p~~Rps~~-~il~ 277 (460)
+.||.+||++. ++++
T Consensus 232 ~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 232 ERDPTRRLGVVGNIRG 247 (316)
T ss_pred cCCHHHcCCChHHHHc
Confidence 99999999984 5553
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=316.05 Aligned_cols=242 Identities=16% Similarity=0.218 Sum_probs=194.8
Q ss_pred cCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 34 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 34 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
||+|+||.||++.. .+|+.||+|++...... ....+..|++++++++||||+++++++..+...++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999984 56999999998643221 234566799999999999999999999999999999999999999
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC---CccCCCc
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---SYSTNLA 186 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---~~~~t~~ 186 (460)
.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++....... ...++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD-IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 98886545556889999999999999999999999 9999999999999999999999999987654332 3467899
Q ss_pred ccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCC
Q 012608 187 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 266 (460)
Q Consensus 187 y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 266 (460)
|+|||++.+..++.++|||||||++|+|++|+.||..................... ......++.++.+++.+||+.||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV-KFEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc-ccccccCCHHHHHHHHHHhccCH
Confidence 99999998888999999999999999999999988643211111000000010000 01123467889999999999999
Q ss_pred CCCCChhHHHH
Q 012608 267 RERPNPKSLVT 277 (460)
Q Consensus 267 ~~Rps~~~il~ 277 (460)
++||++.++++
T Consensus 239 ~~R~~~~~~~~ 249 (277)
T cd05607 239 EDRLGSREKND 249 (277)
T ss_pred hhCCCCccchh
Confidence 99999977654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=310.21 Aligned_cols=250 Identities=25% Similarity=0.355 Sum_probs=206.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEe-eCCeeEEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC-EGDERLLVAE 102 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e 102 (460)
+..++++.+.||+|+||.||++.. .|..|++|.++... ..+.+.+|+.++++++|+|++++++++. .++..+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 346788999999999999999986 47889999986533 3567999999999999999999999764 4567899999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-CCc
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 181 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~~ 181 (460)
|+++++|.+++.......+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||++...... ...
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 159 (256)
T cd05082 81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159 (256)
T ss_pred CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccccchheEEEcCCCcEEecCCccceeccccCCCC
Confidence 999999999987544456889999999999999999999999 999999999999999999999999998764433 233
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
.++..|+|||.+.+..++.++|||||||++|+|++ |+.|+............... .....+..+++.+.+++.+
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 234 (256)
T cd05082 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-----YKMDAPDGCPPVVYDVMKQ 234 (256)
T ss_pred ccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCCCCHHHHHHHHH
Confidence 44678999999988889999999999999999998 88887654333222211111 1123345677899999999
Q ss_pred HcccCCCCCCChhHHHHHhccc
Q 012608 261 CLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~ 282 (460)
||+.+|++|||+.++++.|+.+
T Consensus 235 ~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 235 CWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HhcCChhhCcCHHHHHHHHhcC
Confidence 9999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-41 Score=321.47 Aligned_cols=245 Identities=21% Similarity=0.224 Sum_probs=212.7
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.|++.+.||.|.||.||+++. .+|+.+|+|++...... +.+.+.+|+++|++++ |||||.++++++..+..++||
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm 115 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM 115 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence 488889999999999999995 45999999999765543 3468999999999997 999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC----CCCeEEccCCCcccCCC
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~----~~~~kl~DFg~a~~~~~ 177 (460)
|++.||.|.+.+... .+++..+..++.|++.++.|||+.| |+||||||+|+|+.. ++.+|++|||++.....
T Consensus 116 EL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g-vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG-VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred EecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC-ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 999999999999764 3999999999999999999999999 999999999999953 35799999999988776
Q ss_pred C---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 178 G---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 178 ~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
. ....||+.|+|||++....++..+||||+|+++|.|++|..||.+............. +........+.++..+
T Consensus 192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~--~~~f~~~~w~~is~~a 269 (382)
T KOG0032|consen 192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG--DFDFTSEPWDDISESA 269 (382)
T ss_pred CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC--CCCCCCCCccccCHHH
Confidence 3 4568999999999999899999999999999999999999999887654433322221 1123344566778999
Q ss_pred HHHHHHHcccCCCCCCChhHHHH
Q 012608 255 VRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+++..|+..||..|+|+.++++
T Consensus 270 kd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 270 KDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHHHHHhcccCcccCCCHHHHhc
Confidence 99999999999999999999999
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-41 Score=323.70 Aligned_cols=241 Identities=17% Similarity=0.257 Sum_probs=195.4
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||.||++.. .+++.||+|+++.... .....+.+|..++.++ +||||+++++++...+..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3579999999999994 4689999999975432 2245688999999999 799999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC----CCCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~----~~~~~~ 182 (460)
++|.+++.. .+.+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++... ......
T Consensus 81 g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEECcCccccccccCCCcccccc
Confidence 999988863 467999999999999999999999999 9999999999999999999999999986422 123457
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh-----hhhccccccccccccCCCCchhHHHHHHH
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
||+.|+|||++.+..++.++|+|||||++|+|++|+.||....... ............ ...++..++.++.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~l 235 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSV 235 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence 8999999999998889999999999999999999999985321110 000000000110 113455677899999
Q ss_pred HHHHcccCCCCCCC------hhHHHH
Q 012608 258 ASRCLQYEPRERPN------PKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps------~~~il~ 277 (460)
+.+||+.||.+|+| +.++++
T Consensus 236 i~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 236 LKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 99999999999998 456654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=326.70 Aligned_cols=247 Identities=20% Similarity=0.311 Sum_probs=195.1
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeC-----CeeE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 98 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 98 (460)
.|++.+.||+|+||.||+|.. .+|+.||||+++... ......+.+|+.++++++||||+++++++... ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 478889999999999999994 569999999987432 22345788999999999999999999988543 2479
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999996 78988886 3456899999999999999999999999 999999999999999999999999998754321
Q ss_pred -------CCccCCCcccCcccccc--CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh------------------
Q 012608 179 -------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD------------------ 231 (460)
Q Consensus 179 -------~~~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~------------------ 231 (460)
....+|..|+|||++.+ ..++.++|||||||++|+|+||+.||..........
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 23468899999999865 568899999999999999999999886542211000
Q ss_pred -cc----ccccc--cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 232 -RN----LQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 232 -~~----~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.. ..... .+.......+..++.+.+++.+||+.||.+|||++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00 00000 000000111245678899999999999999999999997
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=347.24 Aligned_cols=255 Identities=24% Similarity=0.361 Sum_probs=208.8
Q ss_pred cccchhcccCCCCCCeEEEEEEcC--Cc----EEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN--QR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
+...+.+.||+|+||.||.|...+ |. .||||.+++.... ....|.+|+.+|+.++|||||+++|++......+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 345567889999999999999543 43 4899998876533 4678999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 99 LVAEYMPNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
|++|||.||+|..++++.+ ...++....+.++.+|+.|+.||++++ .|||||..+|+|++....+||+|||+|+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~-fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH-FVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC-CcCcchhhhheeecccCcEEEcccchhH
Confidence 9999999999999998632 346889999999999999999999999 9999999999999999999999999999
Q ss_pred cCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhC-CCCCCChhhhhhhhccccccccccccCCC
Q 012608 174 NSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 174 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (460)
..-... .-.-+..|||||.+..+.+|.|+|||||||++||++|- ..|++......+.... .... .-..
T Consensus 851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~----~~gg-RL~~ 925 (1025)
T KOG1095|consen 851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDV----LEGG-RLDP 925 (1025)
T ss_pred hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHH----HhCC-ccCC
Confidence 433221 11224689999999999999999999999999999994 4555544322222111 1111 2244
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
|..+|..+.++|..||+.+|++||++..+++.+..+....
T Consensus 926 P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 926 PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred CCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 6678899999999999999999999999999887776543
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=339.50 Aligned_cols=247 Identities=18% Similarity=0.222 Sum_probs=205.1
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCC-------
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------- 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 95 (460)
..|.+.+.||+|+||+||++. ..+|+.||||++...... ....+.+|+.++..++|+||++++..+...+
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 578899999999999999998 557999999998765432 2456889999999999999999988775432
Q ss_pred -eeEEEEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCc
Q 012608 96 -ERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 172 (460)
Q Consensus 96 -~~~lv~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a 172 (460)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~-IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEeCCCCEEEEecccC
Confidence 367999999999999988642 2357899999999999999999999999 999999999999999999999999998
Q ss_pred ccCCC------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCC
Q 012608 173 KNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 173 ~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (460)
+.... .....||+.|+|||.+.+..++.++|||||||++|+|++|+.||................. ...
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~-----~~~ 265 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY-----DPL 265 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC-----CCC
Confidence 75432 2345689999999999988899999999999999999999999876544333222221111 124
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
+..+++++.+++.+||+.+|.+||++.+++..
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 55677899999999999999999999999863
|
|
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=312.51 Aligned_cols=256 Identities=18% Similarity=0.244 Sum_probs=209.0
Q ss_pred CcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
+.+|++.+.||.|+||.||++. ..+|+.++||.+......+ ...+.+|+.+++.++||||+++++++..++..+++
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 3568889999999999999999 5679999999886543222 45788999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 101 AEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
|||++|++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 9999999999988632 2356899999999999999999999999 999999999999999999999999988765432
Q ss_pred ----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 179 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
....++..|+|||.+.+..++.++|+||||+++|+|++|..||.......... .............+...++.+
T Consensus 160 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08229 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEEL 237 (267)
T ss_pred CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH--hhhhhcCCCCCCCcccccHHH
Confidence 23467889999999988889999999999999999999999886543221110 001111111112233567899
Q ss_pred HHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 255 VRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
.+++.+||..+|.+|||+.+|++.+..+.
T Consensus 238 ~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 238 RQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 99999999999999999999999887653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-41 Score=310.98 Aligned_cols=250 Identities=22% Similarity=0.288 Sum_probs=205.2
Q ss_pred cccchhcccCCCCCCeEEEEEEcC----CcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.+|++.+.||.|+||.||+|.+.. ...||+|.++...... ...+.+|+.++++++||||+++++++...+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 357788899999999999998532 4579999987544332 45789999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~- 179 (460)
|||+++++|.+++... .+.+++..++.++.|++.||.|||+.+ |+|+||||+||++++++.++|+|||++.......
T Consensus 84 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 84 TEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred EEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 9999999999998652 347899999999999999999999999 9999999999999999999999999988764211
Q ss_pred -----CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 180 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 180 -----~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
...++..|+|||.+.+..++.++||||||+++|+|++ |..||................. ...+..++..
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 236 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR-----LPPPMDCPSA 236 (266)
T ss_pred ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-----CCCCCCCCHH
Confidence 1234578999999988889999999999999999998 8888755433322222111111 1123456789
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 237 l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 237 LYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-41 Score=315.48 Aligned_cols=251 Identities=22% Similarity=0.272 Sum_probs=205.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
++.++.+.++||+|+||.||++.. .++..+++|.+..........+.+|++++++++||||+++++++...+..
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 82 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL 82 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence 456788899999999999999963 23668999998765544567899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCe
Q 012608 98 LLVAEYMPNETLAKHLFHWET-------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 164 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~ 164 (460)
+++|||+++++|.+++..... ..+++..++.++.|++.||+|||+.+ ++|+||||+|||+++++.+
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH-FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC-eecccccHhhEEEcCCCCE
Confidence 999999999999999864321 35788999999999999999999999 9999999999999999999
Q ss_pred EEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccc
Q 012608 165 RLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQML 237 (460)
Q Consensus 165 kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 237 (460)
+|+|||++...... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||...............
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~- 240 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG- 240 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC-
Confidence 99999998754322 22334678999999988889999999999999999998 78777543322211111111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 238 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
.....+..+++.+.+++.+||+.||.+||++.++++.|+
T Consensus 241 ----~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 241 ----RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ----ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111233456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-41 Score=309.15 Aligned_cols=241 Identities=21% Similarity=0.259 Sum_probs=198.3
Q ss_pred ccCCCCCCeEEEEEE---cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 33 EHGEKAPNVVYKGKL---ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
+||+|+||.||+|.+ .+++.+|+|+++..... ..+.+..|+.+++.++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999964 35789999998755432 2467899999999999999999999875 45678999999999
Q ss_pred CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-------C
Q 012608 108 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------S 180 (460)
Q Consensus 108 sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-------~ 180 (460)
+|.+++.. ...+++..+..++.|++.||.|||+++ ++||||||+||++++++.+||+|||++....... .
T Consensus 81 ~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETN-FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 99999863 456899999999999999999999999 9999999999999999999999999987654322 1
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..++..|+|||.+....++.++|+|||||++|||++ |..||.......+....... .....+..+++++.++|.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESG-----ERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCHHHHHHHH
Confidence 223578999999987888999999999999999998 88888654333222221111 112345567789999999
Q ss_pred HHcccCCCCCCChhHHHHHhccc
Q 012608 260 RCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+||+.||++||++.+|.+.|+..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhcc
Confidence 99999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=321.43 Aligned_cols=237 Identities=20% Similarity=0.265 Sum_probs=195.4
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||.||+|.. .+++.||||+++... ......+..|..++..+ +||||+++++++...+..++||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 3689999999999995 458899999987542 22345677788888765 999999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC----CCCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----DGKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~----~~~~~~ 182 (460)
++|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.... ......
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKG-IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence 999998863 456889999999999999999999999 9999999999999999999999999987532 123456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..++.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD------NPCYPRWLTREAKDILVKLF 231 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHHHHh
Confidence 899999999999888999999999999999999999998765433222211110 11234456788999999999
Q ss_pred ccCCCCCCChh-HHHH
Q 012608 263 QYEPRERPNPK-SLVT 277 (460)
Q Consensus 263 ~~~p~~Rps~~-~il~ 277 (460)
+.||++||++. ++++
T Consensus 232 ~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 232 VREPERRLGVKGDIRQ 247 (316)
T ss_pred ccCHhhcCCChHHHHc
Confidence 99999999997 5543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-41 Score=308.84 Aligned_cols=242 Identities=26% Similarity=0.387 Sum_probs=197.3
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
+.||+|+||.||+|+. .+|+.||+|.+...... ....+.+|++++++++||||+++++++...+..++||||++|++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999995 57999999987654322 246799999999999999999999999999999999999999999
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC------CccC
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYST 183 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~------~~~~ 183 (460)
.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd05084 81 LTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158 (252)
T ss_pred HHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence 999864 2346889999999999999999999999 9999999999999999999999999987543221 1122
Q ss_pred CCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 184 t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
+..|+|||.+.++.++.++||||||+++|+|++ |..|+............... .....+...+..+.+++.+||
T Consensus 159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l 233 (252)
T cd05084 159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG-----VRLPCPELCPDAVYRLMERCW 233 (252)
T ss_pred ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC-----CCCCCcccCCHHHHHHHHHHc
Confidence 456999999988889999999999999999998 77666443222211111111 111334456789999999999
Q ss_pred ccCCCCCCChhHHHHHhc
Q 012608 263 QYEPRERPNPKSLVTALS 280 (460)
Q Consensus 263 ~~~p~~Rps~~~il~~L~ 280 (460)
+.+|++|||+.++++.|+
T Consensus 234 ~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 234 EYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCChhhCcCHHHHHHHHh
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=316.75 Aligned_cols=253 Identities=23% Similarity=0.304 Sum_probs=206.7
Q ss_pred ccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
++.+.+.||.|+||.||++.. .++..+|+|.+..........+.+|++++++++||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 85 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 567888999999999999974 23456899998765444456799999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccC
Q 012608 101 AEYMPNETLAKHLFHWE-----------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 169 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~-----------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DF 169 (460)
|||+++++|.+++.... ...+++..++.++.|++.||+|||+++ ++||||||+||++++++.++|+||
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~-i~H~dlkp~Nili~~~~~~kl~df 164 (288)
T cd05093 86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDF 164 (288)
T ss_pred EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccCcceEEEccCCcEEeccC
Confidence 99999999999986422 235899999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccc
Q 012608 170 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 242 (460)
Q Consensus 170 g~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (460)
|++...... ....++..|+|||.+.+..++.++|||||||++++|++ |..||.................
T Consensus 165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~---- 240 (288)
T cd05093 165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV---- 240 (288)
T ss_pred CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc----
Confidence 998754322 12234678999999988889999999999999999999 8877755433222221111111
Q ss_pred cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 243 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
...+...+.++.+++.+||+.+|.+|||+.++++.|+.+...
T Consensus 241 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 241 -LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 112334667899999999999999999999999999888754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=322.35 Aligned_cols=237 Identities=19% Similarity=0.269 Sum_probs=197.9
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||.|+||.||++.. .+++.||||+++... ......+..|..++..+ +||||+++++++...+..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999995 458899999987542 22355678899999888 799999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|.+++.. .+.+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++..... .....
T Consensus 81 ~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHERG-IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee
Confidence 999988863 457999999999999999999999999 99999999999999999999999998864221 23346
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..++..+.+++.+||
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l 231 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED------EVRYPRWLSKEAKSILKSFL 231 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHc
Confidence 889999999999888999999999999999999999998765433322221111 11234556789999999999
Q ss_pred ccCCCCCCCh-----hHHHH
Q 012608 263 QYEPRERPNP-----KSLVT 277 (460)
Q Consensus 263 ~~~p~~Rps~-----~~il~ 277 (460)
..||.+|||+ .++++
T Consensus 232 ~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 232 TKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred cCCHHHcCCCCCCCHHHHhc
Confidence 9999999999 77776
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=323.60 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=202.0
Q ss_pred ccchhcccCCCCCCeEEEEEE-c-----CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcC-CCCccceeeeEEee-CCee
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-E-----NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQL-RNNRLTNLLGCCCE-GDER 97 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~-----~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~~iv~~~~~~~~-~~~~ 97 (460)
+|++++.||.|+||.||+|.. . +++.||+|+++...... .+.+.+|+.++.++ +||||+++++++.. +...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 689999999999999999963 2 35789999987543222 35678899999999 89999999998764 4568
Q ss_pred EEEEEcCCCCCHHhhhhccC-----------------------------------------------------------C
Q 012608 98 LLVAEYMPNETLAKHLFHWE-----------------------------------------------------------T 118 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~-----------------------------------------------------------~ 118 (460)
+++|||++|++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999885321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------CCccCCCcccCccc
Q 012608 119 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEY 192 (460)
Q Consensus 119 ~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~ 192 (460)
.++++..+..++.||+.||+|||+++ |+||||||+|||+++++.++|+|||++...... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~~-ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 26789999999999999999999999 999999999999999999999999998765322 22345678999999
Q ss_pred cccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCC
Q 012608 193 LRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 271 (460)
Q Consensus 193 ~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 271 (460)
+.+..++.++|||||||++|+|++ |..||............... ......+...++++.+++.+||+.+|++||+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE----GTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc----cCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 998899999999999999999998 88887653221111000000 0111223456688999999999999999999
Q ss_pred hhHHHHHhccccc
Q 012608 272 PKSLVTALSPLQK 284 (460)
Q Consensus 272 ~~~il~~L~~~~~ 284 (460)
+.++++.|+.+..
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987653
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-41 Score=308.96 Aligned_cols=247 Identities=26% Similarity=0.353 Sum_probs=203.7
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..++++.+.||+|+||.||++...++..+|+|++..... ....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 356788999999999999999977778899999865432 3467889999999999999999999999889999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----- 179 (460)
+|++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 82 ANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNG-FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred CCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 999999998642 346899999999999999999999999 9999999999999999999999999987554322
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...++..|+|||.+.+..++.++||||||+++|++++ |..||............... .....+...+..+.+++
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li 234 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-----YRLYRPKLAPTEVYTIM 234 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHH
Confidence 1123457999999988889999999999999999999 67777543322222111111 11123445678999999
Q ss_pred HHHcccCCCCCCChhHHHHHh
Q 012608 259 SRCLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L 279 (460)
.+||..+|++|||+.++++.|
T Consensus 235 ~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 235 YSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHhcCChhhCcCHHHHHHHh
Confidence 999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=323.47 Aligned_cols=233 Identities=21% Similarity=0.248 Sum_probs=191.9
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHH-HHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||+||++.. .+|+.||+|++..... .....+..|.. +++.++||||+++++.+...+..++||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 3589999999999995 4699999999865321 12344555554 56788999999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..... .....
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g-ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (323)
T cd05575 81 GELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC 157 (323)
T ss_pred CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccccc
Confidence 999998863 457899999999999999999999999 99999999999999999999999999875322 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ....++..+..+.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l 231 (323)
T cd05575 158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK------PLRLKPNISVSARHLLEGLL 231 (323)
T ss_pred CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHh
Confidence 899999999999888999999999999999999999998765443332222211 11234456789999999999
Q ss_pred ccCCCCCCChh
Q 012608 263 QYEPRERPNPK 273 (460)
Q Consensus 263 ~~~p~~Rps~~ 273 (460)
+.||.+||++.
T Consensus 232 ~~~p~~R~~~~ 242 (323)
T cd05575 232 QKDRTKRLGAK 242 (323)
T ss_pred hcCHHhCCCCC
Confidence 99999999985
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=316.81 Aligned_cols=248 Identities=20% Similarity=0.257 Sum_probs=208.2
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+-...|++++.||.|+||.||+|.. .+++.|++|.+........+.+.+|+.+++.++||||+++++.+..+...++||
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 4445788999999999999999984 568999999998766666778999999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++|++|.+++. ...+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~g-i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 97 EYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred cccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence 9999999999884 346889999999999999999999999 999999999999999999999999988754332
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||............ ..........+...+..+.++
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l 249 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---ATNGTPELQNPEKLSAIFRDF 249 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHH---hcCCCCCCCCccccCHHHHHH
Confidence 2346788999999998888899999999999999999999998654332111110 011111112344567889999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
+.+||..+|++|||+.++++
T Consensus 250 i~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 250 LNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHHHCcCCcccCcCHHHHhh
Confidence 99999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=308.26 Aligned_cols=245 Identities=19% Similarity=0.272 Sum_probs=205.8
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|.+.+.||+|++|.||++.. .+|+.|++|.+...... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 366778899999999999995 46899999998654322 356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
++|++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK-ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 99999999997654567899999999999999999999999 9999999999999999999999999887654332
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...+++.|+|||.+.+..++.++|+||||+++++|++|+.||................ ....+..++..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~ 234 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-----FPPVSQMYSQQLAQLID 234 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----CCCCccccCHHHHHHHH
Confidence 3457889999999998889999999999999999999999986554322222211111 11233356688999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.+|++||++.++++
T Consensus 235 ~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 235 QCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred HHccCCcccCcCHHHHhh
Confidence 999999999999999987
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-41 Score=315.11 Aligned_cols=258 Identities=17% Similarity=0.211 Sum_probs=210.9
Q ss_pred HHHHHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee
Q 012608 15 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93 (460)
Q Consensus 15 ~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 93 (460)
|+++.+.....+.|+++++||.|+||.||+|.. .+++.|++|.+........+.+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (292)
T cd06644 1 YEHVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW 80 (292)
T ss_pred CchhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe
Confidence 356777777888999999999999999999995 4589999999876654456778999999999999999999999999
Q ss_pred CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 94 ~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
++..++||||++|++|..++.. ....+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 81 DGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMK-IIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred CCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCC-eeecCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999999999887754 2356899999999999999999999999 9999999999999999999999999876
Q ss_pred cCCCC----CCccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccC
Q 012608 174 NSRDG----KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 174 ~~~~~----~~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (460)
..... ....++..|+|||.+. ...++.++|+|||||++|+|++|..||............... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~ 235 (292)
T cd06644 159 KNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTL 235 (292)
T ss_pred eccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC---CCccC
Confidence 54322 2345788999999985 334678999999999999999999887553322111111111 01111
Q ss_pred CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+..++.++.+++.+||..+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 236 SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 223456678999999999999999999999987
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=325.74 Aligned_cols=255 Identities=20% Similarity=0.326 Sum_probs=218.7
Q ss_pred ccchhcccCCCCCCeEEEEEEcC-CcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
+..+-.+||.|.||.||.|.|.. .-.||||.++.+. ...++|+.|+.+|+.++|||+|+++|+|..+..+|||+|||.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence 34556899999999999999654 6789999998765 357899999999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC--CccC
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--SYST 183 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~--~~~~ 183 (460)
+|+|.++++......++.-..+.++.||..|++||..++ +|||||...|.|+.++..+|++|||+++.+.... .+.|
T Consensus 347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn-FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAG 425 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAG 425 (1157)
T ss_pred CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh-hhhhhhhhhhccccccceEEeeccchhhhhcCCceecccC
Confidence 999999999877778888889999999999999999999 9999999999999999999999999999876543 3333
Q ss_pred ---CCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 184 ---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 184 ---t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
++.|.|||.+....++.|+|||+|||+|||+.| |-.|+++-...... .+......-.-|..||+.+.+|++
T Consensus 426 AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY-----~LLEkgyRM~~PeGCPpkVYeLMr 500 (1157)
T KOG4278|consen 426 AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----GLLEKGYRMDGPEGCPPKVYELMR 500 (1157)
T ss_pred ccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH-----HHHhccccccCCCCCCHHHHHHHH
Confidence 578999999999999999999999999999998 55677664332222 122222333456788999999999
Q ss_pred HHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 260 RCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
.||+++|.+||++.++.+.++.++.....
T Consensus 501 aCW~WsPsDRPsFaeiHqafEtmf~~sSi 529 (1157)
T KOG4278|consen 501 ACWNWSPSDRPSFAEIHQAFETMFSSSSI 529 (1157)
T ss_pred HHhcCCcccCccHHHHHHHHHHHhccccc
Confidence 99999999999999999999998876544
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=326.48 Aligned_cols=255 Identities=17% Similarity=0.176 Sum_probs=203.4
Q ss_pred HHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEee
Q 012608 18 LKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93 (460)
Q Consensus 18 ~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 93 (460)
+.....+..+|++++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.+++.++||||+++++.+..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 334445567899999999999999999995 468999999986422 1224567899999999999999999999999
Q ss_pred CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 94 ~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
++..++||||++|++|.+++. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-EEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 999999999999999999885 346889999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCC-----CCccCCCcccCccccccCC----CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccC
Q 012608 174 NSRDG-----KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 174 ~~~~~-----~~~~~t~~y~aPE~~~~~~----~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (460)
..... ....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.....................
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-- 268 (371)
T cd05622 191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF-- 268 (371)
T ss_pred EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccC--
Confidence 65432 2456899999999986532 788999999999999999999999765443222222111111011
Q ss_pred CCCchhHHHHHHHHHHHcccCCCC--CCChhHHHHH
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRE--RPNPKSLVTA 278 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~--Rps~~~il~~ 278 (460)
.....++..+.++|.+||...+.+ |+++.++++.
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 269 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 112356789999999999844433 6788888874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=307.98 Aligned_cols=250 Identities=26% Similarity=0.376 Sum_probs=209.9
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..++++.+.||.|+||.||++.. .|+.||+|.++.... ..+++.+|+.++++++|+||+++++++..++..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 35678899999999999999986 478999999976543 4678999999999999999999999999889999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC-ccC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-YST 183 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~-~~~ 183 (460)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||.+........ ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 161 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKL 161 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccchhcccceEEEeCCCCEEEcccccccccccccccCCC
Confidence 9999999997544457899999999999999999999999 99999999999999999999999999887643322 234
Q ss_pred CCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 184 t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
+..|+|||.+....++.++||||||++++++++ |..||............... .....+...++.+.+++.+||
T Consensus 162 ~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l 236 (256)
T cd05039 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-----YRMEAPEGCPPEVYKVMKDCW 236 (256)
T ss_pred cccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-----CCCCCccCCCHHHHHHHHHHh
Confidence 567999999988889999999999999999997 88887655433322221111 112234456789999999999
Q ss_pred ccCCCCCCChhHHHHHhccc
Q 012608 263 QYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 263 ~~~p~~Rps~~~il~~L~~~ 282 (460)
..+|++|||+.++++.|+.+
T Consensus 237 ~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 237 ELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ccChhhCcCHHHHHHHHhcC
Confidence 99999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=308.05 Aligned_cols=250 Identities=24% Similarity=0.374 Sum_probs=209.2
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.+|.+.+.||.|+||.||++...+++.|+||.+.... .....+.+|+.++++++||||+++++++..+...++||||++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 4678889999999999999998778899999987543 345789999999999999999999999998889999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----CC
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 180 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~~ 180 (460)
+++|.+++....+..+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 163 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN-YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG 163 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence 999999997655567899999999999999999999999 999999999999999999999999998765432 12
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..++..|+|||.+.+..++.++|+||||++++++++ |+.||.+.............. ....+...+.++.+++.
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~ 238 (261)
T cd05034 164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-----RMPRPPNCPEELYDLML 238 (261)
T ss_pred cCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHHHHHH
Confidence 234568999999988889999999999999999999 888876543332222221111 11223345688999999
Q ss_pred HHcccCCCCCCChhHHHHHhccc
Q 012608 260 RCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+||+.+|++||++.++++.|+.+
T Consensus 239 ~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 239 QCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred HHcccCcccCCCHHHHHHHHhcC
Confidence 99999999999999999988753
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=317.06 Aligned_cols=257 Identities=22% Similarity=0.294 Sum_probs=205.7
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc-CCc--EEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (460)
.+.++++.+.||+|+||.||+|... +|. .+++|.++..... ....+.+|+.++.++ +||||+++++++..++..+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 5667889999999999999999853 454 4577777643322 245788999999999 8999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCe
Q 012608 99 LVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 164 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~ 164 (460)
+||||++|++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchheEEecCCCcE
Confidence 9999999999999986422 235789999999999999999999999 9999999999999999999
Q ss_pred EEccCCCcccCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccc
Q 012608 165 RLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDS 240 (460)
Q Consensus 165 kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 240 (460)
||+|||++...... ....++..|+|||.+.+..++.++|||||||++++|+| |..||..............
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----- 238 (303)
T cd05088 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----- 238 (303)
T ss_pred EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc-----
Confidence 99999998643211 11223567999999988888999999999999999998 8888765433322221111
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
......+...++.+.+++.+||+.+|++||++.+++..|..+....
T Consensus 239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111233456788999999999999999999999999988775543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=313.78 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=199.9
Q ss_pred chhcccCCCCCCeEEEEEE-----cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeEEE
Q 012608 29 NIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLV 100 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 100 (460)
++++.||.|+||+||++.. .+++.||+|.++..... ....+.+|++++++++||||+++++++... ...+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7889999999999988652 35789999998765432 356788999999999999999999987653 457899
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~- 179 (460)
|||+++++|.+++. ...+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 87 ~e~~~~~~l~~~~~---~~~l~~~~~~~i~~~l~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLP---KHKLNLAQLLLFAQQICEGMAYLHSQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHH---HcCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 99999999999985 346999999999999999999999999 9999999999999999999999999987654322
Q ss_pred ------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh---hhhcc-------cccccccccc
Q 012608 180 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRN-------LQMLTDSCLE 243 (460)
Q Consensus 180 ------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~---~~~~~-------~~~~~~~~~~ 243 (460)
...++..|+|||.+.+..++.++||||||+++++|+||..|+....... ..... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 2234567999999988889999999999999999999998864322110 00000 0000111111
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
...+...+..+.+++.+||+.+|++|||++++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 123455678999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=328.63 Aligned_cols=245 Identities=13% Similarity=0.130 Sum_probs=198.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||+|+||.||++.. .+|+.||+|+++... ......+..|+.++..++||||+++++.+..++..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 578889999999999999994 468999999986432 2235678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++|++|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~g-ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLG-FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 9999999999863 457899999999999999999999999 999999999999999999999999987643211
Q ss_pred -----------------------------------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCC
Q 012608 179 -----------------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 223 (460)
Q Consensus 179 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~ 223 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 134689999999999988899999999999999999999999876
Q ss_pred hhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCC---hhHHHH
Q 012608 224 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 277 (460)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps---~~~il~ 277 (460)
...................+. ....++++.+++.+|+. +|.+|++ +.++++
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 239 ETPQETYRKVMNWKETLVFPP--EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKS 292 (360)
T ss_pred CCHHHHHHHHHcCCCceecCC--CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence 544333222211100000110 11356789999999874 9999985 566665
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-41 Score=308.83 Aligned_cols=246 Identities=16% Similarity=0.205 Sum_probs=206.4
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC-CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
+|++.+.||.|+||.||++.. .+++.+|+|.++... ....+.+.+|+.+++.++||||+++++.+..++..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 467889999999999999994 468999999986433 234567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||.+...... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR-VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 9999999886545567899999999999999999999999 999999999999999999999999998765432 23
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..++..|+|||++.+..++.++|+||||+++|+|++|..||................ ....+..++..+.+++.+
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~ 234 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS-----YKPLPSHYSYELRSLIKQ 234 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC-----CCCCCcccCHHHHHHHHH
Confidence 567889999999988889999999999999999999999987654332222111111 112334566789999999
Q ss_pred HcccCCCCCCChhHHHHH
Q 012608 261 CLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~ 278 (460)
||+.||.+|||+.+++..
T Consensus 235 ~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 235 MFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHhCCcccCCCHHHHhhc
Confidence 999999999999999873
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=321.12 Aligned_cols=241 Identities=18% Similarity=0.250 Sum_probs=194.6
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||.||++.. .+++.||+|+++..... ....+..|+.++.++ +||||+++++++..++..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 3589999999999994 46899999999764322 245678899998877 899999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc
Confidence 999988763 457999999999999999999999999 99999999999999999999999999875321 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh-----hhccccccccccccCCCCchhHHHHHHH
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-----RDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
||+.|+|||++.+..++.++|||||||++|+|++|..||........ .......... ....++...+..+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~l 235 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASV 235 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHH
Confidence 89999999999988899999999999999999999999852111000 0000000000 1123456677899999
Q ss_pred HHHHcccCCCCCCCh------hHHHH
Q 012608 258 ASRCLQYEPRERPNP------KSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~------~~il~ 277 (460)
+.+||+.||++||++ .++++
T Consensus 236 l~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 236 LKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 999999999999985 56654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=325.79 Aligned_cols=246 Identities=17% Similarity=0.171 Sum_probs=201.3
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||+|+||.||++.. .+|+.||+|+++.... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 578889999999999999994 5699999999875432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC---
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~--- 179 (460)
|++|++|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~-i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG-YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999999998642 357999999999999999999999999 9999999999999999999999999987654332
Q ss_pred --CccCCCcccCccccc------cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 180 --SYSTNLAFTPPEYLR------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 180 --~~~~t~~y~aPE~~~------~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
...||+.|+|||++. ...++.++|||||||++|+|++|..||................. ..........+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 237 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR--FLKFPEDPKVS 237 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC--ccCCCCCCCCC
Confidence 236789999999986 34578899999999999999999999866543322221111100 00001122467
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+.+++.+||+ +|.+|||+.++++
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 889999999998 9999999999986
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=315.12 Aligned_cols=255 Identities=21% Similarity=0.275 Sum_probs=205.9
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCc--EEEEEEecCCCC-CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 99 (460)
+++|++.+.||.|+||.||+|... ++. .+++|.++.... ...+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 357888999999999999999854 343 578888874332 2346789999999999 79999999999998899999
Q ss_pred EEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeE
Q 012608 100 VAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 165 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~k 165 (460)
+|||+++++|.+++.... ...+++..++.++.|++.||+|||+++ ++||||||+|||+++++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ-FIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCcCCcceEEECCCCeEE
Confidence 999999999999986421 135788999999999999999999999 99999999999999999999
Q ss_pred EccCCCcccCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccccc
Q 012608 166 LSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSC 241 (460)
Q Consensus 166 l~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 241 (460)
|+|||++...... .....+..|+|||.+.+..++.++|||||||++|+|++ |..||...............
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~----- 234 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG----- 234 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----
Confidence 9999998643221 11223557999999988889999999999999999997 88888665443332222111
Q ss_pred ccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 242 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.....+..++..+.+|+.+||+.+|.+|||+.++++.|..+...
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11123445778999999999999999999999999998877654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=307.75 Aligned_cols=248 Identities=22% Similarity=0.322 Sum_probs=204.2
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.++++.+.||.|++|.||++....+..+|+|.+.... ...+.+.+|+.++++++|||++++++++. .+..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 3578889999999999999997777789999876543 23567899999999999999999999875 456889999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----C
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 180 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-----~ 180 (460)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN-YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccCcceEEEcCCCeEEECCCccceEccCCcccccCC
Confidence 999999997544556889999999999999999999999 9999999999999999999999999987553321 2
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..++..|+|||...+..++.++||||||+++|+|+| |..||................ ....+...+..+.+++.
T Consensus 163 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 237 (260)
T cd05069 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY-----RMPCPQGCPESLHELMK 237 (260)
T ss_pred CccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----CCCCCcccCHHHHHHHH
Confidence 335678999999988889999999999999999999 887876543332222111111 11234456789999999
Q ss_pred HHcccCCCCCCChhHHHHHhcc
Q 012608 260 RCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~ 281 (460)
+||..+|.+||+++++++.|+.
T Consensus 238 ~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 238 LCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHccCCcccCcCHHHHHHHHhc
Confidence 9999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=316.62 Aligned_cols=252 Identities=20% Similarity=0.309 Sum_probs=204.5
Q ss_pred cccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
.++.+.+.||+|+||.||++.. .++..||+|.++..... ..+.+.+|+.+++++ +||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 4577889999999999999973 13557999998755332 245789999999999 799999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
+++|||+++++|.+++.......+++..+..++.|++.||.|||+++ ++|+||||+|||++.++.++|+|||++.....
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 193 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGKIVKICDFGLARDIMN 193 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eehhhhccceEEEcCCCeEEECCCcccccccC
Confidence 99999999999999987544445899999999999999999999999 99999999999999999999999999875543
Q ss_pred CC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 178 GK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 178 ~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
.. ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.............. .......+...
T Consensus 194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~ 269 (302)
T cd05055 194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK----EGYRMAQPEHA 269 (302)
T ss_pred CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH----cCCcCCCCCCC
Confidence 22 2345678999999988889999999999999999998 8888765432211111110 01111223445
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
++.+.+++.+||..+|++|||+.++++.|+.+
T Consensus 270 ~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 270 PAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 68999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=323.21 Aligned_cols=236 Identities=18% Similarity=0.210 Sum_probs=193.2
Q ss_pred cccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC---CCHHHHHHHHH-HHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||.|+||+||++. ..+|+.||+|++..... .....+..|.. +++.++||||+++++++..++..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 358999999999999 45699999999865321 22345556655 46778999999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|...+. ....+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||++..... .....
T Consensus 81 ~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~g-ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (325)
T cd05604 81 GELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSIN-IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC 157 (325)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc
Confidence 99998886 3567899999999999999999999999 99999999999999999999999999875321 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||.+.+..++.++|||||||++|+|++|..||............... ....++..+..+.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ll~~ll 231 (325)
T cd05604 158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHK------PLVLRPGASLTAWSILEELL 231 (325)
T ss_pred CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcC------CccCCCCCCHHHHHHHHHHh
Confidence 899999999999888999999999999999999999998765443332222211 11233456788999999999
Q ss_pred ccCCCCCCChhHHH
Q 012608 263 QYEPRERPNPKSLV 276 (460)
Q Consensus 263 ~~~p~~Rps~~~il 276 (460)
+.+|.+||++.+.+
T Consensus 232 ~~~p~~R~~~~~~~ 245 (325)
T cd05604 232 EKDRQRRLGAKEDF 245 (325)
T ss_pred ccCHHhcCCCCCCH
Confidence 99999999886433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=312.92 Aligned_cols=255 Identities=20% Similarity=0.294 Sum_probs=201.8
Q ss_pred cccchhcccCCCCCCeEEEEEE-----cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee--CCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 98 (460)
..+++++.||+|+||.||++.. .+++.||+|+++.......+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 3678899999999999999974 2588999999876654446688999999999999999999998754 34688
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++|++|.+++.. ....+++..+..++.|++.||.|||+++ ++||||||+||++++++.++|+|||++......
T Consensus 84 lv~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 84 LVMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSKR-YVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred EEEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 99999999999999864 2346899999999999999999999999 999999999999999999999999998865433
Q ss_pred CC-------ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-----------ccccc
Q 012608 179 KS-------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLTDS 240 (460)
Q Consensus 179 ~~-------~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-----------~~~~~ 240 (460)
.. ..++..|+|||.+.+..++.++||||||++++||++|..++.............. .....
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKN 241 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhc
Confidence 21 1223469999999888899999999999999999998766533221111000000 00000
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
......+..++.++.+++.+||..+|++|||+.++++.|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 242 NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 111122345678999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=305.14 Aligned_cols=252 Identities=19% Similarity=0.208 Sum_probs=213.2
Q ss_pred HhcCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 21 ATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 21 ~~~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
..-++..+++++.||.|.-|+||++.+. ++..+|+|++.+.... ...+.+.|.+||+.++||.++.+|+.++.+..
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~ 151 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY 151 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence 3356778899999999999999999965 4799999999765433 24578889999999999999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.|++||||+||+|..+.+++.++.+++..++-++.+|+.||+|||..| ||.|||||+||||-++|.+.|+||.++....
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG-ivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG-IVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc-eeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 999999999999999999888899999999999999999999999999 9999999999999999999999999754210
Q ss_pred ------------------------------------C------------------------CCCccCCCcccCccccccC
Q 012608 177 ------------------------------------D------------------------GKSYSTNLAFTPPEYLRTG 196 (460)
Q Consensus 177 ------------------------------------~------------------------~~~~~~t~~y~aPE~~~~~ 196 (460)
. ..+++||..|.|||++.+.
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~ 310 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE 310 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence 0 0124578899999999999
Q ss_pred CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCC----h
Q 012608 197 RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----P 272 (460)
Q Consensus 197 ~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~ 272 (460)
..+.+.|.|+|||.+|||+.|..||.+............+... . .. .+..+..+.+||+++|.+||++|.. +
T Consensus 311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~--F-p~-~~~vs~~akDLIr~LLvKdP~kRlg~~rGA 386 (459)
T KOG0610|consen 311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK--F-PE-EPEVSSAAKDLIRKLLVKDPSKRLGSKRGA 386 (459)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc--C-CC-CCcchhHHHHHHHHHhccChhhhhccccch
Confidence 9999999999999999999999999887665554443332211 1 11 1256789999999999999999986 7
Q ss_pred hHHHH
Q 012608 273 KSLVT 277 (460)
Q Consensus 273 ~~il~ 277 (460)
.+|.+
T Consensus 387 ~eIK~ 391 (459)
T KOG0610|consen 387 AEIKR 391 (459)
T ss_pred HHhhc
Confidence 77765
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=311.85 Aligned_cols=249 Identities=21% Similarity=0.329 Sum_probs=200.3
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
++|++.+.||.|+||.||+|... ++..||+|+++.... .....+.+|+.+++.++||||+++++++..++..+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~ 85 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 85 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeE
Confidence 35788899999999999998742 356799999865332 22456889999999999999999999999889999
Q ss_pred EEEEcCCCCCHHhhhhccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCC
Q 012608 99 LVAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 170 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg 170 (460)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~vH~dlkp~Nil~~~~~~~~l~dfg 164 (277)
T cd05062 86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCcchheEEEcCCCCEEECCCC
Confidence 9999999999999886422 123577889999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccccccc
Q 012608 171 LMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 171 ~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
++....... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||............... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~ 239 (277)
T cd05062 165 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-----GL 239 (277)
T ss_pred CccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----Cc
Confidence 987543321 2234678999999988889999999999999999999 67777554332222111111 01
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
...+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 240 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1234456788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=294.50 Aligned_cols=254 Identities=20% Similarity=0.207 Sum_probs=209.2
Q ss_pred HHHhcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC----C----HHHHHHHHHHHhcC-CCCccceee
Q 012608 19 KNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP----D----PRQFLEEARSVGQL-RNNRLTNLL 88 (460)
Q Consensus 19 ~~~~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----~----~~~~~~E~~~l~~l-~h~~iv~~~ 88 (460)
..+.+.|..|.-...+|.|..++|-+.. ..+|+..|+|++...... . .+.-.+|+.||+++ .||+|+.+.
T Consensus 10 ~aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~ 89 (411)
T KOG0599|consen 10 DAAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQ 89 (411)
T ss_pred hhHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEee
Confidence 4556677777778888999999998887 557899999998543321 2 34567899999999 799999999
Q ss_pred eEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEcc
Q 012608 89 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 168 (460)
Q Consensus 89 ~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 168 (460)
++++.+...++|+|.|+.|.|.|++. ..-.+++....+|++|+..|++|||.++ ||||||||+|||++++.++||+|
T Consensus 90 D~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~-IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 90 DVYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARN-IVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred eeccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhh-hhhcccChhheeeccccceEEec
Confidence 99999999999999999999999996 4567999999999999999999999999 99999999999999999999999
Q ss_pred CCCcccCCCC---CCccCCCcccCcccccc------CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccc
Q 012608 169 FGLMKNSRDG---KSYSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239 (460)
Q Consensus 169 Fg~a~~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 239 (460)
||+++....+ ...+||++|.|||.+.. ..|+...|+|++|+++|.|+.|.+||+....-.+....... .
T Consensus 167 FGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG--k 244 (411)
T KOG0599|consen 167 FGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG--K 244 (411)
T ss_pred cceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc--c
Confidence 9999988766 46799999999998843 34788999999999999999999888654322221111111 1
Q ss_pred ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......-..+.+....++|.+||+.||.+|.|++++++
T Consensus 245 yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 245 YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 11122234567789999999999999999999999987
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-41 Score=321.28 Aligned_cols=236 Identities=20% Similarity=0.228 Sum_probs=192.4
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHH-HHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||+||++.. .+++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 3689999999999995 4588999999865321 12334444544 56788999999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|.+++.. .+.+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||++..... .....
T Consensus 81 ~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~g-iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 157 (325)
T cd05602 81 GELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC 157 (325)
T ss_pred CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccccc
Confidence 999998863 456888999999999999999999999 99999999999999999999999999875322 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ....++..+..+.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l 231 (325)
T cd05602 158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLEGLL 231 (325)
T ss_pred CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CcCCCCCCCHHHHHHHHHHc
Confidence 899999999999888999999999999999999999998765433322221111 11234567789999999999
Q ss_pred ccCCCCCCChhHHH
Q 012608 263 QYEPRERPNPKSLV 276 (460)
Q Consensus 263 ~~~p~~Rps~~~il 276 (460)
+.+|.+||++.+.+
T Consensus 232 ~~~p~~R~~~~~~~ 245 (325)
T cd05602 232 QKDRTKRLGAKDDF 245 (325)
T ss_pred ccCHHHCCCCCCCH
Confidence 99999999887543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=334.01 Aligned_cols=246 Identities=22% Similarity=0.269 Sum_probs=193.1
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeC--------Ce
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--------DE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~~ 96 (460)
..|++++.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++++++... ..
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 4588999999999999999995 568999999885432 3456799999999999999999886432 24
Q ss_pred eEEEEEcCCCCCHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-CeEEccCCCcc
Q 012608 97 RLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMK 173 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~DFg~a~ 173 (460)
+++||||++ ++|.+++.. .....+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||+++
T Consensus 142 l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~-IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCcCHHHEEEcCCCCceeeeccccch
Confidence 679999998 577776643 23467899999999999999999999999 99999999999998654 69999999998
Q ss_pred cCCCC---CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc--------------
Q 012608 174 NSRDG---KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------- 235 (460)
Q Consensus 174 ~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------------- 235 (460)
..... ....+|+.|+|||++.+. .++.++|||||||++|+|++|.+||.+............
T Consensus 220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~ 299 (440)
T PTZ00036 220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN 299 (440)
T ss_pred hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc
Confidence 65432 345679999999998764 589999999999999999999999876532211100000
Q ss_pred ---------ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 ---------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ---------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......+...++...++++.+||.+||+.||.+|||+.++++
T Consensus 300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 000011112234456789999999999999999999999987
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=310.74 Aligned_cols=252 Identities=17% Similarity=0.236 Sum_probs=201.4
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCc----EEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.++++++.||.|+||+||+|.. .+|+ .+++|.+...... ...++..|+.++++++||||+++++++. +...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 4578889999999999999984 4454 4788887543322 2457888888999999999999999875 456789
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
++||+++++|.+++.. ..+.+++..+..++.||+.||.|||+++ ++|+||||+|||+++++.+||+|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 86 VTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHR-MVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 9999999999999864 3457899999999999999999999999 999999999999999999999999998765322
Q ss_pred -----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....++..|++||.+.++.++.++|||||||++||+++ |..||.+............. .....+..++.
T Consensus 164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 238 (279)
T cd05111 164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKG-----ERLAQPQICTI 238 (279)
T ss_pred cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-----CcCCCCCCCCH
Confidence 22345678999999988889999999999999999998 88887654332221111100 01112233557
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
++..++.+||..+|.+|||+.++++.|..+...
T Consensus 239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 239 DVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 889999999999999999999999998887653
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=307.62 Aligned_cols=240 Identities=19% Similarity=0.334 Sum_probs=193.5
Q ss_pred cccCCCCCCeEEEEEEcC-------------CcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 32 SEHGEKAPNVVYKGKLEN-------------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
+.||+|+||.||+|+... ...|++|.+..........+..|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 358999999999998432 2358999887655444567889999999999999999999999888999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC-------eEEccCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-------PRLSTFGL 171 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~-------~kl~DFg~ 171 (460)
+||||+++++|..++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++. ++++|||+
T Consensus 81 lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKD-LVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred EEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCC-eECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 99999999999888754 3456899999999999999999999999 999999999999986654 89999999
Q ss_pred cccCCCCCCccCCCcccCccccc-cCCCCCCCceehHHHHHHHHh-hCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 172 MKNSRDGKSYSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLL-SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 172 a~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~sDi~slG~~l~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
+..........++..|+|||.+. +..++.++|||||||++|+|+ +|..|+........... ... . ......
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~-~~~----~--~~~~~~ 231 (262)
T cd05077 159 PITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF-YEG----Q--CMLVTP 231 (262)
T ss_pred CccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-Hhc----C--ccCCCC
Confidence 88766666667889999999886 456889999999999999998 57766654332211110 000 0 011223
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
.+.++.+|+.+||+.||.+||++.++++.|+
T Consensus 232 ~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 232 SCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 4578999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-43 Score=303.97 Aligned_cols=244 Identities=18% Similarity=0.252 Sum_probs=209.3
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.+.++++||+|+||.||++. ..+|..+|||.+.... +.+++..|+.++++++.|+||+++|.+.....+|+|||||-
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 36789999999999999998 5579999999986643 68899999999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCc
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSY 181 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~ 181 (460)
.|++.+.++. ++++++++++..+++.-++||+|||... -||||||..|||++.+|.+||+|||.+....+ ..+.
T Consensus 112 AGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~-KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTV 189 (502)
T KOG0574|consen 112 AGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLK-KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTV 189 (502)
T ss_pred CCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHH-HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcc
Confidence 9999998865 5789999999999999999999999987 89999999999999999999999999876554 3678
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (460)
.||+.|||||++..-.|..++||||||++..||..|++|+..--. + ...+.....+.+.-.-|...+.++-+|+++|
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP--M-RAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP--M-RAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc--c-ceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 899999999999888899999999999999999999977643210 0 1112222222222334566789999999999
Q ss_pred cccCCCCCCChhHHHH
Q 012608 262 LQYEPRERPNPKSLVT 277 (460)
Q Consensus 262 l~~~p~~Rps~~~il~ 277 (460)
|-.+|++|.|+.++++
T Consensus 267 LiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 267 LIKKPEERKTALRLCE 282 (502)
T ss_pred hcCCHHHHHHHHHHhh
Confidence 9999999999998887
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=320.07 Aligned_cols=236 Identities=17% Similarity=0.249 Sum_probs=196.3
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+++++.||+|+||.||++. ..+|+.||+|+++... ....+.+..|..++..+. |++|+++++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 5667889999999999998 4569999999987532 223456888999998885 6788899999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----C
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----G 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~ 178 (460)
|++|++|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..... .
T Consensus 82 y~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 82 YVNGGDLMYHIQQ--VGKFKEPQAVFYAAEISVGLFFLHRRG-IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred CCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEeccccccccCCCCccc
Confidence 9999999998863 457999999999999999999999999 99999999999999999999999999875332 2
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 232 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSIC 232 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHH
Confidence 3456899999999999888999999999999999999999998765433222221111 1134556778999999
Q ss_pred HHHcccCCCCCCCh
Q 012608 259 SRCLQYEPRERPNP 272 (460)
Q Consensus 259 ~~~l~~~p~~Rps~ 272 (460)
.+||+.+|.+|++.
T Consensus 233 ~~~l~~~p~~R~~~ 246 (323)
T cd05615 233 KGLMTKHPSKRLGC 246 (323)
T ss_pred HHHcccCHhhCCCC
Confidence 99999999999975
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=317.26 Aligned_cols=251 Identities=18% Similarity=0.294 Sum_probs=200.2
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
....|.++++||.|+||.||+|+. .+++.||+|.++..... ....+.+|+.++++++||||+++++++..++..++||
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 456799999999999999999995 46889999998754432 3456889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++ ++|.+.+.. .+..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 84 e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 84 EYLD-KDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred eCCC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence 9998 588887754 2345889999999999999999999999 999999999999999999999999998754322
Q ss_pred -CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc-----------------ccc
Q 012608 179 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------------LTD 239 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~-----------------~~~ 239 (460)
....+++.|+|||.+.+ ..++.++|||||||++|+|+||+.||............... ...
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 23456889999999865 45788999999999999999999998654332111100000 000
Q ss_pred cccc-------CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 SCLE-------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 ~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.... ....+.+++++.+++.+||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000 0112346778999999999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=311.68 Aligned_cols=239 Identities=23% Similarity=0.369 Sum_probs=191.6
Q ss_pred ccCCCCCCeEEEEEEcC-------------------------CcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCcccee
Q 012608 33 EHGEKAPNVVYKGKLEN-------------------------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNL 87 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 87 (460)
.||+|+||.||+|.... ...|++|++..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 23588998865543335678899999999999999999
Q ss_pred eeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-----
Q 012608 88 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----- 162 (460)
Q Consensus 88 ~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~----- 162 (460)
++++..++..++||||++|++|..++.. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKN-LVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCC-ccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999988864 3457889999999999999999999999 99999999999997543
Q ss_pred --CeEEccCCCcccCCCCCCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHh-hCCCCCCChhhhhhhhccccccc
Q 012608 163 --NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLL-SGKHIPPSHALDLIRDRNLQMLT 238 (460)
Q Consensus 163 --~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~-tg~~p~~~~~~~~~~~~~~~~~~ 238 (460)
.++++|||++..........++..|+|||.+.+ ..++.++|||||||++||++ +|..|+..............
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~--- 236 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEK--- 236 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHh---
Confidence 379999998866555455567889999998865 45789999999999999985 68877754432221111000
Q ss_pred cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 239 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 239 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
....+...++.+.+++.+||+.+|++|||+.++++.|.
T Consensus 237 ----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 237 ----KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ----ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11123334568999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-41 Score=313.89 Aligned_cols=247 Identities=18% Similarity=0.267 Sum_probs=201.5
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
|++.+.||.|+||.||++. ..+++.||+|.+....... ...+.+|+.++++++|++|+.+++.+..++..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 4566778999999999999 4569999999986543222 34577899999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 180 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~ 180 (460)
++|++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++...... ..
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 99999999886544556899999999999999999999999 999999999999999999999999998765433 23
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..|+..|+|||.+.+..++.++||||||+++|+|++|..||.......... ........ .....+...++++.+++.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE-EVERLVKE-VQEEYSEKFSPDARSLCKM 238 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH-HHHhhhhh-hhhhcCccCCHHHHHHHHH
Confidence 468899999999998889999999999999999999999986532111000 00000000 1112345567889999999
Q ss_pred HcccCCCCCCC-----hhHHHH
Q 012608 261 CLQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps-----~~~il~ 277 (460)
||+.||.+||| +.++++
T Consensus 239 ~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 239 LLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HhhcCHHHccCCCCCchHHHHc
Confidence 99999999999 788887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-41 Score=317.40 Aligned_cols=253 Identities=21% Similarity=0.294 Sum_probs=206.5
Q ss_pred cccchhcccCCCCCCeEEEEEEc--------CCcEEEEEEecCCCC-CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 95 (460)
.+|.+.+.||+|+||.||++... ++..||+|.++.... .....+.+|+.+++.+ +||||+++++++...+
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 67889999999999999999731 245799999875432 2356789999999999 8999999999999999
Q ss_pred eeEEEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~ 161 (460)
..++||||+++++|.+++.... ...+++..+..++.||+.||.|||+++ ++||||||+||+++.+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g-ivH~dlkp~Nili~~~ 173 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK-CIHRDLAARNVLVTEN 173 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC-eeecccccceEEEcCC
Confidence 9999999999999999986532 135778889999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccc
Q 012608 162 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 162 ~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 234 (460)
+.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|+|++ |..|+.......+.....
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~ 253 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 253 (304)
T ss_pred CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence 999999999987654321 2234578999999988889999999999999999998 677776544433322211
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
... ....+..++..+.+++.+||..+|.+|||+.++++.|+.+..
T Consensus 254 ~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 254 EGH-----RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred cCC-----cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 111 112344667899999999999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=312.74 Aligned_cols=247 Identities=18% Similarity=0.240 Sum_probs=201.2
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
|++.+.||.|+||+||++.. .+|+.||+|.+...... ....+.+|++++++++|+||+.+.+.+..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 45567789999999999994 56999999998654322 234578899999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 180 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~ 180 (460)
+++++|.+++.......+++..+..++.|++.||.|||+++ |+||||||+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN-TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 99999998886544557999999999999999999999999 999999999999999999999999988654332 23
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..|+..|+|||.+.+..++.++|+|||||++|+|++|..||................... ...++...+.++.+|+.+
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~ 238 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKM 238 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHH
Confidence 467899999999988889999999999999999999999986543222111111111111 112345567889999999
Q ss_pred HcccCCCCCCC-----hhHHHH
Q 012608 261 CLQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps-----~~~il~ 277 (460)
||+.||++||+ +.+++.
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 239 LLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HccCCHhHcCCCcccChHHHHc
Confidence 99999999999 556665
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=313.85 Aligned_cols=249 Identities=16% Similarity=0.186 Sum_probs=195.6
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcC---CCCccceeeeEEee-----CC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL---RNNRLTNLLGCCCE-----GD 95 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~-----~~ 95 (460)
.|++++.||+|+||+||++.. .+|+.||+|.++..... ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 377889999999999999994 46999999998754322 234566788877766 69999999998764 24
Q ss_pred eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
..+++|||++ ++|.+++.......+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccCccccc
Confidence 5789999998 58988886544556899999999999999999999999 999999999999999999999999998765
Q ss_pred CCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc--------c------cc
Q 012608 176 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------M------LT 238 (460)
Q Consensus 176 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------~------~~ 238 (460)
... ....+|..|+|||++.+..++.++|||||||++|+|++|.+||.............. . ..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 432 234678899999999888899999999999999999999988755422111100000 0 00
Q ss_pred -------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 -------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 -------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.........+.++..+.+++.+||+.||++|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000001122346678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=314.73 Aligned_cols=249 Identities=20% Similarity=0.259 Sum_probs=209.0
Q ss_pred hcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.+-...|.+++.||.|+||.||++.. .+|+.||+|.+........+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 44557789999999999999999994 57999999999776655667889999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|||++|++|.+++. ...+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 95 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~-i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 95 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred ecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 99999999999884 356889999999999999999999999 999999999999999999999999988765433
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....+++.|+|||.+.+..++.++|+|||||++|++++|..||.......... .......+....+...+..+.+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 247 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPERLSAVFRD 247 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee---eeccCCCCCCCCccccCHHHHH
Confidence 23467889999999988888999999999999999999999886542211100 0111111122234456788999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||+.+|.+||++.++++
T Consensus 248 li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 248 FLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHHccCChhhCcCHHHHhc
Confidence 999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=308.83 Aligned_cols=242 Identities=17% Similarity=0.254 Sum_probs=210.2
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
|.+-+.||+|.|.+|-+++ .-+|..||||++.....++ ..++.+|+++|+.++|||||++|.+......+|+|+|+=
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 5566788999999999998 5689999999997765544 567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc-CCCCeEEccCCCcccCCCC---CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG---KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~DFg~a~~~~~~---~~ 180 (460)
+||+|.|++.++. ..+.++.+.+++.||+.|+.|+|+.. +|||||||+||++. +-|.+||.|||++..+.++ .+
T Consensus 100 D~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH-VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T 177 (864)
T KOG4717|consen 100 DGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH-VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT 177 (864)
T ss_pred CCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh-hhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence 9999999998754 45999999999999999999999998 99999999999986 5688999999999877765 46
Q ss_pred ccCCCcccCccccccCCCC-CCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~-~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
.+|+..|.|||.+.+..|+ ++.|||||||+||-|.+|+.||............+... -..|..++.++.++|.
T Consensus 178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK------YtvPshvS~eCrdLI~ 251 (864)
T KOG4717|consen 178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK------YTVPSHVSKECRDLIQ 251 (864)
T ss_pred ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc------ccCchhhhHHHHHHHH
Confidence 7899999999999998886 48999999999999999999997654443333332221 2356778899999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
.||..||++|.|.++|..
T Consensus 252 sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 252 SMLVRDPKKRASLEEIVS 269 (864)
T ss_pred HHHhcCchhhccHHHHhc
Confidence 999999999999999976
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=312.48 Aligned_cols=252 Identities=23% Similarity=0.306 Sum_probs=205.2
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
.+|++++.||+|+||.||++... ....+|+|.+...... ....+.+|+.+++++ +||||+++++++..++..
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 35778899999999999999853 2368999998754322 245688999999999 899999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhcc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC
Q 012608 98 LLVAEYMPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 163 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~ 163 (460)
+++|||+++++|.+++... ....+++..++.++.|++.||.|||+++ |+||||||+||++++++.
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~Nil~~~~~~ 170 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK-CIHRDLAARNVLVTEDHV 170 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-ccccccceeeEEEcCCCe
Confidence 9999999999999998542 2356889999999999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccc
Q 012608 164 PRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 236 (460)
Q Consensus 164 ~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 236 (460)
+||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|+|++ |..|+...............
T Consensus 171 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 250 (293)
T cd05053 171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG 250 (293)
T ss_pred EEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999987654321 2234567999999988889999999999999999998 88787654333222211111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
.....+...+..+.+++.+||..+|++|||+.++++.|+.+.
T Consensus 251 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 251 -----YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -----CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111234456789999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=315.68 Aligned_cols=254 Identities=21% Similarity=0.295 Sum_probs=206.9
Q ss_pred cccchhcccCCCCCCeEEEEEEc--------CCcEEEEEEecCCCC-CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 95 (460)
.+|.+.+.||+|+||.||++... ++..+|+|.++.... .....+..|+.+++.+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56899999999999999999742 235699999876432 2345788999999999 8999999999999999
Q ss_pred eeEEEEEcCCCCCHHhhhhccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~ 161 (460)
..++||||+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~ 176 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 176 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC-cccccccHHheEEcCC
Confidence 99999999999999999975321 34788999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccc
Q 012608 162 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 162 ~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 234 (460)
+.++|+|||++....... ...++..|+|||.+.+..++.++|||||||++|+|++ |..||.............
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~ 256 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 256 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH
Confidence 999999999987654321 1223468999999988889999999999999999998 777776544332222111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.. .....+...+.++.+++.+||..+|.+|||+.++++.|+.+...
T Consensus 257 ~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 257 EG-----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred cC-----CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 11 11233456678999999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=322.40 Aligned_cols=248 Identities=16% Similarity=0.187 Sum_probs=195.7
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCC-----
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD----- 95 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 95 (460)
-..+|++++.||+|+||.||++.. .+|+.||+|++..... .....+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 346789999999999999999984 5699999999875432 23567889999999999999999999986543
Q ss_pred -eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 96 -ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 96 -~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
..++||||++ ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~-ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~ 172 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART 172 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEecCCCccc
Confidence 4799999997 46666653 35888999999999999999999999 99999999999999999999999999875
Q ss_pred CCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc-----------------
Q 012608 175 SRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL----------------- 234 (460)
Q Consensus 175 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~----------------- 234 (460)
.... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.............
T Consensus 173 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (359)
T cd07876 173 ACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPT 252 (359)
T ss_pred cccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 4332 34567899999999998889999999999999999999999986542111000000
Q ss_pred --------cccccccc-----------cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 --------QMLTDSCL-----------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 --------~~~~~~~~-----------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
........ ........++.+.+++.+||+.||++|||+.++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 253 VRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000 00111224578999999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=319.45 Aligned_cols=233 Identities=21% Similarity=0.245 Sum_probs=191.3
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHH-HHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||.|+||.||+++. .+|+.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999995 4689999999864321 12344555554 67889999999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|...+.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++..... .....
T Consensus 81 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05603 81 GELFFHLQR--ERCFLEPRARFYAAEVASAIGYLHSLN-IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC 157 (321)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc
Confidence 999888863 456889999999999999999999999 99999999999999999999999999875322 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
||+.|+|||.+.+..++.++|||||||++|+|++|..||............... ...++...+..+.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l 231 (321)
T cd05603 158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK------PLQLPGGKTVAACDLLVGLL 231 (321)
T ss_pred CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHc
Confidence 899999999998888999999999999999999999998765443333222211 12344566788999999999
Q ss_pred ccCCCCCCChh
Q 012608 263 QYEPRERPNPK 273 (460)
Q Consensus 263 ~~~p~~Rps~~ 273 (460)
+.+|.+||++.
T Consensus 232 ~~~p~~R~~~~ 242 (321)
T cd05603 232 HKDQRRRLGAK 242 (321)
T ss_pred cCCHhhcCCCC
Confidence 99999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=312.62 Aligned_cols=252 Identities=20% Similarity=0.274 Sum_probs=205.0
Q ss_pred ccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
++++.+.||+|+||.||+|... ....+++|.+...... ....+.+|+.+++.++||||+++++.+..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 3678899999999999999842 2357889988654422 24578899999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEE
Q 012608 100 VAEYMPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 157 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nil 157 (460)
++||+++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-ivH~dikp~nil 159 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK-LVHRDLAARNVL 159 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC-eehhhhhhheEE
Confidence 999999999999875321 135788999999999999999999999 999999999999
Q ss_pred EcCCCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhh
Q 012608 158 FDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIR 230 (460)
Q Consensus 158 l~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~ 230 (460)
+++++.++|+|||+++..... ....++..|+|||.+.+..++.++||||||+++++|+| |..||.+.....+.
T Consensus 160 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~ 239 (290)
T cd05045 160 VAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF 239 (290)
T ss_pred EcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 999999999999998754322 12234678999999988889999999999999999998 88888655433322
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 231 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
...... .....+..++.++.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 240 ~~~~~~-----~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 240 NLLKTG-----YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHhCC-----CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 221111 1112344567899999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=308.31 Aligned_cols=248 Identities=17% Similarity=0.186 Sum_probs=202.0
Q ss_pred CcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..+|++.+.||.|+||.||+|. ..+++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 3468889999999999999998 456999999998766544556788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
+++++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06645 88 CGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKG-KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRK 164 (267)
T ss_pred cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEECcceeeeEccCcccccc
Confidence 999999998863 457899999999999999999999999 999999999999999999999999988654322 3
Q ss_pred CccCCCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh-hhccccccccccccCCCCchhHHHHH
Q 012608 180 SYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-RDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
...|+..|+|||.+. ...++.++|+|||||++|+|++|..|+........ ..........+.. .....++..+.
T Consensus 165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 242 (267)
T cd06645 165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKL--KDKMKWSNSFH 242 (267)
T ss_pred cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcc--cccCCCCHHHH
Confidence 456889999999874 34578899999999999999999988754321111 1000011111111 11123567899
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.+|++|||+.++++
T Consensus 243 ~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 243 HFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHccCCchhCcCHHHHhc
Confidence 9999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=307.30 Aligned_cols=249 Identities=22% Similarity=0.315 Sum_probs=201.2
Q ss_pred cchhcccCCCCCCeEEEEEEc-C---CcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCe-----
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE-N---QRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE----- 96 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 96 (460)
+++.+.||+|+||.||+|... + +..||+|+++...... ...+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 467789999999999999853 2 4789999987644332 4578999999999999999999998865543
Q ss_pred -eEEEEEcCCCCCHHhhhhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 97 -RLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 97 -~~lv~e~~~g~sL~~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
.+++|||+++++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN-FIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchheEEECCCCeEEECCccc
Confidence 78999999999999888542 2246889999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccC
Q 012608 172 MKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 172 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (460)
++...... ...++..|+|||.+.+..++.++|||||||++|||++ |..||............... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~ 234 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-----NRL 234 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCC
Confidence 87654322 1234568999999988889999999999999999999 77777554332222211111 112
Q ss_pred CCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
..+..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 235 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 235 KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 23456778999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=318.48 Aligned_cols=249 Identities=19% Similarity=0.180 Sum_probs=198.0
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||+|+||.||++.. .+++.||+|++.... ....+.+.+|+.++..++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 688899999999999999994 468999999986422 2234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC---
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~--- 179 (460)
|++|++|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLG-YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred cCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 9999999999864 2456899999999999999999999999 9999999999999999999999999987544322
Q ss_pred --CccCCCcccCcccccc-----CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 180 --SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 180 --~~~~t~~y~aPE~~~~-----~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
...||+.|+|||++.. ..++.++|||||||++|+|++|+.||..................... ......++.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~ 238 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQF-PPDVTDVSE 238 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccC-CCccCCCCH
Confidence 2358999999999863 34788999999999999999999998765433222211111000001 111234678
Q ss_pred HHHHHHHHHcccCCCC--CCChhHHHHH
Q 012608 253 ELVRLASRCLQYEPRE--RPNPKSLVTA 278 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~--Rps~~~il~~ 278 (460)
.+..++.+||..++.+ |+++.++++.
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 8999999988654443 7899988873
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=304.65 Aligned_cols=243 Identities=30% Similarity=0.422 Sum_probs=204.3
Q ss_pred cccCCCCCCeEEEEEEc-C---CcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKLE-N---QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||.|+||.||++... . +..|++|.++...... .+.+.+|+.+++.++|+||+++++++..+...++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 36899999999999954 3 8899999998765443 67899999999999999999999999998999999999999
Q ss_pred CCHHhhhhccC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 107 ETLAKHLFHWE-------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 107 ~sL~~~~~~~~-------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
++|.+++.... ...+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK-FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC-cccCccCcceEEECCCCcEEEccccccccccccc
Confidence 99999987531 367899999999999999999999999 999999999999999999999999998876543
Q ss_pred -----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....++..|+|||.+....++.++||||||+++++|++ |..||.............. ......+..++.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 234 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-----GYRLPKPEYCPD 234 (262)
T ss_pred ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCCh
Confidence 23456789999999988889999999999999999999 5777765533322222211 112234456678
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
++.+++.+||..+|++|||+.++++.|+
T Consensus 235 ~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 235 ELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 9999999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=309.81 Aligned_cols=249 Identities=22% Similarity=0.354 Sum_probs=203.7
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
.++++++.||.|+||.||+|... .+..||+|.+..... .....+.+|+.+++.++||||+++++++...+..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 46788999999999999999853 247899999865432 22457889999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCC
Q 012608 99 LVAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 170 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg 170 (460)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK-FVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccChheEEEcCCCCEEECCcc
Confidence 9999999999999986422 234678899999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccccccc
Q 012608 171 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 171 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
+++..... ....++..|+|||.+.+..++.++|||||||++|+++| |..|+.............. ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~ 239 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID-----GGH 239 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc-----CCC
Confidence 98754332 23345778999999988889999999999999999998 8877765433322221111 111
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
...+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 240 LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1234456789999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=311.00 Aligned_cols=252 Identities=19% Similarity=0.325 Sum_probs=200.6
Q ss_pred cchhcccCCCCCCeEEEEEE-----cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 99 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~l 99 (460)
|++++.||+|+||.||++.. .++..||+|.++..... ....+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 67899999999999999973 35789999998755322 356799999999999999999999998765 56889
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~ 179 (460)
||||++|++|.+++.. ....+++..+..++.|++.||.|||+++ ++||||||+||+++.++.++|+|||++.......
T Consensus 86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~g-i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999998854 2346899999999999999999999999 9999999999999999999999999987654321
Q ss_pred -------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh-----------cccccccccc
Q 012608 180 -------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNLQMLTDSC 241 (460)
Q Consensus 180 -------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~-----------~~~~~~~~~~ 241 (460)
...++..|+|||.+.+..++.++||||||+++|+|+|++.|........... .........
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 242 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG- 242 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC-
Confidence 3345678999999988889999999999999999999876542211110000 000000000
Q ss_pred ccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 242 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
.....+..++..+.+|+.+||+.+|.+|||+.++++.|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11122345778999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=303.01 Aligned_cols=241 Identities=25% Similarity=0.404 Sum_probs=199.9
Q ss_pred ccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHHh
Q 012608 33 EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 111 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~ 111 (460)
.||.|+||.||+|...+++.+|+|.++...... ...+.+|++++++++||||+++++++...+..++||||++|++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 579999999999998788999999987654322 3468899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----CccCCCc
Q 012608 112 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLA 186 (460)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-----~~~~t~~ 186 (460)
++.. ....+++..+..++.|++.+|.|+|+.+ ++|+||||+||+++.++.++|+|||++....... ...++..
T Consensus 82 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRK-KKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 8864 2346889999999999999999999999 9999999999999999999999999986543221 2234567
Q ss_pred ccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccC
Q 012608 187 FTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265 (460)
Q Consensus 187 y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 265 (460)
|+|||.+.+..++.++||||||+++|++++ |..||............... .....+..++..+.+++.+||..+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-----YRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999988889999999999999999998 88888654333222211111 112334557789999999999999
Q ss_pred CCCCCChhHHHHHhc
Q 012608 266 PRERPNPKSLVTALS 280 (460)
Q Consensus 266 p~~Rps~~~il~~L~ 280 (460)
|++||++.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=304.63 Aligned_cols=242 Identities=20% Similarity=0.270 Sum_probs=196.6
Q ss_pred ccCCCCCCeEEEEEEc---CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCC
Q 012608 33 EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 108 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~s 108 (460)
+||+|+||.||+|.+. .+..||+|++....... .+.+.+|+.++++++||||+++++++. .+..++||||++|++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999753 35679999987654322 467999999999999999999999875 457899999999999
Q ss_pred HHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC-------c
Q 012608 109 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-------Y 181 (460)
Q Consensus 109 L~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~-------~ 181 (460)
|.+++.. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++........ .
T Consensus 81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKN-FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcC-eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9998864 2457899999999999999999999999 99999999999999999999999999875433211 1
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
.++..|+|||.+.+..++.++|||||||++|++++ |..||............... .....+..+++++.+++.+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG-----KRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-----CCCCCCCCCCHHHHHHHHH
Confidence 22468999999988889999999999999999996 88887654332222111111 1123445667899999999
Q ss_pred HcccCCCCCCChhHHHHHhccc
Q 012608 261 CLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~ 282 (460)
||..+|++||++.++.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999988765
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=310.11 Aligned_cols=240 Identities=23% Similarity=0.358 Sum_probs=194.0
Q ss_pred cccCCCCCCeEEEEEEc-CC-------cEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 32 SEHGEKAPNVVYKGKLE-NQ-------RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+.||.|+||.||+|... .+ ..|++|.+........+.+..|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 36899999999999843 22 34888887654444456788999999999999999999999998999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC--------eEEccCCCcccC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTFGLMKNS 175 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~--------~kl~DFg~a~~~ 175 (460)
+++++|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+||+++.++. ++++|||++...
T Consensus 81 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 81 VKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKG-LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 9999999998642 346889999999999999999999999 999999999999987654 699999998876
Q ss_pred CCCCCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCC-CChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 176 RDGKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIP-PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 176 ~~~~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
.......++..|+|||++.+. .++.++||||||+++|+|++|..++ .......... ... ....++...+.+
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~ 231 (258)
T cd05078 159 LPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYE------DRHQLPAPKWTE 231 (258)
T ss_pred CCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHH------ccccCCCCCcHH
Confidence 666667788999999999764 4789999999999999999996443 3221111110 000 012334455678
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
+.+++.+||+.+|++|||++++++.|+
T Consensus 232 ~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 232 LANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=309.17 Aligned_cols=253 Identities=19% Similarity=0.259 Sum_probs=203.3
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCc----EEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.++++++.||.|+||+||+|+ ..+|+ .||+|.++..... ....+.+|+.++..++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 457888999999999999998 44555 4899998754332 25678899999999999999999999865 45789
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~ 179 (460)
++||+++|+|.+++.. ..+.+++..+..++.|++.||.|||+++ ++||||||+|||+++++.+||+|||+++......
T Consensus 86 ~~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~ 163 (279)
T cd05109 86 VTQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVR-LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 163 (279)
T ss_pred EEEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence 9999999999999864 2356899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 180 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 180 ------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
...++..|+|||.+.+..++.++|||||||++|||++ |..||............... .....+...+.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 238 (279)
T cd05109 164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG-----ERLPQPPICTI 238 (279)
T ss_pred ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-----CcCCCCccCCH
Confidence 1234568999999988889999999999999999998 77777543322221111111 11122345678
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.+.+++.+||..||++||++.++++.|..+...+
T Consensus 239 ~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 239 DVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 8999999999999999999999999988776543
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=305.60 Aligned_cols=247 Identities=21% Similarity=0.246 Sum_probs=191.9
Q ss_pred cccCCCCCCeEEEEEEcC---CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 32 SEHGEKAPNVVYKGKLEN---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
+.||+|+||.||+|...+ +..+++|.++..... ....+.+|+.++++++||||+++++++......++||||++++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998533 467999988765432 2457889999999999999999999999888899999999999
Q ss_pred CHHhhhhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------
Q 012608 108 TLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 178 (460)
Q Consensus 108 sL~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------ 178 (460)
+|.+++.... ....++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN-FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-EeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 9999986422 234567788899999999999999999 999999999999999999999999998654322
Q ss_pred CCccCCCcccCccccccC-------CCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 179 KSYSTNLAFTPPEYLRTG-------RVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~-------~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
....++..|+|||.+.+. .++.++|+||||+++|+|++ |..||.............................
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 223457789999998532 35789999999999999996 9888865432222111111111111112223345
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
+..+.+++.+|| .+|.+|||+++|+..|+
T Consensus 240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 240 SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 678999999999 68999999999998774
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-41 Score=323.77 Aligned_cols=249 Identities=16% Similarity=0.224 Sum_probs=197.1
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeC-----
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG----- 94 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 94 (460)
.-+.+|++++.||+|+||.||++.. .+++.||||++...... ....+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3456789999999999999999984 46899999998754322 246788999999999999999999988643
Q ss_pred -CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 95 -DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 95 -~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
...++||||++ ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEECCCCCEEEeeCcccc
Confidence 34799999997 56766663 35888999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc--------------
Q 012608 174 NSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-------------- 236 (460)
Q Consensus 174 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~-------------- 236 (460)
..... ....+|..|+|||++.+..++.++|||||||++|+|++|+.||.+.............
T Consensus 168 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (355)
T cd07874 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_pred cCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence 65443 3456889999999999888999999999999999999999998654221110000000
Q ss_pred --------------c--c----cccc--cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 --------------L--T----DSCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 --------------~--~----~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. . +... ........+.++.+++.+||+.||++|||+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 0 0 0000 00112223567899999999999999999999998
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=304.46 Aligned_cols=249 Identities=20% Similarity=0.307 Sum_probs=205.3
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
..+++.+.||+|+||.||++...++..+++|.++... .....+.+|+.++++++|+||+++++++.. ...+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 4578899999999999999997778889999886542 235678999999999999999999999877 77899999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----C
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----S 180 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-----~ 180 (460)
+++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 162 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 162 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence 999999997655567889999999999999999999999 9999999999999999999999999887554321 1
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..++..|+|||.+.+..++.++|+|||||++++++| |..||................ ....+...+.++.+++.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~ 237 (260)
T cd05073 163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-----RMPRPENCPEELYNIMM 237 (260)
T ss_pred CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-----CCCCcccCCHHHHHHHH
Confidence 234567999999988889999999999999999999 887876543322221111111 11223456688999999
Q ss_pred HHcccCCCCCCChhHHHHHhccc
Q 012608 260 RCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+||+.+|++||++.++++.|+.+
T Consensus 238 ~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 238 RCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred HHcccCcccCcCHHHHHHHHhcC
Confidence 99999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=304.87 Aligned_cols=245 Identities=18% Similarity=0.216 Sum_probs=202.8
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-----CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.|++.+.||.|++|.||.+.. .+++.|++|.+...... ....+.+|+.++++++||||+++++++..++..++|
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 467788899999999999984 56899999998654322 134688999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
+||++|++|.+.+.. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 83 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 83 MEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 999999999998863 456889999999999999999999999 999999999999999999999999998754322
Q ss_pred -----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 179 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
....++..|+|||.+.+..++.++||||||+++|+|++|+.||............ .........+...+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI----ATQPTNPQLPSHVSPD 235 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH----hccCCCCCCCccCCHH
Confidence 2345678999999999888999999999999999999999887543221111111 1111122345567789
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
+.+++.+||..+|.+|||+.++++.
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 236 ARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHHHhhcCcccCCCHHHHhhC
Confidence 9999999999999999999999873
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=315.18 Aligned_cols=265 Identities=21% Similarity=0.297 Sum_probs=211.7
Q ss_pred CCccccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEEc-C-------CcEEEEEEecCCCCC-CHHHHHHHHHHHhc
Q 012608 8 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLE-N-------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQ 78 (460)
Q Consensus 8 ~~~~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~-~-------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~ 78 (460)
|.-++|.+.. ..|++++.||+|+||.||++... . +..||+|.++..... ....+.+|+.++++
T Consensus 2 ~~~~~~~~~~--------~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~ 73 (334)
T cd05100 2 PADPKWELSR--------TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKM 73 (334)
T ss_pred CCCcccccCH--------hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHh
Confidence 4445565555 45889999999999999999732 1 236899988754322 25678999999999
Q ss_pred C-CCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhC
Q 012608 79 L-RNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSK 143 (460)
Q Consensus 79 l-~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~ 143 (460)
+ +||||+++++++..++..+++|||+++++|.+++.... ...+++..+..++.|++.||.|||++
T Consensus 74 l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 153 (334)
T cd05100 74 IGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ 153 (334)
T ss_pred hcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 9 89999999999999999999999999999999986422 23477888999999999999999999
Q ss_pred CCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-
Q 012608 144 GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS- 216 (460)
Q Consensus 144 ~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t- 216 (460)
+ ++||||||+|||++.++.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|+|++
T Consensus 154 g-ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~ 232 (334)
T cd05100 154 K-CIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTL 232 (334)
T ss_pred C-eeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhc
Confidence 9 9999999999999999999999999987654321 1223467999999988889999999999999999998
Q ss_pred CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 217 GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 217 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
|..||............... .....+..++..+.+++.+||+.+|.+|||+.++++.|+.+....
T Consensus 233 g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 233 GGSPYPGIPVEELFKLLKEG-----HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred CCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 77777654433332221111 111234456788999999999999999999999999999887543
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=303.62 Aligned_cols=246 Identities=18% Similarity=0.215 Sum_probs=206.1
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++++.||.|+||.||.++ ..+++.+++|.+.... ......+.+|++++++++|+||+++++++...+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 37788999999999999998 5568999999986543 22356788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
++|++|.+++.......+++..+..++.|++.+|.|||+.+ ++|+||+|+||++++++.+||+|||++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG-ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 99999999997544567899999999999999999999999 999999999999999999999999998765433 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...++..|+|||.+.+...+.++|+||||+++++|++|..||................. ...+...+.++.+++.
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~ 234 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY-----TPVVSVYSSELISLVH 234 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----CCCccccCHHHHHHHH
Confidence 45678999999999887889999999999999999999988866433322222111111 1122456788999999
Q ss_pred HHcccCCCCCCChhHHHHH
Q 012608 260 RCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~ 278 (460)
+||..+|.+|||+.++++.
T Consensus 235 ~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 235 SLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHcccCcccCCCHHHHhhC
Confidence 9999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=305.94 Aligned_cols=253 Identities=20% Similarity=0.263 Sum_probs=207.4
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
..|++.+.||.|+||.||+|... +|+.||+|.++..... ..+.+.+|++++++++|+||+++++++..++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 35778889999999999999954 7999999988643322 2567899999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 102 EYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR-IMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 999999999988642 2356889999999999999999999999 999999999999999999999999988754432
Q ss_pred ---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh--hhhccccccccccccCCCCchhHHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--IRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
....++..|+|||.+.+..++.++|+||||+++|+|++|+.||....... ........ ..........+..
T Consensus 161 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 236 (267)
T cd08224 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC----DYPPLPADHYSEE 236 (267)
T ss_pred cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC----CCCCCChhhcCHH
Confidence 23457889999999988889999999999999999999999885432211 11111111 1111112256678
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
+.+++.+||..+|++|||+.++++.|+.+.
T Consensus 237 ~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 237 LRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=308.65 Aligned_cols=249 Identities=20% Similarity=0.294 Sum_probs=201.4
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
..+.+.+.||.|++|.||+|... .+..|++|.+....... ...+.+|+.++++++|+||+++++++...+..+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF 85 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence 34678888999999999999853 46789999886543222 456899999999999999999999998888999
Q ss_pred EEEEcCCCCCHHhhhhccCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC---CeEEccCC
Q 012608 99 LVAEYMPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFG 170 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~DFg 170 (460)
+||||++|++|.+++..... ..+++..+..++.||+.||+|||+++ ++|+||||+||+++.++ .+||+|||
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~nil~~~~~~~~~~kl~dfg 164 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH-FIHRDIAARNCLLTCKGPGRVAKIADFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccchheEEEeccCCCcceEeccCc
Confidence 99999999999998865321 25889999999999999999999999 99999999999998654 58999999
Q ss_pred CcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccccccc
Q 012608 171 LMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 171 ~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
+++...... ....+..|+|||.+.+..++.++|||||||++|+|++ |..||.............. ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~-----~~~ 239 (277)
T cd05036 165 MARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG-----GGR 239 (277)
T ss_pred cccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----CCc
Confidence 987653221 2223467999999988889999999999999999997 8888766443332221111 111
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
...+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 240 ~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 240 LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 2334566789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=311.11 Aligned_cols=254 Identities=18% Similarity=0.265 Sum_probs=201.5
Q ss_pred cccchhcccCCCCCCeEEEEEEcC-----------------CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCcccee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN-----------------QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNL 87 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~ 87 (460)
.+|+++++||+|+||.||++.... +..||+|.+...... ..+.+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 368899999999999999988432 246899998765432 35678899999999999999999
Q ss_pred eeEEeeCCeeEEEEEcCCCCCHHhhhhccC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE
Q 012608 88 LGCCCEGDERLLVAEYMPNETLAKHLFHWE---------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158 (460)
Q Consensus 88 ~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill 158 (460)
++++..++..+++||++++++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~-i~H~dlkp~Nili 163 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN-FVHRDLATRNCLV 163 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC-ccccccchhceee
Confidence 999999899999999999999999986432 126889999999999999999999999 9999999999999
Q ss_pred cCCCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh--CCCCCCChhhhhhh
Q 012608 159 DEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIR 230 (460)
Q Consensus 159 ~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t--g~~p~~~~~~~~~~ 230 (460)
+.++.++|+|||++...... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..|+.........
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~ 243 (296)
T cd05051 164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI 243 (296)
T ss_pred cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH
Confidence 99999999999998754322 22345678999999988889999999999999999998 55555432222111
Q ss_pred hcccccc--ccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 231 DRNLQML--TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 231 ~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
....... .........+..++.++.+++.+||+.+|.+|||+.++++.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 244 ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1111100 0011111223456689999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=312.49 Aligned_cols=248 Identities=19% Similarity=0.230 Sum_probs=200.8
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
+|++++.||.|+||.||++.. .+|..+|+|.++..... ....+.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 578899999999999999984 46889999998754322 2456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCCC--CCCc
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY 181 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~--~~~~ 181 (460)
+|++|.+++.. .+.+++..+..++.|++.||.|||++ + ++|+||||+||+++.++.++|+|||++..... ....
T Consensus 82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (308)
T cd06615 82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 158 (308)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCC-EEECCCChHHEEEecCCcEEEccCCCcccccccccccC
Confidence 99999999864 36789999999999999999999984 6 99999999999999999999999998875433 2345
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc---ccccc-------------------
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL---QMLTD------------------- 239 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~---~~~~~------------------- 239 (460)
.++..|+|||.+.+..++.++|+||||+++++|++|..||............. .....
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (308)
T cd06615 159 VGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMA 238 (308)
T ss_pred CCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhh
Confidence 67899999999988888999999999999999999998876432221111000 00000
Q ss_pred ---------ccccCCCC-chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 ---------SCLEGQFT-DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 ---------~~~~~~~~-~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.......+ ..++.++.+++.+||..+|++|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 286 (308)
T cd06615 239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK 286 (308)
T ss_pred HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000111 135678999999999999999999999988
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=306.76 Aligned_cols=247 Identities=19% Similarity=0.260 Sum_probs=190.3
Q ss_pred cccCCCCCCeEEEEEEcC---CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 32 SEHGEKAPNVVYKGKLEN---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
++||+|+||.||+|...+ ...+++|.+...... ....+.+|+.+++.++||||+++++.+...+..++||||++++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 468999999999997433 456888877644322 2456889999999999999999999999999999999999999
Q ss_pred CHHhhhhccCC---CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------
Q 012608 108 TLAKHLFHWET---HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 178 (460)
Q Consensus 108 sL~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------ 178 (460)
+|.+++..... ...++.....++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD-FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC-EecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 99999865322 23467788999999999999999999 999999999999999999999999998653221
Q ss_pred CCccCCCcccCcccccc-------CCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 179 KSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~-------~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
....++..|+|||++.. ..++.++|||||||++|+|++ |..||....................+....+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 22344677999998742 346789999999999999999 6666654332221111111111112222344567
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
+..+..++..|| .||++|||++++++.|.
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 788899999999 59999999999999764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=319.04 Aligned_cols=237 Identities=19% Similarity=0.250 Sum_probs=192.9
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|+||.||++.. .+++.||+|+++..... ..+.+.+|+.++.++ +||||+.+++++...+..++||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3689999999999994 56899999999764322 245688999999998 699999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERG-IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceeccc
Confidence 999988863 457999999999999999999999999 99999999999999999999999999875321 23456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh---hhccccccccccccCCCCchhHHHHHHHHH
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
||+.|+|||.+.+..++.++|||||||++|+|++|..||........ .......... ....++...+..+.+++.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~li~ 235 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILE--KPIRIPRFLSVKASHVLK 235 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHh--CCCCCCCCCCHHHHHHHH
Confidence 89999999999988899999999999999999999999853211000 0000000000 112345567789999999
Q ss_pred HHcccCCCCCCChh
Q 012608 260 RCLQYEPRERPNPK 273 (460)
Q Consensus 260 ~~l~~~p~~Rps~~ 273 (460)
+||..||++|+++.
T Consensus 236 ~~L~~dP~~R~~~~ 249 (327)
T cd05617 236 GFLNKDPKERLGCQ 249 (327)
T ss_pred HHhccCHHHcCCCC
Confidence 99999999999853
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=324.66 Aligned_cols=247 Identities=18% Similarity=0.233 Sum_probs=196.6
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCC-----eeE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERL 98 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 98 (460)
++++++.||+|+||.||++.. .+|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 367889999999999999994 5799999999865322 23467889999999999999999999998766 789
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||+. ++|.+.+. ....+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 81 lv~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 81 VVTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAG-ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 9999997 67887775 3567999999999999999999999999 999999999999999999999999998754322
Q ss_pred -----CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-----------------
Q 012608 179 -----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ----------------- 235 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~----------------- 235 (460)
....++..|+|||.+.+.. ++.++|||||||++|+|++|+.||..............
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHH
Confidence 2335688999999987644 78899999999999999999999865432111100000
Q ss_pred ------c-cccccc--cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 ------M-LTDSCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ------~-~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. ...+.. ........++++.+++.+||+.||.+|||+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0 000000 00123345688999999999999999999999987
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=308.64 Aligned_cols=245 Identities=16% Similarity=0.199 Sum_probs=200.8
Q ss_pred cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
|++++.||.|+||.||++... ++..+++|.+........+.+.+|+++++.++||||+++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 678899999999999999954 5888999998765544466789999999999999999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~~~ 182 (460)
++|..++.. ...++++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~-i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999887753 3457899999999999999999999999 999999999999999999999999998654322 3456
Q ss_pred CCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 183 TNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 183 ~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
++..|+|||.+. +..++.++|||||||++|+|++|+.||................. .....+..++.++.++
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l 241 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP---PTLAQPSRWSSEFKDF 241 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC---CCCCCccccCHHHHHH
Confidence 788999999974 34477899999999999999999988765432211111111100 0112234567889999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
+.+||..+|.+||++.++++
T Consensus 242 i~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 242 LKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 99999999999999999987
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=303.87 Aligned_cols=243 Identities=21% Similarity=0.296 Sum_probs=199.1
Q ss_pred cccCCCCCCeEEEEEEcC--Cc--EEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKLEN--QR--RIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||+|++|.||+|.+.+ ++ .||||.+..... ...+.+.+|+.++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 357999999999998533 33 689999987665 346689999999999999999999999887 889999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-------C
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------K 179 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-------~ 179 (460)
++|.+.+.......+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.+||+|||++...... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC-ccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 99999987543356899999999999999999999999 999999999999999999999999998765442 1
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...++..|+|||.+.+..++.++|||||||++++|++ |..||.............. .......+...+..+.+++
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li 234 (257)
T cd05040 159 HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK----EGERLERPEACPQDIYNVM 234 (257)
T ss_pred CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----cCCcCCCCccCCHHHHHHH
Confidence 2345678999999988889999999999999999999 9988754332222111111 0111122345678999999
Q ss_pred HHHcccCCCCCCChhHHHHHhc
Q 012608 259 SRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~ 280 (460)
.+||+.+|++|||+.++++.|.
T Consensus 235 ~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 235 LQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHCCCCcccCCCHHHHHHHhc
Confidence 9999999999999999999774
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=311.23 Aligned_cols=254 Identities=20% Similarity=0.276 Sum_probs=198.9
Q ss_pred cccchhcccCCCCCCeEEEEEEcC---------------CcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN---------------QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLG 89 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~ 89 (460)
.+|++.+.||+|+||.||++.... ...||+|.++...... ...+.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 378999999999999999987432 2358999987543222 457899999999999999999999
Q ss_pred EEeeCCeeEEEEEcCCCCCHHhhhhccC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc
Q 012608 90 CCCEGDERLLVAEYMPNETLAKHLFHWE----------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159 (460)
Q Consensus 90 ~~~~~~~~~lv~e~~~g~sL~~~~~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~ 159 (460)
++...+..++||||++|++|.+++.... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~-i~H~dlkp~Nill~ 163 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVG 163 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC-eeccccChhhEEEc
Confidence 9999999999999999999999885421 123678899999999999999999999 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh--CCCCCCChhhhhhhh
Q 012608 160 EDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRD 231 (460)
Q Consensus 160 ~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t--g~~p~~~~~~~~~~~ 231 (460)
+++.+||+|||++....... ...++..|+|||.+.++.++.++|||||||++++|++ |..||..........
T Consensus 164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 243 (295)
T cd05097 164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE 243 (295)
T ss_pred CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH
Confidence 99999999999987543221 2234678999999988889999999999999999998 445554432221111
Q ss_pred ccccccc--cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 232 RNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 232 ~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
....... ........++..++.+.+|+.+||+.+|++|||+.++++.|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 244 NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1100000 000111223456789999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=309.74 Aligned_cols=245 Identities=20% Similarity=0.278 Sum_probs=206.2
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..|++++.||.|++|.||+|. ..+|+.|++|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 458899999999999999998 4579999999997666556778899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
+|++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++...... ..
T Consensus 99 ~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~-i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (296)
T cd06655 99 AGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST 174 (296)
T ss_pred CCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCC
Confidence 9999999885 346899999999999999999999999 999999999999999999999999988754432 23
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..++..|+|||.+.+..++.++|||||||++|+|++|..||.............. ........+..+++.+.+++.+
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~ 251 (296)
T cd06655 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSPIFRDFLNR 251 (296)
T ss_pred cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cCCcccCCcccCCHHHHHHHHH
Confidence 4578899999999888899999999999999999999998865432211111000 0111112344567889999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
||..+|.+|||+.++++
T Consensus 252 ~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 252 CLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HhhcChhhCCCHHHHhh
Confidence 99999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=315.91 Aligned_cols=248 Identities=24% Similarity=0.343 Sum_probs=207.4
Q ss_pred chhcccCCCCCCeEEEEEEcC---Cc--EEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 29 NIVSEHGEKAPNVVYKGKLEN---QR--RIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~~~---~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.+.+.||.|-||.||.|...+ |+ .||||.-+.+.. .+.+.|..|+.+|+.++||||++++|+|.+ ...|||||
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmE 470 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVME 470 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEe
Confidence 345789999999999998432 33 478998887543 347889999999999999999999999965 57899999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCcc
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~ 182 (460)
.++-|.|+.++.. +...++......+..||+.+|+|||++. .|||||..+|||+.....+||+|||+++......-+.
T Consensus 471 L~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkr-fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk 548 (974)
T KOG4257|consen 471 LAPLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKR-FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK 548 (974)
T ss_pred cccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhc-hhhhhhhhhheeecCcceeeecccchhhhccccchhh
Confidence 9999999999975 4457888999999999999999999999 9999999999999999999999999999877654332
Q ss_pred -----CCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 183 -----TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 183 -----~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
-++.|||||.+....+|.+||||-||+.+||++. |..||.+-. +...........+...|+++|+.+..
T Consensus 549 aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk-----NsDVI~~iEnGeRlP~P~nCPp~LYs 623 (974)
T KOG4257|consen 549 ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK-----NSDVIGHIENGERLPCPPNCPPALYS 623 (974)
T ss_pred ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc-----ccceEEEecCCCCCCCCCCCChHHHH
Confidence 2578999999999999999999999999999876 777886532 22222222233334567899999999
Q ss_pred HHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 257 LASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
++.+||.++|.+||++.++...|+.+..
T Consensus 624 lmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 624 LMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 9999999999999999999988876644
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-40 Score=308.14 Aligned_cols=244 Identities=20% Similarity=0.262 Sum_probs=198.0
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
++++++.||+|+||.||++. ..+++.||+|.+...... ....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 56788999999999999998 457899999998654322 2457889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--CCcc
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYS 182 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--~~~~ 182 (460)
++++|..+ ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...... ....
T Consensus 82 ~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 154 (279)
T cd06619 82 DGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLK-ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV 154 (279)
T ss_pred CCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence 99999654 24788899999999999999999999 999999999999999999999999998765432 3457
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh---hhccccccccccccCCCCchhHHHHHHHHH
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
++..|+|||.+.+..++.++|+||||+++|+|++|+.||........ .....................++++.+++.
T Consensus 155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (279)
T cd06619 155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT 234 (279)
T ss_pred CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHH
Confidence 88999999999988899999999999999999999998854211100 000000001111111112345678999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.+|.+||+++++++
T Consensus 235 ~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 235 QCMRKQPKERPAPENLMD 252 (279)
T ss_pred HHhhCChhhCCCHHHHhc
Confidence 999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=306.85 Aligned_cols=251 Identities=22% Similarity=0.288 Sum_probs=203.6
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CC---cEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQ---RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
..++++.+.||.|+||.||+|... ++ ..||||.++..... ....|..|+.++++++||||+++++++..++..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 456888999999999999999854 34 36999998754322 25689999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~ 179 (460)
||||+++++|.+++.. ..+.+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 83 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g-~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 83 ITEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMN-YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EEecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999998864 2456899999999999999999999999 9999999999999999999999999886543221
Q ss_pred C-------cc--CCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 180 S-------YS--TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 180 ~-------~~--~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
. .. .+..|+|||.+.+..++.++|||||||++||+++ |..||................ ....+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~ 235 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY-----RLPPPMD 235 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC-----cCCCccc
Confidence 1 11 1347999999988889999999999999999886 888876543322222211111 1112345
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
++..+.+++.+||..+|.+||++.+++..|+.+
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 236 CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 678899999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=315.37 Aligned_cols=248 Identities=17% Similarity=0.197 Sum_probs=194.4
Q ss_pred chhcccCCC--CCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 29 NIVSEHGEK--APNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 29 ~i~~~lg~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
++++.||+| +|++||++. ..+|+.||+|++....... .+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred ChhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 357788999 778999998 4579999999987654322 45688899999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC------
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 177 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~------ 177 (460)
+++++|.+++.......+++..+..++.|++.||.|||+++ |+||||||+|||++.++.++++||+.......
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 99999999986544556899999999999999999999999 99999999999999999999999986433211
Q ss_pred -----CCCccCCCcccCcccccc--CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh----cccccccc-------
Q 012608 178 -----GKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----RNLQMLTD------- 239 (460)
Q Consensus 178 -----~~~~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~----~~~~~~~~------- 239 (460)
.....++..|+|||.+.+ ..++.++|||||||++|+|++|..||.......... .......+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE 239 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence 112245677999999975 358899999999999999999999986432111100 00000000
Q ss_pred -----------------------------ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 -----------------------------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 -----------------------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..........+++.+.+++.+||+.||++|||++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00000112235678999999999999999999999987
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-40 Score=311.84 Aligned_cols=254 Identities=22% Similarity=0.305 Sum_probs=205.5
Q ss_pred cccchhcccCCCCCCeEEEEEEc--------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 95 (460)
.++.+.+.||+|+||.||++... .+..+|+|.++..... ....+..|+.+++++ +||||+++++++..++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 45778999999999999999731 2457899998754322 245788999999999 6999999999999888
Q ss_pred eeEEEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~ 161 (460)
..+++|||+++++|.+++.... ...+++..+..++.|++.||.|||++| ++|+||||+|||++++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g-i~H~dlkp~Nill~~~ 170 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR-CIHRDLAARNVLVTED 170 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeeccccceeEEEcCC
Confidence 9999999999999999986532 235788999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccc
Q 012608 162 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 162 ~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 234 (460)
+.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|+|++ |..||.............
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~ 250 (314)
T cd05099 171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLR 250 (314)
T ss_pred CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999999999997654321 1223467999999988889999999999999999999 777776543322222111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.. .....+..++.++.+++.+||..+|++|||+.++++.|+.+...
T Consensus 251 ~~-----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 251 EG-----HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred cC-----CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 11 11123456678899999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=305.03 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=197.3
Q ss_pred chhcccCCCCCCeEEEEEEcC-Cc--EEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeC------Cee
Q 012608 29 NIVSEHGEKAPNVVYKGKLEN-QR--RIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DER 97 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~ 97 (460)
.+.+.||+|+||.||+|.... +. .||+|.++..... ..+.+.+|+.+++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999999544 43 6899988764322 256788999999999999999999987432 246
Q ss_pred EEEEEcCCCCCHHhhhhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 98 LLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
+++|||+++++|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||+++++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS-FIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhheEEcCCCCEEECCCCccc
Confidence 8999999999999877421 2345889999999999999999999999 9999999999999999999999999988
Q ss_pred cCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCC
Q 012608 174 NSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 174 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (460)
...... ...+++.|++||.+.+..++.++||||||+++|+|++ |..||............... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~ 235 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-----NRLKQ 235 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CCCCC
Confidence 654321 2235678999999988889999999999999999999 77777654332222211111 01123
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+..++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 236 PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 445678899999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=315.48 Aligned_cols=249 Identities=18% Similarity=0.181 Sum_probs=198.4
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
++|++++.||+|+||.||+++. .+++.||+|++.... ......+..|+.++..++|+||+++++++..++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688999999999999999995 468899999986422 122445888999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC--
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 179 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-- 179 (460)
||++||+|.+++... ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~-iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLH-YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred eCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 999999999998642 357899999999999999999999999 9999999999999999999999999987654322
Q ss_pred ---CccCCCcccCcccccc-----CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 180 ---SYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 180 ---~~~~t~~y~aPE~~~~-----~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
...||+.|+|||++.+ +.++.++|||||||++|+|++|+.||..................... ......++
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~~~~~ 237 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF-PSHITDVS 237 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccC-CCccccCC
Confidence 2468999999999865 45788999999999999999999998765433222221111110011 11123457
Q ss_pred HHHHHHHHHHcccCCCC--CCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRE--RPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~--Rps~~~il~ 277 (460)
.++.+++.+||...+.+ |++++++++
T Consensus 238 ~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 238 EEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred HHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 89999999999876554 357888776
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=302.84 Aligned_cols=247 Identities=25% Similarity=0.378 Sum_probs=204.2
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
++.+|++.+.||.|+||.||++.. +++.||+|.++... ....+.+|+.++++++||||+++++++..+ ..+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 356789999999999999999875 67889999986533 356789999999999999999999998654 57999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-CCcc
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYS 182 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~~~ 182 (460)
++|++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK-LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSK 158 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccCcceEEEcCCCcEEECCCccceeccccCCCCC
Confidence 99999999997655556899999999999999999999999 999999999999999999999999998764432 2233
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (460)
.+..|+|||.+.+..++.++|+||||+++|+|++ |..||............... .....+..++..+.+++.+|
T Consensus 159 ~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~ 233 (254)
T cd05083 159 LPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-----YRMEPPEGCPADVYVLMTSC 233 (254)
T ss_pred CCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-----CCCCCCCcCCHHHHHHHHHH
Confidence 4578999999988889999999999999999998 88887655433322221111 11122345678999999999
Q ss_pred cccCCCCCCChhHHHHHhc
Q 012608 262 LQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 262 l~~~p~~Rps~~~il~~L~ 280 (460)
|+.+|..||++.++++.|+
T Consensus 234 l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 234 WETEPKKRPSFHKLREKLE 252 (254)
T ss_pred cCCChhhCcCHHHHHHHHc
Confidence 9999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-40 Score=319.69 Aligned_cols=248 Identities=15% Similarity=0.204 Sum_probs=196.7
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeC------
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------ 94 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 94 (460)
-..+|++++.||+|+||.||++.. .+++.||||++..... .....+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 356789999999999999999994 4689999999875432 2356788999999999999999999987543
Q ss_pred CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
...|+||||++ ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLART 175 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence 35799999997 57777663 35788999999999999999999999 99999999999999999999999999976
Q ss_pred CCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccc-----------
Q 012608 175 SRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS----------- 240 (460)
Q Consensus 175 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----------- 240 (460)
.... ....+|..|+|||++.+..++.++|||||||++|+|++|+.||..................+
T Consensus 176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (364)
T cd07875 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255 (364)
T ss_pred cCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence 5443 34567899999999998889999999999999999999999986543211111100000000
Q ss_pred --------------c-----------ccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 241 --------------C-----------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 241 --------------~-----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. .........+..+.+++.+||+.||.+|||+.++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 000111123467899999999999999999999988
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=319.09 Aligned_cols=195 Identities=17% Similarity=0.201 Sum_probs=174.5
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-C-----CccceeeeEEeeCCeeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-N-----NRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~~iv~~~~~~~~~~~~~l 99 (460)
+|.|+..||+|+||.|-++. ..+++.||||+++... .-..+-..|+.+|..|+ | -|+|+++++|...+..||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 67899999999999999999 6679999999987543 22567778999999996 4 379999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC--CCeEEccCCCcccCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRD 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~--~~~kl~DFg~a~~~~~ 177 (460)
|+|.+. .+|.++++......++...++.++.||+.||..||..+ |||+||||+||||.+. ..+||+|||.+.....
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~-IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG-IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 999996 89999999877788999999999999999999999999 9999999999999644 4699999999887655
Q ss_pred C-CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCCh
Q 012608 178 G-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 224 (460)
Q Consensus 178 ~-~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~ 224 (460)
. -++..+..|+|||++.|.+|+.+.||||||||+.||++|.+.|++.
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 4 3667789999999999999999999999999999999999888776
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=322.75 Aligned_cols=254 Identities=18% Similarity=0.199 Sum_probs=207.5
Q ss_pred HHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 19 KNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 19 ~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
....+-=+.++|++.||-|+||.||++.. .++-..|-|++........+.+.-|++||..++||+||.+++.|..++.+
T Consensus 25 ~rdlnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkL 104 (1187)
T KOG0579|consen 25 YRDLNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKL 104 (1187)
T ss_pred hccCCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCce
Confidence 33334445689999999999999999984 34555678888777777788999999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC-
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR- 176 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~- 176 (460)
||+.|||.||.+...+.. -+..++++++..+.+|++.||.|||+++ |||||||..|||++-+|.++|+|||.+....
T Consensus 105 wiliEFC~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~~-iIHRDLKAGNiL~TldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 105 WILIEFCGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQN-IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred EEEEeecCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhcc-hhhhhccccceEEEecCcEeeecccccccchh
Confidence 999999999999887765 3568999999999999999999999999 9999999999999999999999999875433
Q ss_pred ---CCCCccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCc
Q 012608 177 ---DGKSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 177 ---~~~~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
...++.||+.|||||+.. +.+|+.++||||||++|.||..+.+|-..-..-...-..... ..+.---|.
T Consensus 183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---ePPTLlqPS 259 (1187)
T KOG0579|consen 183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTLLQPS 259 (1187)
T ss_pred HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---CCCcccCcc
Confidence 235789999999999864 467999999999999999999999665432221111111110 111112344
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+..+.+|+.+||..||..||++.++++
T Consensus 260 ~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 260 HWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred hhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 56789999999999999999999999886
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=321.95 Aligned_cols=252 Identities=20% Similarity=0.293 Sum_probs=202.9
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCC-CCccceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLR-NNRLTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 97 (460)
+++.+.+.||+|+||.||+|++. .++.||+|+++...... .+.+.+|+.++.++. ||||+++++++..++..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 56778899999999999999853 34689999997654333 457889999999997 99999999999998999
Q ss_pred EEEEEcCCCCCHHhhhhccCC-----------------------------------------------------------
Q 012608 98 LLVAEYMPNETLAKHLFHWET----------------------------------------------------------- 118 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~----------------------------------------------------------- 118 (460)
++||||++||+|.+++.....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 999999999999998864211
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC
Q 012608 119 -------------------------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161 (460)
Q Consensus 119 -------------------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~ 161 (460)
..+++..+..++.|++.||.|||+.+ ++||||||+|||++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrdlkp~NiLl~~~ 275 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN-CVHRDLAARNVLICEG 275 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-cCcccCCcceEEEeCC
Confidence 13567778899999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccc
Q 012608 162 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 162 ~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 234 (460)
+.+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++|||++ |..||.............
T Consensus 276 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~ 355 (401)
T cd05107 276 KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAI 355 (401)
T ss_pred CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHH
Confidence 99999999998754321 22345778999999988889999999999999999998 777775432211111100
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
. .......+..++.++.+++.+||..+|.+||+++++++.|+.+
T Consensus 356 ~----~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 356 K----RGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred H----cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0 0111123445678999999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=305.01 Aligned_cols=250 Identities=22% Similarity=0.297 Sum_probs=203.5
Q ss_pred cccchhcccCCCCCCeEEEEEEc-C---CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-N---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.+|++.+.||+|+||.||+|... + +..+|+|.++..... ..+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56788999999999999999843 2 347999998754322 246789999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 180 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~ 180 (460)
|||++|++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 84 TEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 999999999999864 2356899999999999999999999999 99999999999999999999999999876543221
Q ss_pred -------ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 181 -------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 181 -------~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
..++..|++||.+.+..++.++|+||||+++|++++ |..||................. ...+..+++
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 236 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-----LPAPMDCPA 236 (267)
T ss_pred eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc-----CCCCCCCCH
Confidence 122457999999988889999999999999999886 9988765432222111111111 112335678
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
.+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 237 ALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 899999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=308.30 Aligned_cols=249 Identities=17% Similarity=0.224 Sum_probs=204.7
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
....|+++++||.|+||.||++.. .++..||+|.++.......+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 456799999999999999999995 4689999999876554456679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++|++|.+++.. ....+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (280)
T cd06611 83 FCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHK-VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR 160 (280)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence 9999999998864 2357999999999999999999999999 999999999999999999999999987654322
Q ss_pred CCccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 179 KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
....++..|++||.+. ...++.++|+||||+++|+|++|+.||............... .......+..++.+
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 237 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS---EPPTLDQPSKWSSS 237 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC---CCCCcCCcccCCHH
Confidence 2345788999999874 344678999999999999999999888654322111111110 01111223456788
Q ss_pred HHHHHHHHcccCCCCCCChhHHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+++.+||+.+|.+||++.++++
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 238 FNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred HHHHHHHHhccChhhCcCHHHHhc
Confidence 999999999999999999999987
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=303.46 Aligned_cols=242 Identities=19% Similarity=0.298 Sum_probs=200.9
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---------HHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
|.+.+.||.|++|.||+|.. .+++.+|+|.+....... .+.+.+|+.++++++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 56678899999999999984 468999999886544332 14688999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
+++|||++|++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+++....
T Consensus 82 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~-ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRG-IIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred EEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcC-cccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 999999999999999963 456889999999999999999999999 99999999999999999999999998876542
Q ss_pred C----------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 178 G----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 178 ~----------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
. ....++..|+|||.+.+..++.++|+|||||++|+|++|+.||.............. ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~ 233 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE-----NASPEIP 233 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-----cCCCcCC
Confidence 1 123577899999999888889999999999999999999999865322111110000 1122344
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...+..+.+++.+||+.+|.+||++.++++
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 567789999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=300.52 Aligned_cols=242 Identities=28% Similarity=0.419 Sum_probs=199.9
Q ss_pred cccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHH
Q 012608 32 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLA 110 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~ 110 (460)
+.||.|+||.||++...+++.|++|++...... ....+..|++++++++||||+++++++...+..++||||++|++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999999666999999998765543 3567999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC------CccCC
Q 012608 111 KHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------SYSTN 184 (460)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~------~~~~t 184 (460)
+++.. ....+++..+..++.+++.+|.|||+++ ++||||+|+||+++.++.++|+|||++....... ....+
T Consensus 81 ~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~-i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 81 TFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 98864 2346889999999999999999999999 9999999999999999999999999987654221 12235
Q ss_pred CcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 012608 185 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263 (460)
Q Consensus 185 ~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (460)
..|+|||.+.++.++.++|+||||+++|+|+| |..||............... .....+...+..+.+++.+||.
T Consensus 159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~ 233 (251)
T cd05041 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-----YRMPAPQLCPEEIYRLMLQCWA 233 (251)
T ss_pred eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-----CCCCCCccCCHHHHHHHHHHhc
Confidence 67999999988889999999999999999999 67776554332222211111 1112344567899999999999
Q ss_pred cCCCCCCChhHHHHHhc
Q 012608 264 YEPRERPNPKSLVTALS 280 (460)
Q Consensus 264 ~~p~~Rps~~~il~~L~ 280 (460)
.+|.+|||+.++++.|+
T Consensus 234 ~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 234 YDPENRPSFSEIYNELQ 250 (251)
T ss_pred cChhhCcCHHHHHHHhh
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-40 Score=305.13 Aligned_cols=242 Identities=18% Similarity=0.266 Sum_probs=203.3
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC-CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
+|++++.||.|++|.||+|.. .+|+.|++|.+.... ......+.+|+++++.++||||+++++++..+...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 578889999999999999994 468999999987554 333567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEG-KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999999853 37899999999999999999999999 999999999999999999999999998765533 34
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch-hHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD-DGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 259 (460)
..++..|+|||.+.+..++.++||||||+++|+|+||..||............... .....+.. ++.++.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-----NPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-----CCCCCcccccCHHHHHHHH
Confidence 56788899999998888999999999999999999999888543322111111111 11122222 6788999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||..+|++|||++++++
T Consensus 233 ~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 233 LCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHhhCChhhCcCHHHHhh
Confidence 999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=305.13 Aligned_cols=245 Identities=13% Similarity=0.196 Sum_probs=198.1
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeC------CeeE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG------DERL 98 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~------~~~~ 98 (460)
.|++.+.||.|+||.||+|.. .+++.||+|++.... .....+.+|+.+++++ +||||+++++++... ...+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 456778899999999999984 468999999986543 3456788999999999 799999999998653 4588
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 177 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~- 177 (460)
++|||+++++|.+++.......+++..+..++.|++.||.|||+++ |+|+||||+||++++++.++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~ 164 (272)
T cd06637 86 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 164 (272)
T ss_pred EEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHEEECCCCCEEEccCCCceecccc
Confidence 9999999999999987644567899999999999999999999999 99999999999999999999999999875432
Q ss_pred ---CCCccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 178 ---GKSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 178 ---~~~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
.....|+..|+|||++. +..++.++|||||||++|+|++|..||............ ............
T Consensus 165 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~ 240 (272)
T cd06637 165 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PRNPAPRLKSKK 240 (272)
T ss_pred cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH----hcCCCCCCCCCC
Confidence 23456788999999986 335788999999999999999999887543221111110 111111122334
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++..+.+++.+||..+|.+|||+.++++
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 241 WSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 6678999999999999999999999986
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=307.80 Aligned_cols=252 Identities=19% Similarity=0.279 Sum_probs=204.9
Q ss_pred CCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+..+|++++.||+|+||+||++. ..+|+.||+|++...... ..+.+.+|+++++.++||||+++++++...+.+++||
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 34678999999999999999999 456899999988654322 3568999999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCCeEEccCCCcccCCC--C
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--G 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~--~ 178 (460)
||+++++|.+++.. .+.+++..+..++.+++.+|.|||+ .+ ++|+||+|+||++++++.++|+|||++..... .
T Consensus 83 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~ 159 (284)
T cd06620 83 EFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHR-IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159 (284)
T ss_pred ecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcC-eeccCCCHHHEEECCCCcEEEccCCcccchhhhcc
Confidence 99999999998863 4578999999999999999999997 46 99999999999999999999999998765432 2
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh----h---ccccccccccccCCCC-chh
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----D---RNLQMLTDSCLEGQFT-DDD 250 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~----~---~~~~~~~~~~~~~~~~-~~~ 250 (460)
....++..|+|||++.+..++.++|+|||||++|+++||..||......... . ........... ..++ ..+
T Consensus 160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (284)
T cd06620 160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP-PRLPSSDF 238 (284)
T ss_pred CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC-CCCCchhc
Confidence 3456889999999998888899999999999999999999998654321000 0 00011111111 1111 236
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHHHh
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~~L 279 (460)
+.++.+++.+||..||.+|||+.++++..
T Consensus 239 ~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 239 PEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 67899999999999999999999999853
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=308.68 Aligned_cols=253 Identities=19% Similarity=0.274 Sum_probs=198.6
Q ss_pred ccchhcccCCCCCCeEEEEEEc-----------------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceee
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-----------------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLL 88 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~ 88 (460)
+|++.+.||+|+||.||++... ++..||+|.++..... ....+.+|+.+++.++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5788999999999999998532 2446899998765332 246799999999999999999999
Q ss_pred eEEeeCCeeEEEEEcCCCCCHHhhhhccCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc
Q 012608 89 GCCCEGDERLLVAEYMPNETLAKHLFHWET---------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159 (460)
Q Consensus 89 ~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~ 159 (460)
+++..++..+++|||+++++|.+++..... ..+++..+..++.|++.||+|||+.+ ++|+||||+|||++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dlkp~Nili~ 164 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC-eecccCChheEEEc
Confidence 999999999999999999999998864321 24677889999999999999999999 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh--CCCCCCChhhhhhhh
Q 012608 160 EDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRD 231 (460)
Q Consensus 160 ~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t--g~~p~~~~~~~~~~~ 231 (460)
.++.++|+|||++....... ...++..|++||...++.++.++|||||||++|||++ |..|+..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 99999999999987653321 2233578999999888889999999999999999998 556664332221111
Q ss_pred ccccccc--cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 232 RNLQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 232 ~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
....... ........+..+++.+.+++.+||+.||.+|||+.++++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1000000 000001123456689999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=307.85 Aligned_cols=252 Identities=22% Similarity=0.315 Sum_probs=201.7
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
.+|++++.||+|+||.||+|... .+..||+|.++..... ....+.+|+.++++++||||+++++++...+..+
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL 85 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 46888999999999999999742 2458999988654322 2346888999999999999999999999889999
Q ss_pred EEEEcCCCCCHHhhhhccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCC
Q 012608 99 LVAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 170 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg 170 (460)
+||||++|++|.+++.... ...++...+..++.|++.||.|||+++ |+||||||+||++++++.++|+|||
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dikp~nili~~~~~~~L~Dfg 164 (288)
T cd05061 86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK-FVHRDLAARNCMVAHDFTVKIGDFG 164 (288)
T ss_pred EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCCChheEEEcCCCcEEECcCC
Confidence 9999999999999996422 133466788999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccccccc
Q 012608 171 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 171 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
+++..... ....++..|+|||.+.++.++.++|||||||++|+|++ |..||............... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~ 239 (288)
T cd05061 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-----GY 239 (288)
T ss_pred ccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CC
Confidence 98754322 12234677999999988889999999999999999998 67677554332222211111 01
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
...+...++.+.+++.+||+.+|++|||+.++++.|....
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 240 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1233455689999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=301.99 Aligned_cols=245 Identities=16% Similarity=0.198 Sum_probs=202.8
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEee-CCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 102 (460)
.|++++.||.|++|.||++.. .+++.|++|++...... ..+.+.+|++++++++|||++++++.+.. ++..+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 378899999999999999994 45889999998654332 34578899999999999999999998764 446789999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|+++++|.+++.......+++.++..++.|++.|+.+||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~-i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH-ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 999999999987544567899999999999999999999999 999999999999999999999999998755432
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
....+++.|+|||.+.+..++.++|+||||+++++|++|+.||................ ....+...++.+.+++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li 234 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-----LPPMPKDYSPELGELI 234 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-----CCCCccccCHHHHHHH
Confidence 33457889999999998889999999999999999999999886543322211111111 1123456778999999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||+.+|.+|||+.++++
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 235 ATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHHhccCcccCCCHHHHhc
Confidence 9999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=300.59 Aligned_cols=248 Identities=22% Similarity=0.335 Sum_probs=203.7
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.+++++.+.||.|+||.||++...+++.+|+|.+..... ....+.+|++++++++||||+++++++......+++|||+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 457888999999999999999976788999999865432 3567999999999999999999999999889999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----- 179 (460)
+|++|.+++.. ..+.+++..++.++.|++.+++|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 82 EHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSN-VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 99999998864 2346889999999999999999999999 9999999999999999999999999887543321
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...++..|+|||.+.++.++.++||||||+++|+|++ |..||................ ....+...+..+.+|+
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~ 234 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF-----RLYKPRLASQSVYELM 234 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC-----CCCCCCCCCHHHHHHH
Confidence 2234568999999988889999999999999999998 887775443322222111110 1112233568899999
Q ss_pred HHHcccCCCCCCChhHHHHHhc
Q 012608 259 SRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~ 280 (460)
.+||..+|++|||+.++++.|.
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 235 QHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHcccChhhCCCHHHHHHhhC
Confidence 9999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=301.49 Aligned_cols=248 Identities=17% Similarity=0.207 Sum_probs=204.8
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
++|++.+.+|.|+||.||++.. .+++.+++|++........+.+.+|+.++++++||||+++++++..++..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 3577889999999999999995 468899999998766556788999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ..
T Consensus 83 ~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (262)
T cd06613 83 GGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETG-KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS 160 (262)
T ss_pred CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence 99999998864 2357899999999999999999999999 999999999999999999999999998765432 33
Q ss_pred ccCCCcccCccccccC---CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc-cccccccccccCCCCchhHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~---~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
..++..|+|||.+.+. .++.++|+||||+++|+|+||..|+........... ........ ....+...+.++.+
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 238 (262)
T cd06613 161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP--KLKDKEKWSPVFHD 238 (262)
T ss_pred ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc--cccchhhhhHHHHH
Confidence 4678889999998766 788999999999999999999988865432111111 11101111 11123345678999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||..+|.+|||+.+++.
T Consensus 239 li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 239 FIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHHHcCCChhhCCCHHHHhc
Confidence 999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=338.77 Aligned_cols=248 Identities=17% Similarity=0.210 Sum_probs=196.5
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEee--CCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 99 (460)
+.+|.+++.||.|+||+||++.. .++..||+|++...... ....+..|+.++++|+||||+++++++.. ...+|+
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 45789999999999999999994 45889999998754332 24678999999999999999999998854 356899
Q ss_pred EEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC------CcccccccCCcEEEcC-----------
Q 012608 100 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG------RALYHDLNAYRILFDE----------- 160 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~------~iiH~Dikp~Nill~~----------- 160 (460)
||||+++++|.+++... ..+.+++..++.|+.||+.||.|||+.+ +||||||||+|||++.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 99999999999988642 2357999999999999999999999832 2999999999999964
Q ss_pred ------CCCeEEccCCCcccCCCC---CCccCCCcccCcccccc--CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh
Q 012608 161 ------DGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 229 (460)
Q Consensus 161 ------~~~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~ 229 (460)
.+.+||+|||++...... ....||+.|+|||++.+ ..++.++|||||||++|+|+||..||........
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~q 251 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ 251 (1021)
T ss_pred ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHH
Confidence 234899999998765432 34568999999999864 3478999999999999999999999864321111
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 230 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......... .......+.++.+||..||..+|.+||++.+++.
T Consensus 252 li~~lk~~p-----~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 252 LISELKRGP-----DLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHhcCC-----CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 101111000 0111245688999999999999999999999985
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-40 Score=307.61 Aligned_cols=250 Identities=23% Similarity=0.312 Sum_probs=202.4
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
.+|++++.||.|+||.||++... ++..||+|.+...... ....+.+|+.++++++||||+++++++..++..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 46788899999999999999853 4688999998754432 2457889999999999999999999999989999
Q ss_pred EEEEcCCCCCHHhhhhccC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE
Q 012608 99 LVAEYMPNETLAKHLFHWE--------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill 158 (460)
++|||+++++|.+++.... ...+++..++.++.|++.||.|||+++ ++||||||+||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~-i~H~dl~p~nil~ 163 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK-FVHRDLATRNCLV 163 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-eecccccHhheEe
Confidence 9999999999999986321 124678889999999999999999999 9999999999999
Q ss_pred cCCCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhh
Q 012608 159 DEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRD 231 (460)
Q Consensus 159 ~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~ 231 (460)
++++.++|+|||++...... .....+..|+|||.+.+..++.++|||||||++|+|++ |..||.+........
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~ 243 (288)
T cd05050 164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY 243 (288)
T ss_pred cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999988754322 12234667999999988889999999999999999998 777775443322211
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcc
Q 012608 232 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~ 281 (460)
..... . ....+..++.++.+++.+||+.+|.+|||+.++++.|+.
T Consensus 244 ~~~~~----~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 244 YVRDG----N-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHhcC----C-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11111 0 112234567899999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=305.86 Aligned_cols=253 Identities=18% Similarity=0.235 Sum_probs=205.5
Q ss_pred cccchhcccCCCCCCeEEEEEEcC-----CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEee-CCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN-----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~ 98 (460)
++|++.+.||+|+||.||+|.... +..|++|.++..... ....+.+|+.++++++||||+++++++.. +...+
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 85 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF 85 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence 467788899999999999999654 688999988754322 25678899999999999999999998766 46788
Q ss_pred EEEEcCCCCCHHhhhhccCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCc
Q 012608 99 LVAEYMPNETLAKHLFHWET------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 172 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a 172 (460)
+++||+++++|.+++..... ..+++..++.++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++
T Consensus 86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kl~d~g~~ 164 (280)
T cd05043 86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG-VIHKDIAARNCVIDEELQVKITDNALS 164 (280)
T ss_pred EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCHhhEEEcCCCcEEECCCCCc
Confidence 99999999999998864322 46889999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCC
Q 012608 173 KNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245 (460)
Q Consensus 173 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (460)
+...... ...++..|+|||.+.+..++.++|||||||++|++++ |+.||.......+........ ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~~ 239 (280)
T cd05043 165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-----RLA 239 (280)
T ss_pred ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-----CCC
Confidence 7653321 2345678999999988889999999999999999999 888886543322222111111 111
Q ss_pred CCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.+..+++++.+++.+||..+|++|||+.++++.|+.+..
T Consensus 240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 233456889999999999999999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=313.19 Aligned_cols=254 Identities=21% Similarity=0.278 Sum_probs=209.3
Q ss_pred cchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 28 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
..+.++||+|-||.|.++....+..||||+++...... ...|.+|+++|.+|+||||+.++|+|..++.+++|+|||++
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn 619 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN 619 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence 45679999999999999998888999999999877665 47899999999999999999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC------C
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------S 180 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~------~ 180 (460)
|+|.+++..+....+.-....+|+.||+.|++||.+-+ +|||||.+.|+|++.++++||+|||+++..-... .
T Consensus 620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n-fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN-FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc-hhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 99999998654333455667789999999999999999 9999999999999999999999999998543332 2
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh--CCCCCCChhhhhhhhccccccccccc--cCCCCchhHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS--GKHIPPSHALDLIRDRNLQMLTDSCL--EGQFTDDDGTELVR 256 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 256 (460)
..-++.|||||.+.-+++|.+||+|+||+++||+++ ...|+.....+..-+..-..+.+... -...|.-++..+.+
T Consensus 699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lye 778 (807)
T KOG1094|consen 699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYE 778 (807)
T ss_pred eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHH
Confidence 233689999999999999999999999999999865 45666544333222221111111111 12345678899999
Q ss_pred HHHHHcccCCCCCCChhHHHHHhccc
Q 012608 257 LASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
++.+||..+-++|||++++...|+..
T Consensus 779 lml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 779 LMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 99999999999999999999888654
|
|
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-40 Score=309.77 Aligned_cols=252 Identities=18% Similarity=0.272 Sum_probs=201.6
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
..+..|.++++||.|+||.||+|.. .+++.||+|.++.... .....+.+|+.++++++||||+++++++..++..++|
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 3 GKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 4567899999999999999999985 4689999999875432 2345788999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|||++ ++|.+.+.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 83 FEYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred Eeccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 99997 689888764 2456889999999999999999999999 999999999999999999999999998754322
Q ss_pred --CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc-----------ccc-------
Q 012608 179 --KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-----------QML------- 237 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~-----------~~~------- 237 (460)
....+++.|+|||.+.+. .++.++|||||||++|+|+||+.||............. ...
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 233567899999998654 47889999999999999999999887543321110000 000
Q ss_pred --ccccc----cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 --TDSCL----EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 --~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+.. .......+++.+.++|.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000 00112346778999999999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=312.41 Aligned_cols=249 Identities=18% Similarity=0.167 Sum_probs=198.5
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||+|+||.||++... +++.+|+|++.... ......+..|+.++..++|+||+++++++...+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 5788999999999999999954 58899999985421 1224458889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++||+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~-iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999964 2356899999999999999999999999 999999999999999999999999998654322
Q ss_pred -CCccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 -KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....||+.|+|||++. ...++.++|||||||++|+|++|+.||.................... .......+++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~-~p~~~~~~s~ 238 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ-FPAQVTDVSE 238 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc-CCCccccCCH
Confidence 2346899999999986 24578899999999999999999999876543332222211111100 1112235678
Q ss_pred HHHHHHHHHcccCCCC--CCChhHHHHH
Q 012608 253 ELVRLASRCLQYEPRE--RPNPKSLVTA 278 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~--Rps~~~il~~ 278 (460)
++.+++.+|+..++.+ |+++.++++.
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 9999999999765554 5789998874
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=307.86 Aligned_cols=256 Identities=22% Similarity=0.322 Sum_probs=205.0
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-----CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEee--CCe
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDE 96 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 96 (460)
...+++++.||.|+||.||++... +++.||||+++..... ..+.+.+|+++++.++||||+++++++.. +..
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 456788899999999999999843 3789999999765543 35689999999999999999999999876 557
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.+++|||+++++|.+++... ...+++..+..++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++....
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQR-YIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred eEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 89999999999999998642 235899999999999999999999999 9999999999999999999999999988765
Q ss_pred CCC-------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh----------hcccccccc
Q 012608 177 DGK-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNLQMLTD 239 (460)
Q Consensus 177 ~~~-------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~----------~~~~~~~~~ 239 (460)
... ...++..|++||.+.+..++.++||||||+++++|+||..|+......... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 321 123345699999998888999999999999999999999876543221110 000000000
Q ss_pred ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
.......+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111122345568899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=301.96 Aligned_cols=250 Identities=22% Similarity=0.314 Sum_probs=203.6
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
+|++++.||.|+||+||+|.. .++..+++|++...... ....+.+|+.+++.++|+||+++++.+..++..+++||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 578899999999999999994 46889999998754422 4578999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 105 PNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
+|++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~-i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG-QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999865332 56899999999999999999999999 9999999999999999999999999887554332
Q ss_pred ----CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 180 ----SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 180 ----~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
...++..|++||.+... ..+.++|+||||+++++|++|+.||............................+++.+
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSF 240 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHH
Confidence 23578899999998776 6889999999999999999999988654322111111111111111111123567889
Q ss_pred HHHHHHHcccCCCCCCChhHHHH
Q 012608 255 VRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+++.+||..||.+|||+.++++
T Consensus 241 ~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 241 RKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred HHHHHHHcCCChhhCcCHHHHhh
Confidence 99999999999999999999987
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-40 Score=315.63 Aligned_cols=249 Identities=18% Similarity=0.255 Sum_probs=196.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeC------
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------ 94 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 94 (460)
....|++++.||.|+||.||++.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 345688999999999999999984 56899999998754322 245678999999999999999999987533
Q ss_pred CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
...+++++++ |++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG-IIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred CcEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCChhhEEECCCCCEEEcCCcccee
Confidence 3468999998 689988774 457999999999999999999999999 99999999999999999999999999886
Q ss_pred CCCC-CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-----------cc----
Q 012608 175 SRDG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------ML---- 237 (460)
Q Consensus 175 ~~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-----------~~---- 237 (460)
.... ....+|..|+|||++.+ ..++.++|||||||++|+|++|+.||.............. ..
T Consensus 168 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (343)
T cd07878 168 ADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEH 247 (343)
T ss_pred cCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhh
Confidence 5443 34578999999999876 4588999999999999999999998865322110000000 00
Q ss_pred -------cccccc---CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 -------TDSCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 -------~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...... .......++.+.+++.+||+.||.+|||+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 248 ARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 0011234567889999999999999999999997
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=310.06 Aligned_cols=246 Identities=20% Similarity=0.204 Sum_probs=202.9
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++.+.||.|++|.||++... +++.||+|.+...... ..+.+..|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 5778899999999999999954 5999999998765433 34578899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|+.|++|.+++....+..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG-IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999999987555567999999999999999999999999 999999999999999999999999987643221
Q ss_pred -----------------------------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh
Q 012608 179 -----------------------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI 229 (460)
Q Consensus 179 -----------------------------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~ 229 (460)
....|+..|+|||.+.+..++.++||||||+++|+|++|..||........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 123567889999999888899999999999999999999999865533222
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCC----hhHHHH
Q 012608 230 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN----PKSLVT 277 (460)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~il~ 277 (460)
....... ..........+..+.+++.+||..+|++||| +.+++.
T Consensus 241 ~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 241 FSNILKK----EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHHhcC----CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 1111111 0110111226789999999999999999999 777776
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=303.43 Aligned_cols=249 Identities=21% Similarity=0.279 Sum_probs=201.8
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCc---EEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQR---RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
++...+.||+|+||.||+|... ++. .+++|+++..... ..+.+..|++++++++||||+++.+++...+..++||
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT 85 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence 3456778899999999999854 333 7999998755322 2567899999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC-
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS- 180 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~- 180 (460)
||+++++|.+++.. ..+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 86 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~-i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 163 (268)
T cd05063 86 EYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMN-YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG 163 (268)
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence 99999999998864 3357899999999999999999999999 99999999999999999999999999875543211
Q ss_pred ------ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 181 ------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 181 ------~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
...+..|+|||.+.+..++.++|||||||++|++++ |..||................ ....+..++..
T Consensus 164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~ 238 (268)
T cd05063 164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-----RLPAPMDCPSA 238 (268)
T ss_pred ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-----CCCCCCCCCHH
Confidence 112457999999988888999999999999999997 998886543322222211111 11123346788
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 239 ~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 239 VYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-41 Score=288.94 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=201.0
Q ss_pred CCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 100 (460)
...+.++++.||.|+.|+|++++ ..+|..+|||.+.+.... ..++++..+.++... ++|.||+.+|+|..+...++.
T Consensus 90 dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic 169 (391)
T KOG0983|consen 90 DINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC 169 (391)
T ss_pred ChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence 34556788999999999999999 556999999999765432 355677788877766 589999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~- 179 (460)
||.|. ..+..+++ +-.+++++..+-++...++.||.||..+..|+|||+||+|||+|+.|++||||||++.+..+..
T Consensus 170 MelMs-~C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 170 MELMS-TCAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHHHH-HHHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc
Confidence 99994 44555444 3567899999999999999999999987669999999999999999999999999998776553
Q ss_pred --CccCCCcccCcccccc---CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh-hhccccccccccccCCCCchhHHH
Q 012608 180 --SYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-RDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 180 --~~~~t~~y~aPE~~~~---~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
...|-+.|||||.+.- ..|+.++||||||++++||.||+.|+.+...+.. ........+ +.++. ...+++.
T Consensus 248 htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-P~L~~--~~gFSp~ 324 (391)
T KOG0983|consen 248 HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-PLLPG--HMGFSPD 324 (391)
T ss_pred cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC-CCCCc--ccCcCHH
Confidence 4467789999999853 3488999999999999999999999987533322 222222222 22221 2237899
Q ss_pred HHHHHHHHcccCCCCCCChhHHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++|+..||+.|+.+||...++++
T Consensus 325 F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 325 FQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHHHHHhhcCcccCcchHHHhc
Confidence 999999999999999999999988
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=301.24 Aligned_cols=238 Identities=25% Similarity=0.366 Sum_probs=191.7
Q ss_pred cccCCCCCCeEEEEEEcC-C----------cEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 32 SEHGEKAPNVVYKGKLEN-Q----------RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
+.||+|+||.||+|...+ + ..|++|.+...... ...+.+|+.++++++||||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 358999999999999644 3 25788887655433 6789999999999999999999999887 778999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-------CeEEccCCCcc
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-------NPRLSTFGLMK 173 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-------~~kl~DFg~a~ 173 (460)
|||+++++|.+++... ...+++..+..++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||++.
T Consensus 79 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 79 EEYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKK-LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EEcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCC-eecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 9999999999998752 236899999999999999999999999 99999999999999887 79999999988
Q ss_pred cCCCCCCccCCCcccCccccccC--CCCCCCceehHHHHHHHHhhC-CCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 174 NSRDGKSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 174 ~~~~~~~~~~t~~y~aPE~~~~~--~~~~~sDi~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
.........++..|+|||.+.+. .++.++||||||+++|+|++| ..|+............ . .....+...
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~-~------~~~~~~~~~ 229 (259)
T cd05037 157 TVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY-Q------DQHRLPMPD 229 (259)
T ss_pred ccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHH-h------cCCCCCCCC
Confidence 76665556677889999999876 688999999999999999995 4444332111111100 0 001112222
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
...+.+++.+||..+|.+|||+.++++.|+
T Consensus 230 ~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 230 CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 378999999999999999999999999774
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=302.37 Aligned_cols=245 Identities=23% Similarity=0.303 Sum_probs=196.2
Q ss_pred ccCCCCCCeEEEEEEc-CCc--EEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 33 EHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
.||+|+||.||+|... +|. .+++|.++..... ..+.+.+|++++.++ +||||+++++++...+..+++|||++++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 5799999999999954 444 4688888754322 346788999999999 8999999999999999999999999999
Q ss_pred CHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 108 TLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 108 sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
+|.+++.... ...+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999986422 124788999999999999999999999 9999999999999999999999999975
Q ss_pred cCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 174 NSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 174 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
..... .....+..|+|||++.+..++.++|||||||++++|++ |..||............... .....+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-----YRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC-----CCCCCCCc
Confidence 33211 12223567999999988889999999999999999997 88888654332222111111 11123345
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
++.++.+++.+||..+|.+|||+.++++.|..+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 6678999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=299.51 Aligned_cols=242 Identities=22% Similarity=0.311 Sum_probs=196.9
Q ss_pred cccCCCCCCeEEEEEE-cC---CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-EN---QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
++||+|+||.||+|.. .. +..+|+|.+...... ..+.+.+|++++++++||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 4689999999999974 22 278999998765543 3567899999999999999999999875 5568999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC------
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS------ 180 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~------ 180 (460)
++|.+++.. ...+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~-i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKH-FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcC-eeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999974 346899999999999999999999999 99999999999999999999999999876543321
Q ss_pred -ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 181 -YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 181 -~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
..++..|+|||.+.+..++.++||||||+++|++++ |..||............... .....+..++..+.+++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li 231 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-----ERLPRPEECPQEIYSIM 231 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHH
Confidence 112457999999988889999999999999999998 88887543322111111111 11123445678999999
Q ss_pred HHHcccCCCCCCChhHHHHHhccc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
.+||..+|++|||+.++++.|+.+
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 232 LSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred HHHhcCChhhCcCHHHHHHHHHhc
Confidence 999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=323.61 Aligned_cols=242 Identities=19% Similarity=0.204 Sum_probs=191.4
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.|.+.+.||.|+||.||++... +++.||||... ...+.+|++++++++||||+++++++..++..++|||++.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 4788999999999999999954 58899999632 2346789999999999999999999999999999999996
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------C
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------K 179 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------~ 179 (460)
++|.+++.. ....+++..++.|+.|++.||.|||+++ |+||||||+|||++.++.++|+|||+++..... .
T Consensus 244 -~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 244 -SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEG-IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 788887754 2347999999999999999999999999 999999999999999999999999998754322 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChh------------hhhhhhcccc--ccccc-----
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA------------LDLIRDRNLQ--MLTDS----- 240 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~------------~~~~~~~~~~--~~~~~----- 240 (460)
...||..|+|||++.+..++.++|||||||++|||++|..++.... ...+...... .....
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 3468999999999998889999999999999999999875542211 0111110000 00000
Q ss_pred ------------cccCCC-----CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 241 ------------CLEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 241 ------------~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...... ....+.++.+||.+||+.||.+|||+.++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 000000 0123457899999999999999999999998
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=314.50 Aligned_cols=254 Identities=22% Similarity=0.304 Sum_probs=200.5
Q ss_pred cccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcC-CCCccceeeeEEeeC-Ce
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQL-RNNRLTNLLGCCCEG-DE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~-~~ 96 (460)
++|++++.||.|+||.||+|.. .+++.||||.++...... ...+.+|+.++.++ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 3688999999999999999973 347899999997644322 45688999999999 789999999987654 56
Q ss_pred eEEEEEcCCCCCHHhhhhccC-----------------------------------------------------------
Q 012608 97 RLLVAEYMPNETLAKHLFHWE----------------------------------------------------------- 117 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~----------------------------------------------------------- 117 (460)
.+++|||++||+|.+++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 789999999999999886421
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------CCccCCC
Q 012608 118 ------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNL 185 (460)
Q Consensus 118 ------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------~~~~~t~ 185 (460)
...+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++...... ....++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 123677888999999999999999999 999999999999999999999999998764322 1233456
Q ss_pred cccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHccc
Q 012608 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 264 (460)
Q Consensus 186 ~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 264 (460)
.|+|||.+.+..++.++||||||+++|+|++ |..|++............. .......+...++++.+++..||+.
T Consensus 246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~cl~~ 321 (343)
T cd05103 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCWHG 321 (343)
T ss_pred ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh----ccCCCCCCCCCCHHHHHHHHHHccC
Confidence 7999999988889999999999999999997 8877754321111000000 0011122334567899999999999
Q ss_pred CCCCCCChhHHHHHhccccc
Q 012608 265 EPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 265 ~p~~Rps~~~il~~L~~~~~ 284 (460)
+|++|||+.++++.|+.+..
T Consensus 322 ~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 322 EPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999987754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=307.40 Aligned_cols=249 Identities=18% Similarity=0.248 Sum_probs=202.2
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
++|++++.||+|+||.||++... +|+.||+|.++..... ....+.+|+.++++++||||+++++.+...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36889999999999999999954 6999999988654322 245788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--C
Q 012608 104 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--~ 179 (460)
++|++|.+++.... ...+++..+..++.|++.||.|||+. + ++|+||||+||+++.++.++|+|||++...... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN-IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK 159 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC-EeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc
Confidence 99999998886421 23789999999999999999999974 7 999999999999999999999999998765332 3
Q ss_pred CccCCCcccCccccccCC------CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 180 SYSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~------~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
...++..|+|||.+.+.. ++.++|+|||||++|+|++|+.||............ ..... ......+..++.+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~ 237 (286)
T cd06622 160 TNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQL-SAIVD-GDPPTLPSGYSDD 237 (286)
T ss_pred cCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHH-HHHhh-cCCCCCCcccCHH
Confidence 345778999999985443 478999999999999999999998654332221111 01111 1122345567889
Q ss_pred HHHHHHHHcccCCCCCCChhHHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+++.+||+.+|++||++.+++.
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 238 AQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred HHHHHHHHcccCcccCCCHHHHhc
Confidence 999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=309.26 Aligned_cols=247 Identities=19% Similarity=0.254 Sum_probs=198.5
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 100 (460)
+=..|+++++||+||.+.||++.-.+.+.+|+|++.....+ ....|..|+..|.+| .|.+|+++++|-..++.+|||
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 33679999999999999999999878888998887655433 367899999999999 699999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~- 179 (460)
|||=+ .+|..++.........+ .++.+..|++.++.++|.+| |||.||||.|+|+- .|.+||+|||+|.......
T Consensus 439 mE~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g-IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 439 MECGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG-IVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred eeccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc-eeecCCCcccEEEE-eeeEEeeeechhcccCcccc
Confidence 99976 89999997543333333 78889999999999999999 99999999999997 5689999999999877653
Q ss_pred -----CccCCCcccCccccccC-----------CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccccccc
Q 012608 180 -----SYSTNLAFTPPEYLRTG-----------RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 180 -----~~~~t~~y~aPE~~~~~-----------~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
+..||+.||+||.+... +.+.+||||||||+||+|+.|+.||..-. ..+ ..+..+.++...
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-n~~--aKl~aI~~P~~~ 591 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-NQI--AKLHAITDPNHE 591 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-HHH--HHHHhhcCCCcc
Confidence 46899999999998532 26789999999999999999998774321 111 122233333222
Q ss_pred CCCCchh-HHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 244 GQFTDDD-GTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 244 ~~~~~~~-~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
-+++.-- ..++.+++..||.+||++|||..++|+
T Consensus 592 Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 592 IEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred ccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 2333221 234999999999999999999999998
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=302.84 Aligned_cols=243 Identities=18% Similarity=0.269 Sum_probs=203.8
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..|+.++.||.|+||.||+|.. .++..||+|.+..... .....+.+|+.+++++.||||+++++++..++..++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 4577889999999999999995 4689999999875432 2356788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
++|++|.+++. .+++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~-ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06640 84 LGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEK-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence 99999999885 356889999999999999999999999 999999999999999999999999998765432 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...++..|+|||.+.+...+.++|+|||||++|+|+||..|+............ ........+..++..+.+++.
T Consensus 160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06640 160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-----PKNNPPTLTGEFSKPFKEFID 234 (277)
T ss_pred cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh-----hcCCCCCCchhhhHHHHHHHH
Confidence 335678899999998888999999999999999999999887654322111111 111122344567789999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.+|++||++.++++
T Consensus 235 ~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 235 ACLNKDPSFRPTAKELLK 252 (277)
T ss_pred HHcccCcccCcCHHHHHh
Confidence 999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=299.64 Aligned_cols=247 Identities=17% Similarity=0.213 Sum_probs=188.2
Q ss_pred cccCCCCCCeEEEEEEcCC---cEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 32 SEHGEKAPNVVYKGKLENQ---RRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
++||+|+||.||++...++ ..+++|.++.... ...+.+.+|+.+++.++||||+++++.+......++||||++++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3689999999999974333 3466777654432 23568999999999999999999999999988999999999999
Q ss_pred CHHhhhhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC------CCC
Q 012608 108 TLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR------DGK 179 (460)
Q Consensus 108 sL~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~------~~~ 179 (460)
+|.+++.... ....++..+..++.||+.||+|||+.+ ++||||||+|||++.++.++|+|||++.... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~-i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 159 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN-FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETED 159 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC-eeccCCccceEEEcCCccEEecccccccccCcchhhhccc
Confidence 9999986432 234667788899999999999999999 9999999999999999999999999875422 123
Q ss_pred CccCCCcccCcccccc-------CCCCCCCceehHHHHHHHHhhC-CCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 180 SYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~-------~~~~~~sDi~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
...++..|+|||++.. ..++.++||||||+++|+|+++ ..|+.........................+...+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (268)
T cd05086 160 DKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYS 239 (268)
T ss_pred CCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCc
Confidence 4467889999998743 2357899999999999999975 4455433222111111111111111223334567
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
+.+.+++..|| .+|++||+++++++.|.
T Consensus 240 ~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 240 ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 88999999999 67999999999998774
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=308.82 Aligned_cols=249 Identities=19% Similarity=0.271 Sum_probs=202.3
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.....||.|+||.||++.. .++..||||.+........+.+.+|+.+++.++||||+++++.+..++..++||||++|
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 33456789999999999984 46899999998765544566789999999999999999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~~~ 182 (460)
++|.+++. .+.+++..+..++.||+.||.|||+++ ++||||||+||++++++.++|+|||++...... ....
T Consensus 104 ~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 179 (292)
T cd06658 104 GALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQG-VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLV 179 (292)
T ss_pred CcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceee
Confidence 99999874 356899999999999999999999999 999999999999999999999999988654322 2346
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
++..|+|||.+.+..++.++||||||+++|+|++|..||................. ... ......+..+..++.+||
T Consensus 180 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~~l 256 (292)
T cd06658 180 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP-PRV--KDSHKVSSVLRGFLDLML 256 (292)
T ss_pred cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-Ccc--ccccccCHHHHHHHHHHc
Confidence 78899999999888899999999999999999999998865432211111111111 110 112245678999999999
Q ss_pred ccCCCCCCChhHHHHHhcccccc
Q 012608 263 QYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 263 ~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
..+|.+|||+.++++ .++...
T Consensus 257 ~~~P~~Rpt~~~il~--~~~~~~ 277 (292)
T cd06658 257 VREPSQRATAQELLQ--HPFLKL 277 (292)
T ss_pred cCChhHCcCHHHHhh--Chhhhc
Confidence 999999999999998 444443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=300.85 Aligned_cols=245 Identities=18% Similarity=0.229 Sum_probs=201.9
Q ss_pred ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC------HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
+|.+.+.||.|+||.||+|...+|+.+|+|.++...... ...+.+|++++++++|+||+++++++...+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 367788999999999999998789999999986543221 24688999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC---
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 177 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~--- 177 (460)
+||++|++|.+++.. ..++++..+..++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 81 MEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNC-VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 999999999999863 356889999999999999999999999 99999999999999999999999998765321
Q ss_pred -------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 178 -------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 178 -------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
.....++..|+|||.+.+..++.++|+||||+++++|++|..||............. .........+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 234 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIG---AHRGLMPRLPDSF 234 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhh---hccCCCCCCCCCC
Confidence 123457889999999988888999999999999999999999886432111110000 0001122345567
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.++.+++.+||+.+|.+||++.+++.
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 789999999999999999999999986
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=303.39 Aligned_cols=252 Identities=17% Similarity=0.241 Sum_probs=202.3
Q ss_pred HHHHhcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 18 LKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 18 ~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
+..+++++.... .||+|+||.||+|. ..++..|++|.+........+.+.+|+.++++++|+||+++++++..++.
T Consensus 3 ~~~~~~~~~~~~---~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (268)
T cd06624 3 YEYEYDENGERV---VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGF 79 (268)
T ss_pred cccccccCCceE---EEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCE
Confidence 445667776664 45999999999999 45688999999877655556789999999999999999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-CCCeEEccCCCcc
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPM--KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMK 173 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~--~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~DFg~a~ 173 (460)
.++|+||++|++|.+++... ...+ ++..+..++.|++.||.|||+++ |+||||||+||+++. ++.++|+|||++.
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 80 FKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 99999999999999998642 2344 78888999999999999999999 999999999999976 6789999999887
Q ss_pred cCCCC----CCccCCCcccCccccccCC--CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 174 NSRDG----KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 174 ~~~~~----~~~~~t~~y~aPE~~~~~~--~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
..... ....++..|+|||.+.... ++.++|+||||+++|+|++|..|+............ .........++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~ 234 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK---VGMFKIHPEIP 234 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh---hhhhccCCCCC
Confidence 54322 2345788999999986543 788999999999999999999887542211100000 00001122345
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+++++.+++.+||+.+|.+|||+.+++.
T Consensus 235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred cccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 567789999999999999999999999987
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=299.27 Aligned_cols=245 Identities=16% Similarity=0.219 Sum_probs=204.9
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|++++.||.|+||.||.+. ..+|+.|++|.+...... ..+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 37788999999999999999 456899999998754322 345789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
++|++|.+.+.......+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 99999999887544456889999999999999999999999 999999999999999999999999998765443 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...+++.|+|||.+.+...+.++|+|||||++++|++|..|+................ ....+...+.++.+++.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 234 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-----YPPVSSHYSYDLRNLVS 234 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-----CCCCcccCCHHHHHHHH
Confidence 3457888999999988888999999999999999999998886543322221111111 11234456789999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.+|.+||++.++++
T Consensus 235 ~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 235 QLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHhhCChhhCcCHHHHhh
Confidence 999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=305.77 Aligned_cols=249 Identities=20% Similarity=0.255 Sum_probs=197.4
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|++++.||+|++|.||+|.. .+|..||+|+++..... ....+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477889999999999999995 46999999998654322 246788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 104 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
++ ++|.+++.... +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR-VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY 158 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence 98 68888775433 357899999999999999999999999 999999999999999999999999998755432
Q ss_pred CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc--------------ccc-----
Q 012608 179 KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------MLT----- 238 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------------~~~----- 238 (460)
....+++.|+|||.+.+. .++.++|||||||++++|+||+.||.............. ...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence 223457889999988654 468899999999999999999988865422110000000 000
Q ss_pred ----cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 ----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 ----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...........+++++.++|.+||..||.+|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000001112346788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=302.27 Aligned_cols=252 Identities=19% Similarity=0.255 Sum_probs=205.7
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCc----EEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQR----RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.++++++.||+|+||.||+|... +|+ .+|+|.+...... ....+.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 45788899999999999999843 343 5899988765432 24678899999999999999999999876 78899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~ 179 (460)
||||+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 86 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 99999999999998642 346899999999999999999999999 9999999999999999999999999987654332
Q ss_pred C------ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 180 S------YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 180 ~------~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
. ..++..|+|||.+....++.++|+||||++++++++ |..||.......+........ ....+..++.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 238 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-----RLPQPPICTI 238 (279)
T ss_pred cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC-----CCCCCCCCCH
Confidence 1 112567999999988889999999999999999999 998886654433322221111 1122334567
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.+..++.+||..+|..||++.++++.|..+.+.
T Consensus 239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 239 DVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999987553
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=315.43 Aligned_cols=236 Identities=19% Similarity=0.185 Sum_probs=188.7
Q ss_pred cCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcC---CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 34 HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL---RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 34 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
||+|+||+||+|.. .+|+.||||++..... .....+..|..++..+ +||||+.+++++..++..++||||++|
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999994 5699999999864321 1233455677777665 699999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCcc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSYS 182 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~~ 182 (460)
++|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.++|+|||++..... .....
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qil~al~~LH~~~-ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQK--EGRFSEDRAKFYIAELVLALEHLHKYD-IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 999988863 467899999999999999999999999 99999999999999999999999999875322 23456
Q ss_pred CCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012608 183 TNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261 (460)
Q Consensus 183 ~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (460)
||..|+|||.+.+. .++.++|||||||++|+|++|..||................. . .....+++++.+++.+|
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--~---~~~~~~~~~~~~li~~~ 232 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV--R---FPKNVLSDEGRQFVKGL 232 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC--C---CCCccCCHHHHHHHHHH
Confidence 89999999998764 478999999999999999999999876543332222111100 0 01123568899999999
Q ss_pred cccCCCCCCC----hhHHHH
Q 012608 262 LQYEPRERPN----PKSLVT 277 (460)
Q Consensus 262 l~~~p~~Rps----~~~il~ 277 (460)
|..||.+||+ +.++++
T Consensus 233 L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 233 LNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred cCCCHHHCCCCCCCHHHHhc
Confidence 9999999984 555554
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=297.80 Aligned_cols=245 Identities=18% Similarity=0.214 Sum_probs=203.9
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|++++.||.|+||.||++.. .+++.+|+|.+...... ....+.+|++++++++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477889999999999999984 56899999998654322 256789999999999999999999999989999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-CCeEEccCCCcccCCCC---C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG---K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~DFg~a~~~~~~---~ 179 (460)
++|++|.+++.......+++..+..++.|++.+|.|||+++ ++|+||+|+||+++.+ +.++|+|||++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL-ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 99999999997644556899999999999999999999999 9999999999999855 45799999998765533 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...++..|+|||.+.+...+.++||||||+++++|++|+.||................ ....+...+.++.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~ 234 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGT-----FAPISDRYSPDLRQLIL 234 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcC-----CCCCCCCcCHHHHHHHH
Confidence 3467889999999988888999999999999999999998886543322222111111 11234456789999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||..+|.+|||+.++++
T Consensus 235 ~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 235 SMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHccCChhhCCCHHHHhh
Confidence 999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=303.60 Aligned_cols=242 Identities=18% Similarity=0.291 Sum_probs=201.1
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.|++++.||.|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 467788899999999999984 45889999998754322 2457899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----~ 180 (460)
+|++|.+++. .+.+++..+..++.|++.|+.|||+++ ++|+||+|+||++++++.++|+|||++....... .
T Consensus 85 ~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~-ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06642 85 GGGSALDLLK---PGPLEETYIATILREILKGLDYLHSER-KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC-eeccCCChheEEEeCCCCEEEccccccccccCcchhhhc
Confidence 9999999884 457899999999999999999999999 9999999999999999999999999987654322 3
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..++..|+|||.+.+..++.++|+|||||++++|++|..|+........... ... ..........+.++.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06642 161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL----IPK-NSPPTLEGQYSKPFKEFVEA 235 (277)
T ss_pred ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh----hhc-CCCCCCCcccCHHHHHHHHH
Confidence 3578889999999888899999999999999999999988754322111111 111 11122334567889999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
||+.+|.+|||+.++++
T Consensus 236 ~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 236 CLNKDPRFRPTAKELLK 252 (277)
T ss_pred HccCCcccCcCHHHHHH
Confidence 99999999999999998
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=304.19 Aligned_cols=258 Identities=14% Similarity=0.217 Sum_probs=205.0
Q ss_pred cccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceee
Q 012608 11 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLL 88 (460)
Q Consensus 11 ~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 88 (460)
.+.++.++....+ .|++.+.+|.|+||.||+|.. .+++.+|+|++.... .....+..|+.+++++ +||||++++
T Consensus 4 ~~~~~~~~~~~~~---~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~ 79 (282)
T cd06636 4 DDIDLSALRDPAG---IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYY 79 (282)
T ss_pred hhhhhhhhcChhh---hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 3456666655554 566778889999999999995 568999999986543 2345788999999999 799999999
Q ss_pred eEEee------CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC
Q 012608 89 GCCCE------GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 162 (460)
Q Consensus 89 ~~~~~------~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~ 162 (460)
+++.. .+..+++|||+++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++
T Consensus 80 ~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-ivH~dl~~~nili~~~~ 158 (282)
T cd06636 80 GAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK-VIHRDIKGQNVLLTENA 158 (282)
T ss_pred eehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCC
Confidence 99853 457899999999999999987655567889999999999999999999999 99999999999999999
Q ss_pred CeEEccCCCcccCCC----CCCccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc
Q 012608 163 NPRLSTFGLMKNSRD----GKSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 233 (460)
Q Consensus 163 ~~kl~DFg~a~~~~~----~~~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~ 233 (460)
.++|+|||++..... .....++..|+|||.+. ...++.++|+|||||++|+|++|..||..........
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-- 236 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-- 236 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh--
Confidence 999999999875432 23456788999999875 3457889999999999999999998885432211111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..............++.++.++|.+||+.||.+|||+.++++
T Consensus 237 --~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 --LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred --hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 011111111223356789999999999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=301.38 Aligned_cols=250 Identities=20% Similarity=0.305 Sum_probs=202.4
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
+++++++.||.|+||.||+|+.. +.+.|++|.+...... ....+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56788999999999999999853 2467999988654433 2467999999999999999999999999888999
Q ss_pred EEEEcCCCCCHHhhhhccCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 99 LVAEYMPNETLAKHLFHWET-------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
+||||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++++|||+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR-FVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC-cccCcCccceEEEeCCCcEEEccccc
Confidence 99999999999999875331 26899999999999999999999999 99999999999999999999999998
Q ss_pred cccCCCC-----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCC
Q 012608 172 MKNSRDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245 (460)
Q Consensus 172 a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (460)
+...... ....++..|+|||.+.+...+.++||||||+++++|++ |..||.............. ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~----~~~~~~ 239 (275)
T cd05046 164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA----GKLELP 239 (275)
T ss_pred ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc----CCcCCC
Confidence 7643221 22345677999999988888999999999999999999 6666644322221111111 111112
Q ss_pred CCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
.+..++..+.+++.+||+.+|.+|||+.++++.|.
T Consensus 240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 34456789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=301.61 Aligned_cols=253 Identities=23% Similarity=0.272 Sum_probs=204.1
Q ss_pred CcccchhcccCCCCCCeEEEEEEcC----CcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
..++.+.+.||.|+||.||+|...+ ...|+||....... ...+.+.+|+.++++++||||+++++++.. +..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3457788999999999999998533 34689998865542 235679999999999999999999998865 56789
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~ 179 (460)
||||+++++|.+++... ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 84 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 84 VMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKR-FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 99999999999998642 335899999999999999999999999 9999999999999999999999999987544332
Q ss_pred -----CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 180 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 180 -----~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
...++..|+|||.+....++.++||||||++++++++ |..||................ ....+..++..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (270)
T cd05056 162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE-----RLPMPPNCPPT 236 (270)
T ss_pred ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-----cCCCCCCCCHH
Confidence 2223467999999988889999999999999999986 998886553322221111110 11234566789
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+.+++.+||..+|.+|||+.++++.|+.+..+
T Consensus 237 ~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 237 LYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=301.13 Aligned_cols=248 Identities=19% Similarity=0.239 Sum_probs=199.8
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC--C--------HHHHHHHHHHHhcCCCCccceeeeEEeeCC
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--D--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~--------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 95 (460)
.|.+.+.||.|+||.||+|. ..+|+.||+|.++..... . .+.+..|+.++++++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 36677889999999999998 456899999988542111 0 245788999999999999999999999999
Q ss_pred eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
..++||||++|++|.+++.. .+.+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKG-ILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-eeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 99999999999999999864 367899999999999999999999999 999999999999999999999999998764
Q ss_pred CCC------CCccCCCcccCccccccCC--CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 176 RDG------KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 176 ~~~------~~~~~t~~y~aPE~~~~~~--~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
... ....++..|+|||.+.... ++.++|+||||++++++++|..|+..........................
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVS 238 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCcccc
Confidence 422 2345788999999987654 78899999999999999999988754322111111111111112222333
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..++..+.+++.+||..+|.+|||+.++++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 239 MNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 456789999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=297.82 Aligned_cols=245 Identities=28% Similarity=0.419 Sum_probs=201.1
Q ss_pred chhcccCCCCCCeEEEEEEcC-C----cEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 29 NIVSEHGEKAPNVVYKGKLEN-Q----RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
++++.||.|+||.||++.... + ..||+|.++..... ....+..|+.+++.++|+||+++++++...+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 467889999999999999543 4 88999999766543 46789999999999999999999999999899999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC---
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~--- 179 (460)
|++|++|.+++.......+++..+..++.|++.||.+||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN-FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC-eeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 999999999986533333899999999999999999999999 9999999999999999999999999987655431
Q ss_pred --CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 180 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 180 --~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
...++..|+|||.+.+..++.++||||||+++++|++ |..|+................ ....+...+.++.+
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-----RLPKPENCPPEIYK 235 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-----CCCCCCcCCHHHHH
Confidence 1225688999999987889999999999999999998 666665433222222111111 11223446789999
Q ss_pred HHHHHcccCCCCCCChhHHHHHh
Q 012608 257 LASRCLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~~L 279 (460)
++.+||..+|++|||+.++++.|
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHhhC
Confidence 99999999999999999998864
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=297.74 Aligned_cols=245 Identities=18% Similarity=0.230 Sum_probs=203.6
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.+|++.+.||.|+||.||++... +++.+++|.+..... .+.+.+|++++++++||||+++++++..+...++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 35788889999999999999965 489999999865432 678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----~ 180 (460)
++++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 81 ~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (256)
T cd06612 81 GAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNK-KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT 158 (256)
T ss_pred CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence 99999998854 3457899999999999999999999999 9999999999999999999999999987654332 3
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..++..|+|||.+.+..++.++||||||+++++|++|+.|+.............. ........+...+..+.+++.+
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd06612 159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPPPTLSDPEKWSPEFNDFVKK 235 (256)
T ss_pred ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCCCCCCchhhcCHHHHHHHHH
Confidence 4578899999999888899999999999999999999988764322111111000 0111112234566789999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
||+.+|++|||+.++++
T Consensus 236 ~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 236 CLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHhcChhhCcCHHHHhc
Confidence 99999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=305.81 Aligned_cols=251 Identities=20% Similarity=0.292 Sum_probs=200.4
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCc----EEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
++++++.||+|+||.||+|.. .+|. .||+|.+....... ...+.+|+.++++++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~v 86 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLV 86 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-CCceee
Confidence 467788999999999999984 4454 57899886544322 3468899999999999999999999865 456799
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~- 179 (460)
+||+++|+|.+++.. ....+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||+++......
T Consensus 87 ~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 164 (303)
T cd05110 87 TQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERR-LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 164 (303)
T ss_pred ehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcC-eeccccccceeeecCCCceEEccccccccccCccc
Confidence 999999999998864 2346889999999999999999999999 9999999999999999999999999987654321
Q ss_pred -----CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 180 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 180 -----~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
...++..|++||.+.+..++.++||||||+++|+|++ |+.||................ ....+..++..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 239 (303)
T cd05110 165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-----RLPQPPICTID 239 (303)
T ss_pred ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-----CCCCCCCCCHH
Confidence 2234678999999988889999999999999999997 888876543222211111110 01122345678
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+..++..||..+|.+||++.++++.|..+...
T Consensus 240 ~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 240 VYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=304.34 Aligned_cols=242 Identities=20% Similarity=0.252 Sum_probs=203.2
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||.|+||.||++.. .+++.||+|+++.... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 578889999999999999995 4689999999865432 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-CCc
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 181 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~~ 181 (460)
|++|++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~-i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLD-IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999864 467899999999999999999999999 999999999999999999999999998765443 344
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (460)
.+++.|+|||.+.+...+.++||||||+++|+|++|..||............... ...++...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG------KVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CccCCccCCHHHHHHHHHH
Confidence 6788999999998888899999999999999999999988654432222211111 1124455678999999999
Q ss_pred cccCCCCCC-----ChhHHHH
Q 012608 262 LQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 262 l~~~p~~Rp-----s~~~il~ 277 (460)
|+.+|.+|+ +++++++
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ccCCHHHccCcccCCHHHHHc
Confidence 999999998 6677765
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=303.69 Aligned_cols=244 Identities=19% Similarity=0.262 Sum_probs=201.4
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.+...+.||.|++|.||++.. .+++.+++|+++.......+.+.+|+.+++.++||||+++++++..++..++++||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 444456789999999999984 5689999999876554456678999999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CCc
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 181 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~~ 181 (460)
|++|.+++.. ..+++..+..++.|++.||+|||+.+ ++||||+|+||+++.++.++|+|||++...... ...
T Consensus 100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 175 (285)
T cd06648 100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG-VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSL 175 (285)
T ss_pred CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccc
Confidence 9999998853 56899999999999999999999999 999999999999999999999999987654322 234
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (460)
.++..|+|||.+.+..++.++||||||+++++|++|..||................ ......+..++..+.+++.+|
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~~ 252 (285)
T cd06648 176 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL---PPKLKNLHKVSPRLRSFLDRM 252 (285)
T ss_pred cCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC---CCCCcccccCCHHHHHHHHHH
Confidence 57889999999988889999999999999999999999886543222211111111 011112233668999999999
Q ss_pred cccCCCCCCChhHHHH
Q 012608 262 LQYEPRERPNPKSLVT 277 (460)
Q Consensus 262 l~~~p~~Rps~~~il~ 277 (460)
|+.+|++|||+.++++
T Consensus 253 l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 253 LVRDPAQRATAAELLN 268 (285)
T ss_pred cccChhhCcCHHHHcc
Confidence 9999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=306.02 Aligned_cols=242 Identities=19% Similarity=0.250 Sum_probs=200.8
Q ss_pred chhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 29 NIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
.....||.|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++++||++++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 3455789999999999984 468999999987655555678899999999999999999999999999999999999999
Q ss_pred CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CCccC
Q 012608 108 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYST 183 (460)
Q Consensus 108 sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~~~~ 183 (460)
+|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....+
T Consensus 104 ~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~ 179 (297)
T cd06659 104 ALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQG-VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG 179 (297)
T ss_pred CHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceec
Confidence 9999874 356899999999999999999999999 999999999999999999999999988654322 34567
Q ss_pred CCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcc
Q 012608 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263 (460)
Q Consensus 184 t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 263 (460)
+..|+|||.+.+..++.++|||||||++++|++|+.||.............. . ...........+..+.+++.+||+
T Consensus 180 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l~~~i~~~l~ 256 (297)
T cd06659 180 TPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD-S--PPPKLKNAHKISPVLRDFLERMLT 256 (297)
T ss_pred CccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-c--CCCCccccCCCCHHHHHHHHHHhc
Confidence 8999999999888899999999999999999999998864432211111100 0 011112233566789999999999
Q ss_pred cCCCCCCChhHHHH
Q 012608 264 YEPRERPNPKSLVT 277 (460)
Q Consensus 264 ~~p~~Rps~~~il~ 277 (460)
.+|.+||++.++++
T Consensus 257 ~~P~~Rps~~~ll~ 270 (297)
T cd06659 257 REPQERATAQELLD 270 (297)
T ss_pred CCcccCcCHHHHhh
Confidence 99999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=316.68 Aligned_cols=242 Identities=16% Similarity=0.206 Sum_probs=195.0
Q ss_pred ccchhcccCCCCCCeEEEEEEc---CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++++.||.|+||.||++... .++.|++|.+... ....+|+.++++++||||+++++++...+..+++||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 5899999999999999999742 3678999987543 3456899999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----- 178 (460)
+. ++|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.++|+|||++......
T Consensus 168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~g-ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRG-IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 96 68888874 4567999999999999999999999999 999999999999999999999999998755432
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh----hhh----cc-----cc---------
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL----IRD----RN-----LQ--------- 235 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~----~~~----~~-----~~--------- 235 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..... +.. .. ..
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 23568999999999998889999999999999999999999986532110 000 00 00
Q ss_pred ---cc----cccc-ccC-CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 ---ML----TDSC-LEG-QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ---~~----~~~~-~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.. ..+. ... ......+.++..+|.+||+.||++|||+.+++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 0000 000 001234567899999999999999999999998
|
|
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=302.98 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=198.6
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++++.||.|++|.||++... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 5788899999999999999954 6899999998654322 245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
+++++|..+.. ....+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHN-CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 99988887765 3456899999999999999999999999 9999999999999999999999999987654432
Q ss_pred CccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc---c-----------------ccccc
Q 012608 180 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR---N-----------------LQMLT 238 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~---~-----------------~~~~~ 238 (460)
...++..|+|||.+.+ ..++.++||||||+++++|++|..||.+......... . .....
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456789999999876 4478899999999999999999988865422110000 0 00000
Q ss_pred cccccC-----CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 DSCLEG-----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 ~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+.... ...+..+..+.+++.+||+.+|++|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000 011245678999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=306.48 Aligned_cols=249 Identities=18% Similarity=0.155 Sum_probs=202.0
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+|++++.||+|+||.||++.. .+++.|++|.+..... .....+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 577889999999999999995 4588999999876532 224578899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 177 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----- 177 (460)
|++|++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999999999864 456899999999999999999999999 99999999999999999999999998763110
Q ss_pred --------------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccccccc
Q 012608 178 --------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 178 --------------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
.....++..|+|||.+.+..++.++|+|||||++|+|++|..||.+............... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~---~~ 235 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI---EW 235 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc---CC
Confidence 0123467889999999888899999999999999999999999876544332222211110 00
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcc
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~ 281 (460)
.......+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11122467889999999999999999997666665544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=307.56 Aligned_cols=247 Identities=25% Similarity=0.383 Sum_probs=199.6
Q ss_pred cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCH--HHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
|++++.||+|+||+||++... +++.||+|++........ ....+|+.++++++||||+++++++...+..++|||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 678899999999999999954 577999999987653332 23456999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC----CCCCC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGKS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~----~~~~~ 180 (460)
++++|.+++. ....+++..+..++.|++.||.+||+++ ++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~-i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKG-IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTT-EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--cccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 9889999996 3567899999999999999999999999 999999999999999999999999998642 22245
Q ss_pred ccCCCcccCccccc-cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc-cccccCCCCchhHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 181 ~~~t~~y~aPE~~~-~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li 258 (460)
..++..|+|||.+. +...+.++||||||+++++|++|..|+................. ............++.+.+++
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 237 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLI 237 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHH
Confidence 56789999999998 77899999999999999999999988876511111110000000 00000111112237999999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||+.||++|||+.++++
T Consensus 238 ~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 238 KKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHSSSSGGGSTTHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999986
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=298.36 Aligned_cols=245 Identities=25% Similarity=0.308 Sum_probs=191.7
Q ss_pred cccCCCCCCeEEEEEEc----CCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEe-eCCeeEEEEEcCC
Q 012608 32 SEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCC-EGDERLLVAEYMP 105 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~ 105 (460)
+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|+.+++.++||||+++++++. .++..+++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 35799999999999842 245799998854322 23567889999999999999999999775 4556889999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-------
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------- 178 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------- 178 (460)
+++|.+++... ....++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 158 (262)
T cd05058 81 HGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKK-FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN 158 (262)
T ss_pred CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence 99999998642 345677888899999999999999999 999999999999999999999999998754321
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCC-CCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....++..|+|||.+.+..++.++|||||||++|||++|..| +............... .....+...+..+.+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 233 (262)
T cd05058 159 HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-----RRLLQPEYCPDPLYE 233 (262)
T ss_pred cccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHH
Confidence 122346789999999888899999999999999999996544 4332221111111110 011122345678999
Q ss_pred HHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 257 LASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
++.+||..+|++||++.++++.|+.+.
T Consensus 234 li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 234 VMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=315.61 Aligned_cols=243 Identities=19% Similarity=0.268 Sum_probs=205.4
Q ss_pred chhcccCCCCCCeEEEEEEc--CCc--EEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 29 NIVSEHGEKAPNVVYKGKLE--NQR--RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.+.+.||+|.||+|++|.|. +|+ .||||+++..... ....|++|+.+|.+|+|||++++||++.. ....||||+
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 45688999999999999864 344 5899999877655 46789999999999999999999999876 778999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCcc-
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS- 182 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~- 182 (460)
++.|||.+.+++.....+.......++.||+.|+.||.+++ +|||||...|+|+-....+||||||+.+..+....+.
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr-lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv 270 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR-LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV 270 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh-hhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence 99999999998756677889999999999999999999999 9999999999999999999999999999877654432
Q ss_pred ------CCCcccCccccccCCCCCCCceehHHHHHHHHhhCC-CCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 183 ------TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 183 ------~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
-...|+|||.+....++.+||||+|||+||||+|+. .||.+.....+.... +....-.-++.++.+++
T Consensus 271 m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~i-----D~~erLpRPk~csedIY 345 (1039)
T KOG0199|consen 271 MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNI-----DAGERLPRPKYCSEDIY 345 (1039)
T ss_pred ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhc-----cccccCCCCCCChHHHH
Confidence 246899999999999999999999999999999954 677665433332221 12222245678999999
Q ss_pred HHHHHHcccCCCCCCChhHHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~~ 278 (460)
+++..||..+|.+|||+..|.+.
T Consensus 346 ~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 346 QIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred HHHHHhccCCccccccHHHHHHh
Confidence 99999999999999999999743
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=306.27 Aligned_cols=243 Identities=16% Similarity=0.243 Sum_probs=184.6
Q ss_pred hcccCCCCCCeEEEEEEc---CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee--CCeeEEEEEcCC
Q 012608 31 VSEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVAEYMP 105 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~ 105 (460)
..+||+|+||+||+|... +++.||+|.+.... ....+.+|+.++++++||||+++++++.. +...+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 367999999999999853 46889999986543 23567899999999999999999998854 456889999996
Q ss_pred CCCHHhhhhcc-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE----cCCCCeEEccCCCccc
Q 012608 106 NETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKN 174 (460)
Q Consensus 106 g~sL~~~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~DFg~a~~ 174 (460)
++|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 6887776432 1235889999999999999999999999 9999999999999 4567899999999876
Q ss_pred CCCC-------CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh---------hcc----
Q 012608 175 SRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---------DRN---- 233 (460)
Q Consensus 175 ~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~---------~~~---- 233 (460)
.... ....+|+.|+|||++.+. .++.++||||+||++|+|++|+.||......... ...
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 5432 245678999999998764 4789999999999999999999888532211000 000
Q ss_pred ----------ccccc----------cccc--------cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 ----------LQMLT----------DSCL--------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 ----------~~~~~----------~~~~--------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..... .... ........+..+.+++.+||+.||.+|||++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000 0000 00001112356889999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=299.98 Aligned_cols=242 Identities=23% Similarity=0.352 Sum_probs=196.2
Q ss_pred ccCCCCCCeEEEEEEcC-------CcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 33 EHGEKAPNVVYKGKLEN-------QRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.||.|+||.||+|+..+ +..+++|.+..... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 57999999999998532 26799998865432 33567899999999999999999999999888999999999
Q ss_pred CCCCHHhhhhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-----CeEEccCCCccc
Q 012608 105 PNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-----NPRLSTFGLMKN 174 (460)
Q Consensus 105 ~g~sL~~~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-----~~kl~DFg~a~~ 174 (460)
+|++|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++ .++|+|||++..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC-cccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 9999999986432 234788999999999999999999999 99999999999999877 899999999875
Q ss_pred CCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 175 SRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 175 ~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
.... ....++..|+|||.+.++.++.++|||||||++|+|+| |..||.............. ......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-----~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA-----GGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc-----CCccCCc
Confidence 4322 12234678999999998889999999999999999998 8888765432222111110 1111234
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 456789999999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=302.91 Aligned_cols=248 Identities=22% Similarity=0.310 Sum_probs=199.9
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|++.+.||.|++|.||+|.. .+|+.|++|++..... .....+.+|+.++++++||||+++++++..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 478889999999999999995 5699999999876543 2356899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
+ |++|.+++... ...+++..++.++.||+.+|.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 M-PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANG-IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred c-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 9 99999988642 367999999999999999999999999 9999999999999999999999999987654432
Q ss_pred -CccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc--------------------
Q 012608 180 -SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-------------------- 237 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-------------------- 237 (460)
...++..|+|||.+.+.. ++.++||||+|+++++|++|.++|................
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 345788999999986544 6889999999999999999987665432211100000000
Q ss_pred ----ccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 ----TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 ----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..........+..+..+.+++.+||..+|.+|||+++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0000001122345688999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=310.19 Aligned_cols=247 Identities=21% Similarity=0.278 Sum_probs=216.5
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
+.+..|.+++.||+|.|+.|.+++ ..+|..||||.+.+..... ...+.+|+++|..|.|||||+++.+......+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 556678999999999999999999 4569999999998776544 3568999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||+.||.+.+++.. .+...+..+..++.|+.+|++|||+++ |||||||++|||++.+.++||+|||++..+...
T Consensus 133 V~eya~~ge~~~yl~~--~gr~~e~~ar~~F~q~vsaveYcH~k~-ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVK--HGRMKEKEARAKFRQIVSAVEYCHSKN-IVHRDLKAENILLDENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEEeccCchhHHHHHh--cccchhhhhhhhhHHHHHHHHHHhhcc-eeccccchhhcccccccceeeeccccceeecccc
Confidence 9999999999999984 556777899999999999999999999 999999999999999999999999999876643
Q ss_pred --CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
.+++|++.|.|||++.+..+ ++.+|+||+|+++|-|++|..||.+.....+......... .++-.++.++.
T Consensus 210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~------rIp~~ms~dce 283 (596)
T KOG0586|consen 210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY------RIPFYMSCDCE 283 (596)
T ss_pred cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee------cccceeechhH
Confidence 67899999999999998776 7799999999999999999999998766555444332211 34556678999
Q ss_pred HHHHHHcccCCCCCCChhHHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~~ 278 (460)
++|+++|..+|.+|++.+++.+.
T Consensus 284 ~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 284 DLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred HHHHHhhccCccccCCHHHhhhh
Confidence 99999999999999999999874
|
|
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-39 Score=297.37 Aligned_cols=253 Identities=16% Similarity=0.170 Sum_probs=200.6
Q ss_pred CHHHHHHHhcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEE
Q 012608 14 TLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCC 91 (460)
Q Consensus 14 ~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~ 91 (460)
+..++....++|...+.++ +|.|+||.||++. ..++..+|+|.+........ |+.....+ +||||+++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~ 78 (267)
T PHA03390 5 SLSELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSV 78 (267)
T ss_pred HHHHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEE
Confidence 4455555666666555554 6999999999999 45689999999865432221 22222223 799999999999
Q ss_pred eeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-CeEEccCC
Q 012608 92 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFG 170 (460)
Q Consensus 92 ~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~DFg 170 (460)
..++..++||||++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|||
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 79 TTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHN-IIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred ecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 999999999999999999999863 348999999999999999999999999 99999999999999888 99999999
Q ss_pred CcccCCCCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 171 LMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 171 ~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
++..........++..|+|||.+.+..++.++||||||+++++|++|..||.................. .....+...
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 233 (267)
T PHA03390 156 LCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ--KKLPFIKNV 233 (267)
T ss_pred cceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc--ccCCccccc
Confidence 988777666778899999999998888999999999999999999999988643222111111111111 111233467
Q ss_pred HHHHHHHHHHHcccCCCCCCC-hhHHHH
Q 012608 251 GTELVRLASRCLQYEPRERPN-PKSLVT 277 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps-~~~il~ 277 (460)
++.+.+++.+||+.+|.+||+ ++++++
T Consensus 234 ~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 234 SKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred CHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 789999999999999999995 699886
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=302.17 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=200.5
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
..|++++.||.|+||.||+|.. .+|+.||+|++....... ...+.+|+.+++.++||||+++++++..++..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 4578889999999999999995 468999999986543332 346889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCc
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~ 181 (460)
||++ ++|.+.+.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.........
T Consensus 95 e~~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~-i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~ 171 (307)
T cd06607 95 EYCL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHE-RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSF 171 (307)
T ss_pred HhhC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEECCCCCEEEeecCcceecCCCCCc
Confidence 9998 677776643 2456899999999999999999999999 999999999999999999999999998877666677
Q ss_pred cCCCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 182 STNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 182 ~~t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
.++..|+|||.+. ...++.++||||||+++|+|+||..|+............... ......+...+..+.+++
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li 247 (307)
T cd06607 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----DSPTLSSNDWSDYFRNFV 247 (307)
T ss_pred cCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC----CCCCCCchhhCHHHHHHH
Confidence 7889999999874 355788999999999999999999887653322111111000 011111234567899999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||..+|++||++.+++.
T Consensus 248 ~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 248 DSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred HHHhcCChhhCcCHHHHhc
Confidence 9999999999999999987
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=302.90 Aligned_cols=248 Identities=20% Similarity=0.253 Sum_probs=205.0
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+....|.+++.||.|+||.||++.. .+++.|++|.+........+.+.+|+.++++++||||+++++++..++..++|+
T Consensus 16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred CchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 3346788899999999999999984 568999999987655555678899999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++|++|.+++. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~g-i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~ 171 (293)
T cd06647 96 EYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (293)
T ss_pred ecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCC-EeeccCCHHHEEEcCCCCEEEccCcceecccccccc
Confidence 9999999999885 346889999999999999999999999 999999999999999999999999987654432
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....+++.|++||.+.+..++.++|+||||+++|++++|..||............ ..........+...+..+.++
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l 248 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI---ATNGTPELQNPEKLSAIFRDF 248 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh---hcCCCCCCCCccccCHHHHHH
Confidence 2345778899999998888899999999999999999999988654321111000 001111111233456789999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
+.+||..+|++||++.+++.
T Consensus 249 i~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 249 LNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 99999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=299.32 Aligned_cols=246 Identities=19% Similarity=0.294 Sum_probs=200.8
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC------CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
|++.+.||.|++|.||++. ..+++.||+|++...... ..+.+.+|+.++++++||||+++++++...+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 5667888999999999998 467999999998754321 135788999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-CeEEccCCCcccCCCC-
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~DFg~a~~~~~~- 178 (460)
+||++|++|.+++.. .+++++..+..++.|++.||.|||+++ ++|+||+|+||+++.++ .++|+|||.+......
T Consensus 82 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~-i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 82 VEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQ-IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 999999999999863 457889999999999999999999999 99999999999998776 5999999998755432
Q ss_pred -------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 179 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 179 -------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
....++..|+|||.+.+..++.++|+||+|+++++|++|..||........... .............+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL-IFKIASATTAPSIPEHLS 237 (268)
T ss_pred ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHH-HHHHhccCCCCCCchhhC
Confidence 234568899999999888889999999999999999999988754321111110 001111112234555677
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+++.+||..+|.+|||+.++++
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 89999999999999999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-39 Score=297.72 Aligned_cols=243 Identities=18% Similarity=0.185 Sum_probs=196.7
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-----CHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 98 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 98 (460)
+|++.+.||+|+||.||.+.. .+|+.||||.+...... ..+.+.+|+.++++++||||+++++++... ..++
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 567788999999999999994 56999999988643211 135788899999999999999999988653 4678
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 177 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~- 177 (460)
++|||++|++|.+++.. ...+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 83 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 83 IFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNM-IVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 99999999999998863 346888999999999999999999999 99999999999999999999999998875432
Q ss_pred ------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 178 ------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 178 ------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
.....++..|+|||.+.+..++.++|||||||++|+|++|+.||............. ........+...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 235 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA----TQPTNPVLPPHVS 235 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh----cCCCCCCCchhhC
Confidence 223457889999999988889999999999999999999999886432211111111 1111223455667
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+..++.+||. +|++||+++++++
T Consensus 236 ~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 236 DHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 789999999995 9999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=309.45 Aligned_cols=242 Identities=12% Similarity=0.148 Sum_probs=190.1
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.|++++.||+|+||.||+|... +++.||+|+.... ....|+.++++++||||+++++++..++..++|||++.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 5889999999999999999954 5789999975332 23569999999999999999999999999999999996
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CCcc
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 182 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~~~ 182 (460)
++|.+++.. ....+++..+..|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....
T Consensus 141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQR-IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 688887754 3467899999999999999999999999 999999999999999999999999998753322 3456
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh----hhh------hcccc--cccccccc-------
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD----LIR------DRNLQ--MLTDSCLE------- 243 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~----~~~------~~~~~--~~~~~~~~------- 243 (460)
||..|+|||++.+..++.++|||||||++|||+++..++...... ... ..... ........
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL 297 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence 899999999999888999999999999999999976554221000 000 00000 00000000
Q ss_pred ---------------C----CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 244 ---------------G----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 244 ---------------~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. ......+.++..+|.+||+.||.+|||+.++++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 0 001134556778999999999999999999987
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=303.47 Aligned_cols=248 Identities=19% Similarity=0.231 Sum_probs=195.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++++.||.|+||.||+|.. .+|+.||+|.++..... ....+.+|+.++++++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 367888999999999999995 46999999998654322 235678899999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
++ ++|.+++.. ..+.+++..++.++.||+.||.|||+++ ++|+||||+||+++.++.++|+|||++...... .
T Consensus 81 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 81 CD-QDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHN-VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred CC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcC
Confidence 97 578777654 2456899999999999999999999999 999999999999999999999999998765432 2
Q ss_pred CccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCCh-hhhhhhhcc--------------cccccccccc
Q 012608 180 SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRN--------------LQMLTDSCLE 243 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~-~~~~~~~~~--------------~~~~~~~~~~ 243 (460)
...++..|+|||.+.+.. ++.++|||||||++|+|+||..|+... ......... ..........
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 335678999999987654 688999999999999999999875322 111100000 0000000000
Q ss_pred ---------CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 244 ---------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 244 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
....+.+++++.+++.+||+.||.+|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 1122346788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=299.72 Aligned_cols=244 Identities=19% Similarity=0.281 Sum_probs=202.0
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
+|++.+.||.|++|.||++... +++.|++|.+...... ....+.+|++++++++||||+++++.+..++..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5678889999999999999954 6899999998765432 3467899999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--CCc
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSY 181 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--~~~ 181 (460)
+|++|.+++.... ..+++..+..++.|++.+|.|||+ .+ ++|+||||+||++++++.++|+|||.+...... ...
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~-i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHK-IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCC-eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence 9999999986432 678999999999999999999999 88 999999999999999999999999988654322 235
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChh-----hhhhhhccccccccccccCCCCch-hHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-----LDLIRDRNLQMLTDSCLEGQFTDD-DGTELV 255 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 255 (460)
.++..|+|||.+.+..++.++||||||+++++|++|..|+.... ........... .....+.. ++.++.
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (265)
T cd06605 160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-----PPPRLPSGKFSPDFQ 234 (265)
T ss_pred cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-----CCCCCChhhcCHHHH
Confidence 67889999999988889999999999999999999998886431 10111111110 01112222 678899
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
++|.+||..+|++|||+.+++.
T Consensus 235 ~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 235 DFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHHcCCCchhCcCHHHHhh
Confidence 9999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=297.42 Aligned_cols=242 Identities=22% Similarity=0.268 Sum_probs=203.8
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.|++.+.||.|+||.||++... +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 3678899999999999999954 699999999875432 235689999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---C
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---K 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~ 179 (460)
|++|++|.+++.. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... .
T Consensus 81 ~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 157 (258)
T cd05578 81 LLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKG-IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTT 157 (258)
T ss_pred CCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEEcCCCCEEEeecccccccCCCcccc
Confidence 9999999999864 357899999999999999999999999 999999999999999999999999988765443 3
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh---hhhhhccccccccccccCCCCchhHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
...++..|+|||.+.+...+.++|+||||+++|+|++|..|+..... ......... .....+...+..+.+
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 231 (258)
T cd05578 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------ADVLYPATWSTEAID 231 (258)
T ss_pred ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc------ccccCcccCcHHHHH
Confidence 45578899999999888889999999999999999999999875542 111111110 223445567789999
Q ss_pred HHHHHcccCCCCCCCh--hHHHH
Q 012608 257 LASRCLQYEPRERPNP--KSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~--~~il~ 277 (460)
++.+||+.+|.+||++ +++++
T Consensus 232 ~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 232 AINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HHHHHccCChhHcCCccHHHHhc
Confidence 9999999999999999 66653
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=298.69 Aligned_cols=258 Identities=14% Similarity=0.181 Sum_probs=200.3
Q ss_pred cCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeE
Q 012608 13 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGC 90 (460)
Q Consensus 13 ~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~ 90 (460)
+.++++..+++ +|++++.||+|+||.||++.. .+++.+|+|++.... .....+..|+.+++++ +||||++++++
T Consensus 8 ~~~~~~~~~~~---~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 8 IIFDSFPDPSD---TWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred EEeecCCCccc---ceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 34444444444 457788899999999999984 468999999876432 2246788999999999 79999999998
Q ss_pred Ee-----eCCeeEEEEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC
Q 012608 91 CC-----EGDERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 163 (460)
Q Consensus 91 ~~-----~~~~~~lv~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~ 163 (460)
+. .++..++||||++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK-TIHRDVKGNNILLTTEGG 162 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC-ccccCCCHHhEEECCCCC
Confidence 74 345689999999999999887532 2356889999999999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCC----CCccCCCcccCcccccc-----CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc
Q 012608 164 PRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 164 ~kl~DFg~a~~~~~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 234 (460)
++|+|||++...... ....++..|+|||.+.. ..++.++|||||||++|+|++|+.|+.............
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~ 242 (286)
T cd06638 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIP 242 (286)
T ss_pred EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcc
Confidence 999999998764432 23457899999998753 347889999999999999999998876432211111100
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
.. .......+...+..+.+++.+||+.+|++|||+.++++.
T Consensus 243 ~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 243 RN---PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cc---CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 00 001111233456789999999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=297.05 Aligned_cols=243 Identities=18% Similarity=0.221 Sum_probs=195.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-----CHHHHHHHHHHHhcCCCCccceeeeEEee--CCeeE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERL 98 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 98 (460)
+|++.+.||+|+||.||++.. .+|+.|++|++...... ....+.+|+.++++++||||+++++++.. ++..+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 466778889999999999984 56999999988644321 13468899999999999999999998865 35688
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+++||+++++|.+++.. ...+++...+.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 83 l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~-i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 83 IFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 99999999999998863 456889999999999999999999999 999999999999999999999999998754321
Q ss_pred -------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 179 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 179 -------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
....++..|+|||.+.+..++.++|||||||++|+|++|+.||............ ........++...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~----~~~~~~~~~~~~~~ 235 (266)
T cd06651 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKI----ATQPTNPQLPSHIS 235 (266)
T ss_pred cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHH----hcCCCCCCCchhcC
Confidence 2245788999999998888899999999999999999999888643221111111 11111223455566
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+..++ .||..+|++||++.+++.
T Consensus 236 ~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 236 EHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 7888888 677789999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-39 Score=320.87 Aligned_cols=247 Identities=17% Similarity=0.204 Sum_probs=188.2
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCC------CccceeeeEEeeC-Cee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN------NRLTNLLGCCCEG-DER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~-~~~ 97 (460)
.+|++++.||+|+||+||+|.. .+++.||||+++... .....+..|+++++.+.| ++++.+++++..+ +..
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 4688899999999999999994 468899999986432 123456677777777754 4588888888654 468
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCC--------------
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDG-------------- 162 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~-------------- 162 (460)
++|||++ |++|.+++.. .+.+++..+..|+.||+.||.|||++ + ||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~g-IiHrDlKP~NILl~~~~~~~~~~~~~~~~~~ 283 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELH-LMHTDLKPENILMETSDTVVDPVTNRALPPD 283 (467)
T ss_pred EEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEecCCcccccccccccCCC
Confidence 8999998 6889888863 45799999999999999999999984 8 99999999999998665
Q ss_pred --CeEEccCCCcccCCC-CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc---cccc
Q 012608 163 --NPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR---NLQM 236 (460)
Q Consensus 163 --~~kl~DFg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~---~~~~ 236 (460)
.+||+|||.+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........... ....
T Consensus 284 ~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~ 363 (467)
T PTZ00284 284 PCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGR 363 (467)
T ss_pred CceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCC
Confidence 499999998765432 3456789999999999988999999999999999999999999865432111000 0000
Q ss_pred cc----------------------cccccC---------C-C-CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 LT----------------------DSCLEG---------Q-F-TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 ~~----------------------~~~~~~---------~-~-~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+. .+.... . . .....+.+.+||.+||+.||.+|||++++++
T Consensus 364 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 364 LPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred CCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 00 000000 0 0 0012356889999999999999999999998
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=300.55 Aligned_cols=252 Identities=17% Similarity=0.248 Sum_probs=200.4
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeC--Cee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG--DER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 97 (460)
+++..|++++.||.|+||.||+|... +++.+++|.++...... ...+.+|+.++++++||||+++++++... +..
T Consensus 2 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (293)
T cd07843 2 RSVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI 81 (293)
T ss_pred cchhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence 35567899999999999999999954 68999999987544322 34677899999999999999999998877 889
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||++ ++|.+++... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~lv~e~~~-~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNW-ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred EEEehhcC-cCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99999998 5998887642 346899999999999999999999999 99999999999999999999999998876554
Q ss_pred C----CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc--------------------
Q 012608 178 G----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-------------------- 232 (460)
Q Consensus 178 ~----~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~-------------------- 232 (460)
. ....++..|+|||.+.+.. .+.++|+||||+++++|++|..||...........
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 3 2334678899999987544 68899999999999999999988764322111100
Q ss_pred -----cccccccccccCCCCch-hHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 233 -----NLQMLTDSCLEGQFTDD-DGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 233 -----~~~~~~~~~~~~~~~~~-~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.............++.. +++.+.+++.+||+.+|++|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000111111223333 5788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=301.43 Aligned_cols=250 Identities=18% Similarity=0.214 Sum_probs=196.6
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+++..++.||.|+||.||++.. .+|+.||+|.+...... ....+.+|+.++.++. ||||+++++++..++..+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 3556778899999999999994 46899999998754332 3457889999999995 9999999999998889999999
Q ss_pred cCCCCCHHhhhh---ccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 103 YMPNETLAKHLF---HWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 103 ~~~g~sL~~~~~---~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
|+. +++.++.. ......+++..+..++.|++.||+|||+. + ++||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 84 LMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK-IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC-eeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 996 56655432 22346799999999999999999999985 7 999999999999999999999999998754332
Q ss_pred ---CCccCCCcccCccccccC---CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~---~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....++..|+|||.+.+. .++.++|||||||++|+|++|+.||..................+......+..++.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
T cd06616 162 IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSP 241 (288)
T ss_pred CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCH
Confidence 234578899999998765 58899999999999999999999886432110000000001111122223345778
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+++.+||+.+|++|||+.++++
T Consensus 242 ~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 242 SFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 9999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=294.99 Aligned_cols=243 Identities=21% Similarity=0.226 Sum_probs=201.1
Q ss_pred cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-----CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
|+..+.||.|++|.||+|... +++.|++|.+...... ..+.+.+|+.+++.++||||+++++++..++..++++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 556678999999999999955 7999999998654321 2467899999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 158 (258)
T cd06632 82 ELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRN-TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158 (258)
T ss_pred EecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence 99999999999863 356889999999999999999999999 999999999999999999999999988764433
Q ss_pred CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....++..|++||.+.... ++.++|+||||+++|+|++|+.||............. ........+..+++.+.++
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l 234 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG----RSKELPPIPDHLSDEAKDF 234 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHH----hcccCCCcCCCcCHHHHHH
Confidence 3456788999999987666 8899999999999999999999885543211111110 0011123445667899999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
+.+||+.+|.+||++.+++.
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHhhcCcccCcCHHHHhc
Confidence 99999999999999999986
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=293.73 Aligned_cols=243 Identities=21% Similarity=0.290 Sum_probs=200.7
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++.+.||.|+||.||++.. .+++.|++|.++..... ..+.+..|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 377889999999999999984 46899999998766553 467899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
+++++|.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHG-IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 999999999863 345889999999999999999999999 9999999999999999999999999987654322
Q ss_pred ----CccCCCcccCccccccCC---CCCCCceehHHHHHHHHhhCCCCCCChhhh-hhhhccccccccccccCCCCc--h
Q 012608 180 ----SYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTD--D 249 (460)
Q Consensus 180 ----~~~~t~~y~aPE~~~~~~---~~~~sDi~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~ 249 (460)
...++..|+|||.+.+.. .+.++||||||++++++++|..||...... ........ .....++. .
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 232 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-----GHKPPIPDSLQ 232 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-----CCCCCCCcccc
Confidence 235678999999998766 788999999999999999999988543111 11100000 01111222 2
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++..+.+++.+||+.+|.+|||+.+++.
T Consensus 233 ~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 233 LSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred cCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 3688999999999999999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=296.62 Aligned_cols=242 Identities=18% Similarity=0.270 Sum_probs=201.9
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.|++++.||.|+||.||+|.. .+++.||||.+...... ....+.+|+.++++++||||+++++++..++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 467888999999999999984 56899999988644322 2457889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
+|++|.+++. ...+++..+..++.|++.++.+||+++ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06641 85 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCC-eecCCCCHHhEEECCCCCEEEeecccceecccchhhhcc
Confidence 9999999884 456899999999999999999999999 999999999999999999999999988654432 23
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..++..|+|||.+.+...+.++|+|||||++++|++|..|+.............. ......+..++.++.+++.+
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~ 235 (277)
T cd06641 161 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK-----NNPPTLEGNYSKPLKEFVEA 235 (277)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc-----CCCCCCCcccCHHHHHHHHH
Confidence 4578889999999888889999999999999999999988764332221111110 11123344567889999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
||+.+|.+||++.++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 236 CLNKEPSFRPTAKELLK 252 (277)
T ss_pred HccCChhhCcCHHHHHh
Confidence 99999999999999998
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=294.87 Aligned_cols=243 Identities=18% Similarity=0.185 Sum_probs=195.1
Q ss_pred cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHH-hcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSV-GQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l-~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.||.|+||.||+|.. .+|+.||+|.+....... ...+..|..++ ...+||||+++++++..++..++|+||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5689999999999984 568999999986543221 23345555544 445899999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCccCCCc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 186 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~~t~~ 186 (460)
++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........++..
T Consensus 82 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRG-IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 999999863 456899999999999999999999999 99999999999999999999999999887665566678899
Q ss_pred ccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCC
Q 012608 187 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 266 (460)
Q Consensus 187 y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 266 (460)
|++||.+.+..++.++||||||+++|+|++|..||................. .........+++.+.+++.+||+.+|
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRI--NWPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--CCCCcccccCCHHHHHHHHHHccCCH
Confidence 9999999887789999999999999999999999865443322221111110 11112333567899999999999999
Q ss_pred CCCCChhHHHHHh
Q 012608 267 RERPNPKSLVTAL 279 (460)
Q Consensus 267 ~~Rps~~~il~~L 279 (460)
++||++.++.+.|
T Consensus 237 ~~R~~~~~~~~~l 249 (260)
T cd05611 237 AKRLGANGYQEIK 249 (260)
T ss_pred HHccCCCcHHHHH
Confidence 9999876555543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=299.56 Aligned_cols=265 Identities=16% Similarity=0.180 Sum_probs=206.8
Q ss_pred CCCCCcc--ccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-C
Q 012608 5 DGLPSFR--EFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-R 80 (460)
Q Consensus 5 ~~~~~~~--~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~ 80 (460)
+|+.+++ .+++.++..++++| .++..||.|+||.||++.. .+++.+|+|++.... .....+.+|+.+++++ +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~y---~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~ 77 (291)
T cd06639 2 YGLFPYNSSMLGLESLGDPTDTW---EIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPN 77 (291)
T ss_pred ccccCCChhhhhcccCCCCCCCe---EEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcC
Confidence 4454444 46777777776655 6677889999999999995 568999999986532 2346788999999999 8
Q ss_pred CCccceeeeEEeeC-----CeeEEEEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccC
Q 012608 81 NNRLTNLLGCCCEG-----DERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153 (460)
Q Consensus 81 h~~iv~~~~~~~~~-----~~~~lv~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp 153 (460)
||||+++++++... +..++||||++|++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||||
T Consensus 78 h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~dlkp 156 (291)
T cd06639 78 HPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR-IIHRDVKG 156 (291)
T ss_pred CCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCH
Confidence 99999999998653 3589999999999999987531 3457899999999999999999999999 99999999
Q ss_pred CcEEEcCCCCeEEccCCCcccCCCC----CCccCCCcccCccccccC-----CCCCCCceehHHHHHHHHhhCCCCCCCh
Q 012608 154 YRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSH 224 (460)
Q Consensus 154 ~Nill~~~~~~kl~DFg~a~~~~~~----~~~~~t~~y~aPE~~~~~-----~~~~~sDi~slG~~l~el~tg~~p~~~~ 224 (460)
+||+++.++.++|+|||++...... ....++..|+|||.+... .++.++|||||||++|+|++|+.|+...
T Consensus 157 ~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 157 NNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred HHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999998764432 234578899999987543 2678999999999999999999887654
Q ss_pred hhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 225 ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
........... ........+...+..+.+++.+||+.+|++||++.++++
T Consensus 237 ~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 237 HPVKTLFKIPR---NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cHHHHHHHHhc---CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 22111111100 001111123345578999999999999999999999987
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=294.68 Aligned_cols=245 Identities=19% Similarity=0.254 Sum_probs=203.4
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEee--CCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 101 (460)
+|++++.||.|+||.||++. ..+|+.||+|.++...... .+.+..|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 47788999999999999998 4568999999987544322 4578899999999999999999998753 45689999
Q ss_pred EcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 102 EYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCT-----SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 102 e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH-----~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
||+++++|.+++... ...++++..++.++.|++.||.||| +.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~-i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT-VLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc-ceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999988643 2457899999999999999999999 888 99999999999999999999999999887
Q ss_pred CCCCC----CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 175 SRDGK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 175 ~~~~~----~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
..... ...++..|+|||.+.+..++.++|+||||+++++|++|..|+.............. ......+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~ 234 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE-----GKFRRIPYRY 234 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc-----CCCCCCcccc
Confidence 65433 34678899999999888889999999999999999999998866543222221111 1112345567
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+..+.+++.+||+.+|.+|||+.++++
T Consensus 235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 235 SSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=297.05 Aligned_cols=259 Identities=19% Similarity=0.255 Sum_probs=208.3
Q ss_pred cCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEE
Q 012608 13 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 91 (460)
Q Consensus 13 ~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 91 (460)
+.+.++...-..-..|++...+|.|++|.||++... ++..|++|++..... ..+.+.+|++++++++|+||+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~ 84 (286)
T cd06614 6 AALKDIVSEGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSY 84 (286)
T ss_pred hhHhhhcCCCCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEE
Confidence 344444333333444677888999999999999965 689999999876544 467789999999999999999999999
Q ss_pred eeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 92 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 92 ~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
..++..++++||++|++|.+++.... ..+++..+..++.|++.||.|||+.| ++|+||+|+||+++.++.++|+|||+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g-i~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 85 LVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN-VIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred EECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCChhhEEEcCCCCEEECccch
Confidence 99999999999999999999997532 37999999999999999999999999 99999999999999999999999998
Q ss_pred cccCCCC----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 172 MKNSRDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 172 a~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
+...... ....++..|++||.+.+..++.++|+||||+++|+|++|..|+............... .......+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~ 239 (286)
T cd06614 163 AAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK---GIPPLKNP 239 (286)
T ss_pred hhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---CCCCCcch
Confidence 7654332 2345678899999998888999999999999999999999887643322111111110 00111122
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..++..+.+++.+||+.+|..|||+.+++.
T Consensus 240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 336688999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=301.48 Aligned_cols=248 Identities=20% Similarity=0.284 Sum_probs=197.9
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++++.||.|+||.||++... +++.||+|++...... ..+.+.+|+++++.++||||+++++++..++..++|+||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 5778899999999999999964 5899999998654332 245788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
+++++|.++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 999998887652 345899999999999999999999999 999999999999999999999999998764332 2
Q ss_pred CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc-------------------------
Q 012608 180 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN------------------------- 233 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~------------------------- 233 (460)
...++..|+|||.+.+. .++.++||||||+++++|++|..||............
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 34567899999998753 4678999999999999999999887643321100000
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..............+.++..+.+++.+||..+|.+||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000000112356788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=294.27 Aligned_cols=248 Identities=17% Similarity=0.271 Sum_probs=200.5
Q ss_pred cchhcccCCCCCCeEEEEEEcC--CcEEEEEEecCCCC----------CCHHHHHHHHHHHhc-CCCCccceeeeEEeeC
Q 012608 28 ENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNRMAW----------PDPRQFLEEARSVGQ-LRNNRLTNLLGCCCEG 94 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~ 94 (460)
|.+.+.||.|+||.||++.... ++.+|+|.+..... .....+.+|+.++.+ ++||||+++++++..+
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 6778899999999999999544 78899998854321 123457788888875 6999999999999999
Q ss_pred CeeEEEEEcCCCCCHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 95 DERLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
+..+++|||++|++|.+++.. .....+++..++.++.|++.+|.|||+ .+ ++|+||+|+||+++.++.++|+|||+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR-IVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc-eeecCCCHHHEEECCCCcEEEecccc
Confidence 999999999999999988743 134568999999999999999999997 56 99999999999999999999999999
Q ss_pred cccCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCc
Q 012608 172 MKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 172 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
+...... ....++..|++||.+.+..++.++|+||||+++|+|++|..||..................+ ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~ 236 (269)
T cd08528 161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP----LPEG 236 (269)
T ss_pred eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc----CCcc
Confidence 8765543 24567889999999998889999999999999999999998875543322222111111111 1122
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
..++.+.+++.+||+.||++||++.++..++.
T Consensus 237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 237 MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 45678999999999999999999999998775
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=294.87 Aligned_cols=242 Identities=21% Similarity=0.289 Sum_probs=199.9
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCC---CCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.|++++.||.|+||.||+|.. .+|+.|++|.++.... .....+.+|+.++++++ |||++++++++..++..++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467788999999999999994 5799999999875432 33567889999999996 999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++|++|.+++. .+.+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06917 82 EYAEGGSVRTLMK---AGPIAEKYISVIIREVLVALKYIHKVG-VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK 157 (277)
T ss_pred ecCCCCcHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence 9999999999885 347899999999999999999999999 999999999999999999999999988765433
Q ss_pred -CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCc-hhHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD-DDGTELV 255 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 255 (460)
....++..|+|||.+.++ .++.++|+||||+++|+|++|..||............... ....++. ..+.++.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 232 (277)
T cd06917 158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-----KPPRLEDNGYSKLLR 232 (277)
T ss_pred cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-----CCCCCCcccCCHHHH
Confidence 234678899999998654 4688999999999999999999988654322211111111 1112222 2668899
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||++||++.+++.
T Consensus 233 ~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 233 EFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred HHHHHHcCCCcccCcCHHHHhh
Confidence 9999999999999999999987
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=299.73 Aligned_cols=253 Identities=21% Similarity=0.206 Sum_probs=199.6
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-----CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
|++++.||.|++|.||+|.. .+|+.|+||+++..... ....+..|++++++++|+||+++++++...+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 67788899999999999995 46899999999765433 2345778999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC--
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 179 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-- 179 (460)
||+ +++|.+++.... ..+++..+..++.||+.||.|||+++ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW-ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC-eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 899999986422 36999999999999999999999999 9999999999999999999999999987654432
Q ss_pred --CccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc---------------------
Q 012608 180 --SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------- 235 (460)
Q Consensus 180 --~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------------------- 235 (460)
...++..|+|||.+.+ ..++.++|||||||++++|++|..+|..............
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 2345678999998864 4578899999999999999999766654321110000000
Q ss_pred -ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 236 -MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 236 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
...............+..+.+++.+||+.+|++|||+.+++. ..+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~--~~~~~~ 287 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE--HPYFSN 287 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh--CccccC
Confidence 000000011122345688999999999999999999999998 555444
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-39 Score=300.10 Aligned_cols=248 Identities=20% Similarity=0.271 Sum_probs=197.9
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
|++++.||.|++|.||+|.. .+|+.||||+++..... ....+.+|++++++++||||+++++++..++..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 67888999999999999985 46899999998754322 2457889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
+ ++|.+++.......+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 6 68988887655667899999999999999999999999 999999999999999999999999998755432 22
Q ss_pred ccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc---------------------c
Q 012608 181 YSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---------------------T 238 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---------------------~ 238 (460)
..++..|+|||.+.+.. ++.++||||||+++|+|+||+.||................ .
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34578899999887644 5889999999999999999999886543211110000000 0
Q ss_pred c--ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 D--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 ~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. ........+.+++++.++|.+||+.||.+|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0 00000112345678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=294.23 Aligned_cols=249 Identities=20% Similarity=0.292 Sum_probs=197.0
Q ss_pred cchhcccCCCCCCeEEEEEEc----CCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCC------
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ 95 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 95 (460)
|.+.+.||+|+||.||+|.+. +++.||||+++..... ..+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456788999999999999842 3688999998765432 2557889999999999999999999886532
Q ss_pred eeEEEEEcCCCCCHHhhhhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 96 ERLLVAEYMPNETLAKHLFHW----ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
..+++++|+++++|.+++... ....+++..+..++.|++.||+|||+++ |+|+||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN-FIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeecccchhhEEEcCCCCEEECcccc
Confidence 247889999999998876421 1235788999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccC
Q 012608 172 MKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 172 a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (460)
++..... ....++..|++||.+.+..++.++|||||||++|+|++ |..|+................ ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----~~ 234 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-----RL 234 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-----cC
Confidence 8765432 12234578999999988888999999999999999999 777765443322211111100 11
Q ss_pred CCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
..+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 235 ~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 235 KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 12345668999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=298.98 Aligned_cols=251 Identities=19% Similarity=0.280 Sum_probs=196.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.+..|++++.||.|++|.||+|... +++.||||.+...... ....+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 3567889999999999999999954 6899999998754322 2356778999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++ ++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 159 (291)
T cd07844 83 EYLD-TDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRR-VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT 159 (291)
T ss_pred ecCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence 9998 5899887643 347889999999999999999999999 999999999999999999999999988654321
Q ss_pred -CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhh--hhhh---h-------cccccc-------
Q 012608 179 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL--DLIR---D-------RNLQML------- 237 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~--~~~~---~-------~~~~~~------- 237 (460)
....++..|+|||.+.+ ..++.++||||+|+++|+|++|..||..... .... . ......
T Consensus 160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (291)
T cd07844 160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK 239 (291)
T ss_pred ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence 22345788999999875 4478899999999999999999988854321 0000 0 000000
Q ss_pred ------ccccccCCCCchhH--HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 ------TDSCLEGQFTDDDG--TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 ------~~~~~~~~~~~~~~--~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.............+ .++.+++.+||+.+|.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000000111222 67889999999999999999999876
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=299.18 Aligned_cols=248 Identities=21% Similarity=0.309 Sum_probs=199.3
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++.+.||.|+||.||+|... +++.|++|+++..... ....+.+|++++++++|+||+++++++..++..+++|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5788899999999999999954 6889999998754322 246789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
++++.+..+.. ....+++..+..++.||+.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSHN-IIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99877766554 3456899999999999999999999999 9999999999999999999999999987654332
Q ss_pred -CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc--------------------ccc--
Q 012608 180 -SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR--------------------NLQ-- 235 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~--------------------~~~-- 235 (460)
...++..|+|||.+.+. .++.++||||||+++|+|++|..||........... ...
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34567889999999887 788999999999999999999988764321110000 000
Q ss_pred ccc----cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 MLT----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ~~~----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
... .......++..++.++.+++.+||..+|++|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 000011233345789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=294.92 Aligned_cols=247 Identities=15% Similarity=0.203 Sum_probs=198.4
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCC------ee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD------ER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~------~~ 97 (460)
..|++++.||.|++|.||+|.. .+++.+++|++..... ..+.+.+|+.+++++ +||||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 4678889999999999999995 4688999999875543 346799999999999 7999999999986544 48
Q ss_pred EEEEEcCCCCCHHhhhhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 98 LLVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
++||||+++++|.+++.... +..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~-i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK-VIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEEccCCeEEECCCccceec
Confidence 99999999999999886433 467899999999999999999999999 999999999999999999999999988654
Q ss_pred CCC----CCccCCCcccCcccccc-----CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCC
Q 012608 176 RDG----KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 176 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (460)
... ....++..|+|||.+.. ..++.++|||||||++++|++|..||.............. ........
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~ 240 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR---NPPPTLKS 240 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc---cCCCCCCc
Confidence 332 34457889999998753 2367899999999999999999998864322111111111 11111112
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+...+.++.+++.+||..||++|||+.++++
T Consensus 241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 241 PENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 2336678999999999999999999999987
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=296.27 Aligned_cols=249 Identities=17% Similarity=0.235 Sum_probs=199.1
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 102 (460)
.++++++||.|++|.||++.. .+++.+|+|.+...... ....+.+|++++++++||||+++++++... +.+++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 467788999999999999995 46899999998754332 356789999999999999999999988643 46899999
Q ss_pred cCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 103 YMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|++|++|.+++... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~-i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK-IIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 99999998876531 3456889999999999999999999999 999999999999999999999999998754432
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh-----hhhhhccccccccccccCCCC--chhH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNLQMLTDSCLEGQFT--DDDG 251 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~ 251 (460)
....++..|++||.+.+..++.++|||||||++|+|++|..|+..... ......... ...+....... ...+
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (287)
T cd06621 161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN-MPNPELKDEPGNGIKWS 239 (287)
T ss_pred ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc-CCchhhccCCCCCCchH
Confidence 244568899999999888899999999999999999999988865411 111111000 01111111111 2356
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+.+++.+||+.+|.+|||+.++++
T Consensus 240 ~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 240 EEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 78999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=299.25 Aligned_cols=248 Identities=18% Similarity=0.231 Sum_probs=201.6
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
|..++.||+|+||.||++.. .+|..||+|++...... ....+.+|++++++++|||++++++++..++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 56788899999999999994 56899999998654322 235788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCccC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 183 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~~ 183 (460)
++ ++|.+.+.. ...++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........+
T Consensus 107 ~~-g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~-i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (317)
T cd06635 107 CL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG 183 (317)
T ss_pred CC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence 98 577776643 3456899999999999999999999999 99999999999999999999999999887766667778
Q ss_pred CCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 184 NLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 184 t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
+..|+|||.+. .+.++.++|||||||++|+|++|+.||............... ..........++.+.+++.+
T Consensus 184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~ 259 (317)
T cd06635 184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPTLQSNEWSDYFRNFVDS 259 (317)
T ss_pred CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc----cCCCCCCccccHHHHHHHHH
Confidence 99999999974 356888999999999999999999887553221111111110 11111233456789999999
Q ss_pred HcccCCCCCCChhHHHHHhccc
Q 012608 261 CLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~ 282 (460)
||+.+|.+||++.++++.+..+
T Consensus 260 ~l~~~p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 260 CLQKIPQDRPTSEELLKHMFVL 281 (317)
T ss_pred HccCCcccCcCHHHHHhChhhh
Confidence 9999999999999999855444
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=302.09 Aligned_cols=242 Identities=16% Similarity=0.247 Sum_probs=183.5
Q ss_pred cccCCCCCCeEEEEEEc---CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee--CCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~g 106 (460)
.+||+|+||.||+|+.. ++..||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~- 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE- 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-
Confidence 57899999999999854 35789999986543 23567899999999999999999998853 457899999997
Q ss_pred CCHHhhhhcc-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE----cCCCCeEEccCCCcccC
Q 012608 107 ETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 107 ~sL~~~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~DFg~a~~~ 175 (460)
++|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC-EEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 5777766421 1235788999999999999999999999 9999999999999 46678999999998765
Q ss_pred CCC-------CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc---------------
Q 012608 176 RDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR--------------- 232 (460)
Q Consensus 176 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~--------------- 232 (460)
... ....+|..|+|||.+.+. .++.++|||||||++|+|+||+.||.....+.....
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 432 234578899999998764 478999999999999999999988753221100000
Q ss_pred -----cc---------ccccccc---------c---cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 233 -----NL---------QMLTDSC---------L---EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 233 -----~~---------~~~~~~~---------~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.. ....... . ........+..+.+++.+||+.||.+|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 00 0000000 0 00011123456888999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=292.67 Aligned_cols=244 Identities=17% Similarity=0.266 Sum_probs=202.3
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
|.+.+.||.|+||.||++.. .+|..||+|.+..... ...+.+.+|++++++++|+||+++++.+..++..++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 66788899999999999995 4689999999865432 23567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC-eEEccCCCcccCCCCC----
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~-~kl~DFg~a~~~~~~~---- 179 (460)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++. ++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK-ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 9999999987544556899999999999999999999999 999999999999988754 6999999887655432
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...+++.|+|||.+.+..++.++|+||||+++++|++|..|+................ .....+..+..+.+++.
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~ 235 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY-----FAPISPNFSRDLRSLIS 235 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc-----CCCCCCCCCHHHHHHHH
Confidence 2357889999999988889999999999999999999999886543322221111111 11233456688999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||..+|++|||+.++++
T Consensus 236 ~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 236 QLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHhccChhhCcCHHHHhh
Confidence 999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=297.20 Aligned_cols=246 Identities=19% Similarity=0.266 Sum_probs=200.6
Q ss_pred hcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 31 VSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
...||+|+||.||++.. .+|+.||||++..........+.+|+.+++.++|+||+++++.+..++..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 45689999999999985 57999999998654444456789999999999999999999999999999999999999999
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CCccCCC
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNL 185 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~~~~t~ 185 (460)
.+++. .+.+++..+..++.|++.+|+|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 105 ~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~g-ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 180 (292)
T cd06657 105 TDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 180 (292)
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCc
Confidence 99874 456899999999999999999999999 999999999999999999999999987654322 2345788
Q ss_pred cccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccC
Q 012608 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265 (460)
Q Consensus 186 ~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 265 (460)
.|++||.+.+..++.++|+||+|+++|+|++|..||................... ......++..+.+++.+||+.+
T Consensus 181 ~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~ 257 (292)
T cd06657 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK---LKNLHKVSPSLKGFLDRLLVRD 257 (292)
T ss_pred cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc---cCCcccCCHHHHHHHHHHHhCC
Confidence 9999999988888999999999999999999999886543221111111111110 0112345678999999999999
Q ss_pred CCCCCChhHHHHHhcccccc
Q 012608 266 PRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 266 p~~Rps~~~il~~L~~~~~~ 285 (460)
|.+||++.+++. .++...
T Consensus 258 P~~R~~~~~ll~--~~~~~~ 275 (292)
T cd06657 258 PAQRATAAELLK--HPFLAK 275 (292)
T ss_pred cccCcCHHHHhc--ChHHhc
Confidence 999999999988 444433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=296.18 Aligned_cols=244 Identities=18% Similarity=0.276 Sum_probs=193.3
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHH-HhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARS-VGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~-l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|++++.||+|+||.||++.. .+|+.||+|+++..... ....+..|+.+ ++.++||||+++++++..++..+++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 578889999999999999995 46999999998765322 23456667665 5666999999999999999999999999
Q ss_pred CCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 104 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
++ ++|.+++... ....+++..++.++.|++.||.|||++ + ++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS-VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA 159 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 97 7888777542 235689999999999999999999997 7 999999999999999999999999998765432
Q ss_pred -CCccCCCcccCcccccc----CCCCCCCceehHHHHHHHHhhCCCCCCChh--hhhhhhccccccccccccCCCCchhH
Q 012608 179 -KSYSTNLAFTPPEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~----~~~~~~sDi~slG~~l~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.... ....... . ...........++
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~ 234 (283)
T cd06617 160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV-V----EEPSPQLPAEKFS 234 (283)
T ss_pred cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH-H----hcCCCCCCccccC
Confidence 22457889999998864 346889999999999999999998875321 1111111 0 0011111122456
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.++.+++.+||..+|.+||++.++++
T Consensus 235 ~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 235 PEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 88999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=292.79 Aligned_cols=243 Identities=19% Similarity=0.293 Sum_probs=204.5
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
+|++.+.||.|++|.||++... +|+.|++|++..... .....+.+|+..+.+++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 4678899999999999999954 599999999876654 33578999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
+|++|.+++.. ...+++..+..++.|++.++.|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~-~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 82 DGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRH-IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCC-CccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 99999999964 3678999999999999999999999 98 9999999999999999999999999987654432
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChh---hhhhhhccccccccccccCCCCch-hHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDD-DGTELV 255 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 255 (460)
...++..|+|||.+.+..++.++|+||||+++|+|+||..|+.... ......... .. .....+.. .+..+.
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~l~ 233 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----DG-PPPSLPAEEFSPEFR 233 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----cC-CCCCCCcccCCHHHH
Confidence 3456889999999988888999999999999999999998885542 111111111 11 11122333 678999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||..+|++|||+.++++
T Consensus 234 ~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 234 DFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred HHHHHHccCChhhCCCHHHHHh
Confidence 9999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=295.10 Aligned_cols=241 Identities=17% Similarity=0.239 Sum_probs=194.9
Q ss_pred cCCCCCCeEEEEE-EcCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 34 HGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 34 lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
||+|+||+||++. ..+|+.||+|.+..... .....+..|+.++++++||||+++++++...+..++||||++|++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 6899999999998 45699999999865332 2245677899999999999999999999999999999999999999
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CCccCCCc
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLA 186 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~~~~t~~ 186 (460)
.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR-IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 99987544457899999999999999999999999 999999999999999999999999988754432 23456788
Q ss_pred ccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCC
Q 012608 187 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 266 (460)
Q Consensus 187 y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p 266 (460)
|++||.+.+..++.++||||||+++++|++|+.||................. ......+...++.+.+++.+||+.+|
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p 237 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSPEAKDLCEALLQKDP 237 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCHHHHHHHHHHccCCh
Confidence 9999999888889999999999999999999998855322111110000000 01123445567899999999999999
Q ss_pred CCCC-----ChhHHHH
Q 012608 267 RERP-----NPKSLVT 277 (460)
Q Consensus 267 ~~Rp-----s~~~il~ 277 (460)
.+|| ++.+++.
T Consensus 238 ~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 238 EKRLGCRGGSADEVRE 253 (277)
T ss_pred hHccCCCcccHHHHHh
Confidence 9999 6666765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=288.68 Aligned_cols=246 Identities=20% Similarity=0.272 Sum_probs=204.5
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
+|.+.+.||.|++|.||++... +++.+++|++..........+.+|++++++++||||+++++++..++..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3677889999999999999964 689999999977655456789999999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CCcc
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYS 182 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~~~ 182 (460)
|++|.+++... ...+++..+..++.|++.+|.+||+.+ ++|+||+|+||++++++.++|+|||.+...... ....
T Consensus 81 ~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~-i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 81 GGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNG-IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred CCcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCC-EecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence 99999988642 257899999999999999999999999 999999999999999999999999998776554 3556
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
++..|++||.+.+...+.++|+||||+++++|++|..|+................. .........+..+.+++.+||
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l 235 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP---PGLRNPEKWSDEFKDFLKKCL 235 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCC---CCcCcccccCHHHHHHHHHHc
Confidence 78899999999888889999999999999999999988865422111111111000 000111123678999999999
Q ss_pred ccCCCCCCChhHHHH
Q 012608 263 QYEPRERPNPKSLVT 277 (460)
Q Consensus 263 ~~~p~~Rps~~~il~ 277 (460)
+.||++|||+.++++
T Consensus 236 ~~~p~~R~t~~~~l~ 250 (253)
T cd05122 236 QKNPEKRPTAEQLLK 250 (253)
T ss_pred cCChhhCCCHHHHhc
Confidence 999999999999986
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=296.69 Aligned_cols=251 Identities=20% Similarity=0.250 Sum_probs=197.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+.+|++.+.||.|++|.||+|.. .+|+.||+|++...... ..+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 35688999999999999999995 46899999998654322 2467889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-CCCeEEccCCCcccCCCC--
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~DFg~a~~~~~~-- 178 (460)
||++ ++|.+.+.......+++..+..++.||+.||+|||+++ ++|+||+|+||+++. ++.+||+|||++......
T Consensus 81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR-VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence 9997 58888776544445688889999999999999999999 999999999999985 567999999998754332
Q ss_pred --CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc--------------ccc--
Q 012608 179 --KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------LTD-- 239 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------------~~~-- 239 (460)
....+++.|+|||.+.+. .++.++||||||+++|+|+||..||............... +.+
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 233567899999988664 4788999999999999999999888644221111000000 000
Q ss_pred -------ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 -------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 -------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
........+..++++.+++.+||+.+|++||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000112345678999999999999999999999987
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=281.66 Aligned_cols=240 Identities=15% Similarity=0.147 Sum_probs=198.8
Q ss_pred cccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeC----CeeEEEEEcCC
Q 012608 32 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG----DERLLVAEYMP 105 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~----~~~~lv~e~~~ 105 (460)
++||-|-.|.|-... ..+|+++|+|++.. .....+|+++.-.. .|||||.++++|.+. ..+.+|||.|+
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me 142 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME 142 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence 678999999999988 55799999999743 34566899887777 799999999998643 46789999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCcccCCCC---C
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---K 179 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~~~~~---~ 179 (460)
||.|...+..+..+.+++.++..|++||+.|+.|||+.+ |.||||||+|+|... +..+||+|||+|+..... .
T Consensus 143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n-IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~ 221 (400)
T KOG0604|consen 143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN-IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM 221 (400)
T ss_pred chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc-hhhccCChhheeeecCCCCcceEecccccccccCCCcccc
Confidence 999999999888889999999999999999999999999 999999999999964 456899999999976533 4
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccc--ccccCCCCchhHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--SCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l 257 (460)
+-+.|+.|.|||++...+++..+|+||+||++|-|++|.+||.......+..+....+.. ..++..-...+++...++
T Consensus 222 TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdl 301 (400)
T KOG0604|consen 222 TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDL 301 (400)
T ss_pred CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHH
Confidence 556799999999998888999999999999999999999999765433332222222111 112222334678999999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
|+++|..+|.+|.|+.++++
T Consensus 302 IR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 302 IRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred HHHHhcCCchhheeHHHhhc
Confidence 99999999999999999987
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-38 Score=289.75 Aligned_cols=237 Identities=19% Similarity=0.225 Sum_probs=196.9
Q ss_pred cCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 34 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 34 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
||.|++|.||+++.. +++.|++|++...... ..+.+.+|+.+++.++||||+++++.+..++..++++||++|++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999954 5899999998754322 246799999999999999999999999999999999999999999
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CCccCCCc
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLA 186 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~~~~t~~ 186 (460)
.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNRG-IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999863 346899999999999999999999999 999999999999999999999999998766543 23467889
Q ss_pred ccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChh--hhhhhhccccccccccccCCCCchhHHHHHHHHHHHccc
Q 012608 187 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 264 (460)
Q Consensus 187 y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~ 264 (460)
|++||.+.+..++.++|+||||+++|+|++|..|+.... ......... .......++...+.++.+++.+||+.
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~l~~ 233 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL----KGNGKLEFPNYIDKAAKDLIKQLLRR 233 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHh----ccCCCCCCCcccCHHHHHHHHHHccC
Confidence 999999988888999999999999999999999886543 111111111 11112234444578999999999999
Q ss_pred CCCCCCC-----hhHHHH
Q 012608 265 EPRERPN-----PKSLVT 277 (460)
Q Consensus 265 ~p~~Rps-----~~~il~ 277 (460)
+|.+||+ +.++++
T Consensus 234 ~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 234 NPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ChhhCcCCcccCHHHHhc
Confidence 9999999 777776
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=298.12 Aligned_cols=260 Identities=22% Similarity=0.268 Sum_probs=201.2
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeC--Cee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG--DER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 97 (460)
++.+.|++++.||.|+||.||+|.. .+|+.||+|+++...... ...+.+|+.++++++|+||+++++++... +..
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 4667899999999999999999995 469999999987543222 34567899999999999999999998754 568
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||+. ++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 84 ~lv~e~~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 84 FLVMEYCE-QDLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHENF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEEecCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 99999997 588888764 2367899999999999999999999999 99999999999999999999999999876543
Q ss_pred C----CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc-----------c---
Q 012608 178 G----KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-----------T--- 238 (460)
Q Consensus 178 ~----~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-----------~--- 238 (460)
. ....++..|+|||.+.+ ..++.++|||||||++|+|++|..||................ .
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 161 PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred ccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 2 12234678999999865 457889999999999999999998886543221111100000 0
Q ss_pred ---cccccC-------CCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCC
Q 012608 239 ---DSCLEG-------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287 (460)
Q Consensus 239 ---~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~ 287 (460)
...... ......++.+.++|.+||+.||++|||+.+++. .++.....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~--h~~f~~~~ 297 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE--SSYFKEKP 297 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc--ChhhccCC
Confidence 000000 001124678899999999999999999999997 45554433
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=293.06 Aligned_cols=239 Identities=18% Similarity=0.187 Sum_probs=189.2
Q ss_pred ccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhc---CCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 33 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQ---LRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~---l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.||+|+||.||++.. .+|+.+|+|.+...... ....+.+|..+++. .+||||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 379999999999995 56899999998654322 12334455544443 479999999999998899999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--CCccC
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYST 183 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--~~~~~ 183 (460)
|++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||||+|||+++++.++|+|||++...... ....+
T Consensus 81 ~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (279)
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCC
Confidence 9999998863 456999999999999999999999999 999999999999999999999999998654332 23468
Q ss_pred CCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 184 NLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 184 t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
+..|+|||.+.. ..++.++||||+||++++|++|..||........... ... ........+...+.++.+++.+||
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~li~~~l 234 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI--DRM-TLTVNVELPDSFSPELKSLLEGLL 234 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHH--HHH-hhcCCcCCccccCHHHHHHHHHHh
Confidence 899999999864 4578999999999999999999999864321111100 000 011122345667789999999999
Q ss_pred ccCCCCCC-----ChhHHHH
Q 012608 263 QYEPRERP-----NPKSLVT 277 (460)
Q Consensus 263 ~~~p~~Rp-----s~~~il~ 277 (460)
..||.+|| |++++++
T Consensus 235 ~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 235 QRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred cCCHHHhcCCCCCCHHHHHh
Confidence 99999999 5998887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=299.75 Aligned_cols=244 Identities=19% Similarity=0.239 Sum_probs=190.0
Q ss_pred ccCCC--CCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 33 EHGEK--APNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 33 ~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
.||.| +||+||++.. .+|+.||+|++....... .+.+.+|+.+++.++||||+++++++..++..++|+||++++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 44555 9999999995 579999999987543322 467889999999999999999999999999999999999999
Q ss_pred CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---------
Q 012608 108 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--------- 178 (460)
Q Consensus 108 sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--------- 178 (460)
+|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.++++||+.+......
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG-YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence 9999887544456899999999999999999999999 999999999999999999999999854322110
Q ss_pred --CCccCCCcccCccccccC--CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-------------------
Q 012608 179 --KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------- 235 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~--~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------------------- 235 (460)
....++..|+|||++.+. .++.++|||||||++|+|++|..||..............
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRM 243 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhh
Confidence 111235679999999763 478899999999999999999998865422111100000
Q ss_pred ----------------------ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 ----------------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ----------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...........+..++..+.+++.+||+.||++|||+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 000000111122346778999999999999999999999987
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=335.70 Aligned_cols=243 Identities=19% Similarity=0.214 Sum_probs=202.0
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
++-...||.|.||.||.+. .++|.-.|+|.++.... ...+...+|..++..+.|||+|+++|+-.+.+..+|.||||
T Consensus 1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence 5667788999999999998 77899999998865432 23567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 178 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------ 178 (460)
.||+|.+.+.+ ++..++.....+..|++.|+.|||++| ||||||||+||+++.+|.+|++|||.|......
T Consensus 1317 ~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~g-IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~ 1393 (1509)
T KOG4645|consen 1317 EGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHG-IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPG 1393 (1509)
T ss_pred ccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcC-ceecCCCccceeeecCCcEEeecccceeEecCchhcCCH
Confidence 99999999963 445677777888999999999999999 999999999999999999999999998765433
Q ss_pred --CCccCCCcccCccccccCC---CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~---~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
+.+.||+.|||||++.+.. ...+.||||||||+.||+||+.||..-.. .|.. .-.+.....+.+|..++++
T Consensus 1394 el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-e~aI---My~V~~gh~Pq~P~~ls~~ 1469 (1509)
T KOG4645|consen 1394 ELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-EWAI---MYHVAAGHKPQIPERLSSE 1469 (1509)
T ss_pred HHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-hhHH---HhHHhccCCCCCchhhhHh
Confidence 3567999999999997644 46699999999999999999999843211 1110 0011111223566678999
Q ss_pred HHHHHHHHcccCCCCCCChhHHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
-.+|+.+||+.||+.|.++.|+++
T Consensus 1470 g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1470 GRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HHHHHHHHHhcCchhhhHHHHHHH
Confidence 999999999999999999999887
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=294.35 Aligned_cols=248 Identities=20% Similarity=0.265 Sum_probs=197.5
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
|++++.||.|++|.||+|.. .+|+.|++|++...... ....+.+|++++++++||||+++++++..++..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56788999999999999984 57999999998754322 2457889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
+ ++|.+++.......+++..+..++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~-~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR-VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 6 68999886544447899999999999999999999999 999999999999999999999999998754322 22
Q ss_pred ccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc--------------c-------cc
Q 012608 181 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------M-------LT 238 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------------~-------~~ 238 (460)
..++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.............. . ..
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 3457889999988664 468899999999999999999988864422110000000 0 00
Q ss_pred --cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 --DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 --~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.........+..+..+.+++.+||+.+|.+|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000011123456678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-38 Score=295.21 Aligned_cols=248 Identities=12% Similarity=0.082 Sum_probs=185.3
Q ss_pred cccchhcccCCCCCCeEEEEEEcC----CcEEEEEEecCCCCCCH-----------HHHHHHHHHHhcCCCCccceeeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPDP-----------RQFLEEARSVGQLRNNRLTNLLGC 90 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~~iv~~~~~ 90 (460)
..|++.+.||+|+||.||+|...+ +..+++|+......... .....+...+..++|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 468999999999999999999543 45667776433222110 112234455667799999999997
Q ss_pred EeeCC----eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEE
Q 012608 91 CCEGD----ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 166 (460)
Q Consensus 91 ~~~~~----~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl 166 (460)
+.... ..+++++++. .++.+.+.. ....++..+..++.|++.||.|||+++ |+||||||+|||++.++.++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHG-ISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCcEEE
Confidence 65543 3468888875 577766643 234678889999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC-----------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh-hhhh----
Q 012608 167 STFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIR---- 230 (460)
Q Consensus 167 ~DFg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~-~~~~---- 230 (460)
+|||+++..... ....||+.|+|||.+.+..++.++|||||||++++|++|+.||..... ....
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 999998754311 224689999999999988899999999999999999999999865421 1110
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 231 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
......+... ......+++++.+++..||+.+|++||++.++++.|+
T Consensus 248 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 248 CDFIKRLHEG---KIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHHhhhh---hhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 0011111111 1123345788999999999999999999999998763
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=287.72 Aligned_cols=245 Identities=20% Similarity=0.259 Sum_probs=206.8
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|++.+.||.|+||.||++.. .+++.|++|++..... .....+.+|+++++.++|||++++.+.+..++..++|+|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 367888999999999999995 4689999999976544 3456789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC--
Q 012608 104 MPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-- 179 (460)
++|++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~-~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK-ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 99999999887532 467999999999999999999999999 9999999999999999999999999987654432
Q ss_pred --CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 180 --SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 180 --~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
...+++.|+|||...+..++.++|+||+|+++++|++|..|+................ ....+...+..+.++
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YPPIPSQYSSELRNL 234 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHH
Confidence 3457788999999988889999999999999999999998886543332222211111 123344667899999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
+.+||..+|++|||+.++++
T Consensus 235 i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 235 VSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 99999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=296.59 Aligned_cols=249 Identities=19% Similarity=0.231 Sum_probs=194.1
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCe-----e
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE-----R 97 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~-----~ 97 (460)
.|++.+.||+|+||.||+|.. .+|+.||||.++..... ....+.+|+.+++.+ +||||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 477888999999999999995 46999999998654322 246788999999999 56999999999877655 8
Q ss_pred EEEEEcCCCCCHHhhhhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-CCCeEEccCCCcc
Q 012608 98 LLVAEYMPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMK 173 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~DFg~a~ 173 (460)
|+||||+++ +|.+++.... ...+++..++.++.||+.||.|||+++ ++||||+|+||+++. ++.+||+|||++.
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG-VMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEecCCCeEEEeecccce
Confidence 999999985 7888775432 346899999999999999999999999 999999999999998 8899999999987
Q ss_pred cCCCC----CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc----------
Q 012608 174 NSRDG----KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT---------- 238 (460)
Q Consensus 174 ~~~~~----~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~---------- 238 (460)
..... ....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||...............+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 54322 22345788999998865 3478999999999999999999988865432111100000000
Q ss_pred ------------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 ------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 ------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+.......+.++.++.++|.+||..||.+||++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000001112346788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=292.98 Aligned_cols=249 Identities=20% Similarity=0.236 Sum_probs=193.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..|++++.||+|+||.||+|.. .+|+.|++|.+....... ...+.+|+.+++.++|+||+++++++..++..++||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 4578889999999999999984 568999999986544332 34678999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
+. ++|.+.+.. ....+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 161 (291)
T cd07870 85 MH-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS 161 (291)
T ss_pred cc-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence 96 677666643 2346788889999999999999999999 999999999999999999999999988754322 2
Q ss_pred CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhh--hhhhc----------------ccc----c
Q 012608 180 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDR----------------NLQ----M 236 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~--~~~~~----------------~~~----~ 236 (460)
...++..|+|||.+.+. .++.++||||||+++|+|++|..||...... .+... ... .
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07870 162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE 241 (291)
T ss_pred CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence 33468899999998754 4788999999999999999999888543211 00000 000 0
Q ss_pred cccccccCC---CC--chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 LTDSCLEGQ---FT--DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 ~~~~~~~~~---~~--~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......... .. ...+..+.+++.+|+..||.+|||+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000 00 012568899999999999999999999876
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-37 Score=293.13 Aligned_cols=243 Identities=20% Similarity=0.233 Sum_probs=197.7
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+..+.+||.|+||+||+|+. .+|+.|++|++....... ...+.+|+++++.++|||++++++++..++..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 45567799999999999994 468999999986543322 35688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCccC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 183 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~~ 183 (460)
+. ++|.+.+.. ...++++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++..........+
T Consensus 103 ~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~g-i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~ 179 (313)
T cd06633 103 CL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHN-MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG 179 (313)
T ss_pred CC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence 97 577777653 3456899999999999999999999999 99999999999999999999999999877666666778
Q ss_pred CCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 184 NLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 184 t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
+..|+|||.+. ...++.++|||||||++|+|++|..|+............... ..........+..+.+++.+
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~ 255 (313)
T cd06633 180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----DSPTLQSNEWTDSFRGFVDY 255 (313)
T ss_pred cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----CCCCCCccccCHHHHHHHHH
Confidence 99999999984 355788999999999999999999887654221111111110 01111223455789999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
||+.+|.+||++.+++.
T Consensus 256 ~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 256 CLQKIPQERPASAELLR 272 (313)
T ss_pred HccCChhhCcCHHHHhc
Confidence 99999999999999986
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=292.09 Aligned_cols=246 Identities=19% Similarity=0.239 Sum_probs=192.4
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeC--CeeEEEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG--DERLLVAE 102 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~--~~~~lv~e 102 (460)
|++++.||+|+||.||++. ..+++.||+|+++..... ......+|+.+++++ +||||+++++++..+ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 5678899999999999999 456899999998754322 233456799999999 499999999999877 88999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---C
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---K 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~ 179 (460)
|++ ++|.+.+.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++. +.+||+|||++...... .
T Consensus 81 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~-i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMD-MNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNG-IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCC-ccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 997 578777754 2357899999999999999999999999 999999999999999 99999999998765433 2
Q ss_pred CccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc-------c---------ccccccc
Q 012608 180 SYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------Q---------MLTDSCL 242 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------~---------~~~~~~~ 242 (460)
...++..|+|||.+.. ..++.++|||||||++|+|++|..||+............ . .......
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 3457889999997654 457889999999999999999998886543211100000 0 0000000
Q ss_pred c-------CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 243 E-------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 243 ~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. .......+..+.+++.+||..+|++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0 0112345789999999999999999999999987
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=288.63 Aligned_cols=243 Identities=19% Similarity=0.211 Sum_probs=198.2
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC-----CCCHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA-----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 98 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 98 (460)
+|++.+.||+|+||.||++.. .+|+.|++|.+.... ......+.+|++++++++||||+++++++... +..+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 577889999999999999994 569999999875321 11245788999999999999999999998654 4688
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+++||++|++|.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~-i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 83 IFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNM-IVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 99999999999998863 356889999999999999999999999 999999999999999999999999998754321
Q ss_pred -------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 179 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 179 -------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
....++..|+|||.+.+...+.++|+|||||++++|++|+.||.......... ..........++...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~p~~~~ 235 (264)
T cd06653 160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIF----KIATQPTKPMLPDGVS 235 (264)
T ss_pred cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHH----HHHcCCCCCCCCcccC
Confidence 23457889999999988888999999999999999999998886432211111 1111112234566788
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+.+++.+||. +|..||++.+++.
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhc
Confidence 899999999999 5799999998876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=285.77 Aligned_cols=243 Identities=23% Similarity=0.306 Sum_probs=204.2
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|.+...||.|++|.||++.. .+++.|++|.+..... .....+.+|++++++++|||++++++++..++..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 367788999999999999985 4688999999977654 2356799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
+++++|.+++.. ...+++..+..++.|++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 81 AENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQG-VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred CCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 999999999864 367899999999999999999999999 9999999999999999999999999988665433
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...++..|+|||...+...+.++||||+|+++++|++|..|+.............. ......+...+..+.+++.
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~ 232 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ-----DDHPPLPEGISPELKDFLM 232 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-----cCCCCCCCCCCHHHHHHHH
Confidence 34678899999998877788999999999999999999988754322111111110 1112345566789999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||..+|++|||+.+++.
T Consensus 233 ~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHhCChhhCcCHHHHhc
Confidence 999999999999999985
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=302.18 Aligned_cols=248 Identities=17% Similarity=0.248 Sum_probs=193.6
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeC-----CeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 98 (460)
.+|++++.||+|+||.||+|. ..+|+.||+|+++..... ....+.+|+.++++++||||+++++++... ...+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 357889999999999999998 457999999998643322 245688899999999999999999987544 3479
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+++||++ ++|.+.+. ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 85 lv~e~~~-~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~-ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 85 IVQELME-TDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred EEehhcc-cCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 9999997 58887773 467999999999999999999999999 999999999999999999999999998754322
Q ss_pred -------CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc-----------c-----
Q 012608 179 -------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------L----- 234 (460)
Q Consensus 179 -------~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~----- 234 (460)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||............ .
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 23457889999998754 45788999999999999999999888653211100000 0
Q ss_pred -------ccccc--ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 235 -------QMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 235 -------~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
..... ........+..++++.+++.+||+.+|.+|||+.++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 000000112346789999999999999999999999984
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=286.49 Aligned_cols=244 Identities=19% Similarity=0.251 Sum_probs=203.9
Q ss_pred cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeEEEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVAE 102 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 102 (460)
|.+.+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+.++++++||||+++++.+... +..++++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 566788899999999999955 699999999876543 3367899999999999999999999999888 88999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|+++++|.+++.. ...+++..++.++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~-~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 82 YVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG-IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158 (260)
T ss_pred ecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence 9999999999874 338899999999999999999999999 999999999999999999999999988765543
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....++..|++||.+.+...+.++||||||+++++|++|..||......... .............+...+..+.+
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA---LYKIGSSGEPPEIPEHLSEEAKD 235 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH---HHhccccCCCcCCCcccCHHHHH
Confidence 2346788999999998888999999999999999999999888654311000 00111111222345566789999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||+.+|.+||++.++++
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhh
Confidence 999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=301.15 Aligned_cols=246 Identities=15% Similarity=0.200 Sum_probs=194.6
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeC------Ce
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 96 (460)
..|++++.||+|+||.||++.. .+|+.||+|.+..... .....+.+|+.++++++||||+++++++... ..
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 5678889999999999999994 5799999999865322 2345678899999999999999999988643 34
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.++||||++ ++|.+.+.. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 96 ~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 96 VYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred EEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 799999997 588887742 2889999999999999999999999 9999999999999999999999999988654
Q ss_pred CC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc------------------
Q 012608 177 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------ 235 (460)
Q Consensus 177 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------------------ 235 (460)
.. ....++..|+|||.+.+..++.++|||||||++++|++|+.||..............
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 43 234578899999999988899999999999999999999988864321100000000
Q ss_pred ---------------cccc----ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 ---------------MLTD----SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ---------------~~~~----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.... +......+...+..+.+++.+||+.||++|||+.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000 00000012234677899999999999999999999997
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-38 Score=293.27 Aligned_cols=249 Identities=18% Similarity=0.258 Sum_probs=197.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
+|+++++||.|++|.||+|+. .+|+.||||+++..... ....+.+|+.++++++||||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 367889999999999999995 46899999998765433 3567788999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 105 PNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
+ ++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... .
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR-VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFS 158 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccc
Confidence 8 48888775432 246899999999999999999999999 999999999999999999999999988754322 2
Q ss_pred CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc-----------------ccccccc
Q 012608 180 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-----------------QMLTDSC 241 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~-----------------~~~~~~~ 241 (460)
...++..|++||.+.+. .++.++||||||+++|+|++|..||............. .......
T Consensus 159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07836 159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF 238 (284)
T ss_pred cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence 34567889999988654 46889999999999999999998886543221111000 0000000
Q ss_pred c------cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 242 L------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 242 ~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+ .....+..+..+.+++.+||+.||.+||++.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 01112245678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=293.08 Aligned_cols=245 Identities=20% Similarity=0.227 Sum_probs=199.0
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.|..++.||.|+||.||+|.. .++..|++|.+...... ....+.+|+++++.++|+|++++++++..++..++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 466788899999999999994 46889999998643222 24568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCcc
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~ 182 (460)
|+. ++|.+.+.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..........
T Consensus 96 ~~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (308)
T cd06634 96 YCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV 172 (308)
T ss_pred ccC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHhEEECCCCcEEECCcccceeecCccccc
Confidence 997 578776643 3456899999999999999999999999 9999999999999999999999999988776666677
Q ss_pred CCCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 183 TNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 183 ~t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
++..|+|||.+. ....+.++|||||||++|+|++|..|+............... ..........+..+.++|.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~ 248 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVD 248 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc----CCCCcCcccccHHHHHHHH
Confidence 899999999974 345788999999999999999999887543221111111110 1111123356688999999
Q ss_pred HHcccCCCCCCChhHHHHH
Q 012608 260 RCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~ 278 (460)
+||..+|.+||++.+++..
T Consensus 249 ~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 249 SCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HHhhCCcccCCCHHHHhhC
Confidence 9999999999999999983
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=256.92 Aligned_cols=248 Identities=20% Similarity=0.277 Sum_probs=202.4
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|..+.+||+|.||+||+|+ ..+++.||+|.+.....+ -.....+|+-+++.++|.|||+++++.-.+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45667889999999999999 667999999998765433 366789999999999999999999999888899999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
|+ ..|..+... -++.++.+.+.+++.|+++||.++|+++ ++|||+||.|.||+.+|.+|++|||+++-++-..
T Consensus 83 cd-qdlkkyfds-lng~~d~~~~rsfmlqllrgl~fchshn-vlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 83 CD-QDLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSHN-VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred hh-HHHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhhh-hhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 97 889888865 4678999999999999999999999999 9999999999999999999999999999876542
Q ss_pred CccCCCcccCccccccCC-CCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcc--------------cccccccccc
Q 012608 180 SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN--------------LQMLTDSCLE 243 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~--------------~~~~~~~~~~ 243 (460)
.-..|..|.+|+++.+.. |+...|+||.||++.|+.. |++.|++...+....+. ...+++..+.
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y 239 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY 239 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence 335688999999998866 7889999999999999987 55667765443222211 1122222222
Q ss_pred CCCC---------chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 244 GQFT---------DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 244 ~~~~---------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.++ +.++..-+++++++|.-+|.+|.++++.++
T Consensus 240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 2222 223445688999999999999999999887
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=316.07 Aligned_cols=250 Identities=16% Similarity=0.177 Sum_probs=184.0
Q ss_pred cccchhcccCCCCCCeEEEEEEcC--CcEEEEEEecC-----------------CCCCCHHHHHHHHHHHhcCCCCccce
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNR-----------------MAWPDPRQFLEEARSVGQLRNNRLTN 86 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~-----------------~~~~~~~~~~~E~~~l~~l~h~~iv~ 86 (460)
..|+++++||+|+||+||++.... +..+++|.+.. ........+.+|+.++++++||||++
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 568999999999999999987432 22222221110 01112456889999999999999999
Q ss_pred eeeEEeeCCeeEEEEEcCCCCCHHhhhhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC
Q 012608 87 LLGCCCEGDERLLVAEYMPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 163 (460)
Q Consensus 87 ~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~ 163 (460)
+++++...+..|+|++++. ++|.+++.... ........+..++.||+.||.|||+++ |+||||||+|||++.++.
T Consensus 228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g-IiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK-LIHRDIKLENIFLNCDGK 305 (501)
T ss_pred EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCC
Confidence 9999999999999999996 67777664311 122345677889999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCC-----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh----hhhhhc-c
Q 012608 164 PRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDR-N 233 (460)
Q Consensus 164 ~kl~DFg~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~----~~~~~~-~ 233 (460)
+||+|||++...... ....||..|+|||++.+..++.++|||||||++|||++|..++..... ..+... .
T Consensus 306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~ 385 (501)
T PHA03210 306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIID 385 (501)
T ss_pred EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHH
Confidence 999999999765432 235689999999999988899999999999999999999865432211 000000 0
Q ss_pred -----ccccccc--------------cccCCC-----CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 -----LQMLTDS--------------CLEGQF-----TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 -----~~~~~~~--------------~~~~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.....+. .....+ ...++.++..++.+||+.||.+|||+.+++.
T Consensus 386 ~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 386 SLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred hcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000000 000000 1124467888899999999999999999987
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=296.57 Aligned_cols=248 Identities=17% Similarity=0.249 Sum_probs=193.1
Q ss_pred cchhcccCCCCCCeEEEEEE-c--CCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-E--NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 99 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~l 99 (460)
|+++++||+|+||.||+|.. . +++.||+|.+.... ....+.+.+|+.++++++||||+++++++... +..++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 67888999999999999995 3 58999999997643 33356788999999999999999999999887 78999
Q ss_pred EEEcCCCCCHHhhhhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC----CCCeEEccCCCc
Q 012608 100 VAEYMPNETLAKHLFHW---ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLM 172 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~----~~~~kl~DFg~a 172 (460)
||||++ ++|.+.+... ....+++..++.++.|++.||.|||+++ ++||||||+||+++. ++.+||+|||++
T Consensus 82 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC-EeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 999997 4676666432 1236889999999999999999999999 999999999999998 899999999998
Q ss_pred ccCCCC-------CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh---------hc---
Q 012608 173 KNSRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---------DR--- 232 (460)
Q Consensus 173 ~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~---------~~--- 232 (460)
...... ....++..|+|||.+.+. .++.++|||||||++++|++|..||......... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 765332 233567889999988764 4788999999999999999999887543221100 00
Q ss_pred -----------------cccccccccccCCCC-----------chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 233 -----------------NLQMLTDSCLEGQFT-----------DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 233 -----------------~~~~~~~~~~~~~~~-----------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.............++ ...+.++.+++.+||+.||++|||+.++++
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000000000111 134568999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=288.32 Aligned_cols=237 Identities=23% Similarity=0.264 Sum_probs=195.1
Q ss_pred cCCCCCCeEEEEEEc-CCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 34 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 34 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
||.|+||.||++... +|+.+++|.+..... ...+.+.+|++++++++||||+++++.+..++..++++||++|++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999965 599999999876543 2356788999999999999999999999999999999999999999
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----------
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------- 178 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----------- 178 (460)
.+++.. .+.+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNG-IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999874 347899999999999999999999999 999999999999999999999999987754322
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch--hHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD--DGTELV 255 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 255 (460)
....++..|++||.+.....+.++||||||++++++++|..||................. ..+.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI------EWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc------CCCccccCCHHHH
Confidence 223567889999999888889999999999999999999998865543332222111100 11122 378999
Q ss_pred HHHHHHcccCCCCCCChhHHHHHh
Q 012608 256 RLASRCLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~~L 279 (460)
+++.+||+.+|.+|||+..+.+.|
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHHh
Confidence 999999999999999995555444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=298.95 Aligned_cols=259 Identities=17% Similarity=0.238 Sum_probs=200.5
Q ss_pred cCHHHHHHHh-cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceee
Q 012608 13 FTLEQLKNAT-SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLL 88 (460)
Q Consensus 13 ~~~~~~~~~~-~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~ 88 (460)
|+.+|+.+++ .-...|.+...||.|+||.||+|.. .+|+.||+|+++..... ....+.+|+.++++++||||++++
T Consensus 1 ~~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 80 (342)
T cd07879 1 FYREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLL 80 (342)
T ss_pred CchhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchh
Confidence 5566777665 3334678889999999999999994 56999999998754322 245688999999999999999999
Q ss_pred eEEeeCC------eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC
Q 012608 89 GCCCEGD------ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 162 (460)
Q Consensus 89 ~~~~~~~------~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~ 162 (460)
+++.... ..++|+||+. .+|.+.. +..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~-i~H~dlkp~NIll~~~~ 154 (342)
T cd07879 81 DVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAG-IIHRDLKPGNLAVNEDC 154 (342)
T ss_pred heecccccCCCCceEEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCC
Confidence 9986542 4689999997 5777655 246889999999999999999999999 99999999999999999
Q ss_pred CeEEccCCCcccCCCC-CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-----
Q 012608 163 NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ----- 235 (460)
Q Consensus 163 ~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~----- 235 (460)
.++|+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..............
T Consensus 155 ~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (342)
T cd07879 155 ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 234 (342)
T ss_pred CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9999999998765433 33456888999999876 4578899999999999999999999875432111100000
Q ss_pred --------------cc---ccccccC---CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 --------------ML---TDSCLEG---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 --------------~~---~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.. ....+.. ...+..++.+.+++.+||+.||.+||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 235 GPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred CHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0000000 011235678999999999999999999999986
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=291.00 Aligned_cols=247 Identities=22% Similarity=0.294 Sum_probs=196.1
Q ss_pred cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeEEEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLLVAE 102 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 102 (460)
|+++++||.|++|.||+|... +|+.+|+|++.... ......+.+|+.++++++|||++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999954 58999999998764 22346788999999999999999999999887 78999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC---
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK--- 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~--- 179 (460)
|++ ++|.+++... ...+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~-~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMD-HDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNG-ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred ccc-ccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 998 5888887542 357899999999999999999999999 9999999999999999999999999987655432
Q ss_pred --CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc-----------ccc------
Q 012608 180 --SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-----------LTD------ 239 (460)
Q Consensus 180 --~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~-----------~~~------ 239 (460)
...++..|+|||.+.+. .++.++||||||+++++|+||+.||............... ...
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 23457789999987653 4788999999999999999999888654322111100000 000
Q ss_pred --------ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 --------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 --------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......+...+++.+.+++.+||+.+|.+||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000111123778999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=298.40 Aligned_cols=247 Identities=20% Similarity=0.311 Sum_probs=199.9
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCC-----eeE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERL 98 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 98 (460)
+|++.+.||.|++|.||++.. .+|+.|+||++.... ....+.+.+|+.+++.++||||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 377889999999999999995 459999999987644 233568999999999999999999999987765 789
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
++|||++ ++|.+++.. ...+++..+..++.|++.||.|||+.| ++|+||||+||+++.++.++|+|||++......
T Consensus 81 lv~e~~~-~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~g-i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELME-TDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSAN-VIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchh-hhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 9999997 589888863 448999999999999999999999999 999999999999999999999999998865543
Q ss_pred C-------CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc------------
Q 012608 179 K-------SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------ 238 (460)
Q Consensus 179 ~-------~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~------------ 238 (460)
. ...++..|+|||.+.+. .++.++|+||||+++++|++|..||.................
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 2 34567889999999877 789999999999999999999998865433211111000000
Q ss_pred -------------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 -------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 -------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.........+..+..+.+++.+||+.+|.+|||+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 000001122346788999999999999999999999997
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=285.83 Aligned_cols=245 Identities=18% Similarity=0.242 Sum_probs=204.1
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+|++.+.||.|+||.||++. ..+++.+++|.+...... ....+.+|++++++++||||+++++++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 36788899999999999998 456899999998754432 245788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--C
Q 012608 104 MPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--~ 179 (460)
++|++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~-i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK-ILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC-cccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 9999999988642 1356889999999999999999999999 999999999999999999999999998765443 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...++..|++||.+.+..++.++|+||||+++++|++|+.||............... .....+...+.++.+++.
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 234 (256)
T cd08530 160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-----KYPPIPPIYSQDLQNFIR 234 (256)
T ss_pred cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCchhhCHHHHHHHH
Confidence 345678999999998888999999999999999999999988655433222221111 111233456788999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.+|.+|||+.++++
T Consensus 235 ~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 235 SMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHcCCCcccCCCHHHHhc
Confidence 999999999999999987
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=276.44 Aligned_cols=243 Identities=19% Similarity=0.194 Sum_probs=196.9
Q ss_pred cccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 32 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
..||+|+|+.|--+. +.+|..+|||++.+.......+..+|++++.+. .|+||++++++|+++..+|+|||.|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 567999999999988 889999999999888766788999999999999 699999999999999999999999999999
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC---CeEEccCCCcccCCC---------
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRD--------- 177 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~DFg~a~~~~~--------- 177 (460)
..++. ....+++.++.++.++|+.||.+||.+| |.|||+||+|||..+.. -+|||||.+..-...
T Consensus 164 LshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kg-IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spast 240 (463)
T KOG0607|consen 164 LSHIQ--KRKHFNEREASRVVKDIASALDFLHTKG-IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAST 240 (463)
T ss_pred HHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcC-cccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCC
Confidence 99997 4567999999999999999999999999 99999999999996554 489999998753321
Q ss_pred --CCCccCCCcccCccccc---c--CCCCCCCceehHHHHHHHHhhCCCCCCChhhhh--h---------hhcccccccc
Q 012608 178 --GKSYSTNLAFTPPEYLR---T--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL--I---------RDRNLQMLTD 239 (460)
Q Consensus 178 --~~~~~~t~~y~aPE~~~---~--~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~--~---------~~~~~~~~~~ 239 (460)
..+..|+..|||||+.. + ..|+.++|.||||+|+|-|++|.+||.+..... | .+..+..+.+
T Consensus 241 P~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQE 320 (463)
T KOG0607|consen 241 PELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE 320 (463)
T ss_pred ccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhc
Confidence 12446778899999862 2 237889999999999999999999997652211 0 0111111111
Q ss_pred c--cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 S--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 ~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. ..+..-...++.+..++++.+|..++.+|-++.+++.
T Consensus 321 GkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 321 GKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 1 1111222357889999999999999999999888876
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=279.51 Aligned_cols=259 Identities=16% Similarity=0.244 Sum_probs=198.1
Q ss_pred cccchhcccCCCCCCeEEEEEE-cC----CcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEee-CCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-EN----QRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCE-GDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~ 97 (460)
..|++++.||+|.||.||+|.- .+ .+.+|||+++.....+ .....+|+.+++.++||||+.+..++.. +..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 3589999999999999999962 22 2378999998764332 4567899999999999999999999876 7889
Q ss_pred EEEEEcCCCCCHHhhhhccC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC----CCeEEccCC
Q 012608 98 LLVAEYMPNETLAKHLFHWE---THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED----GNPRLSTFG 170 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~----~~~kl~DFg 170 (460)
++++||.+ -+|...++.++ ...++...+.+|+.||+.|+.|||++- |+||||||.|||+..+ |++||+|||
T Consensus 104 ~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW-vlHRDLKPaNIlvmgdgperG~VKIaDlG 181 (438)
T KOG0666|consen 104 WLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW-VLHRDLKPANILVMGDGPERGRVKIADLG 181 (438)
T ss_pred EEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh-eeeccCCcceEEEeccCCccCeeEeeccc
Confidence 99999998 68888887543 356888999999999999999999999 9999999999999766 999999999
Q ss_pred CcccCCCC-------CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh---------cc
Q 012608 171 LMKNSRDG-------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---------RN 233 (460)
Q Consensus 171 ~a~~~~~~-------~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~---------~~ 233 (460)
+++.+... ...+.|+.|+|||.+.+.. ||++.|||+.||++.||+|-.+.|.+.-...-.. +.
T Consensus 182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI 261 (438)
T KOG0666|consen 182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI 261 (438)
T ss_pred HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence 99977643 2345689999999998865 8999999999999999999887765431111000 00
Q ss_pred ccccc--------------------cccccCCCC-----------chhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 234 LQMLT--------------------DSCLEGQFT-----------DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 234 ~~~~~--------------------~~~~~~~~~-----------~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+..+. ......... ..-++...+++.+||+.||..|.|+++.++ ...
T Consensus 262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle--h~y 339 (438)
T KOG0666|consen 262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE--HPY 339 (438)
T ss_pred HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc--ccc
Confidence 00000 000000000 011344788999999999999999999988 444
Q ss_pred cccCCC
Q 012608 283 QKETEV 288 (460)
Q Consensus 283 ~~~~~~ 288 (460)
+.....
T Consensus 340 F~~d~l 345 (438)
T KOG0666|consen 340 FTEDPL 345 (438)
T ss_pred cccCCC
Confidence 444333
|
|
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=285.89 Aligned_cols=239 Identities=20% Similarity=0.207 Sum_probs=189.2
Q ss_pred ccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHH---HHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 33 EHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEAR---SVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~---~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.||+|+||.||++.. .+|+.||+|.+....... ...+..|.. +++...||+|+.+++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 379999999999984 568999999986543221 222344443 4445579999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--CCccC
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--KSYST 183 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--~~~~~ 183 (460)
|++|.+++. ..+.+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++...... ....|
T Consensus 81 g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (278)
T cd05606 81 GGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (278)
T ss_pred CCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence 999998886 3457999999999999999999999999 999999999999999999999999998754332 34568
Q ss_pred CCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 184 NLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 184 t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
+..|+|||.+.++ .++.++||||+|+++|+|++|..||............ .. ........+...+..+.+++.+||
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~-~~--~~~~~~~~~~~~s~~~~~li~~~l 234 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-RM--TLTMAVELPDSFSPELRSLLEGLL 234 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH-HH--hhccCCCCCCcCCHHHHHHHHHHh
Confidence 8999999998754 5889999999999999999999988654211110000 00 001122344556789999999999
Q ss_pred ccCCCCCC-----ChhHHHH
Q 012608 263 QYEPRERP-----NPKSLVT 277 (460)
Q Consensus 263 ~~~p~~Rp-----s~~~il~ 277 (460)
..+|.+|| ++.++++
T Consensus 235 ~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 235 QRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred hcCHHhccCCCCCCHHHHHh
Confidence 99999999 8889986
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=298.20 Aligned_cols=248 Identities=17% Similarity=0.254 Sum_probs=195.9
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeC-----CeeE
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 98 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 98 (460)
.|.+++.||.|+||+||++. ..+|+.||||.++... ......+.+|+.+++.++||||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 47788899999999999999 4569999999987542 22345678899999999999999999987644 3479
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+++||+. ++|.+++. ..+.+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 86 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~-i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 86 IVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSAN-VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 9999996 78988886 3467999999999999999999999999 999999999999999999999999998765433
Q ss_pred ----CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh-------------------ccc
Q 012608 179 ----KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------------------RNL 234 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~-------------------~~~ 234 (460)
....++..|+|||.+.. ..++.++|||||||++|+|++|+.||.......... ...
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 23457889999998865 458899999999999999999998886532110000 000
Q ss_pred ----ccccc--ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 235 ----QMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 235 ----~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
..... ........+.+++++.+++.+||+.+|.+|||+.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000 000011223567889999999999999999999999983
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=293.83 Aligned_cols=245 Identities=20% Similarity=0.225 Sum_probs=188.7
Q ss_pred hhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 30 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
+.+.+|.| |.||.++ ..+|+.||||+++... ....+.+.+|+.++++++||||+++++++...+..+++|||+++
T Consensus 6 i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 6 IGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 33444444 4555555 3379999999987652 23456899999999999999999999999999999999999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--------
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------- 178 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-------- 178 (460)
++|.+++.......+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||.+......
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~-ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 84 GSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG-FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 99999987655567899999999999999999999999 999999999999999999999999987643221
Q ss_pred ---CCccCCCcccCccccccC--CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh-hccc---cc-------------
Q 012608 179 ---KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-DRNL---QM------------- 236 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~--~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~-~~~~---~~------------- 236 (460)
....++..|+|||.+... .++.++|+|||||++|+|++|..||......... .... ..
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCC
Confidence 223456789999998653 4788999999999999999999988643211100 0000 00
Q ss_pred -----------cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 -----------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 -----------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.............++.++.+++.+||+.||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00000111122345678999999999999999999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=291.85 Aligned_cols=247 Identities=21% Similarity=0.308 Sum_probs=198.9
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
|++++.||.|++|.||++.. .+|+.+++|.++..... ....+.+|++++++++||||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 56788999999999999985 46899999998765433 3567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----~ 180 (460)
+ ++|.+++.. ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 81 ~-~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 D-TDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHG-ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred C-CCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCC-eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 8 588887764 2357899999999999999999999999 9999999999999999999999999887655432 3
Q ss_pred ccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-----------cccc---------
Q 012608 181 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------MLTD--------- 239 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-----------~~~~--------- 239 (460)
..++..|+|||.+.+. ..+.++|+||||+++|+|+||+.||+............. ....
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 4567889999998776 688999999999999999999988865432111000000 0000
Q ss_pred ----ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 ----SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 ----~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
........+.++.++.++|.+||+.||.+||++.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00001122346788999999999999999999999986
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=297.40 Aligned_cols=248 Identities=17% Similarity=0.274 Sum_probs=195.1
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEee----CCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~ 98 (460)
..|++.+.||.|+||.||++. ..+|+.||+|++..... .....+.+|+.++++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 356778889999999999999 45699999999875432 235678889999999999999999998753 34689
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.+ ++||||||+||++++++.+||+|||++......
T Consensus 85 lv~e~~~-~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 85 VVMDLME-SDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSAN-VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEehhh-hhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999996 689888853 456999999999999999999999999 999999999999999999999999998754322
Q ss_pred --------CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh------------------
Q 012608 179 --------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD------------------ 231 (460)
Q Consensus 179 --------~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~------------------ 231 (460)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..........
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 240 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIG 240 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhc
Confidence 13457889999999865 457899999999999999999999886542211000
Q ss_pred -cc----ccccc--cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 232 -RN----LQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 232 -~~----~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.. ..... .........+..+.++.+++.+||+.+|.+|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00 00000 000001112345788999999999999999999999988
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=291.88 Aligned_cols=251 Identities=19% Similarity=0.245 Sum_probs=192.2
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCC-----
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD----- 95 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 95 (460)
....|++++.||+|+||.||++.. .+++.||||.+...... ....+.+|+.++++++||||+++++++...+
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 445788999999999999999995 46999999988654322 2345678999999999999999999986543
Q ss_pred ---eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCc
Q 012608 96 ---ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 172 (460)
Q Consensus 96 ---~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a 172 (460)
..++||||+. ++|.+.+.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNK-ILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEECCCCcEEECcCCCc
Confidence 3599999997 588887753 2346899999999999999999999999 999999999999999999999999998
Q ss_pred ccCCCCC--------CccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc---ccccc---
Q 012608 173 KNSRDGK--------SYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR---NLQML--- 237 (460)
Q Consensus 173 ~~~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~---~~~~~--- 237 (460)
....... ...++..|+|||.+.+.. ++.++||||||+++|+|+||..||........... .....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 7553321 234578899999886543 68899999999999999999988765432111000 00000
Q ss_pred ----------------cccc---ccCC-CCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 ----------------TDSC---LEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 ----------------~~~~---~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.... .... .+...+..+.++|.+||..||.+|||+.++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000 0000 01112457789999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=290.26 Aligned_cols=245 Identities=18% Similarity=0.254 Sum_probs=195.9
Q ss_pred cchhcccCCCCCCeEEEEEE----cCCcEEEEEEecCCCC----CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeE
Q 012608 28 ENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (460)
|++.+.||.|+||.||.+.. .+|+.||+|+++.... ...+.+.+|+.+++++ +|+||+.+++++..++..+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 67889999999999999985 3689999999875322 2246788999999999 6999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++|++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999864 456889999999999999999999999 999999999999999999999999998765432
Q ss_pred -----CCccCCCcccCccccccC--CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 179 -----KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~--~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
....++..|+|||.+.+. ..+.++||||||+++|+|++|..|+................... ...++..++
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--EPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--CCCCCccCC
Confidence 234578899999998753 36789999999999999999998875321110000000000000 112345577
Q ss_pred HHHHHHHHHHcccCCCCCC-----ChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rp-----s~~~il~ 277 (460)
+.+.+++.+||+.+|++|| ++.+++.
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 8999999999999999997 6666665
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=295.74 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=193.6
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC--CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeC--CeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG--DERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~--~~~~l 99 (460)
.+|.+.+.||.|+||.||+|... +|+.+|+|++.... ......+.+|+.+++++ +||||+++++++... ...++
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 35778889999999999999954 68999999885432 22345677899999999 999999999998653 36899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||++ ++|.+++.. +.+++..+..++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 87 VFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGN-VIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred Eecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 999997 599888853 37889999999999999999999999 999999999999999999999999988754332
Q ss_pred --------CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc----------------
Q 012608 179 --------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------- 233 (460)
Q Consensus 179 --------~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~---------------- 233 (460)
....++..|+|||.+.+ ...+.++||||||+++|+|+||+.||............
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence 12457889999998865 45788999999999999999999888643221110000
Q ss_pred -------ccccc--cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 -------LQMLT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 -------~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..... .........+.++.++.+++.+||+.+|.+|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 00000 000011122336788999999999999999999999997
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=303.89 Aligned_cols=240 Identities=17% Similarity=0.220 Sum_probs=194.6
Q ss_pred hhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC----CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCe--eEEEEE
Q 012608 30 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM----AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE--RLLVAE 102 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~lv~e 102 (460)
.-.+||+|+|-+||+|.+ .+|..||--.++.. .....++|..|+.+|+.|+||||++++.++..... +.+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 345689999999999994 45888875433321 12235789999999999999999999999976654 779999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEc-CCCCeEEccCCCcccCCCC--
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~-~~~~~kl~DFg~a~~~~~~-- 178 (460)
.+..|||..+.++ .+.++...+..|++||++||.|||++. ||||||||.+||+|+ ..|.|||+|+|+|......
T Consensus 124 L~TSGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a 201 (632)
T KOG0584|consen 124 LFTSGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA 201 (632)
T ss_pred cccCCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccc
Confidence 9999999999984 456888899999999999999999986 699999999999997 4599999999999876543
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh-hhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....|||.|||||++. ..|+...||||||+.++||+|+..|+...... .++.+...... +..+...-.+++++|
T Consensus 202 ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiK----P~sl~kV~dPevr~f 276 (632)
T KOG0584|consen 202 KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIK----PAALSKVKDPEVREF 276 (632)
T ss_pred ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCC----HHHhhccCCHHHHHH
Confidence 5678999999999987 78999999999999999999999988654221 22222222222 222233335799999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
|.+||.. .++|+|+.++|+
T Consensus 277 IekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 277 IEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHhcC-chhccCHHHHhh
Confidence 9999999 999999999997
|
|
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-37 Score=287.39 Aligned_cols=248 Identities=20% Similarity=0.245 Sum_probs=195.2
Q ss_pred cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcC---CCCccceeeeEEeeCCe-----
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQL---RNNRLTNLLGCCCEGDE----- 96 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~h~~iv~~~~~~~~~~~----- 96 (460)
|++++.||.|+||.||+|... +++.||+|+++...... ...+.+|+.+++++ .||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567888999999999999965 58999999997543322 34566788877766 59999999999987766
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.+++|||++ ++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~-i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR-IVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 899999997 58988886544446899999999999999999999999 9999999999999999999999999987654
Q ss_pred CCC---CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc----------------
Q 012608 177 DGK---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML---------------- 237 (460)
Q Consensus 177 ~~~---~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---------------- 237 (460)
... ...++..|+|||.+.+..++.++|+|||||++|+|++|..||................
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 332 3346788999999988889999999999999999999998876543221111100000
Q ss_pred ---cc--ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 ---TD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 ---~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.. ........+..+..+.+++.+||+.||.+||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00 00001112245678899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=290.76 Aligned_cols=251 Identities=18% Similarity=0.242 Sum_probs=199.5
Q ss_pred ccchhcccCCCCCCeEEEEEE----cCCcEEEEEEecCCCC----CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 27 VENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
+|++.+.||.|++|.||++.. .+++.||||.++.... ...+.+.+|+.++.++ +||||+++++.+..++..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367888999999999999873 3578899999864321 2245688999999999 699999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||++|++|.+.+.. ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~-~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLG-IIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 999999999999998863 456889999999999999999999999 99999999999999999999999998875433
Q ss_pred CC-----CccCCCcccCccccccCC--CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 178 GK-----SYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 178 ~~-----~~~~t~~y~aPE~~~~~~--~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
.. ...++..|++||.+.+.. .+.++|+||||+++++|++|..||................... ....+..+
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 235 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTM 235 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCccc
Confidence 21 235788999999987655 6889999999999999999998875321110000000000000 11234456
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
+..+.+++.+||+.+|++|||+.++.+.|+..
T Consensus 236 ~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 236 SAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred CHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 78899999999999999999988887766543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=289.60 Aligned_cols=242 Identities=21% Similarity=0.256 Sum_probs=201.9
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+|.+.+.||.|+||.||++.. .+|+.|++|++..... ...+.+.+|+.++++++ ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 578889999999999999995 4799999999865322 22457889999999998 999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC--
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-- 179 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-- 179 (460)
|++++++|.+++.. .+.+++..++.++.|++.||.+||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~-~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKG-IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999974 447999999999999999999999999 9999999999999999999999999887544321
Q ss_pred ----------------------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc
Q 012608 180 ----------------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 237 (460)
Q Consensus 180 ----------------------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 237 (460)
...++..|+|||.+.+...+.++|+||||++++++++|..|+.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--- 235 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL--- 235 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH---
Confidence 2345788999999988888999999999999999999998886543222111111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHcccCCCCCCCh----hHHHH
Q 012608 238 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP----KSLVT 277 (460)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~----~~il~ 277 (460)
.....++...++.+.+++.+||+.+|.+|||+ +++++
T Consensus 236 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 ---KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11123445567899999999999999999999 77765
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=288.73 Aligned_cols=248 Identities=18% Similarity=0.299 Sum_probs=196.1
Q ss_pred cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
|++.+.||.|++|+||+|... +++.|+||++...... +.....+|+..+++++ ||||+++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999964 5889999998654332 2334567999999998 999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CCc
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSY 181 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~~ 181 (460)
+++|.+.+.......+++..+..++.|++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++...... ...
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~-i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG-FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 689998887544457899999999999999999999999 999999999999999999999999998765443 234
Q ss_pred cCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc---------------------cccccc
Q 012608 182 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------------LQMLTD 239 (460)
Q Consensus 182 ~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~---------------------~~~~~~ 239 (460)
.++..|+|||.+.+ ..++.++|+||||+++++|++|+.||+........... ......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 57889999998854 44788999999999999999999888654321110000 000000
Q ss_pred c---cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 S---CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 ~---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. .......+..+.++.+++++||+.+|.+|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0 0000111223578999999999999999999999976
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=296.64 Aligned_cols=247 Identities=17% Similarity=0.205 Sum_probs=193.5
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeC----------
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG---------- 94 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---------- 94 (460)
.+|.+++.||.|+||.||+|.. .+|+.||+|++........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 4688899999999999999994 56999999998776655667899999999999999999999876543
Q ss_pred ----CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc-CCCCeEEccC
Q 012608 95 ----DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTF 169 (460)
Q Consensus 95 ----~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~DF 169 (460)
...++||||++ ++|.+.+. .+.+++..++.++.||+.||.|||+.+ ++||||||+||+++ +++.++|+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCceEEECCc
Confidence 35789999997 68988774 456899999999999999999999999 99999999999997 4567899999
Q ss_pred CCcccCCCC-------CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc------
Q 012608 170 GLMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------ 235 (460)
Q Consensus 170 g~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------ 235 (460)
|++...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..............
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 998754322 12346788999998754 4578899999999999999999998864321110000000
Q ss_pred ------------------ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 ------------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ------------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
............+..+.++.+++.+||+.||.+|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000000001112346678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=288.11 Aligned_cols=249 Identities=20% Similarity=0.287 Sum_probs=195.8
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 99 (460)
.++.+|++.+.||.|+||.||+|... +++.||||.++..... ....+..|+.++.+. .||||+++++++..+...++
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 45577899999999999999999965 4999999999764432 245677788777777 59999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+|||++ ++|.+++.. ....+++..+..++.|++.||.|||+. + ++||||+|+||++++++.++|+|||++......
T Consensus 92 v~e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 92 CMELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHG-VIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred EeeccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCC-EecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 999996 577776654 235789999999999999999999984 7 999999999999999999999999998765432
Q ss_pred C---CccCCCcccCccccccCC----CCCCCceehHHHHHHHHhhCCCCCCChhhh-hhhhccccccccccccCCCCchh
Q 012608 179 K---SYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 179 ~---~~~~t~~y~aPE~~~~~~----~~~~sDi~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
. ...++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...... .......... .........+
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 245 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE---PPSLPPNEGF 245 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC---CCCCCCCCCC
Confidence 2 234678899999987543 788999999999999999999988652111 0111111110 0000111235
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.++.+++.+||..+|.+||++.+++.
T Consensus 246 ~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 246 SPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 688999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=277.52 Aligned_cols=245 Identities=18% Similarity=0.232 Sum_probs=193.9
Q ss_pred hhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 30 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
=++.||.|+||+|++.. ..+|+..|||.+..... .+..+++.|.+...+- +.||||+++|.+..++..|+.||+|+
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 36789999999999998 45799999999987665 3466888898876666 79999999999999999999999997
Q ss_pred CCHHhhhhc---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CC
Q 012608 107 ETLAKHLFH---WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KS 180 (460)
Q Consensus 107 ~sL~~~~~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~ 180 (460)
.||..+... -....+++.-+-.|....+.||.||-..-+||||||||+|||++..|.+||||||++.....+ +.
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~ 226 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV 226 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence 788765432 234578899899999999999999998766999999999999999999999999998765543 23
Q ss_pred ccCCCcccCcccccc--CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC---chhHHHHH
Q 012608 181 YSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT---DDDGTELV 255 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 255 (460)
-.|-..|||||.+.. ..++.+|||||||++++|+.||..|+..... ..+...+......+.-..+ -..+..+.
T Consensus 227 daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~ 304 (361)
T KOG1006|consen 227 DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLFDKECVHYSFSMV 304 (361)
T ss_pred ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecCcccccccCHHHH
Confidence 357788999999853 3488999999999999999999987765432 2111111111111111122 23678899
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+|..||.+|-..||.+.++++
T Consensus 305 ~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 305 RFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred HHHHHHhhcccccCcchhhhhc
Confidence 9999999999999999999987
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=291.65 Aligned_cols=246 Identities=18% Similarity=0.275 Sum_probs=194.4
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEee-CCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 102 (460)
.|++++.||.|+||.||++. ..+|+.||+|++..... ...+.+.+|+.++++++||||+++++++.. ++..++++|
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE 90 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence 46778889999999999998 45799999998764322 235678899999999999999999999865 457889999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-CCc
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 181 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~~ 181 (460)
|+ +++|.+++. ..++++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++...... ...
T Consensus 91 ~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~-iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 165 (328)
T cd07856 91 LL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAG-VVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY 165 (328)
T ss_pred hh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence 99 478988874 456888889999999999999999999 999999999999999999999999998765433 344
Q ss_pred cCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh---------------hhcc--------cccc
Q 012608 182 STNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---------------RDRN--------LQML 237 (460)
Q Consensus 182 ~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~---------------~~~~--------~~~~ 237 (460)
.++..|+|||.+.+ ..++.++||||||+++++|+||+.||........ .... ....
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (328)
T cd07856 166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL 245 (328)
T ss_pred cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence 57889999998865 4588999999999999999999988865422100 0000 0000
Q ss_pred c--cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 T--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 ~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. ...+.....+.++..+.++|.+||+.+|++|||+.+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 000111122345688999999999999999999999987
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=289.05 Aligned_cols=243 Identities=19% Similarity=0.243 Sum_probs=202.4
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
+.|..| +.||+|+||.||-.+ ..+|+-+|.|++...... ...-.+.|-++|.+++.+.||.+--.|+..+.++
T Consensus 185 n~F~~~---RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 185 NTFRVY---RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred cceeee---EEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 445555 555999999999998 567999999988543321 2345778999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+|+..|.||+|.-+|....+..+++..+.-++.+|+.||++||..+ ||.||+||+|||+|+.|.++|+|+|+|..+...
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~-iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR-IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc-eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 9999999999998887767778999999999999999999999999 999999999999999999999999999987765
Q ss_pred C---CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc-cccccccccccCCCCchhHHHH
Q 012608 179 K---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR-NLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 179 ~---~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 254 (460)
. ...||.+|||||++..+.|+...|.|||||+||||+.|+.||.......-... ....+. -..+++..++++.
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~---~~~ey~~kFS~ea 417 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE---DPEEYSDKFSEEA 417 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc---chhhcccccCHHH
Confidence 4 34789999999999999999999999999999999999999865432211111 111111 1235678889999
Q ss_pred HHHHHHHcccCCCCCCCh
Q 012608 255 VRLASRCLQYEPRERPNP 272 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~ 272 (460)
.+|.+.+|+.||++|.-.
T Consensus 418 kslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 418 KSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred HHHHHHHHccCHHHhccC
Confidence 999999999999999543
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=289.38 Aligned_cols=250 Identities=21% Similarity=0.236 Sum_probs=193.8
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCC------
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ 95 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 95 (460)
...|++.+.||.|+||.||+|... +|+.||+|+++.... .....+.+|++++++++||||+++++++....
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 346778889999999999999954 589999999875432 22456788999999999999999999987654
Q ss_pred ----eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 96 ----ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 96 ----~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
..++|+||+++ ++.+.+.. ....+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||+
T Consensus 86 ~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 86 KDKGAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKN-FLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred ccCCcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCcEEeCcccc
Confidence 78999999985 77776653 2346899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCC-----CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc-----------c
Q 012608 172 MKNSRDGK-----SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------L 234 (460)
Q Consensus 172 a~~~~~~~-----~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~ 234 (460)
+....... ...++..|+|||.+.+. ..+.++|||||||++++|++|+.||............ .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (302)
T cd07864 163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242 (302)
T ss_pred cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 87654322 12346789999988653 4688999999999999999999888643221100000 0
Q ss_pred ccccccc-------------ccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 QMLTDSC-------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 ~~~~~~~-------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+.... ........++..+.+++.+||+.+|.+|||+.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000000 000112235788999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=276.48 Aligned_cols=238 Identities=20% Similarity=0.234 Sum_probs=204.7
Q ss_pred CCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
-..++..++.||+|.||.|-+++ ..+|+.+|+|+++....-. ...-+.|-++|+..+||.+..+.-.|...+.+|+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 34556778899999999999999 6679999999998765333 4457789999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC----
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS---- 175 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~---- 175 (460)
||||..||.|.-++.+ ...++++..+-+...|+.||.|||+++ ||.||+|.+|.|+|.+|.+||.|||+++.-
T Consensus 246 VMeyanGGeLf~HLsr--er~FsE~RtRFYGaEIvsAL~YLHs~~-ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSR--ERVFSEDRTRFYGAEIVSALGYLHSRN-IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred EEEEccCceEeeehhh--hhcccchhhhhhhHHHHHHhhhhhhCC-eeeeechhhhheeccCCceEeeecccchhccccc
Confidence 9999999999888863 467999999999999999999999999 999999999999999999999999998742
Q ss_pred CCCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 176 RDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 176 ~~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....+++||+.|+|||++.+..|+.+.|.|.+|+|+|||++|+.||.....+.+-.-.... .-.+|..++++..
T Consensus 323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e------d~kFPr~ls~eAk 396 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME------DLKFPRTLSPEAK 396 (516)
T ss_pred ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh------hccCCccCCHHHH
Confidence 2346889999999999999999999999999999999999999999765443332222111 1246778889999
Q ss_pred HHHHHHcccCCCCCC
Q 012608 256 RLASRCLQYEPRERP 270 (460)
Q Consensus 256 ~li~~~l~~~p~~Rp 270 (460)
.++..+|..||.+|.
T Consensus 397 tLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 397 TLLSGLLKKDPKKRL 411 (516)
T ss_pred HHHHHHhhcChHhhc
Confidence 999999999999994
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=300.70 Aligned_cols=197 Identities=24% Similarity=0.298 Sum_probs=171.5
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCC------eeE
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ERL 98 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~~ 98 (460)
.+..-+.||.|+||.||+|+ ..+|+.||||.++.... ...+...+|+++|++|+|||||+++++-+... ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 45667889999999999999 67899999999976543 34678889999999999999999999855433 468
Q ss_pred EEEEcCCCCCHHhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc--CCCC--eEEccCCCcc
Q 012608 99 LVAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGN--PRLSTFGLMK 173 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~--~~~~--~kl~DFg~a~ 173 (460)
+|||||.||+|+..+.+..+ ..+++.+.+.++..++.||.|||.+| |+||||||.||++- ++|+ .||+|||.|+
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~-IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG-IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 99999999999999986543 57999999999999999999999999 99999999999983 4454 6999999999
Q ss_pred cCCCC---CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCCh
Q 012608 174 NSRDG---KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSH 224 (460)
Q Consensus 174 ~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~ 224 (460)
...+. .+..||..|.+||.+.. +.++..+|.|||||++|+.+||..||-..
T Consensus 173 el~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 173 ELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred cCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 87765 46789999999999984 77899999999999999999999998543
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-37 Score=294.79 Aligned_cols=247 Identities=17% Similarity=0.218 Sum_probs=195.8
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCC------e
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~ 96 (460)
..|++++.||.|+||.||++. ..+|+.||||++....... ...+.+|+.++++++||||+++++++..+. .
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence 458889999999999999998 5579999999986543222 456889999999999999999999986543 3
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.++||||+ |++|.+++. ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~g-i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 95 FYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 58999999 689988874 457899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC-CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc--------------------
Q 012608 177 DG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------------- 234 (460)
Q Consensus 177 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------------------- 234 (460)
.. ....++..|++||.+.+ ..++.++|+||||++++++++|..||.............
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07880 170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAK 249 (343)
T ss_pred cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHH
Confidence 43 23467889999999875 347889999999999999999998886442211100000
Q ss_pred ---cccccc--cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 ---QMLTDS--CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 ---~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+... .......+.+++.+.+++.+||..||++|||+.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 0001122356678999999999999999999999986
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-37 Score=294.74 Aligned_cols=257 Identities=18% Similarity=0.251 Sum_probs=199.9
Q ss_pred HHHHHHhc-CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEE
Q 012608 16 EQLKNATS-GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCC 91 (460)
Q Consensus 16 ~~~~~~~~-~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 91 (460)
+|..+.+. -..+|++++.||.|++|.||+|.. .+++.||+|++..... .....+.+|+.++++++||||+++++++
T Consensus 4 ~~~~~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 83 (343)
T cd07851 4 QELNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVF 83 (343)
T ss_pred hhhccceecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHh
Confidence 34444443 344688999999999999999995 4689999999865322 2245678899999999999999999987
Q ss_pred eeCCe------eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeE
Q 012608 92 CEGDE------RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 165 (460)
Q Consensus 92 ~~~~~------~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~k 165 (460)
...+. .++|+||+ |++|.+++. ...+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g-i~H~dlkp~Nill~~~~~~k 158 (343)
T cd07851 84 TPASSLEDFQDVYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAG-IIHRDLKPSNIAVNEDCELK 158 (343)
T ss_pred hccccccccccEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEECCCCCEE
Confidence 65544 89999999 579999885 357999999999999999999999999 99999999999999999999
Q ss_pred EccCCCcccCCCC-CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc-----
Q 012608 166 LSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT----- 238 (460)
Q Consensus 166 l~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~----- 238 (460)
|+|||++...... ....++..|+|||.+.+. .++.++|||||||++|++++|+.||.................
T Consensus 159 L~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 238 (343)
T cd07851 159 ILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238 (343)
T ss_pred EccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Confidence 9999998765433 345678889999998653 578899999999999999999998865432211111000000
Q ss_pred --------------c---cccc---CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 --------------D---SCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 --------------~---~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. .... .......+..+.+++.+||..+|++|||+.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0 0000 0111234688999999999999999999999987
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=292.47 Aligned_cols=247 Identities=19% Similarity=0.210 Sum_probs=193.3
Q ss_pred ccch-hcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--------------HHHHHHHHHHHhcCCCCccceeeeE
Q 012608 27 VENI-VSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--------------PRQFLEEARSVGQLRNNRLTNLLGC 90 (460)
Q Consensus 27 ~~~i-~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~~iv~~~~~ 90 (460)
.|.. .+.||.|+||+||+|.. .+|+.||||+++...... ...+.+|++++++++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 4544 36699999999999994 469999999986543221 1257799999999999999999999
Q ss_pred EeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCC
Q 012608 91 CCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 170 (460)
Q Consensus 91 ~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg 170 (460)
+..++..++||||++ ++|.+++.. ...+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~-i~H~dl~~~nill~~~~~~kl~dfg 164 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWY-FMHRDLSPANIFINSKGICKIADFG 164 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHeEECCCCCEEECCcc
Confidence 999999999999997 689888863 456899999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------------------CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh
Q 012608 171 LMKNSRDG------------------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD 231 (460)
Q Consensus 171 ~a~~~~~~------------------~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~ 231 (460)
++...... ....++..|+|||.+.+.. ++.++|+|||||++++|++|..||..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 244 (335)
T PTZ00024 165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG 244 (335)
T ss_pred ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 88755410 1223567899999987644 6889999999999999999998886543221111
Q ss_pred ccccccc---c-------------------ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 232 RNLQMLT---D-------------------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 232 ~~~~~~~---~-------------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
....... . +..........+.++.+++.+||+.+|++|||+.+++.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 0000000 0 00000112345678999999999999999999999997
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=281.43 Aligned_cols=244 Identities=16% Similarity=0.208 Sum_probs=197.1
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC-----CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-----WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.|.+.+.||.|+||.||++... .+..+++|.++... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 3678899999999999999853 35556666665422 12244677899999999999999999999988899999
Q ss_pred EEcCCCCCHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 101 AEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||+++++|.+++.. .....+++..++.++.|++.||.|||+.+ ++|+||+|+||++++ +.++|+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR-ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC-ccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 999999999988753 23457899999999999999999999999 999999999999975 56999999988765332
Q ss_pred ----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 179 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
....++..|+|||.+.+..++.++|+||||+++++|++|..|+.............. ......+..++.++
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 233 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-----GPTPSLPETYSRQL 233 (260)
T ss_pred cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-----CCCCCCcchhcHHH
Confidence 234578899999999877889999999999999999999998865433222222111 11223345677899
Q ss_pred HHHHHHHcccCCCCCCChhHHHH
Q 012608 255 VRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+++.+||+.+|++||++.++++
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 234 NSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHHHHHHhcCChhhCcCHHHHhh
Confidence 99999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=289.07 Aligned_cols=250 Identities=20% Similarity=0.260 Sum_probs=191.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeC-------
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG------- 94 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 94 (460)
..+|++++.||.|+||.||+|.. .+++.||+|++......+ ...+.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 56788999999999999999994 468999999986543222 34678899999999999999999987543
Q ss_pred -CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 95 -DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 95 -~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
...++||||+. ++|.+.+.. ....+++..+..++.|++.||.|||+++ ++|+||||+||++++++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~-i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENH-ILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEECcCccch
Confidence 34699999997 567776653 3457999999999999999999999999 9999999999999999999999999887
Q ss_pred cCCCCC---------------CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc---
Q 012608 174 NSRDGK---------------SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--- 234 (460)
Q Consensus 174 ~~~~~~---------------~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~--- 234 (460)
...... ...+++.|+|||.+.+. .++.++|||||||++|+|++|+.||.+...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 543221 12346789999988654 47889999999999999999998876443221111000
Q ss_pred --------------cccccccccCCC-------CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 --------------QMLTDSCLEGQF-------TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 --------------~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
............ ....++.+.+++.+||+.+|.+|||+.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 000000000000 1223467899999999999999999999876
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=290.86 Aligned_cols=257 Identities=17% Similarity=0.223 Sum_probs=197.7
Q ss_pred cCHHHHHHHhcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeee
Q 012608 13 FTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLG 89 (460)
Q Consensus 13 ~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~ 89 (460)
....++..+++ .|.+++.||+|+||.||++. ..+|+.||+|+++..... ..+.+.+|+.++++++||||+++++
T Consensus 7 ~~~~~~~~~~~---~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~ 83 (345)
T cd07877 7 ELNKTIWEVPE---RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83 (345)
T ss_pred hHHHHHhhccC---ceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceee
Confidence 33444455554 46678889999999999998 457999999998754322 2457889999999999999999999
Q ss_pred EEeeC------CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC
Q 012608 90 CCCEG------DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 163 (460)
Q Consensus 90 ~~~~~------~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~ 163 (460)
++... +..+++++++ |++|.+++. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 84 VFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred eeeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChHHEEEcCCCC
Confidence 88643 3467888887 789988874 346899999999999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCC-CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc--------
Q 012608 164 PRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------- 233 (460)
Q Consensus 164 ~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~-------- 233 (460)
++|+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||............
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (345)
T cd07877 159 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 238 (345)
T ss_pred EEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 999999998765443 34567889999999866 45788999999999999999999888643221110000
Q ss_pred ---ccccc-----------ccccc---CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 ---LQMLT-----------DSCLE---GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 ---~~~~~-----------~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..... ...+. .......++++.++|.+||+.||.+||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 00000 00000 0111234678999999999999999999999987
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=277.97 Aligned_cols=235 Identities=23% Similarity=0.277 Sum_probs=196.5
Q ss_pred cCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 34 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 34 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
||.|+||.||++... +++.+++|.+...... ....+..|+.++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999954 5899999998765433 345789999999999999999999999999999999999999999
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CCccCCC
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNL 185 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~~~~t~ 185 (460)
.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~-~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSLG-IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999863 346899999999999999999999999 999999999999999999999999998765442 3456788
Q ss_pred cccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccC
Q 012608 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265 (460)
Q Consensus 186 ~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 265 (460)
.|++||.+.+...+.++|+||||+++|++++|..||.............. ....++...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK------DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999999888889999999999999999999998865433222222111 112344555789999999999999
Q ss_pred CCCCCCh---hHHHH
Q 012608 266 PRERPNP---KSLVT 277 (460)
Q Consensus 266 p~~Rps~---~~il~ 277 (460)
|++||++ .++++
T Consensus 232 p~~R~~~~~~~~l~~ 246 (250)
T cd05123 232 PTKRLGSGGAEEIKA 246 (250)
T ss_pred HhhCCCcccHHHHHh
Confidence 9999999 55544
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=283.13 Aligned_cols=246 Identities=23% Similarity=0.285 Sum_probs=197.3
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
|++.+.||+|++|.||+|+. .+++.|++|++.... ....+.+..|+.++++++|+||+++++++...+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 45678899999999999995 459999999987654 223567889999999999999999999999989999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----S 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----~ 180 (460)
+ ++|.+++... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||++....... .
T Consensus 81 ~-~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~-i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 81 D-MDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHR-ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred C-cCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 8 6999998642 247999999999999999999999999 9999999999999999999999999987654332 2
Q ss_pred ccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc------------------------cc
Q 012608 181 YSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN------------------------LQ 235 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~------------------------~~ 235 (460)
..++..|+|||.+.+. .++.++|||||||+++++++|..||............ ..
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 3446789999998766 6899999999999999999999888654322111000 00
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.... .......+..+..+.+++.+||..+|++||++.+++.
T Consensus 238 ~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 238 KFPP-KDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccCc-cchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000 0000111234678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-36 Score=287.40 Aligned_cols=246 Identities=18% Similarity=0.243 Sum_probs=190.7
Q ss_pred cchhcccCCCCCCeEEEEEE-cC--CcEEEEEEecCCCCC--CHHHHHHHHHHHhcC-CCCccceeeeEEeeC----Cee
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-EN--QRRIAVKRFNRMAWP--DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG----DER 97 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~--~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~----~~~ 97 (460)
|++.+.||+|+||.||++.. .+ +..||+|++...... ..+.+.+|+.+++++ +||||+++++++... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 67788999999999999994 34 789999998653222 245788999999999 699999999875432 457
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++++|++. ++|.+.+. ....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSAN-VLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 88999996 78988885 3567899999999999999999999999 99999999999999999999999999875432
Q ss_pred C--------CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-----------c-
Q 012608 178 G--------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-----------M- 236 (460)
Q Consensus 178 ~--------~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-----------~- 236 (460)
. ....++..|+|||.+.+ ..++.++|+||||+++++|++|..||.............. .
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 23467889999998765 4578999999999999999999988764321110000000 0
Q ss_pred -------------cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 -------------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 -------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...........+..+..+.+++.+||+.+|.+|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000001112234678999999999999999999999986
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=260.79 Aligned_cols=267 Identities=19% Similarity=0.257 Sum_probs=217.9
Q ss_pred CCCCCCCCccccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC
Q 012608 2 SEVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR 80 (460)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 80 (460)
++|+...+-..|+++...-.+++-++|++++++|+|.|+.||.|. ..++++++||+++.-. .+.+.+|+.+|+.|.
T Consensus 14 a~vn~~rp~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~ 90 (338)
T KOG0668|consen 14 ADVNEERPREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLR 90 (338)
T ss_pred hhccccCchhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhcc
Confidence 678888889999999999999999999999999999999999998 6678999999997644 578999999999995
Q ss_pred -CCccceeeeEEeeC--CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEE
Q 012608 81 -NNRLTNLLGCCCEG--DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 157 (460)
Q Consensus 81 -h~~iv~~~~~~~~~--~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nil 157 (460)
||||+.++++..+. ..+.+|+||+.+.+...+. ..++.-.+..++.+++.||.||||.| |.|||+||.|++
T Consensus 91 gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~G-ImHRDVKPhNvm 164 (338)
T KOG0668|consen 91 GGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSMG-IMHRDVKPHNVM 164 (338)
T ss_pred CCCCeeehhhhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhcC-cccccCCcceee
Confidence 99999999998654 4578999999988877665 35778889999999999999999999 999999999999
Q ss_pred EcCC-CCeEEccCCCcccCCCCCCc---cCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhh------
Q 012608 158 FDED-GNPRLSTFGLMKNSRDGKSY---STNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL------ 226 (460)
Q Consensus 158 l~~~-~~~kl~DFg~a~~~~~~~~~---~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~------ 226 (460)
||.. ..++|+|+|+|....+...+ ..+..|-.||.+-+- .++..-|+|||||++..|+..+.||.....
T Consensus 165 Idh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLV 244 (338)
T KOG0668|consen 165 IDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 244 (338)
T ss_pred echhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHH
Confidence 9955 56999999999987776554 457788999998764 478899999999999999999999843210
Q ss_pred --------hhh------------------hhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 227 --------DLI------------------RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 227 --------~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+ ...................-.+++..+++.++|..|-.+|+|++|...
T Consensus 245 kIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 245 KIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 000 001111111111222222234689999999999999999999999876
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=327.55 Aligned_cols=245 Identities=24% Similarity=0.400 Sum_probs=193.9
Q ss_pred hhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCC
Q 012608 30 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 108 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~s 108 (460)
....||+|+||.||+|.. .+|..||||+++..... ...|++++++++||||+++++++...+..++||||++||+
T Consensus 694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~ 769 (968)
T PLN00113 694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN 769 (968)
T ss_pred cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence 345679999999999995 57999999998654322 2356899999999999999999999999999999999999
Q ss_pred HHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCccCCC
Q 012608 109 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT---SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 185 (460)
Q Consensus 109 L~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~~t~ 185 (460)
|.+++. .+++..+.+++.|++.||+||| +.+ |+||||||+||+++.++..++. ||............+|.
T Consensus 770 L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~-iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~ 842 (968)
T PLN00113 770 LSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPA-VVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISS 842 (968)
T ss_pred HHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCC-eecCCCCHHhEEECCCCceEEE-eccccccccCCCccccc
Confidence 999984 3889999999999999999999 556 9999999999999998888775 66554444444557889
Q ss_pred cccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh-----hhh-----hccccccccccccC--CCCchhHHH
Q 012608 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-----LIR-----DRNLQMLTDSCLEG--QFTDDDGTE 253 (460)
Q Consensus 186 ~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~-----~~~-----~~~~~~~~~~~~~~--~~~~~~~~~ 253 (460)
.|+|||++.+..++.++|||||||++|||+||+.|+...... .+. ........++.... ..+.....+
T Consensus 843 ~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (968)
T PLN00113 843 AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVE 922 (968)
T ss_pred cccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHH
Confidence 999999999888999999999999999999999987432110 000 00111111222211 122344567
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+.+++.+||+.+|++|||+.++++.|+.+.+.
T Consensus 923 ~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 923 VMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 88999999999999999999999999887553
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=294.97 Aligned_cols=239 Identities=21% Similarity=0.245 Sum_probs=199.7
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 100 (460)
..+..|.+..++|.|+|+.|-.+. ..+++..++|++.... .+..+|+.++... +||||+++.+++..+...|+|
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeee
Confidence 346779999999999999999998 5678999999987652 2344677777766 899999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE-cCCCCeEEccCCCcccCCCCC
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF-DEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill-~~~~~~kl~DFg~a~~~~~~~ 179 (460)
||.+.|+-+.+.+.. .+.....+..|+.+|+.|+.|||++| |||||+||+|||+ ++.++++|+|||.++.....-
T Consensus 395 ~e~l~g~ell~ri~~---~~~~~~e~~~w~~~lv~Av~~LH~~g-vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~ 470 (612)
T KOG0603|consen 395 MELLDGGELLRRIRS---KPEFCSEASQWAAELVSAVDYLHEQG-VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSC 470 (612)
T ss_pred ehhccccHHHHHHHh---cchhHHHHHHHHHHHHHHHHHHHhcC-eeecCCChhheeecCCCCcEEEEEechhhhCchhh
Confidence 999999988887753 23333777889999999999999999 9999999999999 689999999999998776652
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh-hhhhccccccccccccCCCCchhHHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
+-.-|..|.|||+.....+++++|+||||++||+|++|+.|+.....+ .+.. . ...+.+...++...+++
T Consensus 471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~----~----i~~~~~s~~vS~~AKdL 542 (612)
T KOG0603|consen 471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT----R----IQMPKFSECVSDEAKDL 542 (612)
T ss_pred cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH----h----hcCCccccccCHHHHHH
Confidence 234578899999999888999999999999999999999998665444 1111 1 11223346788999999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
+++||+.||.+|+++.++..
T Consensus 543 l~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 543 LQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHhccCChhhCcChhhhcc
Confidence 99999999999999999987
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=306.79 Aligned_cols=256 Identities=18% Similarity=0.188 Sum_probs=214.2
Q ss_pred HHHHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecC---CCCCCHHHHHHHHHHHhcCCCCccceeeeEE
Q 012608 16 EQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNR---MAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 91 (460)
Q Consensus 16 ~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 91 (460)
..++...-+=++|.|++.||+|+||.|.++++ .+++.+|+|+++. ....+..-|..|-.+|..-+.+-|++++-.|
T Consensus 65 ~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF 144 (1317)
T KOG0612|consen 65 KKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF 144 (1317)
T ss_pred HHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh
Confidence 44566667778899999999999999999994 5699999999876 2233456789999999999999999999999
Q ss_pred eeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 92 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 92 ~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
.+++++|+||||++||+|-.++.+.. +++++.++-++..|+.||.-+|+.| +|||||||+|||||..|.+||+|||.
T Consensus 145 QD~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg-yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 145 QDERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG-YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cCccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc-ceeccCCcceeEecccCcEeeccchh
Confidence 99999999999999999999997533 7999999999999999999999999 99999999999999999999999998
Q ss_pred cccCCCC-----CCccCCCcccCcccccc-----CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccccc
Q 012608 172 MKNSRDG-----KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC 241 (460)
Q Consensus 172 a~~~~~~-----~~~~~t~~y~aPE~~~~-----~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 241 (460)
+-.+... ..-+|||.|.+||++.. +.|++.+|.||+||++|||+.|..||..+..-..+.++..--..-.
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~ 301 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLS 301 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcC
Confidence 7766643 34579999999999853 4589999999999999999999999998877666655544311111
Q ss_pred ccCCCCchhHHHHHHHHHHHcccCCCCCCC---hhHHHH
Q 012608 242 LEGQFTDDDGTELVRLASRCLQYEPRERPN---PKSLVT 277 (460)
Q Consensus 242 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps---~~~il~ 277 (460)
++.. ..+|++..+||++.+. +|..|.. ++++..
T Consensus 302 FP~~--~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 302 FPDE--TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred CCcc--cccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 1111 3478999999999885 5788876 888876
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=308.62 Aligned_cols=245 Identities=19% Similarity=0.248 Sum_probs=186.7
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEee-------
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCE------- 93 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 93 (460)
.-+.+++.++.||+||||.||+++ .-+|+.+|||++..... ..-..+.+|+.++.+|+|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 344556778888999999999999 55899999999976541 124578899999999999999988742210
Q ss_pred ----------------------------------------------------------C---------------------
Q 012608 94 ----------------------------------------------------------G--------------------- 94 (460)
Q Consensus 94 ----------------------------------------------------------~--------------------- 94 (460)
+
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred ---------------------------------CeeEEEEEcCCCCCHHhhhhccCCCCC--CHHHHHHHHHHHHHHHHH
Q 012608 95 ---------------------------------DERLLVAEYMPNETLAKHLFHWETHPM--KWAMRLRVVLHLAQALEY 139 (460)
Q Consensus 95 ---------------------------------~~~~lv~e~~~g~sL~~~~~~~~~~~~--~~~~~~~i~~qi~~~l~~ 139 (460)
-.+||-||||+..+|++++.. ..+ .....|+++++|+.||.|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~---N~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR---NHFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh---cccchhhHHHHHHHHHHHHHHHH
Confidence 114788999998777777753 223 468899999999999999
Q ss_pred HHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC----------------------CCCCccCCCcccCccccccCC
Q 012608 140 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----------------------DGKSYSTNLAFTPPEYLRTGR 197 (460)
Q Consensus 140 lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~----------------------~~~~~~~t~~y~aPE~~~~~~ 197 (460)
+|+.| ||||||||.||++++++.|||+|||++.... ..+...||..|+|||++.+..
T Consensus 713 IH~~g-iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 713 IHDQG-IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred HHhCc-eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 99999 9999999999999999999999999987511 113457899999999997654
Q ss_pred ---CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccccccc--CCCCchhHHHHHHHHHHHcccCCCCCCCh
Q 012608 198 ---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE--GQFTDDDGTELVRLASRCLQYEPRERPNP 272 (460)
Q Consensus 198 ---~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 272 (460)
|+.|+|+||||+|++||+. ||...+.... ....+.+...+ ..+..+.-+.-.++|++|++.||.+|||+
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~---iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA 865 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERAS---ILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTA 865 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHH---HHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCH
Confidence 8999999999999999986 4544332211 11112222221 12233333556789999999999999999
Q ss_pred hHHHH
Q 012608 273 KSLVT 277 (460)
Q Consensus 273 ~~il~ 277 (460)
.++|.
T Consensus 866 ~eLL~ 870 (1351)
T KOG1035|consen 866 TELLN 870 (1351)
T ss_pred HHHhh
Confidence 99987
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=308.69 Aligned_cols=146 Identities=23% Similarity=0.285 Sum_probs=131.4
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
+..|.+++.||.|+||.||+|... +++.||||+++...... ...+..|+.++..++||||+++++++...+..|+|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 567899999999999999999954 68999999987543322 36788999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
|||++|++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~g-IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHG-IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999863 456889999999999999999999999 9999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=271.91 Aligned_cols=218 Identities=20% Similarity=0.234 Sum_probs=178.7
Q ss_pred CCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhc
Q 012608 37 KAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH 115 (460)
Q Consensus 37 G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~ 115 (460)
|.+|.||++. ..+|+.||+|.+.... .+.+|...+....||||+++++++...+..++||||++|++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 8899999999 4568999999986543 233455556666899999999999999999999999999999998864
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-CCccCCCcccCccccc
Q 012608 116 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLR 194 (460)
Q Consensus 116 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~ 194 (460)
...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHREG-IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 346899999999999999999999999 999999999999999999999999987654432 2344567899999998
Q ss_pred cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCCh
Q 012608 195 TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 272 (460)
Q Consensus 195 ~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 272 (460)
+..++.++|+||+|+++|+|++|..|+...... .. .......+..+++.+.+++.+||+.||++||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG-IN---------THTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-cc---------cccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 888899999999999999999999765432111 00 001112445567889999999999999999986
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=293.14 Aligned_cols=247 Identities=14% Similarity=0.212 Sum_probs=205.7
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEee-----CCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE-----GDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~-----~~~~~ 98 (460)
+.++|+..+|.|.+|.||+++ ..+|+.+|+|++...... .+++..|..+++.+ .|||++.++|++.. ++.+|
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 345677788999999999999 678999999998765543 46788899999999 79999999999863 46799
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC--
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-- 176 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~-- 176 (460)
||||||.|||..|+++...+..+.|+.+..|++.++.|+.+||... ++|||||-.|||++.++.+||+|||++....
T Consensus 98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk-viHRDikG~NiLLT~e~~VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK-VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST 176 (953)
T ss_pred EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc-eeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence 9999999999999998777788999999999999999999999998 9999999999999999999999999887554
Q ss_pred --CCCCccCCCcccCcccccc-----CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 177 --DGKSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 177 --~~~~~~~t~~y~aPE~~~~-----~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
...+..||+.|||||++.. ..|+.++|+||||++..||.-|.+|+.....- ...+.....+.+...-+..
T Consensus 177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm---raLF~IpRNPPPkLkrp~k 253 (953)
T KOG0587|consen 177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM---RALFLIPRNPPPKLKRPKK 253 (953)
T ss_pred cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh---hhhccCCCCCCccccchhh
Confidence 3467889999999999854 34788999999999999999999776432111 0111222223333334667
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+.++.++|..||..|-.+||++.++++
T Consensus 254 Ws~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 254 WSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred HHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 8899999999999999999999998876
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=295.13 Aligned_cols=250 Identities=20% Similarity=0.275 Sum_probs=209.5
Q ss_pred cchhcccCCCCCCeEEEEE-EcCC----cEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQ----RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.+..++||+|+||+||+|. ...| -+||||++...... ...+++.|+-+|.+++|||+++++++|..+. ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 4557889999999999998 4444 46899988665433 4678999999999999999999999997765 88999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCc
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~ 181 (460)
+|+|+|+|.++++. ....+-....+.|..||++||.|||.+. ++||||-.+|||+..-..+|+.|||+++........
T Consensus 777 q~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~qr-lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQR-LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred HhcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhcc-hhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 99999999999986 3457888999999999999999999998 999999999999999999999999999987655322
Q ss_pred ------cCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 182 ------STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 182 ------~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
...+.|||-|.+....++.++|||||||++||++| |..|+.+...+.+.+-... ..+-..|+.++.++
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~-----geRLsqPpiCtiDV 929 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK-----GERLSQPPICTIDV 929 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc-----cccCCCCCCccHHH
Confidence 22578999999999999999999999999999988 7778776655544332211 11234567788999
Q ss_pred HHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 255 VRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
..++.+||..|+..||+++++...+....+.
T Consensus 930 y~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 930 YMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred HHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 9999999999999999999999888766554
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=281.59 Aligned_cols=238 Identities=20% Similarity=0.250 Sum_probs=199.4
Q ss_pred cccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCC
Q 012608 32 SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 108 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~s 108 (460)
+.||+|.||+||-|. ..+|+.||||++.+..... ..++..|+.||+.++||.||.+--.|+..+.+++|||.+.|.
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD- 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD- 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch-
Confidence 678999999999999 5579999999997655443 568999999999999999999999999999999999999754
Q ss_pred HHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCcccCCCC---CCcc
Q 012608 109 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---KSYS 182 (460)
Q Consensus 109 L~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~~~~~---~~~~ 182 (460)
..+++.....+.+++....-++.||+.||.|||.++ |+|.||||+|||+.. -.++||||||+|+..+.. .+..
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn-IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN-IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc-eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 445555556788999988889999999999999999 999999999999964 357999999999988764 5778
Q ss_pred CCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChh--hhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 183 TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 183 ~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
||+.|+|||++....|...-|+||+|+++|--++|.-||..+. .+.+.+..+. .+......++++..++|..
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFM------yPp~PW~eis~~AidlIn~ 801 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFM------YPPNPWSEISPEAIDLINN 801 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccc------cCCCchhhcCHHHHHHHHH
Confidence 9999999999999999999999999999999999998885432 1222222111 1223345677899999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
+|+..=.+|-|.+..+.
T Consensus 802 LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 802 LLQVKMRKRYSVDKSLS 818 (888)
T ss_pred HHHHHHHHhcchHhhcc
Confidence 99999999998887654
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=272.19 Aligned_cols=257 Identities=18% Similarity=0.254 Sum_probs=199.0
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC--CCCccceeeeEEeeCC----e
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL--RNNRLTNLLGCCCEGD----E 96 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~~iv~~~~~~~~~~----~ 96 (460)
.+....++++.+|+|.||.||+|.+ +++.||||++.... .+.|..|-.|.+.. +|+||+++++.-..+. .
T Consensus 207 ~~l~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 207 LELDPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred ccCCchhhHHHhhcCccceeehhhc-cCceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 3456678888999999999999998 45999999987544 56788888887766 8999999999876655 7
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--------CcccccccCCcEEEcCCCCeEEcc
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--------RALYHDLNAYRILFDEDGNPRLST 168 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--------~iiH~Dikp~Nill~~~~~~kl~D 168 (460)
++||++|.+.|+|.+++. ...++|....+++..+++||+|||+.- +|+|||||+.|||+..|++.-|+|
T Consensus 283 ywLVt~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred eeEEeeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 899999999999999994 678999999999999999999999731 399999999999999999999999
Q ss_pred CCCcccCCCCC------CccCCCcccCccccccCC-CC-----CCCceehHHHHHHHHhhCCCCCC-Ch-----------
Q 012608 169 FGLMKNSRDGK------SYSTNLAFTPPEYLRTGR-VT-----PESVIYSFGTLLLDLLSGKHIPP-SH----------- 224 (460)
Q Consensus 169 Fg~a~~~~~~~------~~~~t~~y~aPE~~~~~~-~~-----~~sDi~slG~~l~el~tg~~p~~-~~----------- 224 (460)
||+|.++.... ...||..|||||++.+.. +. .+.||||+|.|+|||++...-.. +.
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 99998766432 357899999999996532 22 37999999999999999753221 10
Q ss_pred -----hhhhhhhccccccccccccCCCC-chhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 225 -----ALDLIRDRNLQMLTDSCLEGQFT-DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 225 -----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
..+.+..........+.++.... ..-..-+++.+..||..||+.|.|+.=+-+.+..+....
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 11111111111111111111111 123457899999999999999999999988888776544
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=270.69 Aligned_cols=236 Identities=19% Similarity=0.266 Sum_probs=202.3
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 100 (460)
++++.+..||.|+||.|-++. ..+.+.+|||+++.+. .++.+--..|-++|... +-|.+++++.+|..-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 457788999999999999998 4457889999998753 22344455677777777 567899999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC----
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR---- 176 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~---- 176 (460)
|||+.||+|--+++ .-+.+.+..+.-++.+|+-||-+||++| ||.||||.+|||++.+|.+||.|||+++..-
T Consensus 429 MEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kg-IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCC-eeeeeccccceEeccCCceEeeecccccccccCCc
Confidence 99999999987776 4577889999999999999999999999 9999999999999999999999999987532
Q ss_pred CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 177 DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 177 ~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
...+++||+.|+|||.+...+|+...|.||+|++||||+.|++||.++..+.+-...... .-.+|+.++.+...
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh------nvsyPKslSkEAv~ 579 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH------NVSYPKSLSKEAVA 579 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc------cCcCcccccHHHHH
Confidence 346789999999999999999999999999999999999999999988666554443332 22578889999999
Q ss_pred HHHHHcccCCCCCC
Q 012608 257 LASRCLQYEPRERP 270 (460)
Q Consensus 257 li~~~l~~~p~~Rp 270 (460)
++...|...|.+|.
T Consensus 580 ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 580 ICKGLLTKHPGKRL 593 (683)
T ss_pred HHHHHhhcCCcccc
Confidence 99999999999994
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=281.97 Aligned_cols=242 Identities=17% Similarity=0.201 Sum_probs=208.1
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEcCC-cEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLENQ-RRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
..+++.+++..||-|+||.|-++...+. ..+|+|+++....- ..+....|-.+|..++.|.||++|..|.++..+|
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY 496 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY 496 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence 3456678899999999999999986443 34889988765433 3567889999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+.||-|-||.|+..++ ..+.+...+..-++.-++.|++|||++| ||.|||||+|.+++.+|-+||.|||+|+..+..
T Consensus 497 mLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~-iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 497 MLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKG-IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcC-ceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999997 4677999999999999999999999999 999999999999999999999999999987765
Q ss_pred C---CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 K---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 ~---~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
. +++||+.|.|||.+.+...+.+.|.||||+++|||++|.+||.+...-...+.....+.. ..+|..++....
T Consensus 574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~----i~~Pr~I~k~a~ 649 (732)
T KOG0614|consen 574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK----IEFPRRITKTAT 649 (732)
T ss_pred CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh----hhcccccchhHH
Confidence 3 679999999999999999999999999999999999999999876554444444333332 245566778899
Q ss_pred HHHHHHcccCCCCCCC
Q 012608 256 RLASRCLQYEPRERPN 271 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps 271 (460)
++|.+++..+|.+|.-
T Consensus 650 ~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 650 DLIKKLCRDNPTERLG 665 (732)
T ss_pred HHHHHHHhcCcHhhhc
Confidence 9999999999999964
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=295.50 Aligned_cols=248 Identities=21% Similarity=0.312 Sum_probs=202.5
Q ss_pred hhcccCCCCCCeEEEEEEc--------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEE
Q 012608 30 IVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 99 (460)
+.+.||+|+||.|++|... ....||||.++..... +.+.+..|+.+|+.+ +||||+.++|+|..++..++
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~ 379 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV 379 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence 3458899999999999832 1457999999876544 467899999999999 69999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccC-------C-------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeE
Q 012608 100 VAEYMPNETLAKHLFHWE-------T-------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPR 165 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~-------~-------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~k 165 (460)
|+||+..|+|.++++..+ . ..++....+.++.||+.|++||+++. +|||||-.+|||+.++..+|
T Consensus 380 v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~-~vHRDLAaRNVLi~~~~~~k 458 (609)
T KOG0200|consen 380 IVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP-CVHRDLAARNVLITKNKVIK 458 (609)
T ss_pred EEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC-ccchhhhhhhEEecCCCEEE
Confidence 999999999999998644 0 13888999999999999999999998 99999999999999999999
Q ss_pred EccCCCcccCCCCCCc-----c--CCCcccCccccccCCCCCCCceehHHHHHHHHhhCC-CCCCChh-hhhhhhccccc
Q 012608 166 LSTFGLMKNSRDGKSY-----S--TNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHA-LDLIRDRNLQM 236 (460)
Q Consensus 166 l~DFg~a~~~~~~~~~-----~--~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~-~p~~~~~-~~~~~~~~~~~ 236 (460)
|+|||+++.......+ . -+..|||||.+....++.+|||||||+++||++|.. .|+++-. ...+..
T Consensus 459 IaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~----- 533 (609)
T KOG0200|consen 459 IADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE----- 533 (609)
T ss_pred EccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-----
Confidence 9999999865443222 1 245699999999988999999999999999999954 5555421 111111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
..........|..++.++..|+..||..+|++||++.++.+.|+...
T Consensus 534 ~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 534 FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 11122223456677899999999999999999999999999998853
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=266.89 Aligned_cols=248 Identities=21% Similarity=0.284 Sum_probs=195.8
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC-CCC------HHHHHHHHHHHhcCCCCccceeeeEEeeC-Ce
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA-WPD------PRQFLEEARSVGQLRNNRLTNLLGCCCEG-DE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~ 96 (460)
.+|-++..||+|+|+.||++. +...+.||+|+-.... +.+ .+...+|..|.+.|+||.||++++++.-+ +.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 356788999999999999998 6668999999864332 222 24567899999999999999999999755 56
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEcC---CCCeEEccCCCc
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDE---DGNPRLSTFGLM 172 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~~---~~~~kl~DFg~a 172 (460)
+|-|+|||+|.+|.-+++ ...-+++.++++|+.||+.||.||.... +|||=||||.|||+.. -|.+||.|||++
T Consensus 543 FCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred ceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 889999999999988886 4567899999999999999999999864 6999999999999953 477999999999
Q ss_pred ccCCCC-----------CCccCCCcccCccccccC----CCCCCCceehHHHHHHHHhhCCCCCCChhh-hh-hhhcccc
Q 012608 173 KNSRDG-----------KSYSTNLAFTPPEYLRTG----RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DL-IRDRNLQ 235 (460)
Q Consensus 173 ~~~~~~-----------~~~~~t~~y~aPE~~~~~----~~~~~sDi~slG~~l~el~tg~~p~~~~~~-~~-~~~~~~~ 235 (460)
+.+... ....||..|++||++.-+ ..+.+.||||+||++|..+.|+.||..... .. +....+.
T Consensus 621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIl 700 (775)
T KOG1151|consen 621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTIL 700 (775)
T ss_pred hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchh
Confidence 987643 234679999999998543 368899999999999999999999965422 11 1111111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......+ ...+.++++...||++||++.-++|..+.++..
T Consensus 701 kAtEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 701 KATEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred cceeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1111111 123457789999999999999999998887755
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=257.97 Aligned_cols=251 Identities=19% Similarity=0.262 Sum_probs=194.5
Q ss_pred CCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCC--CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeC------
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM--AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------ 94 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 94 (460)
..+.|+.+.++|+|.||.||+|+ ..+|+.||+|++-.. ..+-.....+|+.+|..|+|+|++.++.+|...
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 44678889999999999999999 456889999876432 233356788999999999999999999887532
Q ss_pred --CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCc
Q 012608 95 --DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 172 (460)
Q Consensus 95 --~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a 172 (460)
..+|+||.+|+ .+|..++.. ....++..++.+++.++..||.|+|... |+|||+||.|+||+.+|.+||+|||++
T Consensus 95 ~r~t~ylVf~~ce-hDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k-ilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 95 DRATFYLVFDFCE-HDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK-ILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ccceeeeeHHHhh-hhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh-HHhhcccHhhEEEcCCceEEeeccccc
Confidence 34899999998 688888753 3357899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCC--------CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh-------ccccc
Q 012608 173 KNSRDGK--------SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD-------RNLQM 236 (460)
Q Consensus 173 ~~~~~~~--------~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~-------~~~~~ 236 (460)
+.+.... ....|..|++||.+.+. .++++.|||..||++.||+||.+.+.+........ ..-..
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 7655432 22348899999999875 48999999999999999999998876653321100 00000
Q ss_pred cc--------------cccccCCC--------CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 LT--------------DSCLEGQF--------TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 ~~--------------~~~~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.. .+.+.+.+ +-.-.++..+++.+++..||.+|+++++++.
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 00 00000000 0111347889999999999999999999987
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=244.05 Aligned_cols=199 Identities=18% Similarity=0.213 Sum_probs=169.0
Q ss_pred cchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcC
Q 012608 28 ENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
...+.+||+|++|.|-+-+ ..+|...|+|.+...-... .++.++|+.+..+. .+|.+|.++|....+...++.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 3457889999999999988 5679999999987654332 56788899887776 7999999999999999999999999
Q ss_pred CCCCHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC--
Q 012608 105 PNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS-- 180 (460)
Q Consensus 105 ~g~sL~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~-- 180 (460)
+ .||..+... ..++.+++..+-+|+..+..||.|||++-.+||||+||+||||+.+|++|+||||++....++-.
T Consensus 128 ~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt 206 (282)
T KOG0984|consen 128 D-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT 206 (282)
T ss_pred h-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH
Confidence 7 888776543 25678999999999999999999999986699999999999999999999999999877665432
Q ss_pred -ccCCCcccCcccccc----CCCCCCCceehHHHHHHHHhhCCCCCCChhhh
Q 012608 181 -YSTNLAFTPPEYLRT----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 227 (460)
Q Consensus 181 -~~~t~~y~aPE~~~~----~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~ 227 (460)
-.|-..|||||.+.. ..|+.+|||||||+++.||.+++.|++.....
T Consensus 207 ~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 207 MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 356788999999853 35889999999999999999999988765443
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=265.55 Aligned_cols=249 Identities=16% Similarity=0.182 Sum_probs=195.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CC-Cc----cceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RN-NR----LTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h-~~----iv~~~~~~~~~~~~~ 98 (460)
..|.+++.+|+|.||.|-.... .++..||||+++.-. .-.+...-|+++|+++ .+ |+ ++++.++|.-.+..+
T Consensus 89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 4689999999999999999984 458999999986432 1245667899999999 33 33 788888899999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC------------------
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE------------------ 160 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~------------------ 160 (460)
||+|.+ |.|+.+++...+-.+++...+..++.|++.++++||+.+ ++|.||||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k-l~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK-LTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc-eeecCCChheEEEeccceEEEeccCCccceecc
Confidence 999999 579999998766678999999999999999999999999 999999999999832
Q ss_pred --CCCeEEccCCCcccCCCC-CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh---hhhccc
Q 012608 161 --DGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNL 234 (460)
Q Consensus 161 --~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~---~~~~~~ 234 (460)
+..++|+|||.|...... ...+.|..|.|||++.+-..+.++||||+||||+|+.||...|+.+.... +.+...
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl 325 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL 325 (415)
T ss_pred CCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence 234789999998765543 56678999999999999999999999999999999999998886553111 111111
Q ss_pred ccccc---------------------------------cccc-C---CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 QMLTD---------------------------------SCLE-G---QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 ~~~~~---------------------------------~~~~-~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..++. ++.+ . ......-..+.+++++||..||.+|+|+.|++.
T Consensus 326 Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 326 GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 10000 0000 0 011122346899999999999999999999987
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-34 Score=286.65 Aligned_cols=254 Identities=20% Similarity=0.242 Sum_probs=168.8
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cC----CcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeE------Ee
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-EN----QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGC------CC 92 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~------~~ 92 (460)
...+|++.+.||+|+||.||+|++ .+ +..||+|+++.... .+....| .++...+.++..+... ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 556788999999999999999995 45 78999998764331 1111111 1222222233222221 23
Q ss_pred eCCeeEEEEEcCCCCCHHhhhhccCC------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCC
Q 012608 93 EGDERLLVAEYMPNETLAKHLFHWET------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154 (460)
Q Consensus 93 ~~~~~~lv~e~~~g~sL~~~~~~~~~------------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~ 154 (460)
.+...++|+||+++++|.+++..... .......+..++.|++.||.|||+++ |+||||||+
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g-IiHRDLKP~ 284 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG-IVHRDVKPQ 284 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC-EEeCcCCHH
Confidence 55678999999999999998864211 01123346679999999999999999 999999999
Q ss_pred cEEEcC-CCCeEEccCCCcccCCCC-----CCccCCCcccCccccccCC----------------------CCCCCceeh
Q 012608 155 RILFDE-DGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGR----------------------VTPESVIYS 206 (460)
Q Consensus 155 Nill~~-~~~~kl~DFg~a~~~~~~-----~~~~~t~~y~aPE~~~~~~----------------------~~~~sDi~s 206 (460)
|||++. ++.+||+|||+++..... ....+++.|||||.+.... ++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999985 578999999999754322 3557789999999764322 334669999
Q ss_pred HHHHHHHHhhCCCCCCChhhhhh---hhccc--cc---cccccccC------CCCchhHHHHHHHHHHHcccCCCCCCCh
Q 012608 207 FGTLLLDLLSGKHIPPSHALDLI---RDRNL--QM---LTDSCLEG------QFTDDDGTELVRLASRCLQYEPRERPNP 272 (460)
Q Consensus 207 lG~~l~el~tg~~p~~~~~~~~~---~~~~~--~~---~~~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~ 272 (460)
|||++|||+++..++........ ..... .. ........ ...........+|+.+||+.||++|||+
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta 444 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISA 444 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCH
Confidence 99999999998755443221111 00000 00 00000000 0011112345689999999999999999
Q ss_pred hHHHHHhccccc
Q 012608 273 KSLVTALSPLQK 284 (460)
Q Consensus 273 ~~il~~L~~~~~ 284 (460)
.++++ .++..
T Consensus 445 ~e~L~--Hpff~ 454 (566)
T PLN03225 445 KAALA--HPYFD 454 (566)
T ss_pred HHHhC--CcCcC
Confidence 99998 44443
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=257.54 Aligned_cols=234 Identities=22% Similarity=0.274 Sum_probs=193.7
Q ss_pred CCCeEEEEEEc-CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhc
Q 012608 38 APNVVYKGKLE-NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFH 115 (460)
Q Consensus 38 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~ 115 (460)
+||.||++... +|+.+++|++....... .+.+.+|++.+++++|+||+++++.+......++++|++++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 57899999965 58999999998766555 68899999999999999999999999998999999999999999998864
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---CCccCCCcccCccc
Q 012608 116 WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEY 192 (460)
Q Consensus 116 ~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~ 192 (460)
...+++..++.++.+++.++.+||+.+ ++|+||+|+||++++++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSNG-IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHcC-eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 223889999999999999999999999 999999999999999999999999998876553 45567889999999
Q ss_pred cccCCCCCCCceehHHHHHHHHhhCCCCCCC-hhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCC
Q 012608 193 LRTGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 271 (460)
Q Consensus 193 ~~~~~~~~~sDi~slG~~l~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 271 (460)
+.+...+.++||||||++++++++|..|+.. ................ .......++.++.+++.+||..+|++||+
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 234 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP---FPPPEWKISPEAKDLIRKLLVKDPEKRLT 234 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC---CccccccCCHHHHHHHHHHccCCchhccC
Confidence 9888889999999999999999999988865 2222221111111110 00111116678999999999999999999
Q ss_pred hhHHHH
Q 012608 272 PKSLVT 277 (460)
Q Consensus 272 ~~~il~ 277 (460)
+.++++
T Consensus 235 ~~~~~~ 240 (244)
T smart00220 235 AEEALQ 240 (244)
T ss_pred HHHHhh
Confidence 999987
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=259.75 Aligned_cols=251 Identities=18% Similarity=0.249 Sum_probs=196.0
Q ss_pred ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC--CCCccceeeeEEeeCC----eeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL--RNNRLTNLLGCCCEGD----ERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~~iv~~~~~~~~~~----~~~lv 100 (460)
...+++.+|+|-||+||+|.+ .|+.||||++.... .+.+.+|.+|++.. +|+||+.+++.-..++ .+|||
T Consensus 212 qI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred eeEEEEEecCccccceeeccc-cCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence 356788999999999999998 68999999986543 56788899998876 9999999998765443 58999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----C--CcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-----G--RALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-----~--~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
++|-+.|||.|++. ...++....++++..++.||++||.. | -|.|||||+.|||+..++..-|+|+|+|.
T Consensus 288 TdYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 288 TDYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred eecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 99999999999995 57899999999999999999999962 2 29999999999999999999999999998
Q ss_pred cCCCC--------CCccCCCcccCccccccCC----CC--CCCceehHHHHHHHHhhCC----------CCCCCh-----
Q 012608 174 NSRDG--------KSYSTNLAFTPPEYLRTGR----VT--PESVIYSFGTLLLDLLSGK----------HIPPSH----- 224 (460)
Q Consensus 174 ~~~~~--------~~~~~t~~y~aPE~~~~~~----~~--~~sDi~slG~~l~el~tg~----------~p~~~~----- 224 (460)
..... ....||..|||||++...- +. ..+||||||.|+||++... .||..-
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 76544 3457999999999985422 22 3799999999999997642 344221
Q ss_pred hhhhhhhcc-ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 225 ALDLIRDRN-LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 225 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
..+.+..-. ...+.+..+..-.....-..+.++++.||..+|.-|-|+-.+.+.|..+..
T Consensus 445 s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 445 SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 112222111 112222222222233455778999999999999999999999998888764
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-33 Score=273.59 Aligned_cols=252 Identities=17% Similarity=0.189 Sum_probs=178.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE-----------------cCCcEEEEEEecCCCCCCHHH--------------HHHHH
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-----------------ENQRRIAVKRFNRMAWPDPRQ--------------FLEEA 73 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E~ 73 (460)
.++|.+.++||+|+||+||+|.. ..++.||||+++.......+. ...|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 45678889999999999999963 235689999987543322223 34567
Q ss_pred HHHhcCCCCcc-----ceeeeEEee--------CCeeEEEEEcCCCCCHHhhhhccC----------------------C
Q 012608 74 RSVGQLRNNRL-----TNLLGCCCE--------GDERLLVAEYMPNETLAKHLFHWE----------------------T 118 (460)
Q Consensus 74 ~~l~~l~h~~i-----v~~~~~~~~--------~~~~~lv~e~~~g~sL~~~~~~~~----------------------~ 118 (460)
.++.+++|.++ +.++++|.. .+..++||||+++++|.+++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777766554 677777653 346899999999999999886321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----CccCCCcccCcccc
Q 012608 119 HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-----SYSTNLAFTPPEYL 193 (460)
Q Consensus 119 ~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-----~~~~t~~y~aPE~~ 193 (460)
..+++..+..++.|++.+|.|||+.+ |+||||||+|||++.++.+||+|||++....... ...+|+.|+|||.+
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~-ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l 382 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIG-IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL 382 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence 12456778899999999999999999 9999999999999999999999999987543322 12337899999987
Q ss_pred ccCCC----------------------CCCCceehHHHHHHHHhhCCC-CCCChhh--hhhhh--cc---cccccccccc
Q 012608 194 RTGRV----------------------TPESVIYSFGTLLLDLLSGKH-IPPSHAL--DLIRD--RN---LQMLTDSCLE 243 (460)
Q Consensus 194 ~~~~~----------------------~~~sDi~slG~~l~el~tg~~-p~~~~~~--~~~~~--~~---~~~~~~~~~~ 243 (460)
..... ..+.||||+||++++|++|.. |+..... ..... .. ..........
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~ 462 (507)
T PLN03224 383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYD 462 (507)
T ss_pred cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCC
Confidence 54221 124799999999999999975 4322110 00000 00 0000111111
Q ss_pred CCCCchhHHHHHHHHHHHcccCC---CCCCChhHHHH
Q 012608 244 GQFTDDDGTELVRLASRCLQYEP---RERPNPKSLVT 277 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p---~~Rps~~~il~ 277 (460)
-......+....+++.+||..+| .+|+|++++++
T Consensus 463 ~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 463 FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11234567889999999999876 68999999987
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=251.51 Aligned_cols=247 Identities=18% Similarity=0.266 Sum_probs=189.5
Q ss_pred chhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCC-----eeEEE
Q 012608 29 NIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-----ERLLV 100 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv 100 (460)
+--+-||.|+||+||.++ -.+|+.||+|++..-. ...-+.+.+|+.+|..++|.|+...++...... .+|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 445778999999999999 4579999999985322 123567899999999999999999998875443 36789
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 180 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~ 180 (460)
+|.|. .+|...+. +..+++.+.+.-+++||++||+|||+.+ |+||||||.|.|++.+..+||||||+++.-.....
T Consensus 136 TELmQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~-ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~ 211 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN-ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR 211 (449)
T ss_pred HHHHH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc-hhhccCCCccEEeccCceEEecccccccccchhhh
Confidence 99997 78888886 5678999999999999999999999999 99999999999999999999999999987654433
Q ss_pred c-----cCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhh----------------hhh----hccc
Q 012608 181 Y-----STNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALD----------------LIR----DRNL 234 (460)
Q Consensus 181 ~-----~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~----------------~~~----~~~~ 234 (460)
. ..|-.|+|||.+.+.. |+.+.||||+||++.||+..+..|.....- .+. ....
T Consensus 212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~ 291 (449)
T KOG0664|consen 212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN 291 (449)
T ss_pred hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence 2 3467899999998865 899999999999999999888766433110 000 0000
Q ss_pred cccccccccCC--------CCchhHHHHHHHHHHHcccCCCCCCChhHHHHHh
Q 012608 235 QMLTDSCLEGQ--------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 235 ~~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L 279 (460)
+.+..+...+. .+..-..+...++.+++..||..|.+..+.+..+
T Consensus 292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 01111111111 1112335677888999999999999999888754
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=267.81 Aligned_cols=249 Identities=18% Similarity=0.213 Sum_probs=198.8
Q ss_pred HHHHHHHhcCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeE
Q 012608 15 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGC 90 (460)
Q Consensus 15 ~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 90 (460)
|--|+++.-+=+-+-.|+-||-|+||.|.++. .++...+|+|.+.... .......+.|..||..-+.+-||+++-.
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 44455665555667788999999999999998 5667889999886543 2234568889999999999999999999
Q ss_pred EeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCC
Q 012608 91 CCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 170 (460)
Q Consensus 91 ~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg 170 (460)
|.+.+.+|+||+|++||++-.++. .-+.+.+..++-++.++..|+++.|..| +|||||||+|||||.+|.+||.|||
T Consensus 698 FQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmG-FIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 698 FQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMG-FIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred eccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhcc-ceecccCccceEEccCCceeeeecc
Confidence 999999999999999999988886 4577999999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCC---------C-------------------------------------CCccCCCcccCccccccCCCCCCCce
Q 012608 171 LMKNSRD---------G-------------------------------------KSYSTNLAFTPPEYLRTGRVTPESVI 204 (460)
Q Consensus 171 ~a~~~~~---------~-------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDi 204 (460)
++.-+.- . -...||+.|+|||++....++.-+|.
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 9763210 0 01357899999999998889999999
Q ss_pred ehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCC
Q 012608 205 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269 (460)
Q Consensus 205 ~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 269 (460)
||.|||||||+.|+.||..........+... +...+.-.+..++++++..+|.+++. +++.|
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~tq~kv~n--w~~~l~~~~~~~ls~e~~~li~kLc~-sad~R 916 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGETQYKVIN--WRNFLHIPYQGNLSKEALDLIQKLCC-SADSR 916 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCcceeeeee--hhhccccccccccCHHHHHHHHHHhc-Chhhh
Confidence 9999999999999999976554433322221 12222223345677888888877653 46666
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=271.59 Aligned_cols=250 Identities=18% Similarity=0.217 Sum_probs=207.9
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+-=.+|++++++|+|.||.||+++ ..+++..|+|+++....++..-+++|+-+++..+|||||.+++.+...+..|++|
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM 91 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM 91 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence 334679999999999999999999 5679999999999988888899999999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC----C
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR----D 177 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~----~ 177 (460)
|||.||+|++.-+ ..+++++.++..+.+..+.|++|||+.+ =+|||||-.|||+++.|.+|+.|||.+..+. .
T Consensus 92 EycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~g-k~hRdiKGanilltd~gDvklaDfgvsaqitati~K 168 (829)
T KOG0576|consen 92 EYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQG-KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK 168 (829)
T ss_pred EecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCC-cccccccccceeecccCceeecccCchhhhhhhhhh
Confidence 9999999999765 5688999999999999999999999999 8999999999999999999999999876554 4
Q ss_pred CCCccCCCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCC-hhhhhhhhccccccccccccCCCCchhHHH
Q 012608 178 GKSYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 178 ~~~~~~t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
..++.||+.|||||+.. .+.|...+|||++|++..|+-.-++|... +......-........+.+ +-+...++.
T Consensus 169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l--kDk~kws~~ 246 (829)
T KOG0576|consen 169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL--KDKTKWSEF 246 (829)
T ss_pred hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc--cCCccchHH
Confidence 56889999999999873 35588899999999999999877755322 1111111111111111111 123345688
Q ss_pred HHHHHHHHcccCCCCCCChhHHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+|+..||..+|++|||++.++.
T Consensus 247 fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhhee
Confidence 999999999999999999988776
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-33 Score=247.09 Aligned_cols=242 Identities=18% Similarity=0.265 Sum_probs=200.2
Q ss_pred CCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (460)
+..++.+++.||+|+|..|.+++ ..+.+.+|+|+++..-. .+....+.|-.+..+- +||.+|.++.+|..+..++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 45677889999999999999999 55689999999986533 3456778888888888 7999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC--
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-- 176 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~-- 176 (460)
+|.||++||+|--++. ....++++.++-+...|+.||.|||++| ||.||+|.+|||+|..|.+||.|+|+++..-
T Consensus 328 fvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rg-iiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERG-IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcC-eeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 9999999999855444 4568999999999999999999999999 9999999999999999999999999987532
Q ss_pred --CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh----hccccccccccccCCCCchh
Q 012608 177 --DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR----DRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 177 --~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 250 (460)
..++++||+.|.|||.+.+..|+...|.|+||++++||+.|+.||..-..+... ...++.+... .-.+|..+
T Consensus 405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--qiriprsl 482 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--QIRIPRSL 482 (593)
T ss_pred CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--ccccccee
Confidence 346789999999999999999999999999999999999999998543221111 1111111111 12456677
Q ss_pred HHHHHHHHHHHcccCCCCCC
Q 012608 251 GTELVRLASRCLQYEPRERP 270 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rp 270 (460)
+-....++...|.+||++|.
T Consensus 483 svkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 483 SVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ehhhHHHHHHhhcCCcHHhc
Confidence 78889999999999999994
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.4e-33 Score=272.78 Aligned_cols=237 Identities=22% Similarity=0.245 Sum_probs=182.3
Q ss_pred CCcccchhcccCCCCCC-eEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEE
Q 012608 24 GFAVENIVSEHGEKAPN-VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.|+..+++ |.|+.| .||+|.. .|+.||||.+-... .....+||.+|+.- .|||||++++.-.++...||..
T Consensus 510 ~~~~~eil---G~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 510 FFSPKEIL---GYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eeccHHHc---ccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 34455555 666664 5899998 67899999985543 45678999999999 6999999999988889999999
Q ss_pred EcCCCCCHHhhhhccCCCCC---CHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---C--CCeEEccCCCcc
Q 012608 102 EYMPNETLAKHLFHWETHPM---KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---D--GNPRLSTFGLMK 173 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~---~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~--~~~kl~DFg~a~ 173 (460)
|.|. .||.+++... .... .....+.++.|+++||++||+.+ ||||||||.||||+. + .+++|+|||+++
T Consensus 583 ELC~-~sL~dlie~~-~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~-iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 583 ELCA-CSLQDLIESS-GLDVEMQSDIDPISVLSQIASGLAHLHSLK-IVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred hHhh-hhHHHHHhcc-ccchhhcccccHHHHHHHHHHHHHHHHhcc-cccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 9997 9999999752 1111 11345778999999999999998 999999999999975 3 468999999998
Q ss_pred cCCCC-------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhC-CCCCCChhhhh--hhhcccccccccccc
Q 012608 174 NSRDG-------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSG-KHIPPSHALDL--IRDRNLQMLTDSCLE 243 (460)
Q Consensus 174 ~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg-~~p~~~~~~~~--~~~~~~~~~~~~~~~ 243 (460)
..... ....||-+|+|||++.....+.+.||||+||++|+.++| .+||....... +...... +.
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~-L~----- 733 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYT-LV----- 733 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccc-ee-----
Confidence 76543 345789999999999988888899999999999999998 56765432211 1111110 00
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+.+....+..++|.+|+.++|..||++.+|+.
T Consensus 734 -~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 -HLEPLPDCEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -eeccCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 011111117899999999999999999999986
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-32 Score=238.89 Aligned_cols=244 Identities=17% Similarity=0.214 Sum_probs=190.8
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeC------Cee
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DER 97 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~ 97 (460)
+|.-++-+|.|+- .|..+- .-.+++||+|++.... ....++..+|..++..+.|+||++++.++.-. ...
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4666778899887 555555 3358999999886542 33467888999999999999999999998654 347
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
|+|||+|+ .+|...+. -.++-.+...|+.|++.|++|||+.| |+||||||+||++..++.+||+|||+++.-..
T Consensus 97 y~v~e~m~-~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~-IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 97 YLVMELMD-ANLCQVIL----MELDHETISYILYQMLCGIKHLHSAG-IIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred HHHHHhhh-hHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcc-eeecccCcccceecchhheeeccchhhcccCc
Confidence 99999997 88988875 45777889999999999999999999 99999999999999999999999999987554
Q ss_pred C---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh-----------------------
Q 012608 178 G---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----------------------- 231 (460)
Q Consensus 178 ~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~----------------------- 231 (460)
. +.+..|..|.|||++.+..+....||||+||++.||++|+..|++...-....
T Consensus 171 ~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~ 250 (369)
T KOG0665|consen 171 DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRN 250 (369)
T ss_pred ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHH
Confidence 4 45667889999999998889999999999999999999998887642100000
Q ss_pred -----------ccccccccccccCC--CCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 232 -----------RNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 232 -----------~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.....+++..+... .++.-+..+..++.+||..+|++|.|++++|.
T Consensus 251 yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 251 YVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 00001111111111 11123456889999999999999999999998
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=230.52 Aligned_cols=206 Identities=28% Similarity=0.419 Sum_probs=182.7
Q ss_pred cCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHHh
Q 012608 34 HGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAK 111 (460)
Q Consensus 34 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~ 111 (460)
||.|++|.||++... +|+.+++|++...... ....+.+|++.++.++|++|+++++++......++++|+++|++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999964 4899999998766533 34689999999999999999999999999899999999999999999
Q ss_pred hhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-CCCeEEccCCCcccCCCC----CCccCCCc
Q 012608 112 HLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRDG----KSYSTNLA 186 (460)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~DFg~a~~~~~~----~~~~~t~~ 186 (460)
++.... ..++...+..++.+++.++.+||+.+ ++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~-~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNG-IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 986421 46889999999999999999999999 999999999999998 899999999998766543 34556788
Q ss_pred ccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccC
Q 012608 187 FTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265 (460)
Q Consensus 187 y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 265 (460)
|++||.+... ..+.++|+|++|++++++ ..+.+++.+|++.+
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999876 788899999999999999 46889999999999
Q ss_pred CCCCCChhHHHHH
Q 012608 266 PRERPNPKSLVTA 278 (460)
Q Consensus 266 p~~Rps~~~il~~ 278 (460)
|.+||++.++++.
T Consensus 202 p~~R~~~~~l~~~ 214 (215)
T cd00180 202 PEKRPSAKEILEH 214 (215)
T ss_pred cccCcCHHHHhhC
Confidence 9999999999874
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-32 Score=251.71 Aligned_cols=196 Identities=18% Similarity=0.183 Sum_probs=168.9
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC------CCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR------NNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~ 98 (460)
+.|.+.+-.|.|-||+|.+|... .|..||||++...... .+.=+.|+++|++|. .-|+++++..|...+.+|
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 56888999999999999999954 4889999999765432 244568999999994 358999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-CCeEEccCCCcccCC
Q 012608 99 LVAEYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSR 176 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~DFg~a~~~~ 176 (460)
||+|-+. -+|.+++...+ +-.+....+..++.|+..||..|-..| |+|.||||+|||+++. ..+||||||.|....
T Consensus 511 lVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~-vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ 588 (752)
T KOG0670|consen 511 LVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG-VLHADIKPDNILVNESKNILKLCDFGSASFAS 588 (752)
T ss_pred EEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC-eeecccCccceEeccCcceeeeccCccccccc
Confidence 9999995 89999997643 345778899999999999999999999 9999999999999966 558999999887665
Q ss_pred CC--CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCCh
Q 012608 177 DG--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 224 (460)
Q Consensus 177 ~~--~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~ 224 (460)
.. ..+..+..|.|||.+.|-+|+...|+||+||+||||.||+..|++.
T Consensus 589 eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 589 ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 43 3455677899999999999999999999999999999999998875
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=252.14 Aligned_cols=199 Identities=15% Similarity=0.173 Sum_probs=172.2
Q ss_pred HhcCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC--------CHHHHHHHHHHHhcCC---CCccceee
Q 012608 21 ATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--------DPRQFLEEARSVGQLR---NNRLTNLL 88 (460)
Q Consensus 21 ~~~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---h~~iv~~~ 88 (460)
...+|++|..++.+|+|+||.|+++.++ +...|+||.+.+...- +.-..-.|++||..|+ |+||++++
T Consensus 556 ~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 556 EYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred eecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence 3478999999999999999999999954 5778999988654311 1123557999999996 99999999
Q ss_pred eEEeeCCeeEEEEEcC-CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEc
Q 012608 89 GCCCEGDERLLVAEYM-PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 167 (460)
Q Consensus 89 ~~~~~~~~~~lv~e~~-~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~ 167 (460)
++|++++.+|++||.- +|.+|.+++.. ...+++.++..|++||+.|+++||+.| |||||||-+||.++.+|.+||+
T Consensus 636 dfFEddd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~~~-ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 636 DFFEDDDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHDQG-IVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred heeecCCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccccC-ceecccccccEEEecCCeEEEe
Confidence 9999999999999975 46788898863 456999999999999999999999999 9999999999999999999999
Q ss_pred cCCCcccCC--CCCCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCC
Q 012608 168 TFGLMKNSR--DGKSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPP 222 (460)
Q Consensus 168 DFg~a~~~~--~~~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~ 222 (460)
|||.+.... +...+.||..|.|||++.|.+| +..-|||++|++||.++....|+.
T Consensus 713 dfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 713 DFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999887544 3457899999999999998886 678999999999999998887764
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=222.66 Aligned_cols=245 Identities=20% Similarity=0.227 Sum_probs=186.7
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeE-EeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGC-CCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~-~~~~~~~~lv~e~ 103 (460)
.|.|.+.+|+|-||.+-++.+ .+.+.+++|-+..... ..++|.+|..---.| .|.||+.-+++ |...+.+++++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 688999999999999999995 4688999998876542 367899998877777 58999988876 5566778899999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc--CCCCeEEccCCCcccCCCCCCc
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGKSY 181 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~--~~~~~kl~DFg~a~~~~~~~~~ 181 (460)
+|.|+|.+-+ ....+-+....+++.|+++||.|+|+++ +||||||.+||||- +..++||||||..+..+.....
T Consensus 104 aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHskn-lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 104 APRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSKN-LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred Cccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhccc-hhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 9999999888 3456888889999999999999999999 99999999999994 4457999999998876655433
Q ss_pred -cCCCcccCcccccc---C--CCCCCCceehHHHHHHHHhhCCCCCCChhhh---hhhhccccccccccccCCCCchhHH
Q 012608 182 -STNLAFTPPEYLRT---G--RVTPESVIYSFGTLLLDLLSGKHIPPSHALD---LIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 182 -~~t~~y~aPE~~~~---~--~~~~~sDi~slG~~l~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
-.+..|.+||.... + ...+.+|+|.||++++.++||+.||...... .+.......-..+..+ .....+++
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P-~~F~~fs~ 258 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALP-KKFNPFSE 258 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCc-hhhcccCH
Confidence 33567899987643 2 2578999999999999999999988643211 0111111111111111 22334667
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+.++..+-|..+|++|.-..++.+
T Consensus 259 ~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 259 KALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred HHHHHHHHhcCCcccccchhHHHHH
Confidence 8899999999999999954444443
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-30 Score=237.75 Aligned_cols=130 Identities=16% Similarity=0.182 Sum_probs=112.5
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-----C---CccceeeeEEeeC---
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----N---NRLTNLLGCCCEG--- 94 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~~iv~~~~~~~~~--- 94 (460)
+|.+.++||=|.|++||++. ..+.+.||+|+.+... .-.+....||.+|+++. | .+||++++.|...
T Consensus 79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred eEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 68999999999999999999 5678899999986532 12456788999999993 3 3599999999754
Q ss_pred -CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE
Q 012608 95 -DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158 (460)
Q Consensus 95 -~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill 158 (460)
..++||+|++ |.+|..+|....-+.++...+.+|++||+.||.|||.+..|||.||||+|||+
T Consensus 158 G~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 158 GQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred CcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 5689999999 78999999876667899999999999999999999998779999999999997
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-29 Score=225.91 Aligned_cols=194 Identities=25% Similarity=0.297 Sum_probs=170.7
Q ss_pred cchhcccCCCCCCeEEEEEEcC-CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 28 ENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
|.+...||.|++|.||++.... ++.+++|.+...... ..+.+.+|++.+++++|+|++++++++...+..++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 3566788999999999999654 899999999876554 56789999999999999999999999998899999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----CC
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 180 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~~ 180 (460)
+++|.+++..... .+++..+..++.+++.++.+||+.+ ++|+||+|.||+++.++.++|+|||.+...... ..
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~-i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLG-IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT 158 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence 9999999864221 2889999999999999999999998 999999999999999999999999988876544 34
Q ss_pred ccCCCcccCcccc-ccCCCCCCCceehHHHHHHHHhhCCCCCCC
Q 012608 181 YSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHIPPS 223 (460)
Q Consensus 181 ~~~t~~y~aPE~~-~~~~~~~~sDi~slG~~l~el~tg~~p~~~ 223 (460)
..++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus 159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 5677889999998 556678899999999999999999999865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-30 Score=233.51 Aligned_cols=251 Identities=19% Similarity=0.214 Sum_probs=196.7
Q ss_pred cchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeC-CeeEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-DERLL 99 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~l 99 (460)
.++...+-+|.||.||.|.+. +.+.|-+|.++....+ ....++.|.-++..++|||+.++.+++.++ ...+.
T Consensus 286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V 365 (563)
T KOG1024|consen 286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFV 365 (563)
T ss_pred eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceE
Confidence 455667789999999999643 3455778887655433 255788999999999999999999998654 56788
Q ss_pred EEEcCCCCCHHhhhhcc------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 100 VAEYMPNETLAKHLFHW------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
++.++.-|+|..++.-. ..+.++..+...++.|++.|++|||+.+ |||.||..+|.+|++.-++||+|=.+++
T Consensus 366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~-ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG-VIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC-cccchhhhhcceehhheeEEeccchhcc
Confidence 89999889999998721 2245667788889999999999999999 9999999999999999999999999888
Q ss_pred cCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCC
Q 012608 174 NSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 174 ~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (460)
..-+.. .-..+..||+||.+....++.++|+||||+++|||+| |+.|+-.-...++.... .+ ..+-.-
T Consensus 445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl----kd-GyRlaQ 519 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL----KD-GYRLAQ 519 (563)
T ss_pred ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH----hc-cceecC
Confidence 654332 2234678999999999999999999999999999988 55555332222111111 11 111223
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
|-++|.++..++..||...|++||+++++..-|..+..
T Consensus 520 P~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 520 PFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred CCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 56788999999999999999999999999998877653
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-30 Score=233.77 Aligned_cols=243 Identities=23% Similarity=0.309 Sum_probs=190.8
Q ss_pred ccchhcccCCCCCCeEEEEEE-c---CCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-E---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.|.++.+||+|+|++||++++ . .++.||+|.+.... ....+..|+++|..+ .+.||+.+.+++..++...+|+
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivl 114 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVL 114 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEe
Confidence 477889999999999999983 3 47899999987655 356799999999999 7999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc-CCCCeEEccCCCcccCC----
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSR---- 176 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~DFg~a~~~~---- 176 (460)
||++.....++.. .++...+..+++.++.||.++|.+| ||||||||+|||.+ ..+.-.|+|||++....
T Consensus 115 p~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~G-IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 115 PYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKNG-IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred cccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhccC-ccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 9999999988884 3668899999999999999999999 99999999999998 55778999999986110
Q ss_pred -------------C-C------------------------------CCccCCCcccCccccccCC-CCCCCceehHHHHH
Q 012608 177 -------------D-G------------------------------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLL 211 (460)
Q Consensus 177 -------------~-~------------------------------~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l 211 (460)
. . ....||++|.|||++...+ .+++.||||.|+++
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 0 0 0124689999999987644 78899999999999
Q ss_pred HHHhhCCCCCCChhhhh--------------------------hhh-c----------ccccc-cccc--------ccCC
Q 012608 212 LDLLSGKHIPPSHALDL--------------------------IRD-R----------NLQML-TDSC--------LEGQ 245 (460)
Q Consensus 212 ~el~tg~~p~~~~~~~~--------------------------~~~-~----------~~~~~-~~~~--------~~~~ 245 (460)
+.++++..||.....+. +.+ . .+..+ ...+ ....
T Consensus 269 Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~ 348 (418)
T KOG1167|consen 269 LSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREI 348 (418)
T ss_pred ehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecc
Confidence 99999999984321100 000 0 00000 0000 0111
Q ss_pred CCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.....+..+.+++.+|++.||.+|.|+++.|+
T Consensus 349 ~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 349 GSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 12234568999999999999999999999998
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=215.23 Aligned_cols=253 Identities=17% Similarity=0.186 Sum_probs=208.2
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.|++.++||+|+||+.+.|+ +-++++||||.-.. .++..++..|.+.++.| ..++|+.++-+..++-...||+|++
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 48899999999999999999 77899999997433 23467899999999999 6899999999888888889999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-----CCeEEccCCCcccCCCC-
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-----GNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-----~~~kl~DFg~a~~~~~~- 178 (460)
|.||.|++. +.+..++..++..++.|++.-++|+|++. +|.|||||+|+||... ..+.++|||+|+...+.
T Consensus 107 -GPSLEDLFD-~CgR~FSvKTV~miA~Qmi~rie~vH~k~-LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 107 -GPSLEDLFD-LCGRRFSVKTVAMIAKQMITRIEYVHEKD-LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred -CcCHHHHHH-HhcCcccHHhHHHHHHHHHHHHHHHHhcc-eeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 799999774 57789999999999999999999999999 9999999999999743 34899999999866533
Q ss_pred ----------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc--cccccccccccCCC
Q 012608 179 ----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR--NLQMLTDSCLEGQF 246 (460)
Q Consensus 179 ----------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~ 246 (460)
.+..||..||+--.+.+...+.+.|+-|||-|+++++-|..||.+--....+.+ .+.......+...+
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~L 263 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVL 263 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHH
Confidence 466899999999999999999999999999999999999999976533222211 12222222333345
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
..++|.++..-+.-.-..+-.+-|..+-+...+..+..
T Consensus 264 c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 264 CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 56678899999999889999999998877766665544
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-28 Score=207.46 Aligned_cols=256 Identities=15% Similarity=0.144 Sum_probs=208.0
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..|+++++||+|+||.+|.|. ..+|..||||+-+... ...++..|..+.+.|+ ...|+.+..+..+.....+||+.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 358999999999999999999 7789999999854433 2457889999999996 47899999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCcccCCC---
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRD--- 177 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~~~~--- 177 (460)
+ |.||.+++.- ....++..+++-++-|++.-++|+|.++ .|||||||+|+|..- -..+.|+|||+++.+.+
T Consensus 93 L-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r~-fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 93 L-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLRN-FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred c-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhhc-cccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 9 7999998865 4567999999999999999999999999 999999999999963 35689999999987643
Q ss_pred --------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh--ccccccccccccCCCC
Q 012608 178 --------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD--RNLQMLTDSCLEGQFT 247 (460)
Q Consensus 178 --------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 247 (460)
.....||..|.+--.+.+...+.+.|+-|+|.++.++.-|..||.+-....-.+ ..+....-..+...+.
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC 249 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLC 249 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHh
Confidence 345678999998888877778999999999999999999999997653321111 1111112222333455
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
...|.++.-.+.-|-...-++-|...-+.+.+..+....
T Consensus 250 ~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l 288 (341)
T KOG1163|consen 250 KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL 288 (341)
T ss_pred CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence 677889999999999999999999988888777666554
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=257.22 Aligned_cols=190 Identities=16% Similarity=0.175 Sum_probs=139.5
Q ss_pred cCCC-CccceeeeEE-------eeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc
Q 012608 78 QLRN-NRLTNLLGCC-------CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 149 (460)
Q Consensus 78 ~l~h-~~iv~~~~~~-------~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~ 149 (460)
.++| +||+.+++++ .....++.++|+++ ++|.+++.. ....+++..++.++.||+.||.|||++| |+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-IvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQG-IVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhCC-eeec
Confidence 4455 5788888877 22345778899885 799999964 2456999999999999999999999999 9999
Q ss_pred cccCCcEEEcC-------------------CCCeEEccCCCcccCCCC--------------------CCccCCCcccCc
Q 012608 150 DLNAYRILFDE-------------------DGNPRLSTFGLMKNSRDG--------------------KSYSTNLAFTPP 190 (460)
Q Consensus 150 Dikp~Nill~~-------------------~~~~kl~DFg~a~~~~~~--------------------~~~~~t~~y~aP 190 (460)
||||+|||++. ++.+|++|||+++..... ....+|+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 455677777776532110 013467889999
Q ss_pred cccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCC
Q 012608 191 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 270 (460)
Q Consensus 191 E~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp 270 (460)
|++.+..++.++|||||||++|||++|..|+...... .... .....++ ... ...+....++.+||+.+|.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~-~~~~-~~~~~~~----~~~-~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT-MSSL-RHRVLPP----QIL-LNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH-HHHH-HHhhcCh----hhh-hcCHHHHHHHHHhCCCChhhCc
Confidence 9999889999999999999999999988765432111 1100 0011111 111 1124567889999999999999
Q ss_pred ChhHHHH
Q 012608 271 NPKSLVT 277 (460)
Q Consensus 271 s~~~il~ 277 (460)
++.++++
T Consensus 258 s~~eil~ 264 (793)
T PLN00181 258 SMSELLQ 264 (793)
T ss_pred ChHHHhh
Confidence 9999987
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-26 Score=219.69 Aligned_cols=261 Identities=16% Similarity=0.152 Sum_probs=202.8
Q ss_pred hcCCcccchhcccCCCCCCeEEEEEEcC--CcEEEEEEecCCCCCCHHHHHHHHHHHhcCCC----CccceeeeEE-eeC
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGKLEN--QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN----NRLTNLLGCC-CEG 94 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~~iv~~~~~~-~~~ 94 (460)
..+. .|.+.+.||+|+||.||.+.... ...+|+|............+..|+.++..+.. ++++.+++.+ ..+
T Consensus 15 ~~~~-~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~ 93 (322)
T KOG1164|consen 15 KVNT-RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE 93 (322)
T ss_pred cccc-ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCC
Confidence 3344 79999999999999999999544 35789998766544433478899999999963 6899999998 477
Q ss_pred CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-----CCeEEccC
Q 012608 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-----GNPRLSTF 169 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-----~~~kl~DF 169 (460)
...++||+.+ |.+|.++......+.++..++.+|+.|++.+|+++|+.| ++||||||+|++++.. ..+.|.||
T Consensus 94 ~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G-~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 94 DFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG-FIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred ceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC-cccCCcCHHHeeecCCCCcccceEEEEec
Confidence 7889999999 799999886555678999999999999999999999999 9999999999999855 35899999
Q ss_pred CCcc--cCCC------------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc
Q 012608 170 GLMK--NSRD------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 235 (460)
Q Consensus 170 g~a~--~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 235 (460)
|+++ .... ...+.||..|+++.++.+...+.+.|+||++.++.+++.|..||............ .
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~-~ 250 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKF-E 250 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHH-H
Confidence 9998 3110 11345899999999999999999999999999999999999887543211111100 0
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
...............+.++..+...+-..+...+|....+...|.......
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 251 KDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 000000000023345577888888888899999999999999887776554
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8e-28 Score=207.86 Aligned_cols=254 Identities=19% Similarity=0.275 Sum_probs=203.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+|+..+++-+|.+...|..|+|++. |..++.|+++...... .+.|..|.-.|+-+.||||..+++.|.....+.++.
T Consensus 188 d~~~lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 188 DVSSLNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred chhhhhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence 4566778888999999999999985 4456678876554333 468999999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccc-cccCCcEEEcCCCCeEEccCCCcccCCCCCC
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 180 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~-Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~ 180 (460)
.|||.|||...+....+-.++..++.+++.++++|++|||+..+++-| -+.+..|++|++.+.+|+ .+-.+..-+...
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~g 345 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVG 345 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccc
Confidence 999999999999876666677889999999999999999998777776 899999999999887765 222222223333
Q ss_pred ccCCCcccCccccccCCCC---CCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVT---PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~---~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
...++.||+||.++..+-+ .++|+|||.+++|||.|...||.....-....+ +.-..+...+|+..+..+.++
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk----ialeglrv~ippgis~hm~kl 421 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK----IALEGLRVHIPPGISRHMNKL 421 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh----hhhccccccCCCCccHHHHHH
Confidence 4457899999999876633 489999999999999999999865433222211 122234456778888999999
Q ss_pred HHHHcccCCCCCCChhHHHHHhcccc
Q 012608 258 ASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
+.-|...||.+||.+..++-.|+...
T Consensus 422 m~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 422 MNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999998887653
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-27 Score=202.52 Aligned_cols=166 Identities=18% Similarity=0.149 Sum_probs=126.5
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCccCCCc
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA 186 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~~t~~ 186 (460)
|||.+++.. .+..+++..++.|+.|++.||.|||+.+ ||+|||++.++.+++ ||++....... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689998864 2456999999999999999999999987 999999999999999 99987655433 367899
Q ss_pred ccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh-hhhhcccccccccccc-CCCCchhHH--HHHHHHHHHc
Q 012608 187 FTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLE-GQFTDDDGT--ELVRLASRCL 262 (460)
Q Consensus 187 y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~l~~li~~~l 262 (460)
|||||++.+..++.++|||||||++|||+||+.||...... ................ ...+...+. .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999988543211 1111111111110000 011223333 6999999999
Q ss_pred ccCCCCCCChhHHHHHhcccc
Q 012608 263 QYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 263 ~~~p~~Rps~~~il~~L~~~~ 283 (460)
..+|.+||++.++++.+....
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hcccccccCHHHHHHHHHHHH
Confidence 999999999999999775543
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=211.88 Aligned_cols=167 Identities=17% Similarity=0.066 Sum_probs=128.3
Q ss_pred cccchhcccCCCCCCeEEEEEEc--CCcEEEEEEecCCCC---C--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE--NQRRIAVKRFNRMAW---P--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~---~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
..|.+.+.||+|+||+||+|... +++.||||++..... . ..+.+.+|+++|++++|+||+..+.. .+..+
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~ 94 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDG 94 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcE
Confidence 45888999999999999999853 578889998753311 1 24569999999999999999853322 24579
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc-cCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Di-kp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
+||||++|++|.... . .. ...++.|++.+|.|||+.| |+|||| ||+|||++.++.+||+|||+++....
T Consensus 95 LVmE~~~G~~L~~~~---~---~~---~~~~~~~i~~aL~~lH~~g-IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 95 LVRGWTEGVPLHLAR---P---HG---DPAWFRSAHRALRDLHRAG-ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred EEEEccCCCCHHHhC---c---cc---hHHHHHHHHHHHHHHHHCC-CeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 999999999997321 1 11 1467899999999999999 999999 99999999999999999999986543
Q ss_pred CC------------CccCCCcccCccccccCC------CCCCCcee
Q 012608 178 GK------------SYSTNLAFTPPEYLRTGR------VTPESVIY 205 (460)
Q Consensus 178 ~~------------~~~~t~~y~aPE~~~~~~------~~~~sDi~ 205 (460)
.. ...+++.|++||.+.... .+..+|-|
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 22 234567899999885432 33456766
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-23 Score=197.98 Aligned_cols=247 Identities=23% Similarity=0.304 Sum_probs=194.4
Q ss_pred cchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCC-ccceeeeEEeeCCeeEEEEEc
Q 012608 28 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNN-RLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~e~ 103 (460)
|++.+.||.|+||.||.+... ..+++|.+....... ...+.+|+.+++.+.|+ +|+.+.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 567888999999999999975 789999987655443 67899999999999888 799999999777778999999
Q ss_pred CCCCCHHhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-CeEEccCCCcccCCC----
Q 012608 104 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD---- 177 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~DFg~a~~~~~---- 177 (460)
+.|+++.+++..... ..++......++.|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.+.....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~-~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG-IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977653211 26889999999999999999999999 99999999999999888 699999999875432
Q ss_pred ------CCCccCCCcccCcccccc---CCCCCCCceehHHHHHHHHhhCCCCCCChhh----hhhhhccccccccccccC
Q 012608 178 ------GKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 178 ------~~~~~~t~~y~aPE~~~~---~~~~~~sDi~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~ 244 (460)
.....+|..|++||.+.+ ...+...|+||+|++++++++|..|+..... ............ +....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPT-PSLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCC-ccccc
Confidence 245678999999999987 5688899999999999999999988655432 111111111110 00011
Q ss_pred CCC----chhHHHHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 245 QFT----DDDGTELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 245 ~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
... ......+.+++..|+..+|..|.+.......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111 1223578999999999999999888776653
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=189.78 Aligned_cols=169 Identities=12% Similarity=0.080 Sum_probs=132.7
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHH---------HHHHHHHHhcCCCCccceeeeEEeeC--
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQ---------FLEEARSVGQLRNNRLTNLLGCCCEG-- 94 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~~~-- 94 (460)
.+|++++.+|.|+||.||+... ++..+|||++.......... +.+|+..+.++.||+|+.+.+++...
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred CceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 3588999999999999999765 57789999997665444332 68999999999999999999886532
Q ss_pred ------CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEcc
Q 012608 95 ------DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 168 (460)
Q Consensus 95 ------~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 168 (460)
+..+++|||++|.+|.+... +++ ....+++.+|..+|+.| ++|||+||+||+++.+| ++|+|
T Consensus 110 ~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g-i~H~Dikp~Nili~~~g-i~liD 177 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG-MVSGDPHKGNFIVSKNG-LRIID 177 (232)
T ss_pred ccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC-CccCCCChHHEEEeCCC-EEEEE
Confidence 35789999999999988641 333 24569999999999999 99999999999999888 99999
Q ss_pred CCCcccCCCCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHh
Q 012608 169 FGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215 (460)
Q Consensus 169 Fg~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~ 215 (460)
||............ .......+..++|+||||+++..+.
T Consensus 178 fg~~~~~~e~~a~d--------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 178 LSGKRCTAQRKAKD--------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCcccccchhhHH--------HHHHHhHhcccccccceeEeehHHH
Confidence 99876543222110 0223344667999999999988664
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-25 Score=223.06 Aligned_cols=244 Identities=17% Similarity=0.116 Sum_probs=185.0
Q ss_pred hhcccCCCCCCeEEEEE-EcCCcEEEEEEecCC--CCCC----HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 30 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM--AWPD----PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
....+|.|++|.|+... ....+..+.|..... .... ...+..|..+-..|+|||++..+..+.+......+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 45667999999887776 334555555544311 1111 1226678888888999999888887777666666699
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
||++ +|..++.. .+.++...+-.++.|++.|+.|+|+.| |.|||+|++|+++..+|.+||+|||.+..+...
T Consensus 402 ~~~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~G-iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 402 YCPY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSMG-LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred cccH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhcC-ceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 9998 99998863 357888999999999999999999999 999999999999999999999999988765422
Q ss_pred ----CCccCCCcccCccccccCCCCC-CCceehHHHHHHHHhhCCCCCCChhhhhh---hhccccccccccccCCCCchh
Q 012608 179 ----KSYSTNLAFTPPEYLRTGRVTP-ESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~~~~~~-~sDi~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 250 (460)
....|+..|+|||++.+..+++ ..||||.|+++..|++|+.||........ ................+...+
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 557 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL 557 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc
Confidence 3457889999999999988876 79999999999999999988754322211 111111111111112233456
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+...+.+|.+||+.+|.+|.|+.+|++
T Consensus 558 p~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 558 PRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hhhHHHHHHHHccCChhheecHHHHhh
Confidence 788999999999999999999999998
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.1e-24 Score=184.72 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=110.8
Q ss_pred hhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC---------H-----------------HHHHHHHHHHhcCCCCc
Q 012608 30 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD---------P-----------------RQFLEEARSVGQLRNNR 83 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------~-----------------~~~~~E~~~l~~l~h~~ 83 (460)
+.+.||+|+||.||+|...+|+.||||+++...... . .....|++++.++.+++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 1 INGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357899999999999997789999999997543211 0 12235999999998887
Q ss_pred cceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccccccCCcEEEcCCC
Q 012608 84 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNAYRILFDEDG 162 (460)
Q Consensus 84 iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~~iiH~Dikp~Nill~~~~ 162 (460)
+.....+.. ...++||||++|+++..... ..++++...+..++.|++.+|.++ |+.| |+||||||+|||++ ++
T Consensus 81 v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~g-iiHrDlkP~NIli~-~~ 154 (190)
T cd05147 81 IPCPEPILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDCR-LVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCCcEEEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEE-CC
Confidence 754433322 22389999999877765432 345788999999999999999999 6888 99999999999998 47
Q ss_pred CeEEccCCCcccCC
Q 012608 163 NPRLSTFGLMKNSR 176 (460)
Q Consensus 163 ~~kl~DFg~a~~~~ 176 (460)
.++|+|||++....
T Consensus 155 ~v~LiDFG~a~~~~ 168 (190)
T cd05147 155 KLYIIDVSQSVEHD 168 (190)
T ss_pred cEEEEEccccccCC
Confidence 89999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=177.67 Aligned_cols=142 Identities=15% Similarity=0.201 Sum_probs=113.4
Q ss_pred hhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC---------------------C-----HHHHHHHHHHHhcCCCCc
Q 012608 30 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP---------------------D-----PRQFLEEARSVGQLRNNR 83 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~~ 83 (460)
+.+.||+|++|.||+|...+|+.||||+++..... . ...+.+|.+.+.++.|++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 35789999999999999768999999998765321 0 122468999999999998
Q ss_pred cceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCC
Q 012608 84 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDG 162 (460)
Q Consensus 84 iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~ 162 (460)
|.....+... ..++||||++|+++..... ....++......++.|++.++.++|+ .| |+||||||+||+++ ++
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~g-ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEAG-LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCChhhEEEE-CC
Confidence 7555544333 2489999999886543322 23567888999999999999999999 88 99999999999999 88
Q ss_pred CeEEccCCCcccCCC
Q 012608 163 NPRLSTFGLMKNSRD 177 (460)
Q Consensus 163 ~~kl~DFg~a~~~~~ 177 (460)
.++|+|||++.....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999886544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-22 Score=184.81 Aligned_cols=230 Identities=20% Similarity=0.187 Sum_probs=151.1
Q ss_pred cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCC----------CccceeeeEEe-
Q 012608 28 ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRN----------NRLTNLLGCCC- 92 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h----------~~iv~~~~~~~- 92 (460)
....+.||.|+++.||.+++. +|+.+|+|++..... ...+.+.+|.-....+.+ -.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 345677899999999999954 599999998854432 225677777766666432 12222233222
Q ss_pred --------eC---C-----eeEEEEEcCCCCCHHhhhhc---cCCC--CCCHHHHHHHHHHHHHHHHHHHhCCCcccccc
Q 012608 93 --------EG---D-----ERLLVAEYMPNETLAKHLFH---WETH--PMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 151 (460)
Q Consensus 93 --------~~---~-----~~~lv~e~~~g~sL~~~~~~---~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Di 151 (460)
.. + +.+++|+-+. ++|.+++.. .... .+.......+..|+++.+++||+.| ++|+||
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G-lVHgdi 171 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG-LVHGDI 171 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EEEST-
T ss_pred cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc-eEeccc
Confidence 11 1 2367888886 788887642 1111 2334455677899999999999999 999999
Q ss_pred cCCcEEEcCCCCeEEccCCCcccCCCCCC-ccCCCcccCcccccc--------CCCCCCCceehHHHHHHHHhhCCCCCC
Q 012608 152 NAYRILFDEDGNPRLSTFGLMKNSRDGKS-YSTNLAFTPPEYLRT--------GRVTPESVIYSFGTLLLDLLSGKHIPP 222 (460)
Q Consensus 152 kp~Nill~~~~~~kl~DFg~a~~~~~~~~-~~~t~~y~aPE~~~~--------~~~~~~sDi~slG~~l~el~tg~~p~~ 222 (460)
+|+|++++.+|.++|+||+.....+.... ...+..|.+||.... -.++.+.|.|+||+++|.|+||..||.
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 99999999999999999998776655433 345678999997643 247889999999999999999999987
Q ss_pred ChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCC
Q 012608 223 SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269 (460)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 269 (460)
.......... .-..+. ++|..+..+|..+|+.||.+|
T Consensus 252 ~~~~~~~~~~---------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 252 LSSPEADPEW---------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CCGGGSTSGG---------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCccccccc---------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 5533222111 112334 778999999999999999987
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=168.72 Aligned_cols=180 Identities=17% Similarity=0.152 Sum_probs=137.7
Q ss_pred hhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC----HHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcC
Q 012608 30 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD----PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
+...|++|+||+||.+.. .+.+++.+.+.....-. ...+.+|+++|++| +|++|++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 456789999999997765 67888888876654321 22588999999999 56889999886 3469999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccc-cCCcEEEcCCCCeEEccCCCcccCCCCCCc--
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL-NAYRILFDEDGNPRLSTFGLMKNSRDGKSY-- 181 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Di-kp~Nill~~~~~~kl~DFg~a~~~~~~~~~-- 181 (460)
.|.+|.+... .. ...++.|++.+|.++|+.| |+|||| ||+|||++.++.++|+|||++.........
T Consensus 81 ~G~~L~~~~~---~~------~~~~~~qi~~~L~~lH~~G-IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPP---RG------DLAYFRAARRLLQQLHRCG-VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhh---hh------hHHHHHHHHHHHHHHHHCc-CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 9999976442 11 1357789999999999999 999999 799999999999999999999865433210
Q ss_pred ---------------cCCCcccCccccccC-CCC-CCCceehHHHHHHHHhhCCCCCCCh
Q 012608 182 ---------------STNLAFTPPEYLRTG-RVT-PESVIYSFGTLLLDLLSGKHIPPSH 224 (460)
Q Consensus 182 ---------------~~t~~y~aPE~~~~~-~~~-~~sDi~slG~~l~el~tg~~p~~~~ 224 (460)
..++.+++|+....- ..+ .+.+.++.|+.+|.++|+..+..++
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 135667777654322 233 4667789999999999999776543
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-22 Score=205.06 Aligned_cols=241 Identities=19% Similarity=0.223 Sum_probs=176.8
Q ss_pred ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC-CH---HHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-DP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~---~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
++...+.||++-|=.|.+++++.|. |+||++-..... .. .+...|++ ...++|||++++.-+-..+.-.|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5677889999999999999988887 889998554422 23 34444555 445589999999888777777889999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC--CCC--
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS--RDG-- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~--~~~-- 178 (460)
|+. .+|.|++. .+.-+...+.+-|+.|++.||..+|..| |+|||||.+||||+..+.+.|+||...+.. +.+
T Consensus 102 yvk-hnLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~g-VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 102 YVK-HNLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKLG-VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHh-hhhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHcC-ccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 996 79999995 2233566778889999999999999999 999999999999999999999999865532 111
Q ss_pred CC-------ccCCCcccCccccccC----------C-CCCCCceehHHHHHHHHhhC-CCCCCChhhhhhhhcccccccc
Q 012608 179 KS-------YSTNLAFTPPEYLRTG----------R-VTPESVIYSFGTLLLDLLSG-KHIPPSHALDLIRDRNLQMLTD 239 (460)
Q Consensus 179 ~~-------~~~t~~y~aPE~~~~~----------~-~~~~sDi~slG~~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~ 239 (460)
.. ...-..|.|||.+... . .+++-||||+||++.||++- ++||.-.-.-..+... .....
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e 256 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPE 256 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHH
Confidence 11 1223579999987431 2 67899999999999999886 5555332222222221 11111
Q ss_pred ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHH
Q 012608 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTA 278 (460)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 278 (460)
..+. .+ .+..++.++..|++.||..|.++++.|+.
T Consensus 257 ~~Le-~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 257 QLLE-KI---EDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHH-hC---cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 1111 11 12468999999999999999999999976
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-22 Score=194.58 Aligned_cols=232 Identities=18% Similarity=0.198 Sum_probs=189.3
Q ss_pred ccCCCCCCeEEEEEE----cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEEEcCC
Q 012608 33 EHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.+|.|+||.|++++. +.|.-+|+|+++..... .......|..++..++ ||.++.++-.+..+...++++++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 369999999998762 34778899988654322 2225667888999996 9999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCccCCC
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 185 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~~t~ 185 (460)
||.|...+. ....+++.....+...++.++.++|+.+ +++||+|++||+++.+|.+++.|||+++..-.....+||.
T Consensus 81 gg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~-iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~ 157 (612)
T KOG0603|consen 81 GGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLG-IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTY 157 (612)
T ss_pred cchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhH-HHHhcccccceeecccCccccCCchhhhHhHhhhhcccch
Confidence 999988775 3456777888888899999999999999 9999999999999999999999999998877666669999
Q ss_pred cccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccC
Q 012608 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265 (460)
Q Consensus 186 ~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 265 (460)
.|||||++. ....++|.||||++.++|+||..||.......+.. .....|...+....+++..++..+
T Consensus 158 eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~----------~~~~~p~~l~~~a~~~~~~l~~r~ 225 (612)
T KOG0603|consen 158 EYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILK----------AELEMPRELSAEARSLFRQLFKRN 225 (612)
T ss_pred hhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhh----------hccCCchhhhHHHHHHHHHHHhhC
Confidence 999999998 56779999999999999999999987732221111 112356677889999999999999
Q ss_pred CCCCCCh--hHHHHHh
Q 012608 266 PRERPNP--KSLVTAL 279 (460)
Q Consensus 266 p~~Rps~--~~il~~L 279 (460)
|..|--. ..+.+..
T Consensus 226 p~nrLg~~~~~~~eik 241 (612)
T KOG0603|consen 226 PENRLGAGPDGVDEIK 241 (612)
T ss_pred HHHHhccCcchhHHHh
Confidence 9999533 4444433
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.6e-21 Score=167.37 Aligned_cols=133 Identities=15% Similarity=0.141 Sum_probs=105.5
Q ss_pred cccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-----CCCccceeeeEEeeCC---eeE-EEEE
Q 012608 32 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-----RNNRLTNLLGCCCEGD---ERL-LVAE 102 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~~iv~~~~~~~~~~---~~~-lv~e 102 (460)
..||+|+||.||. ...++.. +||++........+.+.+|+.+++.+ +||||+++++++..+. ..+ +|+|
T Consensus 8 ~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 5679999999996 3234444 69988765555567899999999999 5799999999998763 333 7899
Q ss_pred c--CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCcccccccCCcEEEcC----CCCeEEccCCCc
Q 012608 103 Y--MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQAL-EYCTSKGRALYHDLNAYRILFDE----DGNPRLSTFGLM 172 (460)
Q Consensus 103 ~--~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~~iiH~Dikp~Nill~~----~~~~kl~DFg~a 172 (460)
| ++++||.+++.. +.+++. ..++.|++.++ +|||+++ |+||||||+|||++. +++++|+||+.+
T Consensus 86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~-IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNR-IVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCC-EeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 9 667999999953 346555 35688888888 9999999 999999999999973 347999995533
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-21 Score=170.40 Aligned_cols=111 Identities=24% Similarity=0.291 Sum_probs=106.7
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
....++.++..|+.+++.++|++|+..|++||+++|+ ++.+|.|||.+|.++|+++.|++||+.||.+||.+.++|-++
T Consensus 77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~RL 155 (304)
T KOG0553|consen 77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGRL 155 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHHH
Confidence 4467899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
|.+|+.+|++++|+++|++||.|||++...|.
T Consensus 156 G~A~~~~gk~~~A~~aykKaLeldP~Ne~~K~ 187 (304)
T KOG0553|consen 156 GLAYLALGKYEEAIEAYKKALELDPDNESYKS 187 (304)
T ss_pred HHHHHccCcHHHHHHHHHhhhccCCCcHHHHH
Confidence 99999999999999999999999999986554
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-20 Score=181.08 Aligned_cols=207 Identities=22% Similarity=0.323 Sum_probs=160.2
Q ss_pred HhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCc-ccccccCC
Q 012608 76 VGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA-LYHDLNAY 154 (460)
Q Consensus 76 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i-iH~Dikp~ 154 (460)
|+.+.|.|+.+++|.+..+...+.|.+||..|+|.|.+.. ....+++-....++++|+.||.|+|+.. | .|+.++++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP-IGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc-ceeeeeeccc
Confidence 4678999999999999999999999999999999999965 4567888889999999999999999986 5 89999999
Q ss_pred cEEEcCCCCeEEccCCCcccCCCC------CCccCCCcccCccccccCC-------CCCCCceehHHHHHHHHhhCCCCC
Q 012608 155 RILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGR-------VTPESVIYSFGTLLLDLLSGKHIP 221 (460)
Q Consensus 155 Nill~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~-------~~~~sDi~slG~~l~el~tg~~p~ 221 (460)
|.+++..+.+||+|||+....... ....-...|.|||.+.+.. .+.++||||||++++|+++.+.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999997766421 1112245799999987631 467899999999999999999998
Q ss_pred CChhhhhh----hhccccccccccccCCCC--chhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 222 PSHALDLI----RDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 222 ~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
........ ...... .......+... ...++++..++..||..+|..||+++++...++.+.+.
T Consensus 159 ~~~~~~~~~~eii~~~~~-~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKK-GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccccccCChHHHHHHHHh-cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 65322111 111000 01111111111 14455799999999999999999999999987777543
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-20 Score=168.13 Aligned_cols=191 Identities=17% Similarity=0.211 Sum_probs=144.2
Q ss_pred CCCccceeeeEEee---------------------------CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHH
Q 012608 80 RNNRLTNLLGCCCE---------------------------GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH 132 (460)
Q Consensus 80 ~h~~iv~~~~~~~~---------------------------~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~q 132 (460)
.|||||++.+.|.+ +...|+||...+ .||.+++. ....+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHh---cCCCchHHHHHHHHH
Confidence 59999999987643 234789998887 89999994 455666777888999
Q ss_pred HHHHHHHHHhCCCcccccccCCcEEE--cCCC--CeEEccCCCcccCC----------CCCCccCCCcccCccccccCC-
Q 012608 133 LAQALEYCTSKGRALYHDLNAYRILF--DEDG--NPRLSTFGLMKNSR----------DGKSYSTNLAFTPPEYLRTGR- 197 (460)
Q Consensus 133 i~~~l~~lH~~~~iiH~Dikp~Nill--~~~~--~~kl~DFg~a~~~~----------~~~~~~~t~~y~aPE~~~~~~- 197 (460)
+++|+.|||.+| |.|||+|++|||+ ++++ .+.|+|||++---. ......|...-||||+....+
T Consensus 350 lLEav~hL~~hg-vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKHG-VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHcc-chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 999999999999 9999999999999 3443 47899999754221 123445678899999985432
Q ss_pred ----C-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCCh
Q 012608 198 ----V-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 272 (460)
Q Consensus 198 ----~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 272 (460)
. -.++|.|+.|.+.||+++...||.......+....+++-. .+-++..+++.+.+++..+|+.||++|++.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~q----LPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQ----LPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhh----CCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 1 2489999999999999999999987544333333332221 123566778899999999999999999887
Q ss_pred hHHHHHh
Q 012608 273 KSLVTAL 279 (460)
Q Consensus 273 ~~il~~L 279 (460)
.-.-..|
T Consensus 505 ~iAANvl 511 (598)
T KOG4158|consen 505 NIAANVL 511 (598)
T ss_pred cHHHhHH
Confidence 6554443
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-19 Score=164.10 Aligned_cols=153 Identities=14% Similarity=0.128 Sum_probs=116.8
Q ss_pred HHHHHhcCCcccchhcccCCCCCCeEEEEE--EcCCcEEEEEEecCCCCC-------------------C-----HHHHH
Q 012608 17 QLKNATSGFAVENIVSEHGEKAPNVVYKGK--LENQRRIAVKRFNRMAWP-------------------D-----PRQFL 70 (460)
Q Consensus 17 ~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~-------------------~-----~~~~~ 70 (460)
++..-.+.=..|.+.+.||.|++|.||+|. ..+|+.||+|+++..... + ...+.
T Consensus 19 ~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (237)
T smart00090 19 ALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAE 98 (237)
T ss_pred HHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHH
Confidence 333333333457899999999999999998 567999999998754311 0 12357
Q ss_pred HHHHHHhcCCCC--ccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCccc
Q 012608 71 EEARSVGQLRNN--RLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 148 (460)
Q Consensus 71 ~E~~~l~~l~h~--~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH 148 (460)
+|+.++.++.+. .++.+++. ...++||||++|.+|..... ....+.......++.|++.++.+||+.|+++|
T Consensus 99 ~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH 172 (237)
T smart00090 99 KEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKEGELVH 172 (237)
T ss_pred HHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhcCCEEe
Confidence 899999999753 34455543 23589999999988876542 23455666778999999999999999977999
Q ss_pred ccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 149 HDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 149 ~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
+||||+||+++ ++.++|+|||.+....
T Consensus 173 ~Dikp~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 173 GDLSEYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred CCCChhhEEEE-CCCEEEEEChhhhccC
Confidence 99999999999 8899999999877543
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=159.97 Aligned_cols=134 Identities=17% Similarity=0.199 Sum_probs=113.7
Q ss_pred cccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--------HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 32 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+.||+|++|.||+|.. .|..|++|+........ ...+.+|+.++..+.|++|+....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999987 67789999876543221 23578899999999999988877777777888999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
++|++|.+.+... .. ....++.+++.+|.++|+.+ ++|+|++|.|||++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~-i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAG-IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCC-cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988531 12 78889999999999999999 99999999999999 78899999998764
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-19 Score=187.18 Aligned_cols=238 Identities=18% Similarity=0.164 Sum_probs=175.0
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC---CCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e 102 (460)
..+.|-+.+|.|+||.||.|...+|+.||||+-+....- +|.-=.+++.+|+ -+.|..+...+.-.+.-++|+|
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e 774 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSE 774 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence 457788999999999999999878999999997765532 2222334555555 3445555555556677799999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-------CCCeEEccCCCcccC
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------DGNPRLSTFGLMKNS 175 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-------~~~~kl~DFg~a~~~ 175 (460)
|.+.|||.+++. ..+.+++..+..++.|++..++.||..+ |||+||||+|+||.. .--++|+|||.+..+
T Consensus 775 y~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~-IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 775 YSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG-IIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred ccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc-eecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 999999999997 5678999999999999999999999999 999999999999942 234899999987543
Q ss_pred ---CCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 176 ---RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 176 ---~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
.+. ...++|-.+-.+|...|.+.+...|.|.|..+++.|+.|+..- ..++........ ++.-
T Consensus 852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------~~~g~~~~~~~~-----~~Ry 919 (974)
T KOG1166|consen 852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------VKNGSSWMVKTN-----FPRY 919 (974)
T ss_pred eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------hcCCcceecccc-----chhh
Confidence 333 2345688899999999999999999999999999999998421 111111111111 1111
Q ss_pred hH-HHHHHHHHHHcccCCCCC--CChhHHHHHhcccc
Q 012608 250 DG-TELVRLASRCLQYEPRER--PNPKSLVTALSPLQ 283 (460)
Q Consensus 250 ~~-~~l~~li~~~l~~~p~~R--ps~~~il~~L~~~~ 283 (460)
.. .-...|...+|. |+.+ |...++...++.+.
T Consensus 920 ~~~~~W~~~F~~lLN--~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 920 WKRDMWNKFFDLLLN--PDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred hhHHHHHHHHHHHhC--cCcccchhHHHHHHHHHHHH
Confidence 11 234567777887 5555 67777776666554
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=154.87 Aligned_cols=129 Identities=18% Similarity=0.252 Sum_probs=106.4
Q ss_pred cCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--------HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 34 HGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 34 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
||+|+||.||+|.. +|..|++|......... ...+.+|++++..+.|+++.....++...+..++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 79999999999985 67889999865432211 2567789999999998876655555566677899999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
|++|.+.+.. .. . .++.+++.+|.++|+.+ ++|+|++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~--~~-~------~~~~~i~~~l~~lH~~g-i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEE--GN-D------ELLREIGRLVGKLHKAG-IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhh--cH-H------HHHHHHHHHHHHHHHCC-eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999988742 11 1 78999999999999999 99999999999999 88999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-18 Score=153.61 Aligned_cols=137 Identities=15% Similarity=0.155 Sum_probs=109.3
Q ss_pred cchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC----------------------CHHHHHHHHHHHhcCCCCc--
Q 012608 28 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP----------------------DPRQFLEEARSVGQLRNNR-- 83 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~h~~-- 83 (460)
|.+.+.||.|+||.||++...+|+.||||++...... ....+.+|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 6778889999999999999878999999987643211 0123678899999998774
Q ss_pred cceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC
Q 012608 84 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 163 (460)
Q Consensus 84 iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~ 163 (460)
++..++ .+..++||||++|++|.+... ......++.+++.++.++|+.+ ++|+||||+||++++++.
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~g-i~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHG-IIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCC-CCcCCCCcccEEEcCCCc
Confidence 444444 244589999999999976542 0345678899999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCC
Q 012608 164 PRLSTFGLMKNSRD 177 (460)
Q Consensus 164 ~kl~DFg~a~~~~~ 177 (460)
++|+|||++.....
T Consensus 164 ~~liDfg~~~~~~~ 177 (198)
T cd05144 164 IYIIDWPQMVSTDH 177 (198)
T ss_pred EEEEECCccccCCC
Confidence 99999999865443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-19 Score=180.81 Aligned_cols=202 Identities=20% Similarity=0.194 Sum_probs=148.1
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
++++.|+.+..|+||.||.+++. +.+++|+|+ +.+. -+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~-----lilRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQN-----LILRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccc-----hhhhc--cccccCCccee-------------------
Confidence 45677888899999999999864 478899843 3322 11111 23333334333
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC--------
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-------- 176 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~-------- 176 (460)
|+-...++ ..++++.+. +.+++|||+.+ |+|||+||+|.+|+.-|.+|+.|||+++...
T Consensus 136 --gDc~tllk--~~g~lPvdm--------vla~Eylh~yg-ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 136 --GDCATLLK--NIGPLPVDM--------VLAVEYLHSYG-IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred --chhhhhcc--cCCCCcchh--------hHHhHhhccCC-eecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence 33333343 224444332 67999999999 9999999999999999999999999876421
Q ss_pred -----------CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCC
Q 012608 177 -----------DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245 (460)
Q Consensus 177 -----------~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (460)
.....+||+.|.|||++....|+...|.|++|+++|+++-|+.||.++..+.+.......... ..+
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~---wpE 279 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---WPE 279 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc---ccc
Confidence 123457899999999999899999999999999999999999999998666555443332221 112
Q ss_pred CCchhHHHHHHHHHHHcccCCCCCC
Q 012608 246 FTDDDGTELVRLASRCLQYEPRERP 270 (460)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~~p~~Rp 270 (460)
-....+++.+.++.++|+.+|..|-
T Consensus 280 ~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 280 EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 2456678999999999999999993
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-19 Score=170.48 Aligned_cols=167 Identities=25% Similarity=0.376 Sum_probs=126.1
Q ss_pred eeEEEEEcCCCCCHHhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 96 ERLLVAEYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
..||.|++|.-.+|.+++.+.. ....++.....++.|+..++.| ++ .+|+|+||.||+...+..+||.|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~-~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG-LIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc-chhhhccccccccccchhhhhhhhhheee
Confidence 4789999999999999997433 3456778889999999999999 87 99999999999999999999999999775
Q ss_pred CCCC----------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccC
Q 012608 175 SRDG----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 175 ~~~~----------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (460)
.... ....||..||+||.+.+..|+.++||||||++++|+++- |.... ........+.+..+++
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~---f~T~~---er~~t~~d~r~g~ip~ 479 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ---FSTQF---ERIATLTDIRDGIIPP 479 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH---hccHH---HHHHhhhhhhcCCCCh
Confidence 5433 245689999999999999999999999999999999982 21111 1111111222222221
Q ss_pred CCCchhHHHHHHHHHHHcccCCCCCCChh
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRERPNPK 273 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 273 (460)
.+..+. ++-..|+.+++...|.+||++.
T Consensus 480 ~~~~d~-p~e~~ll~~lls~~p~~RP~~~ 507 (516)
T KOG1033|consen 480 EFLQDY-PEEYTLLQQLLSPSPEERPSAI 507 (516)
T ss_pred HHhhcC-cHHHHHHHHhcCCCcccCchHH
Confidence 111122 3456799999999999999443
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.2e-18 Score=172.41 Aligned_cols=133 Identities=20% Similarity=0.206 Sum_probs=108.5
Q ss_pred chhcccCCCCCCeEEEEEEcCCcEEEEEEe-cCC-CCC------CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 29 NIVSEHGEKAPNVVYKGKLENQRRIAVKRF-NRM-AWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~-~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
...+.||+|+||+||++.+..+ .+++|+. ... ... ..+.+.+|+++++.++|++++....++...+..++|
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv 414 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV 414 (535)
T ss_pred CccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence 4467889999999999986443 3444432 211 111 134688999999999999999888777777788999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
|||++|++|.+++. ....++.+++.+|.+||+.+ ++||||||+|||+ +++.++|+|||+++.
T Consensus 415 ~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g-iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 415 MEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG-IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC-CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999998873 35678999999999999999 9999999999999 578899999999875
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-17 Score=140.91 Aligned_cols=137 Identities=15% Similarity=0.033 Sum_probs=114.8
Q ss_pred hhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCC--CccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 30 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN--NRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
+++.+|.|.++.||++...+ ..+++|....... ...+.+|+.+++.++| .++++++++....+..+++|||++|+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 45788999999999999744 7899999865443 5678999999999976 58999999888878899999999987
Q ss_pred CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC
Q 012608 108 TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 108 sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~ 179 (460)
++... +......++.+++.++.++|.. + ++|+|++|+||++++.+.++++|||.+.......
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~-i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~~~ 143 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLV-LCHGDLHPGNILVDDGKILGIIDWEYAGYGPPAF 143 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceE-EEecCCCcceEEEECCcEEEEEecccccCCChHH
Confidence 77543 4566777899999999999984 6 9999999999999998999999999887544333
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-17 Score=142.93 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=99.3
Q ss_pred hcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHH----------------------HHHHHHHHhcCCCC--cc
Q 012608 31 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQ----------------------FLEEARSVGQLRNN--RL 84 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~--~i 84 (460)
.+.||+|+||.||+|...+|+.||||++....... ... ...|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 56789999999999997789999999986543211 111 13566666666443 34
Q ss_pred ceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCC
Q 012608 85 TNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN 163 (460)
Q Consensus 85 v~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~ 163 (460)
++++++ ...++||||++|+++...... ..... .....++.+++.++.++|. .+ |+|+||||+||+++ ++.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~--~~~~~-~~~~~~~~~~~~~l~~lh~~~~-ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLK--DVRLL-EDPEELYDQILELMRKLYREAG-LVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhh--hhhhc-ccHHHHHHHHHHHHHHHhhccC-cCcCCCChhhEEEE-CCc
Confidence 555543 235899999998543221110 00011 5678899999999999999 88 99999999999999 889
Q ss_pred eEEccCCCcccCC
Q 012608 164 PRLSTFGLMKNSR 176 (460)
Q Consensus 164 ~kl~DFg~a~~~~ 176 (460)
++|+|||.+....
T Consensus 153 ~~liDfg~a~~~~ 165 (187)
T cd05119 153 VYIIDVPQAVEID 165 (187)
T ss_pred EEEEECccccccc
Confidence 9999999986543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.1e-17 Score=145.44 Aligned_cols=134 Identities=19% Similarity=0.168 Sum_probs=104.1
Q ss_pred ccC-CCCCCeEEEEEEcCCcEEEEEEecCCC-------------CCCHHHHHHHHHHHhcCCCCcc--ceeeeEEeeCC-
Q 012608 33 EHG-EKAPNVVYKGKLENQRRIAVKRFNRMA-------------WPDPRQFLEEARSVGQLRNNRL--TNLLGCCCEGD- 95 (460)
Q Consensus 33 ~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~~i--v~~~~~~~~~~- 95 (460)
.+| .|+.|+||.+... +..++||.+.... ......+.+|+.++.+|.|++| +..+++.....
T Consensus 38 ~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~ 116 (239)
T PRK01723 38 VVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG 116 (239)
T ss_pred eeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence 456 7888899999874 7789999875421 0123568899999999988775 67777654332
Q ss_pred e---eEEEEEcCCC-CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 96 E---RLLVAEYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 96 ~---~~lv~e~~~g-~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
. .++|||+++| .+|.+++. ..+++... +.+++.+|.+||+.| |+|+||||.|||++.++.++|+|||.
T Consensus 117 ~~~~~~lV~e~l~G~~~L~~~l~---~~~l~~~~----~~~i~~~l~~lH~~G-I~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 117 LFYRADILIERIEGARDLVALLQ---EAPLSEEQ----WQAIGQLIARFHDAG-VYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred cceeeeEEEEecCCCCCHHHHHh---cCCCCHHH----HHHHHHHHHHHHHCC-CCCCCCCchhEEEcCCCCEEEEECCC
Confidence 2 3599999997 69998874 33455443 568999999999999 99999999999999888999999998
Q ss_pred cccC
Q 012608 172 MKNS 175 (460)
Q Consensus 172 a~~~ 175 (460)
+...
T Consensus 189 ~~~~ 192 (239)
T PRK01723 189 GELR 192 (239)
T ss_pred cccC
Confidence 7653
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.9e-18 Score=173.57 Aligned_cols=251 Identities=16% Similarity=0.154 Sum_probs=193.1
Q ss_pred CcccchhcccCCCCCCeEEEEEEc--CCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE--NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~l 99 (460)
...|++++.||.|+|+.|-..... ....+|+|.+.... .........|..+-+.+. |+|++.+++.....+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 567889999999999999887743 34556677665443 222455667888888886 9999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCcccccccCCcEEEcCCC-CeEEccCCCcccCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT-SKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~~iiH~Dikp~Nill~~~~-~~kl~DFg~a~~~~~ 177 (460)
++++.+|+++.+.+........+....-.++.|+..++.|+| ..+ +.|+||||+|.+++..+ .+++.|||+|..+..
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~-~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG-VTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc-cccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999988773222225666777888999999999999 888 99999999999999999 999999999987665
Q ss_pred -C------CCccC-CCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCc
Q 012608 178 -G------KSYST-NLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 178 -~------~~~~~-t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
. ....| ++.|+|||...+.. ..+..|+||.|+++.-+++|..|+................. .........
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 256 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK-GRFTQLPWN 256 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc-cccccCccc
Confidence 2 23457 99999999998744 57799999999999999999988754432221111111111 111123344
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+....+++.+++..+|..|.+.+++..
T Consensus 257 ~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 257 SISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cCChhhhhcccccccCCchhccccccccc
Confidence 56678899999999999999999988865
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-16 Score=132.33 Aligned_cols=106 Identities=15% Similarity=0.104 Sum_probs=101.4
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
+..+...|..+++.|+|++|+..|++++.++|. +..+|.++|.++..+|++++|+..|++|++++|+++.+|+++|.++
T Consensus 24 p~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l 102 (144)
T PRK15359 24 PETVYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCL 102 (144)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 334778899999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 431 SAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
..+|++++|+++|++|++++|++..++
T Consensus 103 ~~~g~~~eAi~~~~~Al~~~p~~~~~~ 129 (144)
T PRK15359 103 KMMGEPGLAREAFQTAIKMSYADASWS 129 (144)
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999997765
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.8e-16 Score=148.67 Aligned_cols=106 Identities=27% Similarity=0.400 Sum_probs=102.3
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
+...+..|+.+|+.|+|..|+..|++||..+|+ ++.+|.|||.||.+++.+..|++|++++++++|++.++|++.|.++
T Consensus 358 A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~al 436 (539)
T KOG0548|consen 358 AEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAAL 436 (539)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 667788899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 431 SAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
..+.+|++|+++|.+|+++||++.++.
T Consensus 437 ~~mk~ydkAleay~eale~dp~~~e~~ 463 (539)
T KOG0548|consen 437 RAMKEYDKALEAYQEALELDPSNAEAI 463 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhHHHH
Confidence 999999999999999999999987654
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1e-15 Score=126.95 Aligned_cols=113 Identities=18% Similarity=0.233 Sum_probs=105.4
Q ss_pred hhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc----cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchH
Q 012608 346 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI 421 (460)
Q Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~ 421 (460)
.....+..++..|+.+|..|+|++|...|+.||++.|.- ...+|.|+|.|+++++.++.||.+|.+||+|+|.|.+
T Consensus 90 k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~k 169 (271)
T KOG4234|consen 90 KAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEK 169 (271)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHH
Confidence 446778899999999999999999999999999999972 3468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 422 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
|+.+++.+|..+.+|++|+++|++.+++||.+..|..
T Consensus 170 Al~RRAeayek~ek~eealeDyKki~E~dPs~~ear~ 206 (271)
T KOG4234|consen 170 ALERRAEAYEKMEKYEEALEDYKKILESDPSRREARE 206 (271)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchHHHHH
Confidence 9999999999999999999999999999999987653
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.63 E-value=6.3e-16 Score=146.29 Aligned_cols=106 Identities=27% Similarity=0.389 Sum_probs=101.6
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
+..++.+|+++++.|+|+.|+.+|++||.++|. +...|.|++.+|..+|+|++|+.|..+.++++|+|+++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 356789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 431 SAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
..+|+|++|+..|.++|+.+|.|....
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~~L~ 107 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNKQLK 107 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchHHHH
Confidence 999999999999999999999987543
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.1e-15 Score=142.03 Aligned_cols=105 Identities=24% Similarity=0.268 Sum_probs=100.4
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 431 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 431 (460)
..+...|..++..|+|++|++.|++||+++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.+++
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 35788899999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHhhhhhhhccccc
Q 012608 432 AMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 432 ~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.+|+|++|+.+|++|++++|++..+.
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~~~~ 107 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDSRFT 107 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999987653
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-14 Score=118.55 Aligned_cols=102 Identities=16% Similarity=-0.014 Sum_probs=98.7
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
.+..+.++..|..++..|++++|...|+-...++|. ++..|+++|.|+..+|+|++||..|.+|+.++|+++.++++.|
T Consensus 32 ~~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag 110 (157)
T PRK15363 32 TQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAA 110 (157)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 356788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhh
Q 012608 428 AALSAMGMENEAQVALKEGTTLE 450 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~ 450 (460)
.++..+|+.++|.++|+.|+..-
T Consensus 111 ~c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 111 ECYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999875
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.6e-15 Score=134.41 Aligned_cols=108 Identities=23% Similarity=0.318 Sum_probs=102.7
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
+.....++++|+.||++|.|++||++|.++|.++|. ++.++.||+.+|+++.+|..|..||+.|+.+|..+.+||.++|
T Consensus 94 L~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~ 172 (536)
T KOG4648|consen 94 LKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRM 172 (536)
T ss_pred HHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHH
Confidence 455666899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
.+...+|+..||.++++.+|+|+|++.+-
T Consensus 173 ~AR~~Lg~~~EAKkD~E~vL~LEP~~~EL 201 (536)
T KOG4648|consen 173 QARESLGNNMEAKKDCETVLALEPKNIEL 201 (536)
T ss_pred HHHHHHhhHHHHHHhHHHHHhhCcccHHH
Confidence 99999999999999999999999997543
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.5e-15 Score=144.41 Aligned_cols=138 Identities=19% Similarity=0.180 Sum_probs=97.9
Q ss_pred cccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCH----------------------------------------HHHHH
Q 012608 32 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP----------------------------------------RQFLE 71 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~ 71 (460)
..||.|++|.||+|++.+|+.||||+.+....... -.|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 45899999999999998999999999865421100 02555
Q ss_pred HHHHHhcCC-----CCccceeeeEE-eeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHH-HHHHHHhCC
Q 012608 72 EARSVGQLR-----NNRLTNLLGCC-CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ-ALEYCTSKG 144 (460)
Q Consensus 72 E~~~l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~-~l~~lH~~~ 144 (460)
|+..+.++. +++| .+-.++ ...+..++||||++|++|.+...... ...+ ...++..++. .+..+|..|
T Consensus 203 Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhCC
Confidence 666666662 3332 222222 23455799999999999988764211 1122 2345555555 467889999
Q ss_pred CcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 145 RALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 145 ~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
++|+|+||.||+++.+++++++|||++...
T Consensus 278 -~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 278 -FFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred -ceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 999999999999999999999999987654
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.9e-15 Score=135.79 Aligned_cols=113 Identities=19% Similarity=0.255 Sum_probs=103.1
Q ss_pred hhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc--------------cHHHHhhHHHHHHhcCChHHHHHHHHH
Q 012608 346 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDAMQ 411 (460)
Q Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~ 411 (460)
+.+..+...+..|+.+|+.|+|..|+..|.+|+..-... -..+++|++.||+++++|.+|+..|++
T Consensus 203 e~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~k 282 (397)
T KOG0543|consen 203 ERLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNK 282 (397)
T ss_pred HHHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHH
Confidence 477889999999999999999999999999998653320 236799999999999999999999999
Q ss_pred hhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 412 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 412 a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+|+++|+|.+|+|++|.|+..+|+|+.|+.+|++|++++|.|.++..
T Consensus 283 vLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nka~~~ 329 (397)
T KOG0543|consen 283 VLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNKAARA 329 (397)
T ss_pred HHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcHHHHH
Confidence 99999999999999999999999999999999999999999987654
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.57 E-value=9.6e-15 Score=136.47 Aligned_cols=105 Identities=25% Similarity=0.336 Sum_probs=96.5
Q ss_pred hhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 346 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
++..-+..++++|+.+|++|+|++||.+|++||++.|+ .+..|.|++.||..+|+++..++++.+|++++|++.+|+++
T Consensus 110 ~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~R 188 (606)
T KOG0547|consen 110 ERLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLR 188 (606)
T ss_pred HHHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHH
Confidence 34567889999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
|+.++..+|++++|+.+.. ++-|+..
T Consensus 189 RA~A~E~lg~~~eal~D~t-v~ci~~~ 214 (606)
T KOG0547|consen 189 RASAHEQLGKFDEALFDVT-VLCILEG 214 (606)
T ss_pred HHHHHHhhccHHHHHHhhh-HHHHhhh
Confidence 9999999999999999864 3444433
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.56 E-value=7e-15 Score=142.46 Aligned_cols=241 Identities=21% Similarity=0.242 Sum_probs=185.9
Q ss_pred cchhcccCC--CCCCeEEEEEE---cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEE
Q 012608 28 ENIVSEHGE--KAPNVVYKGKL---ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 28 ~~i~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 99 (460)
..+.+.+|. |.+|.||.+.. .++..+|+|+-+.... .....-.+|+.-.+.+ .|+|.++.+..+..++..++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 456678899 99999999985 3588899998543322 2344556777777888 59999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCcccccccCCcEEEcCC-CCeEEccCCCccc
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ----ALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKN 174 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~----~l~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~DFg~a~~ 174 (460)
-+|++. .+|..+.... ..-++...++..+.+... |+..+|+.+ ++|-|+||.||++..+ ...+++|||+...
T Consensus 196 qtE~~~-~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~-~~~~~~kp~~i~~~~~~~s~~~~df~~v~~ 272 (524)
T KOG0601|consen 196 QTELCG-ESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN-IVHDDLKPANIFTTSDWTSCKLTDFGLVSK 272 (524)
T ss_pred eecccc-chhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCc-ccccccchhheecccccceeecCCcceeEE
Confidence 999995 8888877542 334778888899999998 999999999 9999999999999988 7889999999877
Q ss_pred CCCCC---------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCC
Q 012608 175 SRDGK---------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245 (460)
Q Consensus 175 ~~~~~---------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (460)
+.... ...+...|++||... +.++..+|+|++|.++.+..++..++...-...|. .+.......+
T Consensus 273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-----~~r~~~ip~e 346 (524)
T KOG0601|consen 273 ISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-----QLRQGYIPLE 346 (524)
T ss_pred ccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-----ccccccCchh
Confidence 65442 114567799999986 67888999999999999999998766443222222 2222223334
Q ss_pred CCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+....+.++...+..|++.+|..|++.+.+..
T Consensus 347 ~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 347 FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred hhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 55555667777999999999999998887765
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.2e-14 Score=135.13 Aligned_cols=106 Identities=13% Similarity=0.170 Sum_probs=101.1
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.+++....+|..|+-.|+|++|+++|+.||..+|+ +..+|+++|..+....+.++||..|.+|++|.|++..++||+|.
T Consensus 428 ~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgI 506 (579)
T KOG1125|consen 428 IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGI 506 (579)
T ss_pred CChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhh
Confidence 45677788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
+++.+|.|+||++.|-.||.+.++...
T Consensus 507 S~mNlG~ykEA~~hlL~AL~mq~ks~~ 533 (579)
T KOG1125|consen 507 SCMNLGAYKEAVKHLLEALSMQRKSRN 533 (579)
T ss_pred hhhhhhhHHHHHHHHHHHHHhhhcccc
Confidence 999999999999999999999998544
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.7e-14 Score=132.41 Aligned_cols=105 Identities=12% Similarity=-0.035 Sum_probs=101.8
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
+.+..++.+|..+.+.|++++|+..|+++++++|+ ++.+|+++|.++...|++++|+..|++|++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56778999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
+++..|++++|+++|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999875
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=114.45 Aligned_cols=108 Identities=13% Similarity=0.118 Sum_probs=102.9
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..++......|..++..|++++|++.|+++++.+|. ++.++.++|.++...|++++|+..++++++++|+++..++++|
T Consensus 14 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~la 92 (135)
T TIGR02552 14 SEQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHAA 92 (135)
T ss_pred hhhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Confidence 345677899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
.++..+|++++|+..|+++++++|++...
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 121 (135)
T TIGR02552 93 ECLLALGEPESALKALDLAIEICGENPEY 121 (135)
T ss_pred HHHHHcCCHHHHHHHHHHHHHhccccchH
Confidence 99999999999999999999999998764
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.3e-14 Score=134.91 Aligned_cols=108 Identities=17% Similarity=0.126 Sum_probs=89.5
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.=+.+..++|..+-++|++++|+.+|+.||+++|. .+.++.|+|.+|-.+|+.++|+.+|.+||.++|.+++|+.|+|.
T Consensus 386 ~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLas 464 (966)
T KOG4626|consen 386 EFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLAS 464 (966)
T ss_pred hhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHHH
Confidence 34566778888888888888888888888888888 78888888888888888888888888888888888888888888
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+|...|+..+|++.|+.||+|+|+..+|.
T Consensus 465 i~kDsGni~~AI~sY~~aLklkPDfpdA~ 493 (966)
T KOG4626|consen 465 IYKDSGNIPEAIQSYRTALKLKPDFPDAY 493 (966)
T ss_pred HhhccCCcHHHHHHHHHHHccCCCCchhh
Confidence 88888888888888888888888877764
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.49 E-value=6.5e-14 Score=134.35 Aligned_cols=110 Identities=13% Similarity=0.066 Sum_probs=106.7
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
...+++..++|+++...|.+++|+..|.+|++..|. .+++++|+|.+|..+|++++|+.+|+.||+++|.++++|.|+|
T Consensus 351 p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~fAda~~NmG 429 (966)
T KOG4626|consen 351 PNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPTFADALSNMG 429 (966)
T ss_pred CccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCchHHHHHHhcc
Confidence 357889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
..|-.+|+.++|+.+|.+|+.++|..++|++
T Consensus 430 nt~ke~g~v~~A~q~y~rAI~~nPt~AeAhs 460 (966)
T KOG4626|consen 430 NTYKEMGDVSAAIQCYTRAIQINPTFAEAHS 460 (966)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCcHHHHHHh
Confidence 9999999999999999999999999998876
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.9e-13 Score=132.62 Aligned_cols=168 Identities=15% Similarity=0.192 Sum_probs=132.7
Q ss_pred EEE-EE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCC
Q 012608 42 VYK-GK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETH 119 (460)
Q Consensus 42 Vy~-~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~ 119 (460)
+|. |. ..++.+|.|...+.....-.....+-++.|+.++||||+++++.++..+..|+|+|-+ ..|..++..
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~---- 100 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE---- 100 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH----
Confidence 453 44 5679999999988776644556778889999999999999999999999999999999 578887753
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC----ccCCCcccCcccccc
Q 012608 120 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS----YSTNLAFTPPEYLRT 195 (460)
Q Consensus 120 ~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~----~~~t~~y~aPE~~~~ 195 (460)
+....+.-.+.||+.||.+||+.++++|++|.-+.|+++..|..||++|-++........ ...-..|..|+.+..
T Consensus 101 -l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 101 -LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 336667777899999999999877799999999999999999999999988765443321 112234566665532
Q ss_pred CCCCCCCceehHHHHHHHHhhCC
Q 012608 196 GRVTPESVIYSFGTLLLDLLSGK 218 (460)
Q Consensus 196 ~~~~~~sDi~slG~~l~el~tg~ 218 (460)
.. -..|.|.|||++++++.|.
T Consensus 180 s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCcc
Confidence 11 3469999999999999994
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.6e-13 Score=119.02 Aligned_cols=106 Identities=13% Similarity=0.043 Sum_probs=99.7
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHH-HhcCC--hHHHHHHHHHhhhhCCcchHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDM--PQDALNDAMQAQIISPIWHIASY 424 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~--~~~A~~~~~~a~~l~p~~~~a~~ 424 (460)
..++..|..+|..+...|++++|+..|++|++++|+ +..++.+.|.++ ...|+ +++|+..++++++++|+++.+++
T Consensus 70 P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al~ 148 (198)
T PRK10370 70 PQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTALM 148 (198)
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHHH
Confidence 357889999999999999999999999999999999 899999999975 67777 59999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 425 LQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 425 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
++|.+++.+|+|++|+.+|+++++++|.+.
T Consensus 149 ~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 149 LLASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 999999999999999999999999998865
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-13 Score=117.73 Aligned_cols=129 Identities=16% Similarity=0.077 Sum_probs=96.7
Q ss_pred hcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCc-cceeeeEEeeCCeeEEEEEcCCCCCH
Q 012608 31 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~e~~~g~sL 109 (460)
++.++.|.++.||+++.. |+.|++|....... ....+..|+.+++.+.+.+ +++++.+.. ...++|||+++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 356789999999999864 78899998755432 2235678999999996544 445555432 345899999999887
Q ss_pred HhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 110 AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR----ALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~----iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
.+.. . ....++.+++.+|..||+.+. ++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 5420 1 113456789999999999871 39999999999999 66899999998754
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.8e-14 Score=141.86 Aligned_cols=143 Identities=17% Similarity=0.153 Sum_probs=95.7
Q ss_pred CcccchhcccCCCCCCeEEEEEEcC-CcEEEEEEecCCCCC--------------------------CH-----------
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWP--------------------------DP----------- 66 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--------------------------~~----------- 66 (460)
|..+.. .-+|+|++|.||+|++.+ |+.||||+++..... +.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 455555 678999999999999776 999999999754210 00
Q ss_pred ---HHHHHHHHHHhcCC----CCccceeeeEEe-eCCeeEEEEEcCCCCCHHhhhhccCCC----CCCHHHHHHHHHHHH
Q 012608 67 ---RQFLEEARSVGQLR----NNRLTNLLGCCC-EGDERLLVAEYMPNETLAKHLFHWETH----PMKWAMRLRVVLHLA 134 (460)
Q Consensus 67 ---~~~~~E~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~g~sL~~~~~~~~~~----~~~~~~~~~i~~qi~ 134 (460)
-.+.+|+..+.++. +.+.+.+-.++. -....++||||++|+++.+.-.-...+ .+....+..++.|+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 12455665555552 333333333332 245678999999999998743211111 23333444444444
Q ss_pred HHHHHHHhCCCcccccccCCcEEEcCCC----CeEEccCCCcccCC
Q 012608 135 QALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNSR 176 (460)
Q Consensus 135 ~~l~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~DFg~a~~~~ 176 (460)
...| ++|+|+||.||+++.++ +++++|||++....
T Consensus 277 ------f~~G-ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ------FRDG-FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HhCC-eeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 3578 99999999999999887 99999999887653
|
|
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-13 Score=116.86 Aligned_cols=132 Identities=17% Similarity=0.118 Sum_probs=115.2
Q ss_pred hhccCcchhhhhhchhhhhhhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHh--------hcCCCc---------cHHHH
Q 012608 327 ISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFI--------DAGTMV---------SPTVY 389 (460)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al--------~~~p~~---------~~~~~ 389 (460)
+.....+.+..+.|...-.+.+.....+.+.|+.+|+.|+|.+|...|..|| +..|.+ ...++
T Consensus 154 lqVe~P~qYq~e~WqlsddeKmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLl 233 (329)
T KOG0545|consen 154 LQVEAPSQYQRETWQLSDDEKMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLL 233 (329)
T ss_pred hhccCchhhccccccCCchHhhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHH
Confidence 3455566666777777777888999999999999999999999999999997 234441 34568
Q ss_pred hhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 390 ARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 390 ~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
.|.+.|++..|+|-++++.+...+..+|++.+|||++|.++...-+.++|.++|.++|+++|..+.+.+
T Consensus 234 lNy~QC~L~~~e~yevleh~seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpslasvVs 302 (329)
T KOG0545|consen 234 LNYCQCLLKKEEYYEVLEHCSEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSLASVVS 302 (329)
T ss_pred HhHHHHHhhHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998876543
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.9e-13 Score=124.35 Aligned_cols=104 Identities=22% Similarity=0.309 Sum_probs=98.7
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc---cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
.....+...|+.++++|+|..|.++|+.||.++|++ +..+|.|+|.++.++|+..+|+.+|+.|+.|||.+.+||.+
T Consensus 247 k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikall~ 326 (486)
T KOG0550|consen 247 KKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKALLR 326 (486)
T ss_pred HHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHHHH
Confidence 567889999999999999999999999999999984 55679999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
+|.|+..+++|++|+++|++|++++..
T Consensus 327 ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 327 RANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999998765
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.6e-12 Score=110.22 Aligned_cols=137 Identities=11% Similarity=0.151 Sum_probs=100.6
Q ss_pred hcccCCCCCCeEEEEEEcC-------CcEEEEEEecCCCC---------------------CC-HHHH----HHHHHHHh
Q 012608 31 VSEHGEKAPNVVYKGKLEN-------QRRIAVKRFNRMAW---------------------PD-PRQF----LEEARSVG 77 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~---------------------~~-~~~~----~~E~~~l~ 77 (460)
.+.||.|-=+.||.|...+ +..+|||+.+.... .+ ...+ .+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4678999999999998432 57999998753210 01 1223 38999999
Q ss_pred cCC--CCccceeeeEEeeCCeeEEEEEcCCCCCHHh-hhhccCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCcccccccC
Q 012608 78 QLR--NNRLTNLLGCCCEGDERLLVAEYMPNETLAK-HLFHWETHPMKWAMRLRVVLHLAQALEYC-TSKGRALYHDLNA 153 (460)
Q Consensus 78 ~l~--h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~-~~~~~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~~iiH~Dikp 153 (460)
++. .-+++.++++ ...++||||+.+..+.. .+ ....++......+..+++.+|..+ |..+ +||+|+++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~g-lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKECN-LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhCC-eecCCCCH
Confidence 994 3567777765 45689999997643321 22 122355566778889999999999 8888 99999999
Q ss_pred CcEEEcCCCCeEEccCCCcccCC
Q 012608 154 YRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 154 ~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.|||++ ++.++|+|||.+....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4679999999876554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.7e-13 Score=95.59 Aligned_cols=67 Identities=16% Similarity=0.133 Sum_probs=52.9
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcC-ChHHHHHHHHHhhhhhh
Q 012608 385 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEA 451 (460)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~ 451 (460)
++..|.++|.++...|++++|+..|++|++++|+++.+|+++|.++..+| ++++|+++|++|+++||
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 46677777788888888888888888888888888888888888888887 67888888888887776
|
... |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.5e-13 Score=130.04 Aligned_cols=241 Identities=15% Similarity=0.073 Sum_probs=177.6
Q ss_pred ccchhcccCCCCCCeEEEEEE--cCCcEEEEEEecCCCCCCHH--HHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL--ENQRRIAVKRFNRMAWPDPR--QFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
++..+..||.|.|+.|+.... .++..+++|.+......... .-..|+.+...+ .|.+++.....+......|+=.
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~ 345 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL 345 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence 456788899999999999873 46888999988766544433 344677777777 6999999888888878888889
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-CCeEEccCCCcccCCCCC-
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~DFg~a~~~~~~~- 179 (460)
|||.|+++..... ....+.+...+++..|++.++.++|++. ++|+|+||+||++..+ +..+++|||....+....
T Consensus 346 e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~~-~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~ 422 (524)
T KOG0601|consen 346 EFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSKL-FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG 422 (524)
T ss_pred hhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccchh-hhcccccccceeeccchhhhhccccccccccceecc
Confidence 9999998877663 3456788899999999999999999999 9999999999999876 778999999987533222
Q ss_pred CccCCCccc--CccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 180 SYSTNLAFT--PPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 180 ~~~~t~~y~--aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
.....-.++ ++.......+..+.|++|||..+.+.++|....+. ... +.. +..... ...+.....+..+
T Consensus 423 ~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-~~~-~~~-----i~~~~~--p~~~~~~~~~q~~ 493 (524)
T KOG0601|consen 423 VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-GVQ-SLT-----IRSGDT--PNLPGLKLQLQVL 493 (524)
T ss_pred cccccccccccchhhccccccccccccccccccccccccCcccCcc-ccc-cee-----eecccc--cCCCchHHhhhhh
Confidence 222233334 45555556688899999999999999999853322 111 111 110000 1112333678888
Q ss_pred HHHHcccCCCCCCChhHHHHHh
Q 012608 258 ASRCLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~L 279 (460)
...+...++..||++.++....
T Consensus 494 ~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 494 LKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred hhhhcCCccccchhhhhhcccc
Confidence 9999999999999988876543
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.6e-13 Score=119.47 Aligned_cols=194 Identities=18% Similarity=0.223 Sum_probs=135.5
Q ss_pred HHhcCCCCccceeeeEEeeC-----CeeEEEEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC-Cc
Q 012608 75 SVGQLRNNRLTNLLGCCCEG-----DERLLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG-RA 146 (460)
Q Consensus 75 ~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i 146 (460)
-+-++.|.|||+++.++... ....++.|||..|++.+++++. ....+......+|.-||+.||.|||+-. +|
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 34455699999999998643 3467899999999999999753 3456778888999999999999999975 58
Q ss_pred ccccccCCcEEEcCCCCeEEccCCCcccCCC--------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCC
Q 012608 147 LYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 218 (460)
Q Consensus 147 iH~Dikp~Nill~~~~~~kl~DFg~a~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~ 218 (460)
+|+++..+.|++..+|.+|+.---....... ...-.+-++|.+||.=.....+.++|||+||+..++|..+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHhe
Confidence 9999999999999999888763221111110 11223457899999766566778999999999999998886
Q ss_pred CCCC-ChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 219 HIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 219 ~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.-.. +...-.......... .......=..++.+|++..|..||+++.++-
T Consensus 280 iq~tnseS~~~~ee~ia~~i---------~~len~lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 280 IQSTNSESKVEVEENIANVI---------IGLENGLQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred eccCCCcceeehhhhhhhhe---------eeccCccccCcCcccccCCCCCCcchhhhhc
Confidence 3211 111100000000000 0001112345789999999999999999875
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4e-12 Score=113.83 Aligned_cols=109 Identities=25% Similarity=0.293 Sum_probs=100.3
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc---CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA---GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 424 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~ 424 (460)
.+.|..++..|+.+|+.++|..|++.|+++|.. ||+-+..+|.|||.|.+.+|+|..||.||.+|+.++|++.+||+
T Consensus 78 ~E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~ 157 (390)
T KOG0551|consen 78 HEQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYI 157 (390)
T ss_pred HHHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhh
Confidence 357999999999999999999999999999986 45557889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 425 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 425 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+-+.|++++.++++|+...+..++++-+...+
T Consensus 158 R~Akc~~eLe~~~~a~nw~ee~~~~d~e~K~~ 189 (390)
T KOG0551|consen 158 RGAKCLLELERFAEAVNWCEEGLQIDDEAKKA 189 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 99999999999999999999988887766543
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.7e-13 Score=127.72 Aligned_cols=108 Identities=21% Similarity=0.281 Sum_probs=103.6
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
.+..+.+.|+..+..++|+.|+..|.+||+++|+ ++.+|.+|+.++.+.++|.+|+.|+.+||+++|.+.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3567789999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
.+.++++.+|+.+|++..++.|++..+.+
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~~~~r 110 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDPDATR 110 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcHHHHH
Confidence 99999999999999999999999988765
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.1e-12 Score=132.04 Aligned_cols=104 Identities=23% Similarity=0.340 Sum_probs=96.6
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
....+..++.+|+.+++.|+|++|+..|+++|+++|+ +.+|.++|.||.++|++++|+++|++|++++|++.++|+++
T Consensus 123 ~~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~ 200 (615)
T TIGR00990 123 RKKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRR 200 (615)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3456788999999999999999999999999999997 57899999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
|.+|..+|++++|+.+|..++.+++.
T Consensus 201 a~a~~~lg~~~eA~~~~~~~~~~~~~ 226 (615)
T TIGR00990 201 ANAYDGLGKYADALLDLTASCIIDGF 226 (615)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999888766543
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.4e-12 Score=94.00 Aligned_cols=67 Identities=22% Similarity=0.344 Sum_probs=65.0
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcC-ChHHHHHHHHHhhhhCC
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISP 417 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~l~p 417 (460)
++..|...|..++..|+|++|+..|++||+++|+ ++.+|+++|.+|..+| ++++|+.++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 5788999999999999999999999999999999 8999999999999999 79999999999999998
|
... |
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.34 E-value=9.6e-12 Score=100.07 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=97.2
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc--cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc---hHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASYL 425 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---~~a~~~ 425 (460)
+..++..|..+.+.|+|++|++.|.++++.+|++ ...+++.+|.++.+.|++++|+..|++++..+|++ +.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPKSTYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLK 81 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHH
Confidence 4578999999999999999999999999999872 25688899999999999999999999999999985 678999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+|.++..+|++++|+..|+++++..|++..+
T Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 112 (119)
T TIGR02795 82 LGMSLQELGDKEKAKATLQQVIKRYPGSSAA 112 (119)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHCcCChhH
Confidence 9999999999999999999999999987654
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.2e-12 Score=109.30 Aligned_cols=102 Identities=25% Similarity=0.306 Sum_probs=96.9
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
..+..+...|+.++..+.|..||.+|.+||-++|. .+.+|.|++.||++.++++.+..++.+|++++|+..+++|.+|.
T Consensus 8 ~~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~ 86 (284)
T KOG4642|consen 8 ESAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQ 86 (284)
T ss_pred hHHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHH
Confidence 34677889999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhh
Q 012608 429 ALSAMGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~ 451 (460)
++++...|++|+..+.+|..+-.
T Consensus 87 ~~l~s~~~~eaI~~Lqra~sl~r 109 (284)
T KOG4642|consen 87 WLLQSKGYDEAIKVLQRAYSLLR 109 (284)
T ss_pred HHHhhccccHHHHHHHHHHHHHh
Confidence 99999999999999999976643
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.4e-11 Score=94.03 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=96.9
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc----hHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW----HIA 422 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~----~~a 422 (460)
.++....+...|..+...|+.+.|++.|.++|.+.|. .+.+|+|++.++..+|+.++|+.|+++|+++.-+. ..+
T Consensus 39 ~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa 117 (175)
T KOG4555|consen 39 AIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQA 117 (175)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHH
Confidence 4456677888999999999999999999999999999 99999999999999999999999999999997644 578
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 423 SYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 423 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
|..+|.+|..+|+.+.|..+|+.|.+|..+.
T Consensus 118 ~vQRg~lyRl~g~dd~AR~DFe~AA~LGS~F 148 (175)
T KOG4555|consen 118 FVQRGLLYRLLGNDDAARADFEAAAQLGSKF 148 (175)
T ss_pred HHHHHHHHHHhCchHHHHHhHHHHHHhCCHH
Confidence 9999999999999999999999999886654
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-11 Score=111.12 Aligned_cols=140 Identities=17% Similarity=0.159 Sum_probs=107.6
Q ss_pred cccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCC--CccceeeeEEeeC---CeeEEEEEcCC
Q 012608 32 SEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRN--NRLTNLLGCCCEG---DERLLVAEYMP 105 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~---~~~~lv~e~~~ 105 (460)
+.++.|.++.||++...+|+.+++|........ ....+.+|+++++.+.+ .++++++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 467899999999999766789999997654321 34578999999999965 4467788776653 25689999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK------------------------------------------ 143 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~------------------------------------------ 143 (460)
|.++.+.+. ...++......++.+++..|..||+.
T Consensus 84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 998877552 13466677777788888888888741
Q ss_pred -------------CCcccccccCCcEEEcC--CCCeEEccCCCccc
Q 012608 144 -------------GRALYHDLNAYRILFDE--DGNPRLSTFGLMKN 174 (460)
Q Consensus 144 -------------~~iiH~Dikp~Nill~~--~~~~kl~DFg~a~~ 174 (460)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 01689999999999998 56689999998764
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.4e-12 Score=129.70 Aligned_cols=107 Identities=15% Similarity=0.084 Sum_probs=72.2
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
..+..+..+|..++..|++++|+..|+++++++|+ ....|.++|.++..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 329 ~~a~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~ 407 (615)
T TIGR00990 329 KEAIALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQ 407 (615)
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34555666666666667777777777777766666 66666666666666666666777666666666666666666666
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
++..+|++++|+.+|+++++++|++..+
T Consensus 408 ~~~~~g~~~~A~~~~~kal~l~P~~~~~ 435 (615)
T TIGR00990 408 LHFIKGEFAQAGKDYQKSIDLDPDFIFS 435 (615)
T ss_pred HHHHcCCHHHHHHHHHHHHHcCccCHHH
Confidence 6666667777777777666666665443
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.31 E-value=2e-11 Score=104.46 Aligned_cols=108 Identities=12% Similarity=-0.018 Sum_probs=71.7
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhh--CCcchHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII--SPIWHIASYL 425 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l--~p~~~~a~~~ 425 (460)
.+...+|.-+|..|.+.|+.+.|-+.|++|+.++|+ +..+.+|.|.-+..+|+|++|...|++|+.. .|.-++.|-|
T Consensus 66 Ps~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN 144 (250)
T COG3063 66 PSYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLEN 144 (250)
T ss_pred cccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhh
Confidence 355666666666666667777777777777777766 6666666666666666666677666666543 2344666667
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+|.|-+++|+++.|.++|+++|++||++..+
T Consensus 145 ~G~Cal~~gq~~~A~~~l~raL~~dp~~~~~ 175 (250)
T COG3063 145 LGLCALKAGQFDQAEEYLKRALELDPQFPPA 175 (250)
T ss_pred hHHHHhhcCCchhHHHHHHHHHHhCcCCChH
Confidence 7777777777777777777777777766543
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.4e-11 Score=114.03 Aligned_cols=147 Identities=8% Similarity=-0.011 Sum_probs=118.2
Q ss_pred CCccchhHHHHHHHhhhccCcchhhh-hhchhhhhhhHHHHHHhHHhhhHHHhhC-CHHHHHHHHHHHhhcCCCccHHHH
Q 012608 312 CSRRDLTAIHEILEKISYKDDEGVAN-ELSFQMWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVY 389 (460)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~ 389 (460)
.-..+.......++.+-........+ ........-...+..+|..+|.++...| ++++|++.++++++.+|+ +..+|
T Consensus 31 ~y~~~~~~a~~~~ra~l~~~e~serAL~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW 109 (320)
T PLN02789 31 AYTPEFREAMDYFRAVYASDERSPRALDLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIW 109 (320)
T ss_pred eeCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHh
Confidence 33455666666666653222211111 1112222334467889999999999998 689999999999999999 88999
Q ss_pred hhHHHHHHhcCCh--HHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccCC
Q 012608 390 ARRSLCYLMSDMP--QDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQ 459 (460)
Q Consensus 390 ~~~~~~~~~~~~~--~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~~ 459 (460)
+.++.++.++++. ++++..++++++++|++..||+++|.++..+|+|++|+++++++|++||.+..||.+
T Consensus 110 ~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~sAW~~ 181 (320)
T PLN02789 110 HHRRWLAEKLGPDAANKELEFTRKILSLDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNNSAWNQ 181 (320)
T ss_pred HHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCchhHHHH
Confidence 9999999988874 788999999999999999999999999999999999999999999999999999854
|
|
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.1e-12 Score=94.37 Aligned_cols=83 Identities=20% Similarity=0.294 Sum_probs=75.1
Q ss_pred hhCCHHHHHHHHHHHhhcCCCc-cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHH
Q 012608 363 RQKDLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQV 441 (460)
Q Consensus 363 ~~~~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~ 441 (460)
.+|+|++|+..|+++++.+|.+ +..+++.+|.||++.|+|++|+..+++ ++.+|.+...++.+|.++..+|+|++|++
T Consensus 1 ~~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~ 79 (84)
T PF12895_consen 1 DQGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIK 79 (84)
T ss_dssp HTT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred CCccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 3689999999999999999963 567788899999999999999999999 99999999999999999999999999999
Q ss_pred HHHHh
Q 012608 442 ALKEG 446 (460)
Q Consensus 442 ~~~~a 446 (460)
.|++|
T Consensus 80 ~l~~~ 84 (84)
T PF12895_consen 80 ALEKA 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99986
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.8e-11 Score=93.48 Aligned_cols=99 Identities=20% Similarity=0.249 Sum_probs=94.4
Q ss_pred HhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHh
Q 012608 353 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 432 (460)
Q Consensus 353 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 432 (460)
.++.+|..++..|++++|+..+.++++..|. +..++..+|.++...+++++|+..+++++.+.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 4778999999999999999999999999999 778999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHhhhhhhh
Q 012608 433 MGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 433 ~~~~~~A~~~~~~al~l~~~ 452 (460)
+|++++|...++++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999998874
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.6e-12 Score=124.96 Aligned_cols=105 Identities=14% Similarity=0.098 Sum_probs=87.4
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
..++.|...|+.+--+++++.||.+|.+||++||+ ..-+|...|.=+....+++.|...|++||..+|.+..|||.+|.
T Consensus 419 ~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwYGlG~ 497 (638)
T KOG1126|consen 419 NSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWYGLGT 497 (638)
T ss_pred CCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHHhhhh
Confidence 45889999999999999999999999999999998 66677777777777788888888888888888888888888888
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
+|+++++++.|.-.|++|+++||.+.
T Consensus 498 vy~Kqek~e~Ae~~fqkA~~INP~ns 523 (638)
T KOG1126|consen 498 VYLKQEKLEFAEFHFQKAVEINPSNS 523 (638)
T ss_pred heeccchhhHHHHHHHhhhcCCccch
Confidence 88888888888888888888887764
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.4e-11 Score=103.71 Aligned_cols=108 Identities=17% Similarity=0.115 Sum_probs=98.3
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc--cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 424 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~ 424 (460)
....+..++.+|..+...|+|++|+.+|+++++..|+. ...++.++|.++..+|++++|+..++++++++|++..++.
T Consensus 31 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 110 (172)
T PRK02603 31 KAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALN 110 (172)
T ss_pred HhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 34678889999999999999999999999999887652 2468999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCC--------------hHHHHHHHHHhhhhhhhcc
Q 012608 425 LQAAALSAMGM--------------ENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 425 ~~g~~~~~~~~--------------~~~A~~~~~~al~l~~~~~ 454 (460)
.+|.++..+|+ +++|+++++++++++|++.
T Consensus 111 ~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 111 NIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 99999999988 6889999999999999864
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.9e-12 Score=111.72 Aligned_cols=106 Identities=17% Similarity=0.210 Sum_probs=101.3
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..+++..+++|..++..|+|..|+..|-.||+.||+ +..+++.||.+|+.+|+-..|+.|++++|++.|++..|...+|
T Consensus 35 ~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQRg 113 (504)
T KOG0624|consen 35 PADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQRG 113 (504)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHhc
Confidence 357788899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
.+++.+|++++|.++|+.+|+-+|.+.
T Consensus 114 ~vllK~Gele~A~~DF~~vl~~~~s~~ 140 (504)
T KOG0624|consen 114 VVLLKQGELEQAEADFDQVLQHEPSNG 140 (504)
T ss_pred hhhhhcccHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999998553
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.2e-11 Score=98.91 Aligned_cols=130 Identities=18% Similarity=0.192 Sum_probs=97.7
Q ss_pred ccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC--C------HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 33 EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--D------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.+++|+=+.+|.+.+ -|..+++|.=...... . .++..+|+.++.++.--.|....-+..+.+.-.|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 467889899999976 3445666642222111 1 246778999999997656655555555667778999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
+|..|.+.+... ...++..+-.-+.-||..| |+|+|+.++||++..++ +.++|||++..
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g-ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKAG-IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC-eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888532 2456677777788899999 99999999999998765 99999999874
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-11 Score=115.23 Aligned_cols=108 Identities=15% Similarity=0.131 Sum_probs=102.3
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
-+.++.-+|..++-.|++..|.+.|+++|+++|. +...|..+|..|+...+.++-..+|++|..+||++++.||.||..
T Consensus 325 ~A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm 403 (606)
T KOG0547|consen 325 MAEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQM 403 (606)
T ss_pred HHHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHH
Confidence 3888999999999999999999999999999999 777799999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+.-+++|++|+++|++|++|+|++.-+.-
T Consensus 404 ~flL~q~e~A~aDF~Kai~L~pe~~~~~i 432 (606)
T KOG0547|consen 404 RFLLQQYEEAIADFQKAISLDPENAYAYI 432 (606)
T ss_pred HHHHHHHHHHHHHHHHHhhcChhhhHHHH
Confidence 99999999999999999999999875543
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=7e-11 Score=98.07 Aligned_cols=144 Identities=16% Similarity=0.155 Sum_probs=104.8
Q ss_pred hhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC--------CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 30 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.+..+-+|+=+.|+++.+ .|+.+.||.=...... ...+..+|+++|.++.--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 345556777788998887 5777777752211111 1456889999999997555554444555555667999
Q ss_pred EcCCC-CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC---eEEccCCCcccC
Q 012608 102 EYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNS 175 (460)
Q Consensus 102 e~~~g-~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~DFg~a~~~ 175 (460)
||++| .++.+++...............++..|-..+.-||..+ |||+||..+||++..++. +.++|||++...
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd-iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND-IIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC-eecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99996 47888887644444444455788899999999999999 999999999999965443 589999997653
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.9e-11 Score=129.06 Aligned_cols=106 Identities=7% Similarity=-0.139 Sum_probs=101.3
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..+.+.|.++.+.|++++|+..|+++++++|+ ++.+++++|.++...|++++|+..|++|++++|+++.+++++|.+
T Consensus 608 ~~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~a 686 (987)
T PRK09782 608 SANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYV 686 (987)
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+..+|++++|+++|++|++++|++...
T Consensus 687 l~~lGd~~eA~~~l~~Al~l~P~~a~i 713 (987)
T PRK09782 687 NQRLDDMAATQHYARLVIDDIDNQALI 713 (987)
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCCchh
Confidence 999999999999999999999987643
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.1e-10 Score=100.16 Aligned_cols=107 Identities=16% Similarity=0.084 Sum_probs=93.1
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc--cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
...+..+...|..+...|+|++|+..|.+|+.+.|+. ...++.++|.++...|++++|+..|++|++++|.+..++.+
T Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~ 111 (168)
T CHL00033 32 EKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNN 111 (168)
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHH
Confidence 3578899999999999999999999999999886651 34589999999999999999999999999999999999999
Q ss_pred HHHHHH-------hcCChH-------HHHHHHHHhhhhhhhcc
Q 012608 426 QAAALS-------AMGMEN-------EAQVALKEGTTLEAKKN 454 (460)
Q Consensus 426 ~g~~~~-------~~~~~~-------~A~~~~~~al~l~~~~~ 454 (460)
+|.++. .+|+++ +|+..|++++.++|.+.
T Consensus 112 la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~~ 154 (168)
T CHL00033 112 MAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGNY 154 (168)
T ss_pred HHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCcccH
Confidence 999999 777876 56666667788888543
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.6e-10 Score=110.17 Aligned_cols=214 Identities=19% Similarity=0.170 Sum_probs=156.2
Q ss_pred CeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEe----eCCeeEEEEEcCCC-CCHHhhh
Q 012608 40 NVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC----EGDERLLVAEYMPN-ETLAKHL 113 (460)
Q Consensus 40 g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~lv~e~~~g-~sL~~~~ 113 (460)
.+.|+++ ..+|..|++|+++............-++.++++.|+|||++..++. .+..+++|++|.|+ +||.+..
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 5789998 5579999999996655444444556789999999999999999886 23568899999986 5676654
Q ss_pred hcc-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCC
Q 012608 114 FHW-------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKS 180 (460)
Q Consensus 114 ~~~-------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~ 180 (460)
... .+...++..+|.++.|+..||.++|+.| +..+-|.+.+||++.+.+++|+..|+........
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG-LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~- 447 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG-LACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP- 447 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC-ceeecccHhHeEeeCcceEEEecccceeeecCCC-
Confidence 321 1234678999999999999999999999 9889999999999999999999888766544333
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
+ +.+. --.+-|.=.||.+++.|.||..--. . ...........+....+.+++.++..
T Consensus 448 --~-------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~--~---------~d~~~~s~~~~I~~~yS~D~rn~v~y 504 (655)
T KOG3741|consen 448 --T-------EPLE---SQQQNDLRDLGLLLLALATGTENSN--R---------TDSTQSSHLTRITTTYSTDLRNVVEY 504 (655)
T ss_pred --C-------cchh---HHhhhhHHHHHHHHHHHhhcccccc--c---------ccchHHHHHHHhhhhhhHHHHHHHHH
Confidence 0 1111 1125688899999999999963210 0 00011111122344567889999999
Q ss_pred HcccCCCCCCChhHHHHHh
Q 012608 261 CLQYEPRERPNPKSLVTAL 279 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L 279 (460)
....++.+ -+..+++..+
T Consensus 505 l~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 505 LESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHhcCccc-ccHHHHHHHH
Confidence 99999887 6777877643
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.9e-11 Score=122.69 Aligned_cols=98 Identities=10% Similarity=-0.067 Sum_probs=48.0
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
+.++..+|..+...|++++|+..|++|++++|+ ++.+++++|.++...|++++|+..+++|++++|.++.+++.++.++
T Consensus 338 ~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~~~~~ 416 (553)
T PRK12370 338 PQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWIT 416 (553)
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHHHHHH
Confidence 344444444444445555555555555555555 4444444455555555555555555555555555444444444444
Q ss_pred HhcCChHHHHHHHHHhhhh
Q 012608 431 SAMGMENEAQVALKEGTTL 449 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l 449 (460)
+.+|++++|++.++++++.
T Consensus 417 ~~~g~~eeA~~~~~~~l~~ 435 (553)
T PRK12370 417 YYHTGIDDAIRLGDELRSQ 435 (553)
T ss_pred HhccCHHHHHHHHHHHHHh
Confidence 4444555555555554444
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=7.1e-12 Score=128.23 Aligned_cols=245 Identities=18% Similarity=0.128 Sum_probs=175.5
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
..++...+++-+-+|+++.++.+. -..|...++|+.... ...+.+....+-.++-...+|-++...-.+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 356667778888899999999887 334544444443221 1112223333333433345566666665566677889
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 177 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~- 177 (460)
++++|..|++|...++ ..+..+.+-....+..+..++++||+.. ++|+|++|.|.++..++..++.|||.....+-
T Consensus 881 L~~~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~~-r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSSL-RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hhhHHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccch-hhcccccccchhhcccCCcccCccccccccccc
Confidence 9999999999988886 3445666677777888899999999998 89999999999999999999999984321110
Q ss_pred ----------------------------------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCC
Q 012608 178 ----------------------------------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS 223 (460)
Q Consensus 178 ----------------------------------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~ 223 (460)
.....+|+.|.+||...+......+|.|++|+++++.++|..||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0123467899999999999999999999999999999999998876
Q ss_pred hhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChh
Q 012608 224 HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 273 (460)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 273 (460)
...+..-....... .....-+...+.+..+++...+..+|.+|..+.
T Consensus 1038 ~tpq~~f~ni~~~~---~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQQIFENILNRD---IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cchhhhhhccccCC---CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 65544433322221 122233445678899999999999999996554
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.21 E-value=9.8e-11 Score=101.01 Aligned_cols=126 Identities=17% Similarity=0.181 Sum_probs=85.2
Q ss_pred eEEEEEEcCCcEEEEEEecCCCCC----------------------C----HHHHHHHHHHHhcCCCC--ccceeeeEEe
Q 012608 41 VVYKGKLENQRRIAVKRFNRMAWP----------------------D----PRQFLEEARSVGQLRNN--RLTNLLGCCC 92 (460)
Q Consensus 41 ~Vy~~~~~~~~~vavK~~~~~~~~----------------------~----~~~~~~E~~~l~~l~h~--~iv~~~~~~~ 92 (460)
.||.|...+|..+|||+.+..... . .....+|.+.|.++..- ++++++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 389999888999999987532111 0 13577999999999655 577777653
Q ss_pred eCCeeEEEEEcCC--CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCcccccccCCcEEEcCCCCeEEccC
Q 012608 93 EGDERLLVAEYMP--NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY-CTSKGRALYHDLNAYRILFDEDGNPRLSTF 169 (460)
Q Consensus 93 ~~~~~~lv~e~~~--g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~-lH~~~~iiH~Dikp~Nill~~~~~~kl~DF 169 (460)
..++||||++ |..+..+.. ..++......++.+++..+.. +|..| ++|+|+.+.||+++++ .+.++||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~----~~~~~~~~~~~~~~il~~~~~~~~~~g-ivHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKD----VDLSPEEPKELLEEILEEIIKMLHKAG-IVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHH----CGGGGSTHHHHHHHHHHHHHHHHHCTT-EEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHHh----ccccchhHHHHHHHHHHHHHHHHHhcC-ceecCCChhhEEeecc-eEEEEec
Confidence 3479999998 666655432 122234556677788885665 57888 9999999999999987 8999999
Q ss_pred CCcccCC
Q 012608 170 GLMKNSR 176 (460)
Q Consensus 170 g~a~~~~ 176 (460)
|.+....
T Consensus 151 ~qav~~~ 157 (188)
T PF01163_consen 151 GQAVDSS 157 (188)
T ss_dssp TTEEETT
T ss_pred CcceecC
Confidence 9876654
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.5e-10 Score=104.48 Aligned_cols=133 Identities=12% Similarity=0.109 Sum_probs=98.9
Q ss_pred CeEEEEEEcCCcEEEEEEecCCCCC-----------CHHHHHHHHHHHhcCCCCc--cceeeeEEee-----CCeeEEEE
Q 012608 40 NVVYKGKLENQRRIAVKRFNRMAWP-----------DPRQFLEEARSVGQLRNNR--LTNLLGCCCE-----GDERLLVA 101 (460)
Q Consensus 40 g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~~--iv~~~~~~~~-----~~~~~lv~ 101 (460)
..|.+... +|+.+.||........ ....+.+|...+.+|..-+ ++.++++.+. ....++||
T Consensus 36 rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 36 RRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred ceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 34666655 6788999977443311 1124789999999985444 3444555543 23468999
Q ss_pred EcCCCC-CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-------CCCeEEccCCCcc
Q 012608 102 EYMPNE-TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-------DGNPRLSTFGLMK 173 (460)
Q Consensus 102 e~~~g~-sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-------~~~~kl~DFg~a~ 173 (460)
|+++|. +|.+++..+...+.+......++.+++..+.-||..| |+|+|+++.|||++. ++.+.|+||+.+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G-i~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG-INHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc-CccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999975 8999886433445667778899999999999999999 999999999999975 4678999999775
Q ss_pred c
Q 012608 174 N 174 (460)
Q Consensus 174 ~ 174 (460)
.
T Consensus 194 ~ 194 (268)
T PRK15123 194 I 194 (268)
T ss_pred c
Confidence 3
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.1e-11 Score=98.22 Aligned_cols=86 Identities=15% Similarity=0.014 Sum_probs=81.3
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..+...+..+|.++.+.|+|++|+..|+++++++|+ ++.+++++|.|+..+|++++|+..|++|++++|+++.++.++|
T Consensus 55 P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~~~~~~ 133 (144)
T PRK15359 55 PWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQ 133 (144)
T ss_pred CCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 357889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcC
Q 012608 428 AALSAMG 434 (460)
Q Consensus 428 ~~~~~~~ 434 (460)
.+...++
T Consensus 134 ~~~~~l~ 140 (144)
T PRK15359 134 NAQIMVD 140 (144)
T ss_pred HHHHHHH
Confidence 9876653
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-10 Score=94.69 Aligned_cols=103 Identities=9% Similarity=-0.054 Sum_probs=97.5
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
...+..+..|..++.+|+|++|...|+-..-.+|. ++.++..+|.|+..+++|++|+..|..|..++++++...|+.|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 56778899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
|+..+|+.++|..+|+.|+. .|..
T Consensus 114 C~l~l~~~~~A~~~f~~a~~-~~~~ 137 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNE-RTED 137 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHh-Ccch
Confidence 99999999999999999997 4443
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=119.93 Aligned_cols=106 Identities=6% Similarity=-0.071 Sum_probs=53.6
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++.++..+|.+..+.|.|++|...+..+++++|+ +..++.+++.++.+.+++++|+..+++++..+|+++.+++.+|.
T Consensus 84 ~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~~a~ 162 (694)
T PRK15179 84 HTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILLEAK 162 (694)
T ss_pred ccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 33444555555555555555555555555555555 44455555555555555555555555555555555555555555
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
++.++|+|++|++.|+++++-+|++.+
T Consensus 163 ~l~~~g~~~~A~~~y~~~~~~~p~~~~ 189 (694)
T PRK15179 163 SWDEIGQSEQADACFERLSRQHPEFEN 189 (694)
T ss_pred HHHHhcchHHHHHHHHHHHhcCCCcHH
Confidence 555555555555555555544444433
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-10 Score=118.51 Aligned_cols=107 Identities=15% Similarity=-0.009 Sum_probs=88.7
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC-CcchHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-PIWHIASYLQA 427 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~-p~~~~a~~~~g 427 (460)
.++..+..+|..+...|++++|+..|+++++++|. ++.++..++.+++..|++++|+..++++++.+ |+++.++.++|
T Consensus 370 ~~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~-~~~~~~~~~~~~~~~g~~eeA~~~~~~~l~~~~p~~~~~~~~la 448 (553)
T PRK12370 370 ISADIKYYYGWNLFMAGQLEEALQTINECLKLDPT-RAAAGITKLWITYYHTGIDDAIRLGDELRSQHLQDNPILLSMQV 448 (553)
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-ChhhHHHHHHHHHhccCHHHHHHHHHHHHHhccccCHHHHHHHH
Confidence 45678888899999999999999999999999998 66666666666777888999999999988775 78888889999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
.++..+|++++|.+.+++.+..+|....+
T Consensus 449 ~~l~~~G~~~eA~~~~~~~~~~~~~~~~~ 477 (553)
T PRK12370 449 MFLSLKGKHELARKLTKEISTQEITGLIA 477 (553)
T ss_pred HHHHhCCCHHHHHHHHHHhhhccchhHHH
Confidence 99999999999999998888777765443
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.3e-10 Score=105.79 Aligned_cols=107 Identities=17% Similarity=0.103 Sum_probs=98.4
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccH---HHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchH---H
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---A 422 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~---a 422 (460)
+.+..++..|..++..|+|++|+..|++++..+|+ ++ .+++.+|.++...|++++|+..++++++.+|+++. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 45678899999999999999999999999999998 44 57899999999999999999999999999998877 7
Q ss_pred HHHHHHHHHhc--------CChHHHHHHHHHhhhhhhhcccc
Q 012608 423 SYLQAAALSAM--------GMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 423 ~~~~g~~~~~~--------~~~~~A~~~~~~al~l~~~~~~a 456 (460)
++.+|.++..+ |++++|++.|+++++.+|++..+
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 151 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSEYA 151 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCChhH
Confidence 99999999987 88999999999999999998654
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.4e-11 Score=117.33 Aligned_cols=106 Identities=18% Similarity=0.124 Sum_probs=75.7
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
++-.+|+..|.+|.++++|+.|.-.|++|+++||. +..+..-.|..+.++|+.++|+..+++|+.+||.++-.-|.+|.
T Consensus 487 rhYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~-nsvi~~~~g~~~~~~k~~d~AL~~~~~A~~ld~kn~l~~~~~~~ 565 (638)
T KOG1126|consen 487 RHYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPS-NSVILCHIGRIQHQLKRKDKALQLYEKAIHLDPKNPLCKYHRAS 565 (638)
T ss_pred hhhHHHHhhhhheeccchhhHHHHHHHhhhcCCcc-chhHHhhhhHHHHHhhhhhHHHHHHHHHHhcCCCCchhHHHHHH
Confidence 56667777777777777777777777777777777 66666666677777777777777777777777777777777777
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
++..+++|++|+..+++.-++-|++..
T Consensus 566 il~~~~~~~eal~~LEeLk~~vP~es~ 592 (638)
T KOG1126|consen 566 ILFSLGRYVEALQELEELKELVPQESS 592 (638)
T ss_pred HHHhhcchHHHHHHHHHHHHhCcchHH
Confidence 777777777777777777776666543
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.15 E-value=9.6e-11 Score=83.11 Aligned_cols=63 Identities=19% Similarity=0.082 Sum_probs=43.5
Q ss_pred hHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 391 RRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 391 ~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
.+|..++..|++++|++.|+++++.+|+++.+|+.+|.++..+|++++|+..|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 356666777777777777777777777777777777777777777777777777777777765
|
|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.8e-11 Score=105.99 Aligned_cols=109 Identities=22% Similarity=0.244 Sum_probs=102.6
Q ss_pred hhhhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHH
Q 012608 344 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 423 (460)
Q Consensus 344 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~ 423 (460)
-.+.+..+...+..+...+..|+++.||+.|+.||+++|. ...+|.+++.+++++++...|++||+.|+++||+.++.|
T Consensus 107 Tee~~eqa~e~k~~A~eAln~G~~~~ai~~~t~ai~lnp~-~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~Dsa~~y 185 (377)
T KOG1308|consen 107 TEEMMDQANDKKVQASEALNDGEFDTAIELFTSAIELNPP-LAILYAKRASVFLKLKKPNAAIRDCDFAIEINPDSAKGY 185 (377)
T ss_pred hHHHHHHHHHHHHHHHHHhcCcchhhhhcccccccccCCc-hhhhcccccceeeeccCCchhhhhhhhhhccCccccccc
Confidence 3455677778899999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 424 YLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 424 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
-.+|.++..+|+|++|..+|..|.++|-+-
T Consensus 186 kfrg~A~rllg~~e~aa~dl~~a~kld~dE 215 (377)
T KOG1308|consen 186 KFRGYAERLLGNWEEAAHDLALACKLDYDE 215 (377)
T ss_pred chhhHHHHHhhchHHHHHHHHHHHhccccH
Confidence 999999999999999999999999997654
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.1e-10 Score=100.66 Aligned_cols=95 Identities=16% Similarity=0.086 Sum_probs=88.6
Q ss_pred hhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH-HhcCC--hHHH
Q 012608 363 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL-SAMGM--ENEA 439 (460)
Q Consensus 363 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~-~~~~~--~~~A 439 (460)
..++.++++..+.++++.+|+ +...|..+|.+|...|++++|+..|++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 367889999999999999999 8999999999999999999999999999999999999999999985 67787 5999
Q ss_pred HHHHHHhhhhhhhcccccC
Q 012608 440 QVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 440 ~~~~~~al~l~~~~~~a~~ 458 (460)
.+.|++|++++|++..++.
T Consensus 130 ~~~l~~al~~dP~~~~al~ 148 (198)
T PRK10370 130 REMIDKALALDANEVTALM 148 (198)
T ss_pred HHHHHHHHHhCCCChhHHH
Confidence 9999999999999987653
|
|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.9e-10 Score=102.75 Aligned_cols=106 Identities=10% Similarity=0.002 Sum_probs=95.5
Q ss_pred HHHhHHhhhHH-HhhCCHHHHHHHHHHHhhcCCCcc--HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCc---chHHHH
Q 012608 351 TLNSKKKGDVA-FRQKDLKDAIECYTQFIDAGTMVS--PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI---WHIASY 424 (460)
Q Consensus 351 ~~~~~~~g~~~-~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~---~~~a~~ 424 (460)
...++..|..+ ++.|+|++|+..|++.++..|+.. +.+++.+|.+|+..|++++|+..|+++++..|+ .+++++
T Consensus 142 e~~~Y~~A~~l~~~~~~y~~Ai~af~~fl~~yP~s~~a~~A~y~LG~~y~~~g~~~~A~~~f~~vv~~yP~s~~~~dAl~ 221 (263)
T PRK10803 142 ANTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPDSTYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMF 221 (263)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCcchhHHHH
Confidence 45667788876 667999999999999999999932 578999999999999999999999999999887 589999
Q ss_pred HHHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 425 LQAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 425 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
++|.++..+|++++|++.|+++++..|+...|
T Consensus 222 klg~~~~~~g~~~~A~~~~~~vi~~yP~s~~a 253 (263)
T PRK10803 222 KVGVIMQDKGDTAKAKAVYQQVIKKYPGTDGA 253 (263)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCCHHH
Confidence 99999999999999999999999999988755
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.7e-09 Score=99.47 Aligned_cols=250 Identities=17% Similarity=0.164 Sum_probs=159.6
Q ss_pred chhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccce--------eeeEEeeCCeeEE
Q 012608 29 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTN--------LLGCCCEGDERLL 99 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~--------~~~~~~~~~~~~l 99 (460)
...+.||+|+-+.+|-.--- + ..+-|+++..-.... ..-+..|... .||-+-. ++|- ..+....+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~-d~VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~-~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-R-DQVAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGG-RRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchh-h-chhheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCC-CccceeEE
Confidence 34577899999998865411 1 134577765432221 2233444444 5665433 1221 12223678
Q ss_pred EEEcCCCC-CHHhhhhc----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 100 VAEYMPNE-TLAKHLFH----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 100 v~e~~~g~-sL~~~~~~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
.|..++|. .+..+..- +.-....|+..+++.+.++.+.+.||..| .+-+|+.++|+|+++++.+.|.|-.....
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G-h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG-HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC-CcccccCccceeeecCceEEEEcccceee
Confidence 88888764 22222221 11234679999999999999999999999 88899999999999999999998654333
Q ss_pred CCCCC---CccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhC-CCCCCChhh--------h-hhhhccccc
Q 012608 175 SRDGK---SYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSG-KHIPPSHAL--------D-LIRDRNLQM 236 (460)
Q Consensus 175 ~~~~~---~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg-~~p~~~~~~--------~-~~~~~~~~~ 236 (460)
..++. .-.|...|++||.-. +..-+..+|.|.||+++++++.| ++||.+--. + .+....+..
T Consensus 167 ~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~y 246 (637)
T COG4248 167 NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAY 246 (637)
T ss_pred ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeee
Confidence 33333 335678899999754 34467789999999999999887 777754211 0 111111111
Q ss_pred cc------cccccCCCCchhHHHHHHHHHHHcccC--CCCCCChhHHHHHhcccccc
Q 012608 237 LT------DSCLEGQFTDDDGTELVRLASRCLQYE--PRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 237 ~~------~~~~~~~~~~~~~~~l~~li~~~l~~~--p~~Rps~~~il~~L~~~~~~ 285 (460)
-. .+.+......-+++++..+..+|+... +.-|||++..+..|..+..+
T Consensus 247 a~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~ 303 (637)
T COG4248 247 ASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQ 303 (637)
T ss_pred chhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHh
Confidence 00 111111112245789999999999654 56899999999888776554
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.6e-10 Score=96.81 Aligned_cols=102 Identities=14% Similarity=-0.004 Sum_probs=96.3
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
+.+.+...+|..|++.|++..|...+++||+.||+ +..+|..++..|.+.|+.+.|-+.|++|+.++|++.+.++|.|.
T Consensus 33 ~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~ 111 (250)
T COG3063 33 EAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGA 111 (250)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhH
Confidence 45667889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhh
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
.++.+|++++|...|++|+. +|.
T Consensus 112 FLC~qg~~~eA~q~F~~Al~-~P~ 134 (250)
T COG3063 112 FLCAQGRPEEAMQQFERALA-DPA 134 (250)
T ss_pred HHHhCCChHHHHHHHHHHHh-CCC
Confidence 99999999999999999995 444
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.12 E-value=2e-10 Score=81.42 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=60.6
Q ss_pred HHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcch
Q 012608 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 420 (460)
Q Consensus 355 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 420 (460)
+.+|..+++.|+|++|+..|+++++.+|+ +..+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 1 ~~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 1 YALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred ChHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 36799999999999999999999999999 999999999999999999999999999999999985
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 460 | ||||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-24 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 3e-24 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 8e-23 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 9e-23 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 1e-22 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 1e-20 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-19 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 5e-19 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 1e-13 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 2e-13 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-13 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-13 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-13 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-13 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-13 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-12 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 3e-12 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 3e-12 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-11 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-11 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 2e-11 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 2e-11 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 2e-11 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 3e-11 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 3e-11 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 5e-11 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 6e-11 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 6e-11 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 6e-11 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 7e-11 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 7e-11 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 9e-11 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 1e-10 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 1e-10 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-10 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 1e-10 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 1e-10 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 1e-10 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-10 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 2e-10 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 2e-10 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 2e-10 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 2e-10 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 2e-10 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 3e-10 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 3e-10 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 3e-10 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 3e-10 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 3e-10 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 3e-10 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 3e-10 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 3e-10 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 3e-10 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 3e-10 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 3e-10 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 4e-10 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 4e-10 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 4e-10 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 4e-10 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 4e-10 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 5e-10 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 6e-10 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 6e-10 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-10 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 7e-10 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 7e-10 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 8e-10 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 9e-10 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 9e-10 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 1e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 1e-09 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 1e-09 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-09 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 1e-09 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 1e-09 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 1e-09 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-09 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 1e-09 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-09 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 2e-09 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-09 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-09 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-09 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 2e-09 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-09 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-09 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 2e-09 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 2e-09 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-09 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-09 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-09 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 2e-09 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-09 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 2e-09 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 2e-09 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-09 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-09 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 3e-09 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 3e-09 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 3e-09 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 4e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 4e-09 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 5e-09 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 5e-09 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 5e-09 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 5e-09 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 5e-09 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 6e-09 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 6e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 6e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 6e-09 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 6e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 6e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 7e-09 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 8e-09 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 8e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 9e-09 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 9e-09 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-08 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 1e-08 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 1e-08 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-08 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 1e-08 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-08 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 1e-08 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 1e-08 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 2e-08 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-08 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 2e-08 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-08 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-08 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 2e-08 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-08 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 3e-08 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 4e-08 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 5e-08 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 5e-08 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 5e-08 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 6e-08 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 6e-08 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 7e-08 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 9e-08 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 9e-08 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 9e-08 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 1e-07 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 1e-07 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 1e-07 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 1e-07 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 1e-07 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-07 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 2e-07 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 2e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 2e-07 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-07 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 4e-07 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 4e-07 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 4e-07 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 4e-07 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 4e-07 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 4e-07 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 5e-07 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 5e-07 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 5e-07 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-07 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-07 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 5e-07 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 5e-07 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 5e-07 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 5e-07 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 5e-07 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 6e-07 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 6e-07 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 6e-07 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 6e-07 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 6e-07 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 6e-07 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 6e-07 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 7e-07 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 8e-07 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 8e-07 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 8e-07 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 9e-07 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 9e-07 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 9e-07 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 9e-07 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 1e-06 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 1e-06 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 1e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 1e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 1e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 1e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 1e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 1e-06 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 1e-06 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-06 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 2e-06 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-06 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 2e-06 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-06 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-06 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-06 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-06 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 2e-06 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-06 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 2e-06 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 2e-06 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 2e-06 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 2e-06 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-06 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 2e-06 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-06 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 2e-06 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-06 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-06 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 2e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-06 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 2e-06 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 2e-06 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 2e-06 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 3e-06 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-06 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 3e-06 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 3e-06 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-06 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 3e-06 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-06 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 3e-06 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 3e-06 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-06 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 3e-06 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 3e-06 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 4e-06 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 4e-06 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 4e-06 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 4e-06 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-06 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 4e-06 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 4e-06 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 4e-06 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 4e-06 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 4e-06 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 4e-06 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 4e-06 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 4e-06 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 5e-06 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 5e-06 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 5e-06 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 5e-06 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 5e-06 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 5e-06 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 6e-06 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 6e-06 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 6e-06 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 6e-06 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 8e-06 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 8e-06 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 9e-06 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 9e-06 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 9e-06 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 1e-05 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 1e-05 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 1e-05 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 1e-05 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-05 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 1e-05 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 1e-05 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 1e-05 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 1e-05 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 1e-05 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 1e-05 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 1e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 1e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 1e-05 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 1e-05 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-05 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-05 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 2e-05 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 3e-05 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 3e-05 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 3e-05 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 3e-05 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 3e-05 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 3e-05 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-05 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 3e-05 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 3e-05 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 3e-05 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 4e-05 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 4e-05 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 4e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 4e-05 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-05 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 5e-05 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 5e-05 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 5e-05 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 5e-05 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 6e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 6e-05 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 7e-05 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 7e-05 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 7e-05 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 9e-05 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-04 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-04 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 1e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-04 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-04 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 1e-04 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 1e-04 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 1e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-04 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 1e-04 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 2e-04 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 2e-04 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-04 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-04 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 2e-04 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 2e-04 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 2e-04 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 2e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 3e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 3e-04 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 3e-04 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 3e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 3e-04 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 3e-04 | ||
| 1elw_A | 118 | Crystal Structure Of The Tpr1 Domain Of Hop In Comp | 4e-04 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 4e-04 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-04 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 5e-04 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 6e-04 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 6e-04 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 6e-04 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 6e-04 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 6e-04 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 6e-04 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-04 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 7e-04 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-04 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 7e-04 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-04 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 7e-04 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 7e-04 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 8e-04 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 8e-04 |
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1 Domain Of Hop In Complex With A Hsc70 Peptide Length = 118 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 2e-61
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 40/306 (13%)
Query: 8 PSFREFTLEQLKNATSGFAVENIVSEH---GEKAPNVVYKGKLENQRRIAVKRFNRMAWP 64
F F+ +LKN T+ F I GE VVYKG + N +AVK+ M
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDI 68
Query: 65 DP----RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE-TH 119
+QF +E + + + ++ L LLG +GD+ LV YMPN +L L + T
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 120 PMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR------ILFDEDGNPRLSTFGLMK 173
P+ W MR ++ A + + L+ + + +R IL DE ++S FGL +
Sbjct: 129 PLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 174 -NSRDGKSY-STNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK-----HIPP 222
+ + ++ ++ + T PE L G +TP+S IYSFG +LL++++G H P
Sbjct: 182 ASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 223 SHALD-----LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277
LD ++ ++ D + + +AS+CL + +RP+ K +
Sbjct: 241 QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 278 ALSPLQ 283
L +
Sbjct: 300 LLQEMT 305
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 8e-61
Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 26/292 (8%)
Query: 11 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-DPRQF 69
+ F+L +L+ A+ F+ +NI+ G VYKG+L + +AVKR QF
Sbjct: 18 KRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQF 74
Query: 70 LEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF--HWETHPMKWAMRL 127
E + + L L G C ERLLV YM N ++A L P+ W R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134
Query: 128 RVVLHLAQALEY--CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY-STN 184
R+ L A+ L Y + ++ D+ A IL DE+ + FGL K ++ +T
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 194
Query: 185 LAFT----PPEYLRTGRVTPESVIYSFGTLLLDLLSGK-----HIPP--------SHALD 227
+ T PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 195 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 228 LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
L++++ L+ L D L+G + D++ +L+++A C Q P ERP +V L
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 2e-58
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 23/288 (7%)
Query: 11 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFL 70
L L+ AT+ F + ++ G VYKG L + ++A+KR + +F
Sbjct: 27 YRVPLVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 71 EEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLF--HWETHPMKWAMRLR 128
E ++ R+ L +L+G C E +E +L+ +YM N L +HL+ T M W RL
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 129 VVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSY-STNLA 186
+ + A+ L Y ++ D+ + IL DE+ P+++ FG+ K + +++ ST +
Sbjct: 144 ICIGAARGLHY-LHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVK 202
Query: 187 FTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGK----HIPPSH-------ALDLIRD 231
T PEY GR+T +S +YSFG +L ++L + P A++ +
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 232 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
L+ + D L + + + A +CL +RP+ ++ L
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 1e-26
Identities = 51/325 (15%), Positives = 104/325 (32%), Gaps = 57/325 (17%)
Query: 9 SFREFTLEQLKNATSGFAVENIVSE--HGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDP 66
S + E L + + + + G V+K +L N+ +AVK F D
Sbjct: 10 SGVDLGTENLYFQSMPLQLLEVKARGRFGC-----VWKAQLLNEY-VAVKIFP---IQDK 60
Query: 67 RQFLEEA--RSVGQLRNNRLTNLLGCCCEGD----ERLLVAEYMPNETLAKHLFHWETHP 120
+ + E S+ +++ + +G G + L+ + +L+ L +
Sbjct: 61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NV 117
Query: 121 MKWAMRLRVVLHLAQALEYCTSKGRALY--------H-DLNAYRILFDEDGNPRLSTFGL 171
+ W + +A+ L Y L H D+ + +L + ++ FGL
Sbjct: 118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177
Query: 172 MKNSRDGKSYSTNLAFT------PPEYLRTGRVTPESV-----IYSFGTLLLDLLSGK-- 218
GKS PE L +Y+ G +L +L S
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA 237
Query: 219 --------------HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT-ELVRLASRCLQ 263
I +L+ +++ + L + G L C
Sbjct: 238 ADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD 297
Query: 264 YEPRERPNPKSLVTALSPLQKETEV 288
++ R + + ++ +Q+ T +
Sbjct: 298 HDAEARLSAGCVGERITQMQRLTNI 322
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 6e-25
Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 24/258 (9%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
++KG+ + I VK W R F EE + + + +LG C
Sbjct: 25 ELWKGRWQGND-IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 99 L--VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 155
+ +MP +L L + + ++ L +A+ + + + + LN+
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESV---IYSFGTLLL 212
++ DED R+S + K S A+ PE L+ ++SF LL
Sbjct: 144 VMIDEDMTARISMADV-KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLW 202
Query: 213 DLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267
+L++ + + + L+ + + +L C+ +P
Sbjct: 203 ELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICMNEDPA 253
Query: 268 ERPNPKSLVTALSPLQKE 285
+RP +V L +Q +
Sbjct: 254 KRPKFDMIVPILEKMQDK 271
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 1e-24
Identities = 52/264 (19%), Positives = 109/264 (41%), Gaps = 23/264 (8%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
V++ + +AVK + +FL E + +LR+ + +G +
Sbjct: 52 TVHRAEWHGSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 99 LVAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRI 156
+V EY+ +L + L + RL + +A+ + Y ++ + H +L + +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170
Query: 157 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLL 212
L D+ ++ FGL + S + A TP PE LR +S +YSFG +L
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 213 DLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267
+L + + ++ P+ + + + ++ + + ++ + C EP
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWTNEPW 281
Query: 268 ERPNPKSLVTALSPLQKETEVPSH 291
+RP+ +++ L PL K P +
Sbjct: 282 KRPSFATIMDLLRPLIKSAVPPPN 305
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 1e-23
Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 28/261 (10%)
Query: 42 VYKGKLENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL- 98
VYKGK +AVK N + F E + + R+ + +G +L
Sbjct: 40 VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLA 95
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 157
+V ++ +L HL H + + + A+ ++Y +K + H DL + I
Sbjct: 96 IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIF 152
Query: 158 FDEDGNPRLSTFGL--MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESV---IYSFG 208
ED ++ FGL K+ G L+ + PE +R P S +Y+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 209 TLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 264
+L +L++G+ +I + + R S + + + RL + CL+
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS----KVRSNCPKRMKRLMAECLKK 268
Query: 265 EPRERPNPKSLVTALSPLQKE 285
+ ERP+ ++ + L +E
Sbjct: 269 KRDERPSFPRILAEIEELARE 289
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 1e-21
Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 31/259 (11%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VV K K + +A+K+ + + F+ E R + ++ + + L G C + LV
Sbjct: 23 VVCKAKWRAKD-VAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77
Query: 101 AEYMPNETLAKHLFHWETHP-MKWAMRLRVVLHLAQALEYC-TSKGRALYH-DLNAYRIL 157
EY +L L E P A + L +Q + Y + + +AL H DL +L
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 158 FDEDGN-PRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLL 212
G ++ FG + D +++ TN + PE + + ++S+G +L
Sbjct: 138 LVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194
Query: 213 DLLSGK------HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 266
++++ + P + + + L + + + L +RC +P
Sbjct: 195 EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRCWSKDP 245
Query: 267 RERPNPKSLVTALSPLQKE 285
+RP+ + +V ++ L +
Sbjct: 246 SQRPSMEEIVKIMTHLMRY 264
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 93.4 bits (232), Expect = 3e-21
Identities = 58/343 (16%), Positives = 103/343 (30%), Gaps = 68/343 (19%)
Query: 12 EFTLEQLKNATSGFAVENIVSE--HGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQF 69
E + + ++ +G VYKG L+ + +AVK F+ + + + F
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDERP-VAVKVFS---FANRQNF 52
Query: 70 LEEAR--SVGQLRNNRLTNLLGCCCEGD-----ERLLVAEYMPNETLAKHLFHWETHPMK 122
+ E V + ++ + + E LLV EY PN +L K+L H
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSD 109
Query: 123 WAMRLRVVLHLAQALEY-------CTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL--- 171
W R+ + + L Y A+ H DLN+ +L DG +S FGL
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 172 -----MKNSRDGKSYSTNLAFTP----PEYLR-------TGRVTPESVIYSFGTLLLDLL 215
+ + + + + T PE L + +Y+ G + ++
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 216 SGKHI-----------PPSHALDLIRDRNLQMLTDSCLEGQ-------FTDDDGT--ELV 255
M E Q + ++ L
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289
Query: 256 RLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH 298
C + R + ++ L E V H
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAHH 332
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 92.4 bits (230), Expect = 5e-21
Identities = 47/272 (17%), Positives = 88/272 (32%), Gaps = 38/272 (13%)
Query: 42 VYKGKLENQRR-IAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
K + +K R R FL+E + + L + + +G + +
Sbjct: 26 AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 159
EY+ TL + W+ R+ +A + Y S + H DLN++ L
Sbjct: 86 TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142
Query: 160 EDGNPRLSTFGL--------------MKNSRDGKSYSTNLAFTP----PEYLRTGRVTPE 201
E+ N ++ FGL + + + P PE + +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 202 SVIYSFGTLLLDLLSGKHIPP-----SHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELV 255
++SFG +L +++ + P + L L +C
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP---------SFF 253
Query: 256 RLASRCLQYEPRERPNPKSLVTALSPLQKETE 287
+ RC +P +RP+ L L L+
Sbjct: 254 PITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 1e-20
Identities = 49/263 (18%), Positives = 95/263 (36%), Gaps = 40/263 (15%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDP----RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
VY+ +AVK D +EA+ L++ + L G C +
Sbjct: 22 KVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAY 154
LV E+ L + L + + + + +A+ + Y + ++ DL +
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 155 RILFDEDGNPRLST--------FGLMKNSRD-GKSYSTNLAFTP----PEYLRTGRVTPE 201
IL + + FGL +R+ ++ + A PE +R +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194
Query: 202 SVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVR 256
S ++S+G LL +LL+G+ I + L + + +C E +
Sbjct: 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAK 245
Query: 257 LASRCLQYEPRERPNPKSLVTAL 279
L C +P RP+ +++ L
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQL 268
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 2e-20
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 42/269 (15%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDP-------RQFLEEARSVGQLRNNRLTNLLGCCC 92
+V+KG+ ++++ +A+K ++F E + L + + L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 93 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL 151
+V E++P L L + HP+KW+++LR++L +A +EY ++ + H DL
Sbjct: 94 NPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 152 NAYRILFDEDGNPRLST-----FGLMKNSRDGKSYSTNLAFTP----PEYL--RTGRVTP 200
+ I FGL S+ + L PE + T
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTE 207
Query: 201 ESVIYSFGTLLLDLLSGK----HIPPSHA--LDLIRDRNLQM-LTDSCLEGQFTDDDGTE 253
++ YSF +L +L+G+ +++IR+ L+ + + C
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP---------R 258
Query: 254 LVRLASRCLQYEPRERPNPKSLVTALSPL 282
L + C +P++RP+ +V LS L
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 3e-20
Identities = 46/279 (16%), Positives = 90/279 (32%), Gaps = 45/279 (16%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDP-----RQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
VY G+ + +A++ + + F E + Q R+ + +G C
Sbjct: 48 QVYHGRWHGE--VAIRLID---IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 154
++ TL + + ++ + + + Y +KG + H DL +
Sbjct: 103 HLAIITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAKG--ILHKDLKSK 159
Query: 155 RILFDEDGNPRLSTFGL--MKNSRDGKSYSTNLAFTP-------PEYLRTGRVTPESV-- 203
+ +D +G ++ FGL + L PE +R E
Sbjct: 160 NVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKL 218
Query: 204 -------IYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252
+++ GT+ +L + + P + + L+ G
Sbjct: 219 PFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI--------GMGK 270
Query: 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSH 291
E+ + C +E ERP L+ L L K SH
Sbjct: 271 EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 86.7 bits (215), Expect = 2e-18
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 26/258 (10%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ G R+A+K P FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 160
EYM +L L ++ + + +A + Y H DL A IL E
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
+ +++ FGL + D + + A +T PE GR T +S ++SFG LL +L
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 216 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
+ +P LD + +R +M C E L L +C + EP ER
Sbjct: 376 TKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEER 425
Query: 270 PNPKSLVTALSPLQKETE 287
P + L L TE
Sbjct: 426 PTFEYLQAFLEDYFTSTE 443
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 3e-18
Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 26/260 (10%)
Query: 42 VYKGKLENQR-RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VY+G + +AVK + + +FL+EA + ++++ L LLG C ++
Sbjct: 236 VYEGVWKKYSLTVAVKT-LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 159
E+M L +L + + L + ++ A+EY K H +L A L
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352
Query: 160 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 214
E+ +++ FGL + + A +T PE L + + +S +++FG LL ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 215 LSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 268
+ P S +L+ +++ +M + C E ++ L C Q+ P +
Sbjct: 413 ATYGMSPYPGIDLSQVYELL-EKDYRMERPEGCPE---------KVYELMRACWQWNPSD 462
Query: 269 RPNPKSLVTALSPLQKETEV 288
RP+ + A + +E+ +
Sbjct: 463 RPSFAEIHQAFETMFQESSI 482
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 4e-18
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 26/258 (10%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ ++AVK + FL EA + L++++L L + + ++
Sbjct: 204 VWMATYNKHTKVAVKT-MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 160
E+M +L L E + +A+ + + + H DL A IL
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
+++ FGL + D + + A +T PE + G T +S ++SFG LL++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 216 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
+ IP + + +R +M ++C E EL + RC + P ER
Sbjct: 380 TYGRIPYPGMSNPEVIRAL-ERGYRMPRPENCPE---------ELYNIMMRCWKNRPEER 429
Query: 270 PNPKSLVTALSPLQKETE 287
P + + + L TE
Sbjct: 430 PTFEYIQSVLDDFYTATE 447
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 85.7 bits (212), Expect = 5e-18
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 26/258 (10%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ G R+A+K P FL+EA+ + +LR+ +L L E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 160
EYM +L L ++ + + +A + Y H DL A IL E
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
+ +++ FGL + D + + A +T PE GR T +S ++SFG LL +L
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 216 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
+ +P LD + +R +M C E L L +C + EP ER
Sbjct: 459 TKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPE---------SLHDLMCQCWRKEPEER 508
Query: 270 PNPKSLVTALSPLQKETE 287
P + L L TE
Sbjct: 509 PTFEYLQAFLEDYFTSTE 526
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-17
Identities = 51/257 (19%), Positives = 110/257 (42%), Gaps = 26/257 (10%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VV GK + Q +AVK + +F +EA+++ +L + +L G C + +V
Sbjct: 23 VVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 159
EY+ N L +L ++ + L + + + + + S H DL A L D
Sbjct: 82 TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138
Query: 160 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 214
D ++S FG+ + D + S+ ++ PE + + +S +++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 215 LSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 268
S +P S + + + ++ + + ++ C P +
Sbjct: 199 FSLGKMPYDLYTNSEVVLKV-SQGHRLYRPHLASD---------TIYQIMYSCWHELPEK 248
Query: 269 RPNPKSLVTALSPLQKE 285
RP + L++++ PL+++
Sbjct: 249 RPTFQQLLSSIEPLREK 265
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-17
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 41 VVYKGKLENQR-RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF 158
+ E+M L +L + + L + ++ A+EY K H DL A L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLD 213
E+ +++ FGL + + A +T PE L + + +S +++FG LL +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 214 LLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 268
+ + P S +L+ + C E ++ L C Q+ P +
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSD 255
Query: 269 RPNPKSLVTALSPLQKETEV 288
RP+ + A + +E+ +
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 1e-17
Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 30/256 (11%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-LV 100
V G + +AVK A + FL EA + QLR++ L LLG E L +V
Sbjct: 209 VMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 159
EYM +L +L + L+ L + +A+EY H DL A +L
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323
Query: 160 EDGNPRLSTFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLL 215
ED ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380
Query: 216 S-GKH----IPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
S G+ IP + + ++ +M D C + + C + R
Sbjct: 381 SFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPP---------AVYDVMKNCWHLDAATR 430
Query: 270 PNPKSLVTALSPLQKE 285
P L L ++
Sbjct: 431 PTFLQLREQLEHIRTH 446
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 2e-17
Identities = 65/257 (25%), Positives = 104/257 (40%), Gaps = 30/257 (11%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-L 99
V G + +AVK A + FL EA + QLR++ L LLG E L +
Sbjct: 36 DVMLGDYRGNK-VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF 158
V EYM +L +L + L+ L + +A+EY H DL A +L
Sbjct: 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDL 214
ED ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 215 LS-GKH----IPPSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 268
S G+ IP + + ++ +M D C + + C +
Sbjct: 208 YSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAM 257
Query: 269 RPNPKSLVTALSPLQKE 285
RP+ L L ++
Sbjct: 258 RPSFLQLREQLEHIKTH 274
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 2e-17
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 28/259 (10%)
Query: 42 VYKGKLENQR-RIAVKRFNR-MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
V+ G+L +AVK + +FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILF 158
V E + L E ++ L++V A +EY SK H DL A L
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLV 246
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTNLAF------TPPEYLRTGRVTPESVIYSFGTLLL 212
E ++S FG+ + DG ++ T PE L GR + ES ++SFG LL
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 213 DLLSGKHIP-----PSHALDLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEP 266
+ S P + + ++ ++ + C + + RL +C YEP
Sbjct: 307 ETFSLGASPYPNLSNQQTREFV-EKGGRLPCPELCPD---------AVFRLMEQCWAYEP 356
Query: 267 RERPNPKSLVTALSPLQKE 285
+RP+ ++ L ++K
Sbjct: 357 GQRPSFSTIYQELQSIRKR 375
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-17
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDE 160
EYM N +L L + L + +A+ + + + H DL A IL +
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
+ +++ FGL + D + + A +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 216 SGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
+ IP + + +R +M+ D+C E EL +L C + P +R
Sbjct: 205 THGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDR 254
Query: 270 PNPKSLVTALSPLQKETE 287
P L + L TE
Sbjct: 255 PTFDYLRSVLEDFFTATE 272
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 5e-16
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 26/257 (10%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VV GK Q +A+K + +F+EEA+ + L + +L L G C + ++
Sbjct: 39 VVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 159
EYM N L +L H + L + + +A+EY SK H DL A L +
Sbjct: 98 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154
Query: 160 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+ G ++S FGL + D + S+ + ++PPE L + + +S I++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 215 LSGKHIP-P----SHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 268
S +P S + I + L++ E ++ + C + E
Sbjct: 215 YSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASE---------KVYTIMYSCWHEKADE 264
Query: 269 RPNPKSLVTALSPLQKE 285
RP K L++ + + E
Sbjct: 265 RPTFKILLSNILDVMDE 281
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 5e-16
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 26/256 (10%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
+V+ G N+ ++A+K A F+EEA + +L + +L L G C E LV
Sbjct: 23 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD 159
E+M + L+ +L + L + L + + + Y + H DL A L
Sbjct: 82 TEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--VIHRDLAARNCLVG 138
Query: 160 EDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTLLLDL 214
E+ ++S FG+ + D + S+ + PE R + +S ++SFG L+ ++
Sbjct: 139 ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 198
Query: 215 LSGKHIP-P----SHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRE 268
S IP S ++ I ++ + ++ + C + P +
Sbjct: 199 FSEGKIPYENRSNSEVVEDI-STGFRLYKPRLAST---------HVYQIMNHCWRERPED 248
Query: 269 RPNPKSLVTALSPLQK 284
RP L+ L+ + +
Sbjct: 249 RPAFSRLLRQLAEIAE 264
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 7e-16
Identities = 60/280 (21%), Positives = 103/280 (36%), Gaps = 37/280 (13%)
Query: 42 VYKGKL--------ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93
++KG ++ + +K ++ F E A + +L + L G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 152
GDE +LV E++ +L +L + + +L V LA A+ + L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 153 AYRILFDEDGNPR--------LSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV-TPESV 203
A IL + + + LS G+ + + PPE + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 204 IYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258
+SFGT L ++ SG P L DR Q EL L
Sbjct: 201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-----------HQLPAPKAAELANLI 249
Query: 259 SRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPH 298
+ C+ YEP RP+ ++++ L+ L VP H
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHHHH 289
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-15
Identities = 58/266 (21%), Positives = 103/266 (38%), Gaps = 32/266 (12%)
Query: 42 VYKGKL----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
VY G+ +N+ + A+K +R+ FL E + L + + L+G +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 97 RLL-VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 154
+ YM + L + + + L +A+ +EY + H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFI-RSPQRNPTVKDLISFGLQVARGMEYLAEQK--FVHRDLAAR 153
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--------TPPEYLRTGRVTPESVIYS 206
+ DE +++ FGL ++ D + YS T E L+T R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 207 FGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261
FG LL +LL+ G HI P + + C + L ++ +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---------SLYQVMQQC 264
Query: 262 LQYEPRERPNPKSLVTALSPLQKETE 287
+ +P RP + LV + +
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALL 290
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 3e-15
Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 32/266 (12%)
Query: 42 VYKGKL----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
VY G L + AVK NR+ + QFL E + + + +LLG C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 97 -RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 154
L+V YM + L + ETH + L +A+ ++Y SK H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKYLASKK--FVHRDLAAR 157
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--------TPPEYLRTGRVTPESVIYS 206
+ DE +++ FGL ++ D + YS + E L+T + T +S ++S
Sbjct: 158 NCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 217
Query: 207 FGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261
FG LL +L++ G + + + + C + L + +C
Sbjct: 218 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVMLKC 268
Query: 262 LQYEPRERPNPKSLVTALSPLQKETE 287
+ RP+ LV+ +S +
Sbjct: 269 WHPKAEMRPSFSELVSRISAIFSTFI 294
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 4e-15
Identities = 53/280 (18%), Positives = 104/280 (37%), Gaps = 45/280 (16%)
Query: 42 VYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V + +L + ++AVK + + +A D +FL EA + + + + L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 96 ER------LLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR 145
+ +++ +M + L + +R ++ +A +EY +S+
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN- 157
Query: 146 ALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY---STNLAF----TPPEYLRT 195
H DL A + ED ++ FGL SR Y E L
Sbjct: 158 -FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYRQGCASKLPVKWLALESLAD 213
Query: 196 GRVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250
T S +++FG + ++++ G+ I + + + N C+E
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME------- 266
Query: 251 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPS 290
E+ L +C +P++RP+ L L + V S
Sbjct: 267 --EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 6e-15
Identities = 55/271 (20%), Positives = 104/271 (38%), Gaps = 38/271 (14%)
Query: 42 VYKGKLEN------QRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
VY+G + + R+A+K N A + +FL EA + + + + LLG +G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 95 DERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLH----LAQALEYCTSKGRA 146
L++ E M L +P+ L ++ +A + Y +
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-- 158
Query: 147 LYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVT 199
H DL A + ED ++ FG+ ++ + Y PE L+ G T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 200 PESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254
S ++SFG +L ++ + + + L + + L D+C + L
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 269
Query: 255 VRLASRCLQYEPRERPNPKSLVTALSPLQKE 285
L C QY P+ RP+ +++++ +
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 1e-14
Identities = 54/263 (20%), Positives = 96/263 (36%), Gaps = 29/263 (11%)
Query: 42 VYKGKL----ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDE 96
V++G +A+K R+ FL+EA ++ Q + + L+G +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 155
++ E L L + A + L+ AL Y SK H D+ A
Sbjct: 465 VWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGTL 210
+L + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 211 LLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 632
Query: 266 PRERPNPKSLVTALSPLQKETEV 288
P RP L LS + +E ++
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 74.0 bits (182), Expect = 1e-14
Identities = 50/292 (17%), Positives = 99/292 (33%), Gaps = 54/292 (18%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL---GCCCEGDER- 97
V+ GK ++ +AVK F + + E + Q R N+L +G
Sbjct: 53 VWMGKWRGEK-VAVKVFF---TTEEASWFRE-TEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 98 ---LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALY 148
L+ +Y N +L +L ++ + L++ L + T A+
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 149 H-DLNAYRILFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVT 199
H DL + IL ++G ++ GL + ++ + T PE L +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223
Query: 200 PESV-------IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEG 244
+YSFG +L ++ P H L M C++
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283
Query: 245 Q--------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288
+D+ ++ +L + C + P R + L+ + + ++
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 2e-14
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQD 404
M++ K+KG+ A ++ DA++CY++ I + P +Y+ RS Y Q
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQK 56
Query: 405 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457
A D + + P W +AAAL + EA+ +EG E N
Sbjct: 57 AYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE-ANNPQL 108
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 72.5 bits (178), Expect = 4e-14
Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 38/264 (14%)
Query: 42 VYKGKL----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
VY G L + AVK NR+ + QFL E + + + +LLG C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 97 -RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 154
L+V YM + L + ETH + L +A+ +++ SK H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQVAKGMKFLASKK--FVHRDLAAR 221
Query: 155 RILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAF-----TPPEYLRTGRVTPESV 203
+ DE +++ FGL +RD ++ A E L+T + T +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 204 IYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258
++SFG LL +L++ G + + + + C + L +
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 329
Query: 259 SRCLQYEPRERPNPKSLVTALSPL 282
+C + RP+ LV+ +S +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRISAI 353
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 69.0 bits (169), Expect = 5e-14
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K +G+ A +K+ AI+ YTQ + +P + R+ Y S + A DA A +
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
+ P + A A M A+ A ++G E S A ++
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKR 119
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 5e-14
Identities = 57/274 (20%), Positives = 97/274 (35%), Gaps = 35/274 (12%)
Query: 42 VYKGKLEN-----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V + +AVK A P + +E + L + + GCC +
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 96 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 152
LV EY+P +L +L H + A L + + + Y ++ H DL
Sbjct: 107 AASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQH--YIHRDLA 161
Query: 153 AYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIY 205
A +L D D ++ FGL K +G Y + PE L+ + S ++
Sbjct: 162 ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
Query: 206 SFGTLLLDLLS--GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG----------TE 253
SFG L +LL+ P + +T L + G E
Sbjct: 222 SFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL--LERGERLPRPDKCPAE 279
Query: 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287
+ L C + E RP ++L+ L + ++ +
Sbjct: 280 VYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 5e-14
Identities = 53/264 (20%), Positives = 97/264 (36%), Gaps = 31/264 (11%)
Query: 41 VVYKGKLENQRR----IAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
V++G + +A+K + +FL+EA ++ Q + + L+G
Sbjct: 30 DVHQGIYMSPENPALAVAIKTCKNCTSD-SVREKFLQEALTMRQFDHPHIVKLIG-VITE 87
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 153
+ ++ E L L + + A + L+ AL Y SK H D+ A
Sbjct: 88 NPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR--FVHRDIAA 144
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFG 208
+L + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 145 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG 204
Query: 209 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263
+ ++L P + + I + + +C L L ++C
Sbjct: 205 VCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWA 255
Query: 264 YEPRERPNPKSLVTALSPLQKETE 287
Y+P RP L LS + +E +
Sbjct: 256 YDPSRRPRFTELKAQLSTILEEEK 279
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 7e-14
Identities = 47/291 (16%), Positives = 96/291 (32%), Gaps = 52/291 (17%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEAR--SVGQLRNNRLTNLLGCCCEGD---- 95
V++GK +AVK F+ + R + EA LR+ + + + +
Sbjct: 58 VWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALYH 149
+ LV++Y + +L +L + + +++ L A L + T A+ H
Sbjct: 114 QLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170
Query: 150 -DLNAYRILFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVTP 200
DL + IL ++G ++ GL + + T PE L +
Sbjct: 171 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINM 229
Query: 201 ESV-------IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEGQ 245
+ IY+ G + ++ I P + L +M C +
Sbjct: 230 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 289
Query: 246 --------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288
+ + + ++ C R + LS L ++ +
Sbjct: 290 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 7e-14
Identities = 63/315 (20%), Positives = 116/315 (36%), Gaps = 44/315 (13%)
Query: 42 VYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V G+L + + +A+K + R FL EA +GQ + + L G +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALY-H-DL 151
++V EYM N +L L H ++ + + ++ +A ++Y + G Y H DL
Sbjct: 120 PVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 152 NAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVI 204
A IL + + ++S FGL + D + T PE + + T S +
Sbjct: 174 AARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 205 YSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259
+S+G +L +++S P + + + C L +L
Sbjct: 234 WSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA---------ALYQLML 284
Query: 260 RCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTA 319
C Q + RP + +V+ L L + P + + +A S L
Sbjct: 285 DCWQKDRNNRPKFEQIVSILDKLIRN---PGSLKIITSAAARPSNLLLDQSNVDITTFRT 341
Query: 320 IHEILEKIS---YKD 331
+ L + K+
Sbjct: 342 TGDWLNGVWTAHCKE 356
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 1e-13
Identities = 58/269 (21%), Positives = 102/269 (37%), Gaps = 38/269 (14%)
Query: 41 VVYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
V G+L + +A+K + R FL EA +GQ + + L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTE-RQRRDFLSEASIMGQFDHPNIIRLEGVVTRG 122
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALY-H-D 150
++V EYM N +L L TH ++ + + ++ + + Y + G Y H D
Sbjct: 123 RLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRD 176
Query: 151 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESV 203
L A +L D + ++S FGL + D +T T PE + + S
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASD 236
Query: 204 IYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258
++SFG ++ ++L+ P + + + C L +L
Sbjct: 237 VWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH---------ALHQLM 287
Query: 259 SRCLQYEPRERPNPKSLVTALSPLQKETE 287
C + +RP +V+ L L + E
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-13
Identities = 59/290 (20%), Positives = 112/290 (38%), Gaps = 38/290 (13%)
Query: 42 VYKGKL-----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
VYKG L + + +A+K + FL EA +GQ ++ + L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 118
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH-DL 151
+++ EYM N L K L ++++ + ++ +A ++Y + H DL
Sbjct: 119 KPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYLANMN--YVHRDL 173
Query: 152 NAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNLAF----TPPEYLRTGRVTPESVI 204
A IL + + ++S FGL +++ + ++ T PE + + T S +
Sbjct: 174 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDV 233
Query: 205 YSFGTLLLDLLSGKHIP-P----SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259
+SFG ++ ++++ P + I D C + +L
Sbjct: 234 WSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS---------AIYQLMM 284
Query: 260 RCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLG 309
+C Q E RP +V+ L L + + L S+ S G
Sbjct: 285 QCWQQERARRPKFADIVSILDKLIRAPD-SLKTLADFDPRVSIRLPSTSG 333
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-13
Identities = 50/276 (18%), Positives = 98/276 (35%), Gaps = 44/276 (15%)
Query: 42 VYKGKL----ENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V +G L ++AVK + + + + +FL EA + + + LLG C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 96 -----ERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 146
+ +++ +M L + L+ ++ +A +EY +++
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-- 167
Query: 147 LYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD--GKSY---STNLAF----TPPEYLRTG 196
H DL A + +D ++ FGL S+ Y E L
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224
Query: 197 RVTPESVIYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251
T +S +++FG + ++ + G + D + + + CL+
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD-------- 276
Query: 252 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287
EL + C + +P +RP L L L +
Sbjct: 277 -ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 4e-13
Identities = 53/279 (18%), Positives = 97/279 (34%), Gaps = 41/279 (14%)
Query: 41 VVYKGKLENQR-----RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V + + + +AVK+ R F E + L+++ + G C
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115
Query: 96 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 152
R L+ EY+P +L +L + + L+ + + +EY +K H DL
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172
Query: 153 AYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIY 205
IL + + ++ FGL K K Y PE L + + S ++
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 206 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV----RLA--- 258
SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPRPD 286
Query: 259 ----------SRCLQYEPRERPNPKSLVTALSPLQKETE 287
+ C +RP+ + L + ++ +
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 4e-13
Identities = 58/276 (21%), Positives = 103/276 (37%), Gaps = 41/276 (14%)
Query: 42 VYKGKLEN------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V+ + N + +AVK + F EA + L++ + G C +GD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 96 ERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--SKGRALY- 148
++V EYM + + L H + + L L+Q L + + G Y
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMV-YL 149
Query: 149 ------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS--TNLAF----TPPEYLRT 195
H DL L + ++ FG+ ++ Y + PPE +
Sbjct: 150 ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY 209
Query: 196 GRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250
+ T ES ++SFG +L ++ + GK + + ++ I + C +
Sbjct: 210 RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK------- 262
Query: 251 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286
E+ + C Q EP++R N K + L L K T
Sbjct: 263 --EVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 5e-13
Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 35/267 (13%)
Query: 41 VVYKGKLENQRR-----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
VYKG + +A+K P ++ L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 153
L+ + MP L ++ + L + +A+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVTPESVIYSF 207
+L + +++ FGL K + + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 208 GTLLLDLLS-GKH----IPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASR 260
G + +L++ G IP S ++ R Q C ++ + +
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTI---------DVYMIMRK 254
Query: 261 CLQYEPRERPNPKSLVTALSPLQKETE 287
C + RP + L+ S + ++ +
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMARDPQ 281
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 70.0 bits (171), Expect = 6e-13
Identities = 52/264 (19%), Positives = 96/264 (36%), Gaps = 30/264 (11%)
Query: 41 VVYKGKLENQRR---IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
V +G +++ +A+K + D + + EA+ + QL N + L+G C+ +
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 155
+LV E L K L + + ++ ++ ++Y K H +L A
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFG 208
+L ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 209 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263
+ + LS P + I C EL L S C
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 577
Query: 264 YEPRERPNPKSLVTALSPLQKETE 287
Y+ +RP+ ++ +
Sbjct: 578 YKWEDRPDFLTVEQRMRACYYSLA 601
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 7e-13
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K KG+ F++ D A++ YT+ I +Y+ R+ CY Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
+ P + +AAAL AM +A ++ L+ A
Sbjct: 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD-SSCKEAADG 123
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 9e-13
Identities = 52/285 (18%), Positives = 99/285 (34%), Gaps = 52/285 (18%)
Query: 42 VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEA--RSVGQLRNNRLTNLLGCCCEGD---- 95
V++G + + +AVK F+ D + + E + LR+ + +
Sbjct: 24 VWRGSWQGEN-VAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY------CTSKGRALYH 149
+ L+ Y +L +L + + LR+VL +A L + T A+ H
Sbjct: 80 QLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAH 136
Query: 150 -DLNAYRILFDEDGNPRLSTFGL----MKNSRDGKSYSTNLAFTP----PEYLRTGRVTP 200
DL + IL ++G ++ GL +++ + T PE L +
Sbjct: 137 RDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQV 195
Query: 201 ESV-------IYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNLQMLTDSCLEGQ 245
+ I++FG +L ++ PP + + M C++ Q
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 255
Query: 246 --------FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282
F+D T L +L C P R + L+ +
Sbjct: 256 RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 9e-13
Identities = 55/264 (20%), Positives = 97/264 (36%), Gaps = 32/264 (12%)
Query: 41 VVYKGKLENQRR---IAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V KG + ++ +AVK + + L EA + QL N + ++G CE +
Sbjct: 32 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAE 90
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 154
+LV E L K+L K + +V ++ ++Y H DL A
Sbjct: 91 SWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLEESN--FVHRDLAAR 146
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIYSF 207
+L ++S FGL K R ++Y T+ + PE + + + +S ++SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 208 GTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262
G L+ + S P S ++ C E+ L + C
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCW 257
Query: 263 QYEPRERPNPKSLVTALSPLQKET 286
Y+ RP ++ L +
Sbjct: 258 TYDVENRPGFAAVELRLRNYYYDV 281
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 68.1 bits (167), Expect = 9e-13
Identities = 48/291 (16%), Positives = 102/291 (35%), Gaps = 39/291 (13%)
Query: 41 VVYKGKLENQRR-----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
V+KG + + +K + + + ++G L + + LLG C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 153
LV +Y+P +L H+ + + L + +A+ + Y G + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 207
+L +++ FG+ + + E + G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 208 GTLLLDLLS-GKH----IPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASR 260
G + +L++ G + + DL+ R Q C ++ + +
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP--QICTI---------DVYMVMVK 252
Query: 261 CLQYEPRERPNPKSLVTALSPLQKE----TEVPSHVLMGIPHSASVSPLSP 307
C + RP K L + + ++ + GI L+
Sbjct: 253 CWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTN 303
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 1e-12
Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K KG+ F++ D A+ Y + + + +Y+ R+ C Q AL+D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIR 75
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457
+ + +AA L AM ++AQ A ++ ++ N A
Sbjct: 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD-PSNEEA 117
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 67.3 bits (164), Expect = 1e-12
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
+ A + M +EA L+ +L ++ G
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 112
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 55/307 (17%), Positives = 112/307 (36%), Gaps = 40/307 (13%)
Query: 41 VVYKGKLENQRR-----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
VYKG + +A+K P ++ L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 153
L+ + MP L ++ + L + +A+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSF 207
+L + +++ FGL K + + + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 208 GTLLLDLLS-GKH----IPPSHALDLIRD--RNLQMLTDSCLEGQFTDDDGTELVRLASR 260
G + +L++ G IP S ++ R Q C ++ + +
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP--PICTI---------DVYMIMVK 254
Query: 261 CLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSRRDLTAI 320
C + RP + L+ S + ++ + + I + SP ++ R L
Sbjct: 255 CWMIDADSRPKFRELIIEFSKMARDPQ----RYLVIQGDERMHLPSP-TDSNFYRALMDE 309
Query: 321 HEILEKI 327
++ + +
Sbjct: 310 EDMDDVV 316
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-12
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 7/109 (6%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTV---YARRSLCYLMSDMPQDALNDAMQ 411
K++G+ F + +A CY + I +P V Y R+LCYL P+ AL D +
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRR 68
Query: 412 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
A + A + M +EA L+ +L ++ G
Sbjct: 69 ALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDD 117
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 2e-12
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 346 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDA 405
++ K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ A
Sbjct: 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYA 66
Query: 406 LNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 450
L DA +A + + Y +AA+ A+G A + ++
Sbjct: 67 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 56/263 (21%), Positives = 100/263 (38%), Gaps = 29/263 (11%)
Query: 41 VVYKGKLENQR----RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGD 95
VY+G N + +AVK + D ++ F+ EA + L + + L+G E +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 154
++ E P L +L + + + L + +A+ Y S H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-----FTPPEYLRTGRVTPESVIYSFGT 209
IL +L FGL + D Y ++ + PE + R T S ++ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 210 LLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 264
+ ++LS P + ++ + D C L L +RC Y
Sbjct: 203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPP---------VLYTLMTRCWDY 253
Query: 265 EPRERPNPKSLVTALSPLQKETE 287
+P +RP LV +LS + + +
Sbjct: 254 DPSDRPRFTELVCSLSDVYQMEK 276
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 3e-12
Identities = 53/281 (18%), Positives = 96/281 (34%), Gaps = 45/281 (16%)
Query: 41 VVYKGKLE-----NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V + + +AVK+ R F E + L+++ + G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84
Query: 96 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH-D 150
R L+ EY+P +L +L + H + L+ + + +EY +K H D
Sbjct: 85 RRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGTKR--YIHRD 139
Query: 151 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESV 203
L IL + + ++ FGL K K + PE L + + S
Sbjct: 140 LATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASD 199
Query: 204 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV----RLA- 258
++SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 200 VWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPR 253
Query: 259 ------------SRCLQYEPRERPNPKSLVTALSPLQKETE 287
+ C +RP+ + L + ++
Sbjct: 254 PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 3e-12
Identities = 52/274 (18%), Positives = 97/274 (35%), Gaps = 38/274 (13%)
Query: 42 VYKGKLENQR------RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
VY+G++ ++AVK + D FL EA + + + + +G +
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 95 DERLLVAEYMPNETLAKHL-----FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 149
R ++ E M L L + + L V +A +Y H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 163
Query: 150 -DLNAYRILFDEDGNPRL---STFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVT 199
D+ A L G R+ FG+ ++ Y + PPE G T
Sbjct: 164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 223
Query: 200 PESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254
++ +SFG LL ++ S G L+ + +C +
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG---------PV 274
Query: 255 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288
R+ ++C Q++P +RPN ++ + ++ +V
Sbjct: 275 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 67.0 bits (163), Expect = 3e-12
Identities = 42/280 (15%), Positives = 70/280 (25%), Gaps = 49/280 (17%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLR---NNRLTNLLGCCCE 93
VV+ + +E A+K F A + E + +L +
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 94 GD-----------------------ERLLVAEYMP--NETLAKHLFHWET--HPMKWAMR 126
D LL+ E L L
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 127 LRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGL-MKNSRDGKSY 181
+ L + SKG L H N + DG L K G +
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 182 STNLAFTPPEYL--RTGRVTPESVIYSFGTLLLDLLSGK---HIPPSHALDLIRDRNLQM 236
S + + P E+L T T + G + + + + +L++
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV 311
Query: 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
L + L R L ++ R R P +
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 4e-12
Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 38/274 (13%)
Query: 42 VYKGKLENQR------RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
VY+G++ ++AVK + D FL EA + + + + +G +
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 95 DERLLVAEYMPNETLAKHL---FHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH 149
R ++ E M L L + P AM L V +A +Y H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 204
Query: 150 -DLNAYRILFDEDGNPRL---STFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVT 199
D+ A L G R+ FG+ ++ Y + PPE G T
Sbjct: 205 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFT 264
Query: 200 PESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254
++ +SFG LL ++ S G L+ + +C +
Sbjct: 265 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG---------PV 315
Query: 255 VRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288
R+ ++C Q++P +RPN ++ + ++ +V
Sbjct: 316 YRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 5e-12
Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 42/283 (14%)
Query: 42 VYKGKLENQR------RIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V+ + N +AVK + + F EA + L++ + G C EG
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 96 ERLLVAEYMPNETLAKHL-------------FHWETHPMKWAMRLRVVLHLAQALEYCTS 142
L+V EYM + L + L P+ L V +A + Y
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176
Query: 143 KGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRT 195
H DL L + ++ FG+ ++ Y PPE +
Sbjct: 177 LH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY 234
Query: 196 GRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250
+ T ES ++SFG +L ++ + GK + + A+D I +C
Sbjct: 235 RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP------- 287
Query: 251 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVL 293
E+ + C Q EP++R + K + L L + V VL
Sbjct: 288 --EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 328
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 5e-12
Identities = 51/264 (19%), Positives = 95/264 (35%), Gaps = 30/264 (11%)
Query: 41 VVYKGKLENQRR---IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
V +G +++ +A+K + D + + EA+ + QL N + L+G C+ +
Sbjct: 25 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 83
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 155
+LV E L K L + + ++ ++ ++Y K H DL A
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIYSFG 208
+L ++S FGL K SY + + PE + + + S ++S+G
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 200
Query: 209 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263
+ + LS P + I C EL L S C
Sbjct: 201 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 251
Query: 264 YEPRERPNPKSLVTALSPLQKETE 287
Y+ +RP+ ++ +
Sbjct: 252 YKWEDRPDFLTVEQRMRACYYSLA 275
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 66.2 bits (161), Expect = 5e-12
Identities = 48/337 (14%), Positives = 82/337 (24%), Gaps = 80/337 (23%)
Query: 41 VVYKGK-LENQRRIAVK---RFNRMAWPDPRQFLEEARSVGQLRNNR------------- 83
+ E V R +Q EE + LR +
Sbjct: 93 AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 152
Query: 84 ---LTNLLGCCCEGDER-------------LLVAEYMPNETLAKHLFHW--ETHPMKWAM 125
L R L +T + L +
Sbjct: 153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 212
Query: 126 RLRVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
RL++ L + + L G L H L + I+ D+ G L+ F +
Sbjct: 213 RLQLTLQVIRLLASLHHYG--LVHTYLRPVD---IVLDQRGGVFLTGFEHLVRDGASAVS 267
Query: 182 STNLAFTPPEYL----------RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD 231
F PPE +T ++ G + + P+ +
Sbjct: 268 PIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD--LPNTDDAALGG 325
Query: 232 RNLQMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERPNP------------KSLVT 277
E F + L L+Y +R P ++ ++
Sbjct: 326 ----------SEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 375
Query: 278 ALSPLQKETEVPSHVLMGIPHSASVSPLSPLGEACSR 314
A PL + P+ P S + EA +
Sbjct: 376 AALPLYQTDGEPTREGGAPPSGTSQPDEAGAAEAVTA 412
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 6e-12
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFI--DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA 412
+K+G+ F+ D A+ YTQ + DA ++ R+ C+L + A +A +A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 413 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457
A Y ++ AL +G ++A + L+ +LE KN
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE-PKNKVF 135
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 6e-12
Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 34/261 (13%)
Query: 41 VVYKGKL----ENQRRIAVK--RFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCE 93
VV +G+ +AVK + + ++ P+ F+ E ++ L + L L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 152
+V E P +L L R + +A+ + Y SK H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 153 AYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTN------LAFTPPEYLRTGRVTPESVIY 205
A +L ++ FGLM+ ++ Y A+ PE L+T + S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 206 SFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLAS 259
FG L ++ + P S L I ++ + C + ++ +
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQ---------DIYNVMV 259
Query: 260 RCLQYEPRERPNPKSLVTALS 280
+C ++P +RP +L L
Sbjct: 260 QCWAHKPEDRPTFVALRDFLL 280
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 6e-12
Identities = 45/249 (18%), Positives = 87/249 (34%), Gaps = 25/249 (10%)
Query: 42 VYKGK-LENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCC---CEGD 95
VYKG E +A + ++F EEA + L++ + +G
Sbjct: 42 VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101
Query: 96 ERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 153
+ + LV E M + TL +L MK + + + L++ ++ + H DL
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 154 YRILFD-EDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTL 210
I G+ ++ GL R + + F PE +Y+FG
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMC 218
Query: 211 LLDLLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 266
+L++ + ++ + + +T F E+ + C++
Sbjct: 219 MLEMATSEYPYSECQNAAQIYRR-------VTSGVKPASFDKVAIPEVKEIIEGCIRQNK 271
Query: 267 RERPNPKSL 275
ER + K L
Sbjct: 272 DERYSIKDL 280
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 7e-12
Identities = 60/282 (21%), Positives = 103/282 (36%), Gaps = 47/282 (16%)
Query: 42 VYKGKL--------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRN-NRLTNLLGCC 91
V + ++AVK A D + E + + + NLLG C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 92 CEGDERLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQAL 137
+ ++ EY L ++L + +H + + + ++ A+ +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 138 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 190
EY SK H DL A +L ED +++ FGL ++ Y +TN P
Sbjct: 205 EYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 191 EYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQ 245
E L T +S ++SFG LL ++ + G +P L+++ + +C
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN-- 320
Query: 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287
EL + C P +RP K LV L + T
Sbjct: 321 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 1e-11
Identities = 51/275 (18%), Positives = 97/275 (35%), Gaps = 45/275 (16%)
Query: 42 VYKGKLE-----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V + + ++AVK + +E + L + + G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 96 ER--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 152
L+ E++P+ +L ++L + + +L+ + + + ++Y S+ H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153
Query: 153 AYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRVTPESVIY 205
A +L + + ++ FGL K K Y + PE L + S ++
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 206 SFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV----RLAS- 259
SFG L +LL+ AL L GQ T + RL
Sbjct: 214 SFGVTLHELLTYCDSDSSPMALFLKMIGPTH--------GQMTVTRLVNTLKEGKRLPCP 265
Query: 260 ------------RCLQYEPRERPNPKSLVTALSPL 282
+C +++P R + ++L+ L
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 1e-11
Identities = 61/278 (21%), Positives = 108/278 (38%), Gaps = 45/278 (16%)
Query: 42 VYKGKL---ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCEGDE 96
V K ++ + A+KR A D R F E + +L ++ + NLLG C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 97 RLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQALEYCTS 142
L EY P+ L L + + + +LH A+ ++Y +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 143 KGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRT 195
K H DL A IL E+ +++ FGL SR + Y T E L
Sbjct: 161 KQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215
Query: 196 GRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250
T S ++S+G LL +++S G + + + + +C +
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD------- 268
Query: 251 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288
E+ L +C + +P ERP+ ++ +L+ + +E +
Sbjct: 269 --EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 2e-11
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 12/108 (11%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 411
K +G+ + ++ + A+ Y + I+ ++P + R+ Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 412 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE-----AKKN 454
A I P + A ALS++ EA K+ L+ K N
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSN 119
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 64.3 bits (156), Expect = 2e-11
Identities = 33/194 (17%), Positives = 58/194 (29%), Gaps = 34/194 (17%)
Query: 98 LLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL--- 151
L +T + L + RL++ L + + L G L H L
Sbjct: 178 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG--LVHTYLRPV 235
Query: 152 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYL-----------RTGRVTP 200
+ I+ D+ G L+ F + S + F PPE R +T
Sbjct: 236 D---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTF 292
Query: 201 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR-LAS 259
++ G ++ + P I ++ + + VR L
Sbjct: 293 SFDAWALGLVIYWIWCAD--LP------ITKDAALGGSEWIFRS---CKNIPQPVRALLE 341
Query: 260 RCLQYEPRERPNPK 273
L+Y +R P
Sbjct: 342 GFLRYPKEDRLLPL 355
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 63/300 (21%), Positives = 103/300 (34%), Gaps = 49/300 (16%)
Query: 42 VYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
V + +AVK+ R F E + + L ++ + G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 97 R--LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--SKG------RA 146
+ LV EY+P+ L L R R L ++ L Y + KG R
Sbjct: 99 QSLRLVMEYLPSGCLRDFL-----------QRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 147 LYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY---STNLAF----TPPEYLRTGRV 198
H DL A IL + + + +++ FGL K K Y PE L
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 199 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG------- 251
+ +S ++SFG +L +L + S + + +R + + ++G
Sbjct: 208 SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPP 267
Query: 252 ---TELVRLASRCLQYEPRERPNPKSLVTAL-----SPLQKETEVPSHVLMGIPHSASVS 303
E+ L C P++RP+ +L L ET + G HS S S
Sbjct: 268 ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAFTAHPEGKHHSLSFS 327
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 63.0 bits (154), Expect = 3e-11
Identities = 54/270 (20%), Positives = 95/270 (35%), Gaps = 42/270 (15%)
Query: 42 VYKGKLENQR------RIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 94
VYKG L +A+K A R+ F EA +L++ + LLG +
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 95 DERLLVAEYMPN----ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--SKGRALY 148
++ Y + E L H + ++ L + + G Y
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME-Y 143
Query: 149 -------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA------FTPPEYLR 194
H DL +L + N ++S GL + Y + PE +
Sbjct: 144 LSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 203
Query: 195 TGRVTPESVIYSFGTLLLDLLSGKHIP-PSHA----LDLIRDRNLQMLTDSCLEGQFTDD 249
G+ + +S I+S+G +L ++ S P ++ +++IR+R + D C
Sbjct: 204 YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPA------ 257
Query: 250 DGTELVRLASRCLQYEPRERPNPKSLVTAL 279
+ L C P RP K + + L
Sbjct: 258 ---WVYALMIECWNEFPSRRPRFKDIHSRL 284
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 4e-11
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
+ +G F + D +A++ YT+ I Y+ R+ +A+ D +A
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIE 66
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAGQK 460
P + A +A A A+ A L T +A+ N+ + +
Sbjct: 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAR 112
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 9e-11
Identities = 59/292 (20%), Positives = 108/292 (36%), Gaps = 47/292 (16%)
Query: 42 VYKGKL--------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNR-LTNLLGCC 91
V + + +AVK A D + E + + ++ + NLLG C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 92 CEGDERLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQAL 137
+ ++ EY L ++L + + M + ++ A+ +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 138 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 190
EY S+ H DL A +L E+ +++ FGL ++ + Y +TN P
Sbjct: 171 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 191 EYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQ 245
E L T +S ++SFG L+ ++ + G IP L+++ + +C
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 286
Query: 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLMGIP 297
EL + C P +RP K LV L + T ++ + P
Sbjct: 287 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 2e-10
Identities = 39/251 (15%), Positives = 77/251 (30%), Gaps = 43/251 (17%)
Query: 30 IVSEHGEKAPNVVYKG---KLENQRRIAVK--RFNRMAWPDPRQ-FLEEARSVGQLRNNR 83
++ HG P ++ L+ R++A+ + D Q L + ++
Sbjct: 35 LLIFHGGVPPLQFWQALDTALD--RQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPG 92
Query: 84 LTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK 143
+ +L L+VAE++ +L + +T P +R + LA A +
Sbjct: 93 VARVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRAMQSLAAAADAAHRA 148
Query: 144 GRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 202
G + + R+ DG+ L+ M P+
Sbjct: 149 G--VALSIDHPSRVRVSIDGDVVLAYPATM-----------------------PDANPQD 183
Query: 203 VIYSFGTLLLDLLSGKHIPP---SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259
I G L LL + P + + D ++ +A+
Sbjct: 184 DIRGIGASLYALLVNR--WPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAA 241
Query: 260 RCLQYEPRERP 270
R +Q + R
Sbjct: 242 RSVQGDGGIRS 252
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 2e-10
Identities = 45/244 (18%), Positives = 92/244 (37%), Gaps = 19/244 (7%)
Query: 42 VYKGK-LENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
K E+ R+ +K +RM+ + + E + +++ + E
Sbjct: 40 AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158
+V +Y L K + + + L + + AL++ + + L+ D+ + I
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL 158
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDL 214
+DG +L FG+ + + TP PE +S I++ G +L +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 215 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT---ELVRLASRCLQYEPRERPN 271
+ K A +++ L + G F +L L S+ + PR+RP+
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270
Query: 272 PKSL 275
S+
Sbjct: 271 VNSI 274
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 4e-10
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K + + F+ KD ++AI+ Y+Q I+ + Y RSL YL ++ AL DA +A
Sbjct: 10 KTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIE 68
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALK 444
+ + Y +AA+ A+G A +
Sbjct: 69 LDKKYIKGYYRRAASNMALGKFRAALRDYE 98
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 5e-10
Identities = 58/282 (20%), Positives = 104/282 (36%), Gaps = 47/282 (16%)
Query: 42 VYKGKL--------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNR-LTNLLGCC 91
V + + +AVK A D + E + + ++ + NLLG C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 92 CEGDERLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLHL----AQAL 137
+ ++ EY L ++L + + M + ++ A+ +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 138 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 190
EY S+ H DL A +L E+ +++ FGL ++ + Y +TN P
Sbjct: 217 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274
Query: 191 EYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSCLEGQ 245
E L T +S ++SFG L+ ++ + G IP L+++ + +C
Sbjct: 275 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 332
Query: 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287
EL + C P +RP K LV L + T
Sbjct: 333 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 367
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 60.2 bits (146), Expect = 5e-10
Identities = 51/260 (19%), Positives = 85/260 (32%), Gaps = 53/260 (20%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARS-VGQLRN-NRLTNL--LGCCCEGDE 96
+VY+G +N R +AVKR + A V LR + N+ C + +
Sbjct: 40 IVYRGMFDN-RDVAVKRILP-------ECFSFADREVQLLRESDEHPNVIRYFCTEKDRQ 91
Query: 97 RL-LVAEYMPNE----TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-D 150
+ E K H P + ++ L + S + H D
Sbjct: 92 FQYIAIELCAATLQEYVEQKDFAHLGLEP------ITLLQQTTSGLAHLHSLN--IVHRD 143
Query: 151 LNAYRILF---DEDGNPR--LSTFGLMKNSRDGKSYSTNLAF---TP----PEYLR---T 195
L + IL + G + +S FGL K G+ + + T PE L
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCK 203
Query: 196 GRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDD 250
T I+S G + ++S P A L+ +L L +
Sbjct: 204 ENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE-------KHE 256
Query: 251 GTELVRLASRCLQYEPRERP 270
L + + +P++RP
Sbjct: 257 DVIARELIEKMIAMDPQKRP 276
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 7e-10
Identities = 63/279 (22%), Positives = 105/279 (37%), Gaps = 52/279 (18%)
Query: 42 VYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
V K +AVK A P + R L E + Q+ + + L G C +
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 95 DERLLVAEYMPN------------------ETLAKHLFHWETHPMKWAMRLRVVLH---- 132
LL+ EY + HP + A+ + ++
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 133 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF-- 187
++Q ++Y L H DL A IL E ++S FGL ++ + SY +
Sbjct: 159 ISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPV 216
Query: 188 --TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDS 240
E L T +S ++SFG LL ++++ G + IPP +L++ + D+
Sbjct: 217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDN 276
Query: 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
C E E+ RL +C + EP +RP + L
Sbjct: 277 CSE---------EMYRLMLQCWKQEPDKRPVFADISKDL 306
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 7e-10
Identities = 52/245 (21%), Positives = 84/245 (34%), Gaps = 26/245 (10%)
Query: 42 VYKG-KLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDER 97
V+K E+ R AVKR D + L E S ++ + L EG
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132
Query: 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 157
L E +L +H W + A + AL + S+G ++ D+ I
Sbjct: 133 YLQTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIF 189
Query: 158 FDEDGNPRLSTFGLMKN-SRDGKSYSTNLAF--TP----PEYLRTGRVTPESVIYSFGTL 210
G +L FGL+ G P PE L+ + ++S G
Sbjct: 190 LGPRGRCKLGDFGLLVELGTAGAGEV----QEGDPRYMAPELLQGSY-GTAADVFSLGLT 244
Query: 211 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 270
+L++ P Q L L +FT +EL + L+ +P+ R
Sbjct: 245 ILEVACNME-LPHGG------EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRA 297
Query: 271 NPKSL 275
++L
Sbjct: 298 TAEAL 302
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 7e-10
Identities = 16/99 (16%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 407
M + K++G+ F+Q ++A+ CY Q I A +P Y+ +++ + A+
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 408 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEG 446
Q + +++ + + A +++
Sbjct: 60 MCQQGLRYTSTAEHV-AIRSKLQYRLELAQGAVGSVQIP 97
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 8e-10
Identities = 64/291 (21%), Positives = 103/291 (35%), Gaps = 50/291 (17%)
Query: 42 VYKGKLEN------QRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEG 94
V++ + +AVK A D + F EA + + N + LLG C G
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122
Query: 95 DERLLVAEYMPN------------ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT- 141
L+ EYM T+ + + + L A+ L
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 142 -SKGRALY-------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF--- 187
+ G A Y H DL L E+ +++ FGL +N Y N A
Sbjct: 183 VAAGMA-YLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR 241
Query: 188 -TPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNLQMLTDSC 241
PPE + R T ES ++++G +L ++ S G + + +RD N+ ++C
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC 301
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHV 292
EL L C P +RP+ S+ L + + E V
Sbjct: 302 PL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTVGV 343
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 3e-09
Identities = 55/250 (22%), Positives = 100/250 (40%), Gaps = 20/250 (8%)
Query: 35 GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93
G+ A VY + + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
GDE +V EY+ +L + M V QALE+ S ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKS 144
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL DG+ +L+ FG +S + + TP PE + P+ I+S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 210 LLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265
+ ++++ G+ + P AL LI L + + + +RCL+ +
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKLSA----IFRDFLNRCLEMD 257
Query: 266 PRERPNPKSL 275
+R + K L
Sbjct: 258 VEKRGSAKEL 267
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 3e-09
Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 48/283 (16%)
Query: 42 VYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRN-NRLTNLLGCCCE 93
V + + +AVK A + + E + + L N + NLLG C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 94 GDERLLVAEYMPN------------ETLAKHLFHWETHPMKWAMRLRVVLHL----AQAL 137
G L++ EY + + A+ L +L A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 138 EYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPP 190
+ SK H DL A IL ++ FGL ++ ++ +Y N P
Sbjct: 159 AFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 191 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNLQMLTDSCLEG 244
E + T ES ++S+G L +L S P P + +I++ + +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPA- 275
Query: 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287
E+ + C +P +RP K +V + E+
Sbjct: 276 --------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 4e-09
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 16/192 (8%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
VY + ++A+K ++F E + QL + + +++ E D
Sbjct: 26 TVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC 85
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 155
LV EY+ TL++++ P+ + + +++ + H D+
Sbjct: 86 YYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQN 141
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF-TP----PEYLRTGRVTPESVIYSFGTL 210
IL D + ++ FG+ K + TN T PE + + IYS G +
Sbjct: 142 ILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 211 LLDLLSGKHIPP 222
L ++L G+ PP
Sbjct: 202 LYEMLVGE--PP 211
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-09
Identities = 54/283 (19%), Positives = 92/283 (32%), Gaps = 54/283 (19%)
Query: 42 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEAR---SVGQLRNNRLTNLLGCC 91
V + + ++AVK A + + E + +GQ N + NLLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN--IVNLLGAC 119
Query: 92 CEGDERLLVAEYMPN------------ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY 139
G L++ EY F L +AQ + +
Sbjct: 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAF 179
Query: 140 CTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRD---GKSY--STNLAF----TP 189
SK H D+ A +L ++ FGL +RD +Y N
Sbjct: 180 LASKN--CIHRDVAARNVLLTNGHVAKIGDFGL---ARDIMNDSNYIVKGNARLPVKWMA 234
Query: 190 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNLQMLTDSCLE 243
PE + T +S ++S+G LL ++ S P ++ L++D +
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPK 294
Query: 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286
+ + C EP RP + + + L +E
Sbjct: 295 ---------NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 5e-09
Identities = 53/290 (18%), Positives = 101/290 (34%), Gaps = 51/290 (17%)
Query: 41 VVYKGK-LENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97
VV++ K + A+K R + + E +++ +L + + E +
Sbjct: 20 VVFEAKNKVDDCNYAIKRIRLPNREL-AREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 98 L------------LVAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKG 144
+ + E L + T + ++ L + L +A+A+E+ SKG
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG 138
Query: 145 RALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV-TP-- 200
L H DL I F D ++ FGL+ + T L P TG+V T
Sbjct: 139 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY 196
Query: 201 -------------ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247
+ I+S G +L +LL P S ++ +R +F
Sbjct: 197 MSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVR------TLTDVRNLKFP 246
Query: 248 DDDGT---ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVPSHVLM 294
+ L P ERP +++ + + ++ + P ++
Sbjct: 247 PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE--NAVFEDLDFPGKTVL 294
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 6e-09
Identities = 50/250 (20%), Positives = 95/250 (38%), Gaps = 20/250 (8%)
Query: 35 GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93
GE + +V + + R++AVK + E + ++ + +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
G+E ++ E++ L + + V + QAL Y ++G ++ D+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGV-IHRDIKS 169
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL DG +LS FG +L TP PE + E I+S G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 210 LLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265
++++++ G+ P A+ +RD L +S + + L R L +
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKVSP----VLRDFLERMLVRD 282
Query: 266 PRERPNPKSL 275
P+ER + L
Sbjct: 283 PQERATAQEL 292
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 7e-09
Identities = 52/272 (19%), Positives = 102/272 (37%), Gaps = 31/272 (11%)
Query: 42 VYKGK-LENQRRIAVKR---FNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97
VY+ L + +A+K+ F+ M ++E + QL + + E +E
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 98 LLVAEYMPNETLAKHL--FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAY 154
+V E L++ + F + + + + L ALE+ S+ + H D+
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPA 165
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTL 210
+ G +L GL + + + +L TP PE + +S I+S G L
Sbjct: 166 NVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL 225
Query: 211 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF----TDDDGTELVRLASRCLQYEP 266
L ++ + + P + NL L + + +D EL +L + C+ +P
Sbjct: 226 LYEMAALQ--SPFYG----DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 279
Query: 267 RERPN-------PKSLVTALSPLQKETEVPSH 291
+RP+ K + + + H
Sbjct: 280 EKRPDVTYVYDVAKRMHACTASSLEHHH-HHH 310
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 9e-09
Identities = 54/282 (19%), Positives = 97/282 (34%), Gaps = 47/282 (16%)
Query: 42 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE 93
V + R +AVK A + R + E + + + ++ + NLLG C +
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 94 GDE-RLLVAEYMPNETLAKHL----------FHWETHPMKWAMRLRVVLH----LAQALE 138
+++ E+ L+ +L K + L ++ +A+ +E
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 139 YCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF----TPPE 191
+ S+ H DL A IL E ++ FGL ++ Y + PE
Sbjct: 163 FLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220
Query: 192 YLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRNLQMLTDSCLEGQ 245
+ T +S ++SFG LL ++ S P +++ D
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-- 278
Query: 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287
E+ + C EP +RP LV L L +
Sbjct: 279 -------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 3e-08
Identities = 45/249 (18%), Positives = 83/249 (33%), Gaps = 30/249 (12%)
Query: 42 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
V++ K + + AVK+ + R EE + L + R+ L G EG +
Sbjct: 74 VHRMKDKQTGFQCAVKK---VRLEVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
E + +L + + + L + + LEY ++ L+ D+ A +L
Sbjct: 129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSS 185
Query: 161 DGNP-RLSTFGLMKNSRDGKSYSTNLAF-----TP----PEYLRTGRVTPESVIYSFGTL 210
DG+ L FG + + L T PE + + I+S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 211 LLDLLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 266
+L +L+G H I ++ + + L+ EP
Sbjct: 246 MLHMLNGCHPWTQYFRGPLCLKIA-------SEPPPIREIPPSCAPLTAQAIQEGLRKEP 298
Query: 267 RERPNPKSL 275
R + L
Sbjct: 299 VHRASAMEL 307
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 4e-08
Identities = 54/293 (18%), Positives = 97/293 (33%), Gaps = 49/293 (16%)
Query: 42 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-- 98
V K + + R A+K+ R L E + L + + E +
Sbjct: 22 VVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80
Query: 99 -----------LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 147
+ EY N TL + + + R+ + +AL Y S+G +
Sbjct: 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW-RLFRQILEALSYIHSQG--I 137
Query: 148 YH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--------------TP--- 189
H DL I DE N ++ FGL KN + T
Sbjct: 138 IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197
Query: 190 -PEYLR-TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247
E L TG + +YS G + +++ P S ++ + F
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIEFPPDFD 253
Query: 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALS----PLQKETEVPSHVLMGI 296
D+ ++ + ++P +RP ++L L+ P++ + EV L +
Sbjct: 254 DNKMKVEKKIIRLLIDHDPNKRPGARTL---LNSGWLPVKHQDEVIKEALKSL 303
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 5e-08
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP--TVYARRSLCYLMSDMPQDALNDAMQA 412
K KG+ FR K DAI+ Y ++ + Y+ S CY+ + + + +A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALE----LKEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 413 QIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457
+ P + +A+A +G +A L + +++
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASI 110
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 6e-08
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 133 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 188
+ A++YC K + H DL A +L D D N +++ FG G +
Sbjct: 123 IVSAVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 189 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 246
PE + G+ PE ++S G +L L+SG +P +NL+ L + L G++
Sbjct: 181 APELFQ-GKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 247 TDDDG--TELVRLASRCLQYEPRERP 270
T+ L R L P +R
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRG 257
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 6e-08
Identities = 56/287 (19%), Positives = 97/287 (33%), Gaps = 51/287 (17%)
Query: 42 VYKGKL------ENQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNN-RLTNLLGCCCE 93
V ++AVK A + + E + + QL ++ + NLLG C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 94 GDERLLVAEYMPN-----------ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT- 141
L+ EY E ++ +E VL L +
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 142 -SKGRALY-------H-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY--STNLAF--- 187
+KG + H DL A +L ++ FGL ++ +Y N
Sbjct: 181 VAKGME-FLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK 239
Query: 188 -TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP------PSHALDLIRDRNLQMLTDS 240
PE L G T +S ++S+G LL ++ S P ++ LI++
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFY 299
Query: 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287
E E+ + C ++ R+RP+ +L + L + E
Sbjct: 300 ATE---------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 19/160 (11%)
Query: 127 LRVVLHLAQALEYCTSKGRALYH----DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182
LRV+ L AL+ C + + DL + D N +L FGL + S++
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 183 TNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 238
TP PE + +S I+S G LL +L + PP A + + L
Sbjct: 174 KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM--PPFTA------FSQKELA 225
Query: 239 DSCLEGQFT---DDDGTELVRLASRCLQYEPRERPNPKSL 275
EG+F EL + +R L + RP+ + +
Sbjct: 226 GKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 1e-07
Identities = 46/271 (16%), Positives = 81/271 (29%), Gaps = 34/271 (12%)
Query: 28 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNL 87
IV K + E P + + ++ N
Sbjct: 64 PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNT 123
Query: 88 LGCCCEGDERLL---VAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSK 143
+G ++ + E L + + + + L + + +A+A+E+ SK
Sbjct: 124 VGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK 183
Query: 144 GRALYHDL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV-T 199
G ++ DL N I F D ++ FGL+ + T L P TG+V T
Sbjct: 184 G-LMHRDLKPSN---IFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239
Query: 200 P---------------ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244
+ I+S G +L +LL + RNL+
Sbjct: 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLF---- 295
Query: 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ + L P ERP +
Sbjct: 296 ---TQKYPQEHMMVQDMLSPSPTERPEATDI 323
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-07
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K G+ A++QKD + A Y + I+ + T Y ++ Y + + +A
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVE 70
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+ L A A+S G + Q L
Sbjct: 71 VGRETRADYKLIAKAMSRAGNAFQKQNDLSL 101
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 1e-07
Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 33/253 (13%)
Query: 41 VVYKGKLENQRRIAVKR--FNRMAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 96
V++ E ++ A+K + E + +L+ ++++ L
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 155
+V E + L L ++ ++ +A+ G + H DL
Sbjct: 103 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 157
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP----PEYLR-----------TGRV 198
L DG +L FG+ + + + T PE ++ ++
Sbjct: 158 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 216
Query: 199 TPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257
+P+S ++S G +L + GK P ++ I L + D E +F D +L +
Sbjct: 217 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 272
Query: 258 ASRCLQYEPRERP 270
CL+ +P++R
Sbjct: 273 LKCCLKRDPKQRI 285
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 17/176 (9%)
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 157
L+ E+ P L K L + + + LA AL YC + + H D+ +L
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSATF--MEELADALHYCHERK--VIHRDIKPENLL 146
Query: 158 FDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
G +++ FG ++ + + L + PPE + + ++ G L + L
Sbjct: 147 MGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206
Query: 216 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRER 269
G PP + + L S+ L+Y P +R
Sbjct: 207 VGM--PPFD------SPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQR 254
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 406
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 407 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+D A + A Y + +G + ++E
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRE 236
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 8e-06
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
+ G L DA+ + +D + Y RR+ +L + AL D +
Sbjct: 30 LELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQ 88
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+ + A + L G +EA+ K+
Sbjct: 89 LKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 119
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 16/102 (15%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 403
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 253 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPV 312
Query: 404 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+A+ + + P A +A A M +EA +
Sbjct: 313 EAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYET 354
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 41/191 (21%), Positives = 71/191 (37%), Gaps = 16/191 (8%)
Query: 42 VYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97
VY+ + +R +A+K + DP + EAR+ G+L+ + + +
Sbjct: 50 VYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109
Query: 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRI 156
+ + LA L P+ + +V + AL+ + G H D+ I
Sbjct: 110 YVDMRLINGVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDAAHAAG--ATHRDVKPENI 165
Query: 157 LFDEDGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLL 211
L D L FG+ + D K L + PE T + IY+ +L
Sbjct: 166 LVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVL 225
Query: 212 LDLLSGKHIPP 222
+ L+G PP
Sbjct: 226 YECLTGS--PP 234
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 3e-07
Identities = 50/282 (17%), Positives = 91/282 (32%), Gaps = 46/282 (16%)
Query: 42 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDER-- 97
VY+ + + + R A+KR R ++E + +L + + G E
Sbjct: 44 VYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103
Query: 98 ------LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-D 150
LL+ E + + P+ L++ +A+++ + + H D
Sbjct: 104 TGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRD 163
Query: 151 LNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF------------TP----PEYLR 194
L +L G +L FG YS + TP PE +
Sbjct: 164 LKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID 223
Query: 195 TGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT---- 247
+ + I++ G +L L +H P +R + G+++
Sbjct: 224 LYSNFPIGEKQDIWALGCILYLLCFRQH--PFEDGAKLR----------IVNGKYSIPPH 271
Query: 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEVP 289
D T L LQ P ER + +V L + V
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 17/176 (9%)
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 157
L+ EY P T+ + L + + LA AL YC SK + H D+ +L
Sbjct: 86 LILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSKR--VIHRDIKPENLL 141
Query: 158 FDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
G +++ FG ++ + L + PPE + + ++S G L + L
Sbjct: 142 LGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 201
Query: 216 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRER 269
GK PP Q +FT D L SR L++ P +R
Sbjct: 202 VGK--PP------FEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQR 249
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 63/276 (22%), Positives = 100/276 (36%), Gaps = 49/276 (17%)
Query: 35 GEKAPNVVYKGK-LENQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC 92
G A VV + ++A+KR N + L+E +++ Q + + +
Sbjct: 24 GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV 83
Query: 93 EGDERLLVAEYMPN---ETLAKHLFHWETHPMKW------AMRLRVVLHLAQALEYCTSK 143
DE LV + + + KH+ H A LR VL + LEY
Sbjct: 84 VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL---EGLEYLHKN 140
Query: 144 GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVT---- 199
G+ ++ D+ A IL EDG+ +++ FG S LA R T
Sbjct: 141 GQ-IHRDVKAGNILLGEDGSVQIADFG----------VSAFLATGGDITRNKVRKTFVGT 189
Query: 200 -----PESV-----------IYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTD 239
PE + I+SFG ++L +G PP L L + L
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ + G ++ S CLQ +P +RP L
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 4e-07
Identities = 14/91 (15%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K+ G+ A+++KD A++ Y + + + T ++ Y +A
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+ A A + +G + K+
Sbjct: 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 6e-07
Identities = 52/272 (19%), Positives = 87/272 (31%), Gaps = 56/272 (20%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARS-VGQLRNNRLT---NL--LGCCCEG 94
VV++G + + AVKR F + A + L N+ C
Sbjct: 31 VVFQGSFQGRPV-AVKRMLI-------DFCDIALMEIKLLT--ESDDHPNVIRYYCSETT 80
Query: 95 DERL-LVAEYMPNE----TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 149
D L + E +K++ K + ++ +A + + S + H
Sbjct: 81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK--IIH 138
Query: 150 -DLNAYRILFD-------------EDGNPRLSTFGLMKNSRDGKSYSTNLAFTP------ 189
DL IL E+ +S FGL K G+S P
Sbjct: 139 RDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGW 198
Query: 190 --PEYLR-------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--LT 238
PE L R+T I+S G + +LS P R+ N+ +
Sbjct: 199 RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNIIRGIFS 256
Query: 239 DSCLEGQFTDDDGTELVRLASRCLQYEPRERP 270
++ E L S+ + ++P +RP
Sbjct: 257 LDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 288
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 6e-07
Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 1/99 (1%)
Query: 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDAL 406
+ E + + AF D AI + ++ + R+ C++ P+ A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 407 NDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+D A + A Y + +G + ++E
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRE 213
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 7/94 (7%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT---VYARRSLCYLMSDMPQDALNDAMQ 411
+ G L DA+ + +D P Y RR+ +L + AL D +
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 412 AQIISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+ + A + L G +EA+ K+
Sbjct: 63 VIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKK 96
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 3/96 (3%)
Query: 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFID---AGTMVSPTVYARRSLCYLMSDMPQ 403
Q+++ + + R DA Y + + + R C+ + P
Sbjct: 230 QVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPV 289
Query: 404 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 439
+A+ + + P A +A A M +EA
Sbjct: 290 EAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEA 325
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 6e-07
Identities = 27/196 (13%), Positives = 56/196 (28%), Gaps = 44/196 (22%)
Query: 93 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHD-- 150
+ D ++V + + +L + K + + + H
Sbjct: 401 KSDVMVVVNK-LHKYSLVE----------KQPKESTISIPSIYLELKVKLENEYALHRSI 449
Query: 151 LNAYRIL--FDEDGNPRLSTFGL--------MKNSRDGKSYS------TNLAFTPPEYLR 194
++ Y I FD D +KN + + + F +
Sbjct: 450 VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH 509
Query: 195 TGRVTPESVIYSFGTLLLDL-LSGKHIPPSHALD--LIRD--RNLQMLTDSCLEGQFTDD 249
T + S L L +I + L+ L + ++ + ++TD
Sbjct: 510 DS--TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD- 566
Query: 250 DGTELVRLASRCLQYE 265
L+R+A L E
Sbjct: 567 ----LLRIA---LMAE 575
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 5e-06
Identities = 88/559 (15%), Positives = 165/559 (29%), Gaps = 175/559 (31%)
Query: 10 FREFTLEQLKNATSGFAVENIVSEHGEKAPN----VVYKGKLENQRRIAVKRF-NRMAWP 64
++F +E++ F + I +E + + + + +L N ++ K +R
Sbjct: 79 VQKF-VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR---L 134
Query: 65 DP----RQFLEEARS-----------VGQ-------LRNNRLTNL---------LGCCCE 93
P RQ L E R G+ + ++ L C
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194
Query: 94 GDERL-----LVAEYMPNET-LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 147
+ L L+ + PN T + H + + LR +L Y L
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP---YE----NCL 247
Query: 148 YHDLNAYRILFDEDGNPR-LSTFGL----MKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 202
L +L N + + F L + +R K + L+ T ++ +
Sbjct: 248 ---L----VL-LNVQNAKAWNAFNLSCKILLTTRF-KQVTDFLSAA-----TTTHISLDH 293
Query: 203 VIYSFG-----TLLLDLLSGK--HIPPS------HALDLI--RDRNLQMLTDSCLEGQFT 247
+ +LLL L + +P L +I R+ D +
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD-----NWK 348
Query: 248 DDDGTELVRLASRCLQY-EPRERPNPKSLVTALSPLQKETEVPSHVL------------- 293
+ +L + L EP E + + LS +P+ +L
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEY---RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 294 --MGIPHSASVSPLSP-----------LGEACSRRDLTAIH-EILEKISYKDDEGVANEL 339
+ H S+ P L + A+H I++ Y + ++
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH--YNIPKTFDSDD 463
Query: 340 SFQMWTDQ---------MQETLNSKKKG-------DVAF-RQK----------------D 366
+ DQ ++ + ++ D F QK
Sbjct: 464 LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT 523
Query: 367 LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP---IWHIAS 423
L+ ++ Y +I P Y R + ++ +P+ N I S + IA
Sbjct: 524 LQQ-LKFYKPYI---CDNDPK-YERL-VNAILDFLPKIEEN-----LICSKYTDLLRIA- 571
Query: 424 YLQAAALSAMGMENEAQVA 442
L A A+ E QV
Sbjct: 572 -LMAED-EAIFEEAHKQVQ 588
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 8e-07
Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 33/253 (13%)
Query: 41 VVYKGKLENQRRIAVKR--FNRMAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 96
V++ E ++ A+K + E + +L+ ++++ L
Sbjct: 24 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 155
+V E + L L ++ ++ +A+ G + H DL
Sbjct: 84 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 138
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TP----PEYLR-----------TGRV 198
L DG +L FG+ + + + T PE ++ ++
Sbjct: 139 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 197
Query: 199 TPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257
+P+S ++S G +L + GK P ++ I L + D E +F D +L +
Sbjct: 198 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 253
Query: 258 ASRCLQYEPRERP 270
CL+ +P++R
Sbjct: 254 LKCCLKRDPKQRI 266
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 30/201 (14%)
Query: 42 VYKGK-LENQRRIAVK----RFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLL--GCC 91
V+ + L + R +AVK R DP +F EA++ L + + + G
Sbjct: 28 VHLARDLRDHRDVAVKVLRADLAR----DPSFYLRFRREAQNAAALNHPAIVAVYDTGEA 83
Query: 92 CEGDERL--LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 149
L +V EY+ TL + PM + V+ QAL + G + H
Sbjct: 84 ETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNG--IIH 139
Query: 150 -DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPE 201
D+ I+ ++ FG+ + D + T + PE R V
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 202 SVIYSFGTLLLDLLSGKHIPP 222
S +YS G +L ++L+G+ PP
Sbjct: 200 SDVYSLGCVLYEVLTGE--PP 218
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 33/253 (13%)
Query: 41 VVYKGKLENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 96
V++ E ++ A+K N + E + +L+ ++++ L
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYR 155
+V E + L L ++ ++ +A+ G + H DL
Sbjct: 131 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 185
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKS--YSTNLAFTP----PEYLR-----------TGRV 198
L DG +L FG+ + + + PE ++ ++
Sbjct: 186 FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 199 TPESVIYSFGTLLLDLLSGKHIPP-SHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257
+P+S ++S G +L + GK P ++ I L + D E +F D +L +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 258 ASRCLQYEPRERP 270
CL+ +P++R
Sbjct: 301 LKCCLKRDPKQRI 313
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-06
Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 18/182 (9%)
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 157
+ E+ TL + + + + L + + + ++Y SK L + DL I
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LINRDLKPSNIF 154
Query: 158 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLD 213
+ ++ FGL+ + ++ + + T PE + + E +Y+ G +L +
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAE 213
Query: 214 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 273
LL D +G +D + L + L +P +RPN
Sbjct: 214 LLHVCD-TAFETSKFFTD---------LRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTS 263
Query: 274 SL 275
+
Sbjct: 264 EI 265
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 47/283 (16%), Positives = 90/283 (31%), Gaps = 41/283 (14%)
Query: 42 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDE 96
V + L + A+KR D + EA + + L+ C E
Sbjct: 45 VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMR--LRVVLHLAQALEYCTSKGRALYH-DLNA 153
L+ + TL + + L ++L + + LE +KG H DL
Sbjct: 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG--YAHRDLKP 162
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTG----------------R 197
IL ++G P L G M + S +
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222
Query: 198 VTPESVIYSFGTLLLDLLSGKH-----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252
+ + ++S G +L ++ G+ ++ L L + +
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRH--------SS 274
Query: 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET--EVPSHVL 293
L +L + + +P +RP+ L++ L LQ + + +L
Sbjct: 275 ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQHTTQIL 317
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 2e-06
Identities = 29/266 (10%), Positives = 67/266 (25%), Gaps = 47/266 (17%)
Query: 41 VVYKGK------LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN---LLGCC 91
VY+ +N+++ +K +P +F + + +L+ +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKP---ANPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136
Query: 92 CEGDERLLVAEYMPNETL---AKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA-- 146
+ +LV E TL + M + + + + +E
Sbjct: 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHG 196
Query: 147 --------LYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEY-- 192
L + D L G S D K + FT +
Sbjct: 197 DIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQC 253
Query: 193 --LRTGRVTPESV-IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249
+ + + + + + +L G ++ +++ + + D
Sbjct: 254 VEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLD 306
Query: 250 DGTELVRLASRCLQYEPRERPNPKSL 275
E L L
Sbjct: 307 MWNEFFH---VMLNIPDCHHLPSLDL 329
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 42/265 (15%), Positives = 78/265 (29%), Gaps = 43/265 (16%)
Query: 41 VVYKG-KLENQRRIAVKRFNRMAWPDP--RQFLEEARSVGQLRNNR-LTNLLGCCCEGDE 96
V+K K + A+KR + + L E + L + + E D
Sbjct: 26 SVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDH 85
Query: 97 RLLVAEYMPNETLAKHL--FHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNA 153
L+ EY +LA + + K A ++L + + L Y S L H D+
Sbjct: 86 MLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS--LVHMDIKP 143
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLA-F--------------TP----PEYLR 194
I P ++ ++ + E L+
Sbjct: 144 SNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQ 203
Query: 195 -TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQFTDDD 250
P++ I++ ++ + P D IR L + +
Sbjct: 204 ENYTHLPKADIFALALTVVCAAGAE--PLPRNGDQWHEIRQGRL-----PRIPQVLSQ-- 254
Query: 251 GTELVRLASRCLQYEPRERPNPKSL 275
E L + +P RP+ +L
Sbjct: 255 --EFTELLKVMIHPDPERRPSAMAL 277
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 5e-06
Identities = 46/214 (21%), Positives = 80/214 (37%), Gaps = 35/214 (16%)
Query: 74 RSVGQLRNNRLTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLH 132
+ + + N+R L E + L LV M L H++H A R V +
Sbjct: 235 KQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFY 291
Query: 133 LAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF-- 187
A+ LE + +Y DL IL D+ G+ R+S GL + +G++
Sbjct: 292 AAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVG 347
Query: 188 TPPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQML 237
T Y+ PE V + G LL ++++G+ P + + +
Sbjct: 348 T-VGYM-----APEVVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKIKREEV 397
Query: 238 TDSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 269
E +++ + L S+ L +P ER
Sbjct: 398 ERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 5e-06
Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 41/173 (23%)
Query: 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFD-EDGN 163
E ++ F + A+++C S+G + H D+ IL D G
Sbjct: 137 GEGPSRCFFG----------------QVVAAIQHCHSRG--VVHRDIKDENILIDLRRGC 178
Query: 164 PRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKH 219
+L FG D Y+ ++PPE++ + + ++S G LL D++ G
Sbjct: 179 AKLIDFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI 237
Query: 220 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERP 270
P I LE + + L RCL +P RP
Sbjct: 238 --PFERDQEI------------LEAELHFPAHVSPDCCALIRRCLAPKPSSRP 276
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K +G+ F K+ +AI+ Y I+ P Y+ S CY+ + + + +A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALK 444
I P A +A+A ++G +A L
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLS 117
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 6e-06
Identities = 42/193 (21%), Positives = 66/193 (34%), Gaps = 24/193 (12%)
Query: 88 LGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEYCTSK 143
+ ++L + + M L HL + + A+ LE+ ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNR 311
Query: 144 GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVT 199
+Y DL IL DE G+ R+S GL + K ++ T PE L+ G
Sbjct: 312 F-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--SVGTHGYMAPEVLQKGVAY 368
Query: 200 PESVIY-SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ--FTDDDGTELVR 256
S + S G +L LL G P ++ + L D EL
Sbjct: 369 DSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 257 LASRCLQYEPRER 269
L LQ + R
Sbjct: 424 LLEGLLQRDVNRR 436
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 8e-06
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 21/148 (14%)
Query: 133 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL---MKNSRDGKSYSTNL--- 185
L LEY S+G + H D+ +L G ++S G+ + + T+
Sbjct: 118 LIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 186 AFTPPEYLRTGRV--TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 243
AF PPE + I+S G L ++ +G P N+ L ++ +
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG-LYP-------FEGDNIYKLFENIGK 227
Query: 244 GQFT--DDDGTELVRLASRCLQYEPRER 269
G + D G L L L+YEP +R
Sbjct: 228 GSYAIPGDCGPPLSDLLKGMLEYEPAKR 255
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 8e-06
Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 41/173 (23%)
Query: 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRILFDED-GN 163
E LA+ F + +A+ +C + G + H D+ IL D + G
Sbjct: 147 QEELARSFFW----------------QVLEAVRHCHNCG--VLHRDIKDENILIDLNRGE 188
Query: 164 PRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKH 219
+L FG +D Y+ ++PPE++R R + ++S G LL D++ G
Sbjct: 189 LKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247
Query: 220 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRERP 270
P + I + GQ +E L CL P +RP
Sbjct: 248 --PFEHDEEI------------IRGQVFFRQRVSSECQHLIRWCLALRPSDRP 286
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 8e-06
Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 32/160 (20%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 183
R++ + + Y + H DL +L +D N R+ FGL + K
Sbjct: 130 RIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD 187
Query: 184 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239
T PE L G + ++S G +L LLSG PP + N +
Sbjct: 188 -KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGC--PPFN------GANEYDILK 237
Query: 240 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 270
+G++T + +L+R + L Y P R
Sbjct: 238 KVEKGKYTFELPQWKKVSESAKDLIR---KMLTYVPSMRI 274
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 1e-05
Identities = 46/275 (16%), Positives = 76/275 (27%), Gaps = 29/275 (10%)
Query: 34 HGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPR--QFLEEARSVGQLRNNRLTNLLGC 90
G + V + + V+R N A + E + +
Sbjct: 35 KGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRAT 94
Query: 91 CCEGDERLLVAEYMPNETLAKHLFHWETHPMK---WAMRLRVVLHLAQALEYCTSKGRAL 147
+E +V +M + + M A L+ VL +AL+Y G
Sbjct: 95 FIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL---KALDYIHHMGYV- 150
Query: 148 YH-DLNAYRILFDEDGNPRLSTFGL-------MKNSRDGKSYSTNLAFTP----PEYLRT 195
H + A IL DG LS + R + PE L+
Sbjct: 151 -HRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ 209
Query: 196 GRV--TPESVIYSFGTLLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249
+S IYS G +L +G +P + L + + L D+
Sbjct: 210 NLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELT 269
Query: 250 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284
S P P + + P +
Sbjct: 270 MSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHR 304
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 34/179 (18%), Positives = 62/179 (34%), Gaps = 18/179 (10%)
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLNAYRIL 157
LV E N + ++L P + + + Y S G + H DL +L
Sbjct: 88 LVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLYLHSHG--ILHRDLTLSNLL 144
Query: 158 FDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFGTLLLD 213
+ N +++ FGL + + + T + PE ES ++S G +
Sbjct: 145 LTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYT 204
Query: 214 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT--DDDGTELVRLASRCLQYEPRERP 270
LL G+ PP ++ + + + E L + L+ P +R
Sbjct: 205 LLIGR--PPFD------TDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRL 255
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 133 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYSTN---LAF 187
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 124 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 181
Query: 188 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 182 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 233
Query: 248 --DDDGTELVRLASRCLQYEPRERPNPKSLV 276
L + LQ +P RP L+
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELL 264
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 32/160 (20%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 183
++ + + Y + H DL +L ++D ++ FGL + K
Sbjct: 140 VIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKE 197
Query: 184 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239
T PE LR + + ++S G +L LL+G PP + Q +
Sbjct: 198 -RLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGY--PP------FGGQTDQEILR 247
Query: 240 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 270
+G++T + +L++ + LQ++ + R
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDLIK---QMLQFDSQRRI 284
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRL------RVVLHLAQALEYCTSKGRALYH-DL 151
++ EYM N+++ K ++ + + ++ + + Y ++ + + H D+
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-KNICHRDV 178
Query: 152 ---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYL--RTGRVTPESVI 204
N IL D++G +LS FG + D K + F PPE+ + + I
Sbjct: 179 KPSN---ILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235
Query: 205 YSFGTLLLDLLSGKHIPP 222
+S G L + P
Sbjct: 236 WSLGICLYVMFYNV--VP 251
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 32/160 (20%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 183
++ + + Y + H D+ IL + N ++ FGL
Sbjct: 150 NIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 184 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239
T PE L+ + + ++S G ++ LL G PP +N Q +
Sbjct: 208 -RLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGY--PPFGG------QNDQDIIK 257
Query: 240 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 270
+G++ D+ EL++ L Y+ +R
Sbjct: 258 KVEKGKYYFDFNDWKNISDEAKELIK---LMLTYDYNKRC 294
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 1e-05
Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 18/141 (12%)
Query: 325 EKISYKDDEGVANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQ-------- 376
E + ++ + + + + +++Q + K++G+ F++ ++ +AI Y +
Sbjct: 15 ENLYFQGAKKSIYDYTDE---EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT 71
Query: 377 -------FIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429
+D + + + CY + A++ A + I A Y A
Sbjct: 72 EEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVA 131
Query: 430 LSAMGMENEAQVALKEGTTLE 450
G EA+ L + +L
Sbjct: 132 NMYFGFLEEAKENLYKAASLN 152
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 43/213 (20%), Positives = 81/213 (38%), Gaps = 30/213 (14%)
Query: 74 RSVGQLRNNR-LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVL 131
+ + ++R + +L E L LV M + H+++ + + R +
Sbjct: 236 KKILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP-RAIF 293
Query: 132 HLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT 188
+ AQ LE+ + +Y DL +L D+DGN R+S GL + G++ + A T
Sbjct: 294 YTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 189 PPEYLRTGRVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT 238
P ++ PE ++ + G L ++++ + P A + L
Sbjct: 353 -PGFM-----APELLLGEEYDFSVDYFALGVTLYEMIAAR--GPFRARG--EKVENKELK 402
Query: 239 DSCLEGQ--FTDDDGTELVRLASRCLQYEPRER 269
LE + D LQ +P +R
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKR 435
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 17/151 (11%)
Query: 133 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGL-MKNSRDGKSYST---NLAF 187
+ +Y + H DL + +ED ++ FGL K DG+ +
Sbjct: 150 IVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNY 207
Query: 188 TPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247
PE L + E ++S G ++ LL GK PP L+ + +++
Sbjct: 208 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK--PPFE------TSCLKETYLRIKKNEYS 259
Query: 248 --DDDGTELVRLASRCLQYEPRERPNPKSLV 276
L + LQ +P RP L+
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELL 290
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 40/165 (24%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 183
+++ L + + + H DL N IL D+D N +L+ FG G+
Sbjct: 128 KIMRALLEVICALHKLN--IVHRDLKPEN---ILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 184 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 233
+ TP PE + E ++S G ++ LL+G PP R
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRK 233
Query: 234 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 269
++ + G + D +LV R L +P++R
Sbjct: 234 QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKR 275
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 46/250 (18%), Positives = 95/250 (38%), Gaps = 20/250 (8%)
Query: 35 GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93
GE + VYK E + +A+K+ + D ++ ++E + Q + + G +
Sbjct: 38 GEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
+ +V EY +++ + + ++ + LEY + ++ D+ A
Sbjct: 96 NTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK-IHRDIKA 153
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGT 209
IL + +G+ +L+ FG+ D + + TP PE ++ + I+S G
Sbjct: 154 GNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGI 213
Query: 210 LLLDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265
+++ GK I P A+ +I ++D +CL
Sbjct: 214 TAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKP---ELWSD----NFTDFVKQCLVKS 266
Query: 266 PRERPNPKSL 275
P +R L
Sbjct: 267 PEQRATATQL 276
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 41/160 (25%), Positives = 56/160 (35%), Gaps = 32/160 (20%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 183
R++ + A+ YC + H DL LF D +L FGL + GK T
Sbjct: 110 RIMKDVLSAVAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
Query: 184 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239
TP P+ L G PE +S G ++ LL G PP +
Sbjct: 168 -KVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGY--PPFS------APTDSEVML 217
Query: 240 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 270
EG FT L+R R L P++R
Sbjct: 218 KIREGTFTFPEKDWLNVSPQAESLIR---RLLTKSPKQRI 254
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 4/103 (3%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K +G+ ++ + +AIE Y + + T R+ + A++ A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVE 66
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457
+ + + + +G LK+ T+E + S
Sbjct: 67 QGREMRADYKVISKSFARIGNAYHKLGDLKK--TIEYYQKSLT 107
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 16/108 (14%)
Query: 357 KGDVAFRQKDLKDAIECYTQFI-----DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQ 411
+G F + D +A++ YT+ I DA Y+ R+ +A+ D +
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIKRAPEDA------RGYSNRAAALAKLMSFPEAIADCNK 198
Query: 412 AQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL-----EAKKN 454
A P + A +A A A+ A L T
Sbjct: 199 AIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSA 246
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 4e-05
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 346 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------------TV 388
D+++ ++KG+ F QKD K+AI+ Y +D + +
Sbjct: 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPL 65
Query: 389 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 448
YA S CYL +A + + A + +A A A +EA+ LK
Sbjct: 66 YANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLR 125
Query: 449 LE 450
Sbjct: 126 NH 127
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 34/164 (20%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF-DEDGNP---RLSTFGLMKNSRDGK 179
V+ + + +EY ++G H DL N IL+ DE GNP R+ FG K R
Sbjct: 120 AVLFTITKTVEYLHAQGVV--HRDLKPSN---ILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 180 SYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 235
+T PE L I+S G LL +L+G P D +
Sbjct: 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG--YTPFANG---PDDTPE 229
Query: 236 MLTDSCLEGQFTDDDGT---------ELVRLASRCLQYEPRERP 270
+ G+F+ G +LV + L +P +R
Sbjct: 230 EILARIGSGKFSLSGGYWNSVSDTAKDLVS---KMLHVDPHQRL 270
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* Length = 148 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 5e-05
Identities = 13/111 (11%), Positives = 28/111 (25%), Gaps = 2/111 (1%)
Query: 336 ANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSL 394
+ + M + +TL ++ +DA + +
Sbjct: 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGA 63
Query: 395 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 445
C A++ ++ + A L G EA+ L
Sbjct: 64 CRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFL 114
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 6e-05
Identities = 12/107 (11%), Positives = 28/107 (26%), Gaps = 2/107 (1%)
Query: 340 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM 398
+ M ++TL G ++ DA + + + C
Sbjct: 6 TLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQS 64
Query: 399 SDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+ + AL ++ + A +G + A+
Sbjct: 65 LGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYS 111
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 23/245 (9%)
Query: 41 VVYKGK-LENQRRIAVKRFN-RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
V+KG Q+ +A+K + A + +E + Q + +T G + +
Sbjct: 37 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLW 96
Query: 99 LVAEYMPNETLAKHLFHWETHPMKW-AMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 157
++ EY+ + L A LR +L + L+Y S+ + ++ D+ A +L
Sbjct: 97 IIMEYLGGGSAL-DLLEPGPLDETQIATILREIL---KGLDYLHSEKK-IHRDIKAANVL 151
Query: 158 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLD 213
E G +L+ FG+ D + TP PE ++ ++ I+S G ++
Sbjct: 152 LSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211
Query: 214 LLSGKHIPPSHALDLIRDRNLQMLTDS---CLEGQFTDDDGTELVRLASRCLQYEPRERP 270
L G+ PP L ++ L ++ + LEG ++ L CL EP RP
Sbjct: 212 LARGE--PPHSELHPMK--VLFLIPKNNPPTLEGNYSK----PLKEFVEACLNKEPSFRP 263
Query: 271 NPKSL 275
K L
Sbjct: 264 TAKEL 268
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 31/159 (19%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 183
++ + AL Y S+ + H DL ILF ++ FGL + + + +
Sbjct: 128 ELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Query: 184 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239
T PE + VT + I+S G ++ LL+G P +L+ +
Sbjct: 186 AAG-TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEVQQ 235
Query: 240 SCLEGQFT--------DDDGTELVRLASRCLQYEPRERP 270
+ +L++ + L +P RP
Sbjct: 236 KATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRP 271
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 7e-05
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 19/145 (13%)
Query: 133 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFT 188
+ A++YC + H DL +L D N +++ FGL DG+ T + +
Sbjct: 120 ILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYA 177
Query: 189 PPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 246
PE + GR PE I+S G +L LL G +P D ++ L G F
Sbjct: 178 APEVIS-GRLYAGPEVDIWSCGVILYALLCG-TLP-------FDDEHVPTLFKKIRGGVF 228
Query: 247 T--DDDGTELVRLASRCLQYEPRER 269
+ + L LQ +P +R
Sbjct: 229 YIPEYLNRSVATLLMHMLQVDPLKR 253
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 8e-05
Identities = 45/248 (18%), Positives = 86/248 (34%), Gaps = 23/248 (9%)
Query: 42 VYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VYK K E A K + + ++ E + + + LLG + ++
Sbjct: 35 VYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
E+ P + + + V + +AL + SK ++ DL A +L
Sbjct: 95 IEFCPGGAVDA-IMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI-IHRDLKAGNVLMTL 152
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PE-----YLRTGRVTPESVIYSFGTLL 211
+G+ RL+ FG+ + + TP PE ++ ++ I+S G L
Sbjct: 153 EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL 212
Query: 212 LDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267
+++ + + P L I + L +++ E L P
Sbjct: 213 IEMAQIEPPHHELNPMRVLLKIAKSDPPTLLT---PSKWSV----EFRDFLKIALDKNPE 265
Query: 268 ERPNPKSL 275
RP+ L
Sbjct: 266 TRPSAAQL 273
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 32/160 (20%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 183
R++ + + Y + H DL IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 184 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239
T PE LR G + ++S G +L LLSG PP + +N +
Sbjct: 183 -RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG--TPPFY------GKNEYDILK 232
Query: 240 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 270
G++ DD +L+R + L + P R
Sbjct: 233 RVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 1e-04
Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 28/173 (16%)
Query: 68 QFLEEARSVGQLRNNR-LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETH-PMKWA 124
F EE R V + R +T L + + L LV EY L L + P + A
Sbjct: 107 CFREE-RDVLVNGDRRWITQLH-FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 125 MRLRVVLHLAQ---ALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL-MKNSRDGKS 180
+LA+ A++ G ++ D+ IL D G+ RL+ FG +K DG
Sbjct: 165 -----RFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Query: 181 YSTNLAFTP----PEYLRTGRVTPESVIY-------SFGTLLLDLLSGKHIPP 222
S TP PE L+ P + Y + G ++ G+ P
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ--TP 269
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 1e-04
Identities = 46/251 (18%), Positives = 83/251 (33%), Gaps = 53/251 (21%)
Query: 41 VVYKGK--LENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDER 97
+Y N R + +K + + + E + + ++ + + + D
Sbjct: 95 WIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH 154
Query: 98 L-----LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL- 151
+V EY+ ++L + + A + +L + AL Y S G +Y+DL
Sbjct: 155 GDPVGYIVMEYVGGQSLKRSK----GQKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLK 209
Query: 152 --NAYRILFDEDGNPRLSTFGLMKN-SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFG 208
N I+ E+ +L G + + G Y T F PE +R T + IY+ G
Sbjct: 210 PEN---IMLTEEQ-LKLIDLGAVSRINSFGYLYGT-PGFQAPEIVR-TGPTVATDIYTVG 263
Query: 209 TLLLDLLSG---------KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259
L L +P + D RL
Sbjct: 264 RTLAALTLDLPTRNGRYVDGLPEDDPVLKTYD---------------------SYGRLLR 302
Query: 260 RCLQYEPRERP 270
R + +PR+R
Sbjct: 303 RAIDPDPRQRF 313
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 40/165 (24%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 183
++ L +A+ + + + H DL N IL D++ RLS FG + G+
Sbjct: 204 SIMRSLLEAVSFLHANN--IVHRDLKPEN---ILLDDNMQIRLSDFGFSCHLEPGEKLRE 258
Query: 184 NLAFTP----PEYLRTGRV------TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 233
L TP PE L+ E +++ G +L LL+G PP R
Sbjct: 259 -LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRR 309
Query: 234 LQMLTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRER 269
++ +EGQ+ +L+ R LQ +P R
Sbjct: 310 QILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEAR 351
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A Length = 336 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 1e-04
Identities = 19/126 (15%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 340 SFQMWTDQMQETLNSKK-KGDVAFRQKDLKDAIECYTQ---FIDAGTMVSP--------- 386
S++M +++ E K +G V F++ K A+ Y + +++ + S
Sbjct: 135 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 194
Query: 387 --TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 444
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 254
Query: 445 EGTTLE 450
+ L
Sbjct: 255 KVLQLY 260
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 36/163 (22%), Positives = 60/163 (36%), Gaps = 38/163 (23%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DL---NAYRILF---DEDGNPRLSTFGLMKNSRDGKS 180
R++ + + Y + H DL N IL ++D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYMHKHN--IVHRDLKPEN---ILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 181 YSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 236
T PE LR G + ++S G +L LLSG PP + +N
Sbjct: 180 MKD-RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFYG------KNEYD 229
Query: 237 LTDSCLEGQFT---------DDDGTELVRLASRCLQYEPRERP 270
+ G++ DD +L+R + L + P R
Sbjct: 230 ILKRVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 19/142 (13%)
Query: 136 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPE 191
A+EYC + H DL +L D++ N +++ FGL DG T + + PE
Sbjct: 120 AIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 177
Query: 192 YLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT-- 247
+ G+ PE ++S G +L +L G +P D + L +
Sbjct: 178 VIN-GKLYAGPEVDVWSCGIVLYVMLVG-RLP-------FDDEFIPNLFKKVNSCVYVMP 228
Query: 248 DDDGTELVRLASRCLQYEPRER 269
D L R + +P +R
Sbjct: 229 DFLSPGAQSLIRRMIVADPMQR 250
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 2e-04
Identities = 10/140 (7%), Positives = 39/140 (27%), Gaps = 4/140 (2%)
Query: 322 EILEKISYKDDEGVANELSFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDA 380
E IS + + + + + + ++ + + +++A +
Sbjct: 6 TENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY 65
Query: 381 GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQ 440
+ + Y + + Q A + A + + + + +A+
Sbjct: 66 DFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAK 124
Query: 441 VALKEGTTLEAKKNSTAGQK 460
+ ++ + K
Sbjct: 125 ECFEL--VIQHSNDEKLKIK 142
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 45/231 (19%), Positives = 83/231 (35%), Gaps = 32/231 (13%)
Query: 128 RVVLHLAQALEYCTSKGRALYH-DLNAYRILF---DEDGNPRLSTFGLMKNSRDGKSYST 183
++ + +A++Y S A H D+ +L+ + +L+ FG K + S +T
Sbjct: 165 EIMKSIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT 222
Query: 184 NLAFTP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD 239
+TP PE L + ++S G ++ LL G PP ++ +
Sbjct: 223 -PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY--PPFYSNH--GLAISPGMKT 277
Query: 240 SCLEGQFT---------DDDGTELVRLASRCLQYEPRERPNPKSLVTALS-P-LQKETEV 288
GQ+ ++ L+R L+ EP +R ++ P + + T+V
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIR---NLLKTEPTQRMTITE---FMNHPWIMQSTKV 331
Query: 289 PSHVLMGIPHSASVSPLSPLGEACSRRDLTAIHEILEKISYKDDEGVANEL 339
P L + L + E+I K E +N L
Sbjct: 332 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKKIEDASNPL 382
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 16/146 (10%)
Query: 133 LAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP--- 189
L AL+Y ++ ++ D+ IL DE G+ ++ F + +T +A T
Sbjct: 124 LVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT-MAGTKPYM 181
Query: 190 -PEYLRTGRVTPESVI---YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG- 244
PE + + S +S G +LL G+ P H + + + +
Sbjct: 182 APEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR--RPYHIRS---STSSKEIVHTFETTV 236
Query: 245 -QFTDDDGTELVRLASRCLQYEPRER 269
+ E+V L + L+ P +R
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQR 262
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 42/205 (20%)
Query: 84 LTNLLGCCCEGDERL-LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQ---ALEY 139
LT L + +RL V EY L HL R + A+ AL+Y
Sbjct: 210 LTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-----RARFYGAEIVSALDY 263
Query: 140 CTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK-NSRDGKSYSTNLAF--TPPEYLRTG 196
S+ +Y DL ++ D+DG+ +++ FGL K +DG + T F T PEYL
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL--- 316
Query: 197 RVTPESVIY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG-- 244
PE + G ++ +++ G+ P +++ + L + L
Sbjct: 317 --APEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEI 366
Query: 245 QFTDDDGTELVRLASRCLQYEPRER 269
+F G E L S L+ +P++R
Sbjct: 367 RFPRTLGPEAKSLLSGLLKKDPKQR 391
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 22/149 (14%)
Query: 133 LAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN----LAF 187
L + +EY + + H D+ +L EDG+ +++ FG+ + + +N AF
Sbjct: 146 LIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF 203
Query: 188 TPPEYLRTGRVT---PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244
PE L R +++ G L + G P D + L
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFG-QCP-------FMDERIMCLHSKIKSQ 255
Query: 245 QFT----DDDGTELVRLASRCLQYEPRER 269
D +L L +R L P R
Sbjct: 256 ALEFPDQPDIAEDLKDLITRMLDKNPESR 284
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 5e-04
Identities = 39/144 (27%), Positives = 58/144 (40%), Gaps = 23/144 (15%)
Query: 136 ALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST-----NLAFTP 189
++YC + H DL +L D N +++ FGL DG+ T N A
Sbjct: 128 GVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA-- 183
Query: 190 PEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247
PE + GR PE I+S G +L LL G +P D ++ L +G F
Sbjct: 184 PEVIS-GRLYAGPEVDIWSSGVILYALLCG-TLP-------FDDDHVPTLFKKICDGIFY 234
Query: 248 --DDDGTELVRLASRCLQYEPRER 269
++ L LQ +P +R
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKR 258
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 41.2 bits (96), Expect = 6e-04
Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 26/204 (12%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-------- 91
V + + ++A+K+ + P R+ + ++ N++
Sbjct: 29 YVLRWIHQDTGEQVAIKQCRQELSPKNRERWC--LEIQIMKKLNHPNVVSAREVPDGLQK 86
Query: 92 -CEGDERLLVAEYMPNETLAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 149
D LL EY L K+L +K ++ ++ AL Y + H
Sbjct: 87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR--IIH 144
Query: 150 -DLNAYRILFDEDGNPR---LSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPE 201
DL I+ + G K G+ + + T PE L + T
Sbjct: 145 RDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG-TLQYLAPELLEQKKYTVT 203
Query: 202 SVIYSFGTLLLDLLSGKHIPPSHA 225
+SFGTL + ++G P
Sbjct: 204 VDYWSFGTLAFECITGF--RPFLP 225
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 48/253 (18%), Positives = 89/253 (35%), Gaps = 31/253 (12%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
+VY G+ L NQ RIA+K + EE L++ + LG E +
Sbjct: 37 IVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI 96
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRL--RVVLHLAQALEYCTSKGRALYH-DLNAYRI 156
E +P +L+ L + P+K + + + L+Y H D+ +
Sbjct: 97 FMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV--HRDIKGDNV 153
Query: 157 LFD-EDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRV--TPESVIYSFGT 209
L + G ++S FG K + T PE + G + I+S G
Sbjct: 154 LINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGC 213
Query: 210 LLLDLLSGKHIPPSHALDLIRDRNLQML-----TDSC--LEGQFTDDDGTELVRLASRCL 262
++++ +GK PP + L + + + + + +C
Sbjct: 214 TIIEMATGK--PPFYEL----GEPQAAMFKVGMFKVHPEIPESMS-AEAKAFIL---KCF 263
Query: 263 QYEPRERPNPKSL 275
+ +P +R L
Sbjct: 264 EPDPDKRACANDL 276
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 7e-04
Identities = 44/257 (17%), Positives = 84/257 (32%), Gaps = 26/257 (10%)
Query: 45 GKLENQRRIAVKRF--NRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102
G L R F + RQ + ++ RL ++ + +
Sbjct: 112 GNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171
Query: 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 162
+ + + + + +A+ +E+ S+ + ++ DL A IL E
Sbjct: 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKN 230
Query: 163 NPRLSTFGLMKNSRDGKSY--STNLAF----TPPEYLRTGRVTPESVIYSFGTLLLDLLS 216
++ FGL ++ Y + PE + T +S ++SFG LL ++ S
Sbjct: 231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Query: 217 GKHIP------PSHALDLIRDRNLQMLT-DSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
P +++ +M D E+ + C EP +R
Sbjct: 291 LGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTTP---------EMYQTMLDCWHGEPSQR 340
Query: 270 PNPKSLVTALSPLQKET 286
P LV L L +
Sbjct: 341 PTFSELVEHLGNLLQAN 357
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 460 | |||
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.98 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.92 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.86 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.86 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.83 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.79 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.77 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.76 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.76 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.75 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.74 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.73 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.73 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.71 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.7 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.66 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.65 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.64 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.64 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.64 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.63 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.62 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.62 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.62 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.62 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.61 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.61 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.6 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.6 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.59 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.59 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.59 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.59 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.59 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.59 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.58 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.57 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.57 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.56 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.55 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.55 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.54 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.53 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.52 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.52 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.51 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.51 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.51 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.49 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.49 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.48 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.48 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.43 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.43 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.43 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.43 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.41 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.41 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.4 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.4 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.39 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.38 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.38 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.38 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.37 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.36 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.36 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.36 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.36 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.36 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.35 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.35 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.35 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.34 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.34 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.33 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.33 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.33 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.32 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.32 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.32 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.32 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.32 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.32 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.32 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.32 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.32 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.32 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.31 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.31 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.3 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.3 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.3 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.29 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.27 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.27 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.27 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.26 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.26 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.26 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.26 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.26 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.25 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.25 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.25 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.25 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.24 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.24 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.24 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.24 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.23 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.23 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.22 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.22 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.21 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.2 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.2 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.17 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.16 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.15 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.15 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.14 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.14 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.13 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.12 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.12 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.12 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.11 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.11 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.11 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.11 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.11 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.11 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.1 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.1 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.09 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.08 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.08 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.08 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.08 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.08 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.08 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.07 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.07 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.06 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.06 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.06 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.06 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.05 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.05 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.03 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.03 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 99.03 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.03 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.03 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.02 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.02 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 99.02 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.02 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.01 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 99.01 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 99.01 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.01 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.01 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.0 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.99 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.98 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.98 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.97 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.97 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.97 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.97 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.96 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.96 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.96 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.94 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.92 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.91 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.89 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.88 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.87 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.86 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.85 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.85 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.84 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.84 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.83 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.81 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.8 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.8 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.79 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.79 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.76 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.73 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.73 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.7 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.68 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.67 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.66 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.65 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.65 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.63 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.61 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.57 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.55 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.55 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.53 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.49 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.47 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.47 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.41 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.4 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.39 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.36 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.35 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.34 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.29 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.25 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.2 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 98.18 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.15 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.14 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 98.1 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 98.09 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.07 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.06 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.05 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.01 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 98.0 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.98 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.95 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.87 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.85 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.84 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.8 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.77 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.76 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.74 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.71 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.63 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.58 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.57 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.56 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 97.54 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.53 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.49 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.46 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.46 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.41 |
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-59 Score=439.20 Aligned_cols=248 Identities=17% Similarity=0.211 Sum_probs=210.7
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
+.++|+++++||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.+|++|+|||||++++++..++.+|||
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 346899999999999999999995 569999999997654332 56799999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
||||+||+|.+++....+..+++..++.|+.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK-ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 99999999999997666677899999999999999999999999 999999999999999999999999999876543
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....||+.|||||++.+..++.++|||||||++|||+||+.||.+.....+......... ...+..+++++.+
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~s~~~~~ 255 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-----PPVSLHYSYDLRS 255 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----CCCCTTSCHHHHH
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----CCCCccCCHHHHH
Confidence 345799999999999999999999999999999999999999987655444333222111 1234567889999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
||.+||+.||++|||+.++++
T Consensus 256 li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 256 LVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999986
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-58 Score=427.96 Aligned_cols=256 Identities=19% Similarity=0.274 Sum_probs=208.9
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.++++++.++||+|+||+||+|++.+ .||||+++...... .+.|.+|+.++++++|||||++++++.. +.++|||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 45678889999999999999998643 59999987554332 4679999999999999999999998864 5689999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD---- 177 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~---- 177 (460)
|||+||+|.+++.. ...++++..+..|+.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+....
T Consensus 111 Ey~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 111 QWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp ECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred EcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999964 3457999999999999999999999999 99999999999999999999999999986542
Q ss_pred --CCCccCCCcccCcccccc---CCCCCCCceehHHHHHHHHhhCCCCCCChhhh-hhhhccccccccccccCCCCchhH
Q 012608 178 --GKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 178 --~~~~~~t~~y~aPE~~~~---~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
.....||+.|||||++.+ ++++.++|||||||++|||+||+.||...... .+..........+ .....+..++
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~ 267 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP-DLSKLYKNCP 267 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCC-CSTTSCTTSC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC-Ccccccccch
Confidence 234579999999999864 35899999999999999999999999754322 1111111111111 1224556788
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+++.+|+.+||+.||++|||+.++++.|+.++..
T Consensus 268 ~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 268 KAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999887643
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-58 Score=435.49 Aligned_cols=251 Identities=19% Similarity=0.265 Sum_probs=216.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..|+++++||+|+||+||+|+. .+|+.||||+++.......+.+.+|+.+|++++|||||++++++..++.+|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4589999999999999999995 569999999997766666778999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
+||+|.+++.. +.+++..+..++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+++..... .+
T Consensus 154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 99999999863 56999999999999999999999999 999999999999999999999999999865432 46
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..||+.|||||++.+..++.++|||||||++|||++|+.||.+............... +....+..+++++.+||.+
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC---CCCSCGGGSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCCccccCCHHHHHHHHH
Confidence 7899999999999988999999999999999999999999977644333222211111 1112345678999999999
Q ss_pred HcccCCCCCCChhHHHHHhcccccc
Q 012608 261 CLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
||+.||++|||+.++++ .++...
T Consensus 307 ~L~~dP~~R~ta~e~l~--Hp~~~~ 329 (346)
T 4fih_A 307 LLVRDPAQRATAAELLK--HPFLAK 329 (346)
T ss_dssp HSCSSTTTSCCHHHHTT--CGGGGG
T ss_pred HcCCChhHCcCHHHHhc--CHhhcC
Confidence 99999999999999987 455444
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-58 Score=431.71 Aligned_cols=254 Identities=24% Similarity=0.299 Sum_probs=214.9
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.++.+.++||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++++|..++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45778899999999999999853 478899999986654446789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhcc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEcc
Q 012608 100 VAEYMPNETLAKHLFHW-----------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 168 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~-----------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 168 (460)
|||||+||+|.+++... ....+++..+..|+.||+.||.|||+++ ||||||||+|||+++++.+||+|
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDlKp~NILl~~~~~~Ki~D 171 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGD 171 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECC
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccCHhhEEECCCCcEEECC
Confidence 99999999999999653 2357999999999999999999999999 99999999999999999999999
Q ss_pred CCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccccc
Q 012608 169 FGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSC 241 (460)
Q Consensus 169 Fg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 241 (460)
||+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||.......+.......
T Consensus 172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~----- 246 (299)
T 4asz_A 172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG----- 246 (299)
T ss_dssp CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT-----
T ss_pred cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----
Confidence 9999754332 23458999999999999999999999999999999999 89998765443333222111
Q ss_pred ccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 242 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.....|..+|+++.+|+.+||+.||++|||++++++.|+.+.+.
T Consensus 247 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 247 RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11234567889999999999999999999999999999887653
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-58 Score=429.80 Aligned_cols=254 Identities=20% Similarity=0.263 Sum_probs=215.2
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
.+++++++++||+|+||+||+|.+. +++.||||+++..... ..+.|.+|+.++++++|||||+++|+|..++.
T Consensus 24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 3466788999999999999999852 4688999999765433 36789999999999999999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG 162 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~ 162 (460)
.++|||||+||+|.+++.... ...+++..+..|+.||+.||+|||+++ ||||||||+|||+++++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-VVHKDLATRNVLVYDKL 182 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCccccceEECCCC
Confidence 999999999999999996432 246899999999999999999999999 99999999999999999
Q ss_pred CeEEccCCCcccCCC------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccc
Q 012608 163 NPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQ 235 (460)
Q Consensus 163 ~~kl~DFg~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 235 (460)
.+||+|||+++.... .....||+.|||||++.++.++.++|||||||++|||+| |..||.+.....+......
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~ 262 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 262 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999999975432 234568999999999999999999999999999999999 8888876554433322221
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
. .....|..+|+++.+|+.+||+.||.+|||+.+|++.|+.+.
T Consensus 263 ~-----~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 263 R-----QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp T-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred C-----CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1 112345678899999999999999999999999999998763
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-58 Score=432.56 Aligned_cols=254 Identities=22% Similarity=0.292 Sum_probs=211.3
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.++.+.++||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++++|..++..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45677789999999999999853 478999999986654456789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEE
Q 012608 100 VAEYMPNETLAKHLFHWE-------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRL 166 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~-------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl 166 (460)
|||||+||+|.+++.... .+++++..++.|+.||+.||.|||+++ ||||||||+|||+++++.+||
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHRDLKp~NILl~~~~~~Ki 199 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATRNCLVGQGLVVKI 199 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecccccHhhEEECCCCcEEE
Confidence 999999999999987532 246899999999999999999999999 999999999999999999999
Q ss_pred ccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccc
Q 012608 167 STFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTD 239 (460)
Q Consensus 167 ~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 239 (460)
+|||+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||...............
T Consensus 200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g--- 276 (329)
T 4aoj_A 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG--- 276 (329)
T ss_dssp CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT---
T ss_pred cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC---
Confidence 999999865332 34568999999999999999999999999999999999 89998765443332221111
Q ss_pred ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.....|..+++++.+|+.+||+.||++|||+.+|++.|+.+...
T Consensus 277 --~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 277 --RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred --CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 12234567889999999999999999999999999999988654
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-57 Score=473.78 Aligned_cols=404 Identities=18% Similarity=0.148 Sum_probs=303.2
Q ss_pred cccchhcccCCCCCCeEEEEEEc--CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCe-----e
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE--NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE-----R 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-----~ 97 (460)
..|++++.||+|+||+||++.+. +|+.||||++...... ....+.+|+.++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 56899999999999999999964 6899999998754322 24578899999999999999999999987665 6
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
|+||||++|++|.+++. ..+++..++.++.||+.||.|||+++ |+||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~g-iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSIG-LVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC-CeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999988763 37999999999999999999999999 9999999999999975 899999999998877
Q ss_pred CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 178 GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 178 ~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
.....||+.|+|||++.+.. +.++|||||||++|+|++|..|+...... .+. ........++.+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~--------~~~----~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD--------GLP----EDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS--------SCC----TTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc--------ccc----ccccccccCHHHHHH
Confidence 77788999999999987654 88999999999999999998776542111 000 001111345789999
Q ss_pred HHHHcccCCCCCC-ChhHHHHHhccccccC-----CCCcccccCCCCCCCCCCCCCCcCcCCccch--------------
Q 012608 258 ASRCLQYEPRERP-NPKSLVTALSPLQKET-----EVPSHVLMGIPHSASVSPLSPLGEACSRRDL-------------- 317 (460)
Q Consensus 258 i~~~l~~~p~~Rp-s~~~il~~L~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 317 (460)
|.+||+.||.+|| +++++...|..+.... ..|.+..+. ..+|.........+
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLST--------IFSPSRSTFGVDLLVAHTDVYLDGQVHA 372 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHHHHHHHHHHHSCCCCCCCS--------SBCCCSSCCSSSHHHHGGGHHHHCCCCC
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHHHHHhhccccCCCCCcccc--------cCCcccccccchhhhhhccccccccccc
Confidence 9999999999998 5666666666553321 111110000 00000000000000
Q ss_pred --hHHHHHHHhhh----------------ccCcchhhhhhchhhhh---------hhHHHHHHhHHhhhHHHhhCCHHHH
Q 012608 318 --TAIHEILEKIS----------------YKDDEGVANELSFQMWT---------DQMQETLNSKKKGDVAFRQKDLKDA 370 (460)
Q Consensus 318 --~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~A 370 (460)
....++...+. ............++... ....++..+..+|..+++.|+|++|
T Consensus 373 ~~~~~~~~~~~L~~p~~~p~~~~a~~~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A 452 (681)
T 2pzi_A 373 EKLTANEIVTALSVPLVDPTDVAASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKA 452 (681)
T ss_dssp CCCCHHHHHHHSCCBCCCTTSTTHHHHHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHH
T ss_pred ccCCHHHHHhhCCCccCCCCCcchHHhhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHH
Confidence 00011111110 00000000111111111 1123467889999999999999999
Q ss_pred HHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhh
Q 012608 371 IECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 450 (460)
Q Consensus 371 ~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 450 (460)
++.|+++++++|+ +..+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.++..+|++++ +++|++|++++
T Consensus 453 ~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~ 530 (681)
T 2pzi_A 453 TRKLDDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTN 530 (681)
T ss_dssp HHHHHHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC
T ss_pred HHHHHHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhC
Confidence 9999999999999 899999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred hhcccccC
Q 012608 451 AKKNSTAG 458 (460)
Q Consensus 451 ~~~~~a~~ 458 (460)
|++..++.
T Consensus 531 P~~~~a~~ 538 (681)
T 2pzi_A 531 DGVISAAF 538 (681)
T ss_dssp TTCHHHHH
T ss_pred CchHHHHH
Confidence 99887653
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-57 Score=436.45 Aligned_cols=251 Identities=19% Similarity=0.256 Sum_probs=216.7
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..|+++++||+|+||.||+|+. .+|+.||||++........+.+.+|+.+|++++|||||++++++..++.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4589999999999999999995 569999999998776666788999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
+||+|.+++. .+.+++..+..|+.||+.||+|||++| ||||||||+|||++.+|.+||+|||+++..... .+
T Consensus 231 ~gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~-IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 231 EGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQG-VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp TTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCcHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 9999999985 356999999999999999999999999 999999999999999999999999999865432 45
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
.+||+.|||||++.+..|+.++|||||||++|||++|+.||.+............... .....+..+++++.+||.+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSCTTSSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCcccccCCHHHHHHHHH
Confidence 6899999999999999999999999999999999999999977544333222221111 1122345678999999999
Q ss_pred HcccCCCCCCChhHHHHHhcccccc
Q 012608 261 CLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
||+.||.+|||+.++++ .++...
T Consensus 384 ~L~~dP~~R~ta~ell~--Hp~~~~ 406 (423)
T 4fie_A 384 LLVRDPAQRATAAELLK--HPFLAK 406 (423)
T ss_dssp HSCSSTTTSCCHHHHTT--CGGGGG
T ss_pred HcCCChhHCcCHHHHhc--CHHhcC
Confidence 99999999999999987 445443
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-57 Score=426.55 Aligned_cols=251 Identities=17% Similarity=0.135 Sum_probs=212.6
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.+..|++.++||+|+||+||+|+. .+|+.||||+++.... ..+|+.++++++|||||++++++..++.+|||||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 455688889999999999999995 5699999999976442 2479999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-CeEEccCCCcccCCCC---
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~DFg~a~~~~~~--- 178 (460)
||+||+|.+++.. .+.+++..+..++.||+.||+|||+++ ||||||||+|||++.+| .+||+|||+|+.....
T Consensus 131 y~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred ccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999999974 457999999999999999999999999 99999999999999887 6999999999865432
Q ss_pred ------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 ------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....||+.|||||++.+..++.++|||||||++|||+||+.||.......+....... ......+++.+++
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~---~~~~~~~~~~~s~ 284 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE---PPPIREIPPSCAP 284 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS---CCGGGGSCTTSCH
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC---CCCchhcCccCCH
Confidence 2357999999999999999999999999999999999999999765433222222111 1112245677889
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
++.++|.+||+.||.+|||+.|+++.|......
T Consensus 285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 999999999999999999999999988766544
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-57 Score=424.57 Aligned_cols=244 Identities=17% Similarity=0.186 Sum_probs=213.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
..++|++++.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+++|++++|||||++++++..++.+|+
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 345799999999999999999994 57999999999643 23346789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC--
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~-- 177 (460)
|||||+||+|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 110 vmEy~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999999974 467999999999999999999999999 99999999999999999999999999986542
Q ss_pred ----CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 178 ----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 178 ----~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
..+.+||+.|||||++.+..++.++|||||||++|+|+||..||.+.....+........ ..++..++++
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~------~~~p~~~s~~ 260 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE------YDFPEKFFPK 260 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC------CCCCTTCCHH
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC------CCCCcccCHH
Confidence 235689999999999999999999999999999999999999998765544433332211 1345677899
Q ss_pred HHHHHHHHcccCCCCCCChhHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLV 276 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il 276 (460)
+.+||.+||+.||++|||++|++
T Consensus 261 ~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 261 ARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHHHHccCCHhHCcChHHHc
Confidence 99999999999999999999864
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=411.66 Aligned_cols=243 Identities=20% Similarity=0.256 Sum_probs=198.1
Q ss_pred CcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC---CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW---PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
..+|++++.||+|+||+||+|. ..+|+.||||+++.... ...+.+.+|+.++++++|||||++++++..++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4578999999999999999999 45799999999975432 2356799999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|||| +|+|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK-IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 9999 5799998874 467999999999999999999999999 999999999999999999999999999865433
Q ss_pred -CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
.+..||+.|||||++.+..+ +.++||||+||++|+|+||+.||.......+........ ..++..+++++.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV------YTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC------CCCCTTSCHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHH
Confidence 45689999999999998776 579999999999999999999998765544333222111 1345667899999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
||.+||+.||++|||++++++
T Consensus 242 li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHccCChhHCcCHHHHHc
Confidence 999999999999999999998
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-56 Score=412.26 Aligned_cols=243 Identities=19% Similarity=0.248 Sum_probs=200.4
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEee----CCeeEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLV 100 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv 100 (460)
+++..+||+|+||+||+|.. .+++.||+|++...... ..+.|.+|+.++++|+|||||++++++.. ++.+|||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 46677899999999999995 46999999999654332 25679999999999999999999999865 3458999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEc-CCCCeEEccCCCcccCCCC
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~-~~~~~kl~DFg~a~~~~~~ 178 (460)
||||+||+|.+++.. .+.+++..+..|+.||+.||+|||+++ +||||||||+|||++ .++.+||+|||+|+.....
T Consensus 108 mEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 108 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 999999999999974 467999999999999999999999986 499999999999997 4799999999999865433
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh-hhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
.+..||+.|||||++. +.++.++|||||||++|||+||+.||..... ..+........ .+..++...++++.
T Consensus 186 ~~~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~ 260 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV----KPASFDKVAIPEVK 260 (290)
T ss_dssp SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC----CCGGGGGCCCHHHH
T ss_pred ccCCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCC----CCCCCCccCCHHHH
Confidence 4567999999999986 4699999999999999999999999865322 22211111111 11223445668899
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+||.+||+.||++|||++++++
T Consensus 261 ~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHccCChhHCcCHHHHhc
Confidence 9999999999999999999987
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-56 Score=417.59 Aligned_cols=244 Identities=19% Similarity=0.213 Sum_probs=203.4
Q ss_pred CcccchhcccCCCCCCeEEEEEEc----CCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
-++|++++.||+|+||+||+|+.. +++.||||+++..... ....+.+|+++|++++|||||++++++..++.+|
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 367999999999999999999852 4789999999654321 2346889999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 177 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~- 177 (460)
+|||||+||+|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||++.+|.+||+|||+|+....
T Consensus 103 ivmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~-IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG-IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EEECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999999974 467999999999999999999999999 99999999999999999999999999986432
Q ss_pred ---CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 178 ---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 178 ---~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
..+..||+.|||||++.+..++.++|||||||++|||+||+.||.+.....+....... ...+|..+++++
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 253 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA------KLGMPQFLSPEA 253 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCcCCHHH
Confidence 34568999999999999999999999999999999999999999876554443332221 113456788999
Q ss_pred HHHHHHHcccCCCCCCCh-----hHHHH
Q 012608 255 VRLASRCLQYEPRERPNP-----KSLVT 277 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~-----~~il~ 277 (460)
.+||.+||+.||++|||+ +++++
T Consensus 254 ~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 254 QSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp HHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred HHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 999999999999999985 56665
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-55 Score=415.64 Aligned_cols=256 Identities=22% Similarity=0.283 Sum_probs=211.5
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcC------CcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCC-CccceeeeEEeeC-
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRN-NRLTNLLGCCCEG- 94 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~- 94 (460)
..++++++++||+|+||+||+|.+.. ++.||||.++...... .+.|.+|+.+|.++.| ||||+++|+|...
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 34678999999999999999998432 3689999997654332 5679999999999955 9999999999764
Q ss_pred CeeEEEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC
Q 012608 95 DERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~ 160 (460)
+.+++|||||+||+|.++++... ...+++..+..++.||+.||+|||+++ ||||||||+|||+++
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~-iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSE 220 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECG
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC-eecCccCccceeeCC
Confidence 56899999999999999996432 245899999999999999999999999 999999999999999
Q ss_pred CCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcc
Q 012608 161 DGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 233 (460)
Q Consensus 161 ~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 233 (460)
++.+||+|||+|+..... ....||+.|||||++.+..++.++|||||||++|||+| |..||.+..........
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~ 300 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 300 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 999999999999865433 23457899999999999999999999999999999998 89898764322111111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
. ........|..+++++.+++.+||+.||.+|||+.++++.|+.+.+
T Consensus 301 i----~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 301 L----KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp H----HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H----HcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 1 1111223456678999999999999999999999999999987754
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-53 Score=399.26 Aligned_cols=244 Identities=17% Similarity=0.246 Sum_probs=189.0
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCC--------
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-------- 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 95 (460)
.+|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.+|++|+|||||++++++...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 3688999999999999999995 56999999999755432 2467899999999999999999999987554
Q ss_pred ----eeEEEEEcCCCCCHHhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCC
Q 012608 96 ----ERLLVAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 170 (460)
Q Consensus 96 ----~~~lv~e~~~g~sL~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg 170 (460)
.+|+|||||+||+|.+++..... ...++..++.|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~-IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc-CccccCcHHHeEECCCCcEEEccCc
Confidence 36899999999999999974322 23456678899999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC----------------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc
Q 012608 171 LMKNSRDG----------------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 171 ~a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 234 (460)
+|+..... ....||+.|||||++.+..++.++|||||||++|||++ ||.............
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~ 240 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDV 240 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHH
Confidence 99865432 23469999999999999999999999999999999997 665442211110000
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. .... +......++.+.+||.+||+.||.+|||+.++++
T Consensus 241 ~---~~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 241 R---NLKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp H---TTCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred h---cCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 0000 0011234466788999999999999999999987
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-54 Score=403.68 Aligned_cols=252 Identities=16% Similarity=0.211 Sum_probs=195.4
Q ss_pred ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHH--HHHHHHHhcCCCCccceeeeEEeeCC----eeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQF--LEEARSVGQLRNNRLTNLLGCCCEGD----ERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 100 (460)
++.+.++||+|+||+||+|++ +|+.||||+++... .+.+ ..|+..+.+++|||||++++++..++ .+|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 466778999999999999998 68999999996532 3333 34566667889999999999998654 57999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccCCcEEEcCCCCeEEccCCCc
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGLM 172 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~~iiH~Dikp~Nill~~~~~~kl~DFg~a 172 (460)
||||+||+|.+++.. .++++..+.+++.|++.||+|||++ + ||||||||+|||++.++.+||+|||++
T Consensus 80 ~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~-IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred ecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-EeeccCCcccEEECCCCCEEEEeCCCC
Confidence 999999999999963 5699999999999999999999987 6 999999999999999999999999999
Q ss_pred ccCCCC--------CCccCCCcccCccccccC------CCCCCCceehHHHHHHHHhhCCCCCCChhh------------
Q 012608 173 KNSRDG--------KSYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSGKHIPPSHAL------------ 226 (460)
Q Consensus 173 ~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDi~slG~~l~el~tg~~p~~~~~~------------ 226 (460)
+..... ....||+.|||||++.+. .++.++|||||||++|||+||..|+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 765432 234689999999998754 367899999999999999999866532111
Q ss_pred ---hhhhhcccccccccccc-CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 227 ---DLIRDRNLQMLTDSCLE-GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 227 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
..+.........++..+ .......+..+.+|+.+||+.||++|||+.++++.|+.+..+.
T Consensus 236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 00110001111111111 1112345678999999999999999999999999999886543
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=400.54 Aligned_cols=254 Identities=15% Similarity=0.254 Sum_probs=205.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeC------Ce
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 96 (460)
++|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+++|++|+|||||++++++... +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 3699999999999999999995 57999999999765432 246788999999999999999999997643 56
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
+|||||||+ |+|.+++. ..+.+++..+..++.||+.||.|||++| ||||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ-VIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc-CcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999996 67999886 4568999999999999999999999999 9999999999999999999999999998653
Q ss_pred C--------CCCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccc-------
Q 012608 177 D--------GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS------- 240 (460)
Q Consensus 177 ~--------~~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~------- 240 (460)
. ..+..||+.|||||++.+.. ++.++||||+||++|||++|+.||.+................+
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 2 24568999999999988754 6899999999999999999999998764332221111000000
Q ss_pred ------------------cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 241 ------------------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 241 ------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.......+.+++++.+||.+||+.||.+|||+.++++ .++...
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~--Hp~f~~ 350 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR--HPFLAK 350 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT--SGGGTT
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc--CHhhCc
Confidence 0000112345788999999999999999999999988 455544
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=388.30 Aligned_cols=243 Identities=19% Similarity=0.269 Sum_probs=196.5
Q ss_pred ccchhcccCCCCCCeEEEEEEc----CCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.|+++++||+|+||+||+|+.. +++.||||++.... ...++.+|+++|+.+ +||||+++++++..++.+|+||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4899999999999999999842 47899999986543 466789999999999 7999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-CCeEEccCCCcccCCCC--
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~DFg~a~~~~~~-- 178 (460)
|||+|++|.+++. .+++..+..++.||+.||+|||++| |+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 100 E~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g-IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 100 PYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG-IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp ECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred eCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC-eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999999883 4899999999999999999999999 9999999999999876 78999999999754321
Q ss_pred ------------------------------CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhh
Q 012608 179 ------------------------------KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALD 227 (460)
Q Consensus 179 ------------------------------~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~ 227 (460)
....||+.|||||++.+.. ++.++||||+||++|+|+||+.||.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~ 253 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCH
Confidence 2346899999999998754 899999999999999999999998543211
Q ss_pred hhh-hc-------------------cc-----------------------------cccccccccCCCCchhHHHHHHHH
Q 012608 228 LIR-DR-------------------NL-----------------------------QMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 228 ~~~-~~-------------------~~-----------------------------~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
... .. .. ...............+++++.+||
T Consensus 254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl 333 (361)
T 4f9c_A 254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL 333 (361)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence 000 00 00 000000001112345678899999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||+.||++|||++|+++
T Consensus 334 ~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 334 DKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHTCSCTTTSCCHHHHHT
T ss_pred HHHCcCChhHCcCHHHHhc
Confidence 9999999999999999987
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-50 Score=409.06 Aligned_cols=248 Identities=18% Similarity=0.155 Sum_probs=213.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
++|++++.||+|+||+||++.. .+|+.||+|++......+.+.+.+|+.+|+.|+|||||++++++..++.+|||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 4689999999999999999995 569999999997765545678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC--CCeEEccCCCcccCCCCC---
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED--GNPRLSTFGLMKNSRDGK--- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~--~~~kl~DFg~a~~~~~~~--- 179 (460)
+||+|.+++.. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999998864 3457999999999999999999999999 9999999999999854 899999999998765543
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...||+.|||||++.+..++.++|||||||++|+|++|..||.+............... .........+++++.+||.
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~dli~ 392 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIR 392 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCSGGGTTSCHHHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHH
Confidence 45799999999999999999999999999999999999999987655443332221111 1112233457789999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.||.+|||+.++++
T Consensus 393 ~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TTSCSSGGGSCCHHHHHH
T ss_pred HHccCChhHCcCHHHHhc
Confidence 999999999999999998
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-50 Score=404.80 Aligned_cols=249 Identities=18% Similarity=0.162 Sum_probs=205.5
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHH---HHHHHhcCCCCccceeeeEEeeCC
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLE---EARSVGQLRNNRLTNLLGCCCEGD 95 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~ 95 (460)
-+.++|++++.||+|+||.||+|+. .+|+.||||+++... ........+ ++.+++.++|||||++++++...+
T Consensus 186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~ 265 (689)
T 3v5w_A 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 265 (689)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence 3567899999999999999999994 569999999996421 122333334 467778889999999999999999
Q ss_pred eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
.+|+|||||+||+|.+++.. .+.+++..+..++.||+.||.|||++| ||||||||+|||++.+|.+||+|||+|+..
T Consensus 266 ~lylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g-IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 266 KLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999999974 467999999999999999999999999 999999999999999999999999999876
Q ss_pred CCC--CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 176 RDG--KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 176 ~~~--~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
... .+.+||+.|||||++.. ..++.++|+|||||++|||++|..||.+........ ...... .....++..+++
T Consensus 343 ~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~--~~~~~~p~~~S~ 419 (689)
T 3v5w_A 343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTL--TMAVELPDSFSP 419 (689)
T ss_dssp SSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHH--HCCCCCCTTSCH
T ss_pred CCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhc--CCCCCCCccCCH
Confidence 543 46789999999999974 569999999999999999999999997643221111 000000 112245667889
Q ss_pred HHHHHHHHHcccCCCCCCC-----hhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps-----~~~il~ 277 (460)
++.+||.+||+.||.+|++ +++|++
T Consensus 420 ~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 420 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred HHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 9999999999999999998 577765
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-47 Score=360.93 Aligned_cols=266 Identities=19% Similarity=0.221 Sum_probs=220.1
Q ss_pred CCCCCccccCHHHHHHHhcCCcc-------cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHH
Q 012608 5 DGLPSFREFTLEQLKNATSGFAV-------ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSV 76 (460)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~f~~-------~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l 76 (460)
+.....+.|+++++..++.+... +...+.||+|+||.||+|... +|+.||||++........+.+.+|+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l 96 (321)
T 2c30_A 17 NLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIM 96 (321)
T ss_dssp --------CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHH
T ss_pred ceeecCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHH
Confidence 44555678999999999976433 556678999999999999965 7999999999877666778899999999
Q ss_pred hcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcE
Q 012608 77 GQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156 (460)
Q Consensus 77 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Ni 156 (460)
++++||||+++++++..++..++||||++|++|.+++. ...+++..+..++.|++.||.|||+++ |+||||||+||
T Consensus 97 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NI 172 (321)
T 2c30_A 97 RDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQG-VIHRDIKSDSI 172 (321)
T ss_dssp TTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGE
T ss_pred HhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHE
Confidence 99999999999999999999999999999999999884 457999999999999999999999999 99999999999
Q ss_pred EEcCCCCeEEccCCCcccCCCC----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc
Q 012608 157 LFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 232 (460)
Q Consensus 157 ll~~~~~~kl~DFg~a~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~ 232 (460)
|++.++.+||+|||++...... ....||+.|+|||.+.+..++.++||||||+++|+|++|..||...........
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~ 252 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR 252 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999999999999998765432 345789999999999988899999999999999999999999876533222211
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 233 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...... ........+++.+.+++.+||+.||.+|||+.++++
T Consensus 253 ~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 253 LRDSPP---PKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHHSSC---CCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhcCCC---CCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111110 111123356789999999999999999999999998
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=362.70 Aligned_cols=246 Identities=20% Similarity=0.294 Sum_probs=212.0
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
..+..|++++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 4456799999999999999999995 67999999999764332 24678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||++|++|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 92 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR-IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp EECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EEECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 9999999999999864 356999999999999999999999999 999999999999999999999999999765433
Q ss_pred --CCccCCCcccCccccccCCCC-CCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVT-PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~-~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....||+.|+|||.+.+..++ .++|||||||++|+|++|+.||.+............. ....+..+++++.
T Consensus 169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 242 (328)
T 3fe3_A 169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG------KYRIPFYMSTDCE 242 (328)
T ss_dssp GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHH
Confidence 356789999999999887764 7999999999999999999999876554443332221 1123455778999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||++++++
T Consensus 243 ~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 243 NLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHHHHHCCSSTTTSCCHHHHTT
T ss_pred HHHHHHCCCChhHCcCHHHHhc
Confidence 9999999999999999999988
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-47 Score=359.06 Aligned_cols=246 Identities=20% Similarity=0.267 Sum_probs=211.2
Q ss_pred CcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
...|++++.||+|+||+||+|. ..+|+.||||++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 3568999999999999999999 457999999999876666778899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
++|++|.+++.. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... .
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 999999999863 46899999999999999999999999 999999999999999999999999998765433 3
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...||+.|+|||.+.+..++.++|||||||++|+|++|..||.............. ........+..+++.+.+++.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---HCSCCCSCGGGSCHHHHHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCCCCCccccCHHHHHHHH
Confidence 45789999999999988999999999999999999999999865433221111100 111112234567789999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.||.+|||+.++++
T Consensus 252 ~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHSCSSTTTSCCHHHHTT
T ss_pred HHccCChhHCcCHHHHhh
Confidence 999999999999999987
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-47 Score=362.25 Aligned_cols=257 Identities=19% Similarity=0.262 Sum_probs=215.8
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.++|.+.+.||+|+||+||++.. .+|+.||+|++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 45788999999999999999995 46999999998765544567899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
++|++|.+++.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 89 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 89 IKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSMN-IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp CTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred cCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999975 3467999999999999999999999999 9999999999999999999999999987653321
Q ss_pred --------------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCC
Q 012608 180 --------------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245 (460)
Q Consensus 180 --------------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (460)
...||+.|+|||++.+..++.++||||||+++|+|++|..|+.......... ...........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~---~~~~~~~~~~~ 243 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF---GLNVRGFLDRY 243 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS---SBCHHHHHHHT
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH---hhhhhcccccc
Confidence 4568999999999998889999999999999999999998875432211110 00111111223
Q ss_pred CCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.+..+++.+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 244 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 244 CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 34566778999999999999999999999999999887643
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-47 Score=358.23 Aligned_cols=262 Identities=19% Similarity=0.293 Sum_probs=210.7
Q ss_pred hcCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.-.+.+|++++.||+|+||+||+|.. +|+.||||++....... .+.+.+|+.++++++||||+++++++...+..++
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 35567899999999999999999987 68899999987654332 4578999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 100 VAEYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
||||++|++|.+++..... ..+++..++.++.|++.||.|||+++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 9999999999999974221 23899999999999999999999986 499999999999999999999999999875443
Q ss_pred C----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 178 G----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 178 ~----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
. ....||+.|+|||++.+..++.++|||||||++|+|++|..||.............. .......+..+++.
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 267 (309)
T 3p86_A 192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF----KCKRLEIPRNLNPQ 267 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH----SCCCCCCCTTSCHH
T ss_pred cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh----cCCCCCCCccCCHH
Confidence 2 345789999999999988899999999999999999999999876543322221111 11122455677889
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
+.+++.+||+.||.+|||+.++++.|+.+.....+
T Consensus 268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999876543
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=359.17 Aligned_cols=270 Identities=26% Similarity=0.429 Sum_probs=223.1
Q ss_pred ccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEE
Q 012608 12 EFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC 91 (460)
Q Consensus 12 ~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 91 (460)
++++.++...++ .|++.+.||+|+||.||+|...+|+.||||++........+.+.+|+.++++++||||+++++++
T Consensus 28 ~~~~~~~~~~~~---~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 104 (321)
T 2qkw_B 28 RVPLVDLEEATN---NFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104 (321)
T ss_dssp --CCSCCCCCCC---CCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred eecHHHHHHHHh---ccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 455555554444 45677888999999999999878999999998876655678899999999999999999999999
Q ss_pred eeCCeeEEEEEcCCCCCHHhhhhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccC
Q 012608 92 CEGDERLLVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 169 (460)
Q Consensus 92 ~~~~~~~lv~e~~~g~sL~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DF 169 (460)
..++..++||||++|++|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+||
T Consensus 105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA-IIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCSTTEEECTTCCEEECCC
T ss_pred cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC-eecCCCCHHHEEECCCCCEEEeec
Confidence 99999999999999999999986432 235899999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh-----------hhhc
Q 012608 170 GLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----------IRDR 232 (460)
Q Consensus 170 g~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~-----------~~~~ 232 (460)
|++...... ....||+.|+|||.+.+..++.++|||||||++|+|+||+.||....... ....
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 998754322 23457899999999988889999999999999999999999886532211 1111
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 233 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
......++......+...+..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 22233333444456677889999999999999999999999999999877643
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-47 Score=360.27 Aligned_cols=274 Identities=29% Similarity=0.484 Sum_probs=226.0
Q ss_pred CCCCccccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCcc
Q 012608 6 GLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRL 84 (460)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~i 84 (460)
....++.|++.++...+++| ++.+.||+|+||.||+|...+|+.||||+++..... ....+.+|+.++++++||||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y---~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i 89 (326)
T 3uim_A 13 HLGQLKRFSLRELQVASDNF---SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 89 (326)
T ss_dssp --CCCEECCTHHHHTTTTSS---CSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTB
T ss_pred ccCccceecHHHHHHHhhcc---ccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCc
Confidence 34567889999998877765 566777999999999999878999999999765432 24479999999999999999
Q ss_pred ceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcccccccCCcEEEc
Q 012608 85 TNLLGCCCEGDERLLVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSK---GRALYHDLNAYRILFD 159 (460)
Q Consensus 85 v~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~~iiH~Dikp~Nill~ 159 (460)
+++++++..++..++||||++|++|.+++.... ...+++..+..++.|++.||.|||++ + |+||||||+|||++
T Consensus 90 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~-ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK-IIHRDVKAANILLD 168 (326)
T ss_dssp CCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC-EECCCCSGGGEEEC
T ss_pred cceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeCCCchhhEEEC
Confidence 999999999999999999999999999997543 23589999999999999999999999 8 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCC-----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh-------
Q 012608 160 EDGNPRLSTFGLMKNSRDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD------- 227 (460)
Q Consensus 160 ~~~~~kl~DFg~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~------- 227 (460)
.++.+||+|||++...... ....||+.|+|||.+.+..++.++|||||||++|+|+||..||......
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 248 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence 9999999999999865432 2345899999999998888999999999999999999999998532111
Q ss_pred ------hhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 228 ------LIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 228 ------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
...........+.......+...+..+.+++.+||+.||.+|||+.++++.|+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp HHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 01112223333334444566677899999999999999999999999999998653
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=359.19 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=211.2
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
+..+|++++.||+|+||.||+++. .+|+.||+|+++.. .......+.+|+.+++.++||||+++++++...+..++
T Consensus 3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 456899999999999999999995 46999999999653 23346789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC--
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~-- 177 (460)
||||++|++|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 83 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 83 VMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999998864 457899999999999999999999999 99999999999999999999999999875332
Q ss_pred --CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 178 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 178 --~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..+++++.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 233 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAK 233 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHH
Confidence 24567899999999999888999999999999999999999999765444333222111 1234556789999
Q ss_pred HHHHHHcccCCCCCC-----ChhHHHH
Q 012608 256 RLASRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rp-----s~~~il~ 277 (460)
++|.+||+.||.+|| ++.++++
T Consensus 234 ~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 234 SLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 999999999999999 8899887
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=353.49 Aligned_cols=257 Identities=18% Similarity=0.226 Sum_probs=212.9
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
..|++++.||+|+||.||++.. .+++.||+|++....... .+.+.+|+.++++++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4689999999999999999995 469999999986554333 457899999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++|++|.+++.. .+++++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 91 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 99999999999874 357999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....||+.|+|||.+.+..++.++||||||+++|+|+||+.||.................. ......+..+++.+.+
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 246 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVP-NVTTDVRKDIPQSLSN 246 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCC-CHHHHSCTTSCHHHHH
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCC-CcchhcccCCCHHHHH
Confidence 2356899999999999888999999999999999999999999776543322222111111 1112334567789999
Q ss_pred HHHHHcccCCCCCC-ChhHHHHHhccccccC
Q 012608 257 LASRCLQYEPRERP-NPKSLVTALSPLQKET 286 (460)
Q Consensus 257 li~~~l~~~p~~Rp-s~~~il~~L~~~~~~~ 286 (460)
++.+||+.||.+|| +++++.+.|+.+....
T Consensus 247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 247 VILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred HHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 99999999999998 9999999998886554
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=360.57 Aligned_cols=246 Identities=17% Similarity=0.174 Sum_probs=208.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC------CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.|++++.||+|+||.||++.. .+|+.||+|+++..... ..+.+.+|+.++++++||||+++++++..++..++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 489999999999999999995 46999999999765432 25789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC----CeEEccCCCcccC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 175 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~DFg~a~~~ 175 (460)
||||++|++|.+++. ..+.+++..+..++.||+.||.|||++| |+||||||+|||++.++ .+||+|||++...
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp EEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 999999999999996 3567999999999999999999999999 99999999999998776 7999999999876
Q ss_pred CCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 176 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 176 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+............... ......+..+++
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~ 247 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY--DFDEEFFSQTSE 247 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTSCH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--CCCchhccCCCH
Confidence 543 456789999999999988899999999999999999999999977644433222211111 011112235678
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+.+||.+||..||.+|||+.++++
T Consensus 248 ~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 248 LAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 8999999999999999999999987
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=347.24 Aligned_cols=253 Identities=22% Similarity=0.308 Sum_probs=216.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+.++|++++.||+|+||.||++...+++.||+|++..... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 3467999999999999999999988899999999976542 457899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----- 178 (460)
++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 87 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 87 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp CTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC-eecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 999999999864 3456899999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....+|+.|+|||.+.+..++.++||||||+++|+|++ |..||............... .....+...++.+.++
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 239 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQI 239 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHH
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----ccCCCCCcCCHHHHHH
Confidence 34456778999999998889999999999999999999 88888765444333222211 1122344567899999
Q ss_pred HHHHcccCCCCCCChhHHHHHhccccc
Q 012608 258 ASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+.+||+.||.+|||+.++++.|+.+..
T Consensus 240 i~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 240 MNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 999999999999999999999988754
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=362.73 Aligned_cols=254 Identities=21% Similarity=0.298 Sum_probs=212.2
Q ss_pred CcccchhcccCCCCCCeEEEEEE--------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL--------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG 94 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 94 (460)
..+|++++.||+|+||.||+|.. .++..||||+++..... ..+.+.+|+.+++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35788999999999999999984 23567999999765322 246799999999999 899999999999999
Q ss_pred CeeEEEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC
Q 012608 95 DERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~ 160 (460)
+..++||||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTE 238 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeccccchhhEEECC
Confidence 99999999999999999997532 235789999999999999999999999 999999999999999
Q ss_pred CCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcc
Q 012608 161 DGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 233 (460)
Q Consensus 161 ~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 233 (460)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..||............
T Consensus 239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~ 318 (370)
T 2psq_A 239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 318 (370)
T ss_dssp TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 999999999999865432 23345788999999998889999999999999999999 88888765433222211
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
... .....+..++.++.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 319 ~~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 319 KEG-----HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp HTT-----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcC-----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111 1223455677899999999999999999999999999988754
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=358.04 Aligned_cols=267 Identities=21% Similarity=0.282 Sum_probs=211.9
Q ss_pred cCHHHHHHHhcCC------cccchhcccCCCCCCeEEEEEEc----CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCC
Q 012608 13 FTLEQLKNATSGF------AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRN 81 (460)
Q Consensus 13 ~~~~~~~~~~~~f------~~~~i~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h 81 (460)
.++.+...++.+| ..|++++.||+|+||.||+|... .+..||||+++..... ..+.+.+|+.++++++|
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h 109 (325)
T 3kul_A 30 HTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109 (325)
T ss_dssp -------------CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCC
T ss_pred ccccCccccchhhccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 3455666665555 46889999999999999999963 3456999999765322 24679999999999999
Q ss_pred CccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC
Q 012608 82 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161 (460)
Q Consensus 82 ~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~ 161 (460)
|||+++++++..++..++||||++|++|.+++.. ..+.+++..++.++.|++.||.|||+.+ |+||||||+|||++.+
T Consensus 110 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~ 187 (325)
T 3kul_A 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDLG-YVHRDLAARNVLVDSN 187 (325)
T ss_dssp TTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTT
T ss_pred CCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEECCC
Confidence 9999999999999999999999999999999864 3457999999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCCC-------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcc
Q 012608 162 GNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 233 (460)
Q Consensus 162 ~~~kl~DFg~a~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 233 (460)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||............
T Consensus 188 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~ 267 (325)
T 3kul_A 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267 (325)
T ss_dssp CCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH
T ss_pred CCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 999999999998664331 2234678999999998889999999999999999999 99888665443332222
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
... .....+..+++.+.+++.+||..||.+|||+.++++.|+.+....
T Consensus 268 ~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 268 EEG-----YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HcC-----CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 111 112234567789999999999999999999999999999987653
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-46 Score=352.59 Aligned_cols=245 Identities=18% Similarity=0.230 Sum_probs=211.6
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
+..+|++++.||+|+||.||+++. .+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 457799999999999999999995 469999999986532 2346788899999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||++|++|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 84 IMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp EECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred EEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 9999999999999974 457999999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..+++++.+++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 234 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLL 234 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHH
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHH
Confidence 4567899999999999888999999999999999999999999765443332222211 1134556778999999
Q ss_pred HHHcccCCCCCC-----ChhHHHH
Q 012608 259 SRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rp-----s~~~il~ 277 (460)
.+||+.||.+|| +++++++
T Consensus 235 ~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 235 SRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHhccCHHHcCCCcCCCHHHHhc
Confidence 999999999999 8888886
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=345.65 Aligned_cols=253 Identities=21% Similarity=0.302 Sum_probs=214.4
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
-.+|++++.||+|+||.||++...++..||+|+++.... ..+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 367899999999999999999988888999999976543 4578999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-----
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK----- 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~----- 179 (460)
+|++|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 163 (268)
T 3sxs_A 86 SNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ-FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163 (268)
T ss_dssp TTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred CCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence 999999998652 346899999999999999999999999 9999999999999999999999999987654432
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...+|+.|+|||.+.+..++.++||||||+++|+|+| |..||................ ....+...++.+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li 238 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH-----RLYRPHLASDTIYQIM 238 (268)
T ss_dssp SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-----CCCCCTTSCHHHHHHH
T ss_pred CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC-----CCCCCCcChHHHHHHH
Confidence 3345678999999998889999999999999999999 888886554333222211111 1122345668899999
Q ss_pred HHHcccCCCCCCChhHHHHHhcccccc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.+||+.||.+|||+.++++.|+.+...
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 239 YSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 999999999999999999999998754
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=355.65 Aligned_cols=247 Identities=19% Similarity=0.177 Sum_probs=203.0
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+.+|++++.||+|+||+||+|... +|+.||||++...... ..+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999954 7999999998654432 24678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----- 177 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----- 177 (460)
|++|++|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999986 3457999999999999999999999999 99999999999999999999999999975432
Q ss_pred -CCCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 178 -GKSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 178 -~~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
.....||+.|+|||++.+..+ +.++|||||||++|+|++|..||.............. ...........+++.+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK---EKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH---TTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh---cccccCCccccCCHHHH
Confidence 235678999999999987765 7799999999999999999999865432111100000 00011111245678999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||+.++++
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHccCChhhCcCHHHHhh
Confidence 9999999999999999999987
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=348.75 Aligned_cols=271 Identities=29% Similarity=0.475 Sum_probs=223.0
Q ss_pred CccccCHHHHHHHhcCCcccch---hcccCCCCCCeEEEEEEcCCcEEEEEEecCCCC----CCHHHHHHHHHHHhcCCC
Q 012608 9 SFREFTLEQLKNATSGFAVENI---VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQLRN 81 (460)
Q Consensus 9 ~~~~~~~~~~~~~~~~f~~~~i---~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h 81 (460)
.+..|++.++.+++++|+...+ .+.||+|+||.||+|.. +++.||||++..... ...+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 3678999999999999987533 37889999999999986 688999999875431 225679999999999999
Q ss_pred CccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC
Q 012608 82 NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160 (460)
Q Consensus 82 ~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~ 160 (460)
|||+++++++..++..++||||++|++|.+++... ...++++..++.++.|++.||.|||+++ |+||||||+||+++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH-HIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC-eecCCCCHHHEEEcC
Confidence 99999999999999999999999999999988643 2356899999999999999999999999 999999999999999
Q ss_pred CCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh----
Q 012608 161 DGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---- 230 (460)
Q Consensus 161 ~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~---- 230 (460)
++.+||+|||++...... ....||+.|+|||.+.+ .++.++||||||+++|+|++|..||.........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999998765432 23568999999998864 5889999999999999999999888654221110
Q ss_pred hc------cccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 231 DR------NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 231 ~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
.. ......+. .....+...+..+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDK-KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHTTSCCHHHHSCS-SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhhccc-cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 00 00001111 112345567789999999999999999999999999998774
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=363.10 Aligned_cols=254 Identities=22% Similarity=0.287 Sum_probs=202.9
Q ss_pred cccchhcccCCCCCCeEEEEEEc----CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
..|++.+.||+|+||.||+|+.. ++..||||+++..... ..+.+.+|+.++++++||||+++++++..++..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 35888999999999999999854 5778999999765322 246799999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~- 179 (460)
|||++|++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 125 TEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG-YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 999999999999964 3457999999999999999999999999 9999999999999999999999999988654332
Q ss_pred ------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 180 ------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 180 ------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
...+++.|+|||.+.+..++.++|||||||++|||++ |..||............... .....+..++.
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~ 277 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-----YRLPPPMDCPA 277 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT-----EECCCCTTCBH
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCccccH
Confidence 1234678999999998889999999999999999998 99888655433322221111 11123446778
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 278 ~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999887653
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=352.70 Aligned_cols=246 Identities=16% Similarity=0.158 Sum_probs=207.3
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC------CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.|++.+.||+|+||.||++.. .+|+.||+|+++..... ..+.+.+|+.++++++||||+++++++..++..++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 588999999999999999995 46999999998754322 35789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC----CeEEccCCCcccC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 175 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~DFg~a~~~ 175 (460)
||||++|++|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||++...
T Consensus 92 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 92 ILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHCC-eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999999986 3467999999999999999999999999 99999999999998877 7999999999875
Q ss_pred CCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 176 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 176 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||................ ...........+.
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 246 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN--YEFEDEYFSNTSA 246 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTC--CCCCHHHHTTSCH
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcC--CCcCccccccCCH
Confidence 432 35578999999999998889999999999999999999999987654433222111110 0011111234568
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+.+++.+||+.||.+|||+.++++
T Consensus 247 ~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 247 LAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHhc
Confidence 8999999999999999999999998
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-46 Score=356.39 Aligned_cols=256 Identities=16% Similarity=0.143 Sum_probs=209.5
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..|++++.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.+++++ +||||+++++++..++..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 4688999999999999999994 679999999987543 234688999999999 999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC-----eEEccCCCcccCCCC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~-----~kl~DFg~a~~~~~~ 178 (460)
+ |++|.+++... .+.+++..++.++.|++.||.|||+++ |+||||||+|||++.++. +||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~-iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN-LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9 89999998753 567999999999999999999999999 999999999999998876 999999999865332
Q ss_pred -----------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh---hccccccccccccC
Q 012608 179 -----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---DRNLQMLTDSCLEG 244 (460)
Q Consensus 179 -----------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~ 244 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||......... ...... .......
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~-~~~~~~~ 242 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT-KRATPIE 242 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHH-HHHSCHH
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhh-hccCCHH
Confidence 3557899999999999988999999999999999999999998753211110 000000 0000011
Q ss_pred CCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
......+ ++.+++..||+.||.+||++.++++.|+.+......
T Consensus 243 ~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 243 VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 1122344 899999999999999999999999999888765443
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=360.43 Aligned_cols=246 Identities=20% Similarity=0.258 Sum_probs=206.7
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
-+..+|++++.||+|+||.||+++. .+|+.||||+++.. .....+.+.+|..+++.+ +||||+++++++...+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 4567899999999999999999995 46999999998653 223456788999999998 799999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
|+||||++|++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999999874 457999999999999999999999999 99999999999999999999999999885432
Q ss_pred ----CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 178 ----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 178 ----~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..++++
T Consensus 177 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~ 250 (353)
T 3txo_A 177 NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLHED 250 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHH
T ss_pred CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHH
Confidence 24567899999999999888999999999999999999999999876554433332221 11345567789
Q ss_pred HHHHHHHHcccCCCCCCCh------hHHHH
Q 012608 254 LVRLASRCLQYEPRERPNP------KSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~------~~il~ 277 (460)
+.++|.+||+.||.+||++ .++++
T Consensus 251 ~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 251 ATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 9999999999999999998 67775
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-46 Score=369.32 Aligned_cols=253 Identities=19% Similarity=0.293 Sum_probs=214.8
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
...+++.+.||+|+||.||+|...++..||||+++... ...+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 35678889999999999999998888999999997644 35788999999999999999999999986 66789999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~ 179 (460)
++|+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 343 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN-YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTC
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccC
Confidence 9999999997544447889999999999999999999999 999999999999999999999999999865432 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...+|+.|+|||++.+..++.++|||||||++|||+| |..||.+............. .....+..+++++.++|
T Consensus 344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 418 (454)
T 1qcf_A 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNIM 418 (454)
T ss_dssp SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-----CCCCCCTTSCHHHHHHH
T ss_pred CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHH
Confidence 3345788999999998889999999999999999999 99888765433322221111 11123456788999999
Q ss_pred HHHcccCCCCCCChhHHHHHhcccccc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.+||+.||.+|||+.++++.|+.+...
T Consensus 419 ~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999998754
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=349.77 Aligned_cols=250 Identities=21% Similarity=0.277 Sum_probs=201.9
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
..+|++++.||+|+||+||+|...+|+.||+|++....... ...+.+|+.++++++||||+++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46799999999999999999998889999999997554322 4678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++ ++|.+.+.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 100 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 176 (311)
T 3niz_A 100 FME-KDLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176 (311)
T ss_dssp CCS-EEHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CCC-CCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence 998 578887764 3456999999999999999999999999 999999999999999999999999999865422
Q ss_pred CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc-------------------
Q 012608 179 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------------- 238 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~------------------- 238 (460)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+...............
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 34467999999999876 4589999999999999999999999865433221111100000
Q ss_pred -----cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 -----DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 -----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.........+.+++++.+|+.+||+.||.+|||++++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000000112345678999999999999999999999998
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-46 Score=346.16 Aligned_cols=254 Identities=25% Similarity=0.344 Sum_probs=212.8
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+..+|++++.||+|+||+||++...++..||+|+++.... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3467899999999999999999988888999999976543 357899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----- 178 (460)
++|++|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 101 MANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp CTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred cCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 9999999998642 356999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||................ ....+...++.+.++
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l 253 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-----RLYRPHLASEKVYTI 253 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC-----CCCCCTTCCHHHHHH
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhccc-----CCCCCCcCCHHHHHH
Confidence 33456788999999998889999999999999999998 998887654333322222111 122344556899999
Q ss_pred HHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 258 ASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+.+||+.||.+|||+.++++.|..+..+
T Consensus 254 i~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 254 MYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 9999999999999999999999877643
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-46 Score=355.10 Aligned_cols=248 Identities=15% Similarity=0.192 Sum_probs=208.4
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+..|++++.||+|+||.||++.. .+|+.||+|.++... .....+.+|+.+++.++||||+++++++...+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 46789999999999999999995 468999999987542 2356788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC--CCCeEEccCCCcccCCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK-- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~--~~~~kl~DFg~a~~~~~~~-- 179 (460)
++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g-ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 999999999864 3357999999999999999999999999 999999999999986 7899999999998765443
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...+|+.|+|||++.+..++.++|||||||++|+|++|..||.................. ........++.++.+++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li 238 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTSCHHHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC--CChhhhccCCHHHHHHH
Confidence 346899999999999888899999999999999999999999776544332222111110 00111234678999999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||..||.+|||+.++++
T Consensus 239 ~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 239 DRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHcCCChhHCcCHHHHhc
Confidence 9999999999999999998
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=365.06 Aligned_cols=247 Identities=17% Similarity=0.191 Sum_probs=207.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
..|++++.||+|+||+||++.. .+|+.||+|++...... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 4688999999999999999984 57999999998765432 24578999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc---CCCCeEEccCCCcccCCCC-
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~---~~~~~kl~DFg~a~~~~~~- 178 (460)
|++|++|.+.+.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 91 ~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g-ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 91 LVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp CCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred eCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 9999999998874 457999999999999999999999999 99999999999998 5678999999999766543
Q ss_pred ---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.................. ........+++++.
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~ 245 (444)
T 3soa_A 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD--FPSPEWDTVTPEAK 245 (444)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHH
T ss_pred ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC--CCccccccCCHHHH
Confidence 3457899999999999888999999999999999999999999766544333222211111 11122345678999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+||.+||+.||.+|||+.++++
T Consensus 246 ~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 246 DLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHcCCChhHCCCHHHHhc
Confidence 9999999999999999999998
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=367.64 Aligned_cols=254 Identities=25% Similarity=0.350 Sum_probs=213.7
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCC-eeEEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-ERLLVA 101 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 101 (460)
-+...+++++.||+|+||.||+|.. .|+.||||+++... ..+.|.+|+.++++++||||+++++++...+ ..++||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 3557789999999999999999997 47899999998654 4678999999999999999999999987665 789999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-CC
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KS 180 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~ 180 (460)
||++|++|.+++.......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 345 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 345 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccC
Confidence 9999999999998655555899999999999999999999999 999999999999999999999999998865433 23
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..+++.|+|||.+.+..++.++|||||||++|||+| |..||............... .....+..+++.+.++|.
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~~li~ 420 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-----YKMDAPDGCPPAVYDVMK 420 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHH
Confidence 456889999999998899999999999999999998 99888654332222111111 122345677899999999
Q ss_pred HHcccCCCCCCChhHHHHHhcccccc
Q 012608 260 RCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+||+.||.+|||+.++++.|+.+...
T Consensus 421 ~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 421 NCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999887643
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=357.15 Aligned_cols=251 Identities=18% Similarity=0.133 Sum_probs=197.3
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
....+|++++.||+|+||+||++... +|+.||||++..... ..+.+.+|+.++++++||||+++++++..++..++||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 45678999999999999999999954 799999999976543 3467899999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC--eEEccCCCcccCCC--
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRD-- 177 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~--~kl~DFg~a~~~~~-- 177 (460)
||++|++|.+++.. .+.+++..++.++.|++.||.|||++| |+||||||+|||++.++. +||+|||+++....
T Consensus 96 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~-ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 96 EYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ-ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred EeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 99999999998864 456999999999999999999999999 999999999999987665 99999999874332
Q ss_pred -CCCccCCCcccCccccccCCCCCC-CceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 178 -GKSYSTNLAFTPPEYLRTGRVTPE-SVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 178 -~~~~~~t~~y~aPE~~~~~~~~~~-sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||............................+++++.
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 252 (361)
T 3uc3_A 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC 252 (361)
T ss_dssp --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHH
T ss_pred CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHH
Confidence 245678999999999988777655 999999999999999999987543211111111111111111111224678999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+||.+||+.||.+|||+.++++
T Consensus 253 ~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 253 HLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp HHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHccCChhHCcCHHHHHh
Confidence 9999999999999999999987
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=351.93 Aligned_cols=258 Identities=19% Similarity=0.295 Sum_probs=209.4
Q ss_pred cccchhcccCCCCCCeEEEEEE-----cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~ 98 (460)
..|++++.||+|+||+||++++ .+|+.||||++........+.+.+|+.++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5689999999999999999984 35899999999865544457899999999999999999999998543 5589
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++|++|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 90 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 999999999999999652 345899999999999999999999999 999999999999999999999999999865433
Q ss_pred -------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc-----------ccccccc
Q 012608 179 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------LQMLTDS 240 (460)
Q Consensus 179 -------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~~~~~~~ 240 (460)
....++..|+|||.+.+..++.++||||||+++|+|+||..|+............ .......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 2234567799999999889999999999999999999999887654332111100 0000011
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
......+..+++++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 112234556789999999999999999999999999999988654
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=344.87 Aligned_cols=250 Identities=18% Similarity=0.233 Sum_probs=202.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+.+|++++.||+|+||+||+|.. .+|+.||||+++...... ...+.+|+.++++++||||+++++++..++..++||
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 35789999999999999999995 469999999997654333 467899999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++| +|.+.+.. ..+.+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~-ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp ECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred ecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 99985 55555543 3567999999999999999999999999 999999999999999999999999999765432
Q ss_pred -CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCCh-hhhhhhhcccc--------------c-----
Q 012608 179 -KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQ--------------M----- 236 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~--------------~----- 236 (460)
....+|+.|+|||++.+.. ++.++|||||||++|+|++|..|+... ........... .
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 3456799999999998766 799999999999999999988875332 11111100000 0
Q ss_pred ----cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 ----LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 ----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...........+.+++.+.+++.+||+.||++|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00001111233457789999999999999999999999998
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=356.53 Aligned_cols=255 Identities=15% Similarity=0.217 Sum_probs=203.8
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCC----eeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD----ERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 100 (460)
..+|++++.||+|+||+||+|+.. |+.||||++.... .....+.+|+.++++++||||+++++++..+. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 367999999999999999999874 8999999986543 12345677999999999999999999998754 36999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CCcccccccCCcEEEcCCCCeEEccCC
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK----------GRALYHDLNAYRILFDEDGNPRLSTFG 170 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----------~~iiH~Dikp~Nill~~~~~~kl~DFg 170 (460)
|||++|++|.+++.. ..+++..++.++.|++.||.|||+. + |+||||||+|||++.++.+||+|||
T Consensus 101 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~-ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA-ISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE-EECSCCSGGGEEECTTCCEEECCCT
T ss_pred EecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC-EEeCCCChHhEEECCCCeEEEccCC
Confidence 999999999999963 4699999999999999999999999 8 9999999999999999999999999
Q ss_pred CcccCCCC------CCccCCCcccCccccccC-----CCCCCCceehHHHHHHHHhhCCCCCCChhhh------------
Q 012608 171 LMKNSRDG------KSYSTNLAFTPPEYLRTG-----RVTPESVIYSFGTLLLDLLSGKHIPPSHALD------------ 227 (460)
Q Consensus 171 ~a~~~~~~------~~~~~t~~y~aPE~~~~~-----~~~~~sDi~slG~~l~el~tg~~p~~~~~~~------------ 227 (460)
+++..... ....||+.|+|||++.+. .++.++|||||||++|+|+||+.||.+....
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 99754432 235689999999999763 4667899999999999999999888653211
Q ss_pred ----hhhhccccccccccccCC-CCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 228 ----LIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 228 ----~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.+..........+..... .....++++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 257 PSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 000000011111111111 1224567799999999999999999999999999987653
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=354.88 Aligned_cols=246 Identities=16% Similarity=0.180 Sum_probs=212.3
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
....+|++++.||+|+||.||+++. .+|+.||||+++... ....+.+.+|+.+++.++||||+++++++..++..+
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 117 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 3567899999999999999999995 469999999986432 234678999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++|++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 118 lv~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCccceEEECCCCCEEEcccccceeccCC
Confidence 99999999999999974 356999999999999999999999999 999999999999999999999999999876543
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..+++++.++
T Consensus 195 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~l 268 (350)
T 1rdq_E 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDL 268 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHH
T ss_pred cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHH
Confidence 4567899999999999888999999999999999999999999765443333222211 113455678899999
Q ss_pred HHHHcccCCCCCCC-----hhHHHH
Q 012608 258 ASRCLQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps-----~~~il~ 277 (460)
|.+||+.||.+||+ ++++++
T Consensus 269 i~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 269 LRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHhhcCHHhccCCccCCHHHHHh
Confidence 99999999999998 888876
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=352.69 Aligned_cols=253 Identities=21% Similarity=0.326 Sum_probs=210.0
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CC-------cEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQ-------RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
.+|++.+.||+|+||.||+|... ++ ..||+|++........+.+.+|+.++++++||||+++++++..++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 56899999999999999999843 34 57999999766555678899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC--------eEEccC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--------PRLSTF 169 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~--------~kl~DF 169 (460)
++||||++|++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+||
T Consensus 88 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEENT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhCC-eECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999999999975 2344899999999999999999999999 999999999999988876 999999
Q ss_pred CCcccCCCCCCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCc
Q 012608 170 GLMKNSRDGKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 170 g~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
|++..........+|+.|+|||.+.+ ..++.++|||||||++|+|++|..|+.............. .....+.
T Consensus 166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~------~~~~~~~ 239 (289)
T 4fvq_A 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE------DRHQLPA 239 (289)
T ss_dssp CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH------TTCCCCC
T ss_pred cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh------ccCCCCC
Confidence 99987766666678999999999987 6689999999999999999997655543322111111111 0122334
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
..++++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 45677999999999999999999999999999997643
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=357.49 Aligned_cols=249 Identities=17% Similarity=0.232 Sum_probs=207.6
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
-++++|++++.||+|+||.||++.. .+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..+
T Consensus 12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~ 91 (384)
T 4fr4_A 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMF 91 (384)
T ss_dssp CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 4578899999999999999999995 458999999986432 334678999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++|++|.+++. ....+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||++......
T Consensus 92 lv~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 92 MVVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQR-IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp EEECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999999997 3567999999999999999999999999 999999999999999999999999999865433
Q ss_pred ---CCccCCCcccCcccccc---CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 ---KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~---~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||........... ..... .....++..+++
T Consensus 169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~-~~~~~--~~~~~~p~~~s~ 245 (384)
T 4fr4_A 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI-VHTFE--TTVVTYPSAWSQ 245 (384)
T ss_dssp CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHH-HHHHH--HCCCCCCTTSCH
T ss_pred CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHH-HHHHh--hcccCCCCcCCH
Confidence 45679999999999964 4589999999999999999999999864322111100 00000 011234566788
Q ss_pred HHHHHHHHHcccCCCCCCC-hhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPN-PKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps-~~~il~ 277 (460)
.+.++|.+||+.||.+||+ ++++++
T Consensus 246 ~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 246 EMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 9999999999999999998 666664
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=346.25 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=201.2
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--------------------------CHHHHHHHHHH
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--------------------------DPRQFLEEARS 75 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~ 75 (460)
..+.+|++++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+
T Consensus 10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 89 (298)
T 2zv2_A 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI 89 (298)
T ss_dssp CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence 3467899999999999999999995 56899999998654311 13568999999
Q ss_pred HhcCCCCccceeeeEEee--CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccC
Q 012608 76 VGQLRNNRLTNLLGCCCE--GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153 (460)
Q Consensus 76 l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp 153 (460)
+++++||||+++++++.. ++..++||||+++++|.+++ ....+++..++.++.||+.||.|||+++ |+||||||
T Consensus 90 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp 165 (298)
T 2zv2_A 90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQK-IIHRDIKP 165 (298)
T ss_dssp HHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCG
T ss_pred HHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCH
Confidence 999999999999999986 56789999999999998866 3567999999999999999999999999 99999999
Q ss_pred CcEEEcCCCCeEEccCCCcccCCCC----CCccCCCcccCccccccCC---CCCCCceehHHHHHHHHhhCCCCCCChhh
Q 012608 154 YRILFDEDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHAL 226 (460)
Q Consensus 154 ~Nill~~~~~~kl~DFg~a~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~sDi~slG~~l~el~tg~~p~~~~~~ 226 (460)
+|||++.++.+||+|||++...... ....||+.|+|||.+.+.. .+.++|||||||++|+|++|..||.....
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 9999999999999999999865543 3457899999999997654 37789999999999999999999876543
Q ss_pred hhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 227 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
........... ........+++++.+++.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 MCLHSKIKSQA----LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHHHHHHHHCC----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHhccc----CCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 33222211111 111112356789999999999999999999999976
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=365.46 Aligned_cols=253 Identities=26% Similarity=0.379 Sum_probs=211.5
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
..++.+.+.||+|+||.||+|... +|+.||||+++...... .+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457888999999999999999965 69999999987543221 3468899999999999999999999999899999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++|++|.+++.. .+..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 193 LVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC-CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp CCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999999999864 2346899999999999999999999999 999999999999999999999999998764432
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....+++.|+|||.+.+..++.++|||||||++|||+| |..||............... .....+..+++.+.
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~ 345 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG-----GRLPCPELCPDAVF 345 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHH
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHH
Confidence 12234678999999998889999999999999999998 88888765433222211111 11223456778999
Q ss_pred HHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 256 RLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+++.+||+.||.+|||+.++++.|+.+.+
T Consensus 346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999988754
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=356.17 Aligned_cols=246 Identities=19% Similarity=0.222 Sum_probs=206.6
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++++.||+|+||.||++.. .+|+.||+|++...... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 589999999999999999995 46999999999765433 245788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC---CCeEEccCCCcccCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~---~~~kl~DFg~a~~~~~~-- 178 (460)
++|++|.+.+. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||++......
T Consensus 110 ~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~ 186 (362)
T 2bdw_A 110 VTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186 (362)
T ss_dssp CCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCS
T ss_pred CCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcc
Confidence 99999999886 3457899999999999999999999999 9999999999999754 45999999999876543
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.................. ........+++++.+|
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~l 264 (362)
T 2bdw_A 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKSL 264 (362)
T ss_dssp CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTGGGGSCHHHHHH
T ss_pred cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHH
Confidence 3457899999999999888999999999999999999999998765443332221111110 1111223567899999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
|.+||+.||.+|||+.++++
T Consensus 265 i~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 265 IDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp HHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHcCCChhhCcCHHHHhc
Confidence 99999999999999999987
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-46 Score=355.81 Aligned_cols=259 Identities=23% Similarity=0.295 Sum_probs=215.0
Q ss_pred hcCCcccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeC
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEG 94 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 94 (460)
.-....|++++.||+|+||.||+|... +++.||||+++...... .+.+.+|+.++++++||||+++++++..+
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 345577899999999999999999963 35889999997654322 46799999999999999999999999999
Q ss_pred CeeEEEEEcCCCCCHHhhhhccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCccccccc
Q 012608 95 DERLLVAEYMPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 152 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dik 152 (460)
+..++||||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+|||||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlk 201 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLA 201 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCS
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCC
Confidence 99999999999999999997532 257899999999999999999999999 9999999
Q ss_pred CCcEEEcCCCCeEEccCCCcccCCC------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChh
Q 012608 153 AYRILFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHA 225 (460)
Q Consensus 153 p~Nill~~~~~~kl~DFg~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~ 225 (460)
|+|||++.++.+||+|||++..... .....+|+.|+|||.+.+..++.++|||||||++|+|+| |..||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999875432 234567889999999998889999999999999999999 888887654
Q ss_pred hhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 226 LDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
............ ....+..+++.+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 282 ~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 HEEVIYYVRDGN-----ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHHHTTC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred hHHHHHHHhCCC-----cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 433322211111 11345567789999999999999999999999999999887653
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-46 Score=360.96 Aligned_cols=255 Identities=20% Similarity=0.313 Sum_probs=211.7
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
.+|++++.||+|+||.||+|.+. +++.||||+++..... ....+.+|+.++++++||||+++++++..++..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 45788999999999999999842 4678999998754322 2457899999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC---CeEEccCC
Q 012608 99 LVAEYMPNETLAKHLFHWE-----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFG 170 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~DFg 170 (460)
+||||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+||+|||
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEEecCCCCceEEECCCc
Confidence 9999999999999997532 245889999999999999999999999 99999999999998554 59999999
Q ss_pred CcccC------CCCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccccccc
Q 012608 171 LMKNS------RDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 171 ~a~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
+++.. .......+|+.|+|||++.+..++.++|||||||++|+|+| |..||................ .
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~-----~ 304 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG-----R 304 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-----C
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----C
Confidence 98743 22334567899999999988889999999999999999998 888887654433332221111 1
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
...+..++..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 2334567789999999999999999999999999999887654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=371.04 Aligned_cols=254 Identities=20% Similarity=0.320 Sum_probs=216.6
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..++++.+.||+|+||.||+|.+. ++..||||+++... ...+.|.+|+.++++++||||+++++++...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 356788999999999999999965 48999999997654 3478899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----- 178 (460)
++|++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 376 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 376 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence 99999999998655677999999999999999999999999 999999999999999999999999999865432
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....+++.|+|||++.+..++.++|||||||++|||+| |..||............. .......+..+++.+.+|
T Consensus 377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~l 451 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----KDYRMERPEGCPEKVYEL 451 (495)
T ss_dssp TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-----TTCCCCCCTTCCHHHHHH
T ss_pred CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHHHHH
Confidence 22345678999999998889999999999999999999 888886644332222111 111223456778999999
Q ss_pred HHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 258 ASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
|.+||+.||.+|||+.++++.|+.+...
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999988643
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=355.10 Aligned_cols=244 Identities=19% Similarity=0.223 Sum_probs=207.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.+..|.+++.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+++.++||||+++++++..++..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 456799999999999999999995 579999999986431 2234679999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||+ +|+|.+++.. .+.+++..++.++.|++.||.|||++| |+||||||+|||+++++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK-IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99999 5889888864 457999999999999999999999999 999999999999999999999999998865443
Q ss_pred --CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....||+.|+|||++.+..+ +.++|||||||++|+|++|..||.............. .....+..+++++.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~------~~~~~p~~~s~~~~ 236 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS------CVYVMPDFLSPGAQ 236 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS------SCCCCCTTSCHHHH
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc------CCCCCcccCCHHHH
Confidence 45678999999999987775 6799999999999999999999876533322211111 11234556788999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||+.++++
T Consensus 237 ~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 237 SLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp HHHHTTSCSSGGGSCCHHHHTT
T ss_pred HHHHHHcCCChhHCcCHHHHHh
Confidence 9999999999999999999987
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=345.37 Aligned_cols=250 Identities=19% Similarity=0.265 Sum_probs=202.9
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+.+|++++.||+|+||+||+|...+|+.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 357899999999999999999987899999999865432 234678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|+++ +|.+++.. ..+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 81 HLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp CCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred ecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 9984 89888864 3467999999999999999999999999 999999999999999999999999998764422
Q ss_pred CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc--------------c------
Q 012608 179 KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------L------ 237 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------------~------ 237 (460)
....+|+.|+|||++.+. .++.++|||||||++|+|++|..||............... .
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence 344679999999999764 4899999999999999999999998764322111110000 0
Q ss_pred ---ccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 ---TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 ---~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+.........+++++.+++.+||+.||.+|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000111223457789999999999999999999999987
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-46 Score=355.14 Aligned_cols=246 Identities=18% Similarity=0.245 Sum_probs=209.3
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
-...+|++++.||+|+||.||+|+. .+|+.||||+++... ....+.+..|..++..+ +||||+++++++...+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 4567899999999999999999995 469999999997532 33467788999999987 999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC-
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR- 176 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~- 176 (460)
|+||||++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 999999999999999874 357999999999999999999999999 9999999999999999999999999987542
Q ss_pred ---CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 177 ---DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 177 ---~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
......||+.|+|||++.+..++.++|+|||||++|+|++|..||............... ...++..++++
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~ 244 (345)
T 1xjd_A 171 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKE 244 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHH
T ss_pred CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CCCCCcccCHH
Confidence 224567899999999999888999999999999999999999999776544333222111 12345567789
Q ss_pred HHHHHHHHcccCCCCCCChh-HHHH
Q 012608 254 LVRLASRCLQYEPRERPNPK-SLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~-~il~ 277 (460)
+.++|.+||+.||.+||++. ++++
T Consensus 245 ~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 245 AKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp HHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred HHHHHHHHhcCCHhHcCCChHHHHc
Confidence 99999999999999999997 6654
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=366.91 Aligned_cols=253 Identities=24% Similarity=0.336 Sum_probs=210.8
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
..+++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++.. +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 5578899999999999999998878889999997654 346789999999999999999999999865 67899999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----CC
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----KS 180 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~~ 180 (460)
|++|.+++....+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ..
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 999999997544456899999999999999999999999 999999999999999999999999999865432 23
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..+++.|+|||.+.+..++.++|||||||++|||+| |..||.+............. .....+..+++.+.++|.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 415 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMC 415 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 345788999999998889999999999999999999 88888765433322221111 112234567889999999
Q ss_pred HHcccCCCCCCChhHHHHHhccccccC
Q 012608 260 RCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
+||+.||.+|||+.++++.|+.+....
T Consensus 416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 416 QCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHccCChhhCcCHHHHHHHHHHHhccC
Confidence 999999999999999999999987554
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=357.76 Aligned_cols=250 Identities=17% Similarity=0.247 Sum_probs=206.5
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC---CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
-+..+|++++.||+|+||.||+++.. +++.||+|+++..... ..+.+.+|..++.++ +||||+++++++..++..
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 128 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL 128 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence 45678999999999999999999954 5889999999754322 245688999999888 899999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC-
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR- 176 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~- 176 (460)
++||||++||+|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 129 ~lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 129 FFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999998874 457999999999999999999999999 9999999999999999999999999997532
Q ss_pred ---CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh-----hccccccccccccCCCCc
Q 012608 177 ---DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR-----DRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 177 ---~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 248 (460)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||......... ......+.. ....++.
T Consensus 206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~ 283 (396)
T 4dc2_A 206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPR 283 (396)
T ss_dssp TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCT
T ss_pred CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCC
Confidence 234567899999999999989999999999999999999999998543211000 000000111 1123566
Q ss_pred hhHHHHHHHHHHHcccCCCCCCCh------hHHHH
Q 012608 249 DDGTELVRLASRCLQYEPRERPNP------KSLVT 277 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~------~~il~ 277 (460)
.+++++.+||.+||+.||.+||++ .++++
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 778999999999999999999986 56665
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=358.89 Aligned_cols=249 Identities=19% Similarity=0.179 Sum_probs=209.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+..|++++.||+|+||.||+|.. .+|+.||+|++......+...+.+|+.++++++||||+++++++...+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 35689999999999999999995 46899999999765544456799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc--CCCCeEEccCCCcccCCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK-- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~--~~~~~kl~DFg~a~~~~~~~-- 179 (460)
++|++|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++.......
T Consensus 130 ~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 130 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 999999998864 3457999999999999999999999999 99999999999997 45779999999998765432
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...........+++++.++|
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li 285 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC--DWEFDEDAFSSVSPEAKDFI 285 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC--CCCCCSSTTTTSCHHHHHHH
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccccccCCHHHHHHH
Confidence 346899999999999888999999999999999999999998765433222211111 11112223446778999999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||+.||.+|||+.++++
T Consensus 286 ~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 286 KNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HTTSCSSGGGSCCHHHHHT
T ss_pred HHHcCCChhHCcCHHHHhh
Confidence 9999999999999999987
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=359.63 Aligned_cols=254 Identities=17% Similarity=0.180 Sum_probs=211.5
Q ss_pred HHHHhcCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEee
Q 012608 18 LKNATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93 (460)
Q Consensus 18 ~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 93 (460)
+........+|++++.||+|+||.||+++.. +|+.||+|+++.. .....+.+.+|+.+++.++||||+++++++..
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3444566778999999999999999999954 5899999998642 12234568899999999999999999999999
Q ss_pred CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 94 ~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
++..|+||||++||+|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g-ivHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG-FIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999853 46899999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC-----CCccCCCcccCccccccCC----CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccC
Q 012608 174 NSRDG-----KSYSTNLAFTPPEYLRTGR----VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 174 ~~~~~-----~~~~~t~~y~aPE~~~~~~----~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (460)
..... ....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.....................
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-- 294 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF-- 294 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC--
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccC--
Confidence 66543 3567999999999997655 788999999999999999999999876544333322221111001
Q ss_pred CCCchhHHHHHHHHHHHcccCCCC--CCChhHHHH
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRE--RPNPKSLVT 277 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~--Rps~~~il~ 277 (460)
.....+++++.+||.+||+.+|.+ ||+++++++
T Consensus 295 p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 295 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 112356789999999999999988 999999997
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=357.77 Aligned_cols=255 Identities=22% Similarity=0.290 Sum_probs=214.4
Q ss_pred cccchhcccCCCCCCeEEEEEEc--------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 95 (460)
..|.+.+.||+|+||.||+|... .+..||||+++..... ..+.+.+|+++++++ +||||+++++++..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 57889999999999999999842 2357999999765432 246789999999999 9999999999999999
Q ss_pred eeEEEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~ 161 (460)
..++||||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCcceEEEcCC
Confidence 9999999999999999997543 245899999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccc
Q 012608 162 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 162 ~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 234 (460)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.......+.....
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 307 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999999999865432 23456788999999998889999999999999999999 888887654433322221
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.. .....+..+++++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 308 ~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 308 EG-----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp TT-----CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred cC-----CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11 122334567789999999999999999999999999999887654
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=339.74 Aligned_cols=251 Identities=19% Similarity=0.256 Sum_probs=201.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC----CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP----DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
++..|++.+.||+|+||.||+|.. .|+.||||+++..... ..+.+.+|+.+++.++||||+++++++..++..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 467899999999999999999997 4899999998754322 25689999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CcccccccCCcEEEcC--------CCCeEEccC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG--RALYHDLNAYRILFDE--------DGNPRLSTF 169 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~iiH~Dikp~Nill~~--------~~~~kl~DF 169 (460)
||||++|++|.+++. ...+++..++.++.|++.||.|||+++ +|+||||||+||+++. ++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999884 567999999999999999999999987 3789999999999986 678999999
Q ss_pred CCcccCCCC--CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 170 GLMKNSRDG--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 170 g~a~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
|++...... ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||............... ......+
T Consensus 161 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~ 236 (271)
T 3dtc_A 161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN----KLALPIP 236 (271)
T ss_dssp CC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS----CCCCCCC
T ss_pred CcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC----CCCCCCC
Confidence 998765433 3457899999999999888999999999999999999999998764433222211111 1122345
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
..+++.+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 56778999999999999999999999999998754
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-45 Score=339.54 Aligned_cols=255 Identities=20% Similarity=0.301 Sum_probs=213.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~l 99 (460)
.+++|++++.||+|+||.||+|+. +|+.||||+++...... .+.+.+|+.++++++||||+++++++... +..++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 567899999999999999999998 48899999998654332 45799999999999999999999999876 77899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
||||++|++|.+++.......+++..++.++.|++.||.|||+.+ +++||||||+||+++.++.++|+|||++.... .
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-~ 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-S 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-C
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec-c
Confidence 999999999999998655557999999999999999999999975 49999999999999999999999988875533 3
Q ss_pred CCccCCCcccCccccccCCCCC---CCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTP---ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~---~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....+|+.|+|||.+.+...+. ++|||||||++|+|++|+.||.............. .......+..+++.+.
T Consensus 166 ~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 241 (271)
T 3kmu_A 166 PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL----EGLRPTIPPGISPHVS 241 (271)
T ss_dssp TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH----SCCCCCCCTTCCHHHH
T ss_pred cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh----cCCCCCCCCCCCHHHH
Confidence 4456899999999998765544 79999999999999999999876543332221111 1112234566788999
Q ss_pred HHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 256 RLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+++.+||+.||.+|||+.++++.|+.+..
T Consensus 242 ~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 242 KLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 99999999999999999999999988753
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=345.55 Aligned_cols=254 Identities=21% Similarity=0.326 Sum_probs=216.6
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..+|++.+.||+|+||.||+|... ++..||+|+++... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 377899999999999999999964 48999999987543 3467899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
++|++|.+++.......+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.++|+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT-CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC-ccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 99999999998766677999999999999999999999999 9999999999999999999999999988665432
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||.............. ......+..+++.+.++
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l 244 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----DYRMERPEGCPEKVYEL 244 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHH
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----cCCCCCCCCCCHHHHHH
Confidence 2345778999999998889999999999999999999 8888865443322221111 11223445677899999
Q ss_pred HHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 258 ASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+.+||..||.+|||+.++++.|+.+...
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999888654
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=353.47 Aligned_cols=246 Identities=19% Similarity=0.258 Sum_probs=209.2
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCC---CCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRM---AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
-...+|++++.||+|+||.||+++.. +|+.||||+++.. .....+.+..|..++..+ +||||+++++++...+..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 45678999999999999999999965 4899999998753 233467889999999998 899999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC-
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR- 176 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~- 176 (460)
|+||||++||+|.+++.. .+.+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++...
T Consensus 97 ~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999999874 356999999999999999999999999 9999999999999999999999999998632
Q ss_pred ---CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 177 ---DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 177 ---~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
......||+.|+|||++.+..++.++|+|||||++|||++|..||.......+....... ...++..++++
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~ 247 (353)
T 2i0e_A 174 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKE 247 (353)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHH
T ss_pred CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHH
Confidence 224567899999999999888999999999999999999999999776544333322221 12345677899
Q ss_pred HHHHHHHHcccCCCCCCCh-----hHHHH
Q 012608 254 LVRLASRCLQYEPRERPNP-----KSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~-----~~il~ 277 (460)
+.++|.+||+.||.+||++ +++++
T Consensus 248 ~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 248 AVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 9999999999999999964 66665
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-45 Score=351.31 Aligned_cols=247 Identities=18% Similarity=0.195 Sum_probs=204.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC-----CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM-----AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.|++++.||+|+||+||++.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 589999999999999999995 56999999998532 222467899999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC---eEEccCCCcccC
Q 012608 101 AEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNS 175 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~DFg~a~~~ 175 (460)
|||++|++|.+.+... .+..+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++...
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN-IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999998877542 2346899999999999999999999999 999999999999976554 999999999876
Q ss_pred CCC----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 176 RDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 176 ~~~----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||................. ........++
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~---~~~~~~~~~s 260 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYK---MNPRQWSHIS 260 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCC---CCHHHHTTSC
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCC---CCccccccCC
Confidence 543 345689999999999988899999999999999999999999977543222111111000 0001113456
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.++|.+||+.||.+|||+.++++
T Consensus 261 ~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 261 ESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 89999999999999999999999987
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=352.93 Aligned_cols=253 Identities=17% Similarity=0.267 Sum_probs=206.8
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcE----EEEEEecCCC-CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRR----IAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.+|++++.||+|+||.||+|.. .+|+. ||+|.+.... ......+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 5689999999999999999994 44554 8888875443 223467889999999999999999999986 466899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||++|++|.+++.. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHTT-CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhCC-CCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999999999864 2457899999999999999999999999 999999999999999999999999999875433
Q ss_pred -----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....+|..|+|||.+.+..++.++|||||||++|+|+| |..||............... .....+..++.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 244 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG-----ERLAQPQICTI 244 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTT-----CBCCCCTTBCT
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcC-----CCCCCCCcCcH
Confidence 23456789999999998889999999999999999999 99888765433222211111 11223444667
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999887653
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=350.65 Aligned_cols=244 Identities=18% Similarity=0.260 Sum_probs=202.8
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (460)
+..+|++++.||+|+||.||+++. .+|+.||+|+++...... .+.+.+|+.++.++ +||||+++++++...+..+
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 456799999999999999999995 468999999997654333 45688999999988 8999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 177 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~- 177 (460)
+||||++|++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG-IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999999864 357999999999999999999999999 99999999999999999999999999875322
Q ss_pred ---CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh-----hhhccccccccccccCCCCch
Q 012608 178 ---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 178 ---~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 249 (460)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||....... ........... ....++..
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~ 241 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS 241 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH--CCCCCCTT
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc--CCCCCCCC
Confidence 245678999999999998889999999999999999999999986421100 00000000111 11234567
Q ss_pred hHHHHHHHHHHHcccCCCCCCCh
Q 012608 250 DGTELVRLASRCLQYEPRERPNP 272 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~ 272 (460)
+++++.++|.+||+.||.+||++
T Consensus 242 ~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 242 LSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCHHHHHHHHHHhcCCHhHCCCC
Confidence 78899999999999999999996
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-45 Score=356.45 Aligned_cols=254 Identities=17% Similarity=0.172 Sum_probs=205.5
Q ss_pred cCCcccchhcccCCC--CCCeEEEEEEc-CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 23 SGFAVENIVSEHGEK--APNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
.+-.+|++++.||+| +||.||++... +|+.||||+++...... .+.+.+|+.++++++||||+++++++..++..
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 455679999999999 99999999954 69999999997654332 46788999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC-
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR- 176 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~- 176 (460)
++||||++|++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||.+....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG-YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999997655577999999999999999999999999 9999999999999999999999999875432
Q ss_pred ----------CCCCccCCCcccCcccccc--CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc------
Q 012608 177 ----------DGKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------ 238 (460)
Q Consensus 177 ----------~~~~~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~------ 238 (460)
......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.................
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 1123467889999999987 5689999999999999999999999865322111111000000
Q ss_pred ----------------------------------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 ----------------------------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 ----------------------------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
........+..+++.+.+||.+||+.||.+|||+.++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000011234456788999999999999999999999987
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=339.01 Aligned_cols=253 Identities=23% Similarity=0.383 Sum_probs=207.2
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC-------HHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
-.+|++.+.||+|+||.||+|.. .+++.||+|++....... .+.+.+|+.++++++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36789999999999999999995 579999999987654332 167899999999999999999999986554
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cccccccCCcEEEcCCCC-----eEEccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGR-ALYHDLNAYRILFDEDGN-----PRLSTFG 170 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-iiH~Dikp~Nill~~~~~-----~kl~DFg 170 (460)
++||||++|++|.+.+.. ....+++..++.++.|++.||.|||++++ |+||||||+|||++.++. +||+|||
T Consensus 97 -~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred -eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 799999999999988865 34579999999999999999999999863 999999999999987776 9999999
Q ss_pred CcccCCCC-CCccCCCcccCccccc--cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 171 LMKNSRDG-KSYSTNLAFTPPEYLR--TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 171 ~a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
++...... ....+|+.|+|||.+. ...++.++|||||||++|+|++|..||.......... .............+
T Consensus 175 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~ 252 (287)
T 4f0f_A 175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTIP 252 (287)
T ss_dssp TCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCCC
T ss_pred ccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCCC
Confidence 99865543 3467899999999984 4457889999999999999999999986543221110 00111112223455
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
..+++.+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 253 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 253 EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 67789999999999999999999999999998764
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=346.21 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=191.3
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.++|++++.||+|+||.||+|.. .+|+.||+|+++..... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 45789999999999999999994 56999999999765432 35789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 103 YMPNETLAKHLFHWE----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
|++ ++|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK-ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 998 69998886421 245899999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc--------------ccc
Q 012608 179 ----KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------LTD 239 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------------~~~ 239 (460)
....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+............. ...
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 162 VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhh
Confidence 345689999999999764 5899999999999999999999998765432211111000 000
Q ss_pred --c------------cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 --S------------CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 --~------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. ......+..++.++.+|+.+||+.||.+|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 0001122346789999999999999999999999987
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-45 Score=348.42 Aligned_cols=245 Identities=18% Similarity=0.240 Sum_probs=200.7
Q ss_pred CCcccchhcccCCCCCCeEEEEEE----cCCcEEEEEEecCCCC----CCHHHHHHHHHHHhcCCCCccceeeeEEeeCC
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMAW----PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 95 (460)
...+|++++.||+|+||.||+++. .+|+.||+|+++.... .....+.+|+.++++++||||+++++++..++
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 456799999999999999999986 4789999999976432 23456889999999999999999999999999
Q ss_pred eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
..++||||++|++|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG-IIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-EEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999999864 456899999999999999999999999 999999999999999999999999998754
Q ss_pred CC----CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 176 RD----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 176 ~~----~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
.. .....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++..++
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~ 245 (327)
T 3a62_A 172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC------KLNLPPYLT 245 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------CCCCCTTSC
T ss_pred ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------CCCCCCCCC
Confidence 32 23457899999999999888999999999999999999999999765443332222111 113455677
Q ss_pred HHHHHHHHHHcccCCCCCC-----ChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rp-----s~~~il~ 277 (460)
.++.+++.+||+.||.+|| ++.++++
T Consensus 246 ~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 246 QEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 8999999999999999999 6778877
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=346.77 Aligned_cols=249 Identities=18% Similarity=0.254 Sum_probs=199.5
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhc--CCCCccceeeeEEeeC----CeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQ--LRNNRLTNLLGCCCEG----DERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~----~~~~l 99 (460)
.+|++++.||+|+||+||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++... +..++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 5689999999999999999987 7899999998653 35567777777776 7999999999986542 45889
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
||||++|++|.+++. ...+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||+
T Consensus 84 v~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA-IAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC-eecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999999994 467999999999999999999999 888 99999999999999999999999999
Q ss_pred cccCCCC--------CCccCCCcccCccccccC------CCCCCCceehHHHHHHHHhhC----------CCCCCChhh-
Q 012608 172 MKNSRDG--------KSYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSG----------KHIPPSHAL- 226 (460)
Q Consensus 172 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDi~slG~~l~el~tg----------~~p~~~~~~- 226 (460)
+...... ....||+.|+|||++.+. .++.++|||||||++|+|+|| ..||.....
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8754332 234789999999999876 455799999999999999999 767643211
Q ss_pred ----hhhhhcc-ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 227 ----DLIRDRN-LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 227 ----~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
....... ........+....+...++.+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1111100 1111111111123345778999999999999999999999999999765
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=339.27 Aligned_cols=253 Identities=22% Similarity=0.312 Sum_probs=215.4
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+.++|++++.||+|+||.||++...+++.||+|++..... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 4578999999999999999999988889999999976543 457899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----- 178 (460)
++|++|.+++.. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 85 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp CTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999999865 3456899999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....++..|+|||.+.+..++.++||||||+++|+|++ |..||............... .....+...++.+.++
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~l 237 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQI 237 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHH
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----CcCCCCccCcHHHHHH
Confidence 33456788999999988889999999999999999999 88888665433322221111 1112344567899999
Q ss_pred HHHHcccCCCCCCChhHHHHHhccccc
Q 012608 258 ASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+.+||+.||.+|||+.++++.|+.+..
T Consensus 238 i~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 238 MNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999988754
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=356.49 Aligned_cols=251 Identities=19% Similarity=0.162 Sum_probs=203.3
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+++..+...+.||+|+||.||+|.. .+|+.||+|+++.......+.+.+|+.++++++||||+++++++...+..++||
T Consensus 86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 165 (373)
T 2x4f_A 86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVM 165 (373)
T ss_dssp GGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 3444444567899999999999995 569999999998765445678999999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE--cCCCCeEEccCCCcccCCCC-
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF--DEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill--~~~~~~kl~DFg~a~~~~~~- 178 (460)
||++|++|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||+++.....
T Consensus 166 E~~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 166 EYVDGGELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp ECCTTCEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 99999999988864 3456899999999999999999999999 9999999999999 56788999999999876543
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.+................ ........+++++.+
T Consensus 244 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~ 321 (373)
T 2x4f_A 244 KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKE 321 (373)
T ss_dssp BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHH
T ss_pred ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHH
Confidence 3446899999999998888999999999999999999999999765443322222111111 111122356789999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
||.+||+.||.+|||+.++++
T Consensus 322 li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 322 FISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHcCCChhhCCCHHHHhc
Confidence 999999999999999999998
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=348.33 Aligned_cols=254 Identities=22% Similarity=0.286 Sum_probs=212.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
...|.+.+.||+|+||.||++.. .+++.||||+++..... ..+.+.+|+.++++++||||+++++++..++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46789999999999999999985 23588999999754322 246789999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCc
Q 012608 98 LLVAEYMPNETLAKHLFHWET----------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~----------------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~N 155 (460)
++||||++|++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+|
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~N 180 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARN 180 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC-Ccccccchhe
Confidence 999999999999999975322 34889999999999999999999999 9999999999
Q ss_pred EEEcCCCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhh
Q 012608 156 ILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDL 228 (460)
Q Consensus 156 ill~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~ 228 (460)
|+++.++.+||+|||++...... ....+|+.|+|||.+.+..++.++|||||||++|+|+| |..||.......
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 260 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260 (314)
T ss_dssp EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999998765432 23356788999999998889999999999999999999 988887654333
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 229 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
........ .....+..+++.+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 261 ~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 261 LFNLLKTG-----HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhhcC-----CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22211111 1223455677899999999999999999999999999987754
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=347.68 Aligned_cols=257 Identities=14% Similarity=0.149 Sum_probs=207.7
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC-CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCC--eeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 101 (460)
..|++++.||+|+||+||+|... +|+.||||+++... ....+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 46899999999999999999954 59999999997543 234678899999999999999999999987665 679999
Q ss_pred EcCCCCCHHhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE----cCCCCeEEccCCCcccCC
Q 012608 102 EYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~DFg~a~~~~ 176 (460)
||++|++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 99999999999975322 34899999999999999999999999 9999999999999 777889999999998765
Q ss_pred CC---CCccCCCcccCccccc--------cCCCCCCCceehHHHHHHHHhhCCCCCCChhhh----hhhhccccccc---
Q 012608 177 DG---KSYSTNLAFTPPEYLR--------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD----LIRDRNLQMLT--- 238 (460)
Q Consensus 177 ~~---~~~~~t~~y~aPE~~~--------~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~----~~~~~~~~~~~--- 238 (460)
.. ....||+.|+|||++. +..++.++|||||||++|+|+||..||...... ..........+
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence 43 3456899999999986 467899999999999999999999988532111 01000000000
Q ss_pred ----------------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 239 ----------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 239 ----------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
.......+...++..+.+++.+||+.||.+|||++++++....-.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 011112345577889999999999999999999999999765443
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-45 Score=364.63 Aligned_cols=245 Identities=22% Similarity=0.254 Sum_probs=201.7
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
...+|++++.||+|+||.||++.. .+|+.||||+++.. .......+.+|+.+++.++||||+++++++...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 456799999999999999999994 56999999998753 22335678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCCeEEccCCCcccCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD- 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~- 177 (460)
||||++|++|.+++.. ...+++..+..++.||+.||.|||+ ++ |+||||||+|||++.++.+||+|||+++....
T Consensus 226 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp EECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EEeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC-EEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 9999999999998864 4579999999999999999999998 88 99999999999999999999999999876432
Q ss_pred ---CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 178 ---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 178 ---~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++..+++++
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~ 376 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLGPEA 376 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHH
Confidence 24567899999999999889999999999999999999999999766544333222211 113455677899
Q ss_pred HHHHHHHcccCCCCCC-----ChhHHHH
Q 012608 255 VRLASRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rp-----s~~~il~ 277 (460)
.+||.+||+.||.+|| |++++++
T Consensus 377 ~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 377 KSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 9999999999999999 9999987
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=342.93 Aligned_cols=254 Identities=19% Similarity=0.303 Sum_probs=202.6
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
++.+|++.+.||+|+||.||++.. .++.||||++... ...+.+.+|+.++++++||||+++++++. +..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 567899999999999999999987 4789999998643 24678999999999999999999999876 458999999
Q ss_pred CCCCCHHhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCCcccccccCCcEEEcCCCC-eEEccCCCcccCCCC
Q 012608 104 MPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTS---KGRALYHDLNAYRILFDEDGN-PRLSTFGLMKNSRDG 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~~iiH~Dikp~Nill~~~~~-~kl~DFg~a~~~~~~ 178 (460)
++|++|.+++..... ..+++..++.++.|++.||.|||+ ++ |+||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA-LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSC-CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCC-eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999975322 247889999999999999999999 78 999999999999998887 799999998765432
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||........... .. .........+..+++.+.++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WA-VHNGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH--HH-HHTTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH--HH-HhcCCCCCcccccCHHHHHH
Confidence 345689999999999988899999999999999999999999864321111000 00 00011122345667899999
Q ss_pred HHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 258 ASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
+.+||+.||.+|||+.++++.|+.+....
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999887654
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=340.56 Aligned_cols=254 Identities=23% Similarity=0.331 Sum_probs=213.6
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
...|++++.||+|+||.||+|...+++.||+|+++... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 46789999999999999999998888899999987644 34678999999999999999999999986 45689999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~ 179 (460)
+|++|.+++.......+++..++.++.|++.||.|||+++ |+||||||+||++++++.+||+|||++...... .
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 9999999996433346999999999999999999999999 999999999999999999999999998865433 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...++..|+|||.+.+..++.++||||||+++++|++ |..||............... .....+..+++.+.+++
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li 243 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-----YRMVRPDNCPEELYQLM 243 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-----cCCCCcccccHHHHHHH
Confidence 3345778999999988889999999999999999999 88888664433222221111 11233456778999999
Q ss_pred HHHcccCCCCCCChhHHHHHhccccccC
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.+||+.||.+|||+.++++.|+.+....
T Consensus 244 ~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 244 RLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999887543
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-45 Score=342.33 Aligned_cols=254 Identities=20% Similarity=0.297 Sum_probs=197.8
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..|++.+.||+|+||+||+|... ..||+|+++...... .+.+.+|+.++++++||||+++++++ ..+..++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 56889999999999999999853 359999997654332 46799999999999999999999965 55678999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC------
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 177 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~------ 177 (460)
++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~-i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS-IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999998854 3467999999999999999999999999 99999999999999999999999999875432
Q ss_pred CCCccCCCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 178 GKSYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 178 ~~~~~~t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
.....||+.|+|||.+. +..++.++||||||+++|+|++|+.||............................+++.+
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHH
Confidence 12456899999999986 556788999999999999999999998653221111111100011111223445677899
Q ss_pred HHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 255 VRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.+++.+||+.||.+|||+.++++.|+.+.+
T Consensus 259 ~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 259 KRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 999999999999999999999999988764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=352.65 Aligned_cols=259 Identities=20% Similarity=0.252 Sum_probs=212.1
Q ss_pred cccchhcccCCCCCCeEEEEEE-----cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEe--eCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~ 98 (460)
..|++++.||+|+||.||++.+ .+++.||||++........+.+.+|++++++++||||+++++++. ..+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4689999999999999999984 358899999998765444667999999999999999999999886 456689
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++|++|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 999999999999998642 346899999999999999999999999 999999999999999999999999999865433
Q ss_pred -------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc----------ccccccc
Q 012608 179 -------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL----------QMLTDSC 241 (460)
Q Consensus 179 -------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~----------~~~~~~~ 241 (460)
....+|..|+|||.+.+..++.++|||||||++|+|++|..||............. .......
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 23456788999999998889999999999999999999998886554332211100 0011111
Q ss_pred ccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 242 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.....+..+++.+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 122345677899999999999999999999999999999887654
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=360.62 Aligned_cols=244 Identities=19% Similarity=0.264 Sum_probs=209.5
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
...|.+++.||+|+||.||+|... +|+.||||+++... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467899999999999999999954 79999999986432 23356899999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|||++|++|.+++. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 95 MEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp EECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999999996 3567999999999999999999999999 999999999999999999999999999876543
Q ss_pred -CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....||+.|+|||++.+..+ +.++|||||||++|+|++|..||................ ...+..+++++.+
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~ 245 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI------FYTPQYLNPSVIS 245 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC------CCCCTTCCHHHHH
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------cCCCccCCHHHHH
Confidence 35678999999999987765 679999999999999999999997654433322221111 1234456789999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||+.||.+|||+.++++
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCchhCcCHHHHHh
Confidence 999999999999999999987
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=341.07 Aligned_cols=250 Identities=16% Similarity=0.195 Sum_probs=203.0
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC-----CCHHHHHHHHHHHhcCC---CCccceeeeEEeeCC-
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-----PDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGD- 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~- 95 (460)
.+|++++.||+|+||+||+|.. .+|+.||||+++.... .....+.+|+.++++++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 5789999999999999999994 5799999999864321 12457788888888775 999999999998765
Q ss_pred ----eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 96 ----ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 96 ----~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
..++||||+. ++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 4789999997 69999998655556999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc----------
Q 012608 172 MKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT---------- 238 (460)
Q Consensus 172 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~---------- 238 (460)
+...... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.................
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence 9865533 345789999999999988999999999999999999999999876543322211111000
Q ss_pred ----cccc-------cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 ----DSCL-------EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 ----~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.... .....+.+++.+.+++.+||+.||.+|||+.++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 00112356788999999999999999999999987
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=350.81 Aligned_cols=252 Identities=17% Similarity=0.257 Sum_probs=203.7
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcE----EEEEEecCCC-CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRR----IAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.+|++++.||+|+||+||+|.. .+|+. ||+|.++... ....+.+.+|+.++++++||||+++++++..++ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 5688999999999999999994 34543 5888876543 234678999999999999999999999997654 789
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
|+||+++++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 9999999999999875 3467999999999999999999999999 999999999999999999999999998765432
Q ss_pred -----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....+|+.|+|||.+.+..++.++|||||||++|+|+| |..||.............. ......+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 246 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-----GERLPQPPICTI 246 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTBCH
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc-----CCCCCCCccCCH
Confidence 22345779999999998899999999999999999999 9988876543322221111 111223456778
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.+..++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999888654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=343.93 Aligned_cols=246 Identities=17% Similarity=0.181 Sum_probs=207.7
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC------CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.|++++.||+|+||.||++... +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++..++..++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 5889999999999999999954 6999999998754422 35789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC----CeEEccCCCcccC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 175 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~DFg~a~~~ 175 (460)
||||++|++|.+++.. ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++ .+||+|||++...
T Consensus 93 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK-IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 9999999999999963 567899999999999999999999999 99999999999999887 7999999999865
Q ss_pred CCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 176 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 176 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
... ....||+.|+|||.+.+..++.++|||||||++|+|++|..||................. ......+...+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~ 247 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY--DFDEEFFSHTSE 247 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTCCH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--ccChhhhcccCH
Confidence 543 345689999999999988899999999999999999999999876544332222111110 011111234568
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+.+++.+||+.||.+|||+.++++
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 8999999999999999999999998
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=349.46 Aligned_cols=259 Identities=18% Similarity=0.258 Sum_probs=198.2
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcC-Cc---EEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLEN-QR---RIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
....|++++.||+|+||.||+|.... +. .||||+++..... ..+.+.+|+.++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34568899999999999999998543 33 7999999765322 357899999999999999999999999876654
Q ss_pred ------EEEEEcCCCCCHHhhhhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEc
Q 012608 98 ------LLVAEYMPNETLAKHLFHWE----THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLS 167 (460)
Q Consensus 98 ------~lv~e~~~g~sL~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~ 167 (460)
++||||++|++|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN-FIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEEC
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC-cccCCCCcceEEEcCCCCEEEe
Confidence 99999999999999886422 225899999999999999999999999 9999999999999999999999
Q ss_pred cCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccc
Q 012608 168 TFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDS 240 (460)
Q Consensus 168 DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 240 (460)
|||++...... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||................
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~--- 256 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN--- 256 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC---
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC---
Confidence 99999765432 23345778999999998889999999999999999999 888886543332222211111
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
....+..+++++.+++.+||+.||.+|||+.++++.|+.+...+..
T Consensus 257 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 257 --RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp --CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred --CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 1233456778999999999999999999999999999998776543
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-45 Score=340.57 Aligned_cols=252 Identities=20% Similarity=0.255 Sum_probs=199.6
Q ss_pred CcccchhcccCCCCCCeEEEEEEcC----CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
...|++.+.||+|+||.||+|.... +..||+|+++..... ..+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3578999999999999999998532 457999998764322 2467899999999999999999999984 567899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~ 179 (460)
||||+++++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 93 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 93 IMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999999999864 3457999999999999999999999999 9999999999999999999999999987654332
Q ss_pred -----CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 180 -----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 180 -----~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
...+|+.|+|||.+.+..++.++||||||+++|+|++ |..||............... .....+..+++.
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~ 245 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPT 245 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----CCCCCCTTCCHH
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcC-----CCCCCCCCCCHH
Confidence 2345778999999988889999999999999999997 88888654332222111111 112345567889
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 246 l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 246 LYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999987754
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-45 Score=348.71 Aligned_cols=244 Identities=20% Similarity=0.231 Sum_probs=205.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.|++++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 378889999999999999994 579999999997654332 3568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCcc
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYS 182 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~ 182 (460)
|++ |+|.+.+.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..........
T Consensus 135 ~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~ 211 (348)
T 1u5q_A 135 YCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV 211 (348)
T ss_dssp CCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred cCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCccc
Confidence 998 678877753 3467999999999999999999999999 9999999999999999999999999998887777788
Q ss_pred CCCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 183 TNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 183 ~t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
||+.|+|||++. ...++.++|||||||++|+|++|..||............... ......+...++.+.+++.
T Consensus 212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~ 287 (348)
T 1u5q_A 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVD 287 (348)
T ss_dssp SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCCCTTSCHHHHHHHH
T ss_pred CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----CCCCCCCCCCCHHHHHHHH
Confidence 999999999984 466899999999999999999999988654332211111111 1111223456788999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.||.+|||+.++++
T Consensus 288 ~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 288 SCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp HHTCSSGGGSCCHHHHTT
T ss_pred HHcccChhhCcCHHHHhh
Confidence 999999999999999987
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=352.54 Aligned_cols=243 Identities=20% Similarity=0.213 Sum_probs=198.9
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCC---CCHHHHHHHHHH-HhcCCCCccceeeeEEeeCCee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW---PDPRQFLEEARS-VGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
...++|++++.||+|+||.||+++.. +++.||||+++.... .....+.+|..+ ++.++||||+++++++...+..
T Consensus 35 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~ 114 (373)
T 2r5t_A 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL 114 (373)
T ss_dssp CCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred CChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence 35578999999999999999999954 589999999975432 224566777776 5778999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC-
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR- 176 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~- 176 (460)
|+||||++|++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 115 ~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 115 YFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN-IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999999874 456899999999999999999999999 9999999999999999999999999987532
Q ss_pred ---CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 177 ---DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 177 ---~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
......||+.|+|||++.+..++.++|+|||||++|||++|..||............... ...++..++..
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~ 265 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNS 265 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS------CCCCCSSSCHH
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc------ccCCCCCCCHH
Confidence 234567899999999999888999999999999999999999999776544433322221 12345567889
Q ss_pred HHHHHHHHcccCCCCCCChhH
Q 012608 254 LVRLASRCLQYEPRERPNPKS 274 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~ 274 (460)
+.++|.+||+.||.+||++.+
T Consensus 266 ~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 266 ARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp HHHHHHHHTCSSGGGSTTTTT
T ss_pred HHHHHHHHcccCHHhCCCCCC
Confidence 999999999999999999854
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=342.20 Aligned_cols=261 Identities=18% Similarity=0.217 Sum_probs=207.1
Q ss_pred HHhcCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCC
Q 012608 20 NATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95 (460)
Q Consensus 20 ~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 95 (460)
.....+.+|++++.||+|+||.||++... +|+.||||++......+ .+.+.+|+.++++++||||+++++++..++
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 2h34_A 28 REGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG 107 (309)
T ss_dssp ------CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred CCCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC
Confidence 34456788999999999999999999954 68999999987654333 367899999999999999999999999999
Q ss_pred eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
..++||||++|++|.+++.. .+.+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++...
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 108 QLYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG-ATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred eEEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc-CCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 99999999999999999874 356999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC-----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 176 RDG-----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 176 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||................. .....+..+
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~ 261 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIP---RPSTVRPGI 261 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCC---CGGGTSTTC
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCC---CccccCCCC
Confidence 432 245688999999999988899999999999999999999999977654433222111111 112334567
Q ss_pred HHHHHHHHHHHcccCCCCCC-ChhHHHHHhccccccC
Q 012608 251 GTELVRLASRCLQYEPRERP-NPKSLVTALSPLQKET 286 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rp-s~~~il~~L~~~~~~~ 286 (460)
++.+.+++.+||+.||.+|| |++++++.|+......
T Consensus 262 ~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 262 PVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp CTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 78999999999999999999 9999999998876554
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=356.32 Aligned_cols=253 Identities=18% Similarity=0.162 Sum_probs=209.3
Q ss_pred hcCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 22 TSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 22 ~~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
.....+|++++.||+|+||+||+++.. +|+.||+|+++... ......+.+|+.++..++||||+++++++..++..
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 345568899999999999999999965 58999999986421 12234588999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
|+||||++||+|.+++.. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 150 ~lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~ 227 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH-YVHRDIKPDNILMDMNGHIRLADFGSCLKLME 227 (437)
T ss_dssp EEEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-eEecccCHHHeeEcCCCCEEEcchhhhhhccc
Confidence 999999999999999974 2467999999999999999999999999 99999999999999999999999999976543
Q ss_pred C-----CCccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 178 G-----KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 178 ~-----~~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
. ....||+.|+|||++. ...++.++|||||||++|||++|+.||..................... +...
T Consensus 228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-p~~~ 306 (437)
T 4aw2_A 228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF-PTQV 306 (437)
T ss_dssp TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC-CSSC
T ss_pred CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccC-Cccc
Confidence 3 2357899999999987 456899999999999999999999999876544333322221111111 1222
Q ss_pred chhHHHHHHHHHHHcccCCCC--CCChhHHHH
Q 012608 248 DDDGTELVRLASRCLQYEPRE--RPNPKSLVT 277 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~--Rps~~~il~ 277 (460)
..+++++.+||.+||..+|++ ||+++++++
T Consensus 307 ~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 307 TDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 357789999999999988888 999999987
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-45 Score=343.18 Aligned_cols=256 Identities=16% Similarity=0.143 Sum_probs=210.5
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.+|++++.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.+++++ +|+||+++++++..+...++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 4689999999999999999994 679999999986543 345688999999999 899999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC-----eEEccCCCcccCCCC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN-----PRLSTFGLMKNSRDG 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~-----~kl~DFg~a~~~~~~ 178 (460)
+ |++|.+++.. .+..+++..+..++.|++.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 88 ~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 8999999975 3456999999999999999999999999 999999999999987765 999999998765432
Q ss_pred -----------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh---hhhhccccccccccccC
Q 012608 179 -----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD---LIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 179 -----------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~ 244 (460)
....||+.|+|||.+.+..++.++|||||||++|+|++|+.||...... ......... .......
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~ 243 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK-KQSTPLR 243 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH-HHHSCHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh-ccCccHH
Confidence 3456899999999999888999999999999999999999998763211 000000000 0001111
Q ss_pred CCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCC
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~ 287 (460)
.....+++++.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 244 ~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 244 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 2233567899999999999999999999999999998876543
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-45 Score=349.75 Aligned_cols=244 Identities=20% Similarity=0.245 Sum_probs=191.1
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.|++.+.||+|+||.||+|... +++.||||+++... ..+.+.+|+.++++++||||+++++++..++..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 3788999999999999999964 58899999997643 34678899999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCcccCCCC---C
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG---K 179 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~~~~~---~ 179 (460)
|++|.+++.. .+.+++..++.++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||+++..... .
T Consensus 132 ~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 132 GGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENG-IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp SCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 9999998863 456899999999999999999999999 999999999999975 889999999998865433 3
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh-hhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...||+.|+|||++.+..++.++|||||||++|+|++|..||....... ......... ..........++.++.+++
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~li 286 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE--YYFISPWWDEVSLNAKDLV 286 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC--CCCCTTTTTTSCHHHHHHH
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC--CccCCchhhhCCHHHHHHH
Confidence 4568999999999998889999999999999999999999986543322 111111110 1111123346778999999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||+.||++|||+.++++
T Consensus 287 ~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 287 RKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhhCcCHHHHhc
Confidence 9999999999999999998
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=343.89 Aligned_cols=258 Identities=22% Similarity=0.308 Sum_probs=211.7
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEE--EEEEecCCC-CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRI--AVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~v--avK~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (460)
++.+|++.+.||+|+||.||+|.. .+|..+ |+|.++... ....+.+.+|+.+++++ +||||+++++++...+..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 346789999999999999999994 456654 999987543 23356799999999999 9999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCe
Q 012608 99 LVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 164 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~ 164 (460)
+||||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCE
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCccceEEEcCCCeE
Confidence 9999999999999997532 247899999999999999999999999 9999999999999999999
Q ss_pred EEccCCCcccCCC---CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccc
Q 012608 165 RLSTFGLMKNSRD---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDS 240 (460)
Q Consensus 165 kl~DFg~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 240 (460)
||+|||+++.... .....+++.|+|||.+.+..++.++|||||||++|+|+| |..||...............
T Consensus 182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~---- 257 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---- 257 (327)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT----
T ss_pred EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC----
Confidence 9999999874332 233456789999999988889999999999999999998 99888765443333222211
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCC
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~ 287 (460)
.....+..+++.+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 258 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 258 -YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp -CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1123445677899999999999999999999999999998876543
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=347.84 Aligned_cols=252 Identities=17% Similarity=0.227 Sum_probs=200.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCe----e
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE----R 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~ 97 (460)
..|++++.||+|+||.||++.. .+|+.||||+++.....+ ...+.+|+.++++++||||+++++++...+. .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 4689999999999999999995 679999999998765444 3468899999999999999999999876543 4
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||++|++|.+++.. .+.+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999864 457999999999999999999999999 99999999999999999999999999876543
Q ss_pred C-------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 178 G-------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 178 ~-------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
. ....||+.|+|||++.+..++.++|||||||++|+|+||+.||................. .........+
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 246 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGL 246 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC--CCHHHHSTTC
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC--CCcccccCCC
Confidence 2 234589999999999988899999999999999999999999976544332221111111 0111122346
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHH-HHhccc
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLV-TALSPL 282 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il-~~L~~~ 282 (460)
+.++.+++.+||+.||.+||++.+++ ..+...
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 78999999999999999999666655 445444
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=345.70 Aligned_cols=268 Identities=21% Similarity=0.264 Sum_probs=205.7
Q ss_pred ccCHHHHHHHhcCCc------ccchhcccCCCCCCeEEEEEEcC-----CcEEEEEEecCCCCC-CHHHHHHHHHHHhcC
Q 012608 12 EFTLEQLKNATSGFA------VENIVSEHGEKAPNVVYKGKLEN-----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQL 79 (460)
Q Consensus 12 ~~~~~~~~~~~~~f~------~~~i~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l 79 (460)
.+...+...++..|. .|.+.+.||+|+||.||+|.... +..||||+++..... ....+.+|+.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 103 (333)
T 1mqb_A 24 GAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103 (333)
T ss_dssp --------------CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC
T ss_pred ccccCChhhhhhhccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC
Confidence 344555666665663 47788999999999999998532 245999999765422 245789999999999
Q ss_pred CCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc
Q 012608 80 RNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159 (460)
Q Consensus 80 ~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~ 159 (460)
+||||+++++++...+..++||||++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++
T Consensus 104 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~ 181 (333)
T 1mqb_A 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVN 181 (333)
T ss_dssp CCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEC
T ss_pred CCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCChheEEEC
Confidence 999999999999999999999999999999999865 3467999999999999999999999999 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCCC-------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhh
Q 012608 160 EDGNPRLSTFGLMKNSRDGK-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRD 231 (460)
Q Consensus 160 ~~~~~kl~DFg~a~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~ 231 (460)
.++.+||+|||++....... ...+|+.|+|||.+.+..++.++|||||||++|+|++ |..||..........
T Consensus 182 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~ 261 (333)
T 1mqb_A 182 SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK 261 (333)
T ss_dssp TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred CCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence 99999999999988654321 2234678999999998889999999999999999999 998886544332222
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 232 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
..... .....+..++..+.+++.+||+.||.+||++.++++.|+.+....
T Consensus 262 ~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 262 AINDG-----FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HHHTT-----CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHCC-----CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 21111 111234467789999999999999999999999999999887643
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=345.67 Aligned_cols=244 Identities=17% Similarity=0.261 Sum_probs=196.5
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCC--------
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD-------- 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 95 (460)
.+|++++.||+|+||.||+|+.. +|+.||||+++..... ..+.+.+|+.++++++||||+++++++...+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 46889999999999999999965 7999999999755433 3578999999999999999999999986543
Q ss_pred -------------------------------------------------eeEEEEEcCCCCCHHhhhhccCC-CCCCHHH
Q 012608 96 -------------------------------------------------ERLLVAEYMPNETLAKHLFHWET-HPMKWAM 125 (460)
Q Consensus 96 -------------------------------------------------~~~lv~e~~~g~sL~~~~~~~~~-~~~~~~~ 125 (460)
..++||||++|++|.+++..... ...++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 27999999999999999975322 2345667
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----------------CCccCCCcccC
Q 012608 126 RLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----------------KSYSTNLAFTP 189 (460)
Q Consensus 126 ~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----------------~~~~~t~~y~a 189 (460)
++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 166 ~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSKG-LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHhCC-eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 8999999999999999999 999999999999999999999999998865443 23468999999
Q ss_pred ccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCC
Q 012608 190 PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269 (460)
Q Consensus 190 PE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 269 (460)
||.+.+..++.++|||||||++|+|++|..|+..... .... .... .........++.+.+++.+||+.||.+|
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-~~~~-~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~R 317 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-IITD-VRNL-----KFPLLFTQKYPQEHMMVQDMLSPSPTER 317 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-HHHH-HHTT-----CCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-HHHH-hhcc-----CCCcccccCChhHHHHHHHHccCCCCcC
Confidence 9999988899999999999999999999765322111 1110 0000 0001122445778999999999999999
Q ss_pred CChhHHHH
Q 012608 270 PNPKSLVT 277 (460)
Q Consensus 270 ps~~~il~ 277 (460)
||+.++++
T Consensus 318 ps~~~~l~ 325 (332)
T 3qd2_B 318 PEATDIIE 325 (332)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHhh
Confidence 99999998
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-45 Score=347.07 Aligned_cols=253 Identities=19% Similarity=0.187 Sum_probs=211.7
Q ss_pred ccccCHHHHHHHhcCCc-ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--------CHHHHHHHHHHHhcC
Q 012608 10 FREFTLEQLKNATSGFA-VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--------DPRQFLEEARSVGQL 79 (460)
Q Consensus 10 ~~~~~~~~~~~~~~~f~-~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l 79 (460)
.+.++++++....+.|. .|++++.||+|+||.||+|.. .+|+.||||+++..... ....+.+|+.+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 86 (335)
T 3dls_A 7 PKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV 86 (335)
T ss_dssp --CEECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC
T ss_pred cccccccccccCCcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC
Confidence 34556666666666664 589999999999999999994 56999999999765422 234678899999999
Q ss_pred CCCccceeeeEEeeCCeeEEEEEcCCCC-CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE
Q 012608 80 RNNRLTNLLGCCCEGDERLLVAEYMPNE-TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158 (460)
Q Consensus 80 ~h~~iv~~~~~~~~~~~~~lv~e~~~g~-sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill 158 (460)
+||||+++++++...+..++||||+.+| +|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||+
T Consensus 87 ~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll 163 (335)
T 3dls_A 87 EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLKD-IIHRDIKDENIVI 163 (335)
T ss_dssp CCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEE
T ss_pred CCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC-eEEeccCHHHEEE
Confidence 9999999999999999999999999766 9999886 3457999999999999999999999999 9999999999999
Q ss_pred cCCCCeEEccCCCcccCCCC---CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc
Q 012608 159 DEDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 159 ~~~~~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 234 (460)
+.++.+||+|||++...... ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||...... .
T Consensus 164 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~ 237 (335)
T 3dls_A 164 AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------V 237 (335)
T ss_dssp CTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------T
T ss_pred cCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------H
Confidence 99999999999999866543 24568999999999988776 78999999999999999999998652110 0
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. .....+..+++++.+++.+||+.||.+|||+.++++
T Consensus 238 ~------~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 238 E------AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp T------TCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred h------hccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 011223446789999999999999999999999998
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-45 Score=348.32 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=212.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE--------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL--------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG 94 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 94 (460)
..+|++++.||+|+||.||+|.. .++..||||+++..... ..+.+.+|+.+++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 47899999999999999999985 34678999999765422 246789999999999 899999999999999
Q ss_pred CeeEEEEEcCCCCCHHhhhhccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC
Q 012608 95 DERLLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~ 160 (460)
+..++||||++|++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+||+++.
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~ 192 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK-CIHRDLAARNVLVTE 192 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECT
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCccceEEEcC
Confidence 999999999999999999975321 24889999999999999999999999 999999999999999
Q ss_pred CCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcc
Q 012608 161 DGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 233 (460)
Q Consensus 161 ~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 233 (460)
++.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||............
T Consensus 193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 272 (334)
T 2pvf_A 193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272 (334)
T ss_dssp TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHH
Confidence 999999999998765432 23356788999999988889999999999999999999 88888765443332221
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
... .....+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 273 ~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 273 KEG-----HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HHT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hcC-----CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 111 112334567789999999999999999999999999999887543
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-45 Score=345.86 Aligned_cols=255 Identities=21% Similarity=0.310 Sum_probs=212.0
Q ss_pred cccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
..|++.+.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.+++++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 6789999999999999999984 34789999999765432 256799999999999 999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC
Q 012608 98 LLVAEYMPNETLAKHLFHWET----------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~ 161 (460)
++||||++|++|.+++..... ..+++..++.++.|++.||.|||+++ |+||||||+||+++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCccceEEEcCC
Confidence 999999999999999975432 25899999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccc
Q 012608 162 GNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 162 ~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 234 (460)
+.+||+|||++....... ...+|+.|+|||.+.+..++.++||||||+++|+|+| |..||.............
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 261 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence 999999999988665432 2345778999999988889999999999999999999 888876543221111111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
. .......+..++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 262 ~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 262 K----EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp H----HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----cCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1 1111223456678999999999999999999999999999887654
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-45 Score=356.24 Aligned_cols=247 Identities=14% Similarity=0.136 Sum_probs=194.1
Q ss_pred Ccccchh-cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEee----CCee
Q 012608 25 FAVENIV-SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE----GDER 97 (460)
Q Consensus 25 f~~~~i~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~ 97 (460)
+.+|.++ +.||.|+||+||++.. .+|+.||||+++. ...+.+|+.++.++ +||||+++++++.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456666 6899999999999995 4699999999863 35678899988555 89999999999875 5678
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCccc
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKN 174 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~ 174 (460)
|+||||++||+|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 99999999999999998655567999999999999999999999999 999999999999987 78899999999986
Q ss_pred CCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc--cccccCCCCch
Q 012608 175 SRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--DSCLEGQFTDD 249 (460)
Q Consensus 175 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 249 (460)
.... ....||+.|+|||++.+..++.++|||||||++|+|++|..||...............+. ...........
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 293 (400)
T 1nxk_A 214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293 (400)
T ss_dssp CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTT
T ss_pred cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccccc
Confidence 5433 355789999999999988899999999999999999999999865432111000000000 00011112245
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++.++.+||.+||+.||.+|||+.++++
T Consensus 294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 294 VSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 7789999999999999999999999998
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=351.53 Aligned_cols=257 Identities=21% Similarity=0.268 Sum_probs=208.5
Q ss_pred CcccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCe
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 96 (460)
...|++++.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.+++++ +||||+++++++..++.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 36788999999999999999985 2466899999975432 2357899999999999 89999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCc
Q 012608 97 RLLVAEYMPNETLAKHLFHWET---------------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~---------------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~N 155 (460)
.++||||++|++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+|
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~N 202 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARN 202 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCChhh
Confidence 9999999999999999975332 24789999999999999999999999 9999999999
Q ss_pred EEEcCCCCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhh
Q 012608 156 ILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDL 228 (460)
Q Consensus 156 ill~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~ 228 (460)
||++.++.+||+|||++....... ...+|+.|+|||.+.+..++.++|||||||++|+|+| |..||.......
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 282 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence 999999999999999987654332 3345788999999988889999999999999999998 988886543221
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 229 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
....... .......+..+++++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 283 ~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 283 NFYKLIQ----NGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp HHHHHHH----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHHHHh----cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 1111111 11112334566789999999999999999999999999998886543
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-45 Score=354.54 Aligned_cols=257 Identities=22% Similarity=0.290 Sum_probs=209.4
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeC
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG 94 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 94 (460)
-...+|++++.||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 3456789999999999999999973 24689999999765432 245799999999999 899999999998875
Q ss_pred Ce-eEEEEEcCCCCCHHhhhhccCC-------------------------------------------------------
Q 012608 95 DE-RLLVAEYMPNETLAKHLFHWET------------------------------------------------------- 118 (460)
Q Consensus 95 ~~-~~lv~e~~~g~sL~~~~~~~~~------------------------------------------------------- 118 (460)
+. .++||||++|++|.+++.....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 54 8999999999999999975321
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------CCccC
Q 012608 119 ---------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------KSYST 183 (460)
Q Consensus 119 ---------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------~~~~~ 183 (460)
..+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++...... ....+
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 12889999999999999999999999 999999999999999999999999999865332 23456
Q ss_pred CCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHc
Q 012608 184 NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCL 262 (460)
Q Consensus 184 t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 262 (460)
|+.|+|||++.+..++.++|||||||++|+|+| |..||.............. .......+..+++++.+++.+||
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l 333 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCW 333 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH----HTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHc
Confidence 889999999998889999999999999999998 9988865432211111111 11122344567789999999999
Q ss_pred ccCCCCCCChhHHHHHhccccc
Q 012608 263 QYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 263 ~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+.||.+|||+.++++.|+.+..
T Consensus 334 ~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 334 HGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCChhhCCCHHHHHHHHHHHHH
Confidence 9999999999999999987754
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-45 Score=343.98 Aligned_cols=256 Identities=18% Similarity=0.294 Sum_probs=207.2
Q ss_pred cccchhcccCCCCCCeEEEEEE-----cCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeC--Cee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~ 97 (460)
..|++++.||+|+||.||++.+ .+|+.||||+++.... ...+.+.+|+.++++++||||+++++++... +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3488999999999999999983 3589999999975443 3467899999999999999999999999876 668
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 101 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcCC-cccCCCchheEEEcCCCCEEECcccccccccC
Confidence 999999999999999854 3456999999999999999999999999 99999999999999999999999999986553
Q ss_pred C-------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh----------ccccccccc
Q 012608 178 G-------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNLQMLTDS 240 (460)
Q Consensus 178 ~-------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~----------~~~~~~~~~ 240 (460)
. ....+|..|+|||.+.+..++.++||||||+++|+|+||..|+.......... .........
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE 258 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHT
T ss_pred CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhc
Confidence 3 23456788999999998889999999999999999999998754332111100 000000111
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
......+..+++.+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 259 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 259 GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1122345567889999999999999999999999999998763
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=367.93 Aligned_cols=254 Identities=24% Similarity=0.331 Sum_probs=214.9
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
...+++.+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.+|++++||||+++++++.. +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 35678899999999999999998888889999998654 346789999999999999999999999865 6789999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~ 179 (460)
+|++|.+++....+..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 422 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTC
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCCCHhhEEEcCCCcEEEcccccceecCCCceeccc
Confidence 9999999996544456899999999999999999999999 999999999999999999999999999865432 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...++..|+|||++.+..++.++|||||||++|||+| |..||............... .....+..++..+.+||
T Consensus 423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 497 (535)
T 2h8h_A 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLM 497 (535)
T ss_dssp STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHH
Confidence 3446788999999998889999999999999999999 88888765433322221111 11123456778999999
Q ss_pred HHHcccCCCCCCChhHHHHHhccccccC
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.+||+.||++|||+.++++.|+.+....
T Consensus 498 ~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 498 CQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 9999999999999999999999987543
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-45 Score=339.20 Aligned_cols=253 Identities=25% Similarity=0.349 Sum_probs=205.4
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeC-CeeEEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG-DERLLVA 101 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~ 101 (460)
-++.+|++++.||+|+||.||++.. +|+.||||+++... ..+.+.+|+.++++++||||+++++++... +..++||
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred CChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 4567899999999999999999987 58899999987543 467899999999999999999999997554 4789999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-CC
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KS 180 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~ 180 (460)
||++|++|.+++.......+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++...... ..
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 173 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 173 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCcceEEEeCCCcEEEeeccccccccccccC
Confidence 9999999999997543334889999999999999999999999 999999999999999999999999998765443 34
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
..+++.|+|||.+.+..++.++||||||+++|+|+| |..||............... .....+..+++.+.+++.
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 248 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-----YKMDAPDGCPPAVYEVMK 248 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT-----CCCCCCTTCCHHHHHHHH
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCcccCCHHHHHHHH
Confidence 457889999999988889999999999999999998 98888654333222211111 122345567789999999
Q ss_pred HHcccCCCCCCChhHHHHHhccccc
Q 012608 260 RCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+||+.||.+|||+.++++.|+.+..
T Consensus 249 ~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 249 NCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcCChhhCCCHHHHHHHHHHHHh
Confidence 9999999999999999999988754
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=337.61 Aligned_cols=245 Identities=21% Similarity=0.293 Sum_probs=206.8
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.+.+|++++.||+|+||.||++.. .+++.||+|++.... ......+.+|+.++++++||||+++++++...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 456799999999999999999985 458899999985432 2235678999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~-i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-CEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999998864 356899999999999999999999999 999999999999999999999999988654433
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..||.............. ....++...++.+.++
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l 237 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDL 237 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH------TCCCCCTTSCHHHHHH
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh------CCCCCCCcCCHHHHHH
Confidence 455789999999999988899999999999999999999999876544333222111 1123445577899999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
+.+||+.||.+|||+.++++
T Consensus 238 i~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHH
T ss_pred HHHHhccChhhCCCHHHHhh
Confidence 99999999999999999998
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=340.79 Aligned_cols=263 Identities=17% Similarity=0.227 Sum_probs=205.8
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
..+.+|++++.||+|+||.||+|.. .+|+.||||+++.....+ ...+.+|+.++++++||||+++++++...+..+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 4567899999999999999999995 579999999997644333 457889999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 99 LVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
+||||+++++|.+++... ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++....
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR-VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999988642 3467899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 177 DG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 177 ~~----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
.. ....+++.|+|||.+.+..++.++||||||+++|+|++|..||.+......... ...............+++
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH--HHHHTTCSCCCCTTTSCH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH--HHhhcccCCCCcccccCH
Confidence 32 244688999999999988899999999999999999999999865432111000 000001111112345678
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
++.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999876543
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-45 Score=353.50 Aligned_cols=257 Identities=15% Similarity=0.156 Sum_probs=203.8
Q ss_pred cccchhcccCCCCCCeEEEEEEcC------CcEEEEEEecCCCCC-----------CHHHHHHHHHHHhcCCCCccceee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN------QRRIAVKRFNRMAWP-----------DPRQFLEEARSVGQLRNNRLTNLL 88 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~~iv~~~ 88 (460)
..|++++.||+|+||.||+|.+.. ++.||||++...... ....+..|+..++.++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 478999999999999999998644 478999998654311 012344566677778899999999
Q ss_pred eEEeeC----CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc--CCC
Q 012608 89 GCCCEG----DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDG 162 (460)
Q Consensus 89 ~~~~~~----~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~--~~~ 162 (460)
+++... ...++||||+ |++|.+++.. ..+.+++..++.++.||+.||.|||+++ |+||||||+|||++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~-iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE-YVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eEEecCCHHHEEEecCCCC
Confidence 998764 4589999999 9999999875 3467999999999999999999999999 99999999999998 889
Q ss_pred CeEEccCCCcccCCCC-----------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh
Q 012608 163 NPRLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD 231 (460)
Q Consensus 163 ~~kl~DFg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~ 231 (460)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||..........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999754322 23458999999999998889999999999999999999999987532211100
Q ss_pred --------ccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 232 --------RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 232 --------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
.....+.+.++ ....++.++.+++..||+.+|.+||++.++++.|+.+......
T Consensus 272 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCF---PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHS---CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhhhHHHHHHHhc---ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 01111111111 1235568999999999999999999999999999988765543
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-45 Score=346.18 Aligned_cols=255 Identities=22% Similarity=0.307 Sum_probs=209.3
Q ss_pred cchhcccCCCCCCeEEEEEE-----cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeC--CeeEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG--DERLL 99 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~l 99 (460)
+++++.||+|+||+||++.+ .+|+.||||+++..... ..+.+.+|+.++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48999999999999998864 26889999999865422 246789999999999999999999999874 67899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||+++++|.+++.. ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~~-ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 9999999999999953 45999999999999999999999999 999999999999999999999999999876543
Q ss_pred ------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh----------ccccccccccc
Q 012608 179 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNLQMLTDSCL 242 (460)
Q Consensus 179 ------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~----------~~~~~~~~~~~ 242 (460)
....+|..|+|||.+.+..++.++||||||+++|+|+||..||.......... ...........
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 23456788999999998889999999999999999999998876543221110 00111111112
Q ss_pred cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 243 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
....+..+++++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 23345667889999999999999999999999999999886543
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=336.00 Aligned_cols=245 Identities=18% Similarity=0.196 Sum_probs=206.2
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 5889999999999999999954 588999999987766678899999999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE---cCCCCeEEccCCCcccCCCC---C
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG---K 179 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~DFg~a~~~~~~---~ 179 (460)
|++|.+++.. ...+++..++.++.|++.||.|||+++ |+||||||+||++ +.++.++|+|||++...... .
T Consensus 90 ~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~ 166 (277)
T 3f3z_A 90 GGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN-VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR 166 (277)
T ss_dssp SCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC
T ss_pred CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh
Confidence 9999998864 456899999999999999999999999 9999999999999 78899999999998765433 3
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...+|+.|+|||.+.+ .++.++||||||+++|+|++|..||.................. ........+++.+.+++.
T Consensus 167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~ 243 (277)
T 3f3z_A 167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFT--FPEKDWLNVSPQAESLIR 243 (277)
T ss_dssp CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCHHHHTTSCHHHHHHHH
T ss_pred ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCchhhhcCCHHHHHHHH
Confidence 4568999999999874 4899999999999999999999998765433322221111110 000011145689999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.||.+|||+.++++
T Consensus 244 ~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 244 RLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHTCSSTTTSCCHHHHTT
T ss_pred HHccCChhhCcCHHHHhc
Confidence 999999999999999986
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=338.23 Aligned_cols=255 Identities=20% Similarity=0.250 Sum_probs=212.1
Q ss_pred cccchhc-ccCCCCCCeEEEEEEc---CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 26 AVENIVS-EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 26 ~~~~i~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
..|.+++ .||+|+||.||+|... ++..||||+++..... ..+.+.+|+.++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4567776 8999999999999843 5788999999765322 356799999999999999999999999 55678999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|||++|++|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC-EeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999864 3456999999999999999999999999 999999999999999999999999998865432
Q ss_pred -----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....+|+.|+|||.+.+..++.++||||||+++|+|+| |..||............... .....+..+++
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~ 240 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-----KRMECPPECPP 240 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTT-----CCCCCCTTCCH
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcC-----CcCCCCCCcCH
Confidence 22345788999999988889999999999999999998 99888654433222211111 11234567789
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
.+.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999988765443
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=341.77 Aligned_cols=240 Identities=20% Similarity=0.242 Sum_probs=197.0
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
..|+++++||+|+||+||+|... +|+.||||++....... ...+..|+..+.++ +||||+++++++..++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 45888999999999999999965 79999999987654332 33556666666666 8999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||+ +++|.+++... +..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp ECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred ecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-EecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 999 57998888653 457999999999999999999999999 999999999999999999999999998765433
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh-hhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....||+.|+|||++.+ .++.++|||||||++|+|++|..|+..... ..+... .....++..+++++.++
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~l 284 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQG--------YLPPEFTAGLSSELRSV 284 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTT--------CCCHHHHTTSCHHHHHH
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhcc--------CCCcccccCCCHHHHHH
Confidence 34568999999999875 789999999999999999999766654322 111111 11112234567899999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
+.+||+.||.+|||+.++++
T Consensus 285 i~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 285 LVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHcCCChhhCcCHHHHHh
Confidence 99999999999999999997
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-45 Score=355.59 Aligned_cols=255 Identities=19% Similarity=0.168 Sum_probs=208.2
Q ss_pred HHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeC
Q 012608 19 KNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG 94 (460)
Q Consensus 19 ~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 94 (460)
....-...+|++++.||+|+||.||+++. .+|+.||||+++... ....+.+.+|+.++..++||||+++++++...
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 34455667899999999999999999995 469999999986421 11234588999999999999999999999999
Q ss_pred CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
+..|+||||++||+|.+++... +..+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g-iiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG-YVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccCHHHeeecCCCCEEEeechhhee
Confidence 9999999999999999999642 347999999999999999999999999 99999999999999999999999999986
Q ss_pred CCCC-----CCccCCCcccCccccc-------cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccc
Q 012608 175 SRDG-----KSYSTNLAFTPPEYLR-------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 242 (460)
Q Consensus 175 ~~~~-----~~~~~t~~y~aPE~~~-------~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (460)
.... ....||+.|+|||++. ...++.++|||||||++|||++|+.||................... .
T Consensus 212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~-~ 290 (412)
T 2vd5_A 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHL-S 290 (412)
T ss_dssp CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-C
T ss_pred ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCc-C
Confidence 6543 2357899999999987 3568999999999999999999999997765443332222111000 0
Q ss_pred cCCCCchhHHHHHHHHHHHcccCCCCC---CChhHHHH
Q 012608 243 EGQFTDDDGTELVRLASRCLQYEPRER---PNPKSLVT 277 (460)
Q Consensus 243 ~~~~~~~~~~~l~~li~~~l~~~p~~R---ps~~~il~ 277 (460)
....+..+++++.+||.+||. +|.+| |+++++++
T Consensus 291 ~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 291 LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 112234677899999999999 99998 58999886
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=335.61 Aligned_cols=248 Identities=19% Similarity=0.218 Sum_probs=207.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
-.+|++++.||+|+||.||+|.. .+|+.||+|++...... ..+.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 35689999999999999999995 46999999998754433 2467889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC---eEEccCCCcccCCCC
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDG 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~DFg~a~~~~~~ 178 (460)
||++|++|.+.+.. ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG-IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 99999999888864 356899999999999999999999999 999999999999976554 999999998766543
Q ss_pred C---CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 K---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 ~---~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
. ...+|+.|+|||.+.+..++.++||||||+++|+|++|..||.................. ........+++++.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 239 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAK 239 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTTTTTSCHHHH
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc--CCchhhcccCHHHH
Confidence 3 457899999999999888999999999999999999999998765443333222111111 11122345678999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||+.++++
T Consensus 240 ~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 240 SLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHcccChhhCCCHHHHhc
Confidence 9999999999999999999987
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-45 Score=365.93 Aligned_cols=252 Identities=18% Similarity=0.245 Sum_probs=211.1
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
-...+|++++.||+|+||.||++.. .+|+.||+|++... .......+.+|+.++++++||||+++++++...+..+
T Consensus 181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 260 (576)
T 2acx_A 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260 (576)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEE
Confidence 4456789999999999999999995 46999999998643 2234667899999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++||+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g-IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER-IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-EeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 9999999999999997655556999999999999999999999999 999999999999999999999999999876543
Q ss_pred ---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................. .....++..+++++.
T Consensus 340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--~~~~~~p~~~s~~~~ 417 (576)
T 2acx_A 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--EVPEEYSERFSPQAR 417 (576)
T ss_dssp CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--HCCCCCCTTSCHHHH
T ss_pred ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--cccccCCccCCHHHH
Confidence 345789999999999988899999999999999999999999876421100000000000 112234567789999
Q ss_pred HHHHHHcccCCCCCC-----ChhHHHH
Q 012608 256 RLASRCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rp-----s~~~il~ 277 (460)
+||.+||+.||.+|| ++.++++
T Consensus 418 dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 418 SLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred HHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 999999999999999 6788876
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=334.56 Aligned_cols=249 Identities=17% Similarity=0.206 Sum_probs=190.5
Q ss_pred HhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 21 ATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 21 ~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
....+.+|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 6 ~g~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 85 (278)
T 3cok_A 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNY 85 (278)
T ss_dssp HCSSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSE
T ss_pred cccccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCe
Confidence 345667899999999999999999995 579999999986432 2235789999999999999999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.++||||+++++|.+++.. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++....
T Consensus 86 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 86 VYLVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG-ILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEEEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 9999999999999999864 3467899999999999999999999999 9999999999999999999999999987654
Q ss_pred CC----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 177 DG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 177 ~~----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
.. ....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.............. .....+..++.
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~ 237 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL------ADYEMPSFLSI 237 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS------SCCCCCTTSCH
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh------cccCCccccCH
Confidence 22 245689999999999888899999999999999999999999865432221111110 01123456778
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+++.+||+.||.+|||+.++++
T Consensus 238 ~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 238 EAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHcccCHhhCCCHHHHhc
Confidence 9999999999999999999999987
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=339.60 Aligned_cols=247 Identities=16% Similarity=0.186 Sum_probs=206.0
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..|.+++.||+|+||.||++.. .+|+.||+|+++.......+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 4688999999999999999995 469999999998765545677999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE---cCCCCeEEccCCCcccCCCC--C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG--K 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~DFg~a~~~~~~--~ 179 (460)
+|++|.+++.. .+.+++..+..++.|++.||.|||+++ |+|+||||+||++ +.++.+||+|||++...... .
T Consensus 89 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 89 SGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG-IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp CSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred CCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 99999998864 356899999999999999999999999 9999999999999 78899999999998765432 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||................. .........+++.+.+++.
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li~ 243 (304)
T 2jam_A 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY--EFESPFWDDISESAKDFIC 243 (304)
T ss_dssp HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC--CCCTTTTTTSCHHHHHHHH
T ss_pred cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC--CCCccccccCCHHHHHHHH
Confidence 34589999999999988899999999999999999999999876544333222111111 1122334567789999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.||.+|||+.++++
T Consensus 244 ~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 244 HLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHCSSTTTSCCHHHHHT
T ss_pred HHcCCChhHCcCHHHHhc
Confidence 999999999999999987
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=335.93 Aligned_cols=251 Identities=18% Similarity=0.245 Sum_probs=210.9
Q ss_pred HHHHhcCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEee
Q 012608 18 LKNATSGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCE 93 (460)
Q Consensus 18 ~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 93 (460)
..+..-...+|++++.||+|+||.||++... +++.||+|++.... ......+.+|+.++++++||||+++++++..
T Consensus 6 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 85 (284)
T 2vgo_A 6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD 85 (284)
T ss_dssp ----CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred CCccchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc
Confidence 3344456678999999999999999999954 58899999985431 2335789999999999999999999999999
Q ss_pred CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 94 ~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
++..++||||+++++|.+++.. .+.+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||++.
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~ 162 (284)
T 2vgo_A 86 RKRIYLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK-VIHRDIKPENLLMGYKGELKIADFGWSV 162 (284)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCEEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCHHHEEEcCCCCEEEecccccc
Confidence 9999999999999999999874 356899999999999999999999999 9999999999999999999999999987
Q ss_pred cCCC--CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 174 NSRD--GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 174 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
.... .....+++.|+|||.+.+..++.++||||||+++|+|++|..||............... ...++..++
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~ 236 (284)
T 2vgo_A 163 HAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLS 236 (284)
T ss_dssp ECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSC
T ss_pred cCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc------ccCCCCcCC
Confidence 6543 23557899999999999888999999999999999999999998765433222211111 113445677
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+.+++.+||+.||.+|||+.++++
T Consensus 237 ~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 237 DGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 89999999999999999999999987
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=349.39 Aligned_cols=247 Identities=21% Similarity=0.299 Sum_probs=191.4
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCC-CCccceeeeEEeeCC--eeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR-NNRLTNLLGCCCEGD--ERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~--~~~l 99 (460)
.+|++++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.+++++. ||||+++++++...+ ..|+
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 5689999999999999999994 56999999998654322 2567889999999996 999999999997554 6899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC--
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~-- 177 (460)
||||++ ++|.+++.. +.+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+||+|||+++....
T Consensus 89 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~-ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG-LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC-EEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 999998 689988853 57999999999999999999999999 99999999999999999999999999975432
Q ss_pred -----------------------CCCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc
Q 012608 178 -----------------------GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 233 (460)
Q Consensus 178 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~ 233 (460)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||++..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 123578999999999976 56899999999999999999999999765432221111
Q ss_pred cccccccc-----------------------------cc------------CCCCchhHHHHHHHHHHHcccCCCCCCCh
Q 012608 234 LQMLTDSC-----------------------------LE------------GQFTDDDGTELVRLASRCLQYEPRERPNP 272 (460)
Q Consensus 234 ~~~~~~~~-----------------------------~~------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 272 (460)
...+..+. .. ...+..+++++.+|+.+||+.||.+|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 10000000 00 00112456889999999999999999999
Q ss_pred hHHHH
Q 012608 273 KSLVT 277 (460)
Q Consensus 273 ~~il~ 277 (460)
.++++
T Consensus 324 ~e~l~ 328 (388)
T 3oz6_A 324 NDALK 328 (388)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 99988
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=344.49 Aligned_cols=250 Identities=19% Similarity=0.288 Sum_probs=197.4
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+..|++++.||+|+||+||+|... +|+.||||+++...... ...+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 467899999999999999999954 69999999987544222 2345689999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++ ++|.+++.. .+..+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 81 YLD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQK-VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp CCS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 998 589888865 3456999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccc---ccc-----------
Q 012608 179 KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS---CLE----------- 243 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~----------- 243 (460)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+................+ .+.
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 33467999999999876 458999999999999999999999997654332211111100000 000
Q ss_pred ----------CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 244 ----------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 244 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
....+.+++++.+|+.+||+.||.+|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0012345688999999999999999999999998
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=339.57 Aligned_cols=250 Identities=20% Similarity=0.221 Sum_probs=200.1
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+.+|++++.||+|+||+||+|... +|+.||||++....... .+.+.+|+.++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 357899999999999999999954 59999999987654332 456889999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++|++|.+++. ....+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 82 EYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKHN-CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp ECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999999998876 3466999999999999999999999999 999999999999999999999999999765532
Q ss_pred -CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc--------------------c
Q 012608 179 -KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ--------------------M 236 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------------------~ 236 (460)
....+|+.|+|||.+.+ ..++.++||||||+++|+|++|..||.+............ .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 34567899999999976 5679999999999999999999999876533221110000 0
Q ss_pred cccccccC-----CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 LTDSCLEG-----QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 ~~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...+.... ...+.+++.+.+++.+||+.||.+|||++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000 011346788999999999999999999999997
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=343.63 Aligned_cols=253 Identities=17% Similarity=0.250 Sum_probs=205.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcE----EEEEEecCCC-CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRR----IAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
-.+|++++.||+|+||.||+|.. .+|+. |++|.+.... ....+.+.+|+.++++++||||+++++++..++ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 35689999999999999999994 44554 5778776443 334778999999999999999999999997654 78
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+|+|++++++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 93 ~v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhCC-CcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999999999875 3457999999999999999999999999 999999999999999999999999999865432
Q ss_pred ------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 179 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 179 ------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||............... .....+..++
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 245 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-----ERLPQPPICT 245 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----CCCCCCTTBC
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-----CCCCCCccCC
Confidence 22345778999999998899999999999999999999 99888765433322221111 1122345677
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 246 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999988754
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-44 Score=343.10 Aligned_cols=252 Identities=18% Similarity=0.291 Sum_probs=203.1
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.++.+|++++.||+|+||.||++... +|+.||||++....... .+.+.+|+.++++++||||+++++++..++..++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 56778999999999999999999954 59999999987654332 4568899999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||++|++|.++.. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 102 v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~-ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 102 VFEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHN-IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EEECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EEecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHCC-EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 999999999988765 3457999999999999999999999999 999999999999999999999999998765432
Q ss_pred ---CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc--------------------
Q 012608 179 ---KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------------- 234 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------------------- 234 (460)
....+|+.|+|||.+.+. .++.++|||||||++|+|++|+.||.............
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 345689999999999765 68999999999999999999999987653321111000
Q ss_pred -----cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 -----QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 -----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.............+.+++.+.+|+.+||+.||.+|||+.++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000112346789999999999999999999999987
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=334.47 Aligned_cols=246 Identities=16% Similarity=0.178 Sum_probs=201.7
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.|.+.+.||+|+||.||++.. .+|..||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 588999999999999999995 4689999999876543 34688999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE---cCCCCeEEccCCCcccCCCC-
Q 012608 105 PNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 105 ~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~DFg~a~~~~~~- 178 (460)
+|++|.+.+... ....+++..++.++.|++.||.|||+++ |+||||||+||++ +.++.+||+|||++......
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH-VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC-EEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 999999988542 2467999999999999999999999999 9999999999999 45678999999999765432
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....+|+.|+|||.+. ..++.++||||||+++|+|++|..||................... .......++.+.+
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 257 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY---AVECRPLTPQAVD 257 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---CC--CCCCHHHHH
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccc---ccccCcCCHHHHH
Confidence 3456899999999986 568899999999999999999999997765443332221111110 1112235688999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||+.||.+|||+.++++
T Consensus 258 li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 258 LLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHccCChhhCcCHHHHhc
Confidence 999999999999999999987
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=342.46 Aligned_cols=248 Identities=15% Similarity=0.141 Sum_probs=205.0
Q ss_pred ccchh-cccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC--CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIV-SEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP--DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.|.+. +.||+|+||.||++... +|+.||+|+++..... ....+.+|+.+++++ +||||+++++++...+..++||
T Consensus 29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~ 108 (327)
T 3lm5_A 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL 108 (327)
T ss_dssp HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence 35565 78999999999999954 6999999998754332 367899999999999 5799999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCcccCCCC
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~~~~~ 178 (460)
||++|++|.+++.......+++..++.++.|++.||.|||+++ |+||||||+|||++. ++.+||+|||++......
T Consensus 109 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g-ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 109 EYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN-IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp ECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC-eecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 9999999999986555678999999999999999999999999 999999999999987 789999999999876543
Q ss_pred ---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....||+.|+|||.+.+..++.++|||||||++|+|++|..||................ ..........+++.+.
T Consensus 188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~ 265 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN--VDYSEETFSSVSQLAT 265 (327)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTTTTTSCHHHH
T ss_pred cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc--cccCchhhcccCHHHH
Confidence 34578999999999998889999999999999999999999987654433222211111 1112233446778999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||+.++++
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHcCCChhhCcCHHHHhC
Confidence 9999999999999999999987
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=341.20 Aligned_cols=246 Identities=19% Similarity=0.192 Sum_probs=198.4
Q ss_pred ccchh-cccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIV-SEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~-~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|+++ +.||+|+||.||++. ..+|+.||||++..........+.+|+.++.++ +||||+++++++..++..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 47775 679999999999999 457999999999876666678899999999995 799999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC---eEEccCCCcccCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~DFg~a~~~~~~-- 178 (460)
++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG-IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999974 356899999999999999999999999 999999999999987765 999999998754321
Q ss_pred ---------CCccCCCcccCcccccc-----CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh-----------hhcc
Q 012608 179 ---------KSYSTNLAFTPPEYLRT-----GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-----------RDRN 233 (460)
Q Consensus 179 ---------~~~~~t~~y~aPE~~~~-----~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~-----------~~~~ 233 (460)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||........ ....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 23458999999999875 4588999999999999999999999865421100 0000
Q ss_pred ccccccccccCCCC----chhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 LQMLTDSCLEGQFT----DDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 ~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
........ ..++ ..+++.+.+++.+||+.||.+|||+.++++
T Consensus 250 ~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 250 FESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00000000 0111 245688999999999999999999999998
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=342.52 Aligned_cols=245 Identities=16% Similarity=0.140 Sum_probs=208.4
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
....|.+++.||+|+||.||++... +++.||+|++...... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3467899999999999999999954 5889999998754332 24678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||++|++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 119 v~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999998864 357899999999999999999999999 999999999999999999999999998765422
Q ss_pred ---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....+|+.|+|||++.+..++.++||||||+++|+|++|..||............... ...++..+++.+.
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 269 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAA 269 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT------CCCCCTTSCHHHH
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC------CCCCCccCCHHHH
Confidence 3456899999999999888999999999999999999999998765433222111110 1123456678999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||+.++++
T Consensus 270 ~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 270 SLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHccCChhHCcCHHHHhc
Confidence 9999999999999999999987
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-44 Score=335.15 Aligned_cols=242 Identities=17% Similarity=0.194 Sum_probs=204.7
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.+|++++.||+|+||.||+|... +|+.||||+++...... ...+.+|+..+.++ +||||+++++++..++..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 45889999999999999999964 79999999998654333 56788999999999 9999999999999999999999
Q ss_pred EcCCCCCHHhhhhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC------------------
Q 012608 102 EYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED------------------ 161 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~------------------ 161 (460)
||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEC--------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 9999999999986432 256899999999999999999999999 9999999999999844
Q ss_pred -CCeEEccCCCcccCCCCCCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhh-hhhhhccccccc
Q 012608 162 -GNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLT 238 (460)
Q Consensus 162 -~~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~ 238 (460)
..+||+|||.+..........+|+.|+|||.+.+. .++.++|||||||++|+|++|.+++..... ..+...
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~------ 243 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQG------ 243 (289)
T ss_dssp CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTT------
T ss_pred ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcC------
Confidence 47999999999988777777899999999999765 466799999999999999999976543321 111111
Q ss_pred cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.....+..+++.+.+++.+||+.||.+|||+.++++
T Consensus 244 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 244 ---RLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ---CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 112345567789999999999999999999999987
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=345.20 Aligned_cols=241 Identities=18% Similarity=0.232 Sum_probs=180.6
Q ss_pred hcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEEEcCCCCC
Q 012608 31 VSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMPNET 108 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~g~s 108 (460)
.+.||+|+||.||++.. .+|+.||||++... ....+.+|+.+++.+. ||||+++++++..++..++||||++|++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 47899999999999995 46999999998653 3567889999999996 9999999999999999999999999999
Q ss_pred HHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC---CeEEccCCCcccCCCC----CCc
Q 012608 109 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLSTFGLMKNSRDG----KSY 181 (460)
Q Consensus 109 L~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~DFg~a~~~~~~----~~~ 181 (460)
|.+++.. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++ .+||+|||++...... ...
T Consensus 93 L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 169 (325)
T 3kn6_A 93 LFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG-VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP 169 (325)
T ss_dssp HHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccccc
Confidence 9999974 467999999999999999999999999 99999999999997665 7999999999865433 345
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc---cccccccc--cccCCCCchhHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR---NLQMLTDS--CLEGQFTDDDGTELVR 256 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~l~~ 256 (460)
.+|+.|+|||++.+..++.++|||||||++|+|++|..||........... ....+... .........+++++.+
T Consensus 170 ~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 249 (325)
T 3kn6_A 170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249 (325)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHH
T ss_pred CCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHH
Confidence 678999999999988899999999999999999999999875432110000 00000000 0111111346789999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||+.||.+|||+.++++
T Consensus 250 li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 250 LIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHHHCCCChhHCCCHHHHhc
Confidence 999999999999999999976
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=337.16 Aligned_cols=247 Identities=18% Similarity=0.282 Sum_probs=207.8
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee-----------
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----------- 93 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------- 93 (460)
.+|++++.||+|+||.||+|... +|+.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 35788999999999999999965 79999999997543 467899999999999999999998854
Q ss_pred -----CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEcc
Q 012608 94 -----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLST 168 (460)
Q Consensus 94 -----~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~D 168 (460)
....++||||+++++|.+++.......+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK-LINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECC
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCHHHEEEcCCCCEEECc
Confidence 345899999999999999997655568999999999999999999999999 99999999999999999999999
Q ss_pred CCCcccCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCC
Q 012608 169 FGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245 (460)
Q Consensus 169 Fg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (460)
||++...... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+...... .. .+ ....
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-~~-----~~----~~~~ 235 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF-FT-----DL----RDGI 235 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH-HH-----HH----HTTC
T ss_pred chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH-HH-----Hh----hccc
Confidence 9998766543 3456899999999999888999999999999999999999776432111 10 01 1112
Q ss_pred CCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCC
Q 012608 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287 (460)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~ 287 (460)
.+..++..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 236 ~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 236 ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 344566889999999999999999999999999998876543
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-44 Score=346.51 Aligned_cols=246 Identities=18% Similarity=0.258 Sum_probs=197.2
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCC------e
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~ 96 (460)
..|++++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++++++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 4689999999999999999995 569999999986543322 467889999999999999999999997653 4
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
+|+||||+ |++|.+++.. ..+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 69999999 7999999863 56999999999999999999999999 9999999999999999999999999998755
Q ss_pred CC-CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-------------------
Q 012608 177 DG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------- 235 (460)
Q Consensus 177 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------------------- 235 (460)
.. ....+|+.|+|||++.+ ..++.++|||||||++++|++|+.||.+............
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 43 45678999999999887 6789999999999999999999999976532211111000
Q ss_pred -------ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 -------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 -------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..... .........++.+.+++.+||+.||.+|||+.++++
T Consensus 260 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 260 NYMKGLPELEKK-DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHSCCCCCC-CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHhCCCCCCC-CHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 00000 011233456789999999999999999999999998
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=336.15 Aligned_cols=254 Identities=22% Similarity=0.268 Sum_probs=205.7
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCc---EEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCee-EEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQR---RIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER-LLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~---~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~-~lv 100 (460)
.|++.+.||+|+||+||+|.. .+++ .||+|+++..... ..+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 345568899999999999984 3333 7999998764432 246789999999999999999999999766554 999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC---
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 177 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~--- 177 (460)
|||+.+++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 102 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 102 LPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK-FVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp ECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred EecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999999965 3567899999999999999999999999 99999999999999999999999999875432
Q ss_pred -----CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh-hhhhhccccccccccccCCCCchhH
Q 012608 178 -----GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 178 -----~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
.....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+..... ......... ......+..++
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 254 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ-----GRRLPQPEYCP 254 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHT-----TCCCCCCTTCC
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhc-----CCCCCCCccch
Confidence 2344568899999999988899999999999999999997666543321 111111111 11122345567
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHHHhccccccCC
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~ 287 (460)
+.+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 255 ~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 255 DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999876543
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=344.79 Aligned_cols=244 Identities=20% Similarity=0.291 Sum_probs=199.8
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCC--CccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRN--NRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~ 101 (460)
..|++++.||+|+||.||++...+++.||||++....... .+.+.+|+.++++++| |||+++++++..++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 5689999999999999999998889999999987654332 4678999999999976 99999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
|+ .+++|.+++.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||++......
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 57899999974 467999999999999999999999999 99999999999997 578999999999865432
Q ss_pred ---CCccCCCcccCcccccc-----------CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccC
Q 012608 179 ---KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~-----------~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (460)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......... ...........
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH---HHHHhcCCccc
Confidence 24568999999999864 56888999999999999999999998653221110 11111222233
Q ss_pred CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.++...+.++.+++.+||+.||.+|||+.++++
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 445556688999999999999999999999997
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=347.66 Aligned_cols=255 Identities=18% Similarity=0.167 Sum_probs=199.4
Q ss_pred cccchhcccCCCCCCeEEEEEEc----CCcEEEEEEecCCCCC-----------CHHHHHHHHHHHhcCCCCccceeeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWP-----------DPRQFLEEARSVGQLRNNRLTNLLGC 90 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~~iv~~~~~ 90 (460)
.+|++++.||+|+||.||+|... ++..||||++...... ....+.+|+.+++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57899999999999999999964 5788999998765422 12347788899999999999999999
Q ss_pred Eee----CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC--Ce
Q 012608 91 CCE----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG--NP 164 (460)
Q Consensus 91 ~~~----~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~--~~ 164 (460)
+.. .+..++||||+ |++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHENE-YVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeCCCcCHHHEEEccCCCCcE
Confidence 987 67899999999 9999999864 337999999999999999999999999 99999999999998777 99
Q ss_pred EEccCCCcccCCCC-----------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh----
Q 012608 165 RLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---- 229 (460)
Q Consensus 165 kl~DFg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~---- 229 (460)
||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|+||..||........
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999755321 344689999999999988899999999999999999999999854221111
Q ss_pred -hhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 230 -RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
....................+++++.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111111111000000112566899999999999999999999999999988754
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-44 Score=355.23 Aligned_cols=254 Identities=18% Similarity=0.231 Sum_probs=187.8
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeC-----Cee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 97 (460)
.+|++++.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.+|++++||||+++++++... +..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 4699999999999999999994 46999999999754332 246789999999999999999999998543 568
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
|+||||+. ++|.+++. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~-iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSAG-ILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC-cCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999985 78999886 3567999999999999999999999999 99999999999999999999999999986532
Q ss_pred -------------------------------CCCccCCCcccCcccc-ccCCCCCCCceehHHHHHHHHhh---------
Q 012608 178 -------------------------------GKSYSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLS--------- 216 (460)
Q Consensus 178 -------------------------------~~~~~~t~~y~aPE~~-~~~~~~~~sDi~slG~~l~el~t--------- 216 (460)
.....||+.|+|||++ .+..++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1234679999999986 45569999999999999999999
Q ss_pred --CCCCCCChhhhhhh--------------------hcc-----------------------ccccc--cccccCCCCch
Q 012608 217 --GKHIPPSHALDLIR--------------------DRN-----------------------LQMLT--DSCLEGQFTDD 249 (460)
Q Consensus 217 --g~~p~~~~~~~~~~--------------------~~~-----------------------~~~~~--~~~~~~~~~~~ 249 (460)
|+++|++....... ... ...+. .........+.
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 56566543210000 000 00000 00000112234
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.++++.+||.+||+.||.+|||++++++ .++...
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~--Hp~f~~ 402 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLA--HPFFKE 402 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGTT
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhc--CHhhhh
Confidence 5789999999999999999999999998 555544
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=360.63 Aligned_cols=248 Identities=18% Similarity=0.247 Sum_probs=209.1
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
-....|++++.||+|+||.||+++. .+|+.||+|++.... ......+.+|+.++++++||||+++++++...+..|
T Consensus 182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~ 261 (543)
T 3c4z_A 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLC 261 (543)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEE
Confidence 4567889999999999999999996 469999999986432 234577899999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 99 LVAEYMPNETLAKHLFHWE--THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
+||||++|++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++...
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g-IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN-IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC-CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999999886533 456999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh----hhhhhccccccccccccCCCCc
Q 012608 177 DG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 177 ~~----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
.. ....||+.|+|||++.+..++.++|||||||++|||+||..||..... ..+...... ....++.
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~------~~~~~p~ 414 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE------QAVTYPD 414 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH------CCCCCCT
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh------cccCCCc
Confidence 33 235799999999999988899999999999999999999999976421 111111111 1123456
Q ss_pred hhHHHHHHHHHHHcccCCCCCCCh-----hHHHH
Q 012608 249 DDGTELVRLASRCLQYEPRERPNP-----KSLVT 277 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~-----~~il~ 277 (460)
.+++.+.++|.+||+.||.+||++ .++++
T Consensus 415 ~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 415 KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 778999999999999999999975 56664
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=348.74 Aligned_cols=256 Identities=15% Similarity=0.134 Sum_probs=206.5
Q ss_pred cccchhcccCCCCCCeEEEEEEc---------CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccce----------
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE---------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTN---------- 86 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~---------- 86 (460)
..|++++.||+|+||.||+|... +++.||||++... +.+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57899999999999999999964 3789999998754 46889999999999999987
Q ss_pred -----eeeEEee-CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC
Q 012608 87 -----LLGCCCE-GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160 (460)
Q Consensus 87 -----~~~~~~~-~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~ 160 (460)
+++++.. ++..++||||+ |++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE-YVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCCHHHEEEcC
Confidence 6777766 67889999999 899999997644578999999999999999999999999 999999999999999
Q ss_pred CC--CeEEccCCCcccCCCC-----------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChh--
Q 012608 161 DG--NPRLSTFGLMKNSRDG-----------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA-- 225 (460)
Q Consensus 161 ~~--~~kl~DFg~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~-- 225 (460)
++ .+||+|||+++..... ....||+.|+|||.+.+..++.++|||||||++|+|++|+.||....
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 88 8999999999754422 23478999999999998889999999999999999999999986542
Q ss_pred hhhhhhcc---ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 226 LDLIRDRN---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 226 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
........ ................+++++.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 11111100 0000000000111124578999999999999999999999999999998766543
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-44 Score=336.21 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=208.6
Q ss_pred Ccccchhc-ccCCCCCCeEEEEEE---cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 25 FAVENIVS-EHGEKAPNVVYKGKL---ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 25 f~~~~i~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
...|.+.+ .||+|+||.||+|.. .+++.||||+++...... .+.+.+|+.++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35688888 999999999999963 347899999997654333 56799999999999999999999998 567789
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++|++|.+++.. ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 94 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC-eEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 99999999999999974 456999999999999999999999999 999999999999999999999999998866443
Q ss_pred C-------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 179 K-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 179 ~-------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
. ...+++.|+|||.+.+..++.++||||||+++|+|+| |..||............... .....+..+
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~ 245 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----ERMGCPAGC 245 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTC
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCC
Confidence 2 2335688999999988889999999999999999999 99888765433322221111 112345567
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
++.+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 246 ~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 246 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999887643
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=342.07 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=210.0
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
..|++.+.||+|+||.||+|... +++.||||++...... ....+.+|+.++++++||||+++++++..++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 104 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence 56889999999999999999843 4788999998754322 2456899999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCC
Q 012608 99 LVAEYMPNETLAKHLFHWE--------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 170 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg 170 (460)
+||||++|++|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC-CccCCCccceEEEcCCCeEEECcCc
Confidence 9999999999999986421 146789999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcccccccccccc
Q 012608 171 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 171 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
++...... ....+|+.|+|||.+.+..++.++||||||+++|+|++ |..||................ .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----~ 258 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-----L 258 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-----C
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC-----c
Confidence 98755332 23345788999999988889999999999999999999 777776544333222211111 1
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
...+..++..+.+++.+||+.||.+|||+.++++.|+....
T Consensus 259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 12345677899999999999999999999999999988754
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=333.33 Aligned_cols=245 Identities=16% Similarity=0.138 Sum_probs=208.4
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
....|.+.+.||+|+||.||++... +++.||+|++....... .+.+.+|+.++++++||||+++++++..++..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 3467899999999999999999954 58899999987543322 4678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC--
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~-- 177 (460)
||||++|++|.+++.. ...+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++.....
T Consensus 93 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR-VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999998864 357899999999999999999999999 99999999999999999999999999876542
Q ss_pred --CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 178 --GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 178 --~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
.....+|+.|+|||.+.+..++.++||||||+++|+|++|..||............... ....+..+++.+.
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 243 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAA 243 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHH
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc------cCCCccccCHHHH
Confidence 23456899999999998888999999999999999999999998765433222111111 1123456678999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||+.++++
T Consensus 244 ~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 244 SLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp HHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHcccChhhCcCHHHHhh
Confidence 9999999999999999999997
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=342.90 Aligned_cols=253 Identities=18% Similarity=0.239 Sum_probs=196.1
Q ss_pred HhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 21 ATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 21 ~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
....+.+|++++.||+|+||+||++.. .+|+.||||+++...... .+.+.+|+.++++++||||+++++++..++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 345677899999999999999999994 569999999997554332 45688999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc-----CCCCeEEccCCCc
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-----EDGNPRLSTFGLM 172 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~-----~~~~~kl~DFg~a 172 (460)
++||||++ ++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++
T Consensus 109 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 109 HLIFEYAE-NDLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRR-CLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEEECCS-EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEEecCC-CCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 99999998 599998874 456999999999999999999999999 99999999999994 4556999999998
Q ss_pred ccCCCC----CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc--c------
Q 012608 173 KNSRDG----KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--D------ 239 (460)
Q Consensus 173 ~~~~~~----~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~--~------ 239 (460)
...... ....+|+.|+|||++.+.. ++.++|||||||++|+|++|..||................. .
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhh
Confidence 765422 3446799999999998744 79999999999999999999999876533221111110000 0
Q ss_pred ----ccccC------------CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 ----SCLEG------------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 ----~~~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+.. ..+..+++++.+||.+||+.||.+|||+.++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000 011125688999999999999999999999988
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=342.03 Aligned_cols=256 Identities=20% Similarity=0.215 Sum_probs=199.4
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC-----HHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-----PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
....|++++.||+|+||.||+|.. .+|+.||||+++...... .+.+.+|+.++++++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 346788999999999999999995 469999999987543221 34788999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||+++ +|.+++.. ....+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++.....
T Consensus 88 ~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164 (346)
T ss_dssp EEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred EEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC-EECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence 999999985 88888864 3456889999999999999999999999 99999999999999999999999999986543
Q ss_pred C----CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc--------------c
Q 012608 178 G----KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------------T 238 (460)
Q Consensus 178 ~----~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--------------~ 238 (460)
. ....+|+.|+|||.+.+. .++.++|||||||++|+|++|.+||.+.............. .
T Consensus 165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (346)
T 1ua2_A 165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244 (346)
T ss_dssp CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence 2 345689999999999764 47889999999999999999998887654322211111000 0
Q ss_pred cccccC--------CCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 239 DSCLEG--------QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 239 ~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+..... ......+.++.++|.+||+.||.+|||+.++++ ..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--h~~f~ 296 (346)
T 1ua2_A 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK--MKYFS 296 (346)
T ss_dssp TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT--SGGGT
T ss_pred ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc--Chhhh
Confidence 000000 011345689999999999999999999999998 44443
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-44 Score=336.66 Aligned_cols=256 Identities=24% Similarity=0.293 Sum_probs=205.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcC----CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEe-eCCee
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCC-EGDER 97 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~ 97 (460)
+...|++.+.||+|+||+||+|...+ +..||+|.++..... ..+.+.+|+.++++++||||+++++++. .++..
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 34568889999999999999998532 235899998764322 2467899999999999999999999864 45678
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 103 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~-i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999964 3456899999999999999999999999 99999999999999999999999999876543
Q ss_pred C--------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCC-CCChhhhhhhhccccccccccccCCCCc
Q 012608 178 G--------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 178 ~--------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
. ....+|+.|+|||.+.+..++.++||||||+++|+|++|..| +............... .....+.
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 255 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-----RRLLQPE 255 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTT-----CCCCCCT
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcC-----CCCCCCc
Confidence 2 234567889999999988899999999999999999995544 4332221111111111 1112344
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 256 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 256 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 56789999999999999999999999999999887654
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-44 Score=345.54 Aligned_cols=248 Identities=20% Similarity=0.179 Sum_probs=199.0
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC-----CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM-----AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.|++++.||+|+||.||+|.. .+++.||+|++... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 106 (345)
T 3hko_A 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV 106 (345)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEE
Confidence 588899999999999999995 56899999998643 233467899999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhcc--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHh
Q 012608 101 AEYMPNETLAKHLFHW--------------------------------------ETHPMKWAMRLRVVLHLAQALEYCTS 142 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~--------------------------------------~~~~~~~~~~~~i~~qi~~~l~~lH~ 142 (460)
|||++|++|.+++... ....+++..++.++.||+.||.|||+
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 186 (345)
T 3hko_A 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186 (345)
T ss_dssp EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988421 01123577888999999999999999
Q ss_pred CCCcccccccCCcEEEcCCC--CeEEccCCCcccCCC--------CCCccCCCcccCcccccc--CCCCCCCceehHHHH
Q 012608 143 KGRALYHDLNAYRILFDEDG--NPRLSTFGLMKNSRD--------GKSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTL 210 (460)
Q Consensus 143 ~~~iiH~Dikp~Nill~~~~--~~kl~DFg~a~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~ 210 (460)
++ |+||||||+|||++.++ .+||+|||++..... .....||+.|+|||.+.+ ..++.++|||||||+
T Consensus 187 ~~-ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 187 QG-ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp TT-EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred CC-ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 99 99999999999998766 899999999875432 234568999999999975 568899999999999
Q ss_pred HHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 211 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 211 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+|+|++|..||................. .........+++.+.++|.+||+.||.+|||+.++++
T Consensus 266 l~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 266 LHLLLMGAVPFPGVNDADTISQVLNKKL--CFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCC--CTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHCCCCCCCCChHHHHHHHHhccc--ccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 9999999999876544322222111111 0111112246789999999999999999999999998
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=334.17 Aligned_cols=242 Identities=18% Similarity=0.270 Sum_probs=207.6
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.|++++.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 488999999999999999985 5699999999976543 34678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~ 180 (460)
+|++|.+++. .+.+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 103 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEK-KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp TTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999999984 467999999999999999999999999 999999999999999999999999998765433 34
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
..+|+.|+|||.+.+..++.++||||||+++|+|++|..||.............. ......+..++..+.+++.+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK-----NNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-----SCCCCCCSSCCHHHHHHHHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc-----CCCCCCccccCHHHHHHHHH
Confidence 5689999999999988899999999999999999999998865433222111110 11123445677899999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
||+.||.+|||+.++++
T Consensus 254 ~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLK 270 (303)
T ss_dssp HCCSSGGGSCCHHHHTT
T ss_pred HcCCChhhCcCHHHHhh
Confidence 99999999999999987
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=347.81 Aligned_cols=254 Identities=24% Similarity=0.301 Sum_probs=197.9
Q ss_pred ccchhcccCCCCCCeEEEEEEc--CC--cEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEee-CCeeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE--NQ--RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 100 (460)
.|++.+.||+|+||.||+|... ++ ..||+|.++..... ..+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4677889999999999999843 22 46899998754332 35689999999999999999999998754 4678999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|||++|++|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC-EecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999964 3456889999999999999999999999 999999999999999999999999998754322
Q ss_pred ------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 179 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 179 ------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
....+|+.|+|||.+.+..++.++|||||||++|+|+| |.+||............... .....+..++
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~-----~~~~~p~~~~ 322 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG-----RRLLQPEYCP 322 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTT-----CCCCCCTTCC
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCC
Confidence 23345778999999998899999999999999999999 55555433221111111110 1112345677
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHHHhccccccCC
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~ 287 (460)
..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 323 ~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 323 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 899999999999999999999999999998876543
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=338.16 Aligned_cols=267 Identities=21% Similarity=0.284 Sum_probs=203.3
Q ss_pred cCHHHHHHHhcC----CcccchhcccCCCCCCeEEEEEEc----CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCC
Q 012608 13 FTLEQLKNATSG----FAVENIVSEHGEKAPNVVYKGKLE----NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNN 82 (460)
Q Consensus 13 ~~~~~~~~~~~~----f~~~~i~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~ 82 (460)
-+.+|+...... ...|.+.+.||+|+||.||+|... ++..||+|+++...... .+.+.+|+.++++++||
T Consensus 17 ~~~eel~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ 96 (313)
T 3brb_A 17 RGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96 (313)
T ss_dssp -------CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCT
T ss_pred CchHhhhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCC
Confidence 344444443333 357899999999999999999843 35589999987654332 46789999999999999
Q ss_pred ccceeeeEEeeCC-----eeEEEEEcCCCCCHHhhhhc----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccC
Q 012608 83 RLTNLLGCCCEGD-----ERLLVAEYMPNETLAKHLFH----WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153 (460)
Q Consensus 83 ~iv~~~~~~~~~~-----~~~lv~e~~~g~sL~~~~~~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp 153 (460)
||+++++++...+ ..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+++ |+||||||
T Consensus 97 ~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp 175 (313)
T 3brb_A 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-FLHRDLAA 175 (313)
T ss_dssp TBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCSG
T ss_pred CeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCc
Confidence 9999999987654 35999999999999998843 13467999999999999999999999999 99999999
Q ss_pred CcEEEcCCCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhh
Q 012608 154 YRILFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHAL 226 (460)
Q Consensus 154 ~Nill~~~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~ 226 (460)
+||+++.++.+||+|||++...... ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus 176 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 255 (313)
T 3brb_A 176 RNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN 255 (313)
T ss_dssp GGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred ceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH
Confidence 9999999999999999998765432 23456788999999998889999999999999999999 7777765433
Q ss_pred hhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 227 DLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
........... ....+..+++.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 256 ~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 256 HEMYDYLLHGH-----RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp GGHHHHHHTTC-----CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-----CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 32222211111 1233456778999999999999999999999999999988654
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=345.45 Aligned_cols=243 Identities=19% Similarity=0.248 Sum_probs=200.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..|++++.||+|+||.||++.. .+|+.||||+++.... ...+|++++.++ +||||+++++++..++..|+||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 4589999999999999999995 4699999999976543 235688888888 799999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC----CCeEEccCCCcccCCCC-
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED----GNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~----~~~kl~DFg~a~~~~~~- 178 (460)
++|++|.+++.. .+.+++..+..++.||+.||.|||++| |+||||||+|||+.+. +.+||+|||+++.....
T Consensus 98 ~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~g-ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 98 MKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQG-VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 999999998873 467999999999999999999999999 9999999999998533 34999999999865433
Q ss_pred ---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChh---hhhhhhccccccccccccCCCCchhHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....+|+.|+|||++.+..++.++|||||||++|+|++|..||.... ...+....... ........+..+++
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~ 252 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG--KFSLSGGYWNSVSD 252 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHC--CCCCCSTTTTTSCH
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccC--CcccCccccccCCH
Confidence 34568999999999988778999999999999999999999986531 11111111110 11112233456788
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||.+||+.||.+|||+.++++
T Consensus 253 ~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 253 TAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhc
Confidence 9999999999999999999999987
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=340.36 Aligned_cols=253 Identities=17% Similarity=0.255 Sum_probs=201.0
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC--CCCccceeeeEEeeC----CeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL--RNNRLTNLLGCCCEG----DERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~~iv~~~~~~~~~----~~~~l 99 (460)
.+|++++.||+|+||.||+|... |+.||||++.... ...+.+|.+++..+ +||||+++++++... +..++
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 46889999999999999999974 8999999986432 45566677777665 899999999999877 68899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK--------GRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
||||++|++|.+++.. ..+++..++.++.|++.||.|||++ + |+||||||+|||++.++.+||+|||+
T Consensus 113 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp EECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC-EECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-EEecccchHHEEECCCCCEEEEeCCC
Confidence 9999999999999953 4699999999999999999999998 8 99999999999999999999999999
Q ss_pred cccCCCC--------CCccCCCcccCccccccCCCCCC------CceehHHHHHHHHhhC----------CCCCCChhh-
Q 012608 172 MKNSRDG--------KSYSTNLAFTPPEYLRTGRVTPE------SVIYSFGTLLLDLLSG----------KHIPPSHAL- 226 (460)
Q Consensus 172 a~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~------sDi~slG~~l~el~tg----------~~p~~~~~~- 226 (460)
+...... ....||+.|+|||++.+...+.. +|||||||++|||+|| ..||.....
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 268 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence 8755432 24578999999999987766655 9999999999999999 545433211
Q ss_pred ----hhhhhcc-ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 227 ----DLIRDRN-LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 227 ----~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
....... ................+++++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 269 DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 0011100 11111111111112367888999999999999999999999999999887654
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=339.15 Aligned_cols=258 Identities=18% Similarity=0.220 Sum_probs=202.9
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEee------
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE------ 93 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 93 (460)
+.+.+|++++.||+|+||.||+|.. .+|+.||||++...... ....+.+|+.++++++||||+++++++..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 4567899999999999999999995 57999999998655432 25678899999999999999999999876
Q ss_pred --CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 94 --GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 94 --~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
.+..++||||++| +|.+.+.. ....+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred cCCceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeCCCCCHHHEEEcCCCCEEEccchh
Confidence 3468999999984 77777754 3456999999999999999999999999 99999999999999999999999999
Q ss_pred cccCCC--------CCCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc---ccc
Q 012608 172 MKNSRD--------GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM---LTD 239 (460)
Q Consensus 172 a~~~~~--------~~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~ 239 (460)
+..... .....||+.|+|||++.+ ..++.++|||||||++|+|+||..||.+............. ...
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 876432 134467899999999876 45799999999999999999999998765433221111000 000
Q ss_pred cccc--------------CCCCc---------hhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 240 SCLE--------------GQFTD---------DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 240 ~~~~--------------~~~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.... ..... ..++.+.+||.+||+.||.+|||+.++++ .++...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~~ 317 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFWS 317 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGGS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC--CCCcCC
Confidence 0000 00000 02567899999999999999999999998 445443
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=343.44 Aligned_cols=257 Identities=19% Similarity=0.304 Sum_probs=209.6
Q ss_pred cccchhcccCCCCCCeEEEEEE-----cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCC--eeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-----ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~ 98 (460)
..|++++.||+|+||.||++.. .+|+.||||++........+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4588999999999999999983 358999999998765445678999999999999999999999986543 689
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 121 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp EEECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EEEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 99999999999999975 3356999999999999999999999999 999999999999999999999999999876543
Q ss_pred C-------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh---c--------cccccccc
Q 012608 179 K-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD---R--------NLQMLTDS 240 (460)
Q Consensus 179 ~-------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~---~--------~~~~~~~~ 240 (460)
. ...++..|+|||.+.+..++.++||||||+++|+|+||..|+.......... . ........
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 2 2345678999999988889999999999999999999998775432211110 0 00000111
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
......+..++.++.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11123355678899999999999999999999999999988754
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-44 Score=347.23 Aligned_cols=243 Identities=20% Similarity=0.288 Sum_probs=198.7
Q ss_pred ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCC--CCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.|++++.||+|+||.||++...+|+.||||++...... ..+.+.+|+.++++++ ||||+++++++..++..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 48999999999999999999777999999998765433 2467899999999996 5999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
+.+++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 137 -~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~-ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 137 -CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp -CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTTT-CCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred -cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 567899999874 457889999999999999999999999 99999999999996 588999999999865432
Q ss_pred --CCccCCCcccCcccccc-----------CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCC
Q 012608 179 --KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~-----------~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (460)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||......... ............
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~---~~~~~~~~~~~~ 288 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEIE 288 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH---HHHHHCTTSCCC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH---HHHHhCccccCC
Confidence 34568999999999865 35888999999999999999999998653211100 011111122223
Q ss_pred CCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++...+.++.+||.+||+.||.+|||+.++++
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 44455688999999999999999999999987
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=357.27 Aligned_cols=246 Identities=16% Similarity=0.218 Sum_probs=193.2
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeC------Ce
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 96 (460)
.+|++++.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++... ..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 5688999999999999999984 46999999999754222 256788999999999999999999999654 35
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.|+||||+++ +|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 142 ~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 7999999985 5666663 34899999999999999999999999 9999999999999999999999999998765
Q ss_pred CC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccc--------------
Q 012608 177 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD-------------- 239 (460)
Q Consensus 177 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-------------- 239 (460)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.............+..
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 43 4567899999999999989999999999999999999999999765322111111000000
Q ss_pred -----------ccccCCCCc-----------hhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 240 -----------SCLEGQFTD-----------DDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 240 -----------~~~~~~~~~-----------~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......++. ..++++.+||.+||+.||.+|||++++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000111 12678999999999999999999999998
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=339.58 Aligned_cols=255 Identities=18% Similarity=0.219 Sum_probs=206.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee----CCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~l 99 (460)
-..|++++.||+|+||.||++.. .+|+.||||++........+.+.+|+.++++++||||+++++++.. .+..++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46799999999999999999995 6799999999876544456789999999999999999999999863 346889
Q ss_pred EEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 100 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
||||+++++|.+++... ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG-YAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999999988642 3467999999999999999999999999 99999999999999999999999998876432
Q ss_pred C-------------CCccCCCcccCccccccCC---CCCCCceehHHHHHHHHhhCCCCCCChhhh--hhhhcccccccc
Q 012608 178 G-------------KSYSTNLAFTPPEYLRTGR---VTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDRNLQMLTD 239 (460)
Q Consensus 178 ~-------------~~~~~t~~y~aPE~~~~~~---~~~~sDi~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~ 239 (460)
. ....||+.|+|||.+.+.. ++.++||||||+++|+|++|..||...... ........
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---- 262 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN---- 262 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC----
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc----
Confidence 1 1234689999999987544 688999999999999999999887532111 00000000
Q ss_pred ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
......+..+++.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 263 -~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 263 -QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp -C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred -cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 111122345678999999999999999999999999999988643
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-44 Score=346.07 Aligned_cols=249 Identities=18% Similarity=0.189 Sum_probs=201.6
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-----CCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----NNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~l 99 (460)
..|+++++||+|+||.||+|.. .+|+.||||+++... .....+..|+.+++.+. ||||+++++++...+..++
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l 113 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL 113 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence 3578899999999999999995 568999999986422 22456788999999996 9999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-------------------
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE------------------- 160 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~------------------- 160 (460)
||||+ |++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.
T Consensus 114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS-LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCcccEEEccccccccccchhcccccccc
Confidence 99999 899999998655567999999999999999999999999 999999999999975
Q ss_pred ------CCCeEEccCCCcccCCC-CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc
Q 012608 161 ------DGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN 233 (460)
Q Consensus 161 ------~~~~kl~DFg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~ 233 (460)
++.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||............
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 271 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 78899999999986544 34567899999999999989999999999999999999999998654322111100
Q ss_pred ccc---cc-----------------cc----cccCCC----------------CchhHHHHHHHHHHHcccCCCCCCChh
Q 012608 234 LQM---LT-----------------DS----CLEGQF----------------TDDDGTELVRLASRCLQYEPRERPNPK 273 (460)
Q Consensus 234 ~~~---~~-----------------~~----~~~~~~----------------~~~~~~~l~~li~~~l~~~p~~Rps~~ 273 (460)
... .. .. .++... ....++.+.+|+.+||+.||.+|||+.
T Consensus 272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~ 351 (360)
T 3llt_A 272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA 351 (360)
T ss_dssp HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence 000 00 00 000000 001126788999999999999999999
Q ss_pred HHHH
Q 012608 274 SLVT 277 (460)
Q Consensus 274 ~il~ 277 (460)
++++
T Consensus 352 elL~ 355 (360)
T 3llt_A 352 ELLK 355 (360)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9986
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=333.06 Aligned_cols=245 Identities=19% Similarity=0.189 Sum_probs=202.0
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC----CCCHHHHHHHHHHHhcCCCCccceeeeEEe--eCCee
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRNNRLTNLLGCCC--EGDER 97 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~ 97 (460)
..+|++++.||+|+||.||++.. .+++.||+|+++... ....+.+.+|+.++++++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 45789999999999999999995 568999999986532 233578999999999999999999999984 45678
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
++||||++++ |.+++.......+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~-i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG-IVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC-eeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 9999999865 777776656678999999999999999999999999 99999999999999999999999999876542
Q ss_pred C------CCccCCCcccCccccccCC--CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 178 G------KSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 178 ~------~~~~~t~~y~aPE~~~~~~--~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
. ....+|+.|+|||++.+.. .+.++||||||+++|+|++|..||............... ....+..
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~~ 235 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------SYAIPGD 235 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------CCCCCSS
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------CCCCCCc
Confidence 2 2456899999999987644 477999999999999999999998765443322221111 1124456
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+.+++.+||+.||.+|||+.++++
T Consensus 236 ~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 7789999999999999999999999997
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=357.18 Aligned_cols=246 Identities=20% Similarity=0.203 Sum_probs=205.2
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
..|++++.||+|+||+||++.. .+|+.||||++.... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 3689999999999999999995 469999999986432 3346789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc---CCCCeEEccCCCcccCCCC-
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~---~~~~~kl~DFg~a~~~~~~- 178 (460)
|++|++|.+.+.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||++......
T Consensus 102 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 9999999998864 357999999999999999999999999 99999999999995 5567999999999865443
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+................ ........+++++.+
T Consensus 179 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 255 (486)
T 3mwu_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA--FDLPQWRTISDDAKD 255 (486)
T ss_dssp ---CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--SCSGGGGGSCHHHHH
T ss_pred ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCCcccCCCCHHHHH
Confidence 34578999999999874 5899999999999999999999999776443332221111110 011112356789999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
+|.+||+.||.+|||+.++++
T Consensus 256 li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 256 LIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHhc
Confidence 999999999999999999998
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=330.23 Aligned_cols=246 Identities=19% Similarity=0.171 Sum_probs=204.1
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.+|++++.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 46889999999999999999954 6999999998754433 357899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC------
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 177 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~------ 177 (460)
++|++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 99999999886 3457999999999999999999999999 99999999999999999999999999875432
Q ss_pred CCCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 178 GKSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 178 ~~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
.....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||............... ..........+++.+.+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---KKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT---TCTTSTTGGGSCHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh---cccccCchhhcCHHHHH
Confidence 234568999999999987665 77999999999999999999998654321110000000 00011122356789999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||+.||.+|||+.++++
T Consensus 241 li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHCCCCchhCCCHHHHhc
Confidence 999999999999999999987
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-44 Score=346.08 Aligned_cols=250 Identities=19% Similarity=0.218 Sum_probs=204.7
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
-.+|++++.||+|+||.||++... +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 356899999999999999999954 6999999999765322 24678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCC--CCC
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGK 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~--~~~ 179 (460)
|++|++|.+++.. .+.+++..+..++.|++.||.|||++ + |+||||||+|||++.++.+||+|||++.... ...
T Consensus 112 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (360)
T 3eqc_A 112 HMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188 (360)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999999999974 35689999999999999999999996 8 9999999999999999999999999986432 234
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc-------------------------
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL------------------------- 234 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------------------- 234 (460)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.............
T Consensus 189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (360)
T 3eqc_A 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG 268 (360)
T ss_dssp --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence 5678999999999998889999999999999999999999986543322111000
Q ss_pred -------------cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 -------------QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 -------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...............++.++.+|+.+||+.||.+|||+.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000001111122346789999999999999999999999987
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=340.81 Aligned_cols=266 Identities=15% Similarity=0.189 Sum_probs=210.2
Q ss_pred CCCCCCCccccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-
Q 012608 3 EVDGLPSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR- 80 (460)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~- 80 (460)
|.....+...|+++.-.....+-.+|++++.||+|+||.||+|.. .+|+.||||+++.. ..+.+.+|+.++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~ 89 (330)
T 3nsz_A 13 DVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRG 89 (330)
T ss_dssp TTTTTSCHHHHCGGGCCCCCEEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTT
T ss_pred cccccCchhHHHhhhhhhcccCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCC
Confidence 334444444555544333345557799999999999999999984 57999999998743 3678999999999996
Q ss_pred CCccceeeeEEee--CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE
Q 012608 81 NNRLTNLLGCCCE--GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158 (460)
Q Consensus 81 h~~iv~~~~~~~~--~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill 158 (460)
||||+++++++.. ....++||||+++++|.+++. .+++..+..++.|++.||.|||+++ |+||||||+|||+
T Consensus 90 ~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dikp~Nil~ 163 (330)
T 3nsz_A 90 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI 163 (330)
T ss_dssp STTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEE
T ss_pred CCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHEEE
Confidence 9999999999987 567899999999999999884 3889999999999999999999999 9999999999999
Q ss_pred cCCC-CeEEccCCCcccCCCC---CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhh--hh--
Q 012608 159 DEDG-NPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LI-- 229 (460)
Q Consensus 159 ~~~~-~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~--~~-- 229 (460)
+.++ .+||+|||++...... ....+|..|+|||.+.+ ..++.++|||||||++|+|++|..||...... .+
T Consensus 164 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~ 243 (330)
T 3nsz_A 164 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 243 (330)
T ss_dssp ETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHH
T ss_pred cCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHH
Confidence 9776 7999999999765433 34568899999999977 56899999999999999999999988432110 00
Q ss_pred --------------hhc--------------cccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 230 --------------RDR--------------NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 230 --------------~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
... ..............+..+++++.+||.+||+.||.+|||++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 244 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 000000111112223346789999999999999999999999998
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=333.00 Aligned_cols=246 Identities=15% Similarity=0.186 Sum_probs=204.4
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC------CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.|++++.||+|+||.||++... +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++..++..++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 5889999999999999999965 6999999998754322 36789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC----CeEEccCCCcccC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 175 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~DFg~a~~~ 175 (460)
||||++|++|.+++.. ...+++..++.++.|++.||.|||+++ ++|+||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR-IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999864 457899999999999999999999999 99999999999998776 8999999998865
Q ss_pred CCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 176 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 176 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
... ....+|+.|+|||.+.+..++.++||||||+++|+|++|..||................. ..........+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 240 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY--DFDEEYFSNTSE 240 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--CCCHHHHTTCCH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc--CCcchhcccCCH
Confidence 443 345689999999999988899999999999999999999999876544322221111100 001111234567
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+.+++.+||..||.+|||+.++++
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHh
Confidence 8999999999999999999999997
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-44 Score=332.98 Aligned_cols=253 Identities=22% Similarity=0.267 Sum_probs=206.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcC----CcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
...+|++.+.||+|+||.||+|.... +..||+|.++..... ..+.+.+|+.++++++||||+++++++.. +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 34678999999999999999998432 346999998765322 35679999999999999999999999864 5578
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 89 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 89 IIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN-CVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999865 3456899999999999999999999999 999999999999999999999999998865433
Q ss_pred -----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||............... .....+..+++
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 241 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG-----DRLPKPDLCPP 241 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHT-----CCCCCCTTCCH
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcC-----CCCCCCCCCCH
Confidence 23456788999999988889999999999999999998 99888643322221111110 11123445678
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 242 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 242 VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999987753
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=346.68 Aligned_cols=256 Identities=19% Similarity=0.266 Sum_probs=209.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc-CC-----cEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCC
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE-NQ-----RRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 95 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 95 (460)
....|++.+.||+|+||.||+|... ++ +.||+|.++..... ..+.+.+|+.+++++ +||||+++++++..++
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 3467889999999999999999953 23 47999999765432 256789999999999 8999999999999999
Q ss_pred eeEEEEEcCCCCCHHhhhhccC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWE------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN 163 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~ 163 (460)
..++||||++|++|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+|||++.++.
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGCEEEGGGE
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC-cccCCcccceEEECCCCe
Confidence 9999999999999999986431 346899999999999999999999999 999999999999999999
Q ss_pred eEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccc
Q 012608 164 PRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQM 236 (460)
Q Consensus 164 ~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 236 (460)
+||+|||++...... ....+|+.|+|||.+.+..++.++|||||||++|+|+| |..||.............
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-- 280 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV-- 280 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH--
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH--
Confidence 999999998765332 23345778999999988889999999999999999999 888876543211111110
Q ss_pred cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
........+...++.+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 281 --~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 281 --KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp --HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --hcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 1111122344567899999999999999999999999999987654
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=356.55 Aligned_cols=245 Identities=16% Similarity=0.194 Sum_probs=201.1
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.|++++.||+|+||+||+|... ++..||+|++.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 5899999999999999999954 68999999987643 23367899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCcccCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~~~~~-- 178 (460)
++|++|.+.+.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++......
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN-IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998864 356999999999999999999999999 999999999999975 455999999998866543
Q ss_pred -CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 179 -KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 179 -~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
....||+.|+|||++. ..++.++|||||||++|+|++|..||.................. ........+++.+.++
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYT--FDSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCchhcccCCHHHHHH
Confidence 3457899999999986 56899999999999999999999999776544333222111110 0111123567899999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
|.+||+.||.+|||+.++++
T Consensus 272 i~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHCCCChhhCccHHHHhc
Confidence 99999999999999999986
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=364.18 Aligned_cols=246 Identities=20% Similarity=0.257 Sum_probs=204.5
Q ss_pred ccCCCCCCeEEEEEEc---CCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCC
Q 012608 33 EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNET 108 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~s 108 (460)
+||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+.++++++||||+++++++.. +..++||||++|++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999853 467799999986543 347889999999999999999999999875 56899999999999
Q ss_pred HHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-------Cc
Q 012608 109 LAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK-------SY 181 (460)
Q Consensus 109 L~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~-------~~ 181 (460)
|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~-iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC-EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999864 3457999999999999999999999999 9999999999999999999999999998754322 22
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
.+|+.|+|||++.+..++.++|||||||++|||+| |..||............... .....+..+++++.+||.+
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-----KRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTT-----CCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHHH
Confidence 34678999999998899999999999999999998 99998765433322221111 1223456778999999999
Q ss_pred HcccCCCCCCChhHHHHHhccccccC
Q 012608 261 CLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
||+.||.+|||+.++++.|+.+....
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 99999999999999999999876543
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=331.91 Aligned_cols=249 Identities=17% Similarity=0.232 Sum_probs=203.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
+..+.....||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 34455556889999999999995 56899999999876655678899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-CCCeEEccCCCcccCCC----
Q 012608 104 MPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKNSRD---- 177 (460)
Q Consensus 104 ~~g~sL~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~DFg~a~~~~~---- 177 (460)
++|++|.+++.... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++. ++.+||+|||++.....
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ-IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC-EEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 99999999987532 235678899999999999999999999 999999999999987 89999999999876543
Q ss_pred CCCccCCCcccCccccccCC--CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 178 GKSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 178 ~~~~~~t~~y~aPE~~~~~~--~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
.....+|+.|+|||.+.+.. ++.++||||||+++|+|++|..||............ ..........+..+++++.
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 256 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAK 256 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---HHHHCCCCCCCTTSCHHHH
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---hccccccccccccCCHHHH
Confidence 23457899999999997654 788999999999999999999988543211110000 0001112244566788999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||+.++++
T Consensus 257 ~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 257 AFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHccCChhhCCCHHHHhc
Confidence 9999999999999999999987
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=335.04 Aligned_cols=247 Identities=18% Similarity=0.221 Sum_probs=201.1
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..|++++.||+|+||.||+|... +|+.||+|++........+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 56899999999999999999964 58999999998776667889999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC----CCCCC
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS----RDGKS 180 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~----~~~~~ 180 (460)
+|++|.+++.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++... .....
T Consensus 99 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (302)
T 2j7t_A 99 PGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR-IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176 (302)
T ss_dssp TTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC-cccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence 99999998864 2456999999999999999999999999 999999999999999999999999987532 12345
Q ss_pred ccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 181 YSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 181 ~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
..+|+.|+|||.+. +..++.++||||||+++|+|++|..||............... .......+..++..+.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~ 253 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---DPPTLLTPSKWSVEFR 253 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS---CCCCCSSGGGSCHHHH
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhcc---CCcccCCccccCHHHH
Confidence 57899999999983 566889999999999999999999988654332221111111 0111123445678999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||+.++++
T Consensus 254 ~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 254 DFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHHHSCSCTTTSCCHHHHTT
T ss_pred HHHHHHcccChhhCCCHHHHhc
Confidence 9999999999999999999987
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=357.07 Aligned_cols=245 Identities=18% Similarity=0.167 Sum_probs=206.6
Q ss_pred ccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.|++++.||+|+||.||++... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 5899999999999999999954 79999999986543 2346789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE---cCCCCeEEccCCCcccCCCCC
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~DFg~a~~~~~~~ 179 (460)
|+.|++|.+.+. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||++.......
T Consensus 107 ~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 999999999886 3567999999999999999999999999 9999999999999 567899999999987665443
Q ss_pred ---CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 180 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 180 ---~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||.................. ........+++++.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT--FELPQWKKVSESAKD 260 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGGGGSCHHHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCCcccccCCHHHHH
Confidence 3468999999999875 6899999999999999999999999775443332221111110 011112356789999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
+|.+||+.||.+|||+.++++
T Consensus 261 li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHCCCChhHCcCHHHHhh
Confidence 999999999999999999997
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=367.04 Aligned_cols=245 Identities=19% Similarity=0.259 Sum_probs=210.9
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (460)
...+|++++.||+|+||.||++.. .+|+.||||+++.. .....+.+..|..++..+ +||+|+.+++++...+.+|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 467899999999999999999995 46899999998743 233467788999999998 7999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC--
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR-- 176 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~-- 176 (460)
+||||++||+|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g-IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG-IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS-EECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999974 357999999999999999999999999 9999999999999999999999999998532
Q ss_pred --CCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 177 --DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 177 --~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.....+....... ...++..+++++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEA 569 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS------CCCCCTTSCHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHH
Confidence 224567899999999999899999999999999999999999999876554443333221 123556788999
Q ss_pred HHHHHHHcccCCCCCCCh-----hHHHH
Q 012608 255 VRLASRCLQYEPRERPNP-----KSLVT 277 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~-----~~il~ 277 (460)
.+||.+||+.||.+||++ ++|++
T Consensus 570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 999999999999999998 66665
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=339.38 Aligned_cols=256 Identities=20% Similarity=0.289 Sum_probs=208.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCee
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 97 (460)
...|++++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 36789999999999999999983 24778999999754322 256789999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccC
Q 012608 98 LLVAEYMPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTF 169 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DF 169 (460)
++||||++|++|.+++..... ..+++..++.++.|++.||.|||+++ |+||||||+|||++. +..+||+||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~-i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH-FIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC-eecCcCCHhHEEEecCCCcceEEECcc
Confidence 999999999999999975432 45889999999999999999999999 999999999999984 456999999
Q ss_pred CCcccCCC------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccc
Q 012608 170 GLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCL 242 (460)
Q Consensus 170 g~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (460)
|++..... .....+|+.|+|||.+.+..++.++|||||||++|+|+| |..||............... .
T Consensus 188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-----~ 262 (327)
T 2yfx_A 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----G 262 (327)
T ss_dssp HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----C
T ss_pred ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC-----C
Confidence 98864322 234457889999999988889999999999999999998 88888655433222211111 1
Q ss_pred cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 243 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
....+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 263 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 12234567789999999999999999999999999999886653
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=346.88 Aligned_cols=250 Identities=18% Similarity=0.238 Sum_probs=204.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEE----cCCcEEEEEEecCCC----CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeC
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEG 94 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 94 (460)
+..+|++++.||+|+||.||+++. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++..+
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 346899999999999999999996 368999999986532 22356678899999999 799999999999999
Q ss_pred CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
+..++||||++|++|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred ceEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999999874 356999999999999999999999999 99999999999999999999999999876
Q ss_pred CCCC-----CCccCCCcccCccccccC--CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 175 SRDG-----KSYSTNLAFTPPEYLRTG--RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 175 ~~~~-----~~~~~t~~y~aPE~~~~~--~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
.... ....||+.|+|||++.+. .++.++|||||||++|+|++|..||.................. ....++
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~ 286 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYP 286 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCC
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCC
Confidence 4322 345789999999999853 4788999999999999999999998643211110000000000 112345
Q ss_pred chhHHHHHHHHHHHcccCCCCCC-----ChhHHHHH
Q 012608 248 DDDGTELVRLASRCLQYEPRERP-----NPKSLVTA 278 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rp-----s~~~il~~ 278 (460)
..++..+.+||.+||..||.+|| |+.++++.
T Consensus 287 ~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 287 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 66778999999999999999999 88999873
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=335.12 Aligned_cols=254 Identities=19% Similarity=0.292 Sum_probs=189.1
Q ss_pred cCCcccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCC-CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAW-PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
-+..+|++++.||+|+||.||++. ..+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 345779999999999999999999 45789999999865432 2356788999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhcc------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 101 AEYMPNETLAKHLFHW------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
|||++|++|.+++... ....+++..++.++.|++.||.|||+++ ++||||||+||+++.++.+||+|||++..
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG-QIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999988631 3456899999999999999999999999 99999999999999999999999998865
Q ss_pred CCCC---------CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhh----ccccccccc
Q 012608 175 SRDG---------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRD----RNLQMLTDS 240 (460)
Q Consensus 175 ~~~~---------~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~----~~~~~~~~~ 240 (460)
.... ....+|+.|+|||.+.+ ..++.++||||||+++|+|++|..||.......... .........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 250 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccc
Confidence 4322 23468999999999875 458999999999999999999999986543221111 111111111
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.........+++++.+++.+||+.||.+|||+.++++
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp ----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1222334567789999999999999999999999987
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=350.49 Aligned_cols=248 Identities=18% Similarity=0.241 Sum_probs=194.9
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeC-----Cee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 97 (460)
.+|++++.||+|+||.||+|.. .+|+.||||+++..... ..+.+.+|+.++++++||||+++++++... +..
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 4689999999999999999995 46899999999764332 246789999999999999999999999766 568
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
|+||||++ ++|.+++. ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~g-ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHESG-IIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999997 69999986 3567999999999999999999999999 99999999999999999999999999986542
Q ss_pred C--------------------------CCccCCCcccCcccc-ccCCCCCCCceehHHHHHHHHhhCCCCC---------
Q 012608 178 G--------------------------KSYSTNLAFTPPEYL-RTGRVTPESVIYSFGTLLLDLLSGKHIP--------- 221 (460)
Q Consensus 178 ~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~sDi~slG~~l~el~tg~~p~--------- 221 (460)
. ....||+.|+|||++ .+..++.++|||||||++|||++|..|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p 261 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence 2 456789999999986 4556899999999999999999854433
Q ss_pred --CChhh------------------hhh---------------hh---cc----cccccc--ccccCCCCchhHHHHHHH
Q 012608 222 --PSHAL------------------DLI---------------RD---RN----LQMLTD--SCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 222 --~~~~~------------------~~~---------------~~---~~----~~~~~~--~~~~~~~~~~~~~~l~~l 257 (460)
++... +.+ .. .. ...... +.......+.+++++.+|
T Consensus 262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 341 (432)
T 3n9x_A 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341 (432)
T ss_dssp SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence 22110 000 00 00 000000 000000113467899999
Q ss_pred HHHHcccCCCCCCChhHHHH
Q 012608 258 ASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~ 277 (460)
|.+||+.||.+|||++++++
T Consensus 342 l~~mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 342 LESMLKFNPNKRITIDQALD 361 (432)
T ss_dssp HHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHhcCCcccCCCHHHHhc
Confidence 99999999999999999998
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=356.78 Aligned_cols=246 Identities=15% Similarity=0.166 Sum_probs=202.9
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC-------------CCHHHHHHHHHHHhcCCCCccceeeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW-------------PDPRQFLEEARSVGQLRNNRLTNLLGCC 91 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 91 (460)
..|++++.||+|+||+||+|.. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 4689999999999999999995 4689999999875432 2356799999999999999999999999
Q ss_pred eeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC---CeEEcc
Q 012608 92 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG---NPRLST 168 (460)
Q Consensus 92 ~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~---~~kl~D 168 (460)
..++..++||||++|++|.+.+.. .+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN-IVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999998864 457999999999999999999999999 99999999999998765 699999
Q ss_pred CCCcccCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCC
Q 012608 169 FGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ 245 (460)
Q Consensus 169 Fg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (460)
||++...... ....||+.|+|||++. +.++.++|||||||++|+|++|..||.+................ ....
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--~~~~ 269 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY--FDFN 269 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCHH
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCcc
Confidence 9999876543 3557899999999987 56899999999999999999999999876544333222111110 0000
Q ss_pred CCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 246 FTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 246 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
....+++++.+++.+||+.||.+|||+.++++
T Consensus 270 ~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11346789999999999999999999999987
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-44 Score=334.82 Aligned_cols=257 Identities=15% Similarity=0.136 Sum_probs=206.8
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEE-eeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-CEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~ 103 (460)
.+|++++.||+|+||.||+|.. .+|+.||||++..... .+.+.+|+.+++.++|++++..+..+ ..++..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 4688999999999999999995 6799999999876442 35789999999999888766655555 667788999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE---cCCCCeEEccCCCcccCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~DFg~a~~~~~~-- 178 (460)
+ +++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 9 8999999864 3457999999999999999999999999 9999999999999 48889999999998765432
Q ss_pred ---------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh---hhhccccccccccccCCC
Q 012608 179 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL---IRDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 179 ---------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~ 246 (460)
....||+.|+|||.+.+..++.++|||||||++|+|++|+.||....... .......... ..+....
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 242 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-STPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-HSCHHHH
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc-CCchHHH
Confidence 34568999999999998889999999999999999999999986532110 0000000000 0001112
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCCC
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETEV 288 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~~ 288 (460)
...+++++.+++.+||+.||.+|||+.++++.|+.+......
T Consensus 243 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 245668999999999999999999999999999998766543
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-44 Score=332.35 Aligned_cols=254 Identities=17% Similarity=0.213 Sum_probs=207.3
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEee--CCee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCE--GDER 97 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~ 97 (460)
....+|++++.||+|+||.||++.. .+|+.||+|++....... .+.+.+|+.++++++||||+++++++.. ++..
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred CchhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 3467899999999999999999995 469999999997654332 4678999999999999999999998754 5789
Q ss_pred EEEEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCC----cccccccCCcEEEcCCCCeEEccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGR----ALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~----iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
++||||++|++|.+++... ....+++..++.++.|++.||.|||+.+. |+|+||||+||+++.++.+||+|||+
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 9999999999999998642 23458999999999999999999999763 99999999999999999999999999
Q ss_pred cccCCCCC----CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 172 MKNSRDGK----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 172 a~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
+....... ...+|+.|+|||.+.+..++.++||||||+++|+|++|..||................ ....+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~ 237 (279)
T 2w5a_A 163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK-----FRRIP 237 (279)
T ss_dssp HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC-----CCCCC
T ss_pred heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcc-----cccCC
Confidence 87665432 3467999999999998889999999999999999999999987654332222111111 11344
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHHHhcc
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~ 281 (460)
..++.++.+++.+||+.||.+|||+.++++.+..
T Consensus 238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 5677899999999999999999999999985543
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=350.28 Aligned_cols=246 Identities=15% Similarity=0.176 Sum_probs=191.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--------CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--------PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
..|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++++++||||+++++++. .+.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence 4588899999999999999995 5689999999864321 11235889999999999999999999975 456
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC---CCeEEccCCCcc
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMK 173 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~---~~~kl~DFg~a~ 173 (460)
.++||||++|++|.+++. ..+.+++..+..++.|++.||.|||+++ |+||||||+|||++.+ +.+||+|||+++
T Consensus 214 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred eEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCCCcceEEEeecccce
Confidence 899999999999999886 3567999999999999999999999999 9999999999999654 459999999998
Q ss_pred cCCCC---CCccCCCcccCcccccc---CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh-hhccccccccccccCCC
Q 012608 174 NSRDG---KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-RDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 174 ~~~~~---~~~~~t~~y~aPE~~~~---~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 246 (460)
..... ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||........ ......... ......
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~--~~~~~~ 368 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY--NFIPEV 368 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC--CCCHHH
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC--CCCchh
Confidence 76543 35578999999999853 5578899999999999999999999865322110 000000000 000011
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...+++.+.+++.+||+.||.+|||+.++++
T Consensus 369 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 369 WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 2345688999999999999999999999998
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=351.17 Aligned_cols=259 Identities=14% Similarity=0.150 Sum_probs=209.1
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC-CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCC--eeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGD--ERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 101 (460)
..|++.+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46899999999999999999954 59999999997543 234678889999999999999999999998655 679999
Q ss_pred EcCCCCCHHhhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE----cCCCCeEEccCCCcccCC
Q 012608 102 EYMPNETLAKHLFHWET-HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~DFg~a~~~~ 176 (460)
||++|++|.+++..... ..+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG-IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC-EEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 99999999999975322 33899999999999999999999999 9999999999999 777789999999998655
Q ss_pred CC---CCccCCCcccCcccccc--------CCCCCCCceehHHHHHHHHhhCCCCCCChhh----hhhhhccccccc---
Q 012608 177 DG---KSYSTNLAFTPPEYLRT--------GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNLQMLT--- 238 (460)
Q Consensus 177 ~~---~~~~~t~~y~aPE~~~~--------~~~~~~sDi~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~--- 238 (460)
.. ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... ...........+
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 43 34568999999999865 4578899999999999999999998853211 000000000000
Q ss_pred ----------------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 239 ----------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 239 ----------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.......+...++..+.+++.+||+.||++|||+.++++.++.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 01111234456788999999999999999999999999998877654
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-43 Score=331.26 Aligned_cols=246 Identities=16% Similarity=0.205 Sum_probs=202.2
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
-..|++++.||+|+||.||+|... +|+.||||.+.... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 456899999999999999999954 59999999987643 457899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
++|++|.+++.. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++...... .
T Consensus 106 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 106 CGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR-KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp CTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 999999998863 3467999999999999999999999999 999999999999999999999999998765433 3
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...+|+.|+|||.+.+..++.++||||||+++|+|++|..||.............. ........+..++..+.+++.
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~ 260 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT---NPPPTFRKPELWSDNFTDFVK 260 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---SCCCCCSSGGGSCHHHHHHHH
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc---CCCcccCCcccCCHHHHHHHH
Confidence 45688999999999988899999999999999999999998865432211110000 001111223456789999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||..||.+|||+.++++
T Consensus 261 ~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 261 QCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHTCSCTTTSCCHHHHTT
T ss_pred HHccCChhhCcCHHHHHh
Confidence 999999999999999987
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=340.45 Aligned_cols=256 Identities=19% Similarity=0.238 Sum_probs=198.1
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHH--hcCCCCccceeeeEEee-----CC
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSV--GQLRNNRLTNLLGCCCE-----GD 95 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l--~~l~h~~iv~~~~~~~~-----~~ 95 (460)
-++.+|++++.||+|+||.||+|+. +|+.||||++.... ...+..|.+++ ..++||||+++++.+.. ..
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 4678899999999999999999987 68999999986433 44555555554 45799999999986542 23
Q ss_pred eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CCcccccccCCcEEEcCCCCeEE
Q 012608 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK---------GRALYHDLNAYRILFDEDGNPRL 166 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~~iiH~Dikp~Nill~~~~~~kl 166 (460)
.+++||||++|++|.+++.. ...++..++.++.||+.||.|||+. + |+||||||+|||++.++.+||
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~-ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA-ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC-EECSSCSGGGEEECTTSCEEE
T ss_pred eEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccc-eeecccccceEEEcCCCcEEE
Confidence 57899999999999999953 4568899999999999999999999 8 999999999999999999999
Q ss_pred ccCCCcccCCCC------------CCccCCCcccCcccccc-------CCCCCCCceehHHHHHHHHhhCCCCCCChhh-
Q 012608 167 STFGLMKNSRDG------------KSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL- 226 (460)
Q Consensus 167 ~DFg~a~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~sDi~slG~~l~el~tg~~p~~~~~~- 226 (460)
+|||++...... ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.....
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 999999765321 23468999999999976 3467799999999999999999766533211
Q ss_pred hhh-----------------hhccccccccccccCC--CCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 227 DLI-----------------RDRNLQMLTDSCLEGQ--FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 227 ~~~-----------------~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
... ..........+..... ....+++.+.+||.+||+.||.+|||+.++++.|+.+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 000 0000000001111111 12246778999999999999999999999999998887543
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=343.90 Aligned_cols=247 Identities=18% Similarity=0.238 Sum_probs=184.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeC------Ce
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~ 96 (460)
..|++++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++... +.
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 5689999999999999999994 56999999998764332 246788999999999999999999998654 56
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.++|+|++ +++|.+++. ...+++..+..++.||+.||.|||+.| |+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 689998884 367999999999999999999999999 9999999999999999999999999998654
Q ss_pred CC-CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc------------------
Q 012608 177 DG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------ 236 (460)
Q Consensus 177 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~------------------ 236 (460)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.............
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 33 45678999999999876 56899999999999999999999999765332111110000
Q ss_pred -----ccc--ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 -----LTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 -----~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.. ...........++.+.+|+.+||+.||.+|||+.++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000 00000111245688999999999999999999999997
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=338.34 Aligned_cols=257 Identities=22% Similarity=0.288 Sum_probs=209.5
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeC
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG 94 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 94 (460)
-...+|++++.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...
T Consensus 24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 4456789999999999999999983 34689999999765432 245789999999999 799999999998765
Q ss_pred C-eeEEEEEcCCCCCHHhhhhccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc
Q 012608 95 D-ERLLVAEYMPNETLAKHLFHWET--------------HPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159 (460)
Q Consensus 95 ~-~~~lv~e~~~g~sL~~~~~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~ 159 (460)
+ ..++||||++|++|.+++..... ..+++..++.++.|++.||.|||+++ |+||||||+||+++
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-i~H~dikp~Nil~~ 182 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLS 182 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEC
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC-cccccCccceEEEC
Confidence 4 48999999999999999975332 12889999999999999999999999 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhc
Q 012608 160 EDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDR 232 (460)
Q Consensus 160 ~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~ 232 (460)
.++.+||+|||++....... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..||...........
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~ 262 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHH
Confidence 99999999999998654332 3356788999999998889999999999999999998 8888865432111110
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 233 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.... ......+..+++.+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 263 ~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 263 RLKE----GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHHH----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hhcc----CccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0000 01122344567899999999999999999999999999988764
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=352.63 Aligned_cols=239 Identities=15% Similarity=0.120 Sum_probs=190.7
Q ss_pred cccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCC---CCCHHHHHHHH---HHHhcCCCCccceee-------eEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMA---WPDPRQFLEEA---RSVGQLRNNRLTNLL-------GCC 91 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~---~~l~~l~h~~iv~~~-------~~~ 91 (460)
..|++++.||+|+||.||+|+ ..+|+.||||++.... ....+.+.+|+ +++++++||||++++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 568889999999999999999 4679999999997442 22357899999 555556899999998 666
Q ss_pred eeCC-----------------eeEEEEEcCCCCCHHhhhhccCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCcccc
Q 012608 92 CEGD-----------------ERLLVAEYMPNETLAKHLFHWET-----HPMKWAMRLRVVLHLAQALEYCTSKGRALYH 149 (460)
Q Consensus 92 ~~~~-----------------~~~lv~e~~~g~sL~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~ 149 (460)
...+ ..++||||+ +|+|.+++..... ..+++..++.|+.||+.||+|||+++ |+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT-EECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC-eecC
Confidence 5543 278999999 5899999974211 12335888899999999999999999 9999
Q ss_pred cccCCcEEEcCCCCeEEccCCCcccCCCC-CCccCCCcccCccccccC-----------CCCCCCceehHHHHHHHHhhC
Q 012608 150 DLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTG-----------RVTPESVIYSFGTLLLDLLSG 217 (460)
Q Consensus 150 Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~sDi~slG~~l~el~tg 217 (460)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|+|+||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999865543 34456 999999999877 799999999999999999999
Q ss_pred CCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 218 KHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 218 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.||............ . .....+++++.++|.+||+.||.+|||+.++++
T Consensus 310 ~~Pf~~~~~~~~~~~~----~------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 310 DLPITKDAALGGSEWI----F------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp SCCC------CCSGGG----G------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCCcccccccchhhh----h------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9998654322111111 1 112456789999999999999999999999987
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=341.79 Aligned_cols=246 Identities=12% Similarity=0.119 Sum_probs=204.7
Q ss_pred cccchhcccCCCCCCeEEEEE------EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC---CCccceeeeEEeeCCe
Q 012608 26 AVENIVSEHGEKAPNVVYKGK------LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~ 96 (460)
..|.+++.||+|+||+||+|. ..+++.||||+++.. ....+.+|++++++++ |+||+.+++++..++.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 568889999999999999993 456899999999754 3678889999999886 9999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-----------CC
Q 012608 97 RLLVAEYMPNETLAKHLFHW---ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----------DG 162 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-----------~~ 162 (460)
.++||||++||+|.+++... ....+++..++.|+.||+.||+|||+++ |+||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE-IIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC-eecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999642 3467999999999999999999999999 999999999999988 89
Q ss_pred CeEEccCCCcccCC---C---CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc
Q 012608 163 NPRLSTFGLMKNSR---D---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 236 (460)
Q Consensus 163 ~~kl~DFg~a~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 236 (460)
.+||+|||+++... . .....||+.|+|||++.+..++.++|||||||++|+|+||+.||.........
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~------ 294 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK------ 294 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE------
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee------
Confidence 99999999996533 1 23456899999999999888999999999999999999999888543221111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHcccCCCCC-CChhHHHHHhcccccc
Q 012608 237 LTDSCLEGQFTDDDGTELVRLASRCLQYEPRER-PNPKSLVTALSPLQKE 285 (460)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R-ps~~~il~~L~~~~~~ 285 (460)
.. .. .... ..++.+.+++..||..+|.+| |+++++.+.|+.+...
T Consensus 295 ~~-~~-~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 295 PE-GL-FRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp EC-SC-CTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ec-hh-cccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 00 00 0111 246789999999999999999 6888888888877643
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=328.34 Aligned_cols=245 Identities=19% Similarity=0.246 Sum_probs=201.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
....|++++.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3467899999999999999999965 69999999986432 2346689999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||++|++|.+++.. .+.+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 89 VMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM-VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC-SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999999864 356899999999999999999999999 999999999999999999999999998765543
Q ss_pred --CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||............... ....+..++..+.
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~ 239 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG------VFYIPEYLNRSVA 239 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC------cccCchhcCHHHH
Confidence 34567899999999987665 67999999999999999999998765433322221111 1123445678999
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||+.||.+|||+.++++
T Consensus 240 ~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 240 TLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHccCChhhCCCHHHHHh
Confidence 9999999999999999999998
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=339.56 Aligned_cols=251 Identities=17% Similarity=0.190 Sum_probs=205.5
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC-----------------HHHHHHHHHHHhcCCCCcccee
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-----------------PRQFLEEARSVGQLRNNRLTNL 87 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~~iv~~ 87 (460)
..+|++++.||+|+||.||++.. +|+.||||++....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36799999999999999999999 99999999986432211 1789999999999999999999
Q ss_pred eeEEeeCCeeEEEEEcCCCCCHHhh------hhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcC
Q 012608 88 LGCCCEGDERLLVAEYMPNETLAKH------LFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDE 160 (460)
Q Consensus 88 ~~~~~~~~~~~lv~e~~~g~sL~~~------~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~ 160 (460)
++++...+..++||||++|++|.++ +.......+++..++.++.|++.||.|||+ .+ |+|+||||+||+++.
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDK 187 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC-EECCCCCGGGEEECT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC-EeecCCChHhEEEcC
Confidence 9999999999999999999999998 654336789999999999999999999999 88 999999999999999
Q ss_pred CCCeEEccCCCcccCCCC--CCccCCCcccCccccccC-CCCC-CCceehHHHHHHHHhhCCCCCCChhh-hhhhhcccc
Q 012608 161 DGNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTG-RVTP-ESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQ 235 (460)
Q Consensus 161 ~~~~kl~DFg~a~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~sDi~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~ 235 (460)
++.+||+|||++...... ....+|..|+|||.+.+. .++. ++|||||||++|+|++|..||..... .........
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~ 267 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRT 267 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTS
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc
Confidence 999999999998865433 456789999999999877 5666 99999999999999999999875433 111111111
Q ss_pred cccc-cc------------ccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 MLTD-SC------------LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ~~~~-~~------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.... +. ........+++++.+++.+||+.||.+|||+.++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1000 00 000111457789999999999999999999999988
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-44 Score=334.72 Aligned_cols=257 Identities=15% Similarity=0.135 Sum_probs=203.4
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEE-eeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCC-CEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~ 103 (460)
..|++++.||+|+||.||+|.. .+|+.||||++..... ...+.+|+.+++.++|++++..+..+ ..++..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 4688999999999999999995 6799999998765432 34588999999999888766666655 667788999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE---cCCCCeEEccCCCcccCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~DFg~a~~~~~~-- 178 (460)
+ |++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||+ +.++.+||+|||++......
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 9 8999999864 3457999999999999999999999999 9999999999999 78899999999998765432
Q ss_pred ---------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc--cccccccccCCCC
Q 012608 179 ---------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--QMLTDSCLEGQFT 247 (460)
Q Consensus 179 ---------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 247 (460)
....||+.|+|||.+.+..++.++|||||||++|+|++|+.||............. .......+.....
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 243 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHT
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhh
Confidence 24568999999999998889999999999999999999999986532111000000 0000000011122
Q ss_pred chhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCC
Q 012608 248 DDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~ 287 (460)
..+++++.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 244 ~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 244 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 3456899999999999999999999999999999876544
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=341.60 Aligned_cols=247 Identities=15% Similarity=0.225 Sum_probs=192.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCC------
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------ 95 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 95 (460)
...|++++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35789999999999999999995 469999999997643322 457889999999999999999999997654
Q ss_pred eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
..++||||++ ++|.+.+. ..+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred ceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC-eecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 6899999998 57888774 35899999999999999999999999 999999999999999999999999999865
Q ss_pred CCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccccc-----------
Q 012608 176 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC----------- 241 (460)
Q Consensus 176 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----------- 241 (460)
... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+................+.
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 543 345789999999999988899999999999999999999999976543221111111100000
Q ss_pred ---------c----------cCCC------CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 242 ---------L----------EGQF------TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 242 ---------~----------~~~~------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. ...+ ....+.++.+|+.+||+.||.+|||++++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 0000 1123678999999999999999999999998
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-43 Score=338.92 Aligned_cols=247 Identities=19% Similarity=0.196 Sum_probs=203.3
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC--------HHHHHHHHHHHhcC-CCCccceeeeEEeeCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQL-RNNRLTNLLGCCCEGD 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~ 95 (460)
..|++.+.||.|+||.||+|... +|+.||||++....... .+.+.+|+.+++++ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 45888899999999999999964 79999999987654221 34678999999999 8999999999999999
Q ss_pred eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
..++||||++|++|.+++.. ...+++..+..++.||+.||.|||+.| |+|+||||+|||++.++.+||+|||++...
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g-i~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN-IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999999999999864 357999999999999999999999999 999999999999999999999999998765
Q ss_pred CCC---CCccCCCcccCcccccc------CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCC
Q 012608 176 RDG---KSYSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 176 ~~~---~~~~~t~~y~aPE~~~~------~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (460)
... ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||................... ....
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~ 328 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQF--SSPE 328 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CHHH
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC--CCcc
Confidence 543 34578999999999863 357889999999999999999999987643322221111110000 0000
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
....+..+.+++.+||+.||.+|||+.++++
T Consensus 329 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 329 WDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1245678999999999999999999999998
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=342.83 Aligned_cols=246 Identities=20% Similarity=0.236 Sum_probs=197.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeC----------
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG---------- 94 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---------- 94 (460)
..|++++.||+|+||+||+|.. .+|+.||||++.... ....+|+.+++.++||||+++++++...
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 5689999999999999999994 579999999986543 2234799999999999999999998443
Q ss_pred ----------------------------CeeEEEEEcCCCCCHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 012608 95 ----------------------------DERLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKG 144 (460)
Q Consensus 95 ----------------------------~~~~lv~e~~~g~sL~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 144 (460)
...++||||++ ++|.+.+.. ..+..+++..+..++.||+.||.|||++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 161 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG 161 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 34789999998 587776653 24567999999999999999999999999
Q ss_pred CcccccccCCcEEEc-CCCCeEEccCCCcccCCCC---CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCC
Q 012608 145 RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKH 219 (460)
Q Consensus 145 ~iiH~Dikp~Nill~-~~~~~kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~ 219 (460)
|+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||.+.+.. ++.++|||||||++|+|++|+.
T Consensus 162 -i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 162 -ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp -EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred -CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 99999999999997 6889999999999865433 4557899999999987654 8999999999999999999999
Q ss_pred CCCChhhhhhhhccc-----------------------cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHH
Q 012608 220 IPPSHALDLIRDRNL-----------------------QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276 (460)
Q Consensus 220 p~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il 276 (460)
||.+........... .......+...++...++++.+|+.+||+.||.+|||+.+++
T Consensus 241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (383)
T 3eb0_A 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320 (383)
T ss_dssp SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 997653322111110 001111111224556778999999999999999999999999
Q ss_pred H
Q 012608 277 T 277 (460)
Q Consensus 277 ~ 277 (460)
+
T Consensus 321 ~ 321 (383)
T 3eb0_A 321 A 321 (383)
T ss_dssp T
T ss_pred c
Confidence 6
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=325.91 Aligned_cols=245 Identities=19% Similarity=0.246 Sum_probs=200.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEee----CCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~ 98 (460)
..|++.+.||+|+||.||+|.. .++..||+|++...... ..+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 3478889999999999999995 56889999998754432 25678999999999999999999999865 35589
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEc-CCCCeEEccCCCcccCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~-~~~~~kl~DFg~a~~~~ 176 (460)
+||||++|++|.+++.. ...+++..++.++.|++.||.|||+.+ +|+|+||||+|||++ .++.+||+|||++....
T Consensus 106 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999999964 356899999999999999999999985 599999999999997 78999999999987654
Q ss_pred CC--CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh-hhhhccccccccccccCCCCchhHHH
Q 012608 177 DG--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 177 ~~--~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
.. ....||+.|+|||.+. +.++.++|||||||++|+|++|+.||...... .......... .....+...+++
T Consensus 184 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 258 (290)
T 1t4h_A 184 ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV----KPASFDKVAIPE 258 (290)
T ss_dssp TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC----CCGGGGGCCCHH
T ss_pred ccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccC----CccccCCCCCHH
Confidence 43 3456899999999886 56899999999999999999999998653221 1111111111 111223345578
Q ss_pred HHHHHHHHcccCCCCCCChhHHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+++.+||+.||.+|||+.++++
T Consensus 259 l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 259 VKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHccCChhhCCCHHHHhh
Confidence 999999999999999999999987
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=333.96 Aligned_cols=256 Identities=18% Similarity=0.260 Sum_probs=203.7
Q ss_pred cCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
-.+..|++.+.||+|+||.||+|.... .||+|+++.... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 346788999999999999999998743 499999875432 2345688999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC---
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD--- 177 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~--- 177 (460)
|||++|++|.+++.. ....+++..++.++.||+.||.|||+++ ++||||||+||+++ ++.+||+|||++.....
T Consensus 108 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~-i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG-ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CBCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred eecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 999999999999964 3346899999999999999999999999 99999999999998 67999999998765431
Q ss_pred ------CCCccCCCcccCcccccc---------CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccc
Q 012608 178 ------GKSYSTNLAFTPPEYLRT---------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCL 242 (460)
Q Consensus 178 ------~~~~~~t~~y~aPE~~~~---------~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 242 (460)
.....||+.|+|||.+.+ ..++.++|||||||++|+|++|..||.................
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---- 260 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK---- 260 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCC----
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCC----
Confidence 123457899999999864 3478899999999999999999999876544333222211111
Q ss_pred cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccCC
Q 012608 243 EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKETE 287 (460)
Q Consensus 243 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~~ 287 (460)
.......++.++.+++.+||..||.+|||+.++++.|+.+.....
T Consensus 261 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 261 PNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp CCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred CCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 111223456789999999999999999999999999999976643
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-44 Score=345.42 Aligned_cols=248 Identities=13% Similarity=0.067 Sum_probs=185.6
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcC--CCCccceee-------eEEee
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQL--RNNRLTNLL-------GCCCE 93 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l--~h~~iv~~~-------~~~~~ 93 (460)
.|++++.||+|+||+||+|.. .+|+.||||+++...... .+.+.+|+.+++.| +||||++++ +++..
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 488999999999999999995 479999999998765422 45677885544444 699987755 45543
Q ss_pred C-----------------CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCccccc
Q 012608 94 G-----------------DERLLVAEYMPNETLAKHLFHWETHPMKWAMR------LRVVLHLAQALEYCTSKGRALYHD 150 (460)
Q Consensus 94 ~-----------------~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~------~~i~~qi~~~l~~lH~~~~iiH~D 150 (460)
+ ...++||||++ ++|.+++... +..+++..+ ..++.||+.||+|||+++ |+|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-ivHrD 219 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-LVHGH 219 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-EEETT
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-CccCc
Confidence 3 23799999998 8999999753 223455555 677799999999999999 99999
Q ss_pred ccCCcEEEcCCCCeEEccCCCcccCCCCC-CccCCCcccCcccccc--CCCCCCCceehHHHHHHHHhhCCCCCCChhhh
Q 012608 151 LNAYRILFDEDGNPRLSTFGLMKNSRDGK-SYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIPPSHALD 227 (460)
Q Consensus 151 ikp~Nill~~~~~~kl~DFg~a~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~ 227 (460)
|||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 99999999999999999999998776554 5667899999999987 66899999999999999999999998765322
Q ss_pred hhhhccc---cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 228 LIRDRNL---QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 228 ~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
....... ...............+++.+.+||.+||+.||++|||+.++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111110 1111111111223467899999999999999999999999986
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=347.44 Aligned_cols=248 Identities=17% Similarity=0.223 Sum_probs=201.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC------CCCccceeeeEEeeCCeeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL------RNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~~~~~~~~l 99 (460)
+|++++.||+|+||.||+|.. .+++.||||+++... .....+.+|+.+++.+ .|+||+++++++...+..++
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 488999999999999999985 458999999986532 1245678888888887 57799999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC--eEEccCCCcccCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN--PRLSTFGLMKNSRD 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~--~kl~DFg~a~~~~~ 177 (460)
||||+. ++|.+++.......+++..+..++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++.....
T Consensus 177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR-IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT-EECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 999996 69999987655567999999999999999999999999 999999999999998887 99999999876544
Q ss_pred C-CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc-------------------
Q 012608 178 G-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML------------------- 237 (460)
Q Consensus 178 ~-~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~------------------- 237 (460)
. ....+|+.|+|||++.+..++.++|||||||++|+|+||..||.+..............
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~ 334 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBC
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccC
Confidence 3 45678999999999998899999999999999999999999987653321110000000
Q ss_pred ----c---------c-----------------c----cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 238 ----T---------D-----------------S----CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 238 ----~---------~-----------------~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. + + .+...++...++.+.+||.+||+.||.+|||+.++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp TTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence 0 0 0 0000011233678999999999999999999999998
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=351.00 Aligned_cols=253 Identities=16% Similarity=0.160 Sum_probs=205.0
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCC-CccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..|++++.||+|+||.||+|.. .+|+.||||++..... ...+.+|+.+++.++| ++|+.+..++...+..++||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 4689999999999999999995 5699999998865442 3468899999999976 6666777777788889999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE---cCCCCeEEccCCCcccCCCCC-
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF---DEDGNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill---~~~~~~kl~DFg~a~~~~~~~- 179 (460)
+ |++|.+++.. ....+++..++.|+.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~g-IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSKS-FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCC-EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 8999999864 3467999999999999999999999999 9999999999999 588999999999998654332
Q ss_pred ----------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh---hhccccccccccccCCC
Q 012608 180 ----------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI---RDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 180 ----------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~ 246 (460)
...||+.|+|||.+.+..++.++|||||||++|+|++|+.||........ .......... .....+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~~l 240 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVA-TSIEAL 240 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHH-SCHHHH
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccc-ccHHHH
Confidence 55789999999999998999999999999999999999999865321100 0000000000 000111
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
...++.++.+|+.+||+.+|.+||++.+|++.|+.+..
T Consensus 241 ~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 241 CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 23456899999999999999999999999999988754
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=329.31 Aligned_cols=255 Identities=20% Similarity=0.268 Sum_probs=199.8
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc--CCc--EEEEEEecCCCCC---CHHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE--NQR--RIAVKRFNRMAWP---DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
+..+|++++.||+|+||+||+|.+. +++ .||||+++..... ..+.+.+|+.++++++||||+++++++..++
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 3457999999999999999999842 333 6899998765322 2567899999999999999999999987654
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++....
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~-i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred ceeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC-cccCCCchheEEEcCCCCEEEcccccccccc
Confidence 88999999999999998652 356899999999999999999999999 9999999999999999999999999987664
Q ss_pred CCC-------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCc
Q 012608 177 DGK-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 177 ~~~-------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
... ...+|..|+|||.+.+..++.++||||||+++|+|++ |..||............... ......+.
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~ 248 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPE 248 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCT
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc----CCCCCCCc
Confidence 332 2346778999999988889999999999999999999 99888765433322221111 11112345
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 249 DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 6778999999999999999999999999999887643
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=363.20 Aligned_cols=244 Identities=21% Similarity=0.257 Sum_probs=202.8
Q ss_pred cccCCCCCCeEEEEEE---cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKL---ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
++||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|+.++++++||||+++++++. .+..++||||++|
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 3699999999999964 34688999999765432 2578999999999999999999999986 4568899999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-------
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK------- 179 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~------- 179 (460)
++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 454 g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~-iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCC-EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 999999963 467999999999999999999999999 9999999999999999999999999987654322
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+............. .....+..+++++.+||
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~~li 605 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----ERMGCPAGCPREMYDLM 605 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHH
Confidence 2345678999999998899999999999999999998 99998765443332222111 11234556789999999
Q ss_pred HHHcccCCCCCCChhHHHHHhccccc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.+||+.||.+|||+.++++.|+.+..
T Consensus 606 ~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 606 NLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 99999999999999999999987653
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=340.36 Aligned_cols=253 Identities=19% Similarity=0.266 Sum_probs=202.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeC-----CeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 98 (460)
..|++++.||+|+||.||++.. .+++.||||++....... .+.+.+|+.++++++||||+++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 3689999999999999999995 468999999997543222 46789999999999999999999998755 3689
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||+. ++|.+++. .+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 107 iv~e~~~-~~L~~~l~---~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEECCS-EEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEcccC-cCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 9999997 59999885 356999999999999999999999999 999999999999999999999999998765422
Q ss_pred -------CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc------------
Q 012608 179 -------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT------------ 238 (460)
Q Consensus 179 -------~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~------------ 238 (460)
....||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+...............
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 345789999999987654 489999999999999999999999876533221111100000
Q ss_pred -------------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 239 -------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 239 -------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.........+.+++++.+|+.+||+.||.+|||+.++++ .++...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~~~~ 319 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA--HPYLEQ 319 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT--SGGGTT
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc--Ccchhh
Confidence 000001122346788999999999999999999999998 444443
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=337.19 Aligned_cols=252 Identities=18% Similarity=0.199 Sum_probs=191.2
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CCccceeeeEEe--------eCC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCC--------EGD 95 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~--------~~~ 95 (460)
.+|++++.||+|+||.||++.. .+|+.||||++........+.+.+|+.+++++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 3689999999999999999995 469999999986655444667899999999995 999999999984 334
Q ss_pred eeEEEEEcCCCCCHHhhhhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 96 ERLLVAEYMPNETLAKHLFH-WETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
..++||||+. |+|.+++.. ...+.+++..++.++.||+.||.|||+++ +|+||||||+|||++.++.+||+|||++.
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 5789999996 789888764 23457999999999999999999999985 49999999999999999999999999998
Q ss_pred cCCCCC----------------CccCCCcccCcccc---ccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc
Q 012608 174 NSRDGK----------------SYSTNLAFTPPEYL---RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL 234 (460)
Q Consensus 174 ~~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 234 (460)
...... ...+|+.|+|||++ .+..++.++|||||||++|+|++|..||.............
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 266 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKY 266 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------C
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCcc
Confidence 654322 33578999999998 55668899999999999999999999986543322211111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
........+..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 267 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 267 --------SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp --------CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred --------cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11122344567899999999999999999999999999887643
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=335.53 Aligned_cols=261 Identities=14% Similarity=0.206 Sum_probs=202.8
Q ss_pred CCccccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccc
Q 012608 8 PSFREFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLT 85 (460)
Q Consensus 8 ~~~~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv 85 (460)
.+++.+++.++.. ....|++++.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.+++++ +||||+
T Consensus 9 ~~~~~~~~~~l~~---~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~ 84 (326)
T 2x7f_A 9 RSLDEIDLSALRD---PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIA 84 (326)
T ss_dssp -------CCCCCC---CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBC
T ss_pred CcchhccchhccC---CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCee
Confidence 3445555555433 345678889999999999999995 579999999987543 3457899999999999 899999
Q ss_pred eeeeEEee------CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc
Q 012608 86 NLLGCCCE------GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159 (460)
Q Consensus 86 ~~~~~~~~------~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~ 159 (460)
++++++.. .+..++||||++|++|.+++.......+++..++.++.||+.||.|||+++ |+|+||||+||+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~ 163 (326)
T 2x7f_A 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK-VIHRDIKGQNVLLT 163 (326)
T ss_dssp CEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEC
T ss_pred eeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCcHHHEEEc
Confidence 99999976 467899999999999999997655567999999999999999999999999 99999999999999
Q ss_pred CCCCeEEccCCCcccCCCC----CCccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh
Q 012608 160 EDGNPRLSTFGLMKNSRDG----KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR 230 (460)
Q Consensus 160 ~~~~~kl~DFg~a~~~~~~----~~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~ 230 (460)
.++.+||+|||++...... ....+|+.|+|||.+. +..++.++|||||||++|+|++|..||.........
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 243 (326)
T 2x7f_A 164 ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 243 (326)
T ss_dssp TTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred CCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHH
Confidence 9999999999998765432 3456899999999986 456889999999999999999999988654322111
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 231 DRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
... .........+..++..+.++|.+||..||.+|||+.++++
T Consensus 244 ~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 244 FLI----PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHH----HHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHh----hcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111 1111111223456789999999999999999999999987
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=331.86 Aligned_cols=250 Identities=20% Similarity=0.242 Sum_probs=203.3
Q ss_pred cccchhcccCCCCCCeEEEEEE--cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcC---CCCccceeeeEEe-----e
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL--ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQL---RNNRLTNLLGCCC-----E 93 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~-----~ 93 (460)
..|++++.||+|+||.||+|.. .+|+.||+|+++.... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 5689999999999999999996 4688999999865332 2234677888888777 8999999999987 4
Q ss_pred CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 94 ~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
....++||||++ ++|.+++.......+++..++.++.|++.||.|||++| |+||||||+||+++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g-i~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999998 69999997655567999999999999999999999999 9999999999999999999999999987
Q ss_pred cCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc--------------
Q 012608 174 NSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM-------------- 236 (460)
Q Consensus 174 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~-------------- 236 (460)
..... ....+|+.|+|||.+.+..++.++|||||||++|+|++|+.||...............
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 3456899999999999888999999999999999999999998765332211111000
Q ss_pred -------cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 -------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 -------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.........+...++..+.+++.+||+.||.+|||+.++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00001112234567889999999999999999999999996
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=337.25 Aligned_cols=253 Identities=16% Similarity=0.214 Sum_probs=203.5
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhc--CCCCccceeeeEEeeCC----eeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQ--LRNNRLTNLLGCCCEGD----ERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~~iv~~~~~~~~~~----~~~l 99 (460)
..|++.+.||+|+||.||+|.. +|+.||||++... ....+.+|++++.. ++||||+++++++...+ ..++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l 117 (342)
T 1b6c_B 42 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 117 (342)
T ss_dssp HHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEE
T ss_pred ccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEE
Confidence 3578899999999999999997 5899999998643 35678889999887 68999999999998775 7899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCT--------SKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
||||+++++|.+++.. ..+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||+
T Consensus 118 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~-ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 118 VSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp EECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC-eeeCCCCHHHEEECCCCCEEEEECCC
Confidence 9999999999999963 46999999999999999999999 788 99999999999999999999999999
Q ss_pred cccCCCC--------CCccCCCcccCccccccC------CCCCCCceehHHHHHHHHhhC----------CCCCCChhh-
Q 012608 172 MKNSRDG--------KSYSTNLAFTPPEYLRTG------RVTPESVIYSFGTLLLDLLSG----------KHIPPSHAL- 226 (460)
Q Consensus 172 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~sDi~slG~~l~el~tg----------~~p~~~~~~- 226 (460)
+...... ....||+.|+|||.+.+. .++.++|||||||++|+|+|| ..||.....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 273 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence 8765432 344689999999999765 234689999999999999999 566644211
Q ss_pred ----hhhhhccccccccccccC-CCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 227 ----DLIRDRNLQMLTDSCLEG-QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 227 ----~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
..+..........+.... .....++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 274 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 111111111111111111 112356788999999999999999999999999999887653
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=335.50 Aligned_cols=251 Identities=17% Similarity=0.233 Sum_probs=199.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCee-----
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER----- 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~----- 97 (460)
..|.+++.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 4688899999999999999995 469999999997654332 46788999999999999999999999876654
Q ss_pred -EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 98 -LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 98 -~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
++||||+. ++|.+.+. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999998 68888773 45999999999999999999999999 9999999999999999999999999998655
Q ss_pred CC-CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc------------------
Q 012608 177 DG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------ 236 (460)
Q Consensus 177 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~------------------ 236 (460)
.. ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.............
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 43 45678999999999987 67899999999999999999999999765322111111000
Q ss_pred -----ccccc--ccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 237 -----LTDSC--LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 237 -----~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
..... ......+.+++.+.+||.+||+.||.+|||+.++++ .++..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~f~ 328 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT--HPFFE 328 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT--SGGGT
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc--Ccccc
Confidence 00000 000112345789999999999999999999999998 44443
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=328.73 Aligned_cols=247 Identities=19% Similarity=0.211 Sum_probs=189.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
...+|++++.||+|+||.||++.. .+|+.||+|+++...... .+.+..+...++.++||||+++++++..++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 346789999999999999999995 579999999997653222 23344555568888999999999999999999999
Q ss_pred EEcCCCCCHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 101 AEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
|||++ ++|.+++.. .....+++..++.++.|++.||.|||++ + |+||||||+||+++.++.+||+|||++.....
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC-CCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC-eecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 99998 588777653 1456799999999999999999999998 8 99999999999999999999999999876544
Q ss_pred C---CCccCCCcccCcccc----ccCCCCCCCceehHHHHHHHHhhCCCCCCChhhh--hhhhccccccccccccCCCCc
Q 012608 178 G---KSYSTNLAFTPPEYL----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD--LIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 178 ~---~~~~~t~~y~aPE~~----~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 248 (460)
. ....+|+.|+|||.+ .+..++.++|||||||++|+|+||..||...... ....... .........
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~ 237 (290)
T 3fme_A 163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE-----EPSPQLPAD 237 (290)
T ss_dssp -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH-----SCCCCCCTT
T ss_pred cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc-----cCCCCcccc
Confidence 3 234689999999996 4556888999999999999999999998642211 1111111 111112234
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+++++.+++.+||+.||.+|||+.++++
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 238 KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 56789999999999999999999999987
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=326.57 Aligned_cols=252 Identities=17% Similarity=0.152 Sum_probs=206.5
Q ss_pred HhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---------HHHHHHHHHHHhcCC-CCccceeee
Q 012608 21 ATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---------PRQFLEEARSVGQLR-NNRLTNLLG 89 (460)
Q Consensus 21 ~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-h~~iv~~~~ 89 (460)
...-+..|++++.||+|+||.||++.. .+|+.||||+++...... .+.+.+|+.+++++. ||||+++++
T Consensus 12 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (298)
T 1phk_A 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 91 (298)
T ss_dssp ---CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred CcchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence 345567899999999999999999995 468999999997654221 346889999999995 999999999
Q ss_pred EEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccC
Q 012608 90 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 169 (460)
Q Consensus 90 ~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DF 169 (460)
++..++..++||||++|++|.+++.. ...+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 92 TYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCC
T ss_pred eeccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCcceEEEcCCCcEEEecc
Confidence 99999999999999999999999874 457899999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC---CCccCCCcccCccccc------cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccc
Q 012608 170 GLMKNSRDG---KSYSTNLAFTPPEYLR------TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDS 240 (460)
Q Consensus 170 g~a~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 240 (460)
|++...... ....+|+.|+|||.+. ...++.++||||||+++|+|++|..||.................
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 246 (298)
T 1phk_A 169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY-- 246 (298)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--
T ss_pred cchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCc--
Confidence 998765433 3456899999999985 34578899999999999999999999866543322221111110
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.........++..+.+++.+||+.||.+|||+.++++
T Consensus 247 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 247 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0111122356789999999999999999999999987
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=334.88 Aligned_cols=246 Identities=16% Similarity=0.185 Sum_probs=195.6
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--------CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--------PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
..|++++.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.++++++||||+++++++..++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 3688999999999999999995 4689999999865431 12345889999999999999999999987654
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC---eEEccCCCcc
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFGLMK 173 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~DFg~a~ 173 (460)
.++||||++|++|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++. +||+|||++.
T Consensus 89 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG-IIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 899999999999999886 3567999999999999999999999999 999999999999986654 9999999998
Q ss_pred cCCCCC---CccCCCcccCccccc---cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh-hhhccccccccccccCCC
Q 012608 174 NSRDGK---SYSTNLAFTPPEYLR---TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQF 246 (460)
Q Consensus 174 ~~~~~~---~~~~t~~y~aPE~~~---~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 246 (460)
...... ...||+.|+|||++. ...++.++|||||||++|+|++|..||....... .......... ......
T Consensus 166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~ 243 (322)
T 2ycf_A 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY--NFIPEV 243 (322)
T ss_dssp ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCC--CCCHHH
T ss_pred ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCcc--ccCchh
Confidence 765442 346899999999974 4568899999999999999999999986542211 0000000000 000011
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...++..+.+++.+||+.||.+|||+.++++
T Consensus 244 ~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 244 WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 2345688999999999999999999999986
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-43 Score=344.43 Aligned_cols=245 Identities=22% Similarity=0.261 Sum_probs=193.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeC----C--eeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG----D--ERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~--~~~l 99 (460)
.|++++.||+|+||+||+|.. .+|+.||||++.... ..+.+|++++++++||||+++++++... + ..++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 588999999999999999996 469999999986543 2344799999999999999999998542 1 3679
Q ss_pred EEEcCCCCCHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-CCeEEccCCCcccCC
Q 012608 100 VAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-GNPRLSTFGLMKNSR 176 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-~~~kl~DFg~a~~~~ 176 (460)
||||+++ +|.+.+.. .....+++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9999985 66665542 23567999999999999999999999999 9999999999999955 568999999998654
Q ss_pred C---CCCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-----------------
Q 012608 177 D---GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ----------------- 235 (460)
Q Consensus 177 ~---~~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~----------------- 235 (460)
. .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+............
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 3 2356789999999999765 689999999999999999999999976532211110000
Q ss_pred -c-----cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 -M-----LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 -~-----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. .....+...++...++++.+||.+||+.||.+|||+.++++
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0 00000111133456789999999999999999999999987
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=339.43 Aligned_cols=251 Identities=20% Similarity=0.245 Sum_probs=196.4
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCe------eEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE------RLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------~~l 99 (460)
..|++++.||+|+||+||+|....+..||+|++..... ...+|+++++.++||||+++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46899999999999999999987767799998864332 23379999999999999999999865433 789
Q ss_pred EEEcCCCCCHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc-CCCCeEEccCCCcccCC
Q 012608 100 VAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~DFg~a~~~~ 176 (460)
||||++++ +.+.+.. .....+++..++.++.||+.||.|||+++ |+||||||+|||++ .++.+||+|||+++...
T Consensus 116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~-ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG-ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99999865 4333321 13567999999999999999999999999 99999999999999 78999999999997653
Q ss_pred C---CCCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc-------------------
Q 012608 177 D---GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN------------------- 233 (460)
Q Consensus 177 ~---~~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~------------------- 233 (460)
. .....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+..........
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 3 3456789999999998765 4899999999999999999999999765322111100
Q ss_pred ----ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 234 ----LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 234 ----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
........+...++...++++.+|+.+||+.||.+|||+.++++ .++..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~--hp~f~ 326 (394)
T 4e7w_A 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC--HPFFD 326 (394)
T ss_dssp SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT--SGGGS
T ss_pred hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc--Chhhh
Confidence 00001111111233457789999999999999999999999997 44443
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-43 Score=338.03 Aligned_cols=255 Identities=15% Similarity=0.196 Sum_probs=196.2
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC-----------HHHHHHHHHHHhcCCCCccceeeeEEee-
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD-----------PRQFLEEARSVGQLRNNRLTNLLGCCCE- 93 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 93 (460)
+.|++++.||+|+||.||+|...+|+.||||++....... .+.+.+|+.++++++||||+++++++..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence 4577888899999999999998789999999986543321 2679999999999999999999999854
Q ss_pred ----CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccC
Q 012608 94 ----GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 169 (460)
Q Consensus 94 ----~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DF 169 (460)
....++||||++ ++|.+.+.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+||
T Consensus 102 ~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~NIl~~~~~~~kl~Df 178 (362)
T 3pg1_A 102 EEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG-VVHRDLHPGNILLADNNDITICDF 178 (362)
T ss_dssp CTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCT
T ss_pred cCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc-CEecCCChHHEEEcCCCCEEEEec
Confidence 236899999998 688887764 3457999999999999999999999999 999999999999999999999999
Q ss_pred CCcccCCCC---CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc--------
Q 012608 170 GLMKNSRDG---KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-------- 237 (460)
Q Consensus 170 g~a~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-------- 237 (460)
|++...... ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||................
T Consensus 179 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 258 (362)
T 3pg1_A 179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258 (362)
T ss_dssp TC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred CcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHh
Confidence 998754432 34568899999999876 568999999999999999999999997653322111110000
Q ss_pred ---------------c---cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 238 ---------------T---DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 238 ---------------~---~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
. .........+..++.+.+++.+||+.||.+|||+.++++ .++...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~--hp~f~~ 322 (362)
T 3pg1_A 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR--HPYFES 322 (362)
T ss_dssp HHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT--SGGGTT
T ss_pred hhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc--Cchhhh
Confidence 0 000001122345678999999999999999999999998 444433
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=333.38 Aligned_cols=246 Identities=14% Similarity=0.160 Sum_probs=175.5
Q ss_pred ccchhc-ccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee----CCeeEEE
Q 012608 27 VENIVS-EHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLV 100 (460)
Q Consensus 27 ~~~i~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv 100 (460)
+|++++ .||+|+||.||++... +|+.||||++... ..........++.++||||+++++++.. +...++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 688866 4999999999999954 6999999998642 2233333344666799999999999876 4458999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCcccCCC
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~~~~ 177 (460)
|||++|++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||++.....
T Consensus 105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~-ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN-IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 99999999999998655567999999999999999999999999 999999999999975 45599999999976543
Q ss_pred C--CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc--cccccCCCCchhHHH
Q 012608 178 G--KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--DSCLEGQFTDDDGTE 253 (460)
Q Consensus 178 ~--~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 253 (460)
. ....+|+.|+|||.+.+..++.++|||||||++|+|++|..||................. ...........++++
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (336)
T 3fhr_A 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSED 263 (336)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHH
T ss_pred cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHH
Confidence 3 345679999999999888899999999999999999999999866543322111111111 111111223457789
Q ss_pred HHHHHHHHcccCCCCCCChhHHHH
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+.+++.+||+.||.+|||+.++++
T Consensus 264 ~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 264 AKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCChhHCcCHHHHhc
Confidence 999999999999999999999998
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=334.96 Aligned_cols=247 Identities=15% Similarity=0.220 Sum_probs=198.5
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeC-----CeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 98 (460)
++|++++.||+|+||.||+|... +|+.||||++...... ....+.+|+.++++++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 46889999999999999999954 6999999999654322 245688999999999999999999998654 6789
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~ 178 (460)
+||||+. ++|.+++.. +.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~-ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN-VIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC-eecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999997 689998853 57999999999999999999999999 999999999999999999999999998765421
Q ss_pred --------------CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc--------
Q 012608 179 --------------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------- 235 (460)
Q Consensus 179 --------------~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------- 235 (460)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 23467899999998764 6689999999999999999999999876542211100000
Q ss_pred ----c------------cc--cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 ----M------------LT--DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ----~------------~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. +. .........+.+++++.+++.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 00 000000112356789999999999999999999999998
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=330.55 Aligned_cols=252 Identities=17% Similarity=0.201 Sum_probs=183.0
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHH-HHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEAR-SVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~-~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
...+|++++.||+|+||.||++.. .+|+.||||+++..... ....+..|+. +++.++||||+++++++..++..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 347789999999999999999996 46999999999765422 2345666666 77778999999999999999999999
Q ss_pred EEcCCCCCHHhhhhc---cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 101 AEYMPNETLAKHLFH---WETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
|||++| +|.+++.. .....+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++....
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~-ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS-CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC-EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 999984 88777652 2356789999999999999999999998 8 9999999999999999999999999987654
Q ss_pred CC---CCccCCCcccCcccc----ccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 177 DG---KSYSTNLAFTPPEYL----RTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 177 ~~---~~~~~t~~y~aPE~~----~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
.. ....||+.|+|||.+ .+..++.++|||||||++|+|++|..||..................+.........
T Consensus 178 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3aln_A 178 DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEERE 257 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCC
T ss_pred cccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCccccc
Confidence 33 233689999999998 45568999999999999999999999986532211110111111111112222345
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+.+++.+||+.||.+|||+.++++
T Consensus 258 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 258 FSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 7789999999999999999999999986
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=332.22 Aligned_cols=247 Identities=17% Similarity=0.216 Sum_probs=193.7
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEe------------
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCC------------ 92 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------------ 92 (460)
..|++++.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 46899999999999999999965 59999999987655444678999999999999999999999873
Q ss_pred --eCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc-CCCCeEEccC
Q 012608 93 --EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTF 169 (460)
Q Consensus 93 --~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~DF 169 (460)
..+..++||||++ ++|.+++. .+++++..++.++.|++.||.|||+++ |+||||||+||+++ +++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSAN-VLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHEEEcCCCCeEEEccC
Confidence 3467899999998 69999884 467999999999999999999999999 99999999999997 5678999999
Q ss_pred CCcccCCCC-------CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccc---
Q 012608 170 GLMKNSRDG-------KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--- 238 (460)
Q Consensus 170 g~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~--- 238 (460)
|++...... ....+|..|+|||.+.+ ..++.++|||||||++|+|++|+.||.................
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 998865422 23456889999998865 5688999999999999999999999876533221111100000
Q ss_pred ---------------------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 239 ---------------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 239 ---------------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.........+.++.++.+++.+||+.||.+|||+.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 000001122356789999999999999999999999987
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=330.93 Aligned_cols=249 Identities=17% Similarity=0.181 Sum_probs=203.6
Q ss_pred cccchhcccCCCCCCeEEEEEE--cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCc------cceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL--ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR------LTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~ 97 (460)
.+|++++.||+|+||.||++.. .+|+.||||+++... ...+.+.+|+.+++.++|++ |+++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4799999999999999999985 368999999986432 22467889999999997654 99999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-----------------
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE----------------- 160 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~----------------- 160 (460)
++||||+ +++|.+++......++++..+..++.|++.||.|||+++ |+||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK-LTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 799999997655567899999999999999999999999 999999999999987
Q ss_pred --CCCeEEccCCCcccCCCC-CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc---c
Q 012608 161 --DGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---L 234 (460)
Q Consensus 161 --~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~---~ 234 (460)
++.+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|+|++|..||............ .
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 678999999998865543 4567899999999999888999999999999999999999998764332111000 0
Q ss_pred cccc-----------------------------------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 QMLT-----------------------------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 ~~~~-----------------------------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.... ............++.+.+++.+||+.||.+|||+.++++
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 0000 000001123456788999999999999999999999986
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-42 Score=329.17 Aligned_cols=246 Identities=17% Similarity=0.220 Sum_probs=197.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCe------
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE------ 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------ 96 (460)
..|.+.+.||+|+||.||+|.. .+|+.||||++....... .+.+.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4688899999999999999995 469999999997654332 4578899999999999999999999977654
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.++||||++ ++|.+++. ..+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||++....
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~-ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG-VVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 68888773 35999999999999999999999999 9999999999999999999999999988654
Q ss_pred CC-CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc--------------------
Q 012608 177 DG-KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-------------------- 234 (460)
Q Consensus 177 ~~-~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------------------- 234 (460)
.. ....+|+.|+|||.+.+ ..++.++|||||||++|+|++|..||.+...........
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 33 34578999999999876 568999999999999999999999987643221111000
Q ss_pred ---ccccc--ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 ---QMLTD--SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 ---~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+.. ...........++++.+++.+||+.||.+|||+.++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 00011233467889999999999999999999999987
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=324.86 Aligned_cols=244 Identities=19% Similarity=0.264 Sum_probs=194.4
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee-----------
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE----------- 93 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----------- 93 (460)
++|++++.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++++++||||+++++++..
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 3588999999999999999995 479999999986422 234678999999999999999999998865
Q ss_pred --CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 94 --GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 94 --~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
.+..++||||++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|||+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG-IIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC-eecccCCHHhEEEcCCCCEEEeeCcc
Confidence 3568999999999999999975 3456788999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCC------------------CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhh-hhhhh
Q 012608 172 MKNSRDG------------------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRD 231 (460)
Q Consensus 172 a~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~-~~~~~ 231 (460)
+...... ....+|+.|+|||.+.+. .++.++|||||||++|+|++ |+..... .....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~ 239 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHH
Confidence 8765321 234578999999999764 68999999999999999998 4433211 11111
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 232 RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.... .....+..++...++.+.+++.+||+.||.+|||+.++++
T Consensus 240 ~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 240 KLRS--VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHS--TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hccc--cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111 1112233455667788999999999999999999999998
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=356.66 Aligned_cols=251 Identities=20% Similarity=0.268 Sum_probs=206.2
Q ss_pred cccchhcccCCCCCCeEEEEEEcC----CcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
..|++.+.||+|+||.||+|.... +..||||+++...... .+.+.+|+.++++++||||+++++++. ++..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 457888999999999999998532 4679999987543222 467999999999999999999999985 4668999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC-
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK- 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~- 179 (460)
|||++|++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999999865 3456899999999999999999999999 9999999999999999999999999998765432
Q ss_pred ----CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 180 ----SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 180 ----~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
...+|+.|+|||.+.+..++.++|||||||++|||++ |..||.+............. .....+..+++.+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT-----CCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----CCCCCCccccHHH
Confidence 2345788999999988889999999999999999997 88888764433222211111 1122455677899
Q ss_pred HHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 255 VRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.+++.+||..||.+|||+.++++.|+.+..
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999987753
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-42 Score=330.90 Aligned_cols=258 Identities=20% Similarity=0.225 Sum_probs=190.8
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCe-----
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE----- 96 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 96 (460)
..+..|++++.||+|+||.||+|.. .+|+.||||++.... .....+.++++.+..++||||+++++++...+.
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 3345788899999999999999995 469999999986543 234567788889999999999999999865433
Q ss_pred --eEEEEEcCCCCCHHhhhhc--cCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCcccccccCCcEEEcC-CCCeEEccC
Q 012608 97 --RLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCT--SKGRALYHDLNAYRILFDE-DGNPRLSTF 169 (460)
Q Consensus 97 --~~lv~e~~~g~sL~~~~~~--~~~~~~~~~~~~~i~~qi~~~l~~lH--~~~~iiH~Dikp~Nill~~-~~~~kl~DF 169 (460)
.++||||++| +|.+.+.. .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~-ivH~Dlkp~NIll~~~~~~~kl~Df 176 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDF 176 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC-CBCSCCCGGGEEEETTTTEEEECCC
T ss_pred eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC-eecCcCCHHHEEEeCCCCcEEEeeC
Confidence 7899999985 55444332 24567899999999999999999999 898 999999999999996 899999999
Q ss_pred CCcccCCCC---CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc--------
Q 012608 170 GLMKNSRDG---KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-------- 237 (460)
Q Consensus 170 g~a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-------- 237 (460)
|++...... ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||................
T Consensus 177 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
T 3e3p_A 177 GSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256 (360)
T ss_dssp TTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred CCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHH
Confidence 999866543 3456899999999987654 8999999999999999999999987653322111110000
Q ss_pred ------------------ccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 238 ------------------TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 238 ------------------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.-...........++++.+|+.+||+.||.+|||+.++++ .++...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~--hp~f~~ 320 (360)
T 3e3p_A 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC--HPYFDE 320 (360)
T ss_dssp HHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT--SGGGGG
T ss_pred HhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc--Cccccc
Confidence 0000011223346789999999999999999999999997 444443
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-42 Score=336.13 Aligned_cols=254 Identities=16% Similarity=0.239 Sum_probs=185.1
Q ss_pred cchh-cccCCCCCCeEEEEEEc---CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee--CCeeEEEE
Q 012608 28 ENIV-SEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLLVA 101 (460)
Q Consensus 28 ~~i~-~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 101 (460)
|++. ++||+|+||+||+|... +++.||||++.... ....+.+|+.++++++||||+++++++.. +...++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 5554 47999999999999954 57899999997543 34678899999999999999999999954 67899999
Q ss_pred EcCCCCCHHhhhhcc-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE----cCCCCeEEccCC
Q 012608 102 EYMPNETLAKHLFHW-------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF----DEDGNPRLSTFG 170 (460)
Q Consensus 102 e~~~g~sL~~~~~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill----~~~~~~kl~DFg 170 (460)
||+. ++|.+++... ....+++..++.++.||+.||.|||+++ |+||||||+|||+ +.++.+||+|||
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~-ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-EeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 9997 5787777521 1235899999999999999999999999 9999999999999 677899999999
Q ss_pred CcccCCCC-------CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh---------hcc
Q 012608 171 LMKNSRDG-------KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR---------DRN 233 (460)
Q Consensus 171 ~a~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~---------~~~ 233 (460)
+++..... ....||+.|+|||++.+. .++.++|||||||++|+|++|..||......... ...
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 99865432 345789999999999874 4899999999999999999999998643221000 000
Q ss_pred cccc------------------------cccccc--------CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcc
Q 012608 234 LQML------------------------TDSCLE--------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 234 ~~~~------------------------~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~ 281 (460)
...+ ...... .......++.+.+||.+||+.||.+|||++++++ .+
T Consensus 258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~--hp 335 (405)
T 3rgf_A 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ--DP 335 (405)
T ss_dssp HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT--SG
T ss_pred HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc--Ch
Confidence 0000 000000 0001112567899999999999999999999998 56
Q ss_pred ccccCC
Q 012608 282 LQKETE 287 (460)
Q Consensus 282 ~~~~~~ 287 (460)
+.....
T Consensus 336 ~f~~~~ 341 (405)
T 3rgf_A 336 YFLEDP 341 (405)
T ss_dssp GGTSSS
T ss_pred hhccCC
Confidence 655443
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=322.66 Aligned_cols=246 Identities=19% Similarity=0.196 Sum_probs=202.8
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCC--CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMA--WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
..|++++.||+|+||.||++... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 46899999999999999999964 69999999986543 2346789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC---CCeEEccCCCcccCCCCC
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED---GNPRLSTFGLMKNSRDGK 179 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~---~~~kl~DFg~a~~~~~~~ 179 (460)
|++|++|.+.+.. ...+++..++.++.|++.||.|||+++ ++|+||||+||+++.+ +.+||+|||++.......
T Consensus 102 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN-IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred ccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999999988864 356899999999999999999999999 9999999999999754 469999999987655432
Q ss_pred ---CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 180 ---SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 180 ---~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
...+|+.|+|||.+.+ .++.++||||||+++|+|++|..||.................. ........+++++.+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 255 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA--FDLPQWRTISDDAKD 255 (287)
T ss_dssp SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--CCSGGGTTSCHHHHH
T ss_pred ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCchhhhhcCHHHHH
Confidence 3357889999999874 5889999999999999999999998765433322211111000 000111346789999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||+.||.+|||+.++++
T Consensus 256 li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 256 LIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHcccChhhCcCHHHHhc
Confidence 999999999999999999997
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=336.53 Aligned_cols=249 Identities=17% Similarity=0.223 Sum_probs=200.1
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-----------CCccceeeeEEee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----------NNRLTNLLGCCCE 93 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~~iv~~~~~~~~ 93 (460)
..|++++.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.+++++. ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5799999999999999999995 579999999986432 12467889999999886 8999999999876
Q ss_pred CC----eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEc------CCC
Q 012608 94 GD----ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFD------EDG 162 (460)
Q Consensus 94 ~~----~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~------~~~ 162 (460)
.+ ..++|||++ |++|.+++.......+++..+..++.||+.||.|||++ + |+||||||+|||++ ..+
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~-ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC-EEecCCChHHeEEeccCCCcCcc
Confidence 54 689999999 79999999876667799999999999999999999998 8 99999999999994 344
Q ss_pred CeEEccCCCcccCCCC-CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhh------hccc-
Q 012608 163 NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIR------DRNL- 234 (460)
Q Consensus 163 ~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~------~~~~- 234 (460)
.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|+|+||..||......... ....
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence 7999999999865543 4567899999999999888999999999999999999999998654211000 0000
Q ss_pred --------------------------ccccc---------ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 --------------------------QMLTD---------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 --------------------------~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..... ......++...+.++.+||.+||+.||.+|||+.++++
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 00000 00011345677889999999999999999999999998
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-43 Score=342.70 Aligned_cols=249 Identities=14% Similarity=0.187 Sum_probs=199.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC--------CCccceeeeEEe----
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR--------NNRLTNLLGCCC---- 92 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~~iv~~~~~~~---- 92 (460)
..|++++.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 5689999999999999999984 568999999986432 22467889999999995 788999999987
Q ss_pred eCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCC---------
Q 012608 93 EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDG--------- 162 (460)
Q Consensus 93 ~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~--------- 162 (460)
.+...++||||+. ++|.+.+.......+++..++.++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g-ivHrDikp~NIll~~~~~~~~~~~~~ 193 (397)
T 1wak_A 116 NGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR-IIHTDIKPENILLSVNEQYIRRLAAE 193 (397)
T ss_dssp TEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred CCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC-EecCCCCHHHeeEeccchhhhhhhhh
Confidence 4557899999995 6776666654556799999999999999999999998 8 99999999999998775
Q ss_pred ----------------------------------------CeEEccCCCcccCCCC-CCccCCCcccCccccccCCCCCC
Q 012608 163 ----------------------------------------NPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPE 201 (460)
Q Consensus 163 ----------------------------------------~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~ 201 (460)
.+||+|||++...... ....||+.|+|||++.+..++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence 7999999999765433 45578999999999998889999
Q ss_pred CceehHHHHHHHHhhCCCCCCChhhhhh-------h---h------------ccc-----------cccccc--------
Q 012608 202 SVIYSFGTLLLDLLSGKHIPPSHALDLI-------R---D------------RNL-----------QMLTDS-------- 240 (460)
Q Consensus 202 sDi~slG~~l~el~tg~~p~~~~~~~~~-------~---~------------~~~-----------~~~~~~-------- 240 (460)
+|||||||++|+|+||..||........ . . ... ......
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV 353 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence 9999999999999999999864321100 0 0 000 000000
Q ss_pred -cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 241 -CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 241 -~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......+...+..+.+||.+||+.||.+|||+.++++
T Consensus 354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0001234566788999999999999999999999987
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-42 Score=324.12 Aligned_cols=245 Identities=19% Similarity=0.276 Sum_probs=198.1
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCC--CCccceeeeEEeeCCeeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv 100 (460)
-..|++++.||+|+||.||++...+|+.||||++...... ..+.+.+|+.++++++ ||||+++++++..++..++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 3568999999999999999999878999999999765433 2467899999999996 59999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|| +.+++|.+++.. ...+++..++.++.|++.||.|||+++ |+||||||+|||+++ +.+||+|||++......
T Consensus 107 ~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~ 181 (313)
T 3cek_A 107 ME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG-IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTT 181 (313)
T ss_dssp EC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEEET-TEEEECCCSSSCC------
T ss_pred Ee-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcccEEEEC-CeEEEeeccccccccCccc
Confidence 99 557899999874 457899999999999999999999999 999999999999964 88999999999865432
Q ss_pred ----CCccCCCcccCcccccc-----------CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccccccc
Q 012608 179 ----KSYSTNLAFTPPEYLRT-----------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~-----------~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
....||+.|+|||.+.+ ..++.++||||||+++|+|++|..||......... ..........
T Consensus 182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~ 258 (313)
T 3cek_A 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHE 258 (313)
T ss_dssp --------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSC
T ss_pred cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH---HHHHHhcccc
Confidence 23468999999999865 36788999999999999999999988653221111 0111111222
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..++...+.++.+++.+||+.||.+|||+.++++
T Consensus 259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 259 IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 2344555789999999999999999999999997
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=329.54 Aligned_cols=240 Identities=19% Similarity=0.269 Sum_probs=202.8
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC------CHHHHHHHHHHHhcCC--CCccceeeeEEee
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLR--NNRLTNLLGCCCE 93 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~ 93 (460)
.--..|++++.||+|+||.||+|.. .+|+.||||+++..... ....+.+|+.++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3445689999999999999999984 56899999999764332 2346778999999995 5999999999999
Q ss_pred CCeeEEEEEcCCC-CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc-CCCCeEEccCCC
Q 012608 94 GDERLLVAEYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGL 171 (460)
Q Consensus 94 ~~~~~lv~e~~~g-~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~DFg~ 171 (460)
++..++|||++.+ ++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++ +++.+||+|||+
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~-ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CCcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-cEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 9999999999976 899999864 457899999999999999999999999 99999999999999 788999999999
Q ss_pred cccCCCC--CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCc
Q 012608 172 MKNSRDG--KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 172 a~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
+...... ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||...... ... ....+.
T Consensus 197 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~----------~~~~~~ 264 (320)
T 3a99_A 197 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI--IRG----------QVFFRQ 264 (320)
T ss_dssp CEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--HHC----------CCCCSS
T ss_pred ccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh--hcc----------cccccc
Confidence 8866543 34568999999999987665 67899999999999999999998654321 111 012344
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+++++.+++.+||+.||.+|||+.++++
T Consensus 265 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 265 RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 56789999999999999999999999988
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=326.75 Aligned_cols=237 Identities=20% Similarity=0.301 Sum_probs=195.1
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC------CHHHHHHHHHHHhcC----CCCccceeeeEEeeC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQL----RNNRLTNLLGCCCEG 94 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~~iv~~~~~~~~~ 94 (460)
.+|++++.||+|+||.||+|.. .+|+.||||+++..... ....+.+|+.++.++ +||||+++++++...
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 4689999999999999999984 56899999999765432 233466799999998 899999999999988
Q ss_pred CeeEEEEEc-CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc-CCCCeEEccCCCc
Q 012608 95 DERLLVAEY-MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD-EDGNPRLSTFGLM 172 (460)
Q Consensus 95 ~~~~lv~e~-~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~-~~~~~kl~DFg~a 172 (460)
+..++|||+ +.+++|.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||++
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG-VVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT-EECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999999999 789999999974 456999999999999999999999999 99999999999999 8899999999998
Q ss_pred ccCCCC--CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 173 KNSRDG--KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 173 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
...... ....+|..|+|||++.+..+ +.++||||||+++|+|++|+.||...... ... ...++..
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~----------~~~~~~~ 255 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI--LEA----------ELHFPAH 255 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--HHT----------CCCCCTT
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH--hhh----------ccCCccc
Confidence 865443 35568999999999877665 45899999999999999999988654221 111 1123456
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++..+.+++.+||+.||.+|||+.++++
T Consensus 256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 256 VSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 7789999999999999999999999998
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=331.64 Aligned_cols=196 Identities=17% Similarity=0.146 Sum_probs=170.4
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CC-----ccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NN-----RLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----~iv~~~~~~~~~~~~~ 98 (460)
.+|++++.||+|+||+||+|.. .+|+.||||+++... .....+.+|+.+++.+. |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 5688999999999999999995 468999999997432 12456788999998884 55 4999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCcccccccCCcEEEc--CCCCeEEccCCCccc
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--KGRALYHDLNAYRILFD--EDGNPRLSTFGLMKN 174 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~iiH~Dikp~Nill~--~~~~~kl~DFg~a~~ 174 (460)
+||||++ ++|.+++.......+++..+..++.|++.||.|||+ .+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~-ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC-EECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC-EEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 9999997 599999976555679999999999999999999995 57 99999999999995 578899999999987
Q ss_pred CCCC-CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCCh
Q 012608 175 SRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH 224 (460)
Q Consensus 175 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~ 224 (460)
.... ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||.+.
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543 4567899999999999888999999999999999999999999764
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=315.98 Aligned_cols=232 Identities=16% Similarity=0.145 Sum_probs=188.3
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
..|++++.||+|+||.||+|... +|+.||||++......+ .+.+.+|+.++.+++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 46899999999999999999964 59999999998765443 367999999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCc
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~ 181 (460)
||++|++|.+++. .+ .....+..++.|++.||.|||++| |+||||||+|||++.++.+||+++|.
T Consensus 111 e~~~g~~L~~~l~---~~-~~~~~~~~i~~ql~~aL~~lH~~g-ivH~Dikp~NIll~~~g~~kl~~~~~---------- 175 (286)
T 3uqc_A 111 EWIRGGSLQEVAD---TS-PSPVGAIRAMQSLAAAADAAHRAG-VALSIDHPSRVRVSIDGDVVLAYPAT---------- 175 (286)
T ss_dssp ECCCEEEHHHHHT---TC-CCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCSGGGEEEETTSCEEECSCCC----------
T ss_pred EecCCCCHHHHHh---cC-CChHHHHHHHHHHHHHHHHHHHCC-CccCCCCcccEEEcCCCCEEEEeccc----------
Confidence 9999999999984 23 355678899999999999999999 99999999999999999999986543
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc-ccccccCCCCchhHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML-TDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
++ .++.++|||||||++|+|+||+.||................ ............+++++.+++.+
T Consensus 176 ------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 242 (286)
T 3uqc_A 176 ------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242 (286)
T ss_dssp ------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred ------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence 32 36889999999999999999999987653321110000000 01111112334677899999999
Q ss_pred HcccCCCCCCChhHHHHHhccccccC
Q 012608 261 CLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
||+.||.+| |+.++++.|+.+....
T Consensus 243 ~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 243 SVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HcccCCccC-CHHHHHHHHHHHhccC
Confidence 999999999 9999999999886543
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-42 Score=347.53 Aligned_cols=252 Identities=17% Similarity=0.197 Sum_probs=197.6
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEee------C
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE------G 94 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~ 94 (460)
..+.+|++++.||+|+||.||+|.. .+|+.||||+++..... ..+.+.+|+.++++++||||+++++++.. +
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 3456799999999999999999995 56999999998764322 25678999999999999999999998755 6
Q ss_pred CeeEEEEEcCCCCCHHhhhhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCC---eEEccCC
Q 012608 95 DERLLVAEYMPNETLAKHLFHWE-THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGN---PRLSTFG 170 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~---~kl~DFg 170 (460)
+..++||||++|++|.+++.... ...+++..++.++.|++.||.|||+.| |+||||||+||+++.++. +||+|||
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g-IVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR-IIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT-BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC-CccCCCCHHHeEeecCCCceeEEEcccc
Confidence 67899999999999999997533 236889999999999999999999999 999999999999987665 8999999
Q ss_pred CcccCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh-hhh---------------
Q 012608 171 LMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRD--------------- 231 (460)
Q Consensus 171 ~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~-~~~--------------- 231 (460)
++...... ....||+.|+|||.+.+..++.++|||||||++|+|++|..||....... +..
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence 99876543 34578999999999998899999999999999999999999986532111 000
Q ss_pred --ccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHH
Q 012608 232 --RNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275 (460)
Q Consensus 232 --~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~i 275 (460)
...........+......+++.+.+++.+||..||.+|||+.++
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 00000001111223455688999999999999999999999773
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=335.31 Aligned_cols=244 Identities=18% Similarity=0.120 Sum_probs=186.8
Q ss_pred cchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 28 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
|.+.+.||+|+||+||.+...+|+.||||++.... .+.+.+|+.+++++ +||||+++++++..++..++||||+.
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 34457799999999987766689999999986532 45788999999987 89999999999999999999999996
Q ss_pred CCHHhhhhccCCCC-----CCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC-------------CCeEEcc
Q 012608 107 ETLAKHLFHWETHP-----MKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED-------------GNPRLST 168 (460)
Q Consensus 107 ~sL~~~~~~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~-------------~~~kl~D 168 (460)
++|.+++....... .++..++.++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC-ccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 69999997432211 123345789999999999999999 9999999999999754 4799999
Q ss_pred CCCcccCCCC--------CCccCCCcccCcccccc-------CCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhc
Q 012608 169 FGLMKNSRDG--------KSYSTNLAFTPPEYLRT-------GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDR 232 (460)
Q Consensus 169 Fg~a~~~~~~--------~~~~~t~~y~aPE~~~~-------~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~ 232 (460)
||+++..... ....||+.|+|||++.+ ..++.++|||||||++|+|+| |..||..........
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i- 250 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI- 250 (434)
T ss_dssp CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHH-
T ss_pred cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHH-
Confidence 9999876543 23468999999999965 568999999999999999999 888886543221110
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 233 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.................+++++.+++.+||+.||.+|||+.++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 000001111111223467789999999999999999999999987
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=326.31 Aligned_cols=249 Identities=15% Similarity=0.142 Sum_probs=200.1
Q ss_pred cccchhcccCCCCCCeEEEEEEc-CC-cEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCc------cceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE-NQ-RRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR------LTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~------iv~~~~~~~~~~~~ 97 (460)
..|++++.||+|+||.||++... ++ +.||+|+++... ...+.+.+|+.++++++|++ ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 57899999999999999999953 44 789999986432 22467889999999997665 89999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE-------------------
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF------------------- 158 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill------------------- 158 (460)
++||||+ +++|.+.+.......+++..++.++.||+.||.|||+++ |+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~-ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ-LTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC-cccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 577777776555567999999999999999999999999 9999999999999
Q ss_pred cCCCCeEEccCCCcccCCCC-CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc---c
Q 012608 159 DEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN---L 234 (460)
Q Consensus 159 ~~~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~---~ 234 (460)
+.++.+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|+|++|..||............ .
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 56789999999999865443 4567899999999999888999999999999999999999998764322111000 0
Q ss_pred cccc-----------------------------------cccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 235 QMLT-----------------------------------DSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 235 ~~~~-----------------------------------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...+ ............+..+.+|+.+||+.||.+|||+.++++
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 000001122345678999999999999999999999986
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=320.02 Aligned_cols=248 Identities=19% Similarity=0.244 Sum_probs=183.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.+.+|++++.||+|+||.||+|... +|+.||||++....... .+.+..+..+++.++||||+++++++..++..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 4677899999999999999999964 69999999997654322 23344555678888999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
|||+ ++.+..+... ....+++..++.++.|++.||.|||++ + |+|+||||+||+++.++.+||+|||++......
T Consensus 103 ~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp ECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred Eecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC-EEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 9999 5666555532 356799999999999999999999996 8 999999999999999999999999998765433
Q ss_pred --CCccCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhh-hhhhccccccccccccCCCCchh
Q 012608 179 --KSYSTNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALD-LIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
....+|+.|+|||.+. ...++.++|||||||++|+|++|..||...... ........... ........+
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 256 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP---PLLPGHMGF 256 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC---CCCCSSSCC
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC---CCCCccCCC
Confidence 3446899999999984 456888999999999999999999988652211 11111111100 001112346
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++++.+++.+||+.||.+|||+.++++
T Consensus 257 ~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 257 SGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 789999999999999999999999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-41 Score=331.51 Aligned_cols=243 Identities=16% Similarity=0.101 Sum_probs=188.9
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcC
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
..|++.+.||+|+||+||.....+|+.||||++.... ...+.+|+.+++++ +||||+++++++...+..++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 3578888999999999776556689999999986543 23467899999999 8999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-----CCCeEEccCCCcccCCCC-
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-----~~~~kl~DFg~a~~~~~~- 178 (460)
+ ++|.+++... ....++..+..++.||+.||.|||+++ |+||||||+|||++. ...+||+|||+++.....
T Consensus 101 ~-g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 101 A-ATLQEYVEQK-DFAHLGLEPITLLQQTTSGLAHLHSLN-IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp S-EEHHHHHHSS-SCCCCSSCHHHHHHHHHHHHHHHHHTT-CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred C-CCHHHHHHhc-CCCccchhHHHHHHHHHHHHHHHHHCc-CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 7 6999998753 334555567889999999999999999 999999999999953 235789999998765432
Q ss_pred ------CCccCCCcccCcccccc---CCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCc
Q 012608 179 ------KSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 179 ------~~~~~t~~y~aPE~~~~---~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
....||+.|+|||++.+ ..++.++|||||||++|+|+| |..||.............. ... .......
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~-~~~--~~~~~~~ 254 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA-CSL--DCLHPEK 254 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTC-CCC--TTSCTTC
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhcc-CCc--cccCccc
Confidence 34568999999999973 557889999999999999999 7777754332222111110 000 0111234
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..+..+.++|.+||+.||.+|||+.++++
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 56677999999999999999999999996
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=310.45 Aligned_cols=226 Identities=15% Similarity=0.151 Sum_probs=182.9
Q ss_pred cccchh-cccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHH-hcCCCCccceeeeEEee----CCeeE
Q 012608 26 AVENIV-SEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSV-GQLRNNRLTNLLGCCCE----GDERL 98 (460)
Q Consensus 26 ~~~~i~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~~iv~~~~~~~~----~~~~~ 98 (460)
.+|.++ +.||+|+||.||++.. .+|+.||+|+++. ...+.+|+.++ +.++||||+++++++.. .+..+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 457777 6799999999999995 5699999999853 35788899998 55599999999999876 66789
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCcccC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNS 175 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~~ 175 (460)
+||||++|++|.+++.......+++..++.++.|++.||.|||+++ |+||||||+||+++. ++.+||+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 170 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence 9999999999999998755668999999999999999999999999 999999999999997 788999999988643
Q ss_pred CCCCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC----chhH
Q 012608 176 RDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT----DDDG 251 (460)
Q Consensus 176 ~~~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 251 (460)
. +..++.++|||||||++|+|+||..||..................... ..+ ..++
T Consensus 171 ~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 230 (299)
T 3m2w_A 171 T------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY--EFPNPEWSEVS 230 (299)
T ss_dssp T------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCC--SSCHHHHTTSC
T ss_pred c------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccc--cCCchhcccCC
Confidence 2 245788999999999999999999998665433222111111111111 111 3467
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+++.+||+.||.+|||+.++++
T Consensus 231 ~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 231 EEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 89999999999999999999999997
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=320.33 Aligned_cols=238 Identities=16% Similarity=0.119 Sum_probs=182.0
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC---CHHHHHHHHHHHhcCCC-Cccc---------e------
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP---DPRQFLEEARSVGQLRN-NRLT---------N------ 86 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-~~iv---------~------ 86 (460)
.+.+.+.||+|+||+||+|. ..+|+.||||+++..... ..+.+.+|+.+++.+.| +|.. .
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 36677889999999999999 556999999998743322 36789999999999977 3211 1
Q ss_pred ------eeeEEee-----CCeeEEEEEcCCCCCHHhhhh-----ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCccccc
Q 012608 87 ------LLGCCCE-----GDERLLVAEYMPNETLAKHLF-----HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHD 150 (460)
Q Consensus 87 ------~~~~~~~-----~~~~~lv~e~~~g~sL~~~~~-----~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~D 150 (460)
+..++.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||.|||+++ |+|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-iiHrD 236 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG-LVHTY 236 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT-EECSC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCC
Confidence 1111111 12356777776 589999884 223456788899999999999999999999 99999
Q ss_pred ccCCcEEEcCCCCeEEccCCCcccCCCC-CCccCCCcccCcccc----------ccCCCCCCCceehHHHHHHHHhhCCC
Q 012608 151 LNAYRILFDEDGNPRLSTFGLMKNSRDG-KSYSTNLAFTPPEYL----------RTGRVTPESVIYSFGTLLLDLLSGKH 219 (460)
Q Consensus 151 ikp~Nill~~~~~~kl~DFg~a~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~sDi~slG~~l~el~tg~~ 219 (460)
|||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|+|+||+.
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred cccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 9999999999999999999998765543 34566 999999999 55558889999999999999999999
Q ss_pred CCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 220 IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 220 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
||.............. ....+++.+.++|.+||+.||.+|||+.++++
T Consensus 316 Pf~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 316 PNTDDAALGGSEWIFR----------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCTTGGGSCSGGGGS----------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchhhhHHHHHh----------hcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9876543222111111 11245689999999999999999999877754
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=318.41 Aligned_cols=242 Identities=13% Similarity=0.092 Sum_probs=188.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCC--------CCHHHHHHHHHHHhcCC---------CCccce
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--------PDPRQFLEEARSVGQLR---------NNRLTN 86 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------h~~iv~ 86 (460)
...+|++++.||+|+||+||+|+. +|+.||||+++.... ...+.+.+|+.+++.++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 446799999999999999999998 789999999976532 22478999999999886 666666
Q ss_pred eeeEEe-----------------e-------------CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHH
Q 012608 87 LLGCCC-----------------E-------------GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQA 136 (460)
Q Consensus 87 ~~~~~~-----------------~-------------~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~ 136 (460)
+.+++. . ++..++||||+++|++.+.+. .+.+++..++.++.||+.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHH
Confidence 666542 2 678999999999997766663 3568999999999999999
Q ss_pred HHHHH-hCCCcccccccCCcEEEcCCC--------------------CeEEccCCCcccCCCCCCccCCCcccCcccccc
Q 012608 137 LEYCT-SKGRALYHDLNAYRILFDEDG--------------------NPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT 195 (460)
Q Consensus 137 l~~lH-~~~~iiH~Dikp~Nill~~~~--------------------~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~~ 195 (460)
|.||| +++ |+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+
T Consensus 174 L~~lH~~~~-ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 174 LAVAEASLR-FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHHHC-CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHHHhCC-EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 99999 899 99999999999999887 8999999999876543 4578999999999986
Q ss_pred CCCCCCCceehHHHH-HHHHhhCCCCCCChhh-hhhhhccccc-cccccccCCCCchhHHHHHHHHHHHcccCCCCCCCh
Q 012608 196 GRVTPESVIYSFGTL-LLDLLSGKHIPPSHAL-DLIRDRNLQM-LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 272 (460)
Q Consensus 196 ~~~~~~sDi~slG~~-l~el~tg~~p~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~ 272 (460)
.. +.++||||+|++ .+++++|..||..... .......... ..........+..+++++.+||.+||+.| |+
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa 325 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SA 325 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SH
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CH
Confidence 66 889999998777 7778889888754211 0011111100 01111111223467899999999999976 99
Q ss_pred hHHH-H
Q 012608 273 KSLV-T 277 (460)
Q Consensus 273 ~~il-~ 277 (460)
.+++ +
T Consensus 326 ~e~l~~ 331 (336)
T 2vuw_A 326 TDLLCQ 331 (336)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 9998 5
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-33 Score=285.72 Aligned_cols=179 Identities=13% Similarity=0.096 Sum_probs=129.7
Q ss_pred ccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCC----------CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEE
Q 012608 33 EHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWP----------DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 33 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 100 (460)
..+.|++|.+..++ ...|+.+++|++...... ..++|.+|+++|+++ +|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45677777777665 456899999999754321 135699999999999 799999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|||++|++|.+++.. .++++.. +|+.||+.||+|+|++| ||||||||+|||++++|.+||+|||+++.....
T Consensus 321 MEyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~G-IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQG-FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTT-CEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCC-ceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 999999999999973 5667654 47899999999999999 999999999999999999999999999876543
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCC
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 218 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~ 218 (460)
.+..||+.|||||++.+ .+..++|+||+|++++++.++.
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 24568999999999974 5677899999999988876654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.9e-29 Score=250.17 Aligned_cols=177 Identities=12% Similarity=0.106 Sum_probs=143.8
Q ss_pred hcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCC--------HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 31 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPD--------PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.+.||+|+||.||++.. .++.+++|+........ .+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 45789999999999954 57889999875543322 2358999999999999999976666667788899999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|++|++|.+++.. +..++.|++.||.|||+++ |+||||||+|||++. .+||+|||+++.....
T Consensus 420 ~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g-IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~ 486 (540)
T 3en9_A 420 YINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND-VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKA 486 (540)
T ss_dssp CCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT-EECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHH
T ss_pred CCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc-CccCCCCHHHEEECC--eEEEEECccCEECCCccccc
Confidence 9999999999852 5688999999999999999 999999999999998 9999999999887653
Q ss_pred -------CCccCCCcccCcccccc--CCCCCCCceehHHHHHHHHhhCCCCC
Q 012608 179 -------KSYSTNLAFTPPEYLRT--GRVTPESVIYSFGTLLLDLLSGKHIP 221 (460)
Q Consensus 179 -------~~~~~t~~y~aPE~~~~--~~~~~~sDi~slG~~l~el~tg~~p~ 221 (460)
....||+.|||||++.. ..|+..+|+||..+-..+-+.++.++
T Consensus 487 ~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 487 VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 24578999999999976 45788899999999888887766443
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.8e-26 Score=211.41 Aligned_cols=154 Identities=16% Similarity=0.096 Sum_probs=121.6
Q ss_pred HHHHHhcCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC------------------CHHHHHHHHHHHhc
Q 012608 17 QLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP------------------DPRQFLEEARSVGQ 78 (460)
Q Consensus 17 ~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~ 78 (460)
.+....+.-..|.+.+.||+|+||.||+|...+|+.||||+++..... ....+.+|+.++++
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~ 160 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQK 160 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHh
Confidence 344444455556666999999999999999977999999999653321 13468999999999
Q ss_pred CCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE
Q 012608 79 LRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158 (460)
Q Consensus 79 l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill 158 (460)
++ | +++.+++.. +..++||||++|++|.+ +. . .....++.|++.||.|||+.| |+||||||+|||+
T Consensus 161 l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~g-iiHrDlkp~NILl 226 (282)
T 1zar_A 161 LQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLV 226 (282)
T ss_dssp TT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEE
T ss_pred cc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHCC-CEeCCCCHHHEEE
Confidence 99 4 566665543 55699999999999988 42 1 224578999999999999999 9999999999999
Q ss_pred cCCCCeEEccCCCcccCCCCCCccCCCcccCccccc
Q 012608 159 DEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLR 194 (460)
Q Consensus 159 ~~~~~~kl~DFg~a~~~~~~~~~~~t~~y~aPE~~~ 194 (460)
+ ++.+||+|||+++. +..++|||.+.
T Consensus 227 ~-~~~vkl~DFG~a~~---------~~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE---------VGEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEE---------TTSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeE---------CCCCCHHHHHH
Confidence 9 99999999999863 34468888874
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=156.60 Aligned_cols=109 Identities=20% Similarity=0.259 Sum_probs=105.6
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
+.+..++++|+.+++.|+|++|++.|++||+++|. ++.+|.++|.+|..+|++++|+.+|++|++++|+++.+|+++|.
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~ 89 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAA 89 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 67889999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
++..+|++++|+++|++|++++|++..++.
T Consensus 90 ~~~~~~~~~~A~~~~~~al~l~P~~~~a~~ 119 (126)
T 4gco_A 90 CLVAMREWSKAQRAYEDALQVDPSNEEARE 119 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCcCCHHHHH
Confidence 999999999999999999999999987753
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.1e-22 Score=181.54 Aligned_cols=149 Identities=13% Similarity=0.075 Sum_probs=115.0
Q ss_pred HHHHHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcE--EEEEEecCCCCCC------------------------HH
Q 012608 15 LEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRR--IAVKRFNRMAWPD------------------------PR 67 (460)
Q Consensus 15 ~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~~ 67 (460)
...+....+.-..|++.+.||+|+||.||+|.. .+|+. ||||+++...... ..
T Consensus 36 ~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 1zth_A 36 LKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFI 115 (258)
T ss_dssp HHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHH
T ss_pred HHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHH
Confidence 344455555555688899999999999999996 78999 9999976542110 12
Q ss_pred HHHHHHHHHhcCCCCcc--ceeeeEEeeCCeeEEEEEcCCC-C----CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHH
Q 012608 68 QFLEEARSVGQLRNNRL--TNLLGCCCEGDERLLVAEYMPN-E----TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC 140 (460)
Q Consensus 68 ~~~~E~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~g-~----sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 140 (460)
.+.+|+.++.++.|+++ +.+++. +..++||||+.+ | +|.+.... .++..+..++.|++.+|.||
T Consensus 116 ~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~l 186 (258)
T 1zth_A 116 WTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRL 186 (258)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHH
Confidence 68899999999988764 444442 356899999942 3 77766531 23556788999999999999
Q ss_pred H-hCCCcccccccCCcEEEcCCCCeEEccCCCcccC
Q 012608 141 T-SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNS 175 (460)
Q Consensus 141 H-~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~ 175 (460)
| +.| |+||||||+|||++. .++|+|||++...
T Consensus 187 H~~~g-ivHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 187 YQEAE-LVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHTSC-EECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHCC-EEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9 898 999999999999998 8999999998754
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.3e-20 Score=153.33 Aligned_cols=111 Identities=13% Similarity=0.044 Sum_probs=104.1
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----------cHHHHhhHHHHHHhcCChHHHHHHHHHhhhh-
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----------SPTVYARRSLCYLMSDMPQDALNDAMQAQII- 415 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l- 415 (460)
...+..++++|+.+++.|+|++|++.|++||+++|++ +..+|+|+|.++..+|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 4678899999999999999999999999999999992 2339999999999999999999999999999
Q ss_pred ------CCcchHHH----HHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 416 ------SPIWHIAS----YLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 416 ------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+|+++++| +++|.++..+|++++|+++|++|++++|++....+
T Consensus 88 n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 88 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred hccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999 99999999999999999999999999999987654
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6.9e-19 Score=146.99 Aligned_cols=107 Identities=6% Similarity=-0.092 Sum_probs=103.3
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
...++..++.+|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|+++
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHT 110 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 3478899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
|.+|..+|++++|+++|++|++++|+..
T Consensus 111 g~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 111 GQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999998764
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.7e-18 Score=140.46 Aligned_cols=105 Identities=15% Similarity=0.126 Sum_probs=98.9
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc-------h
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------H 420 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~-------~ 420 (460)
...+.++.++|+.+++.|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++ +
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 356888999999999999999999999999999999 89999999999999999999999999999999976 4
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 421 IASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 421 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
.+|+++|.++..+|++++|+++|++|++++|+.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 689999999999999999999999999988754
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.76 E-value=2e-19 Score=171.13 Aligned_cols=148 Identities=13% Similarity=0.075 Sum_probs=107.1
Q ss_pred HHHHHhcCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC--------------CHHH--------HHHHHH
Q 012608 17 QLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--------------DPRQ--------FLEEAR 74 (460)
Q Consensus 17 ~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~--------~~~E~~ 74 (460)
.|....+.=..|++.++||.|++|.||+|...+|+.||||+++..... .... ..+|..
T Consensus 86 AL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~ 165 (397)
T 4gyi_A 86 ALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFA 165 (397)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 345555555569999999999999999999888999999998643110 0111 235667
Q ss_pred HHhcCCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCC
Q 012608 75 SVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154 (460)
Q Consensus 75 ~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~ 154 (460)
.|.++.+.++....-+... ..++||||++|++|.++.. . .....++.|++.+|.+||+.| ||||||||.
T Consensus 166 nL~rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~g-IVHrDLKp~ 234 (397)
T 4gyi_A 166 FMKALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKHG-LIHGDFNEF 234 (397)
T ss_dssp HHHHHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHTT-EECSCCSTT
T ss_pred HHHHHHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHCC-CcCCCCCHH
Confidence 7777755444322212112 2379999999998876542 1 124567899999999999999 999999999
Q ss_pred cEEEcCCCC----------eEEccCCCcccC
Q 012608 155 RILFDEDGN----------PRLSTFGLMKNS 175 (460)
Q Consensus 155 Nill~~~~~----------~kl~DFg~a~~~ 175 (460)
|||+++++. +.|+||+.+...
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999987763 889999976543
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.6e-18 Score=136.58 Aligned_cols=108 Identities=19% Similarity=0.187 Sum_probs=102.5
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
..+..++.+|..+++.|+|++|+..|+++++++|+ ++.+|.++|.+|..+|++++|+.+|+++++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 35788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhh------hhccccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLE------AKKNSTA 457 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~------~~~~~a~ 457 (460)
++..+|++++|+++|+++++++ |.+..++
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~ 115 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKDAEVNNGSSAREID 115 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHH
Confidence 9999999999999999999999 6665443
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.4e-18 Score=144.21 Aligned_cols=108 Identities=24% Similarity=0.234 Sum_probs=102.4
Q ss_pred hhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc------------------CCCccHHHHhhHHHHHHhcCChHHHHH
Q 012608 346 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------------------GTMVSPTVYARRSLCYLMSDMPQDALN 407 (460)
Q Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------------------~p~~~~~~~~~~~~~~~~~~~~~~A~~ 407 (460)
+.++.+..+..+|+.+++.|+|++|+..|++|+++ +|. ...+|+++|.||..+|++++|+.
T Consensus 6 e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~ 84 (162)
T 3rkv_A 6 DKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEE 84 (162)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHH
Confidence 34577899999999999999999999999999999 777 77899999999999999999999
Q ss_pred HHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 408 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 408 ~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
+|++|++++|+++.+|+++|.++..+|++++|+.+|++|++++|++.
T Consensus 85 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 85 TSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 99999999999999999999999999999999999999999999987
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=8.2e-18 Score=140.69 Aligned_cols=110 Identities=11% Similarity=0.083 Sum_probs=103.6
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
..+.+..++.+|..+++.|+|++|++.|+++++++|+ ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++
T Consensus 27 ~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 105 (150)
T 4ga2_A 27 PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKI 105 (150)
T ss_dssp HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3467888999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHH-HHHhhhhhhhccccc
Q 012608 427 AAALSAMGMENEAQVA-LKEGTTLEAKKNSTA 457 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~-~~~al~l~~~~~~a~ 457 (460)
|.++..+|++++|.+. +++|++++|++..++
T Consensus 106 a~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 106 AELLCKNDVTDGRAKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp HHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHhCcCCHHHH
Confidence 9999999999988776 599999999987664
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=139.81 Aligned_cols=109 Identities=26% Similarity=0.296 Sum_probs=105.1
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..++..++.+|..++..|+|++|++.|+++++++|+ +..+|+++|.+|..+|++++|+.+|+++++++|+++.+|+++|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 367889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.++..+|++++|+++|+++++++|++..+|
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 999999999999999999999999998754
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-17 Score=136.26 Aligned_cols=108 Identities=11% Similarity=0.017 Sum_probs=103.3
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..++..++.+|..++..|+|++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..|++|++++|+++.+|+++|
T Consensus 18 p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 18 SDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 467888999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
.++..+|++++|+++|++|++++|++...
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCcCCCcc
Confidence 99999999999999999999999986543
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.71 E-value=7.3e-17 Score=133.49 Aligned_cols=108 Identities=10% Similarity=0.061 Sum_probs=103.3
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..+...++..|..+++.|+|++|+..|+++++.+|+ ++.+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|
T Consensus 15 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 93 (142)
T 2xcb_A 15 EDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAA 93 (142)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 467788999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
.++..+|++++|+++|+++++++|++...
T Consensus 94 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 122 (142)
T 2xcb_A 94 ECHLQLGDLDGAESGFYSARALAAAQPAH 122 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCcch
Confidence 99999999999999999999999987654
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-17 Score=130.16 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=93.5
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 431 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 431 (460)
..++.+|..+++.|++++|+..|+++++.+|+ +..+|+++|.++...|++++|+..|++|++++|+++.+|+++|.++.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35688999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHhhhhhhhccc
Q 012608 432 AMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 432 ~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
.+|++++|+..|+++++++|++..
T Consensus 97 ~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 97 NEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHC-------
T ss_pred HcCCHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999999998754
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-16 Score=139.54 Aligned_cols=107 Identities=16% Similarity=0.019 Sum_probs=99.4
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhh----------------HHHHHHhcCChHHHHHHHHHhh
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYAR----------------RSLCYLMSDMPQDALNDAMQAQ 413 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~a~ 413 (460)
.+..+..+|..+++.|+|++|+..|+++++++|+ ++.+|+. +|.+|...|++++|+..|++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4667889999999999999999999999999999 8888888 9999999999999999999999
Q ss_pred hhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 414 IISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 414 ~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+++|+++.+|+++|.++..+|++++|+++|+++++++|++..++
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~ 125 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAAN 125 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999999999999999999988765
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=124.53 Aligned_cols=103 Identities=23% Similarity=0.377 Sum_probs=100.1
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..++..|..++..|+|++|+..|+++++.+|+ +..+++++|.++..+|++++|+..++++++++|+++.+|+++|.+
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 86 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 86 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 4678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
+..+|++++|+..|+++++++|+.
T Consensus 87 ~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 87 QLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhHHHHHHHHHHHHHHChhH
Confidence 999999999999999999999983
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=6.1e-16 Score=161.00 Aligned_cols=109 Identities=17% Similarity=0.090 Sum_probs=100.4
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
..+.++.++|.++.+.|++++|++.|++||+++|+ +..+|+++|.+|..+|++++|++.|++|++++|+++.+|+++|.
T Consensus 41 ~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~ 119 (723)
T 4gyw_A 41 EFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLAS 119 (723)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 56888999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+|..+|++++|+++|++|++++|++..++.
T Consensus 120 ~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~ 149 (723)
T 4gyw_A 120 IHKDSGNIPEAIASYRTALKLKPDFPDAYC 149 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHh
Confidence 999999999999999999999999877653
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=1e-16 Score=132.10 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=88.4
Q ss_pred HhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCCh----------HHHHHHHHHhhhhCCcchHHHHHHHHHHH
Q 012608 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMP----------QDALNDAMQAQIISPIWHIASYLQAAALS 431 (460)
Q Consensus 362 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 431 (460)
-+.+.|++|+..|+++++++|+ ++.+|+++|.++..++++ ++|+..|++||+++|+++++|+++|.+|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3567899999999999999999 999999999999999876 49999999999999999999999999999
Q ss_pred hcC-----------ChHHHHHHHHHhhhhhhhccccc
Q 012608 432 AMG-----------MENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 432 ~~~-----------~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.+| ++++|+++|++|+++||++..++
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~ 128 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYL 128 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 885 89999999999999999987654
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.5e-15 Score=133.00 Aligned_cols=117 Identities=18% Similarity=0.193 Sum_probs=107.8
Q ss_pred chhhhhhhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccH----------------HHHhhHHHHHHhcCChH
Q 012608 340 SFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----------------TVYARRSLCYLMSDMPQ 403 (460)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----------------~~~~~~~~~~~~~~~~~ 403 (460)
+..........+..+...|..++..|+|++|+..|++++++.|. ++ .++.++|.+|..+|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 105 (198)
T 2fbn_A 27 YDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYP 105 (198)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 33334456678899999999999999999999999999999998 55 89999999999999999
Q ss_pred HHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 404 DALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 404 ~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+|+.+|+++++++|+++.+++++|.++..+|++++|+++|++|++++|++..++
T Consensus 106 ~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 159 (198)
T 2fbn_A 106 KAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 159 (198)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHH
Confidence 999999999999999999999999999999999999999999999999987654
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-16 Score=132.99 Aligned_cols=101 Identities=8% Similarity=-0.077 Sum_probs=93.4
Q ss_pred HhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCC
Q 012608 356 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGM 435 (460)
Q Consensus 356 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~ 435 (460)
.+|..+.++|++++|++.|.+++..+|+ .+..++++|.+|...|++++|+..|+++++++|+++.+|+++|.++..+|+
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~ 80 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEEN 80 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCc
Confidence 3688888999999999999999999999 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhhhccccc
Q 012608 436 ENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 436 ~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+++|+.+|++|++++|++..++
T Consensus 81 ~~~A~~~~~~al~~~p~~~~~~ 102 (150)
T 4ga2_A 81 TDKAVECYRRSVELNPTQKDLV 102 (150)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999988765
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.9e-15 Score=143.97 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=105.6
Q ss_pred hhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc---------------HHHHhhHHHHHHhcCChHHHHHHHH
Q 012608 346 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDAM 410 (460)
Q Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~ 410 (460)
.....+..++.+|..+++.|+|++|+..|++|++++|+ + ..+|+++|.||.++|++++|+.+|+
T Consensus 142 ~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35578899999999999999999999999999999999 5 6899999999999999999999999
Q ss_pred HhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 411 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 411 ~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+|++++|+++.+|+++|.+|..+|++++|+++|++|++++|++..++
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999999999999999999999999999987665
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.1e-15 Score=118.22 Aligned_cols=107 Identities=26% Similarity=0.368 Sum_probs=102.7
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
.+..++..|..++..|+|++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 5678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|++.|+++++++|++..++
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 109 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNPQLK 109 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCHHHH
Confidence 9999999999999999999999887654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2e-15 Score=149.99 Aligned_cols=112 Identities=15% Similarity=0.177 Sum_probs=102.6
Q ss_pred hhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc---------------HHHHhhHHHHHHhcCChHHHHHHHH
Q 012608 346 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---------------PTVYARRSLCYLMSDMPQDALNDAM 410 (460)
Q Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~ 410 (460)
.....+..++++|..+++.|+|++|+..|++|++++|. + ..+|+++|.||.++|+|++|+.+|+
T Consensus 263 ~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 341 (457)
T 1kt0_A 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 341 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 34577899999999999999999999999999999999 5 6899999999999999999999999
Q ss_pred HhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 411 QAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 411 ~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+|++++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..++.
T Consensus 342 ~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~ 389 (457)
T 1kt0_A 342 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARL 389 (457)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHH
T ss_pred HHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999999999999999999999999999987653
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.7e-15 Score=120.71 Aligned_cols=108 Identities=26% Similarity=0.317 Sum_probs=103.0
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
....+++.+|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++++|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 92 (133)
T 2lni_A 14 DLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAA 92 (133)
T ss_dssp CHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 35778899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++..+|++++|++.|+++++++|.+..++
T Consensus 93 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 121 (133)
T 2lni_A 93 ALEAMKDYTKAMDVYQKALDLDSSCKEAA 121 (133)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCGGGTHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCchHHH
Confidence 99999999999999999999999887654
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=145.80 Aligned_cols=109 Identities=9% Similarity=-0.021 Sum_probs=102.3
Q ss_pred HHHHHhHHhhhHHHhhCC-HHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKD-LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
.++.+|..+|.++...|+ |++|+..|++||+++|+ +..+|+++|.++..+|++++|+.+|++||+++|+++.+|+++|
T Consensus 129 ~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg 207 (382)
T 2h6f_A 129 ANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQ 207 (382)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHH
Confidence 568889999999999996 99999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
.++..+|++++|+++|++|++++|++..||.
T Consensus 208 ~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~ 238 (382)
T 2h6f_A 208 WVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 238 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999999988774
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=157.16 Aligned_cols=108 Identities=13% Similarity=0.073 Sum_probs=86.2
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++.++.++|.++.++|+|++|++.|++||+++|+ +..+|+++|.+|.++|++++|+..|++|++++|+++.+|+++|.
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~ 85 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 46777788888888888888888888888888888 77778888888888888888888888888888888888888888
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++..+|++++|+++|++|++++|++..++
T Consensus 86 ~l~~~g~~~~A~~~~~kAl~l~P~~~~a~ 114 (723)
T 4gyw_A 86 TLKEMQDVQGALQCYTRAIQINPAFADAH 114 (723)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 88888888888888888888888776654
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-15 Score=135.03 Aligned_cols=108 Identities=13% Similarity=0.144 Sum_probs=103.1
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..+..+|..+++.|++++|+..|+++++++|+ ++.+++++|.++...|++++|+..|+++++++|+++.+|+++|.
T Consensus 3 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~ 81 (217)
T 2pl2_A 3 TAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSE 81 (217)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 34668899999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhc-----------CChHHHHHHHHHhhhhhhhccccc
Q 012608 429 ALSAM-----------GMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 429 ~~~~~-----------~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++..+ |++++|+..|++|++++|++..++
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 121 (217)
T 2pl2_A 82 AYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLH 121 (217)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHH
Confidence 99999 999999999999999999987765
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-15 Score=145.48 Aligned_cols=110 Identities=10% Similarity=-0.075 Sum_probs=106.1
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCC-hHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
...+..+..+|.++...|+|++|++.|+++|+++|+ +..+|+++|.++..+|+ +++|+.+|++|++++|+++.+|+++
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~ 172 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHR 172 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 467889999999999999999999999999999999 89999999999999997 9999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
|.++..+|++++|+.+|++|++++|++..+|.
T Consensus 173 g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~ 204 (382)
T 2h6f_A 173 RVLVEWLRDPSQELEFIADILNQDAKNYHAWQ 204 (382)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCccCHHHHH
Confidence 99999999999999999999999999988874
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.59 E-value=8.8e-15 Score=126.23 Aligned_cols=107 Identities=20% Similarity=0.165 Sum_probs=101.7
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
.+..+...|..+...++++.|++.+.++++++|+ +..++..+|.+|..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~ 150 (184)
T 3vtx_A 72 SAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLA 150 (184)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHH
Confidence 4567888999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
|..+|++++|+++|++|++++|++...+
T Consensus 151 ~~~~g~~~~A~~~~~~al~~~p~~a~~~ 178 (184)
T 3vtx_A 151 YEGKGLRDEAVKYFKKALEKEEKKAKYE 178 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTHHHHHHC
T ss_pred HHHCCCHHHHHHHHHHHHhCCccCHHHH
Confidence 9999999999999999999999986543
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.7e-15 Score=142.94 Aligned_cols=113 Identities=12% Similarity=0.143 Sum_probs=98.4
Q ss_pred hhhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccH-----------------HHHhhHHHHHHhcCChHHHHH
Q 012608 345 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP-----------------TVYARRSLCYLMSDMPQDALN 407 (460)
Q Consensus 345 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~ 407 (460)
......+..++.+|..+++.|+|++|+..|++|++++|+ +. .+|+++|.||.++|+|++|+.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~ 251 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIG 251 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 456678999999999999999999999999999999999 55 389999999999999999999
Q ss_pred HHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 408 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 408 ~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+|++|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++..++.
T Consensus 252 ~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~ 302 (338)
T 2if4_A 252 HCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRR 302 (338)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999987764
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=8.1e-15 Score=121.19 Aligned_cols=107 Identities=22% Similarity=0.238 Sum_probs=101.9
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc---HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
++..++..|..++..|+|++|+..|+++++.+|+ + ..++.++|.+|...|++++|+..++++++++|+++.+|+++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 4667889999999999999999999999999999 6 88999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
|.++..+|++++|+..|+++++++|++..++
T Consensus 106 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 136 (148)
T 2dba_A 106 SQALEKLGRLDQAVLDLQRCVSLEPKNKVFQ 136 (148)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCcHHHH
Confidence 9999999999999999999999999987665
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=8.1e-15 Score=135.94 Aligned_cols=106 Identities=23% Similarity=0.362 Sum_probs=101.4
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..++.+|..++..|+|++|+..|++|++.+|+ +..+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3568899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+..+|++++|+..|++|++++|++...
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~~~~ 108 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQRLN 108 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchhh
Confidence 999999999999999999999987543
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.59 E-value=7.7e-15 Score=118.57 Aligned_cols=105 Identities=13% Similarity=0.011 Sum_probs=98.7
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccH---HHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc---hHHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---HIASYL 425 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---~~a~~~ 425 (460)
..++.+|..++..|+|++|+..|+++++.+|+ +. .+++.+|.++...|++++|+..|+++++++|++ +.++++
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 46788999999999999999999999999999 66 789999999999999999999999999999999 899999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+|.++..+|++++|+..|+++++.+|++..+.
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 113 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGSDAAR 113 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCChHHH
Confidence 99999999999999999999999999876543
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.59 E-value=1.3e-14 Score=122.52 Aligned_cols=110 Identities=24% Similarity=0.307 Sum_probs=104.3
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
....+..+...|..++..|+|++|+..|.++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+|+++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 3467889999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
|.++..+|++++|+..|+++++++|++..++
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 118 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDKDAK 118 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999887654
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5.7e-15 Score=142.33 Aligned_cols=112 Identities=18% Similarity=0.227 Sum_probs=105.3
Q ss_pred hhhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhh----------------cCCCccHHHHhhHHHHHHhcCChHHHHHH
Q 012608 345 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFID----------------AGTMVSPTVYARRSLCYLMSDMPQDALND 408 (460)
Q Consensus 345 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----------------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~ 408 (460)
......+..+..+|..+++.|+|++|+..|++|++ ++|. ...+|+++|.+|.++|++++|+.+
T Consensus 217 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 217 DKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHHH
Confidence 34556788899999999999999999999999998 7788 889999999999999999999999
Q ss_pred HHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 409 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 409 ~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
|++|++++|+++.+|+++|.+|..+|++++|+++|++|++++|++..++
T Consensus 296 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~ 344 (370)
T 1ihg_A 296 CLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 344 (370)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999999999999999999999999987654
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.5e-14 Score=115.15 Aligned_cols=109 Identities=19% Similarity=0.250 Sum_probs=104.0
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..++..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 467889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.++..+|++++|+..|+++++++|++..++
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 117 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDNETYK 117 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccchHHH
Confidence 999999999999999999999999876654
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=113.15 Aligned_cols=103 Identities=12% Similarity=0.072 Sum_probs=98.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCc--chHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI--WHIASYLQAA 428 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~--~~~a~~~~g~ 428 (460)
+..+..+|..++..|+|++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+ +..+++++|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 567889999999999999999999999999999 8899999999999999999999999999999999 9999999999
Q ss_pred HHHhc-CChHHHHHHHHHhhhhhhhcc
Q 012608 429 ALSAM-GMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 429 ~~~~~-~~~~~A~~~~~~al~l~~~~~ 454 (460)
++..+ |++++|+++|+++++.+|...
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 85 ALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999998754
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.6e-14 Score=125.35 Aligned_cols=97 Identities=8% Similarity=-0.030 Sum_probs=90.5
Q ss_pred hhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhc---
Q 012608 357 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAM--- 433 (460)
Q Consensus 357 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~--- 433 (460)
+|.++.+.|+|++|+..|+++++++|+ +..+++++|.+|...|++++|+..|+++++++|+++.+|+++|.+|+.+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999 8999999999999999999999999999999999999999988876433
Q ss_pred --------------------------------CChHHHHHHHHHhhhhhhhcc
Q 012608 434 --------------------------------GMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 434 --------------------------------~~~~~A~~~~~~al~l~~~~~ 454 (460)
|+|++|+.+|++|++++|+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~ 191 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE 191 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH
Confidence 468999999999999999753
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.4e-14 Score=128.80 Aligned_cols=107 Identities=13% Similarity=-0.004 Sum_probs=92.9
Q ss_pred HHHHHhHHhhhHHHhh-----------CCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCC
Q 012608 349 QETLNSKKKGDVAFRQ-----------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP 417 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p 417 (460)
.++..+..+|..+... |++++|+..|+++++++|+ ++.++.++|.++..+|++++|+..|++|++++
T Consensus 71 ~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~- 148 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE- 148 (217)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-
Confidence 4567888888888888 8899999999999888888 78888888888888899988999999998888
Q ss_pred cchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 418 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 418 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+++.+++++|.++..+|++++|+..|+++++++|++..++
T Consensus 149 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~ 188 (217)
T 2pl2_A 149 DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLR 188 (217)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 8888888899999889999999999999998888876654
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=128.26 Aligned_cols=104 Identities=17% Similarity=0.102 Sum_probs=99.8
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCC-CccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
++..++.+|..++..|+|++|++.|+++++++| . +..+++++|.++..+|++++|+..|+++++++|+++.+|+++|.
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 357899999999999999999999999999998 6 77888889999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
++..+|++++|++.|+++++++|++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999999976
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.4e-15 Score=118.27 Aligned_cols=93 Identities=12% Similarity=0.009 Sum_probs=84.3
Q ss_pred hhCCHHHHHHHHHHHhhc---CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHH
Q 012608 363 RQKDLKDAIECYTQFIDA---GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 439 (460)
Q Consensus 363 ~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A 439 (460)
..|+|++|+..|++++++ +|+ +..++.++|.+|..+|++++|+..|+++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 588 8899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhcccc
Q 012608 440 QVALKEGTTLEAKKNST 456 (460)
Q Consensus 440 ~~~~~~al~l~~~~~~a 456 (460)
++.|+++++++|++...
T Consensus 81 ~~~~~~al~~~p~~~~~ 97 (117)
T 3k9i_A 81 VELLLKIIAETSDDETI 97 (117)
T ss_dssp HHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHhCCCcHHH
Confidence 99999999999987643
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.53 E-value=4.4e-14 Score=121.77 Aligned_cols=108 Identities=19% Similarity=0.179 Sum_probs=82.5
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..+..+|.++.+.|++++|+..+.+++..+|+ ...++...|.++...++++.|+..+.++++++|++..+++.+|.
T Consensus 37 ~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~ 115 (184)
T 3vtx_A 37 NNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGL 115 (184)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 45566667777777777777777777777777776 66666777777777777777777777777888888888888888
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++..+|++++|+++|+++++++|.+..++
T Consensus 116 ~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 144 (184)
T 3vtx_A 116 VYDSMGEHDKAIEAYEKTISIKPGFIRAY 144 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHhCCchhHHHHHHHHHHhcchhhhHH
Confidence 88888888888888888888888877655
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.52 E-value=7e-14 Score=112.55 Aligned_cols=103 Identities=13% Similarity=0.083 Sum_probs=98.4
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc-------hH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HI 421 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~-------~~ 421 (460)
+.+..+...|..++..|+|++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 35778999999999999999999999999999999 89999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 422 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
+++++|.++..+|++++|++.|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999884
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.5e-14 Score=125.75 Aligned_cols=108 Identities=18% Similarity=0.157 Sum_probs=101.6
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcch-------H
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 421 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~-------~ 421 (460)
.+...++.+|..++..|+|++|+..|+++++.+|+ +..++.++|.+|..+|++++|+..++++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 34567888999999999999999999999999999 899999999999999999999999999999999998 7
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhhhhhh--ccccc
Q 012608 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAK--KNSTA 457 (460)
Q Consensus 422 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~--~~~a~ 457 (460)
+|+++|.++..+|++++|++.|++|++++|+ +..++
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 7999999999999999999999999999999 66554
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=4.5e-14 Score=129.56 Aligned_cols=138 Identities=12% Similarity=-0.002 Sum_probs=110.4
Q ss_pred ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.|.+...++.|+.+.||++... |+.+++|+...........+.+|+.+++.+ .+..++++++++...+..|+|||+++
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 4567777788888999999853 688999998753323345689999999999 47788999999998889999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------------------
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS------------------------------------------- 142 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~------------------------------------------- 142 (460)
|.+|.+.+. +......++.++..+|..||+
T Consensus 94 G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 94 GVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp SEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred CeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 999987642 112234678899999999998
Q ss_pred ----------------CCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 143 ----------------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 143 ----------------~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
.+ ++|+|++|.|||+++++.+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~-l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEE-EECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCce-EECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 33 8899999999999876556799998764
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.51 E-value=2e-14 Score=143.41 Aligned_cols=109 Identities=24% Similarity=0.310 Sum_probs=104.5
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
...+..+..+|..+++.|+|++|++.|++|++++|+ +..+|+++|.+|.++|++++|+.+|++|++++|+++.+|+++|
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 81 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 81 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356788999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.+|..+|++++|+++|++|++++|++..++
T Consensus 82 ~~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 82 ASNMALGKFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCTTHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999987665
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.7e-13 Score=109.22 Aligned_cols=107 Identities=17% Similarity=0.167 Sum_probs=101.6
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
.+..+...|..+...|++++|++.|.++++.+|+ +..++..+|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 86 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 3677899999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|+..|+++++++|++..++
T Consensus 87 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 114 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALELDPNNAEAK 114 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCcHHHH
Confidence 9999999999999999999999876554
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.9e-13 Score=120.60 Aligned_cols=105 Identities=16% Similarity=0.113 Sum_probs=99.3
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcch---------
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--------- 420 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~--------- 420 (460)
++..+..+|..++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|++++++.|++.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 114 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 114 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcc
Confidence 4678999999999999999999999999999999 899999999999999999999999999999888766
Q ss_pred -------HHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccc
Q 012608 421 -------IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 421 -------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
.+++++|.++..+|++++|+++|+++++++|+...
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 115 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred ccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 99999999999999999999999999999997643
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-13 Score=117.81 Aligned_cols=107 Identities=14% Similarity=0.072 Sum_probs=101.1
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHH-HHhcCCh--HHHHHHHHHhhhhCCcchHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMP--QDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
.++..+..+|..++..|+|++|+..|+++++++|+ +..++.++|.+ +...|++ ++|+..++++++++|+++.++++
T Consensus 42 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 120 (177)
T 2e2e_A 42 QNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALML 120 (177)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHH
Confidence 34678999999999999999999999999999999 89999999999 8899999 99999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+|.++..+|++++|+..|+++++++|.+...
T Consensus 121 la~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 121 LASDAFMQANYAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCCTTSCH
T ss_pred HHHHHHHcccHHHHHHHHHHHHhhCCCCccH
Confidence 9999999999999999999999999987543
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-14 Score=113.29 Aligned_cols=96 Identities=21% Similarity=0.287 Sum_probs=91.1
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc------hHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------HIAS 423 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------~~a~ 423 (460)
++..+..+|..++..|+|++|++.|+++++++|+ ++.+++++|.++..+|++++|+..|+++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 5678999999999999999999999999999999 89999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHh
Q 012608 424 YLQAAALSAMGMENEAQVALKEG 446 (460)
Q Consensus 424 ~~~g~~~~~~~~~~~A~~~~~~a 446 (460)
+++|.++..+|++++|+..|++.
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHHhHhhhHhHHHHh
Confidence 99999999999999998877654
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.48 E-value=1.6e-14 Score=120.39 Aligned_cols=88 Identities=7% Similarity=-0.246 Sum_probs=83.0
Q ss_pred HHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhh
Q 012608 370 AIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 449 (460)
Q Consensus 370 A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 449 (460)
+-..|+++++++|+ +..+++++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|+|++|+++|++|+++
T Consensus 21 ~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 21 SGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp TSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 34567889999999 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccC
Q 012608 450 EAKKNSTAG 458 (460)
Q Consensus 450 ~~~~~~a~~ 458 (460)
+|++..++.
T Consensus 100 ~P~~~~~~~ 108 (151)
T 3gyz_A 100 GKNDYTPVF 108 (151)
T ss_dssp SSSCCHHHH
T ss_pred CCCCcHHHH
Confidence 999987763
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.5e-13 Score=143.34 Aligned_cols=107 Identities=12% Similarity=-0.078 Sum_probs=103.3
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..++.+|.+++..|+|++|++.|++|++++|+ +..+++++|.+|..+|++++ +..|++|++++|+++.+|+++|.
T Consensus 465 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~ 542 (681)
T 2pzi_A 465 WRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLAR 542 (681)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHH
Confidence 46788999999999999999999999999999999 89999999999999999999 99999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++..+|++++|+++|++|++++|++..|+
T Consensus 543 ~~~~~g~~~~A~~~~~~al~l~P~~~~a~ 571 (681)
T 2pzi_A 543 ARSAEGDRVGAVRTLDEVPPTSRHFTTAR 571 (681)
T ss_dssp HHHHTTCHHHHHHHHHTSCTTSTTHHHHH
T ss_pred HHHHcCCHHHHHHHHHhhcccCcccHHHH
Confidence 99999999999999999999999988775
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.43 E-value=9.1e-13 Score=119.34 Aligned_cols=109 Identities=18% Similarity=0.186 Sum_probs=103.1
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
...+..+..+|..++..|+|++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+|+.+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 214 (258)
T 3uq3_A 136 PEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKA 214 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 357788999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhh------hhccccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLE------AKKNSTA 457 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~------~~~~~a~ 457 (460)
.++..+|++++|+..|+++++++ |++..++
T Consensus 215 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~ 250 (258)
T 3uq3_A 215 TAQIAVKEYASALETLDAARTKDAEVNNGSSAREID 250 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHH
Confidence 99999999999999999999999 7665543
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-12 Score=120.38 Aligned_cols=106 Identities=13% Similarity=-0.002 Sum_probs=102.4
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
...+..+..+|..++..|+|++|+..|+++++++|+ +..++.++|.+|...|++++|+..|+++++++|+++.+++++|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 467889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
.++..+|++++|+..|+++++++|++.
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999875
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.43 E-value=3.7e-13 Score=106.50 Aligned_cols=87 Identities=16% Similarity=0.137 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhh
Q 012608 368 KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGT 447 (460)
Q Consensus 368 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 447 (460)
++|++.|+++++.+|+ ++.+++++|.+|...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccc
Q 012608 448 TLEAKKNS 455 (460)
Q Consensus 448 ~l~~~~~~ 455 (460)
+++|....
T Consensus 81 ~~~~~~~~ 88 (115)
T 2kat_A 81 AAAQSRGD 88 (115)
T ss_dssp HHHHHHTC
T ss_pred Hhcccccc
Confidence 99997653
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.41 E-value=7.1e-13 Score=121.15 Aligned_cols=108 Identities=13% Similarity=0.014 Sum_probs=100.1
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc---HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCc---chHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPI---WHIA 422 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~---~~~a 422 (460)
.++..++.+|..+++.|+|++|+..|+++++.+|+ + ..+++.+|.+|..+|++++|+..|+++++++|+ .+.+
T Consensus 13 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 13 SSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 34678999999999999999999999999999999 6 789999999999999999999999999999884 4789
Q ss_pred HHHHHHHHHh--------cCChHHHHHHHHHhhhhhhhccccc
Q 012608 423 SYLQAAALSA--------MGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 423 ~~~~g~~~~~--------~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++++|.++.. +|++++|+..|+++++++|++..++
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 9999999999 9999999999999999999876543
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.5e-12 Score=114.73 Aligned_cols=102 Identities=14% Similarity=0.088 Sum_probs=95.4
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..++.+|..++..|+|++|++.|++++ +| ++.+++++|.+|...|++++|+..|+++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 456778999999999999999999999996 44 46899999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
++..+|++++|+++|+++++++|++.
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999998765
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.1e-13 Score=109.00 Aligned_cols=83 Identities=13% Similarity=-0.057 Sum_probs=76.1
Q ss_pred HHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 375 TQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 375 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
.++..+||+ .+..+.++|.+|++.|+|++|+..|++|++++|+++.+|+++|.++..+|++++|+.+|++|++++|++.
T Consensus 3 ar~a~inP~-~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 3 ARLAYINPE-LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp ----CCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhh
Confidence 355678999 8999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccC
Q 012608 455 STAG 458 (460)
Q Consensus 455 ~a~~ 458 (460)
.++.
T Consensus 82 ~a~~ 85 (126)
T 4gco_A 82 KGYI 85 (126)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7763
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.40 E-value=1e-12 Score=126.09 Aligned_cols=107 Identities=14% Similarity=0.034 Sum_probs=102.1
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..++.+|..+++.|+|++|+..|+++++.+|+ +..+++++|.+|...|++++|+..|+++++++|+++.+|+++|.+
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVS 142 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|+..|+++++++|++..++
T Consensus 143 ~~~~g~~~~A~~~~~~al~~~p~~~~~~ 170 (365)
T 4eqf_A 143 YTNTSHQQDACEALKNWIKQNPKYKYLV 170 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHHCC-
T ss_pred HHccccHHHHHHHHHHHHHhCccchHHH
Confidence 9999999999999999999999987765
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=116.98 Aligned_cols=107 Identities=9% Similarity=-0.032 Sum_probs=97.5
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc--HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchH---HHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS--PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI---ASYL 425 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~---a~~~ 425 (460)
+..++.+|..+++.|+|++|+..|+++++.+|+.. ..+++++|.+|...|++++|+..|+++++++|+++. +++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~ 83 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYM 83 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHH
Confidence 56789999999999999999999999999999822 368999999999999999999999999999999875 8999
Q ss_pred HHHHHHh------------------cCChHHHHHHHHHhhhhhhhccccc
Q 012608 426 QAAALSA------------------MGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 426 ~g~~~~~------------------~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+|.++.. +|++++|+..|+++++.+|+...++
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 84 RGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp HHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 9999886 6799999999999999999987653
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.38 E-value=3e-12 Score=103.14 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=96.1
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.+...+...|..+...|++++|+..|+++++.+|. ...++.++|.++...|++++|+..++++++++|++..+++.+|.
T Consensus 33 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 111 (136)
T 2fo7_A 33 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGN 111 (136)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 34677888999999999999999999999999999 88889999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhh
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
++..+|++++|+..|+++++++|+
T Consensus 112 ~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 112 AYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHccHHHHHHHHHHHHccCCC
Confidence 999999999999999999999886
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.8e-13 Score=132.92 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=101.0
Q ss_pred HHHhHHhhhHHHhh---------CCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhc--------CChHHHHHHHHHhh
Q 012608 351 TLNSKKKGDVAFRQ---------KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS--------DMPQDALNDAMQAQ 413 (460)
Q Consensus 351 ~~~~~~~g~~~~~~---------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~a~ 413 (460)
+..+..+|..+... |+|++|++.|++|++++|+ +..+|+++|.+|..+ |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 58899999999999 9999999999999999999 899999999999999 99999999999999
Q ss_pred hhCC---cchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 414 IISP---IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 414 ~l~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+++| +++.+|+++|.+|..+|++++|+++|++|++++|++..++
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~ 295 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQ 295 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999 9999999999999999999999999999999999987665
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.38 E-value=9.8e-13 Score=100.87 Aligned_cols=94 Identities=15% Similarity=0.090 Sum_probs=87.6
Q ss_pred hHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHH-HHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHh
Q 012608 354 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT-VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 432 (460)
Q Consensus 354 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 432 (460)
.+++|..++..|+|++|+..|+++++.+|+ +.. +++++|.+|..+|++++|+..|+++++++|+++.++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 467899999999999999999999999999 888 99999999999999999999999999999999999876
Q ss_pred cCChHHHHHHHHHhhhhhhhcccc
Q 012608 433 MGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 433 ~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+.+.+|+..|++++.++|++...
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~~~ 97 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHHHH 97 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCSSC
T ss_pred -HHHHHHHHHHHHHhccCcccccC
Confidence 67889999999999999987643
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=133.08 Aligned_cols=102 Identities=15% Similarity=0.023 Sum_probs=51.0
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 431 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 431 (460)
..+..+|..++..|+|++|++.|+++++++|+ +..++.++|.+|..+|++++|+..|+++++++|+++.+|+++|.++.
T Consensus 24 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 102 (568)
T 2vsy_A 24 VAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE 102 (568)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34444455555555555555555555555554 44444455555555555555555555555555555555555555555
Q ss_pred hcCChHHHHHHHHHhhhhhhhcc
Q 012608 432 AMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 432 ~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
.+|++++|++.|++|++++|++.
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~~ 125 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEEP 125 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCH
Confidence 55555555555555555544443
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.36 E-value=7e-12 Score=100.94 Aligned_cols=104 Identities=18% Similarity=0.182 Sum_probs=98.5
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 431 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 431 (460)
..+...|..++..|++++|+..|.++++.+|. +...+..+|.++...|++++|+..++++++++|+++.+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 46788999999999999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHhhhhhhhcccc
Q 012608 432 AMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 432 ~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
..|++++|++.|+++++++|.+..+
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~ 105 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEA 105 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHH
Confidence 9999999999999999999877544
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=4.4e-13 Score=111.41 Aligned_cols=89 Identities=10% Similarity=-0.070 Sum_probs=82.5
Q ss_pred HHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhh
Q 012608 368 KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGT 447 (460)
Q Consensus 368 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 447 (460)
-.+-..|+++++++|+ +...++++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+++|++|+
T Consensus 4 ~~~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 82 (148)
T 2vgx_A 4 GSGGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGA 82 (148)
T ss_dssp --CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cchhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3444578999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccccc
Q 012608 448 TLEAKKNSTA 457 (460)
Q Consensus 448 ~l~~~~~~a~ 457 (460)
+++|++..++
T Consensus 83 ~l~p~~~~~~ 92 (148)
T 2vgx_A 83 VMDIXEPRFP 92 (148)
T ss_dssp HHSTTCTHHH
T ss_pred hcCCCCchHH
Confidence 9999987664
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.36 E-value=6.6e-12 Score=107.30 Aligned_cols=107 Identities=14% Similarity=0.048 Sum_probs=101.6
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
+...+...|..+...|++++|++.|+++++.+|. +..++..+|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 75 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 153 (186)
T 3as5_A 75 NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFS 153 (186)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 4667889999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|+..|+++++++|++..+.
T Consensus 154 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 181 (186)
T 3as5_A 154 YEQMGRHEEALPHFKKANELDEGASVEL 181 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHcCCHHHHHHHHHHHHHcCCCchhhH
Confidence 9999999999999999999999887553
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.36 E-value=4.6e-12 Score=114.66 Aligned_cols=106 Identities=12% Similarity=0.009 Sum_probs=85.0
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhh--hCCcchHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI--ISPIWHIASYLQA 427 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--l~p~~~~a~~~~g 427 (460)
.+..+...|..+...|++++|++.|+++++.+|. +..++.++|.++...|++++|+..++++++ .+|.++.+++.+|
T Consensus 70 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la 148 (252)
T 2ho1_A 70 SADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLG 148 (252)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHH
Confidence 4667778888888888888888888888888887 777788888888888888888888888888 7777888888888
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
.++..+|++++|++.|+++++++|.+..+
T Consensus 149 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 177 (252)
T 2ho1_A 149 LVSLQMKKPAQAKEYFEKSLRLNRNQPSV 177 (252)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCcccHHH
Confidence 88888888888888888888887765443
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.9e-12 Score=121.86 Aligned_cols=107 Identities=17% Similarity=0.198 Sum_probs=102.2
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..+...|..++..|+|++|+..|+++++.+|+ ++.++.++|.++...|++++|+..++++++++|++..+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 5778999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhh---hccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEA---KKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~---~~~~a~ 457 (460)
+..+|++++|+..|+++++++| ++..++
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 111 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNPSEQEEKEAE 111 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHhcCCcccChHHHH
Confidence 9999999999999999999999 665543
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.7e-12 Score=122.16 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=99.8
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..+..+|..+...|++++|++.|+++++.+|+ +..+|.++|.+|...|++++|+..|+++++++|+++.+|+++|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 4668899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
+..+|++++|+..|++|++++|+..
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~~ 315 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKSR 315 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC-
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccC
Confidence 9999999999999999999999853
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=4.2e-12 Score=117.91 Aligned_cols=103 Identities=11% Similarity=-0.077 Sum_probs=74.2
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++.++..+|..+.+.|++++|+..|+++++.+|+ ......+.+..+...++.++|+..++++++++|+++.+++++|.+
T Consensus 150 ~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~ 228 (287)
T 3qou_A 150 NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD-TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQ 228 (287)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc-hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHH
Confidence 3445555555555555555555555555555554 444444444445555555556667777788899999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
+..+|++++|++.|+++++++|++
T Consensus 229 l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 229 LHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHHcccHHHHHHHHHHHHhccccc
Confidence 999999999999999999999988
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-12 Score=130.40 Aligned_cols=107 Identities=9% Similarity=-0.037 Sum_probs=102.7
Q ss_pred HHHHHhHHhhhHHHhhCCH-HHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDL-KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
.++..++.+|..++..|+| ++|++.|++|++++|+ +..+|+++|.+|...|++++|+..|++|++++|+ +.+++++|
T Consensus 100 ~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg 177 (474)
T 4abn_A 100 VEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLS 177 (474)
T ss_dssp CCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHH
Confidence 4578899999999999999 9999999999999999 8999999999999999999999999999999999 79999999
Q ss_pred HHHHhc---------CChHHHHHHHHHhhhhhhhccccc
Q 012608 428 AALSAM---------GMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 428 ~~~~~~---------~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.++..+ |++++|++.|++|++++|++..+|
T Consensus 178 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 216 (474)
T 4abn_A 178 MVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSW 216 (474)
T ss_dssp HHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999 999999999999999999987765
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=4.4e-12 Score=113.86 Aligned_cols=101 Identities=17% Similarity=0.133 Sum_probs=49.6
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 431 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 431 (460)
..+...|..+...|++++|++.|+++++.+|. +..++..+|.++...|++++|+..++++++++|+++.+++.+|.++.
T Consensus 92 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (243)
T 2q7f_A 92 TAYYGAGNVYVVKEMYKEAKDMFEKALRAGME-NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLA 170 (243)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 34444444444445555555555555444444 44444444444444455555555555555555544444555555555
Q ss_pred hcCChHHHHHHHHHhhhhhhhc
Q 012608 432 AMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 432 ~~~~~~~A~~~~~~al~l~~~~ 453 (460)
.+|++++|+..|+++++++|++
T Consensus 171 ~~~~~~~A~~~~~~~~~~~~~~ 192 (243)
T 2q7f_A 171 NEGMLDEALSQFAAVTEQDPGH 192 (243)
T ss_dssp HHTCCHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHhCccc
Confidence 5555555555555554444443
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.34 E-value=8.2e-12 Score=106.69 Aligned_cols=107 Identities=14% Similarity=0.090 Sum_probs=100.9
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
+...+...|..+...|++++|++.|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 119 (186)
T 3as5_A 41 DVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVA 119 (186)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHH
Confidence 4667889999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|+..|+++++++|.+..++
T Consensus 120 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 147 (186)
T 3as5_A 120 LDNLGRFDEAIDSFKIALGLRPNEGKVH 147 (186)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHcCcHHHHHHHHHHHHhcCccchHHH
Confidence 9999999999999999999998875543
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=6.3e-12 Score=112.82 Aligned_cols=107 Identities=12% Similarity=0.057 Sum_probs=102.2
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
+...+...|..+...|++++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 124 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 202 (243)
T 2q7f_A 124 NGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVT 202 (243)
T ss_dssp SHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4567889999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|++.|+++++++|++..++
T Consensus 203 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 203 YAYKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHccCHHHHHHHHHHHHccCcchHHHH
Confidence 9999999999999999999999987664
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.33 E-value=5.2e-12 Score=115.45 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=99.2
Q ss_pred ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCc--cceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR--LTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~--iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.+.+....+.|..+.||++...+|+.+++|+.... ....+.+|+.+++.+.+.+ +++++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34443333466679999998777888999997654 2356789999999995434 567888888777889999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG---------------------------------------- 144 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---------------------------------------- 144 (460)
+|.+|. .. . .+ ...++.+++..|..||+..
T Consensus 98 ~G~~l~--~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 98 PGQDLL--SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp SSEETT--TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred CCcccC--cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 998884 21 1 11 1245677777777777632
Q ss_pred -----------------CcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 145 -----------------RALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 145 -----------------~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
.++|+|++|.||++++++.+.|+|||.+.
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 18999999999999877667799999864
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.2e-12 Score=115.09 Aligned_cols=105 Identities=11% Similarity=-0.002 Sum_probs=81.2
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
+..+..+|..+...|++++|++.|+++++.+|+ ...++.++|.+|...|++++|+..++++++++|+++.+|+++|...
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 152 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAY 152 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 345677888888888888888888888888888 7777888888888888888888888888888888888888888444
Q ss_pred HhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 431 SAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+..+++++|++.|+++++++|++..+
T Consensus 153 ~~~~~~~~A~~~~~~a~~~~p~~~~~ 178 (272)
T 3u4t_A 153 YYNKEYVKADSSFVKVLELKPNIYIG 178 (272)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccchHH
Confidence 44458888888888888888776544
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.32 E-value=3.6e-12 Score=98.10 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=65.8
Q ss_pred cCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 380 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 380 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
.+|+ ++.+++++|.+|...|++++|+..|+++++++|+++.+|+++|.+|..+|++++|++.|++|++++|+....
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 4688 888899999999999999999999999999999999999999999999999999999999999998876544
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.6e-13 Score=116.23 Aligned_cols=104 Identities=11% Similarity=0.041 Sum_probs=91.3
Q ss_pred HhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH-HH
Q 012608 353 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-LS 431 (460)
Q Consensus 353 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~-~~ 431 (460)
.+...+..+...|+|++|+..|+++++.+|+ +..++..+|.+|...|++++|+..|+++++++|+++.+++++|.+ +.
T Consensus 12 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~ 90 (177)
T 2e2e_A 12 RQRDPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYY 90 (177)
T ss_dssp CSSTTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3445556677899999999999999999999 899999999999999999999999999999999999999999999 88
Q ss_pred hcCCh--HHHHHHHHHhhhhhhhccccc
Q 012608 432 AMGME--NEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 432 ~~~~~--~~A~~~~~~al~l~~~~~~a~ 457 (460)
..|++ ++|+..|+++++++|++..++
T Consensus 91 ~~~~~~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 91 QASQHMTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp HTTTCCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred hcCCcchHHHHHHHHHHHHhCCCcHHHH
Confidence 99999 999999999999999987654
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.32 E-value=9.2e-12 Score=124.79 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=100.9
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
....+..++.+|..+++.|+|++|+..|+++++.+|+ ..++.++|.++...|++++|+..++++++++|+++.+|+.+
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 79 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRR 79 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHH
Confidence 3467899999999999999999999999999999996 78899999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhhhccc
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
|.++..+|++++|+..|+++++++|.+..
T Consensus 80 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 80 ASANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999999985543
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.32 E-value=6.9e-12 Score=120.10 Aligned_cols=103 Identities=13% Similarity=0.158 Sum_probs=100.1
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
.+..+..+|..+...|++++|+..|+++++++|+ +..++.++|.++...|++++|+..|+++++++|+++.+++++|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
+..+|++++|+..|+++++++|++
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999987
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.32 E-value=6.8e-12 Score=120.17 Aligned_cols=107 Identities=9% Similarity=0.050 Sum_probs=102.3
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
+..++.+|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..|+++++++|+++.+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 556789999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 431 SAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
..+|++++|++.|+++++++|++..++.
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 170 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAYAHLVT 170 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTGGGCC
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 9999999999999999999999887663
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.32 E-value=7.2e-12 Score=113.32 Aligned_cols=106 Identities=15% Similarity=0.059 Sum_probs=96.1
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhh--------------------------cCCCccHHHHhhHHHHHHhcCChHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFID--------------------------AGTMVSPTVYARRSLCYLMSDMPQD 404 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~--------------------------~~p~~~~~~~~~~~~~~~~~~~~~~ 404 (460)
+..+..+|..+...|++++|++.|+++++ .+|. ...++.++|.++...|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPE-KAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHhcCHHH
Confidence 56777788888888888888888888877 7777 78899999999999999999
Q ss_pred HHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 405 ALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 405 A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
|+..++++++++|+++.+|+++|.++..+|++++|+..|+++++++|++..++
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 210 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAY 210 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987654
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.32 E-value=4.1e-12 Score=116.33 Aligned_cols=108 Identities=5% Similarity=-0.109 Sum_probs=96.3
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCC---ccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
.++..+..+|..++..|+|++|++.|+++++ .|. ....+|.++|.++...|++++|+..|+++++++|+++.+|++
T Consensus 35 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 113 (272)
T 3u4t_A 35 NSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQ 113 (272)
T ss_dssp CCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHH
T ss_pred CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHH
Confidence 4567899999999999999999999999999 443 123348999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+|.++..+|++++|+..|+++++++|.+..++
T Consensus 114 l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 145 (272)
T 3u4t_A 114 IGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVF 145 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHhhcCCCcHHHH
Confidence 99999999999999999999999999887654
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.32 E-value=1.1e-11 Score=118.97 Aligned_cols=163 Identities=13% Similarity=0.164 Sum_probs=115.6
Q ss_pred CCCccccCHHHHHHHh----cCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEec--CCC-CCCHHHHHHHHHHHhcC
Q 012608 7 LPSFREFTLEQLKNAT----SGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFN--RMA-WPDPRQFLEEARSVGQL 79 (460)
Q Consensus 7 ~~~~~~~~~~~~~~~~----~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l 79 (460)
+..-..++...|.... .++....-++.++.|.++.||+.... +..+++|+.. ... ......+.+|+.+++.+
T Consensus 15 ~~~~~~ld~~~l~~~l~~~~~~~~~~~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L 93 (359)
T 3dxp_A 15 VADQQRFDTEALEAWMRQHVEGFAGPLSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDAL 93 (359)
T ss_dssp -----CCCHHHHHHHHHHHSTTCCCCCEEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHH
T ss_pred CCcccCCCHHHHHHHHHHhCCCCCCCceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHh
Confidence 3444567776665443 23444445778899999999999865 4678888865 322 12245788999999999
Q ss_pred C--CCccceeeeEEeeC---CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----------
Q 012608 80 R--NNRLTNLLGCCCEG---DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK----------- 143 (460)
Q Consensus 80 ~--h~~iv~~~~~~~~~---~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----------- 143 (460)
. +..+++++.++... +..++|||+++|.++.+.. ...++......++.+++..|..||+.
T Consensus 94 ~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~ 169 (359)
T 3dxp_A 94 AGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYG 169 (359)
T ss_dssp TTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSS
T ss_pred hcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccC
Confidence 6 45688999988766 4589999999998875422 23467888889999999999999972
Q ss_pred ----------------------------------------------CCcccccccCCcEEEcCCCC--eEEccCCCccc
Q 012608 144 ----------------------------------------------GRALYHDLNAYRILFDEDGN--PRLSTFGLMKN 174 (460)
Q Consensus 144 ----------------------------------------------~~iiH~Dikp~Nill~~~~~--~kl~DFg~a~~ 174 (460)
..++|+|+++.|||++.++. +.|+||+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 170 KPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 12899999999999987653 68999998754
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.32 E-value=4.6e-12 Score=127.89 Aligned_cols=109 Identities=21% Similarity=0.306 Sum_probs=95.7
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
....+..++.+|..+++.|+|++|+..|+++++.+|+ ++.++.++|.+|..+|++++|+..|+++++++|+++.+++.+
T Consensus 21 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 99 (537)
T 3fp2_A 21 RQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRR 99 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 4467899999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
|.++..+|++++|+..|+ ++.++|+...++
T Consensus 100 a~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~ 129 (537)
T 3fp2_A 100 ASANESLGNFTDAMFDLS-VLSLNGDFDGAS 129 (537)
T ss_dssp HHHHHHHTCHHHHHHHHH-HHC---------
T ss_pred HHHHHHcCCHHHHHHHHH-HHhcCCCCChHH
Confidence 999999999999999995 999998876553
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=7.5e-12 Score=121.16 Aligned_cols=107 Identities=13% Similarity=0.049 Sum_probs=98.3
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
.+..+..+|..+.+.|++++|++.|+++++++|+ +..++.+++.++...|++++|+..++++++++|+++.+++++|.+
T Consensus 270 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 348 (388)
T 1w3b_A 270 FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV 348 (388)
T ss_dssp CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 4567889999999999999999999999999999 888999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|++.|+++++++|++..++
T Consensus 349 ~~~~g~~~~A~~~~~~a~~~~p~~~~a~ 376 (388)
T 1w3b_A 349 LQQQGKLQEALMHYKEAIRISPTFADAY 376 (388)
T ss_dssp HHTTTCCHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhhCCCCHHHH
Confidence 9999999999999999999999887665
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-11 Score=92.44 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=80.1
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
..+..+..+|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678899999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHhcC
Q 012608 429 ALSAMG 434 (460)
Q Consensus 429 ~~~~~~ 434 (460)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 988765
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.31 E-value=7.5e-12 Score=121.14 Aligned_cols=107 Identities=12% Similarity=-0.007 Sum_probs=88.5
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
....+..+|..+.+.|++++|++.|+++++.+|+ ...++.++|.++..+|++++|+..|+++++++|+++.+|+++|.+
T Consensus 100 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 178 (388)
T 1w3b_A 100 FIDGYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCV 178 (388)
T ss_dssp CHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4556788888888888888888888888888888 777888888888888888888888888888888888888888888
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|++.|+++++++|++..++
T Consensus 179 ~~~~g~~~~A~~~~~~al~~~p~~~~~~ 206 (388)
T 1w3b_A 179 FNAQGEIWLAIHHFEKAVTLDPNFLDAY 206 (388)
T ss_dssp HHTTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 8888888888888888888888776554
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.30 E-value=8.3e-12 Score=113.99 Aligned_cols=104 Identities=14% Similarity=0.114 Sum_probs=96.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc--cHHHHhhHHHHHHh--------cCChHHHHHHHHHhhhhCCcch
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--SPTVYARRSLCYLM--------SDMPQDALNDAMQAQIISPIWH 420 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~~~~--------~~~~~~A~~~~~~a~~l~p~~~ 420 (460)
+.+++.+|.++++.|+|++|+..|+++++.+|++ ...+++++|.++.. .|++++|+..|+++++++|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 7789999999999999999999999999998852 46789999999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 421 IAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 421 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
.++ +.+|.+|..+|++++|+..|+++++.+|+..
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 777 8999999999999999999999999999853
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.30 E-value=9.8e-12 Score=122.60 Aligned_cols=106 Identities=19% Similarity=0.213 Sum_probs=102.5
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..++..+..+|..+++.|+|++|+..|+++++.+|+ +..+++.+|.++...|++++|+..|+++++++|+++.+++.+|
T Consensus 23 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 101 (450)
T 2y4t_A 23 MADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRG 101 (450)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 367889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
.++..+|++++|++.|+++++++|++.
T Consensus 102 ~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 102 HLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 999999999999999999999999876
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=7.9e-12 Score=116.37 Aligned_cols=108 Identities=12% Similarity=0.007 Sum_probs=91.7
Q ss_pred HHHHHhHHhhhHHHhh-CCHHHHHHHHHHHhhcCCCcc-----HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchH-
Q 012608 349 QETLNSKKKGDVAFRQ-KDLKDAIECYTQFIDAGTMVS-----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI- 421 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~-~~~~~A~~~~~~al~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~- 421 (460)
..+..+.++|.++... |+|++|+.+|++|+++.|.+. ..++.++|.+|..+|++++|+..|+++++++|++..
T Consensus 115 ~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 3467889999999996 999999999999999988621 467899999999999999999999999999998654
Q ss_pred ------HHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 422 ------ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 422 ------a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+|+++|.++..+|++++|+.+|+++++++|+...+
T Consensus 195 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 195 QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 68999999999999999999999999999987654
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.29 E-value=2e-11 Score=107.97 Aligned_cols=108 Identities=14% Similarity=0.051 Sum_probs=96.4
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhc-CChHHHHHHHHHhhh--hCCcchHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-DMPQDALNDAMQAQI--ISPIWHIASYL 425 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~--l~p~~~~a~~~ 425 (460)
.+...+...|..+...|++++|++.|+++++.+|+ +..++.++|.++... |++++|+..++++++ .+|++..+++.
T Consensus 40 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 118 (225)
T 2vq2_A 40 KNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLN 118 (225)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHH
Confidence 44678889999999999999999999999999999 888899999999999 999999999999999 77777899999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+|.++..+|++++|+..|+++++++|.+..++
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 150 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAAQPQFPPAF 150 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCchHH
Confidence 99999999999999999999999988876543
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.7e-11 Score=115.08 Aligned_cols=107 Identities=14% Similarity=0.107 Sum_probs=98.3
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccH----HHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
........|..++..|++++|+..|+++++.+|+ +. .++..+|.++...|++++|+..++++++++|+++.+|++
T Consensus 233 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 311 (359)
T 3ieg_A 233 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKD 311 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 3445567799999999999999999999999999 55 346679999999999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+|.++..+|++++|++.|++|++++|++..++
T Consensus 312 ~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~ 343 (359)
T 3ieg_A 312 RAEAYLIEEMYDEAIQDYEAAQEHNENDQQIR 343 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCChHHH
Confidence 99999999999999999999999999987765
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.9e-11 Score=110.47 Aligned_cols=107 Identities=12% Similarity=-0.019 Sum_probs=100.6
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
..+..+..+|..++..|++++|++.|+++++.+|. ...++..+|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 113 (252)
T 2ho1_A 35 EARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPS-SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGG 113 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHH
Confidence 34788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhh--hhhhcccc
Q 012608 429 ALSAMGMENEAQVALKEGTT--LEAKKNST 456 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~--l~~~~~~a 456 (460)
++..+|++++|++.|+++++ .+|.+..+
T Consensus 114 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 143 (252)
T 2ho1_A 114 FLYEQKRYEEAYQRLLEASQDTLYPERSRV 143 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHhCccCcccHHH
Confidence 99999999999999999999 66665443
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.9e-11 Score=110.84 Aligned_cols=110 Identities=10% Similarity=0.016 Sum_probs=104.0
Q ss_pred HHHHHHhHHhhhHHHhhC--CHHHHHHHHHHHhhcCCCccHHHHhhHHHHH----Hhc---CChHHHHHHHHHhhhhCCc
Q 012608 348 MQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCY----LMS---DMPQDALNDAMQAQIISPI 418 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~----~~~---~~~~~A~~~~~~a~~l~p~ 418 (460)
.....+|..+|.++...| ++++|++.++++|..+|. +..+|+.|+.++ ..+ ++++++++.++++++++|.
T Consensus 64 P~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk 142 (306)
T 3dra_A 64 ASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK 142 (306)
T ss_dssp TTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC
Confidence 367889999999999999 999999999999999999 889999999999 666 7899999999999999999
Q ss_pred chHHHHHHHHHHHhcCChH--HHHHHHHHhhhhhhhcccccC
Q 012608 419 WHIASYLQAAALSAMGMEN--EAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 419 ~~~a~~~~g~~~~~~~~~~--~A~~~~~~al~l~~~~~~a~~ 458 (460)
+..+|+++|.++..++.++ ++++++++++++||.|..||.
T Consensus 143 ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~ 184 (306)
T 3dra_A 143 NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 184 (306)
T ss_dssp CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999 999999999999999999985
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.26 E-value=1.7e-11 Score=116.47 Aligned_cols=99 Identities=11% Similarity=-0.002 Sum_probs=93.2
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
.+..+.++|.++++.|+|++|+..|++|++++|+ +..+++++|.+|..+|++++|+.+|++|++++|++..+++++|.+
T Consensus 195 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 4678999999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHH-HHHHHHhhhh
Q 012608 430 LSAMGMENEA-QVALKEGTTL 449 (460)
Q Consensus 430 ~~~~~~~~~A-~~~~~~al~l 449 (460)
+..+|++++| ...|++++..
T Consensus 274 ~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 274 QQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 5567777654
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.26 E-value=2e-11 Score=104.38 Aligned_cols=106 Identities=12% Similarity=-0.049 Sum_probs=89.1
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHH-HHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
...++..+..+|..+...|++++|+..|+++++.+| + +.++...+.+ +...++..+|+..++++++++|+++.++++
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~-~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~ 113 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-D-NSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACE 113 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-C-HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-C-hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHH
Confidence 446788899999999999999999999999999999 3 4445444433 333344556899999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
+|.++..+|++++|+..|+++++++|+..
T Consensus 114 la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 142 (176)
T 2r5s_A 114 LAVQYNQVGRDEEALELLWNILKVNLGAQ 142 (176)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHcccHHHHHHHHHHHHHhCcccC
Confidence 99999999999999999999999998753
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.3e-11 Score=115.97 Aligned_cols=108 Identities=15% Similarity=0.070 Sum_probs=101.2
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcC---------CCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG---------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~---------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 419 (460)
.++..+..+|..+...|++++|+..|+++++.. |. ...++.++|.++...|++++|+..++++++++|++
T Consensus 191 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 269 (330)
T 3hym_B 191 EDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK-WEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQN 269 (330)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT-CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred CChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccc
Confidence 456789999999999999999999999999986 55 67899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 420 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 420 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+.+|+++|.++..+|++++|++.|+++++++|++..++
T Consensus 270 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 307 (330)
T 3hym_B 270 ASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSV 307 (330)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHH
Confidence 99999999999999999999999999999999987654
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.26 E-value=5.7e-12 Score=103.77 Aligned_cols=85 Identities=7% Similarity=-0.067 Sum_probs=78.2
Q ss_pred HHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhh
Q 012608 372 ECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 372 ~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 451 (460)
..|.++++++|+ +...++++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|++|++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 578899999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccc
Q 012608 452 KKNSTA 457 (460)
Q Consensus 452 ~~~~a~ 457 (460)
++..++
T Consensus 84 ~~~~~~ 89 (142)
T 2xcb_A 84 NEPRFP 89 (142)
T ss_dssp TCTHHH
T ss_pred CCcHHH
Confidence 987664
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-11 Score=99.76 Aligned_cols=72 Identities=8% Similarity=-0.133 Sum_probs=68.4
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 385 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
.+.++.++|.++++.|+|++|+..|++|++++|+++.+|+++|.+|..+|+|++|+++|++|++++|+...+
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~ 78 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRAD 78 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchh
Confidence 567889999999999999999999999999999999999999999999999999999999999999987653
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=3e-11 Score=123.34 Aligned_cols=107 Identities=10% Similarity=-0.006 Sum_probs=102.4
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..+..+|..+...|++++|++.|+++++++|+ +..+++++|.+|..+|++++|++.|+++++++|+++.+++++|.
T Consensus 55 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 133 (568)
T 2vsy_A 55 GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLN 133 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhc---CChHHHHHHHHHhhhhhhhcccc
Q 012608 429 ALSAM---GMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 429 ~~~~~---~~~~~A~~~~~~al~l~~~~~~a 456 (460)
++..+ |++++|++.|+++++++|....+
T Consensus 134 ~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 164 (568)
T 2vsy_A 134 WRRRLCDWRALDVLSAQVRAAVAQGVGAVEP 164 (568)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHHTCCCSCH
T ss_pred HHHHhhccccHHHHHHHHHHHHhcCCcccCh
Confidence 99999 99999999999999999987544
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.7e-11 Score=105.50 Aligned_cols=106 Identities=8% Similarity=-0.015 Sum_probs=98.1
Q ss_pred HHHHhHHhhhHHHhh-CCHHHHHHHHHHHhh--cCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQ-KDLKDAIECYTQFID--AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
+...+...|..+... |++++|+..|+++++ .+|. ...++.++|.++...|++++|+..++++++++|+++.+++.+
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 153 (225)
T 2vq2_A 75 SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKEL 153 (225)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHH
Confidence 567888999999999 999999999999999 6676 788999999999999999999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhh-hcccc
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEA-KKNST 456 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~-~~~~a 456 (460)
|.++..+|++++|++.|+++++++| .+..+
T Consensus 154 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 184 (225)
T 2vq2_A 154 ARTKMLAGQLGDADYYFKKYQSRVEVLQADD 184 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCSCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCCHHH
Confidence 9999999999999999999999999 66544
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.3e-11 Score=113.04 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=99.2
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..+..+|..+...|++++|++.|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 249 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVS 249 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4678899999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhh
Q 012608 430 LSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
+..+|++++|++.|+++++++|+
T Consensus 250 ~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 250 YSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHhccHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999998
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.7e-11 Score=112.62 Aligned_cols=94 Identities=11% Similarity=-0.007 Sum_probs=87.4
Q ss_pred HhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHH-HH
Q 012608 362 FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENE-AQ 440 (460)
Q Consensus 362 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~-A~ 440 (460)
...|++++|+..|+++++.+|+ ++.+++++|.++..+|++++|+..+++|++++|+++.+++++|.++..+|++++ |.
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~ 255 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTN 255 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHH
Confidence 3558999999999999999999 899999999999999999999999999999999999999999999999999986 56
Q ss_pred HHHHHhhhhhhhcccc
Q 012608 441 VALKEGTTLEAKKNST 456 (460)
Q Consensus 441 ~~~~~al~l~~~~~~a 456 (460)
++++++++++|++..+
T Consensus 256 ~~~~~~~~~~P~~~~~ 271 (291)
T 3mkr_A 256 RYLSQLKDAHRSHPFI 271 (291)
T ss_dssp HHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHhCCCChHH
Confidence 8889999999998643
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3e-11 Score=113.33 Aligned_cols=107 Identities=12% Similarity=0.055 Sum_probs=101.5
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..++.+|..++..|+|++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|+++.+++.+|.+
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 98 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 98 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHH
Confidence 4567889999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|++.|+++++++|+...++
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 126 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLSQPQYEQLG 126 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTTTC-
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccHHHH
Confidence 9999999999999999999999887655
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.5e-11 Score=108.24 Aligned_cols=103 Identities=15% Similarity=0.049 Sum_probs=93.2
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccH---HHHhhHHHHHHh------------------cCChHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP---TVYARRSLCYLM------------------SDMPQDALNDA 409 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~------------------~~~~~~A~~~~ 409 (460)
..+++.+|.++++.|+|++|+..|+++++.+|+ +. .+++.+|.++.. .|++++|+..|
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 468899999999999999999999999999999 54 378889998886 57899999999
Q ss_pred HHhhhhCCcchHHH-----------------HHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 410 MQAQIISPIWHIAS-----------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 410 ~~a~~l~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
+++++.+|+++.++ +.+|.+|..+|++++|+..|+++++.+|++.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 99999999998665 6789999999999999999999999998865
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.7e-11 Score=112.61 Aligned_cols=109 Identities=14% Similarity=-0.061 Sum_probs=94.6
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHH--HHHHhcCChHHHHHHHHHhhhhCCcchHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRS--LCYLMSDMPQDALNDAMQAQIISPIWHIASYLQ 426 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~ 426 (460)
.+...+..+|..+.+.|++++|+..|+++++.+|+ ........+ ..+...|++++|+..|+++++.+|+++.+|+++
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 45678899999999999999999999999999999 543332222 233345899999999999999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 427 AAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 427 g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
|.++..+|++++|++.|++|++++|++..++.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~ 238 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHPETLI 238 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 99999999999999999999999999987753
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=2e-11 Score=113.67 Aligned_cols=107 Identities=8% Similarity=-0.187 Sum_probs=96.5
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----cHHHHhhHHHHHHhc-CChHHHHHHHHHhhhhCCcc---
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMS-DMPQDALNDAMQAQIISPIW--- 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~l~p~~--- 419 (460)
..+..+.++|.++...|+|++|+.+|++|+++.|.. ...++.++|.+|... |++++|+..|++|+++.|+.
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 457889999999999999999999999999987751 146899999999996 99999999999999999865
Q ss_pred ---hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccc
Q 012608 420 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 420 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
..++.++|.++..+|+|++|+..|+++++++|++..
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 678999999999999999999999999999988754
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=8.6e-11 Score=94.56 Aligned_cols=86 Identities=9% Similarity=-0.031 Sum_probs=82.0
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.+...+..+|..++..|++++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|++..+++.+|.
T Consensus 48 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 126 (133)
T 2lni_A 48 KDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQR 126 (133)
T ss_dssp TCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 45788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhcCC
Q 012608 429 ALSAMGM 435 (460)
Q Consensus 429 ~~~~~~~ 435 (460)
++..+|+
T Consensus 127 ~~~~~~~ 133 (133)
T 2lni_A 127 CMMAQYN 133 (133)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 9988774
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.23 E-value=5.1e-11 Score=100.05 Aligned_cols=103 Identities=13% Similarity=0.009 Sum_probs=94.2
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.+...+..+|..+...|+|++|+..|+++++++|+ +..+++++|.++..+|++++|+..++++++++|++..++..++.
T Consensus 45 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~ 123 (166)
T 1a17_A 45 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 123 (166)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 35778999999999999999999999999999999 89999999999999999999999999999999999999955555
Q ss_pred --HHHhcCChHHHHHHHHHhhhhhhh
Q 012608 429 --ALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 429 --~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
.+..+|++++|++.+.++..+-+.
T Consensus 124 ~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 124 CNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccchHHHhcc
Confidence 488899999999999999877554
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.22 E-value=8.8e-12 Score=124.23 Aligned_cols=108 Identities=15% Similarity=0.048 Sum_probs=96.7
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..+.++|.++++.|+|++|++.|++|++++|+ +..+++++|.+|..+|++++|++.|++|++++|+++.++.++|.
T Consensus 38 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~ 116 (477)
T 1wao_1 38 SNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQE 116 (477)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 34788999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred H--HHhcCChHHHHHHHH-----------Hhhhhhhhccccc
Q 012608 429 A--LSAMGMENEAQVALK-----------EGTTLEAKKNSTA 457 (460)
Q Consensus 429 ~--~~~~~~~~~A~~~~~-----------~al~l~~~~~~a~ 457 (460)
+ +..+|++++|++.++ ++++++|+...++
T Consensus 117 ~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~ 158 (477)
T 1wao_1 117 CNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPK 158 (477)
T ss_dssp HHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCC
T ss_pred HHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccc
Confidence 8 889999999999999 9999988876554
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.5e-11 Score=112.29 Aligned_cols=106 Identities=6% Similarity=-0.011 Sum_probs=81.6
Q ss_pred HHHHhHHhhhHHHhhC-CHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
++..+..+|..+...| ++++|+..|+++++.+|+ +..++..+|.++...|++++|+..++++++++|++..+++.+|.
T Consensus 89 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 167 (330)
T 3hym_B 89 NPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKT-YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGL 167 (330)
T ss_dssp STHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTT-CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 4556777777777777 777788888888777777 67777777777777788878888888888777777777777787
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
++..+|++++|++.|+++++++|++..+
T Consensus 168 ~~~~~~~~~~A~~~~~~al~~~~~~~~~ 195 (330)
T 3hym_B 168 EYGLTNNSKLAERFFSQALSIAPEDPFV 195 (330)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTCHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhCCCChHH
Confidence 7777888888888888887777776544
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.21 E-value=6.7e-11 Score=116.55 Aligned_cols=107 Identities=14% Similarity=0.107 Sum_probs=98.5
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccH----HHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
....+...|..+...|++++|+..|+++++.+|+ ++ .++.++|.++.+.|++++|+..++++++++|+++.+|+.
T Consensus 256 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~ 334 (450)
T 2y4t_A 256 KLNKLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKD 334 (450)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 3444566799999999999999999999999999 53 478999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+|.++..+|++++|+.+|+++++++|++..++
T Consensus 335 l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 366 (450)
T 2y4t_A 335 RAEAYLIEEMYDEAIQDYETAQEHNENDQQIR 366 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCcchHHHH
Confidence 99999999999999999999999999987654
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=8.4e-11 Score=107.49 Aligned_cols=104 Identities=10% Similarity=0.027 Sum_probs=78.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc-----------
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW----------- 419 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~----------- 419 (460)
+..+..+|..+...|+|++|+..|+++++++|+ +..++.++|.+|...|++++|+..++++++++|++
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 155 (275)
T 1xnf_A 77 PEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAE 155 (275)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 456677777777777777777777777777777 66777777777777777777777777777777765
Q ss_pred -----------------------------------------------------------hHHHHHHHHHHHhcCChHHHH
Q 012608 420 -----------------------------------------------------------HIASYLQAAALSAMGMENEAQ 440 (460)
Q Consensus 420 -----------------------------------------------------------~~a~~~~g~~~~~~~~~~~A~ 440 (460)
+.+|+.+|.++..+|++++|+
T Consensus 156 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 235 (275)
T 1xnf_A 156 QKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSAT 235 (275)
T ss_dssp HHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHH
Confidence 366777888888888888888
Q ss_pred HHHHHhhhhhhhccc
Q 012608 441 VALKEGTTLEAKKNS 455 (460)
Q Consensus 441 ~~~~~al~l~~~~~~ 455 (460)
..|+++++++|++..
T Consensus 236 ~~~~~al~~~p~~~~ 250 (275)
T 1xnf_A 236 ALFKLAVANNVHNFV 250 (275)
T ss_dssp HHHHHHHTTCCTTCH
T ss_pred HHHHHHHhCCchhHH
Confidence 888888888886543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=5.8e-11 Score=120.49 Aligned_cols=110 Identities=7% Similarity=-0.131 Sum_probs=104.3
Q ss_pred HHHHHHhHHhhhHHHhhCC----------HHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcC--ChHHHHHHHHHhhhh
Q 012608 348 MQETLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD--MPQDALNDAMQAQII 415 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~a~~l 415 (460)
.....+|..+|.++...|+ |++|++.++++++.+|. +..+|+.|+.++.+++ ++++|++.+++++++
T Consensus 60 P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~ 138 (567)
T 1dce_A 60 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEA 138 (567)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh
Confidence 3567899999999999888 99999999999999999 9999999999999999 669999999999999
Q ss_pred CCcchHHHHHHHHHHHhcC-ChHHHHHHHHHhhhhhhhcccccC
Q 012608 416 SPIWHIASYLQAAALSAMG-MENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 416 ~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+|.+..||+++|.++..+| .+++|++++++++++||.+..||.
T Consensus 139 d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 139 DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 9999999999999999999 999999999999999999999985
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.4e-11 Score=115.52 Aligned_cols=104 Identities=13% Similarity=-0.001 Sum_probs=60.3
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH-H
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA-L 430 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~-~ 430 (460)
..+.++|.++++.|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+.+|++|++++|+++.++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999999999 899999999999999999999999999999999999999999988 4
Q ss_pred HhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 431 SAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
...+..++|.+.|.+++.++|++...
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 55678899999999999999988653
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.16 E-value=3e-11 Score=103.34 Aligned_cols=105 Identities=12% Similarity=-0.011 Sum_probs=92.4
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
...+...|..+.+.|++++|+..|+++++.+|+ +..+++++|.++...|++++|+..++++++++| ++..+..+|.+.
T Consensus 6 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~ 83 (176)
T 2r5s_A 6 DEQLLKQVSELLQQGEHAQALNVIQTLSDELQS-RGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLE 83 (176)
T ss_dssp CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHT-SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHH
Confidence 346788999999999999999999999999999 899999999999999999999999999999999 887776666553
Q ss_pred -HhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 431 -SAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 431 -~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
...++..+|++.|+++++++|++..++
T Consensus 84 ~~~~~~~~~a~~~~~~al~~~P~~~~~~ 111 (176)
T 2r5s_A 84 LHQQAAESPELKRLEQELAANPDNFELA 111 (176)
T ss_dssp HHHHHTSCHHHHHHHHHHHHSTTCHHHH
T ss_pred HHhhcccchHHHHHHHHHHhCCCCHHHH
Confidence 344556678999999999999987654
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.8e-10 Score=106.93 Aligned_cols=151 Identities=13% Similarity=0.037 Sum_probs=119.1
Q ss_pred CCcCcCCccchhHHHHHHHhhhccCcchh-hhhhchhhhhhhHHHHHHhHHhhhHHHhhC-CHHHHHHHHHHHhhcCCCc
Q 012608 307 PLGEACSRRDLTAIHEILEKISYKDDEGV-ANELSFQMWTDQMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMV 384 (460)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~ 384 (460)
|+....-..+...+...++.+-.+..-.. +-+.......-...+..+|..++.++...| +++++++.++++|..+|.
T Consensus 43 ~~~~i~y~~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK- 121 (349)
T 3q7a_A 43 PVVPIMYSEEYKDAMDYFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK- 121 (349)
T ss_dssp CSSCBCCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-
T ss_pred CeeeeeeCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-
Confidence 33333444555555555554432222111 112222222333367888999999999999 599999999999999999
Q ss_pred cHHHHhhHHHHHHhc-C-ChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChH--------HHHHHHHHhhhhhhhcc
Q 012608 385 SPTVYARRSLCYLMS-D-MPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMEN--------EAQVALKEGTTLEAKKN 454 (460)
Q Consensus 385 ~~~~~~~~~~~~~~~-~-~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~--------~A~~~~~~al~l~~~~~ 454 (460)
+..+|+.|+.++..+ + +++++++.++++++++|.+..||++++.++..++.++ ++++++++++++||.|.
T Consensus 122 ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~ 201 (349)
T 3q7a_A 122 SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN 201 (349)
T ss_dssp CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH
Confidence 899999999999998 7 8999999999999999999999999999999999998 99999999999999999
Q ss_pred cccC
Q 012608 455 STAG 458 (460)
Q Consensus 455 ~a~~ 458 (460)
.||.
T Consensus 202 SAW~ 205 (349)
T 3q7a_A 202 SAWG 205 (349)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9985
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.15 E-value=1.9e-10 Score=115.97 Aligned_cols=109 Identities=13% Similarity=0.045 Sum_probs=102.1
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..+..+|..+...|+|++|++.|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++++|.
T Consensus 308 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 386 (537)
T 3fp2_A 308 EYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAE 386 (537)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 35678999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
++..+|++++|++.|+++++++|++..++.
T Consensus 387 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 416 (537)
T 3fp2_A 387 ILTDRGDFDTAIKQYDIAKRLEEVQEKIHV 416 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHCSSCSS
T ss_pred HHHHhCCHHHHHHHHHHHHHcCCcchhhHH
Confidence 999999999999999999999998876653
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.2e-10 Score=115.61 Aligned_cols=104 Identities=13% Similarity=-0.027 Sum_probs=54.1
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCC-------ccHHHHhhHHHHHHhc--CChHHHHHHHHHhhhhCCcchHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-------VSPTVYARRSLCYLMS--DMPQDALNDAMQAQIISPIWHIA 422 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-------~~~~~~~~~~~~~~~~--~~~~~A~~~~~~a~~l~p~~~~a 422 (460)
..|.++|.+++..|+|++|+.+|++++++.+. +.+.++.+.|.++... ++|++|+..|++|++++|+++.+
T Consensus 95 ~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~ 174 (472)
T 4g1t_A 95 VTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEF 174 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHH
Confidence 34455555555555555555555555544211 0334455555444433 24555555555555555555555
Q ss_pred HHHHHHHHH---hcCChHHHHHHHHHhhhhhhhccc
Q 012608 423 SYLQAAALS---AMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 423 ~~~~g~~~~---~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
++.+|.+++ ..+++++|++.|++|++++|++..
T Consensus 175 ~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~ 210 (472)
T 4g1t_A 175 TSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQY 210 (472)
T ss_dssp HHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHH
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchH
Confidence 555555533 234455555555555555555543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1e-10 Score=118.70 Aligned_cols=110 Identities=8% Similarity=-0.020 Sum_probs=103.0
Q ss_pred HHHHHHhHHhhhHHHhhC--CHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcC-ChHHHHHHHHHhhhhCCcchHHHH
Q 012608 348 MQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASY 424 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~l~p~~~~a~~ 424 (460)
..+..+|..+|.++.+.+ +|++|++.++++++++|. +..+|+.|+.+...+| .+++|++.++++|+++|++..||+
T Consensus 104 pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 104 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 367889999999999999 779999999999999999 8999999999999999 899999999999999999999999
Q ss_pred HHHHHHHhc--------------CChHHHHHHHHHhhhhhhhcccccC
Q 012608 425 LQAAALSAM--------------GMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 425 ~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
++|.++..+ +.+++|++++.+|+.++|++..||.
T Consensus 183 ~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~ 230 (567)
T 1dce_A 183 YRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 230 (567)
T ss_dssp HHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHH
T ss_pred HHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHH
Confidence 999999886 5689999999999999999999884
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.8e-10 Score=117.92 Aligned_cols=108 Identities=17% Similarity=0.129 Sum_probs=94.3
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 423 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~ 423 (460)
++..+...|..+.+.|++++|++.|+++++. +|+....+|..++.+|.+.|++++|+..++++++++|+++.+|
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 4667888899999999999999999999887 6662267888999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 424 YLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 424 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+.+|.+|..+|++++|++.|+++++++|++..++
T Consensus 554 ~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~ 587 (597)
T 2xpi_A 554 TAIALVYLHKKIPGLAITHLHESLAISPNEIMAS 587 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHH
Confidence 9999999999999999999999999999887654
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.12 E-value=1.4e-11 Score=115.43 Aligned_cols=184 Identities=13% Similarity=0.105 Sum_probs=122.6
Q ss_pred hcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCc--cceeeeEEeeCC---eeEEEEEcC
Q 012608 31 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNR--LTNLLGCCCEGD---ERLLVAEYM 104 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~--iv~~~~~~~~~~---~~~lv~e~~ 104 (460)
++.++.|.++.||+.. ..+++|+.... .....+.+|+.+++.+ .+.. ++.++.....++ ..|+||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4567889999998863 45889986432 2246789999999988 4433 455655543333 358999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK----------------------------------------- 143 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----------------------------------------- 143 (460)
+|.+|.+... ..++......++.+++..+..||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988875332 2466777778888888888888851
Q ss_pred ----------------CCcccccccCCcEEEcC--CCCeEEccCCCcccCCCCCCccCCCcc---cCcccccc-----CC
Q 012608 144 ----------------GRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGKSYSTNLAF---TPPEYLRT-----GR 197 (460)
Q Consensus 144 ----------------~~iiH~Dikp~Nill~~--~~~~kl~DFg~a~~~~~~~~~~~t~~y---~aPE~~~~-----~~ 197 (460)
..++|+|++|.||++++ ...+.|+||+.+............... ..|+.... +.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 01699999999999997 456789999987654332222111111 22322110 00
Q ss_pred ---------CCCCCceehHHHHHHHHhhCCCCCCCh
Q 012608 198 ---------VTPESVIYSFGTLLLDLLSGKHIPPSH 224 (460)
Q Consensus 198 ---------~~~~sDi~slG~~l~el~tg~~p~~~~ 224 (460)
.....+.|++|.+++.+.+|..++...
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~~ 290 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYEE 290 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 111257899999999999998665433
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.12 E-value=2.4e-10 Score=107.14 Aligned_cols=108 Identities=11% Similarity=-0.028 Sum_probs=82.9
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHH-HHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT-VYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
.....|...|..+.+.|++++|.+.|+++++++|. ++. +|.+.+.++.+.|++++|+..|++|++++|....+|...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a 175 (308)
T 2ond_A 97 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDI-DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAA 175 (308)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSS-CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 44567778888888888888888888888888887 554 7888888888888888888888888888888777776555
Q ss_pred HHHH-hcCChHHHHHHHHHhhhhhhhccccc
Q 012608 428 AALS-AMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 428 ~~~~-~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
...+ .+|++++|++.|++|++++|++..+|
T Consensus 176 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 206 (308)
T 2ond_A 176 LMEYYCSKDKSVAFKIFELGLKKYGDIPEYV 206 (308)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 5533 36888888888888888888776655
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.12 E-value=3.1e-10 Score=95.62 Aligned_cols=83 Identities=6% Similarity=-0.107 Sum_probs=78.3
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..+..+|.+++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|+++++++|++..+|+++|.
T Consensus 43 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l 121 (164)
T 3sz7_A 43 ANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGL 121 (164)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 46789999999999999999999999999999999 89999999999999999999999999999999999999999987
Q ss_pred HHHh
Q 012608 429 ALSA 432 (460)
Q Consensus 429 ~~~~ 432 (460)
+...
T Consensus 122 ~~~~ 125 (164)
T 3sz7_A 122 ETTK 125 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.11 E-value=4.1e-10 Score=102.97 Aligned_cols=105 Identities=12% Similarity=-0.025 Sum_probs=95.5
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc--------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhh----
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 415 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l---- 415 (460)
...+..+..+|..+...|+|++|++.|.+++++ +|. ...++.++|.+|...|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 456788999999999999999999999999988 466 7788999999999999999999999999999
Q ss_pred ----CCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 416 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 416 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
+|....+++++|.++..+|++++|+..|++++++.++.
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~ 202 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEK 202 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 88889999999999999999999999999999987654
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.6e-10 Score=86.52 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=70.4
Q ss_pred cCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 380 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 380 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++|.....+++++|.++...|++++|+..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++
T Consensus 3 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 3 MDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp ---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence 345436788999999999999999999999999999999999999999999999999999999999999999887654
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-10 Score=105.33 Aligned_cols=101 Identities=12% Similarity=-0.030 Sum_probs=94.4
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc--------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhh----
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 415 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l---- 415 (460)
...+..+..+|..++..|+|++|+..|++++++ +|. ...++.++|.+|...|++++|+..+++++++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999999999999987 355 6788999999999999999999999999998
Q ss_pred ----CCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhh
Q 012608 416 ----SPIWHIASYLQAAALSAMGMENEAQVALKEGTTL 449 (460)
Q Consensus 416 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 449 (460)
+|....+++++|.++..+|++++|+..|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6888999999999999999999999999999999
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.7e-10 Score=90.15 Aligned_cols=82 Identities=5% Similarity=-0.127 Sum_probs=74.6
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..++..+..+|..++..|+|++|+..|+++++++|+ ++.+++++|.++..+|++++|+..++++++++|+++.......
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 467889999999999999999999999999999999 8999999999999999999999999999999999988765443
Q ss_pred HHH
Q 012608 428 AAL 430 (460)
Q Consensus 428 ~~~ 430 (460)
.+.
T Consensus 103 ai~ 105 (117)
T 3k9i_A 103 AIL 105 (117)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=106.97 Aligned_cols=105 Identities=15% Similarity=0.115 Sum_probs=91.4
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc---
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~--- 419 (460)
..+..+..+|.++...|+|++|+.+|++|++. ++.....+++++|.+|..+|++++|+..+++|+++.+..
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcH
Confidence 34667999999999999999999999999952 222245689999999999999999999999999988655
Q ss_pred ---hHHHHHHHHHHHhcCC-hHHHHHHHHHhhhhhhhc
Q 012608 420 ---HIASYLQAAALSAMGM-ENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 420 ---~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~ 453 (460)
+.+|+++|.++..+|+ +++|+++|++|+.+....
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 8899999999999995 699999999999986543
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.11 E-value=4e-10 Score=90.06 Aligned_cols=88 Identities=10% Similarity=-0.014 Sum_probs=83.6
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..+..+|..+...|++++|++.|.++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 44 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~ 122 (131)
T 2vyi_A 44 ANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKI 122 (131)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHH
Confidence 35678999999999999999999999999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHhcCChH
Q 012608 429 ALSAMGMEN 437 (460)
Q Consensus 429 ~~~~~~~~~ 437 (460)
++..+|+++
T Consensus 123 ~~~~~~~~~ 131 (131)
T 2vyi_A 123 AELKLREAP 131 (131)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHhcCC
Confidence 999999863
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.7e-10 Score=114.32 Aligned_cols=91 Identities=13% Similarity=0.097 Sum_probs=84.0
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
+..+.++|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|++..++.++|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678999999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHH
Q 012608 431 SAMGMENEAQVA 442 (460)
Q Consensus 431 ~~~~~~~~A~~~ 442 (460)
..++++++|.+.
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.10 E-value=4e-10 Score=105.58 Aligned_cols=99 Identities=13% Similarity=-0.020 Sum_probs=90.3
Q ss_pred HhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHH-hcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHH
Q 012608 353 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYL-MSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 431 (460)
Q Consensus 353 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 431 (460)
.|...|..+.+.|++++|+..|++|++.+|. ...+|...+.... ..|++++|+..|+++++++|+++.+|.++|.++.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 8999999999999999999999999999998 7777776655533 3799999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHhhhh---hhh
Q 012608 432 AMGMENEAQVALKEGTTL---EAK 452 (460)
Q Consensus 432 ~~~~~~~A~~~~~~al~l---~~~ 452 (460)
.+|++++|+..|++|++. +|+
T Consensus 215 ~~g~~~~A~~~~~~al~~~~l~p~ 238 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTSGSLPPE 238 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCGG
T ss_pred HCCCHHHHHHHHHHHHhccCCCHH
Confidence 999999999999999995 564
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.09 E-value=2.3e-10 Score=99.71 Aligned_cols=97 Identities=7% Similarity=0.030 Sum_probs=84.4
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
...+.++|.+++..|+|++|+..|+++++++|+ +..+++++|.+|..+|++++|+..|+++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 578899999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHH-HHHHHhhh
Q 012608 431 SAMGMENEAQ-VALKEGTT 448 (460)
Q Consensus 431 ~~~~~~~~A~-~~~~~al~ 448 (460)
..+++++++. ..|.+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999888 44555443
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.08 E-value=5e-10 Score=104.09 Aligned_cols=104 Identities=14% Similarity=0.091 Sum_probs=91.1
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHh---hcCCCc---cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCc-----
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFI---DAGTMV---SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI----- 418 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al---~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~----- 418 (460)
.+..+...|..+...|+|++|+.+|++|+ +..|++ ...+++++|.+|..+|++++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~ 233 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHH
Confidence 46789999999999999999999999999 445552 1268999999999999999999999999998754
Q ss_pred -chHHHHHHHHHHHhcCChHHH-HHHHHHhhhhhhhc
Q 012608 419 -WHIASYLQAAALSAMGMENEA-QVALKEGTTLEAKK 453 (460)
Q Consensus 419 -~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~~~~ 453 (460)
.+.+|+++|.++..+|++++| ..+|++|+.+....
T Consensus 234 ~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 388999999999999999999 88899999886543
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.4e-10 Score=95.65 Aligned_cols=77 Identities=5% Similarity=-0.011 Sum_probs=70.6
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc-------CCCccHHHH----hhHHHHHHhcCChHHHHHHHHHhhhhCCc
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-------GTMVSPTVY----ARRSLCYLMSDMPQDALNDAMQAQIISPI 418 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-------~p~~~~~~~----~~~~~~~~~~~~~~~A~~~~~~a~~l~p~ 418 (460)
++..|.++|.++.+.|+|++|+.+|++||++ +|+ +..+| +++|.++..+|++++|+.+|++|++++|+
T Consensus 56 ~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 56 DAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 4569999999999999999999999999999 999 88999 99999999999999999999999999999
Q ss_pred chHHHHHHH
Q 012608 419 WHIASYLQA 427 (460)
Q Consensus 419 ~~~a~~~~g 427 (460)
+....-.+.
T Consensus 135 d~~~~~~~~ 143 (159)
T 2hr2_A 135 RKGETPGKE 143 (159)
T ss_dssp CCSCCTTHH
T ss_pred cHHHHHHHH
Confidence 866554443
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-10 Score=96.54 Aligned_cols=89 Identities=10% Similarity=0.012 Sum_probs=79.8
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcch-HHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-IASYLQA 427 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~-~a~~~~g 427 (460)
..+..+.++|.++++.|+|++|+..|++||+++|+ +..+|+++|.+|..+|++++|+.+|++|++++|+++ .+...++
T Consensus 61 ~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~ 139 (162)
T 3rkv_A 61 KNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMK 139 (162)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999999 899999999999999999999999999999999998 6677777
Q ss_pred HHHHhcCChHH
Q 012608 428 AALSAMGMENE 438 (460)
Q Consensus 428 ~~~~~~~~~~~ 438 (460)
.+...++++.+
T Consensus 140 ~~~~~~~~~~~ 150 (162)
T 3rkv_A 140 IVTERRAEKKA 150 (162)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 77766554443
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.6e-10 Score=92.25 Aligned_cols=71 Identities=14% Similarity=-0.028 Sum_probs=67.4
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 387 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
..++.+|.++...|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|++..++
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 88 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 88 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999987765
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.08 E-value=4.2e-10 Score=104.54 Aligned_cols=109 Identities=10% Similarity=-0.079 Sum_probs=98.1
Q ss_pred HHHHHhHHhhhHH----Hhh---CCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChH--HHHHHHHHhhhhCCcc
Q 012608 349 QETLNSKKKGDVA----FRQ---KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQ--DALNDAMQAQIISPIW 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~----~~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~a~~l~p~~ 419 (460)
.+..+|..++.++ ... ++++++++.++++++.+|. +..+|+.|+.+...++.++ ++++.+++++++||.+
T Consensus 101 k~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N 179 (306)
T 3dra_A 101 KNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN 179 (306)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC
Confidence 3455666666666 444 7899999999999999999 8999999999999999998 9999999999999999
Q ss_pred hHHHHHHHHHHHhcCC------hHHHHHHHHHhhhhhhhcccccC
Q 012608 420 HIASYLQAAALSAMGM------ENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 420 ~~a~~~~g~~~~~~~~------~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
..||.++|.++..+++ ++++++++++++.++|.+..||.
T Consensus 180 ~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~ 224 (306)
T 3dra_A 180 NSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWN 224 (306)
T ss_dssp HHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHH
Confidence 9999999999999998 99999999999999999999984
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.08 E-value=2e-10 Score=107.59 Aligned_cols=105 Identities=11% Similarity=0.005 Sum_probs=92.8
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc----
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---- 419 (460)
..+..+.++|.++.. |+|++|+++|++|+++.|.. ...++.++|.+|..+|++++|+..|++++++.|+.
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 457788999999988 99999999999999987652 25689999999999999999999999999997755
Q ss_pred --hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccc
Q 012608 420 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 420 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
..+++++|.++..+|++++|+.+|++++ ++|....
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 3588899999999999999999999999 9997654
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=7.6e-10 Score=102.86 Aligned_cols=104 Identities=11% Similarity=0.009 Sum_probs=94.9
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc--------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhh----
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII---- 415 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l---- 415 (460)
...+..+..+|..+...|++++|++.|+++++. +|. ...++.++|.+|...|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 456788999999999999999999999999988 666 7788999999999999999999999999974
Q ss_pred ---------------------------------------------CCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhh
Q 012608 416 ---------------------------------------------SPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 450 (460)
Q Consensus 416 ---------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 450 (460)
+|..+.+++++|.+|..+|++++|++.|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57788999999999999999999999999999998
Q ss_pred hh
Q 012608 451 AK 452 (460)
Q Consensus 451 ~~ 452 (460)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 75
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=3.6e-10 Score=105.71 Aligned_cols=110 Identities=8% Similarity=-0.013 Sum_probs=102.0
Q ss_pred HHHHHHhHHhhhHHHhhC--CHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCC-hHHHHHHHHHhhhhCCcchHHHH
Q 012608 348 MQETLNSKKKGDVAFRQK--DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASY 424 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~l~p~~~~a~~ 424 (460)
..+..+|..++.++...+ ++++++++++++++.+|. +..+|+.++.+....|. ++++++.++++|+++|.+..||+
T Consensus 105 PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~ 183 (331)
T 3dss_A 105 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 183 (331)
T ss_dssp TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 357788899999998888 599999999999999999 89999999999999999 59999999999999999999999
Q ss_pred HHHHHHHhc--------------CChHHHHHHHHHhhhhhhhcccccC
Q 012608 425 LQAAALSAM--------------GMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 425 ~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
++|.++..+ +.++++++++.+|+.++|++..||.
T Consensus 184 ~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 184 YRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp HHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999888 5689999999999999999999984
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.1e-10 Score=114.78 Aligned_cols=107 Identities=13% Similarity=0.020 Sum_probs=96.5
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHH------HHhhHHHHHHh---cCChHHHHHHHHHhhhhCCcch
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT------VYARRSLCYLM---SDMPQDALNDAMQAQIISPIWH 420 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~------~~~~~~~~~~~---~~~~~~A~~~~~~a~~l~p~~~ 420 (460)
+...+...|..+...|++++|+..|+++++.+|+ +.. ++.++|.++.. .|++++|+..++++++++|+++
T Consensus 371 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 449 (514)
T 2gw1_A 371 APEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSE 449 (514)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccH
Confidence 4567888999999999999999999999999888 543 88999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 421 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 421 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.+++.+|.++..+|++++|++.|+++++++|++..++
T Consensus 450 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 486 (514)
T 2gw1_A 450 QAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKL 486 (514)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHH
Confidence 9999999999999999999999999999999887654
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.06 E-value=3.9e-10 Score=87.75 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=66.7
Q ss_pred cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 385 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
+...+.++|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+++|++|++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 467889999999999999999999999999999999999999999999999999999999999999987
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=8.6e-10 Score=103.10 Aligned_cols=109 Identities=7% Similarity=-0.117 Sum_probs=97.4
Q ss_pred HHHHHhHHhhhHHHhhCC----------HHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCC--hHHHHHHHHHhhhhC
Q 012608 349 QETLNSKKKGDVAFRQKD----------LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAMQAQIIS 416 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~a~~l~ 416 (460)
.+..+|..++..+...+. +++++..+++++..+|. +..+|+.++.++..+++ +++++..++++++++
T Consensus 62 ~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~d 140 (331)
T 3dss_A 62 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEAD 140 (331)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhC
Confidence 556777778877766655 78999999999999999 89999999999999884 899999999999999
Q ss_pred CcchHHHHHHHHHHHhcCC-hHHHHHHHHHhhhhhhhcccccC
Q 012608 417 PIWHIASYLQAAALSAMGM-ENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 417 p~~~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
|.+..||+++|.++..+|. ++++++++++++++||.|..||.
T Consensus 141 prNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~ 183 (331)
T 3dss_A 141 ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWH 183 (331)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 9999999999999999998 59999999999999999999885
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.06 E-value=5.7e-10 Score=92.69 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=67.9
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc------h
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------H 420 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------~ 420 (460)
..+...|..++..|+|++|++.|++++++.+.. ...++.++|.++...|++++|+..+++++++.+.. +
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 366677777777777777777777777654331 13456677777777777777777777777665433 3
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 421 IASYLQAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 421 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
.+++++|.++..+|++++|++.|++++++..+
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 45667777777777777777777777766544
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.05 E-value=3.4e-10 Score=106.05 Aligned_cols=105 Identities=10% Similarity=-0.065 Sum_probs=93.7
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCC-----ccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc----
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---- 419 (460)
..+..+.+.|..+...|+|++|+.+|++|+++.+. ....++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 45778999999999999999999999999988532 134678999999999 99999999999999998764
Q ss_pred --hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 420 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 420 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
..++.++|.++..+|+|++|+.+|++++++.+++.
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 68899999999999999999999999999988764
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.05 E-value=8.4e-10 Score=88.35 Aligned_cols=84 Identities=12% Similarity=0.048 Sum_probs=78.8
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC------CcchHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------PIWHIA 422 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~------p~~~~a 422 (460)
.++..+..+|.+++..|+|++|+..|+++++++|+ +..+|+++|.++..+|++++|+..|+++++++ |++..+
T Consensus 36 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 36 EDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred CChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 45788999999999999999999999999999999 89999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhc
Q 012608 423 SYLQAAALSAM 433 (460)
Q Consensus 423 ~~~~g~~~~~~ 433 (460)
+..++.+...+
T Consensus 115 ~~~l~~~~~~l 125 (126)
T 3upv_A 115 DQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99988887654
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.03 E-value=2e-09 Score=99.90 Aligned_cols=103 Identities=9% Similarity=-0.051 Sum_probs=88.8
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----cHHHHhhHHHHHHhcCChHHHHHHHHHhh---hhCCcc--
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQ---IISPIW-- 419 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~---~l~p~~-- 419 (460)
....++..|..+...|+|++|+..|++|++..+.. ...+++++|.+|..+|++++|+..|++|+ +..|++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~ 193 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcccc
Confidence 34456778999999999999999999999875541 14589999999999999999999999999 555653
Q ss_pred --hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 420 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 420 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
..+++++|.+|..+|+|++|+.+|++|+++.++
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 369999999999999999999999999999865
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.03 E-value=9.3e-10 Score=105.77 Aligned_cols=94 Identities=14% Similarity=0.090 Sum_probs=89.4
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
...+..+.++|.++++.|+|++|+++|++|++++|+ +..+++++|.+|..+|++++|+.+|++|++++|++..++..++
T Consensus 270 ~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~ 348 (370)
T 1ihg_A 270 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELL 348 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356789999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHH
Q 012608 428 AALSAMGMENEAQVA 442 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~ 442 (460)
.++..++++++|.+.
T Consensus 349 ~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 349 KVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988765
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.03 E-value=5.9e-10 Score=101.35 Aligned_cols=107 Identities=13% Similarity=-0.035 Sum_probs=93.9
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCC-ccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC--Cc-chHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-VSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS--PI-WHIASY 424 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~--p~-~~~a~~ 424 (460)
... ..+.+|..+++.|+|++|+..|++++...+. ....+++++|.++..+|++++|+..|++++.-. |. .+++++
T Consensus 134 ~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~ 212 (282)
T 4f3v_A 134 EHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAW 212 (282)
T ss_dssp HHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHH
T ss_pred chH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 445 8899999999999999999999999876422 124589999999999999999999999998655 66 778999
Q ss_pred HHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 425 LQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 425 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++|.++..+|+.++|...|++++..+|+ ..++
T Consensus 213 ~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~ 244 (282)
T 4f3v_A 213 YLAMARRSQGNESAAVALLEWLQTTHPE-PKVA 244 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHH
Confidence 9999999999999999999999999998 5543
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.03 E-value=8.5e-10 Score=112.88 Aligned_cols=101 Identities=9% Similarity=-0.165 Sum_probs=64.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
...|..+|..+.+.|++++|++.|+++++.+|+ +..+|..++.+|...|++++|++.|+++++++|+++.+|+.+|.++
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 485 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVA 485 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 445666666666666666666666666666666 5566666666666666666666666666666666666666666666
Q ss_pred HhcCChHHHHHHHHHhhhhhhh
Q 012608 431 SAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~ 452 (460)
...|++++|++.|++++++.|+
T Consensus 486 ~~~g~~~~A~~~~~~~~~~~~~ 507 (597)
T 2xpi_A 486 FNKSDMQTAINHFQNALLLVKK 507 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhhhc
Confidence 6666666666666666666443
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.3e-09 Score=101.22 Aligned_cols=102 Identities=13% Similarity=-0.030 Sum_probs=94.0
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc--------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC--
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS-- 416 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~-- 416 (460)
....+..+..+|..+...|++++|+..|.+++++ +|. ...++.++|.+|...|++++|+..+++++++.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999999999999987 355 67889999999999999999999999999884
Q ss_pred ------CcchHHHHHHHHHHHhcCChHHHHHHHHHhhhh
Q 012608 417 ------PIWHIASYLQAAALSAMGMENEAQVALKEGTTL 449 (460)
Q Consensus 417 ------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 449 (460)
|....+++++|.++..+|++++|++.|++++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999998
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=1.2e-09 Score=102.65 Aligned_cols=98 Identities=11% Similarity=-0.027 Sum_probs=90.9
Q ss_pred HHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcC-ChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhc-C-Ch
Q 012608 360 VAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-MPQDALNDAMQAQIISPIWHIASYLQAAALSAM-G-ME 436 (460)
Q Consensus 360 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~-~-~~ 436 (460)
...+.+..++|++.++++|++||+ +.++|+.|+.++..++ .+++++..+++++.++|++..+|+.++.++..+ + ++
T Consensus 63 ~~~~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~ 141 (349)
T 3q7a_A 63 IAAKEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDP 141 (349)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCC
T ss_pred HHHhCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCCh
Confidence 344455668999999999999999 8999999999999999 599999999999999999999999999999998 8 99
Q ss_pred HHHHHHHHHhhhhhhhcccccC
Q 012608 437 NEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 437 ~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+++++.+++++++||++..||.
T Consensus 142 ~~EL~~~~k~L~~dpkNy~AW~ 163 (349)
T 3q7a_A 142 VSEIEYIHGSLLPDPKNYHTWA 163 (349)
T ss_dssp HHHHHHHHHHTSSCTTCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999985
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.02 E-value=3.4e-10 Score=93.14 Aligned_cols=72 Identities=14% Similarity=-0.044 Sum_probs=66.3
Q ss_pred HHHHHHhHHhhhHHHhhCCH----------HHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcC-----------ChHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDL----------KDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----------MPQDAL 406 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-----------~~~~A~ 406 (460)
..++..|.+.|.++.+.+++ ++|+..|++||+++|+ ...+|+++|.+|..+| ++++|+
T Consensus 33 P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~ 111 (158)
T 1zu2_A 33 PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLAT 111 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccHHHHH
Confidence 35788999999999998876 4999999999999999 8999999999999875 899999
Q ss_pred HHHHHhhhhCCcch
Q 012608 407 NDAMQAQIISPIWH 420 (460)
Q Consensus 407 ~~~~~a~~l~p~~~ 420 (460)
..|++|++++|++.
T Consensus 112 ~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 112 QFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHCTTCH
T ss_pred HHHHHHHHhCCCCH
Confidence 99999999999985
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.02 E-value=9.4e-10 Score=106.27 Aligned_cols=107 Identities=15% Similarity=0.083 Sum_probs=95.5
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----cHHHHhhHHHHHHhcCChHHHHHHHHHhhh-----hC
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQI-----IS 416 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-----l~ 416 (460)
....+..+..+|..+...|+|++|++.|++|+++.+.. ...++.++|.+|..+|++++|+..+++|++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 34567789999999999999999999999999885541 235899999999999999999999999999 46
Q ss_pred -CcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 417 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 417 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
|..+.+++++|.++..+|++++|++.|++|+++.++.
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 297 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA 297 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 8899999999999999999999999999999996553
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.02 E-value=6e-10 Score=86.47 Aligned_cols=77 Identities=10% Similarity=-0.015 Sum_probs=71.9
Q ss_pred cCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhh--ccccc
Q 012608 380 AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK--KNSTA 457 (460)
Q Consensus 380 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~--~~~a~ 457 (460)
++|+ +..++..+|.++...|++++|+..++++++++|+++.+++++|.++..+|++++|++.|+++++++|+ +..++
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 4688 78899999999999999999999999999999999999999999999999999999999999999998 65443
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.01 E-value=7.6e-10 Score=84.88 Aligned_cols=83 Identities=10% Similarity=0.076 Sum_probs=71.4
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHH--HHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS--YLQ 426 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~--~~~ 426 (460)
.++..++.+|..++..|+|++|+..|+++++++|+ +..+|+++|.+|..+|++++|+..|++++++.|+..+.+ ..+
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l 83 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSEL 83 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHH
Confidence 35678999999999999999999999999999999 889999999999999999999999999999988654443 334
Q ss_pred HHHHHh
Q 012608 427 AAALSA 432 (460)
Q Consensus 427 g~~~~~ 432 (460)
..++..
T Consensus 84 ~~~l~~ 89 (100)
T 3ma5_A 84 QDAKLK 89 (100)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-09 Score=106.49 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=95.5
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccH----HHHhhHHHHHHhcCChHHHHHHHHHhhhh------CCc
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSP----TVYARRSLCYLMSDMPQDALNDAMQAQII------SPI 418 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------~p~ 418 (460)
..+..+..+|..++..|+|++|+..|+++++++|+ +. .++.++|.+|...|++++|+..+++++++ +|.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 124 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLG 124 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchH
Confidence 56778889999999999999999999999999999 54 57999999999999999999999999999 788
Q ss_pred chHHHHHHHHHHHhcCChHHHHHHHHHhhhhhh
Q 012608 419 WHIASYLQAAALSAMGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 419 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 451 (460)
.+.+++++|.++..+|++++|+..|++++++.+
T Consensus 125 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 157 (411)
T 4a1s_A 125 EAKSSGNLGNTLKVMGRFDEAAICCERHLTLAR 157 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999944
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.1e-09 Score=95.23 Aligned_cols=109 Identities=11% Similarity=-0.072 Sum_probs=85.3
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc---CCC---ccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc-
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA---GTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW- 419 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~- 419 (460)
....+..+..+|..+...|+|++|++.|.+++++ .++ ....++.++|.++...|++++|+..+++++++.+..
T Consensus 62 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 62 HTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 3456778888899999999999999999998887 332 135668888888888999999999999888764322
Q ss_pred -----hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccc
Q 012608 420 -----HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 420 -----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
+.++.++|.++..+|++++|++.|++|+++-.+...
T Consensus 142 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 182 (203)
T 3gw4_A 142 DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED 182 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 344678888999999999999999999888766543
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.01 E-value=1e-09 Score=101.94 Aligned_cols=104 Identities=10% Similarity=-0.019 Sum_probs=88.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-c----HHHHhhHHHHHHhcCChHHHHHHHHHhhh-------hCCc
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-S----PTVYARRSLCYLMSDMPQDALNDAMQAQI-------ISPI 418 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-------l~p~ 418 (460)
...+...|..+...|+|++|+.+|++|+++.+.. + ..+++++|.+|..+|++++|+..|++|++ ..+.
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 194 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH
Confidence 3345568999999999999999999999965441 1 23699999999999999999999999994 3345
Q ss_pred chHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 419 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 419 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
.+.+++++|.+|..+|+|++|+++|++|+++.++..
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~ 230 (293)
T 3u3w_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRIN 230 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcC
Confidence 577999999999999999999999999999987763
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.01 E-value=5.9e-10 Score=85.04 Aligned_cols=69 Identities=14% Similarity=0.080 Sum_probs=65.4
Q ss_pred HhhHHHHHHhcCChHHHHHHHHHhhhhCCcchH-HHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 389 YARRSLCYLMSDMPQDALNDAMQAQIISPIWHI-ASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 389 ~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.+++|.++...|++++|+..|+++++++|+++. +|+++|.++..+|++++|+++|+++++++|++..++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 356889999999999999999999999999999 999999999999999999999999999999988765
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=2.4e-09 Score=99.20 Aligned_cols=98 Identities=9% Similarity=-0.029 Sum_probs=92.1
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc--hHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--HIASYLQA 427 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~--~~a~~~~g 427 (460)
........+..+.+.+++++|++.|+++++.+|+ +..+++++|.++...|++++|+..|.++++++|++ ..++.++|
T Consensus 184 ~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~ 262 (287)
T 3qou_A 184 TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQ 262 (287)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHH
Confidence 4456667777888999999999999999999999 89999999999999999999999999999999999 99999999
Q ss_pred HHHHhcCChHHHHHHHHHhhh
Q 012608 428 AALSAMGMENEAQVALKEGTT 448 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~ 448 (460)
.++..+|+.++|+..|++++.
T Consensus 263 ~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 263 EILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcHHHHHHHHHH
Confidence 999999999999999999985
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.1e-09 Score=100.59 Aligned_cols=105 Identities=16% Similarity=0.147 Sum_probs=95.7
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc---HHHHhhHHHHHHhcCChHHHHHHHHHhhhh------CCcch
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWH 420 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------~p~~~ 420 (460)
....+...|..++..|+|++|+..|+++++.+|++. ..++..+|.++...|++++|+..+++++++ .|..+
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 456788999999999999999999999999999932 467889999999999999999999999988 66778
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 421 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 421 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
.+++.+|.++..+|++++|+..|++++++.++..
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 117 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 117 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999987653
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.9e-09 Score=97.53 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=88.3
Q ss_pred HHHHHHhHHhhhHHHh----hCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCCcc
Q 012608 348 MQETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIW 419 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~ 419 (460)
..++.++..+|..+.. .+++++|+..|+++++.+ ++.+++++|.+|.. .+++++|+..|++|++++ +
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--Y 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--C
Confidence 3567788999999999 999999999999999885 57888899999999 999999999999999884 8
Q ss_pred hHHHHHHHHHHHh----cCChHHHHHHHHHhhhhhh
Q 012608 420 HIASYLQAAALSA----MGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 420 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 451 (460)
+.+++++|.+|.. .+++++|++.|++|+++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 8999999999999 9999999999999998864
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.2e-09 Score=88.47 Aligned_cols=78 Identities=10% Similarity=0.014 Sum_probs=71.6
Q ss_pred hcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 379 DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 379 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
..+|. .+..+..+|.++...|++++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHH
Confidence 35667 7889999999999999999999999999999999999999999999999999999999999999999987654
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.7e-09 Score=104.25 Aligned_cols=104 Identities=12% Similarity=-0.012 Sum_probs=94.6
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCC-----CccHHHHhhHHHHHHhcCChHHHHHHHHHhhh-----hCCc
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-----MVSPTVYARRSLCYLMSDMPQDALNDAMQAQI-----ISPI 418 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-----l~p~ 418 (460)
..+..+...|..+...|+|++|++.|.+|+++.+ .....++.++|.+|..+|++++|+..+++|++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 5678899999999999999999999999998632 22456899999999999999999999999999 8899
Q ss_pred chHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 419 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 419 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
.+.+++++|.++..+|++++|+..|++|+++.++
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998654
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=90.17 Aligned_cols=106 Identities=8% Similarity=0.038 Sum_probs=94.3
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCC-----ccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc---
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW--- 419 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~--- 419 (460)
...+..+..+|..++..|+|++|+..|.+++++.+. ....++.++|.++...|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 356788999999999999999999999999987443 257889999999999999999999999999987653
Q ss_pred ---hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 420 ---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 420 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
..+++++|.++..+|++++|++.|++++++.+..
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 122 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 122 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 7789999999999999999999999999986543
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.97 E-value=6.3e-10 Score=102.81 Aligned_cols=103 Identities=6% Similarity=-0.006 Sum_probs=88.9
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchH-----HH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHI-----AS 423 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~-----a~ 423 (460)
.++..+.++|..+++.|+|++|+..|++|++++|+ +..+++++|.+|..+|++++|+..|+++++++|+++. ++
T Consensus 36 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~ 114 (281)
T 2c2l_A 36 LVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIP 114 (281)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHH
Confidence 46788999999999999999999999999999999 8999999999999999999999999999999997631 11
Q ss_pred --------------------------HHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 424 --------------------------YLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 424 --------------------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
..+|. ...|++++|++.|++|++++|++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~--l~~~~~~~A~~~~~~al~~~p~~~ 169 (281)
T 2c2l_A 115 SALRIAKKKRWNSIEERRIHQESELHSYLTR--LIAAERERELEECQRNHEGHEDDG 169 (281)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCCHHHHHHHH--HHHHHHHHHHTTTSGGGTTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHHHHHHHHHHHhhhccccchh
Confidence 11222 236899999999999999999764
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-09 Score=105.03 Aligned_cols=105 Identities=10% Similarity=-0.044 Sum_probs=92.8
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc------cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc-
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW- 419 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~- 419 (460)
....+..+..+|..++..|++++|+.+|.+|+++.+.. ...++.++|.+|..+|++++|+..+++|+++.|..
T Consensus 139 ~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 218 (383)
T 3ulq_A 139 RIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK 218 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 34578899999999999999999999999999884431 34689999999999999999999999999986654
Q ss_pred -----hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhh
Q 012608 420 -----HIASYLQAAALSAMGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 420 -----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 451 (460)
+.+++++|.++..+|++++|+++|++|+++.+
T Consensus 219 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 255 (383)
T 3ulq_A 219 QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFE 255 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 36999999999999999999999999999643
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.3e-09 Score=103.61 Aligned_cols=105 Identities=16% Similarity=0.147 Sum_probs=95.5
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc---HHHHhhHHHHHHhcCChHHHHHHHHHhhhh------CCcch
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWH 420 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------~p~~~ 420 (460)
.+..+...|..++..|+|++|+..|+++++++|.+. ..++..+|.++...|++++|+..+++++++ .|..+
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 87 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 87 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHH
Confidence 356788999999999999999999999999999832 367999999999999999999999999988 56778
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 421 IASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 421 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
.+++++|.++..+|++++|+..|++|+++.++..
T Consensus 88 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 121 (406)
T 3sf4_A 88 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 121 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999988753
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=108.45 Aligned_cols=105 Identities=12% Similarity=0.056 Sum_probs=88.8
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhc-------------------CChHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS-------------------DMPQDALNDA 409 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-------------------~~~~~A~~~~ 409 (460)
..+..+..+|..+...|++++|++.|.+|++.+|+ +..++.++|.+|... +.++.|+..+
T Consensus 245 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 323 (472)
T 4g1t_A 245 GVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHL 323 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHH
Confidence 44667888999999999999999999999999999 888888888887543 3467788888
Q ss_pred HHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 410 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 410 ~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
+++++++|+++.+++++|.++..+|++++|+++|++|++++++..
T Consensus 324 ~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~ 368 (472)
T 4g1t_A 324 KKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPV 368 (472)
T ss_dssp HHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHH
T ss_pred HHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCCh
Confidence 888888888888888889888888999999999988888876553
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=9.6e-09 Score=84.07 Aligned_cols=81 Identities=11% Similarity=0.047 Sum_probs=76.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
...+..+|..++..|+|++|+..|+++++.+|+ +..+++++|.++..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 788999999999999999999999999999999 8999999999999999999999999999999999999999888775
Q ss_pred Hh
Q 012608 431 SA 432 (460)
Q Consensus 431 ~~ 432 (460)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 44
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.94 E-value=1.7e-09 Score=87.99 Aligned_cols=92 Identities=12% Similarity=0.009 Sum_probs=83.2
Q ss_pred CCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcC---ChHHHHHHHHHhhhhC-C-cchHHHHHHHHHHHhcCChHHH
Q 012608 365 KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMENEA 439 (460)
Q Consensus 365 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~l~-p-~~~~a~~~~g~~~~~~~~~~~A 439 (460)
+..+.+.+.|.+.++.+|. +....++.|.|+.+.+ +.++|+..++..++.+ | +..+++|++|.+++++|+|++|
T Consensus 12 ~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 4557788889999988887 8899999999999988 6779999999999999 8 6799999999999999999999
Q ss_pred HHHHHHhhhhhhhccccc
Q 012608 440 QVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 440 ~~~~~~al~l~~~~~~a~ 457 (460)
+++++++|+++|++..|.
T Consensus 91 ~~y~~~lL~ieP~n~QA~ 108 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNNQAK 108 (152)
T ss_dssp HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhcCCCCHHHH
Confidence 999999999999998764
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.92 E-value=8.1e-09 Score=81.48 Aligned_cols=84 Identities=17% Similarity=0.163 Sum_probs=79.3
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
+...+...|..+...|++++|+..|+++++.+|. +...+.++|.++...|++++|+..++++++++|+++.++.++|.+
T Consensus 42 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 120 (125)
T 1na0_A 42 NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 120 (125)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4667899999999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHhcC
Q 012608 430 LSAMG 434 (460)
Q Consensus 430 ~~~~~ 434 (460)
+..+|
T Consensus 121 ~~~~g 125 (125)
T 1na0_A 121 KQKQG 125 (125)
T ss_dssp HHHHC
T ss_pred HHhcc
Confidence 87764
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.91 E-value=9e-09 Score=80.38 Aligned_cols=82 Identities=9% Similarity=-0.059 Sum_probs=77.1
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..+...|..++..|+|++|+..|+++++.+|+ +..++.++|.++...|++++|+..++++++++|+++.++..++.
T Consensus 36 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 114 (118)
T 1elw_A 36 HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQN 114 (118)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 35778999999999999999999999999999999 89999999999999999999999999999999999999999987
Q ss_pred HHH
Q 012608 429 ALS 431 (460)
Q Consensus 429 ~~~ 431 (460)
+..
T Consensus 115 ~~~ 117 (118)
T 1elw_A 115 MEA 117 (118)
T ss_dssp HHH
T ss_pred hhc
Confidence 753
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.89 E-value=7.5e-09 Score=94.76 Aligned_cols=102 Identities=20% Similarity=0.126 Sum_probs=91.5
Q ss_pred HHHHhHHhhhHHHh----hCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCCcchH
Q 012608 350 ETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHI 421 (460)
Q Consensus 350 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~ 421 (460)
++..+..+|..+.. .+++++|+..|+++++.+ +..+++++|.+|.. .+++++|+..|+++++++| +.
T Consensus 145 ~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~ 219 (273)
T 1ouv_A 145 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GG 219 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HH
T ss_pred cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HH
Confidence 46678889999998 899999999999999884 46788999999999 9999999999999999976 88
Q ss_pred HHHHHHHHHHh----cCChHHHHHHHHHhhhhhhhcccc
Q 012608 422 ASYLQAAALSA----MGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 422 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+++++|.+|.. .+++++|++.|++|++++|++...
T Consensus 220 a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~ 258 (273)
T 1ouv_A 220 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACD 258 (273)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHHHHH
Confidence 99999999999 999999999999999999887543
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.87 E-value=8e-09 Score=77.72 Aligned_cols=71 Identities=14% Similarity=-0.096 Sum_probs=65.6
Q ss_pred CCCccHHHHhhHHHHHHhcCC---hHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 381 GTMVSPTVYARRSLCYLMSDM---PQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 381 ~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
+|+ ++.++..+|.+++..++ .++|...+++|++++|+++.+++.+|.+++..|+|++|+..|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 577 88999999999976655 689999999999999999999999999999999999999999999999998
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.86 E-value=7.1e-09 Score=89.98 Aligned_cols=104 Identities=11% Similarity=0.028 Sum_probs=95.2
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhh------cCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhh------C
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFID------AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQII------S 416 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------~ 416 (460)
..+..+..+|..+...|+|++|+..|+++++ ..|. ...++.++|.+|...|++++|+..+++++++ +
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 4577899999999999999999999999999 8999 8899999999999999999999999999998 3
Q ss_pred C-cchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 417 P-IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 417 p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
| ....+++++|.++..+|++++|+..|++++++.+..
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 140 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA 140 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 3 457789999999999999999999999999886543
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.85 E-value=9.6e-09 Score=101.85 Aligned_cols=109 Identities=8% Similarity=-0.057 Sum_probs=92.4
Q ss_pred hhhhhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc-----CCCc--cHHHHhhHHHHHHhcCChHHHHHHHHHhhhh
Q 012608 343 MWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII 415 (460)
Q Consensus 343 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l 415 (460)
.+....+.+....+.+..+..+|+|++|+..|.+++++ .|++ ....++++|.+|..+|+|++|+..+++++++
T Consensus 301 ~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i 380 (490)
T 3n71_A 301 VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDG 380 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 34445566777788888899999999999999999965 2331 5678999999999999999999999999977
Q ss_pred C--------CcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhh
Q 012608 416 S--------PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 416 ~--------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 451 (460)
. |+-+..++++|.+|..+|+|++|+..|++|+++-.
T Consensus 381 ~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~ 424 (490)
T 3n71_A 381 YMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILL 424 (490)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3 45577899999999999999999999999998743
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.85 E-value=6e-09 Score=81.86 Aligned_cols=82 Identities=7% Similarity=-0.089 Sum_probs=70.9
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcch--HHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH--IASYLQA 427 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~--~a~~~~g 427 (460)
++..+..+|..++..|+|++|+..|+++++++|+ ...+|+++|.+|..+|++++|+..|+++++++|+.. .+...+.
T Consensus 18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~ 96 (115)
T 2kat_A 18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKELQ 96 (115)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHHHH
Confidence 4678899999999999999999999999999999 899999999999999999999999999999998654 3344444
Q ss_pred HHHHh
Q 012608 428 AALSA 432 (460)
Q Consensus 428 ~~~~~ 432 (460)
..+..
T Consensus 97 ~~l~~ 101 (115)
T 2kat_A 97 VFLRR 101 (115)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.84 E-value=6.2e-09 Score=100.58 Aligned_cols=104 Identities=9% Similarity=0.043 Sum_probs=67.0
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc-----
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW----- 419 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~----- 419 (460)
.+..+..+|..+...|+|++|+..|++++++.|.. ...++.++|.+|...|++++|+..+++++++.|+.
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 265 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 265 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchH
Confidence 44566666777777777777777777776654431 11256666667777777777777777776666554
Q ss_pred -hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 420 -HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 420 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
+.+++++|.++..+|++++|+..|++|+++.++.
T Consensus 266 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 300 (406)
T 3sf4_A 266 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL 300 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 5666666777777777777777777776665543
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.84 E-value=5.7e-09 Score=101.40 Aligned_cols=103 Identities=10% Similarity=0.015 Sum_probs=70.9
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHH------HHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc----
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPT------VYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 419 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~------~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---- 419 (460)
.+..+..+|..++..|+|++|+.+|++++++.|. ... ++.++|.+|...|++++|+..+++++++.|..
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 300 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGERE 300 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHH
Confidence 4456667777777777777777777777766554 222 66677777777777777777777777776643
Q ss_pred --hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 420 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 420 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
..+++.+|.++..+|++++|++.|++++++.++.
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 336 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL 336 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC
Confidence 5667777777777777777777777777765544
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.83 E-value=2.1e-08 Score=80.08 Aligned_cols=83 Identities=11% Similarity=-0.044 Sum_probs=74.0
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc---HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS---PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
..++.+|..++..|+|++|+..|+++++.+|+ + +.+++++|.++..+|++++|+..|+++++.+|+++.+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 68899999999999999999999999999999 7 7889999999999999999999999999999999888776666
Q ss_pred HHHhcCC
Q 012608 429 ALSAMGM 435 (460)
Q Consensus 429 ~~~~~~~ 435 (460)
+....++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 5554443
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.2e-08 Score=89.84 Aligned_cols=101 Identities=13% Similarity=-0.010 Sum_probs=78.1
Q ss_pred HHHHHhHHhhhHHHhhC----CHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCC--c
Q 012608 349 QETLNSKKKGDVAFRQK----DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISP--I 418 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p--~ 418 (460)
.++.+++.+|..+.. + ++++|+.+|.+|++. . ++.+++++|.+|.. .+++++|+..|++|++..| +
T Consensus 48 g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~ 123 (212)
T 3rjv_A 48 GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--G-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA 123 (212)
T ss_dssp TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHH
T ss_pred CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcc
Confidence 456777888888777 6 788888888888553 4 56778888888876 7788888888888888887 4
Q ss_pred chHHHHHHHHHHHh----cCChHHHHHHHHHhhhhhhhcc
Q 012608 419 WHIASYLQAAALSA----MGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 419 ~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~~ 454 (460)
++.+++++|.+|.. .+++++|+..|++|+++ +.+.
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~ 162 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTG 162 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTT
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCH
Confidence 68888888888888 77888888888888877 4443
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.80 E-value=2.9e-08 Score=76.58 Aligned_cols=78 Identities=14% Similarity=-0.027 Sum_probs=70.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcC-------CCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAG-------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIAS 423 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~ 423 (460)
+...+.+|..++..|+|..|+..|++|++.. +. ...++.++|.|+.++|+++.|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5678899999999999999999999999863 23 678899999999999999999999999999999999999
Q ss_pred HHHHHH
Q 012608 424 YLQAAA 429 (460)
Q Consensus 424 ~~~g~~ 429 (460)
.+++..
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 998743
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.5e-08 Score=87.85 Aligned_cols=104 Identities=11% Similarity=-0.035 Sum_probs=92.7
Q ss_pred HHHHHhHHhhhHHHh----hCCHHHHHHHHHHHhhcCCC-ccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCCcc
Q 012608 349 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTM-VSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIW 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~ 419 (460)
.++.+++++|..+.. .+++++|+++|++|++.+|. +.+.+++++|.+|.. .+++++|+..|++|+++ |.+
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 457788999999988 89999999999999999983 158899999999999 88999999999999999 788
Q ss_pred hHHHHHHHHHHHhc-C-----ChHHHHHHHHHhhhhhhhc
Q 012608 420 HIASYLQAAALSAM-G-----MENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 420 ~~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~~~~ 453 (460)
+.+++++|.+|... | ++++|+..|++|++.....
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~ 201 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDT 201 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHH
Confidence 89999999999764 3 8999999999999886544
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.7e-08 Score=97.32 Aligned_cols=105 Identities=12% Similarity=-0.013 Sum_probs=72.3
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCC------ccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCC-----
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTM------VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISP----- 417 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p----- 417 (460)
..+..+..+|..++..|++++|+.+|.+|+++.+. ....++.++|.+|..+|++++|+..|++|+++.+
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 218 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQND 218 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCH
Confidence 45667777777777777777777777777765332 1234567777777777777777777777777633
Q ss_pred -cchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 418 -IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 418 -~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
..+.+++++|.++..+|++++|+++|++|+++....
T Consensus 219 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 219 RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence 234567777777777777777777777777765544
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=95.58 Aligned_cols=102 Identities=9% Similarity=0.045 Sum_probs=60.1
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc------
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW------ 419 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~------ 419 (460)
+..+...|..++..|++++|+..|++++++.+.. ...++.++|.++...|++++|+..+++++++.|+.
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 262 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 262 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHH
Confidence 4455666666666666666666666666554330 11255666666666666666666666666655544
Q ss_pred hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 420 HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 420 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
..+++.+|.++..+|++++|+..|++|+++.+.
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 555666666666666666666666666665544
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.76 E-value=5.2e-08 Score=91.35 Aligned_cols=74 Identities=14% Similarity=0.107 Sum_probs=62.8
Q ss_pred hcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 379 DAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 379 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
..+|. ++.+|..++..+...|++++|+..+++|+.++|+ +.+|..+|.++...|++++|++.|++|+.++|...
T Consensus 271 ~~~~~-~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 271 PELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp GGGTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred ccCCc-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 44455 5555555666667789999999999999999985 67889999999999999999999999999999764
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=3.6e-08 Score=96.12 Aligned_cols=99 Identities=11% Similarity=-0.088 Sum_probs=82.3
Q ss_pred HhHHhhhHHHhhCCHHHHHHHHHHHhhc-----CCCc--cHHHHhhHHHHHHhcCChHHHHHHHHHhhhh--------CC
Q 012608 353 NSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQII--------SP 417 (460)
Q Consensus 353 ~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l--------~p 417 (460)
...+.+......|+|++|+..|++++++ .|++ ....+.++|.+|..+|+|++|+..+++++++ .|
T Consensus 300 ~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 300 NVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 3344444455678999999999999964 3442 4567999999999999999999999999977 35
Q ss_pred cchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhh
Q 012608 418 IWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 418 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 451 (460)
+-+..++++|.+|..+|+|++|+..|++|+++-.
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 5577899999999999999999999999998753
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=8.9e-08 Score=87.71 Aligned_cols=130 Identities=16% Similarity=0.057 Sum_probs=92.4
Q ss_pred CCCCC-eEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEEEcCCCCCHHhh
Q 012608 36 EKAPN-VVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVAEYMPNETLAKH 112 (460)
Q Consensus 36 ~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~ 112 (460)
.|..| .||+.... ++..+++|+-... ....+.+|+.+|+.+. +-.++++++++..++..++|||+++|.++.+.
T Consensus 34 ~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 34 VGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp CSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred CCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence 34444 68988744 5678999986432 2567889999999883 44588999999999999999999999888765
Q ss_pred hhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------
Q 012608 113 LFHWETHPMKWAMRLRVVLHLAQALEYCTSKG------------------------------------------------ 144 (460)
Q Consensus 113 ~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~------------------------------------------------ 144 (460)
... .......+..++...|..||+..
T Consensus 111 ~~~------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 184 (272)
T 4gkh_A 111 LEE------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMH 184 (272)
T ss_dssp HHH------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHH
T ss_pred ccC------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHH
Confidence 431 11122334445555555555310
Q ss_pred ---------CcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 145 ---------RALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 145 ---------~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
.++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 185 ~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 185 KLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 058999999999999877777999997653
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=5.8e-08 Score=90.65 Aligned_cols=134 Identities=13% Similarity=0.056 Sum_probs=92.5
Q ss_pred hcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCC---ccceeeeEEe-eCCeeEEEEEcCCC
Q 012608 31 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNN---RLTNLLGCCC-EGDERLLVAEYMPN 106 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---~iv~~~~~~~-~~~~~~lv~e~~~g 106 (460)
+..++.|....||+. |..+++|+.... .....+.+|+.+|+.+.+. .+++++.++. ..+..++|||+++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKSQ--QGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCCc--hHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456778888899988 567888985321 1246789999999999642 3677777764 34567899999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG------------------------------------------ 144 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~------------------------------------------ 144 (460)
.+|.+... ..++......+..++...|..||+..
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88876321 12344444455555555555555321
Q ss_pred -----------------CcccccccCCcEEEcC---CCCe-EEccCCCccc
Q 012608 145 -----------------RALYHDLNAYRILFDE---DGNP-RLSTFGLMKN 174 (460)
Q Consensus 145 -----------------~iiH~Dikp~Nill~~---~~~~-kl~DFg~a~~ 174 (460)
.++|+|++|.||+++. ++.+ .|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1589999999999987 4554 7999997654
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.67 E-value=7.2e-08 Score=97.35 Aligned_cols=98 Identities=14% Similarity=0.013 Sum_probs=56.9
Q ss_pred HhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHH-HHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHH
Q 012608 353 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC-YLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 431 (460)
Q Consensus 353 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 431 (460)
.|...|..+.+.|++++|.+.|++|++..|. ....+...+.. +...|++++|...|+++++++|+++.+|..+|.++.
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 4555555555555555555555555555554 33333333222 334566666666666666666666666666666666
Q ss_pred hcCChHHHHHHHHHhhhhhh
Q 012608 432 AMGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 432 ~~~~~~~A~~~~~~al~l~~ 451 (460)
.+|++++|...|++|++.+|
T Consensus 437 ~~g~~~~Ar~~~~~al~~~~ 456 (530)
T 2ooe_A 437 HLNEDNNTRVLFERVLTSGS 456 (530)
T ss_dssp TTTCHHHHHHHHHHHHHSCC
T ss_pred hCCCHhhHHHHHHHHHhccC
Confidence 66666666666666666544
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.66 E-value=5.1e-08 Score=88.60 Aligned_cols=98 Identities=16% Similarity=0.084 Sum_probs=86.3
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCc-c-hHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI-W-HIASYLQAA 428 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~-~-~~a~~~~g~ 428 (460)
.......|..+...|+|++|.+.|+.++..+|. .. ..+.+|.++++.+++++|+..|++++...+. . ..+++++|.
T Consensus 102 ~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~ 179 (282)
T 4f3v_A 102 LAITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGV 179 (282)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHH
Confidence 345566788899999999999999999999998 66 8899999999999999999999999887433 2 469999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhh
Q 012608 429 ALSAMGMENEAQVALKEGTTLE 450 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~ 450 (460)
++..+|++++|+..|++++.-+
T Consensus 180 al~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 180 AAANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHHTTCHHHHHHHHHHHHTST
T ss_pred HHHHCCCHHHHHHHHHHHhcCC
Confidence 9999999999999999998543
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.65 E-value=4.3e-08 Score=77.98 Aligned_cols=84 Identities=15% Similarity=0.093 Sum_probs=76.0
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc-------HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS-------PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIA 422 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a 422 (460)
++..+...|..++..|+|++|+..|+++++.+|. . ..+++++|.++...|++++|+..|+++++++| ++..
T Consensus 37 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~ 114 (131)
T 1elr_A 37 NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDV 114 (131)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHH
Confidence 4677899999999999999999999999999887 5 78899999999999999999999999999999 5888
Q ss_pred HHHHHHHHHhcCC
Q 012608 423 SYLQAAALSAMGM 435 (460)
Q Consensus 423 ~~~~g~~~~~~~~ 435 (460)
+..++.+...+++
T Consensus 115 ~~~l~~~~~~~~~ 127 (131)
T 1elr_A 115 LKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888766544
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.65 E-value=7.2e-08 Score=97.34 Aligned_cols=101 Identities=8% Similarity=-0.099 Sum_probs=63.1
Q ss_pred HHHHhHHhhhHHHh-------hCCHH-------HHHHHHHHHhh-cCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhh
Q 012608 350 ETLNSKKKGDVAFR-------QKDLK-------DAIECYTQFID-AGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414 (460)
Q Consensus 350 ~~~~~~~~g~~~~~-------~~~~~-------~A~~~~~~al~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 414 (460)
++..|...|..+.+ .|+++ +|+..|++|++ .+|+ +..+|..++..+...|++++|...|+++++
T Consensus 271 ~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~al~ 349 (530)
T 2ooe_A 271 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLA 349 (530)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHhC
Confidence 45566666666654 56665 66666666665 5666 666666666666666666666666666666
Q ss_pred hCCcch-HHHHHHHHHHHhcCChHHHHHHHHHhhhhhh
Q 012608 415 ISPIWH-IASYLQAAALSAMGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 415 l~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 451 (460)
++|+++ .+|...|.++..+|++++|.+.|++|++..|
T Consensus 350 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~ 387 (530)
T 2ooe_A 350 IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDAR 387 (530)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred ccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccC
Confidence 666653 4666666665555555555555555555444
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.1e-07 Score=92.75 Aligned_cols=100 Identities=12% Similarity=0.014 Sum_probs=84.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhc-----CCCc--cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC-------
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDA-----GTMV--SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------- 416 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~------- 416 (460)
+....+....+.++|+|++|++.|++++++ .|++ ....+.++|.+|..+|+|++|+..+++++++.
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 445556666777899999999999999965 2332 45679999999999999999999999999763
Q ss_pred -CcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhh
Q 012608 417 -PIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 450 (460)
Q Consensus 417 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 450 (460)
|+-+..++++|.+|..+|++++|+..|++|+++-
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 4457789999999999999999999999999874
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.61 E-value=2.3e-07 Score=75.48 Aligned_cols=92 Identities=11% Similarity=-0.059 Sum_probs=84.5
Q ss_pred hhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHh
Q 012608 357 KGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA 432 (460)
Q Consensus 357 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~ 432 (460)
+|..+...+.+++|++.|++|.+. . ++.+++++|.+|.. .+++++|+..|++|.+. .++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 888898889999999999999998 3 67899999999998 89999999999999987 689999999999999
Q ss_pred ----cCChHHHHHHHHHhhhhhhhc
Q 012608 433 ----MGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 433 ----~~~~~~A~~~~~~al~l~~~~ 453 (460)
.+++++|++.|++|.+.....
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~~ 130 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSED 130 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCHH
Confidence 999999999999999885443
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.57 E-value=1.3e-07 Score=90.66 Aligned_cols=101 Identities=14% Similarity=-0.000 Sum_probs=88.1
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcC--------CCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCc-----
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAG--------TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI----- 418 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~----- 418 (460)
..+...|..+...|+|++|++.|++++++. |. ...++.++|.++...|++++|+..+++++++.|.
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 172 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQ 172 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGG
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHH
Confidence 346789999999999999999999999875 33 4567888999999999999999999999999985
Q ss_pred chHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 419 WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 419 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
...++.++|.++..+|++++|...+++++++.+..
T Consensus 173 ~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 173 QLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp GHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 35688999999999999999999999999987654
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.55 E-value=3e-07 Score=88.00 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=50.0
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhc--------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC------
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS------ 416 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~------ 416 (460)
...+...|..+...|+|++|+..|.+++++ .-- .++.++|.++...|++++|+..+++++++.
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~ 129 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYAL---WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLE 129 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccc
Confidence 334455555555555555555555555431 111 223445555555555555555555555543
Q ss_pred --CcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhh
Q 012608 417 --PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEA 451 (460)
Q Consensus 417 --p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 451 (460)
|....++.++|.++..+|++++|...|++++++.+
T Consensus 130 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 130 QLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp TSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred cCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 23344455555555555555555555555555544
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1e-07 Score=91.11 Aligned_cols=81 Identities=5% Similarity=-0.045 Sum_probs=58.0
Q ss_pred hccc-CCCCCCeEEEEEEc-------CCcEEEEEEecCCC---CCCHHHHHHHHHHHhcCC-C--CccceeeeEEeeC--
Q 012608 31 VSEH-GEKAPNVVYKGKLE-------NQRRIAVKRFNRMA---WPDPRQFLEEARSVGQLR-N--NRLTNLLGCCCEG-- 94 (460)
Q Consensus 31 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~~iv~~~~~~~~~-- 94 (460)
++.| +.|..+.+|+.... +++.+++|+..... ......+.+|+.+++.|. + -.+++++.++...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4566 78888999998754 26788999865432 111246788999999883 3 4578888887654
Q ss_pred -CeeEEEEEcCCCCCHHh
Q 012608 95 -DERLLVAEYMPNETLAK 111 (460)
Q Consensus 95 -~~~~lv~e~~~g~sL~~ 111 (460)
+..++|||+++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999877653
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=4.4e-07 Score=81.62 Aligned_cols=88 Identities=11% Similarity=0.021 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHhhcCCCc-cHHHHhhHHHHHHh-----cCChHHHHHHHHHhhhhCCcc-hHHHHHHHHHHHh-cCChH
Q 012608 366 DLKDAIECYTQFIDAGTMV-SPTVYARRSLCYLM-----SDMPQDALNDAMQAQIISPIW-HIASYLQAAALSA-MGMEN 437 (460)
Q Consensus 366 ~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~~-----~~~~~~A~~~~~~a~~l~p~~-~~a~~~~g~~~~~-~~~~~ 437 (460)
...+|...+++|+++||+. +..+|..+|..|.. .|+.+.|...|++|++++|+. ..+++..|..+.. +|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 3578999999999999992 34589999999998 499999999999999999975 9999999999988 59999
Q ss_pred HHHHHHHHhhhhhhhc
Q 012608 438 EAQVALKEGTTLEAKK 453 (460)
Q Consensus 438 ~A~~~~~~al~l~~~~ 453 (460)
+|.+.+++|++.+|..
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999999984
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.47 E-value=6.3e-07 Score=89.45 Aligned_cols=97 Identities=13% Similarity=-0.000 Sum_probs=86.7
Q ss_pred HHHHHhHHhhhHHHhhC---CHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCCcchH
Q 012608 349 QETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHI 421 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~ 421 (460)
.++.+++.+|..+...| ++++|+++|++|++. . ++.+++++|.+|.. .+++++|+..|++|++.. ++.
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~ 400 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSA 400 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHH
Confidence 35677888999988766 899999999999987 3 67889999999998 899999999999999864 789
Q ss_pred HHHHHHHHHHh----cCChHHHHHHHHHhhhhh
Q 012608 422 ASYLQAAALSA----MGMENEAQVALKEGTTLE 450 (460)
Q Consensus 422 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 450 (460)
+++++|.+|.. .+++++|+..|++|++.+
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~ 433 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTND 433 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 99999999998 899999999999999998
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.4e-06 Score=84.46 Aligned_cols=102 Identities=13% Similarity=0.089 Sum_probs=63.5
Q ss_pred CCCCCCccccCHHHHHHHhcC---Ccc--cchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCC-------CCHHHHH
Q 012608 4 VDGLPSFREFTLEQLKNATSG---FAV--ENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAW-------PDPRQFL 70 (460)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~---f~~--~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~ 70 (460)
||.-..+..++-+++..-... |.. .--++.+|.|.++.||+++.. +++.++||....... .....+.
T Consensus 3 ~~~~~~~~~l~~~~v~~~l~~~~~~~~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~ 82 (397)
T 2olc_A 3 VTKTPLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRAR 82 (397)
T ss_dssp --CCCCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHH
T ss_pred CCCCcccccCCHHHHHHHHHhcCcCCCCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHH
Confidence 445555666777776554432 221 123578899999999999843 578899998653211 1245678
Q ss_pred HHHHHHhcCC-C-C-ccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 71 EEARSVGQLR-N-N-RLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 71 ~E~~~l~~l~-h-~-~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
.|+++++.+. + | .+++++.+ ..+..++|||+++|.
T Consensus 83 ~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 83 IESSALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHL 120 (397)
T ss_dssp HHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTS
T ss_pred HHHHHHHHhhhhCCCCcCeEEEE--cCCccEEEEEeCCCc
Confidence 8999998883 2 3 45566654 344568999999864
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.41 E-value=4.7e-07 Score=89.71 Aligned_cols=104 Identities=9% Similarity=-0.023 Sum_probs=89.2
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc--------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC----
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS---- 416 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~---- 416 (460)
..+..+.++|.+|..+|+|++|+.+|++++++ .|+ ....++|+|.+|..+|++++|+..|++|+++.
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~l 427 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ-LGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTH 427 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 56888999999999999999999999999955 344 56789999999999999999999999999763
Q ss_pred -Ccc---hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 417 -PIW---HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 417 -p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
|++ .+...+++.++.++++|++|...|.+|.+-.-++
T Consensus 428 G~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~ 468 (490)
T 3n71_A 428 GPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNN 468 (490)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444 6667789999999999999999999987644333
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.40 E-value=7.6e-07 Score=87.93 Aligned_cols=97 Identities=9% Similarity=0.024 Sum_probs=76.4
Q ss_pred HHHHhHHhhhHHHhhC---CHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhc----CChHHHHHHHHHhhhhCCcchHH
Q 012608 350 ETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----DMPQDALNDAMQAQIISPIWHIA 422 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~a~~l~p~~~~a 422 (460)
++.+++.+|..+...| ++++|++.|.++++.+|. ....++++|.+|... +++++|+..|+++. |+++.+
T Consensus 175 ~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a 250 (452)
T 3e4b_A 175 TDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPAS 250 (452)
T ss_dssp CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHH
T ss_pred CHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHH
Confidence 3457788888888888 888888888888888888 677777888887665 67888888888887 788888
Q ss_pred HHHHHHH-H--HhcCChHHHHHHHHHhhhhh
Q 012608 423 SYLQAAA-L--SAMGMENEAQVALKEGTTLE 450 (460)
Q Consensus 423 ~~~~g~~-~--~~~~~~~~A~~~~~~al~l~ 450 (460)
++++|.+ + ...+++++|++.|++|++.+
T Consensus 251 ~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 251 WVSLAQLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 8888887 4 46788888888888887554
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.39 E-value=9.5e-07 Score=67.89 Aligned_cols=71 Identities=10% Similarity=-0.197 Sum_probs=63.8
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhhhhC-------CcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 386 PTVYARRSLCYLMSDMPQDALNDAMQAQIIS-------PIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
+.-.+.+|..++..++|..|+.-|++|++.. +..+..+.++|.+++++|++++|+..+++|++++|++..+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHH
Confidence 3446788999999999999999999999874 4568899999999999999999999999999999998765
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.36 E-value=9.6e-07 Score=66.21 Aligned_cols=70 Identities=7% Similarity=-0.092 Sum_probs=63.7
Q ss_pred HHHHhHHhhhHHHhhCC---HHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcch
Q 012608 350 ETLNSKKKGDVAFRQKD---LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH 420 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~ 420 (460)
++..+...|.+++..++ .++|...+++|++++|+ +..+...+|..++..|+|++|+..++++++.+|..+
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 56788889999975555 79999999999999999 999999999999999999999999999999999843
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.35 E-value=3e-06 Score=80.24 Aligned_cols=92 Identities=15% Similarity=0.235 Sum_probs=52.6
Q ss_pred cCHHHHHHHh-cCCcc-cchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC--CCccceee
Q 012608 13 FTLEQLKNAT-SGFAV-ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR--NNRLTNLL 88 (460)
Q Consensus 13 ~~~~~~~~~~-~~f~~-~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~ 88 (460)
.++.++.... ..|.. ..-+..++.|..+.||+....+| .+++|+... ....+..|+.+++.|. .-.+++++
T Consensus 17 ~~~~~l~~~l~~~~~~~~~~~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~ 91 (346)
T 2q83_A 17 KKLTELAENVLQGWDVQAEKIDVIQGNQMALVWKVHTDSG-AVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGIL 91 (346)
T ss_dssp HHHHHHHHHHGGGSCCCCCEEEECC----CEEEEEEETTE-EEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBC
T ss_pred hHHHHHHHHHHHHcCCceEEeeeccccccCcEEEEEeCCC-CEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCcee
Confidence 3445554444 33432 11234566677899999987555 588998865 2345556677776663 11344444
Q ss_pred e------EEeeCCeeEEEEEcCCCCCH
Q 012608 89 G------CCCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 89 ~------~~~~~~~~~lv~e~~~g~sL 109 (460)
. +...++..+++|+|++|.++
T Consensus 92 ~~~~g~~~~~~~~~~~~l~~~i~G~~~ 118 (346)
T 2q83_A 92 PNKKGSLYSKHGSFLFVVYDWIEGRPF 118 (346)
T ss_dssp CCTTSCSCEEETTEEEEEEECCCCBCC
T ss_pred ecCCCCEEEEECCEEEEEEEeecCccC
Confidence 3 12346678999999998654
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1.7e-06 Score=67.66 Aligned_cols=93 Identities=12% Similarity=0.027 Sum_probs=80.3
Q ss_pred hCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHH---HHHHHHHhhhhC-C-cchHHHHHHHHHHHhcCChHH
Q 012608 364 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQD---ALNDAMQAQIIS-P-IWHIASYLQAAALSAMGMENE 438 (460)
Q Consensus 364 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~a~~l~-p-~~~~a~~~~g~~~~~~~~~~~ 438 (460)
......+.+.|.+++..++. .....++.|.++.+..+... +|..++..++-+ | ..-+.+|.+|.+++++|+|++
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~ 92 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHH
Confidence 34456777788888887776 78889999999999888777 999999999888 6 678999999999999999999
Q ss_pred HHHHHHHhhhhhhhccccc
Q 012608 439 AQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 439 A~~~~~~al~l~~~~~~a~ 457 (460)
|+.+++..|+++|++..|.
T Consensus 93 A~~~~~~lL~~eP~n~QA~ 111 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQNNQAK 111 (126)
T ss_dssp HHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHhCCCCHHHH
Confidence 9999999999999998774
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.29 E-value=1.6e-06 Score=70.37 Aligned_cols=81 Identities=12% Similarity=-0.006 Sum_probs=72.3
Q ss_pred HHHHhHHhhhHHHhhC---CHHHHHHHHHHHhhcC-CCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 350 ETLNSKKKGDVAFRQK---DLKDAIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
+.+..++.|.++.+.+ +.++|+..++..++.+ |.+...+++++|..|+++|+|++|++.++++++++|+|.+|..-
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 4678899999999988 8889999999999999 84378999999999999999999999999999999999999876
Q ss_pred HHHHH
Q 012608 426 QAAAL 430 (460)
Q Consensus 426 ~g~~~ 430 (460)
+-.+-
T Consensus 111 k~~ie 115 (152)
T 1pc2_A 111 ERLID 115 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.25 E-value=5.3e-06 Score=82.67 Aligned_cols=97 Identities=11% Similarity=-0.079 Sum_probs=85.6
Q ss_pred HHHHHhHHhhhHHHh----hCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCCcch
Q 012608 349 QETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWH 420 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~ 420 (460)
.++.+++.+|..+.. .+++++|++.|.+|++.+ ++.+++++|.+|.. .+++++|+..|++|++. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG---LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 567889999999998 899999999999998864 56788889999998 78999999999999776 588
Q ss_pred HHHHHHHHHHHh----cCChHHHHHHHHHhhhhh
Q 012608 421 IASYLQAAALSA----MGMENEAQVALKEGTTLE 450 (460)
Q Consensus 421 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 450 (460)
.+++++|.+|.. .+++++|++.|++|++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999999999988 889999999999998763
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.20 E-value=4.1e-06 Score=67.95 Aligned_cols=80 Identities=18% Similarity=0.034 Sum_probs=71.3
Q ss_pred hCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHh----cCChHHH
Q 012608 364 QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEA 439 (460)
Q Consensus 364 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~----~~~~~~A 439 (460)
.+++++|++.|.++.+.+.. .. . +|.+|...+..++|+..|++|.+. .++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FG--C--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-TH--H--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hh--h--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 35799999999999998755 33 3 889999999999999999999988 689999999999999 8999999
Q ss_pred HHHHHHhhhhh
Q 012608 440 QVALKEGTTLE 450 (460)
Q Consensus 440 ~~~~~~al~l~ 450 (460)
++.|++|.+..
T Consensus 81 ~~~~~~Aa~~g 91 (138)
T 1klx_A 81 AQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999998763
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=98.18 E-value=2e-05 Score=73.27 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=61.6
Q ss_pred hhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC---CCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 30 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
-++.++.|....+|+... ++..+++|+.... ....+..|+..|+.|. ...+++++.++...+..++|||+++|
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 356789999999999986 4678889986542 2567899999999983 36788999988878889999999998
Q ss_pred CCH
Q 012608 107 ETL 109 (460)
Q Consensus 107 ~sL 109 (460)
.++
T Consensus 116 ~~~ 118 (312)
T 3jr1_A 116 SKN 118 (312)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.15 E-value=2.3e-05 Score=76.25 Aligned_cols=102 Identities=10% Similarity=-0.002 Sum_probs=78.9
Q ss_pred HhHHhhhHHHhhCCHHHHHHHHHHHhhcCCC-----ccHHHHhhHHHHHHhcCChHHHHHHHHHhhhh------CCcchH
Q 012608 353 NSKKKGDVAFRQKDLKDAIECYTQFIDAGTM-----VSPTVYARRSLCYLMSDMPQDALNDAMQAQII------SPIWHI 421 (460)
Q Consensus 353 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l------~p~~~~ 421 (460)
.....|..+...|++++|+..+++++...+. ....++.++|.+|...|+|++|+..+++++.. .|....
T Consensus 97 ~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~ 176 (434)
T 4b4t_Q 97 LKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVD 176 (434)
T ss_dssp HHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHH
Confidence 3344555555667777777777777654221 13567888999999999999999999998866 456688
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 422 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
++..+|.+|..+|+|++|...|++|+.+.+...
T Consensus 177 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 209 (434)
T 4b4t_Q 177 VHLLESKVYHKLRNLAKSKASLTAARTAANSIY 209 (434)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999998876543
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.7e-05 Score=78.22 Aligned_cols=95 Identities=11% Similarity=-0.072 Sum_probs=74.9
Q ss_pred HHHHHHhHHhhhH-H--HhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcC-----ChHHHHHHHHHhhhhCCcc
Q 012608 348 MQETLNSKKKGDV-A--FRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD-----MPQDALNDAMQAQIISPIW 419 (460)
Q Consensus 348 ~~~~~~~~~~g~~-~--~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~a~~l~p~~ 419 (460)
..++.+++++|.. + ...+++++|+.+|++|++.+ ++.+++++|.+|. .| ++++|+..|++|. |++
T Consensus 245 ~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~ 317 (452)
T 3e4b_A 245 PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GRE 317 (452)
T ss_dssp GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTC
T ss_pred CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCC
Confidence 4567778888887 4 46788888888888888654 5677888888887 45 8888888888888 888
Q ss_pred hHHHHHHHHHHHh----cCChHHHHHHHHHhhhh
Q 012608 420 HIASYLQAAALSA----MGMENEAQVALKEGTTL 449 (460)
Q Consensus 420 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 449 (460)
+.+++++|.+|.. ..++++|+..|++|.+.
T Consensus 318 ~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 351 (452)
T 3e4b_A 318 VAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN 351 (452)
T ss_dssp HHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh
Confidence 8888888887776 34888888888888764
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.10 E-value=6.1e-05 Score=70.66 Aligned_cols=99 Identities=18% Similarity=0.153 Sum_probs=67.0
Q ss_pred CccccCHHHHHHHhcCCccc--chhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCC--Ccc
Q 012608 9 SFREFTLEQLKNATSGFAVE--NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN--NRL 84 (460)
Q Consensus 9 ~~~~~~~~~~~~~~~~f~~~--~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~~i 84 (460)
++..++.+++......|... .-+..++ |....||+....+|+.+++|...... .....+..|..+++.+.. -.+
T Consensus 7 ~~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 7 TFQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCee
Confidence 47778888888877665432 1234566 77889999887678789999986432 245678889998888842 124
Q ss_pred ceeeeE-----EeeCCeeEEEEEcCCCCCH
Q 012608 85 TNLLGC-----CCEGDERLLVAEYMPNETL 109 (460)
Q Consensus 85 v~~~~~-----~~~~~~~~lv~e~~~g~sL 109 (460)
++++.. ...++..+++|++++|.++
T Consensus 85 p~~~~~~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEEC
T ss_pred cceeecCCcEEEEECCEEEEEEEecCCCCC
Confidence 444443 2234566889999997543
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.09 E-value=2.9e-05 Score=72.75 Aligned_cols=160 Identities=13% Similarity=0.154 Sum_probs=93.3
Q ss_pred ccccCHHHHHHHhcCCccc--chhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCc--cc
Q 012608 10 FREFTLEQLKNATSGFAVE--NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR--LT 85 (460)
Q Consensus 10 ~~~~~~~~~~~~~~~f~~~--~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~--iv 85 (460)
+..++.+++......|... .-++.++.|....+|+....+| .+++|...... ....+..|+.+++.|...+ ++
T Consensus 4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 4567888998888877642 2356677888899999987655 67899876531 2346677888888773212 34
Q ss_pred eeeeE------EeeCCeeEEEEEcCCCCCHHh----h----------hhcc-CC--CC----CC---HHHHHH-------
Q 012608 86 NLLGC------CCEGDERLLVAEYMPNETLAK----H----------LFHW-ET--HP----MK---WAMRLR------- 128 (460)
Q Consensus 86 ~~~~~------~~~~~~~~lv~e~~~g~sL~~----~----------~~~~-~~--~~----~~---~~~~~~------- 128 (460)
+++.. ....+..++++++++|.++.. . ++.. .. .+ .. |.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 44421 123466789999999865421 0 1100 00 00 11 111000
Q ss_pred -----HHHHHHHHHHHHHh-------CCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 129 -----VVLHLAQALEYCTS-------KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 129 -----i~~qi~~~l~~lH~-------~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
+...+...+..++. .+ ++|+|+++.|||+++++.+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~-liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcc-cCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113334455542 24 8999999999999877656899999764
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.07 E-value=2.6e-05 Score=84.28 Aligned_cols=90 Identities=14% Similarity=0.150 Sum_probs=74.9
Q ss_pred hhhHHHhhCCHHHHHHHHHHHh--------------------hc--CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhh
Q 012608 357 KGDVAFRQKDLKDAIECYTQFI--------------------DA--GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414 (460)
Q Consensus 357 ~g~~~~~~~~~~~A~~~~~~al--------------------~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 414 (460)
.|..+...|.|++|.+.|+++- +. ..+ .+.+|+++|.++...|++++|+..|.+|
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn-~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCN-EPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 3777777777777777666642 21 134 6788999999999999999999999887
Q ss_pred hCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 415 l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
+++.+|++.|.++.++|+|++|+++|..|.+.+++
T Consensus 1132 ---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 89999999999999999999999999999988744
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.06 E-value=1.2e-05 Score=86.81 Aligned_cols=93 Identities=12% Similarity=0.023 Sum_probs=73.9
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCc---------
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI--------- 418 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~--------- 418 (460)
......|++.|.++.+.|+|++|+++|.+| + ++..|.+.+.++.+.|+|++|++.+..|++..++
T Consensus 1102 vn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~Laf 1175 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIF 1175 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHH
Confidence 456789999999999999999999999887 5 7888999999999999999999999887766533
Q ss_pred ------------------chHHHHHHHHHHHhcCChHHHHHHHHHh
Q 012608 419 ------------------WHIASYLQAAALSAMGMENEAQVALKEG 446 (460)
Q Consensus 419 ------------------~~~a~~~~g~~~~~~~~~~~A~~~~~~a 446 (460)
+...|++.|..++..|+|++|+..|.+|
T Consensus 1176 aYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1176 ALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 2234556677777777777776666665
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.6e-05 Score=73.23 Aligned_cols=77 Identities=21% Similarity=0.224 Sum_probs=58.3
Q ss_pred chhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-C--CccceeeeEEeeCCeeEEEEEcCC
Q 012608 29 NIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-N--NRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 29 ~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.-++.+|.|..+.||+.++.+|+.|++|+...........|.+|+..|+.|. . -.+++++++. ..++|||+++
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~ 93 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeec
Confidence 4467789999999999999999999999876555444567889999999884 2 2355666542 2478999998
Q ss_pred CCCH
Q 012608 106 NETL 109 (460)
Q Consensus 106 g~sL 109 (460)
++..
T Consensus 94 ~~~~ 97 (288)
T 3f7w_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 7643
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.01 E-value=7e-06 Score=80.04 Aligned_cols=103 Identities=8% Similarity=0.024 Sum_probs=78.3
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc----------------HHHHhhHHHHHHhcCChHHHHHHHHHhhh
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----------------PTVYARRSLCYLMSDMPQDALNDAMQAQI 414 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 414 (460)
+.+....|..+.+.|+|++|++.|.++++.+|... ..++.++|.+|...|++++|++.+.+++.
T Consensus 4 p~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 4 PGSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTE 83 (434)
T ss_dssp TTHHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34556778888888999999999999998887621 12467788889999999999999999888
Q ss_pred hCCcchHH------HHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 415 ISPIWHIA------SYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 415 l~p~~~~a------~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
+.+...++ ...+|.++...|++++|+..+++++.+.++.
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 128 (434)
T 4b4t_Q 84 YMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE 128 (434)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 76654433 4456777777888888888888888776654
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=98.00 E-value=1.3e-05 Score=77.22 Aligned_cols=96 Identities=9% Similarity=-0.013 Sum_probs=74.4
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
...+..|..+|..+.+.|+|++|++.|.+| . ++..|...+.++...|+++.|..+... |..+|++ ...+.
T Consensus 145 Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv 214 (449)
T 1b89_A 145 YNNVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELI 214 (449)
T ss_dssp HHHTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHH
T ss_pred HHHhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHH
Confidence 355678888899999999999999999988 3 466777777778888888888666554 4466655 33577
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
..|...|++++|+..|++++.+++..
T Consensus 215 ~~Yek~G~~eEai~lLe~aL~le~ah 240 (449)
T 1b89_A 215 NYYQDRGYFEELITMLEAALGLERAH 240 (449)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSTTCC
T ss_pred HHHHHCCCHHHHHHHHHHHhCCcHHH
Confidence 78888899999999999999888654
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.98 E-value=4.5e-05 Score=74.37 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=46.9
Q ss_pred hhcccCCCCCCeEEEEEEcCCcEEEEEEecCC----CC--C---CHHHHHHHHHHHhc-CCCCccceeeeEEeeCCeeEE
Q 012608 30 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRM----AW--P---DPRQFLEEARSVGQ-LRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~--~---~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~l 99 (460)
-++.+|.|..+.||++.. +++.++||..... .. . ....+..|+..+.. .....+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 456789999999999964 5678999943211 11 1 22334444433322 2335677887765 566799
Q ss_pred EEEcC-CC
Q 012608 100 VAEYM-PN 106 (460)
Q Consensus 100 v~e~~-~g 106 (460)
|||++ +|
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 86
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.95 E-value=5.8e-05 Score=69.45 Aligned_cols=101 Identities=11% Similarity=-0.025 Sum_probs=52.3
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCC-----CccHHHHhhHHHHHHhcC--ChHHHHHHHHHhhhhCCcc--
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT-----MVSPTVYARRSLCYLMSD--MPQDALNDAMQAQIISPIW-- 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p-----~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~a~~l~p~~-- 419 (460)
...+.....+..+.+.|+.+.|.+.+++..+.+| ++.......-+.+.+..| ++++|...|+++.+..|++
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~ 213 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKT 213 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCccc
Confidence 3445555555556666666666666666655555 211112221122233333 5666666666665555552
Q ss_pred hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 420 HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 420 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
...+++ +++.+|++++|.+.++..++++|+
T Consensus 214 ~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~ 243 (310)
T 3mv2_B 214 QLGLLN---LHLQQRNIAEAQGIVELLLSDYYS 243 (310)
T ss_dssp HHHHHH---HHHHHTCHHHHHHHHHHHHSHHHH
T ss_pred HHHHHH---HHHHcCCHHHHHHHHHHHHHhccc
Confidence 233333 566666666666666665655554
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.87 E-value=6e-05 Score=69.34 Aligned_cols=101 Identities=9% Similarity=-0.146 Sum_probs=85.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCC--CccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCc----chHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGT--MVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPI----WHIASY 424 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~----~~~a~~ 424 (460)
...+.-.|.++...|++++|++.+.++|..+| . ...++...+.+++++|+.+.|.+.+++..+.+|+ +-....
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~ 178 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMIL 178 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHH
Confidence 44557899999999999999999999999997 6 8899999999999999999999999999999994 234444
Q ss_pred HH--HHHHHhcC--ChHHHHHHHHHhhhhhhh
Q 012608 425 LQ--AAALSAMG--MENEAQVALKEGTTLEAK 452 (460)
Q Consensus 425 ~~--g~~~~~~~--~~~~A~~~~~~al~l~~~ 452 (460)
++ |.+....| ++++|...|+++.+..|+
T Consensus 179 ~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 179 NLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 44 44466656 999999999999887765
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=6.6e-05 Score=71.68 Aligned_cols=138 Identities=15% Similarity=0.180 Sum_probs=83.6
Q ss_pred hcccCCCCCCeEEEEEEc--------CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEE
Q 012608 31 VSEHGEKAPNVVYKGKLE--------NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 101 (460)
++.+..|-...+|+.... +++.+++|+.... ........+|..+++.|. +.-.+++++++.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 456777888999999864 2578999986332 234567779999999883 4334677776543 3999
Q ss_pred EcCCCCCHHhh-hhc---------------cC----CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 012608 102 EYMPNETLAKH-LFH---------------WE----THPMK--WAMRLRVVLHLAQ-------------------ALEYC 140 (460)
Q Consensus 102 e~~~g~sL~~~-~~~---------------~~----~~~~~--~~~~~~i~~qi~~-------------------~l~~l 140 (460)
||++|.+|..- +.. .. ..... +.++.+++.++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665421 000 00 11122 3455555544422 12333
Q ss_pred ----HhCC---CcccccccCCcEEEcCC----CCeEEccCCCcc
Q 012608 141 ----TSKG---RALYHDLNAYRILFDED----GNPRLSTFGLMK 173 (460)
Q Consensus 141 ----H~~~---~iiH~Dikp~Nill~~~----~~~kl~DFg~a~ 173 (460)
...+ .++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2211 28999999999999876 789999998764
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.84 E-value=1.5e-05 Score=76.74 Aligned_cols=87 Identities=16% Similarity=0.032 Sum_probs=64.7
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALS 431 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~ 431 (460)
.+|...|..++..|.|++|..+|+++ ..|.+++.|+.++|+|++|++.+.+| +++..|...+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 49999999999999999999999988 24889999999999999999999999 47899999999999
Q ss_pred hcCChHHHHHHHHHhhhhhhhc
Q 012608 432 AMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 432 ~~~~~~~A~~~~~~al~l~~~~ 453 (460)
..|+++.|..+... +.++|+.
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad~ 209 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHADE 209 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHHH
T ss_pred HcCcHHHHHHHHHH-HHhCHhh
Confidence 99999999887764 4466654
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.80 E-value=7.1e-05 Score=61.13 Aligned_cols=95 Identities=7% Similarity=-0.059 Sum_probs=73.2
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc--------cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCC-----
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISP----- 417 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p----- 417 (460)
.-.++.....++..|.|+.|+-..+.++.+..++ ...++...|.+++..++|..|...|++||++..
T Consensus 20 ~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 20 HMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp -CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 3456667777888999999999999877653221 123677888899999999999999999865431
Q ss_pred --------------------cchHHHHHHHHHHHhcCChHHHHHHHHH
Q 012608 418 --------------------IWHIASYLQAAALSAMGMENEAQVALKE 445 (460)
Q Consensus 418 --------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 445 (460)
...+..|+++.||..++++++|+..++.
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1236889999999999999999999875
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00016 Score=62.08 Aligned_cols=141 Identities=12% Similarity=0.025 Sum_probs=93.4
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCccCCC
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL 185 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~~t~ 185 (460)
-||.+.+.. .+.+++++++|.++.|.+.+|.-+-. +. -..+=+.|..|++..+|.+-+.+ +.+ .....
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~ 101 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQ-PRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEP 101 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhccc-CCceecCCcceEEecCCceeccc-ccc--------ccccc
Confidence 478888865 46799999999999999999887622 22 12233457999999999987663 111 01233
Q ss_pred cccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHHccc-
Q 012608 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY- 264 (460)
Q Consensus 186 ~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~- 264 (460)
.+.+||... ...+.+.=|||||+++|.-+--..|.. -+..+++.+.+||..|...
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~-----------------------eE~eLS~~LE~LL~~Mt~~~ 157 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN-----------------------EERELSPPLEQLIDHMANTV 157 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT-----------------------EEECCCHHHHHHHHHHTTCC
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc-----------------------cchhhCHHHHHHHHHHHhcc
Confidence 466888763 344567789999999999987654321 1234568899999999865
Q ss_pred ------------------------CCCCCCChhHHHHHhccc
Q 012608 265 ------------------------EPRERPNPKSLVTALSPL 282 (460)
Q Consensus 265 ------------------------~p~~Rps~~~il~~L~~~ 282 (460)
.+..|++.++|++.-..-
T Consensus 158 ~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~h 199 (229)
T 2yle_A 158 EADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAH 199 (229)
T ss_dssp C--------------------CCSCCCCCCSHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccccCcCCHHHHHHHHHhh
Confidence 245778888888765443
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=6.1e-05 Score=67.77 Aligned_cols=79 Identities=11% Similarity=-0.042 Sum_probs=61.4
Q ss_pred HHHHh-hcCCCccHHHHhhHHHHHHh---c--CC------hHHHHHHHHHhhhhCCc--chHHHHHHHHHHHhc-----C
Q 012608 374 YTQFI-DAGTMVSPTVYARRSLCYLM---S--DM------PQDALNDAMQAQIISPI--WHIASYLQAAALSAM-----G 434 (460)
Q Consensus 374 ~~~al-~~~p~~~~~~~~~~~~~~~~---~--~~------~~~A~~~~~~a~~l~p~--~~~a~~~~g~~~~~~-----~ 434 (460)
+.+++ +.+|+ +...++-.|.+... . |. ...|...+++|+++||+ +..+|..+|..|... |
T Consensus 140 ~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG 218 (301)
T 3u64_A 140 LHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG 218 (301)
T ss_dssp HHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC
T ss_pred HHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC
Confidence 34444 45666 66666666655432 1 32 36789999999999999 566999999999996 9
Q ss_pred ChHHHHHHHHHhhhhhhhc
Q 012608 435 MENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 435 ~~~~A~~~~~~al~l~~~~ 453 (460)
+.++|.+.|++|++|+|+.
T Consensus 219 d~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999965
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00018 Score=67.70 Aligned_cols=138 Identities=9% Similarity=-0.023 Sum_probs=73.6
Q ss_pred hcccCCCCCCe-EEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-C-CccceeeeEEeeCCeeEEEEEcCCCC
Q 012608 31 VSEHGEKAPNV-VYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-N-NRLTNLLGCCCEGDERLLVAEYMPNE 107 (460)
Q Consensus 31 ~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~~iv~~~~~~~~~~~~~lv~e~~~g~ 107 (460)
++.++.|+... +|+....+|+.+++|....... ..+..|+.+++.+. + -.+++++.+....+ +++||++.|.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 34555555444 6677654467787876543321 33456777777773 2 34667777643333 7899999877
Q ss_pred CHHhhhhcc---------------------CC---CCCCHHHHH-------HHH-------------HHHHHHHHHH---
Q 012608 108 TLAKHLFHW---------------------ET---HPMKWAMRL-------RVV-------------LHLAQALEYC--- 140 (460)
Q Consensus 108 sL~~~~~~~---------------------~~---~~~~~~~~~-------~i~-------------~qi~~~l~~l--- 140 (460)
++.+.+... .. ..+...... .+. ..+...+..+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 765433210 00 011111100 000 0111122222
Q ss_pred ---HhCCCcccccccCCcEEEcCC----CCeEEccCCCccc
Q 012608 141 ---TSKGRALYHDLNAYRILFDED----GNPRLSTFGLMKN 174 (460)
Q Consensus 141 ---H~~~~iiH~Dikp~Nill~~~----~~~kl~DFg~a~~ 174 (460)
+... ++|+|+.+.|||++.+ +.+.|+||+.+..
T Consensus 178 ~~~~~~~-lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMV-FVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCE-EECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCe-eEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1234 8999999999999874 6789999998764
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.71 E-value=5.8e-05 Score=70.80 Aligned_cols=77 Identities=14% Similarity=0.101 Sum_probs=65.9
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
.++..+...|..+...|++++|+..+++|++++|+ ...|..+|.++...|++++|++.|++|+.++|....-++..+
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~ 351 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIEN 351 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhC
Confidence 45666777788888889999999999999999976 567888999999999999999999999999998865444333
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00022 Score=65.97 Aligned_cols=71 Identities=13% Similarity=0.127 Sum_probs=45.8
Q ss_pred hcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCcc-ceeeeEEeeCCeeEEEEEcC-CCCC
Q 012608 31 VSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-TNLLGCCCEGDERLLVAEYM-PNET 108 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~-~g~s 108 (460)
++.|+.|..+.+|+. ..+++|+....... .-...+|+.+++.+...++ ++++++. .+.-++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 677788989999998 55889987653211 1223568888887742222 5666543 33457899999 7655
Q ss_pred H
Q 012608 109 L 109 (460)
Q Consensus 109 L 109 (460)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=9.9e-05 Score=71.90 Aligned_cols=84 Identities=12% Similarity=-0.049 Sum_probs=69.3
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc--------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC----
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS---- 416 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~---- 416 (460)
..+..+.++|.+|..+|+|++|+.+|.+++++ .|+ ....++|+|.+|..+|++++|+..+++|+++.
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~l 405 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV-RGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTH 405 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc
Confidence 56788999999999999999999999999954 334 55779999999999999999999999999763
Q ss_pred -Ccc---hHHHHHHHHHHHhc
Q 012608 417 -PIW---HIASYLQAAALSAM 433 (460)
Q Consensus 417 -p~~---~~a~~~~g~~~~~~ 433 (460)
|++ .+.+.+++.++.++
T Consensus 406 G~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 406 GREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp CTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHH
Confidence 444 55566677766554
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00025 Score=55.47 Aligned_cols=56 Identities=4% Similarity=-0.234 Sum_probs=26.1
Q ss_pred HHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHH
Q 012608 369 DAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 424 (460)
Q Consensus 369 ~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~ 424 (460)
++|..++..++.+|...-..++.+|..+.++|+|+.|...++..+++.|+|.+|.-
T Consensus 61 ~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 61 LGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 34444444444444323444444444444444444444444444444444444443
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=9.4e-05 Score=71.97 Aligned_cols=72 Identities=10% Similarity=0.004 Sum_probs=62.5
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc--------CCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC----
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDA--------GTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIIS---- 416 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~---- 416 (460)
..+..+.++|.+|..+|+|++|+.+|++++++ .|+ ....++|+|.+|..+|++++|+..|++|+++.
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~l 416 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAH 416 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHc
Confidence 56788999999999999999999999999954 344 66789999999999999999999999999764
Q ss_pred -CcchH
Q 012608 417 -PIWHI 421 (460)
Q Consensus 417 -p~~~~ 421 (460)
|+++.
T Consensus 417 G~~Hp~ 422 (433)
T 3qww_A 417 GKDHPY 422 (433)
T ss_dssp CTTCHH
T ss_pred CCCChH
Confidence 55543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00066 Score=63.93 Aligned_cols=68 Identities=7% Similarity=-0.004 Sum_probs=44.8
Q ss_pred CCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC---CCccceeeeE------EeeCCeeEEEEEcCC
Q 012608 35 GEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR---NNRLTNLLGC------CCEGDERLLVAEYMP 105 (460)
Q Consensus 35 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~~iv~~~~~------~~~~~~~~lv~e~~~ 105 (460)
|.|....||+....+| .+++|+...... ..|+.+++.|. -|++++++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4444689999987677 899998765432 35666666662 2335555532 233567899999999
Q ss_pred CCCH
Q 012608 106 NETL 109 (460)
Q Consensus 106 g~sL 109 (460)
|.++
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00036 Score=68.02 Aligned_cols=73 Identities=15% Similarity=0.253 Sum_probs=51.8
Q ss_pred hcccCCCCCCeEEEEEEcC--------CcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEE
Q 012608 31 VSEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+..|+.|....||+....+ ++.+++|+.... .....+.+|..+++.|. +.-.+++++.+.. .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4567888889999998653 578999987432 22256778999999884 3334677776542 3899
Q ss_pred EcCCCCCH
Q 012608 102 EYMPNETL 109 (460)
Q Consensus 102 e~~~g~sL 109 (460)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99997554
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00037 Score=54.40 Aligned_cols=81 Identities=11% Similarity=-0.055 Sum_probs=69.6
Q ss_pred HHHHhHHhhhHHHhhCCHHH---HHHHHHHHhhcC-CCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKD---AIECYTQFIDAG-TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~---A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
....-++.|.++...++... +|..+...+..+ |...-...+.+|..++++|+|..|+..++..|++.|+|.+|.--
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~L 113 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 113 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 35677888888888877777 999999999987 64477899999999999999999999999999999999998876
Q ss_pred HHHHH
Q 012608 426 QAAAL 430 (460)
Q Consensus 426 ~g~~~ 430 (460)
+..+-
T Consensus 114 k~~i~ 118 (126)
T 1nzn_A 114 ERLID 118 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00059 Score=54.12 Aligned_cols=71 Identities=7% Similarity=-0.116 Sum_probs=37.0
Q ss_pred HHHHhhHHHHHHhcCCh---HHHHHHHHHhhhhCC-cchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 386 PTVYARRSLCYLMSDMP---QDALNDAMQAQIISP-IWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 386 ~~~~~~~~~~~~~~~~~---~~A~~~~~~a~~l~p-~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
....++.|-++.+..+. .++|..++..++-.| ..-+.+|.+|..++++|+|++|.++.+..|+++|+|..|
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA 113 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQV 113 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHH
Confidence 44444454555544332 235555555555555 344555555555555555555555555555555555444
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00089 Score=65.59 Aligned_cols=74 Identities=14% Similarity=0.082 Sum_probs=48.8
Q ss_pred hcccCCCCCCeEEEEEEcC-CcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCcc-ceeeeEEeeCCeeEEEEEcCCCCC
Q 012608 31 VSEHGEKAPNVVYKGKLEN-QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-TNLLGCCCEGDERLLVAEYMPNET 108 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~g~s 108 (460)
+..|+.|-...+|+....+ +..+++|+...... ..-...+|..+++.|...++ +++++.+. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4567788889999998755 57888998754321 11122589999999964444 67777663 2 35999999855
Q ss_pred H
Q 012608 109 L 109 (460)
Q Consensus 109 L 109 (460)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00033 Score=66.84 Aligned_cols=74 Identities=12% Similarity=0.179 Sum_probs=46.1
Q ss_pred hcccCCCCCCeEEEEEEcC---------CcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCc-cceeeeEEeeCCeeEEE
Q 012608 31 VSEHGEKAPNVVYKGKLEN---------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERLLV 100 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv 100 (460)
+..++.|....+|+....+ ++.+++|+...... .......|..+++.+...+ ++++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 4567888889999998643 26888998654321 1112467888888884323 55777654 2 3789
Q ss_pred EEcCCCCCH
Q 012608 101 AEYMPNETL 109 (460)
Q Consensus 101 ~e~~~g~sL 109 (460)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999998654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 460 | ||||
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 9e-42 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-41 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 8e-41 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-40 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-39 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-39 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 9e-39 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-38 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-37 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 9e-36 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-35 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-35 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 5e-35 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 8e-35 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-34 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-34 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-34 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 7e-34 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-33 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-33 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 9e-33 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-32 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-32 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 4e-32 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 6e-32 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-31 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 7e-31 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 8e-31 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-30 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 2e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 9e-30 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-29 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 6e-29 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-28 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 2e-28 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 6e-28 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 2e-27 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 5e-27 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 9e-27 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 9e-27 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 8e-26 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-25 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 4e-25 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-24 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-24 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 7e-24 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-23 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-23 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 2e-22 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-22 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 5e-22 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 6e-22 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 1e-21 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-21 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-20 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-19 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 1e-19 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-17 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-16 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 2e-15 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-14 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 3e-13 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 7e-07 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-06 | |
| d1p5qa1 | 170 | a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal d | 2e-04 | |
| d2fbna1 | 153 | a.118.8.1 (A:22-174) Putative 70 kda peptidylproly | 2e-04 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 6e-04 | |
| d1hh8a_ | 192 | a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF- | 7e-04 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 7e-04 | |
| d1kt1a1 | 168 | a.118.8.1 (A:254-421) FKBP51, C-terminal domain {M | 8e-04 | |
| d1elwa_ | 117 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 0.002 |
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (371), Expect = 9e-42
Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 12/249 (4%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
+V+ G N+ ++A+K A + F+EEA + +L + +L L G C E LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
E+M + L+ + + L + L + + + Y ++ DL A L E
Sbjct: 79 FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGE 136
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
+ ++S FG+ + D + S+ + + PE R + +S ++SFG L+ ++
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 216 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
S IP + + + + T + ++ + C + P +RP L
Sbjct: 197 SEGKIPYEN----RSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
Query: 276 VTALSPLQK 284
+ L+ + +
Sbjct: 253 LRQLAEIAE 261
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (369), Expect = 2e-41
Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VV GK Q +A+K + + +F+EEA+ + L + +L L G C + ++
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
EYM N L +L H + L + + +A+EY SK L+ DL A L ++
Sbjct: 78 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQF-LHRDLAARNCLVND 135
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
G ++S FGL + D + S+ + ++PPE L + + +S I++FG L+ ++
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
Query: 216 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
S +P + L ++ + C + ERP K L
Sbjct: 196 SLGKMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 276 VTAL 279
++ +
Sbjct: 252 LSNI 255
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (365), Expect = 8e-41
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 22/257 (8%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
V+ G ++AVK + + P FL EA + QL++ RL L + + ++
Sbjct: 28 EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
EYM N +L L + L + +A+ + + + ++ DL A IL +
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
+ +++ FGL + D + + + +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 216 SGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 270
+ IP + + + D+C E EL +L C + P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255
Query: 271 NPKSLVTALSPLQKETE 287
L + L TE
Sbjct: 256 TFDYLRSVLEDFFTATE 272
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 4e-40
Identities = 60/256 (23%), Positives = 103/256 (40%), Gaps = 12/256 (4%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
V+ G R+A+K P FL+EA+ + +LR+ +L L E + +V
Sbjct: 32 EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 89
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
EYM +L L ++ + + +A + Y ++ DL A IL E
Sbjct: 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGE 148
Query: 161 DGNPRLSTFGLMKNSRDGKSYSTN-----LAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
+ +++ FGL + D + + + +T PE GR T +S ++SFG LL +L
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208
Query: 216 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ +P + +R + + + L L +C + EP ERP + L
Sbjct: 209 TKGRVPYPG----MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264
Query: 276 VTALSPLQKETEVPSH 291
L TE
Sbjct: 265 QAFLEDYFTSTEPQYQ 280
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 1e-39
Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 20/251 (7%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL-L 99
V G ++AVK A + FL EA + QLR++ L LLG E L +
Sbjct: 22 DVMLGDYRG-NKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159
V EYM +L +L + L+ L + +A+EY ++ DL A +L
Sbjct: 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF-VHRDLAARNVLVS 137
Query: 160 EDGNPRLSTFGLMKN-SRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK 218
ED ++S FGL K S + + +T PE LR + + +S ++SFG LL ++ S
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197
Query: 219 HIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 273
+P + + D C + + C + RP+
Sbjct: 198 RVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFL 248
Query: 274 SLVTALSPLQK 284
L L ++
Sbjct: 249 QLREQLEHIKT 259
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 141 bits (356), Expect = 3e-39
Identities = 54/258 (20%), Positives = 109/258 (42%), Gaps = 12/258 (4%)
Query: 41 VVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159
+ E+M L +L + + L + ++ A+EY K ++ DL A L
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149
Query: 160 EDGNPRLSTFGLMKNSRDGKSYST-----NLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
E+ +++ FGL + + + +T PE L + + +S +++FG LL ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 215 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 274
+ P +DL + L + + + ++ L C Q+ P +RP+
Sbjct: 210 ATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 265
Query: 275 LVTALSPLQKETEVPSHV 292
+ A + +E+ + V
Sbjct: 266 IHQAFETMFQESSISDEV 283
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 140 bits (353), Expect = 9e-39
Identities = 59/292 (20%), Positives = 112/292 (38%), Gaps = 26/292 (8%)
Query: 13 FTLEQLKNATSGFAVENIVSEH------GEKAPNVVYKGKL----ENQRRIAVKRFNRMA 62
FT E A FA E +S G V G L + + +A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 63 WPDP-RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPM 121
R FL EA +GQ + + +L G + +++ E+M N +L
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 122 KWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY 181
+ ++ +A ++Y ++ DL A IL + + ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 182 STN---------LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR 232
T + +T PE ++ + T S ++S+G ++ +++S P + ++
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 233 NLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284
++ + D + L +L C Q + RP +V L + +
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 4e-38
Identities = 51/258 (19%), Positives = 102/258 (39%), Gaps = 20/258 (7%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100
VYKGK + + + F E + + R+ + +G + +V
Sbjct: 23 TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 81
Query: 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160
++ +L HL ET + + + AQ ++Y +K ++ DL + I E
Sbjct: 82 TQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSI-IHRDLKSNNIFLHE 139
Query: 161 DGNPRLSTFGL--MKNSRDGKSYSTNLAFTP----PEYLRT---GRVTPESVIYSFGTLL 211
D ++ FGL +K+ G L+ + PE +R + +S +Y+FG +L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 212 LDLLSGK----HIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267
+L++G+ +I + + R S + + RL + CL+ +
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRD 255
Query: 268 ERPNPKSLVTALSPLQKE 285
ERP ++ ++ L +
Sbjct: 256 ERPLFPQILASIELLARS 273
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (340), Expect = 3e-37
Identities = 55/272 (20%), Positives = 100/272 (36%), Gaps = 25/272 (9%)
Query: 11 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDP--- 66
R++ LE + I G+ VY + +++ +A+K +
Sbjct: 1 RQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE 50
Query: 67 RQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMR 126
Q E LR+ + L G + L+ EY P T+ + L
Sbjct: 51 HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRT 108
Query: 127 LRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-- 184
+ LA AL YC SK ++ D+ +L G +++ FG ++ + +
Sbjct: 109 ATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGT 167
Query: 185 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244
L + PPE + + ++S G L + L GK ++ R + +E
Sbjct: 168 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEF 221
Query: 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLV 276
F D L SR L++ P +RP + ++
Sbjct: 222 TFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 9e-36
Identities = 55/268 (20%), Positives = 100/268 (37%), Gaps = 30/268 (11%)
Query: 41 VVYKGKLENQ---RRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V KG + + + +AVK A + L EA + QL N + ++G C E +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155
+LV E L K+L + +K + +V ++ ++Y ++ DL A
Sbjct: 81 SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNF-VHRDLAARN 137
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFG 208
+L ++S FGL K R ++Y + + PE + + + +S ++SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 209 TLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263
L+ + S P S ++ C E+ L + C
Sbjct: 198 VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWT 248
Query: 264 YEPRERPNPKSLVTALSPLQKETEVPSH 291
Y+ RP ++ L + H
Sbjct: 249 YDVENRPGFAAVELRLRNYYYDVVNEGH 276
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (329), Expect = 2e-35
Identities = 56/265 (21%), Positives = 107/265 (40%), Gaps = 36/265 (13%)
Query: 41 VVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE 93
+VY+G E + R+A+K N A + +FL EA + + + + LLG +
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 94 GDERLLVAEYMPNETLAKHLFHW--------ETHPMKWAMRLRVVLHLAQALEYCTSKGR 145
G L++ E M L +L P + +++ +A + Y +
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF 154
Query: 146 ALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVT 199
++ DL A + ED ++ FG+ ++ + Y + + PE L+ G T
Sbjct: 155 -VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 200 PESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254
S ++SFG +L ++ + P L + + L D+C + L
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 264
Query: 255 VRLASRCLQYEPRERPNPKSLVTAL 279
L C QY P+ RP+ +++++
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (329), Expect = 4e-35
Identities = 52/277 (18%), Positives = 98/277 (35%), Gaps = 44/277 (15%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
VV+K + +A K + P Q + E + + + + + G E
Sbjct: 21 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158
+ E+M +L + L + + + +V + + + L Y K + ++ D+ IL
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS 216
+ G +L FG+ D + S ++ PE L+ + +S I+S G L+++
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 217 GKH-IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT----------------------- 252
G++ IPP A +L Q+ D+ G
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258
Query: 253 --------------ELVRLASRCLQYEPRERPNPKSL 275
E ++CL P ER + K L
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 130 bits (328), Expect = 5e-35
Identities = 48/243 (19%), Positives = 85/243 (34%), Gaps = 14/243 (5%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
VY + + N +A+K+ + + ++E R + +LR+ GC
Sbjct: 30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156
LV EY H P++ V Q L Y S ++ D+ A I
Sbjct: 90 AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNI 146
Query: 157 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT---GRVTPESVIYSFGTLLLD 213
L E G +L FG S+ + PE + G+ + ++S G ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 214 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 273
L K + Q + + G +++ CLQ P++RP +
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSE 262
Query: 274 SLV 276
L+
Sbjct: 263 VLL 265
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 8e-35
Identities = 47/255 (18%), Positives = 88/255 (34%), Gaps = 28/255 (10%)
Query: 41 VVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97
K + + + + K + M + + + E + +L++ + +
Sbjct: 19 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 78
Query: 98 LL--VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH---- 149
L V EY LA + E + LRV+ L AL+ C + +
Sbjct: 79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138
Query: 150 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIY 205
DL + D N +L FGL + S++ TP PE + +S I+
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 198
Query: 206 SFGTLLLDLLSGKH----IPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261
S G LL +L + IR+ + + + EL + +R
Sbjct: 199 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD---------ELNEIITRM 249
Query: 262 LQYEPRERPNPKSLV 276
L + RP+ + ++
Sbjct: 250 LNLKDYHRPSVEEIL 264
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 129 bits (324), Expect = 1e-34
Identities = 61/284 (21%), Positives = 105/284 (36%), Gaps = 50/284 (17%)
Query: 41 VVYKGKL------ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCE 93
V++ + E +AVK A D F EA + + N + LLG C
Sbjct: 28 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87
Query: 94 GDERLLVAEYMPNETLAKHLFHWETH----------------------PMKWAMRLRVVL 131
G L+ EYM L + L H P+ A +L +
Sbjct: 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147
Query: 132 HLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------L 185
+A + Y + + ++ DL L E+ +++ FGL +N Y + +
Sbjct: 148 QVAAGMAYLSERKF-VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206
Query: 186 AFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDS 240
+ PPE + R T ES ++++G +L ++ S P + +RD N+ ++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284
C EL L C P +RP+ S+ L + +
Sbjct: 267 CPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 301
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (324), Expect = 1e-34
Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 26/262 (9%)
Query: 41 VVYKGKLENQRR----IAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
VY G L + AVK NR+ + QFL E + + + +LLG C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 96 ER-LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154
L+V YM + L ++ ETH + L +A+ +++ SK ++ DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF-VHRDLAAR 159
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPPEYLRTGRVTPESVIYS 206
+ DE +++ FGL ++ D + S + + + E L+T + T +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 207 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQ---FTDDDGTELVRLASRCLQ 263
FG LL +L++ P D N +T L+G+ + L + +C
Sbjct: 220 FGVLLWELMTRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 272
Query: 264 YEPRERPNPKSLVTALSPLQKE 285
+ RP+ LV+ +S +
Sbjct: 273 PKAEMRPSFSELVSRISAIFST 294
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (321), Expect = 2e-34
Identities = 45/256 (17%), Positives = 88/256 (34%), Gaps = 15/256 (5%)
Query: 30 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 88
I+ E G+ A VYK + E A K + + + ++ E + + + LL
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 89 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 148
+ ++ E+ + + E P+ + V AL Y ++
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNK-IIH 133
Query: 149 HDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST----NLAFTPPEYLRT-----GRVT 199
DL A ILF DG+ +L+ FG+ + + PE +
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 200 PESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259
++ ++S G L+++ + PP H L+ + L++ +
Sbjct: 194 YKADVWSLGITLIEMAEIE--PPHHELNPM-RVLLKIAKSEPPTLAQPSRWSSNFKDFLK 250
Query: 260 RCLQYEPRERPNPKSL 275
+CL+ R L
Sbjct: 251 KCLEKNVDARWTTSQL 266
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (318), Expect = 7e-34
Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 28/255 (10%)
Query: 41 VVYKGKL---ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
V +G + Q +A+K + D + + EA+ + QL N + L+G C + +
Sbjct: 24 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156
+LV E L K L + + ++ ++ ++Y K ++ DL A +
Sbjct: 83 LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNF-VHRDLAARNV 140
Query: 157 LFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSFGT 209
L ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200
Query: 210 LLLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 264
+ + LS P + I C EL L S C Y
Sbjct: 201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIY 251
Query: 265 EPRERPNPKSLVTAL 279
+ +RP+ ++ +
Sbjct: 252 KWEDRPDFLTVEQRM 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (316), Expect = 1e-33
Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 15/272 (5%)
Query: 12 EFTLEQLKNATSGFAVEN---IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPR 67
E LE+L++ S + + G+ A VY + + +A+++ N P
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 68 QFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRL 127
+ E + + +N + N L GDE +V EY+ +L + M
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIA 119
Query: 128 RVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF 187
V QALE+ S ++ D+ + IL DG+ +L+ FG +S + +
Sbjct: 120 AVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178
Query: 188 TP----PEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE 243
TP PE + P+ I+S G + ++++ G+ PP + +R + T+ E
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLNENPLRALY-LIATNGTPE 235
Query: 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
Q + +RCL + +R + K L
Sbjct: 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 3e-33
Identities = 54/275 (19%), Positives = 98/275 (35%), Gaps = 41/275 (14%)
Query: 41 VVYKGKLENQRR------IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNR-LTNLLGCCC 92
V + +AVK A R+ + E + + QL ++ + NLLG C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 93 EGDERLLVAEYMPNETLAKHLF---------------------HWETHPMKWAMRLRVVL 131
L+ EY L +L + + + + L
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 132 HLAQALEYCTSKGRALYH-DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------ 184
+A+ +E+ K H DL A +L ++ FGL ++ +Y
Sbjct: 172 QVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 229
Query: 185 LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244
+ + PE L G T +S ++S+G LL ++ S P + D N L + +
Sbjct: 230 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKM 286
Query: 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVTAL 279
E+ + C ++ R+RP+ +L + L
Sbjct: 287 DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (311), Expect = 9e-33
Identities = 56/270 (20%), Positives = 105/270 (38%), Gaps = 33/270 (12%)
Query: 41 VVYKGKLEN---QRRIAVKRFNRMAWPDP-RQFLEEARSVGQLRNNR-LTNLLGCCCEGD 95
V K +++ + A+KR A D R F E + +L ++ + NLLG C
Sbjct: 25 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84
Query: 96 ERLLVAEYMPNETLAKHL--------------FHWETHPMKWAMRLRVVLHLAQALEYCT 141
L EY P+ L L + + L +A+ ++Y +
Sbjct: 85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144
Query: 142 SKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRV 198
K ++ DL A IL E+ +++ FGL + + + + E L
Sbjct: 145 QKQF-IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203
Query: 199 TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG---QFTDDDGTELV 255
T S ++S+G LL +++S P L + +G + + E+
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGGTPY-------CGMTCAELYEKLPQGYRLEKPLNCDDEVY 256
Query: 256 RLASRCLQYEPRERPNPKSLVTALSPLQKE 285
L +C + +P ERP+ ++ +L+ + +E
Sbjct: 257 DLMRQCWREKPYERPSFAQILVSLNRMLEE 286
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (310), Expect = 1e-32
Identities = 44/259 (16%), Positives = 97/259 (37%), Gaps = 19/259 (7%)
Query: 41 VVYKGKL-----ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
VYKG + + +A+K P ++ L+EA + + N + LLG C
Sbjct: 24 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154
+L+ + MP L + + L + +A+ + Y + ++ DL A
Sbjct: 84 TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL-VHRDLAAR 140
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESVIYSFG 208
+L + +++ FGL K + + + E + T +S ++S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 209 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRE 268
+ +L++ P D I + + + ++ + +C +
Sbjct: 201 VTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256
Query: 269 RPNPKSLVTALSPLQKETE 287
RP + L+ S + ++ +
Sbjct: 257 RPKFRELIIEFSKMARDPQ 275
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 2e-32
Identities = 51/260 (19%), Positives = 102/260 (39%), Gaps = 19/260 (7%)
Query: 41 VVYKGKLEN-----QRRIAVKRFNRMAWPDPR-QFLEEARSVGQLRNNRLTNLLGCCCEG 94
VYKG L+ + +A+K R FL EA +GQ ++ + L G +
Sbjct: 22 EVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY 81
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154
+++ EYM N + + ++ +A ++Y + + DL A
Sbjct: 82 KPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV-HRDLAAR 139
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYSF 207
IL + + ++S FGL + D + + +T PE + + T S ++SF
Sbjct: 140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 199
Query: 208 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267
G ++ ++++ P + + + + D + + +L +C Q E
Sbjct: 200 GIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERA 255
Query: 268 ERPNPKSLVTALSPLQKETE 287
RP +V+ L L + +
Sbjct: 256 RRPKFADIVSILDKLIRAPD 275
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 4e-32
Identities = 53/276 (19%), Positives = 96/276 (34%), Gaps = 34/276 (12%)
Query: 41 VVYKGKL------ENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNR-LTNLLGCCC 92
V + + +AVK A R+ + E + + L N+ + NLLG C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 93 EGDERLLVAEYMPNETLAKHLFHW----------------ETHPMKWAMRLRVVLHLAQA 136
G L++ EY L L + + L +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 137 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPP 190
+ + SK ++ DL A IL ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASKNC-IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 191 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250
E + T ES ++S+G L +L S P + D + +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG---MPVDSKFYKMIKEGFRMLSPEHA 273
Query: 251 GTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286
E+ + C +P +RP K +V + E+
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (303), Expect = 6e-32
Identities = 46/247 (18%), Positives = 92/247 (37%), Gaps = 17/247 (6%)
Query: 41 VVYKGKL-ENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97
VYKG E +A ++ + ++F EEA + L++ + +
Sbjct: 24 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83
Query: 98 ----LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH-DLN 152
+LV E M + TL +L MK + + + L++ ++ + H DL
Sbjct: 84 KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141
Query: 153 AYRILF-DEDGNPRLSTFGLMKNSRDGKSYST--NLAFTPPEYLRTGRVTPESVIYSFGT 209
I G+ ++ GL R + + F PE + +Y+FG
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200
Query: 210 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRER 269
+L++ + ++ P S + + + +T F E+ + C++ ER
Sbjct: 201 CMLEMATSEY-PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 257
Query: 270 PNPKSLV 276
+ K L+
Sbjct: 258 YSIKDLL 264
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 122 bits (306), Expect = 1e-31
Identities = 54/290 (18%), Positives = 98/290 (33%), Gaps = 21/290 (7%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
VV++ A K D +E +++ LR+ L NL + +E ++
Sbjct: 41 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF- 158
+ E+M L + + E + M + + + + L + ++ DL I+F
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFT 158
Query: 159 -DEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+L FGL + +S F PE V + ++S G L L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218
Query: 215 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 274
LSG P + D ++ + + L +P R
Sbjct: 219 LSGL--SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 276
Query: 275 L-----VTALSPLQKETEVPSHVLMGIPHS------ASVSPLSPLGEACS 313
+T + +++++PS I S A PL PLG +
Sbjct: 277 ALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISN 326
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 7e-31
Identities = 50/257 (19%), Positives = 90/257 (35%), Gaps = 20/257 (7%)
Query: 41 VVYKGKLE----NQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCE 93
VV +G+ + +AVK P F+ E ++ L + L L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
+ +V E P +L R + +A+ + Y SK ++ DL A
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN-------LAFTPPEYLRTGRVTPESVIYS 206
+L ++ FGLM+ + A+ PE L+T + S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 207 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 266
FG L ++ + P L + L + +D ++ + +C ++P
Sbjct: 200 FGVTLWEMFTYGQEPWI---GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 256
Query: 267 RERPNPKSLVTALSPLQ 283
+RP +L L Q
Sbjct: 257 EDRPTFVALRDFLLEAQ 273
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 8e-31
Identities = 52/263 (19%), Positives = 99/263 (37%), Gaps = 27/263 (10%)
Query: 41 VVYKGKLENQRR----IAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGD 95
V++G + +A+K R+ FL+EA ++ Q + + L+G E +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155
++ E L + + + A + L+ AL Y SK ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF-VHRDIAARN 138
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEY-----LRTGRVTPESVIYSFGTL 210
+L + +L FGL + D Y + P ++ + R T S ++ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 211 LLDLLSGKHIP-----PSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 249
Query: 266 PRERPNPKSLVTALSPLQKETEV 288
P RP L LS + +E +
Sbjct: 250 PSRRPRFTELKAQLSTILEEEKA 272
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (295), Expect = 1e-30
Identities = 43/288 (14%), Positives = 90/288 (31%), Gaps = 50/288 (17%)
Query: 41 VVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEA--RSVGQLRNNRLTNLLGCCCEGD--- 95
V++GK +AVK F+ + R + EA LR+ + + + +
Sbjct: 18 EVWRGKWRG-EEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73
Query: 96 -ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH----- 149
+ LV++Y + +L +L + + +++ L A L + +
Sbjct: 74 TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 150 --DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSY----STNLAFTP----PEYLRT---- 195
DL + IL ++G ++ GL + T PE L
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190
Query: 196 --GRVTPESVIYSFGTLLLDLLSGKHIPPSHAL----------------DLIRDRNLQML 237
+ IY+ G + ++ I H ++ + Q L
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 250
Query: 238 TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285
+ + + + ++ C R + LS L ++
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 2e-30
Identities = 46/244 (18%), Positives = 76/244 (31%), Gaps = 15/244 (6%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
V + +AVK + D P +E L + + G EG+ +
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158
L EY L + M R L + Y G + D+ +L
Sbjct: 80 LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIGI-THRDIKPENLLL 136
Query: 159 DEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVTPESV-IYSFGTLL 211
DE N ++S FGL R L + PE L+ E V ++S G +L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 212 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 271
+L+G+ + + + + D L+ + L P R
Sbjct: 197 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARIT 253
Query: 272 PKSL 275
+
Sbjct: 254 IPDI 257
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 116 bits (292), Expect = 9e-30
Identities = 45/241 (18%), Positives = 81/241 (33%), Gaps = 10/241 (4%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
VV++ R K N D E + QL + +L NL + E +L
Sbjct: 44 VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103
Query: 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD 159
+ E++ L + E + M A + + + L++ ++ D+ I+ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSI-VHLDIKPENIMCE 161
Query: 160 --EDGNPRLSTFGLMKNSRDGKS---YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDL 214
+ + ++ FGL + + F PE + V + +++ G L L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221
Query: 215 LSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKS 274
LSG P D + D + E LQ EPR+R
Sbjct: 222 LSGL--SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHD 279
Query: 275 L 275
Sbjct: 280 A 280
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 113 bits (284), Expect = 6e-29
Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 11/242 (4%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ-FLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
V + Q+ +A+K + A E + ++++ + L G
Sbjct: 24 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA--LYHDLNAYRI 156
L+ + + L + E R++ + A++Y G N
Sbjct: 84 LIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141
Query: 157 LFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRVTPESVIYSFGTLLLD 213
DED +S FGL K G ST + PE L + +S G +
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201
Query: 214 LLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPK 273
LL G PP + + + + + + + DD ++ +P +R +
Sbjct: 202 LLCGY--PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 259
Query: 274 SL 275
Sbjct: 260 QA 261
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 113 bits (285), Expect = 6e-29
Identities = 38/252 (15%), Positives = 92/252 (36%), Gaps = 11/252 (4%)
Query: 30 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLL 88
I + G +V++ +++ K ++ D +E + R+ + +L
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIARHRNILHLH 67
Query: 89 GCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALY 148
+E +++ E++ + + + + + + V + +AL++ S +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIG-H 125
Query: 149 HDLNAYRILFDEDGNPR--LSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESV 203
D+ I++ + + FG + + G ++ + PE + V+ +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 204 IYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQ 263
++S GTL+ LLSG P A + M + + + + E + R L
Sbjct: 186 MWSLGTLVYVLLSGI--NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLV 243
Query: 264 YEPRERPNPKSL 275
E + R
Sbjct: 244 KERKSRMTASEA 255
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 1e-28
Identities = 41/253 (16%), Positives = 81/253 (32%), Gaps = 19/253 (7%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
V + L R A+K + E + +L + L + ++
Sbjct: 23 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156
Y N L K++ + ALEY K ++ DL I
Sbjct: 83 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENI 139
Query: 157 LFDEDGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTL 210
L +ED + +++ FG K S+ + PE L S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 211 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 270
+ L++G + LI + +++ E F + + L + L + +R
Sbjct: 200 IYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKARDLVEKLLVLDATKRL 253
Query: 271 NPKSLVTALSPLQ 283
+ +
Sbjct: 254 GCEEMEGYGPLKA 266
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 111 bits (278), Expect = 2e-28
Identities = 49/245 (20%), Positives = 86/245 (35%), Gaps = 20/245 (8%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTNLLGCCCE--- 93
V+ + L R +AVK DP +F EA++ L + + +
Sbjct: 22 EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81
Query: 94 -GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLN 152
G +V EY+ TL + PM + V+ QAL + G ++ D+
Sbjct: 82 AGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG-IIHRDVK 138
Query: 153 AYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNL-------AFTPPEYLRTGRVTPESVIY 205
I+ ++ FG+ + D + T + PE R V S +Y
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198
Query: 206 SFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYE 265
S G +L ++L+G+ PP + + D + +L + + L
Sbjct: 199 SLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256
Query: 266 PRERP 270
P R
Sbjct: 257 PENRY 261
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 6e-28
Identities = 54/271 (19%), Positives = 95/271 (35%), Gaps = 33/271 (12%)
Query: 41 VVYKG------KLENQRRIAVKRFNR-MAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCC 92
V + K R +AVK + R + E + + + + + NLLG C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 93 E-GDERLLVAEYMPNETLAKHLFHWETH--------------PMKWAMRLRVVLHLAQAL 137
+ G +++ E+ L+ +L + + +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 138 EYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPPE 191
E+ S+ ++ DL A IL E ++ FGL ++ Y L + PE
Sbjct: 148 EFLASRK-CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 192 YLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251
+ T +S ++SFG LL ++ S P + D + D
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---GVKIDEEFCRRLKEGTRMRAPDYTT 263
Query: 252 TELVRLASRCLQYEPRERPNPKSLVTALSPL 282
E+ + C EP +RP LV L L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 108 bits (271), Expect = 2e-27
Identities = 45/255 (17%), Positives = 82/255 (32%), Gaps = 25/255 (9%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDP---------RQFLEEARSVGQLRNNRLT-NLLG 89
VV + + AVK + L+E + ++ + L
Sbjct: 18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77
Query: 90 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYH 149
LV + M L +L E + +++ L + + +
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIV-HR 134
Query: 150 DLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST---NLAFTPPEYLRTGRV------TP 200
DL IL D+D N +L+ FG G+ ++ PE +
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194
Query: 201 ESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260
E ++S G ++ LL+G PP + + M + DD + L SR
Sbjct: 195 EVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 261 CLQYEPRERPNPKSL 275
L +P++R +
Sbjct: 253 FLVVQPQKRYTAEEA 267
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 108 bits (271), Expect = 5e-27
Identities = 43/237 (18%), Positives = 86/237 (36%), Gaps = 18/237 (7%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ---FLEEARSVGQLRNNRLTNLLGCCCEGDE 96
V+ + N R A+K + +Q +E + + + + + G + +
Sbjct: 19 RVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ 78
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156
++ +Y+ L ++ + + ALEY SK +Y DL I
Sbjct: 79 IFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENI 135
Query: 157 LFDEDGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
L D++G+ +++ FG K D + + PE + T +SFG L+ ++L
Sbjct: 136 LLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML 195
Query: 216 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT--ELVRLASRCLQYEPRERP 270
+G D N + L + ++ L SR + + +R
Sbjct: 196 AGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRL 244
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (269), Expect = 9e-27
Identities = 46/242 (19%), Positives = 84/242 (34%), Gaps = 22/242 (9%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDP----RQFLEEARSVGQLRNNRLTNLLGCCCEGD 95
V+ + + + A+K + +E+ + LT++ +
Sbjct: 17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76
Query: 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155
V EY+ L H+ H + + L++ SKG +Y DL
Sbjct: 77 NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGI-VYRDLKLDN 133
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVTPESVIYSFGTLL 211
IL D+DG+ +++ FG+ K + G + + T PE L + +SFG LL
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193
Query: 212 LDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEPRER 269
++L G+ ++ + L S E L + EP +R
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245
Query: 270 PN 271
Sbjct: 246 LG 247
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 108 bits (271), Expect = 9e-27
Identities = 47/240 (19%), Positives = 80/240 (33%), Gaps = 16/240 (6%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDP---RQFLEEARSVGQLRNNRLTN---LLGCCCE 93
VY + + + A+K ++ L E + + +
Sbjct: 19 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
D+ + + M L HL A + LE+ ++ +Y DL
Sbjct: 79 PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFV-VYRDLKP 135
Query: 154 YRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--LAFTPPEYLRTGR-VTPESVIYSFGTL 210
IL DE G+ R+S GL + K +++ + PE L+ G + +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195
Query: 211 LLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERP 270
L LL G H + + LT + + D EL L LQ + R
Sbjct: 196 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV---ELPDSFSPELRSLLEGLLQRDVNRRL 252
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 8e-26
Identities = 54/272 (19%), Positives = 94/272 (34%), Gaps = 35/272 (12%)
Query: 41 VVYKGKL--------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNR-LTNLLGC 90
V + ++AVK A D + E + + ++ + NLLG
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 91 CCEGDERLLVAEYMPNETLAKHLFHWETHP--------------MKWAMRLRVVLHLAQA 136
C + ++ EY L ++L + + +A+
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 137 LEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN------LAFTPP 190
+EY SK ++ DL A +L ED +++ FGL ++ Y + + P
Sbjct: 148 MEYLASKKC-IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 191 EYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250
E L T +S ++SFG LL ++ + P + L L +
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG----VPVEELFKLLKEGHRMDKPSNC 262
Query: 251 GTELVRLASRCLQYEPRERPNPKSLVTALSPL 282
EL + C P +RP K LV L +
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (259), Expect = 1e-25
Identities = 38/249 (15%), Positives = 77/249 (30%), Gaps = 19/249 (7%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ------FLEEARSVGQLRNNRLTNLLGCCCE 93
VV K + + A K + R+ E + ++++ + L
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNA 153
+ +L+ E + L E + + + + Y S A + DL
Sbjct: 85 KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKP 141
Query: 154 YRILFDEDGNPR----LSTFGLMKNSRDGKSYSTNL---AFTPPEYLRTGRVTPESVIYS 206
I+ + P+ + FGL G + F PE + + E+ ++S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 207 FGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEP 266
G + LLSG + + E ++ + R L +P
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLANVSAV--NYEFEDEYFSNTSALAKDFIRRLLVKDP 259
Query: 267 RERPNPKSL 275
++R +
Sbjct: 260 KKRMTIQDS 268
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (254), Expect = 4e-25
Identities = 50/248 (20%), Positives = 93/248 (37%), Gaps = 27/248 (10%)
Query: 41 VVYKGK-LENQRRIAVKRFNR------MAWPDPRQFLEEARSVGQLRNN--RLTNLLGCC 91
VY G + + +A+K + P+ + E + ++ + + LL
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 92 CEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 151
D +L+ E E ++ + + +A+ +C + G L+ D+
Sbjct: 79 ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDI 136
Query: 152 NAYRILFDED-GNPRLSTFGLMKNSRDG--KSYSTNLAFTPPEYLRTGRVTPESV-IYSF 207
IL D + G +L FG +D + ++PPE++R R S ++S
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 208 GTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPR 267
G LL D++ G P H ++IR + F +E L CL P
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPS 244
Query: 268 ERPNPKSL 275
+RP + +
Sbjct: 245 DRPTFEEI 252
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 100 bits (250), Expect = 2e-24
Identities = 40/284 (14%), Positives = 81/284 (28%), Gaps = 32/284 (11%)
Query: 29 NIVSEH-------GEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR 80
N+V H GE + V+++G L N +++A+K R + D Q +E R+ L
Sbjct: 1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA 58
Query: 81 N-NRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEY 139
+ N+ EG +LV + + L + ++
Sbjct: 59 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 140 CTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRDGKSYSTN---------- 184
K +Y D+ L + FG++K RD +
Sbjct: 117 IHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175
Query: 185 -LAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLT--DSC 241
+ + + + G + + L G + + ++ S
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235
Query: 242 LEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285
+ E + P+ L S + +
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 99 bits (248), Expect = 4e-24
Identities = 38/264 (14%), Positives = 79/264 (29%), Gaps = 24/264 (9%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERL 98
+Y G + +A+K Q E++ ++ + + C EGD +
Sbjct: 22 DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79
Query: 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158
+V E + LF++ + L + + +EY SK ++ D+ L
Sbjct: 80 MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF-IHRDVKPDNFLM 136
Query: 159 DEDGNPRL---STFGLMKNSRDGKSYSTN-----------LAFTPPEYLRTGRVTPESVI 204
L FGL K RD +++ + + +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196
Query: 205 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--SCLEGQFTDDDGTELVRLASRCL 262
S G +L+ G R + ++ S +E + C
Sbjct: 197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 256
Query: 263 QYEPRERPNPKSLVTAL-SPLQKE 285
++P+ L + ++
Sbjct: 257 SLRFDDKPDYSYLRQLFRNLFHRQ 280
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 99 bits (248), Expect = 7e-24
Identities = 39/271 (14%), Positives = 94/271 (34%), Gaps = 37/271 (13%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98
+V N+ R+A+K+ + ++ L E + + + R+ + +
Sbjct: 23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82
Query: 99 LVAEYMPNETLAKHLFHW-ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 157
+ Y+ + L+ +T + + + + L+Y S L+ DL +L
Sbjct: 83 MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV-LHRDLKPSNLL 141
Query: 158 FDEDGNPRLSTFGLMKNSRDGKSYST-------NLAFTPPEYLRTGRVTPESV-IYSFGT 209
+ + ++ FGL + + ++ + PE + + +S+ I+S G
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201
Query: 210 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE-------------------------G 244
+L ++LS + I P + L +L E
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261
Query: 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ + ++ + L + L + P +R +
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.4 bits (244), Expect = 1e-23
Identities = 46/268 (17%), Positives = 82/268 (30%), Gaps = 36/268 (13%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPD-----PRQFLEEARSVGQLRNNRLTNLLGCCCEG 94
VYK + + +A+K+ + R L E + + +L + + LL
Sbjct: 13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154
LV ++M + + + + + +L Q LEY + DL
Sbjct: 73 SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPN 129
Query: 155 RILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGT 209
+L DE+G +L+ FGL K+ T+ T P +++ G
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189
Query: 210 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE----------------------GQFT 247
+L +LL P + R + L E
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249
Query: 248 DDDGTELVRLASRCLQYEPRERPNPKSL 275
G +L+ L + P R
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 97.6 bits (242), Expect = 2e-23
Identities = 44/276 (15%), Positives = 95/276 (34%), Gaps = 33/276 (11%)
Query: 30 IVSEHGEKAPNVVYKGKLENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTNL 87
+ + GE VVYK + A+K+ + P + E + +L+++ + L
Sbjct: 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 88 LGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRAL 147
+LV E++ + L ++ +L L + YC + L
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR-VL 122
Query: 148 YHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP-----PEYLRTGRVTPES 202
+ DL +L + +G +++ FGL + T+ T + + + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 203 VIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG------------------ 244
I+S G + ++++G + P + R ++L +
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242
Query: 245 -----QFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
F + L S+ L+ +P +R K
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.6 bits (237), Expect = 2e-22
Identities = 48/242 (19%), Positives = 87/242 (35%), Gaps = 17/242 (7%)
Query: 41 VVYKGK-LENQRRIAVKRFNR---MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96
V + R A+K + +A + + E+R + R+ LT L D
Sbjct: 20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156
V EY L HL + A + ALEY S+ +Y D+ +
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSRDV-VYRDIKLENL 136
Query: 157 LFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTP----PEYLRTGRVTPESVIYSFGTLLL 212
+ D+DG+ +++ FGL K + TP PE L + G ++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 213 DLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNP 272
+++ G+ + + + + L E +F E L + L+ +P++R
Sbjct: 197 EMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 250
Query: 273 KS 274
Sbjct: 251 GP 252
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.8 bits (235), Expect = 4e-22
Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 20/249 (8%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCC----CEG 94
V + Q + A+K D + E + + ++
Sbjct: 27 KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81
Query: 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAY 154
L+V E + L + ++ + +A++Y S A + D+
Sbjct: 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA-HRDVKPE 140
Query: 155 RILFD---EDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGRVTPESVIYSFG 208
+L+ + +L+ FG K + S +T + PE L + ++S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200
Query: 209 TLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG--TELVRLASRCLQYEP 266
++ LL G S+ I + E + E+ L L+ EP
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP 260
Query: 267 RERPNPKSL 275
+R
Sbjct: 261 TQRMTITEF 269
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.5 bits (234), Expect = 5e-22
Identities = 53/272 (19%), Positives = 89/272 (32%), Gaps = 43/272 (15%)
Query: 41 VVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER-- 97
VVY+ KL ++ +A+K+ + D R E + + +L + + L E+
Sbjct: 35 VVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90
Query: 98 ----LLVAEYMPNETLAKHLFHWETH-PMKWAMRLRVVLHLAQALEYCTSKGRALYH-DL 151
LV +Y+P + + + L ++L Y S G + H D+
Sbjct: 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG--ICHRDI 148
Query: 152 NAYRILFDEDGNP-RLSTFGLMKNSRDGKSYSTNLAFT----PPEYLRTGRVTPESVIYS 206
+L D D +L FG K G+ + + P T ++S
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 207 FGTLLLDLLSGKHI----PPSHALDLI-------------------RDRNLQMLTDSCLE 243
G +L +LL G+ I L I + +
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
F E + L SR L+Y P R P
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.4 bits (231), Expect = 6e-22
Identities = 52/266 (19%), Positives = 99/266 (37%), Gaps = 33/266 (12%)
Query: 41 VVYKGK-LENQRRIAVK--RFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97
VVYK + +A+K R + P + E + +L + + LL ++
Sbjct: 17 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL 76
Query: 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 157
LV E++ ++ L K + + + + L Q L +C S R L+ DL +L
Sbjct: 77 YLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLL 134
Query: 158 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLL 212
+ +G +L+ FGL + T+ T P L + I+S G +
Sbjct: 135 INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA 194
Query: 213 DLLSGKHI-PPSHALDLIRD--RNLQMLTDSCLEGQFTDDD------------------- 250
++++ + + P +D + R L + G + D
Sbjct: 195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPP 254
Query: 251 -GTELVRLASRCLQYEPRERPNPKSL 275
+ L S+ L Y+P +R + K+
Sbjct: 255 LDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.0 bits (230), Expect = 1e-21
Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 36/281 (12%)
Query: 30 IVSEHGEKAPNVVYKGK--LENQRRIAVKRFNRMAWPD--PRQFLEEA---RSVGQLRNN 82
V+E GE A V+K + R +A+KR + P + E R + +
Sbjct: 11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70
Query: 83 RLTNLLGCCCEGDERLLVAEYMPNETLA----KHLFHWETHPMKWAMRLRVVLHLAQALE 138
+ L C + E + +L + ++ L + L+
Sbjct: 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130
Query: 139 YCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRT 195
+ S ++ DL IL G +L+ FGL + + ++ L + PE L
Sbjct: 131 FLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189
Query: 196 GRVTPESVIYSFGTLLLDLLSGKHI---------------------PPSHALDLIRDRNL 234
++S G + ++ K + D+ R
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ +F D L +CL + P +R + S
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.0 bits (230), Expect = 2e-21
Identities = 36/267 (13%), Positives = 82/267 (30%), Gaps = 33/267 (12%)
Query: 41 VVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97
V ++A+K+ R + ++ E R + +R+ + LL +
Sbjct: 33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92
Query: 98 LLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155
++ + + +V + + L Y + G + DL
Sbjct: 93 DDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII-HRDLKPGN 151
Query: 156 ILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAF--TPPEYLRTGRVTPESVIYSFGTLLLD 213
+ +ED ++ FGL + + + + P L R T I+S G ++ +
Sbjct: 152 LAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 211
Query: 214 LLSGKHI-------------------PPSHALDLIRDRNLQMLTDSCLE------GQFTD 248
+++GK + PP+ + ++ + E
Sbjct: 212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILT 271
Query: 249 DDGTELVRLASRCLQYEPRERPNPKSL 275
+ V L + L + +R
Sbjct: 272 NASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.1 bits (217), Expect = 4e-20
Identities = 40/267 (14%), Positives = 78/267 (29%), Gaps = 35/267 (13%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDER 97
V+K K E +A+KR + P L E + +L++ + L +
Sbjct: 17 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKL 76
Query: 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRIL 157
LV E+ + F + + + L + L +C S+ L+ DL +L
Sbjct: 77 TLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV-LHRDLKPQNLL 133
Query: 158 FDEDGNPRLSTFGLMKNSRDGKSYSTNLAFT-----PPEYLRTGRVTPESVIYSFGTLLL 212
+ +G +L+ FGL + + T P + ++S G +
Sbjct: 134 INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 193
Query: 213 DLLSGKHIP------------------------PSHALDLIRDRNLQMLTDSCLEGQFTD 248
+L + L + M +
Sbjct: 194 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP 253
Query: 249 DDGTELVRLASRCLQYEPRERPNPKSL 275
L L+ P +R + +
Sbjct: 254 KLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 87.6 bits (216), Expect = 1e-19
Identities = 47/292 (16%), Positives = 94/292 (32%), Gaps = 49/292 (16%)
Query: 30 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFN--RMAWPDPRQFLEEARSVGQLRNNRLTN 86
+++ G+ V+K + + +++A+K+ P L E + + L++ + N
Sbjct: 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73
Query: 87 LLGCCCEGDER--------LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALE 138
L+ C LV ++ ++ + RV+ L L
Sbjct: 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLNGLY 131
Query: 139 YCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN--------LAFTPP 190
Y L+ D+ A +L DG +L+ FGL + K+ N L + PP
Sbjct: 132 YIHRNK-ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190
Query: 191 EYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249
E L R P ++ G ++ ++ + I + Q+ E D
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250
Query: 250 DGT--------------------------ELVRLASRCLQYEPRERPNPKSL 275
+ + L + L +P +R +
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 87.9 bits (217), Expect = 1e-19
Identities = 43/236 (18%), Positives = 78/236 (33%), Gaps = 14/236 (5%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQ---FLEEARSVGQLRNNRLTNLLGCCCEGDE 96
V K E+ A+K ++ +Q L E R + + L L +
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156
+V EY+ + HL + EY S +Y DL +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENL 172
Query: 157 LFDEDGNPRLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLL 215
L D+ G +++ FG K + + PE + + ++ G L+ ++
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 216 SGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPN 271
+G PP A I+ + +F ++L L LQ + +R
Sbjct: 233 AGY--PPFFADQPIQ----IYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFG 282
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.3 bits (197), Expect = 3e-17
Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 21/246 (8%)
Query: 41 VVYKGKL----ENQRRIAVKRFNRMAWPD----PRQFLEEARSVGQLRNNRLTNLLGCCC 92
V+ + + + A+K + E + + +R + L
Sbjct: 39 KVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF 98
Query: 93 EGDERLLVA-EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDL 151
+ + +L + +Y+ L HL E V + ALE+ G +Y D+
Sbjct: 99 QTETKLHLILDYINGGELFTHLSQRERFTEHEVQI--YVGEIVLALEHLHKLG-IIYRDI 155
Query: 152 NAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRT-------GRVTPESVI 204
IL D +G+ L+ FGL K ++ EY+
Sbjct: 156 KLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDW 215
Query: 205 YSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQY 264
+S G L+ +LL+G P + E + + L R L
Sbjct: 216 WSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMK 273
Query: 265 EPRERP 270
+P++R
Sbjct: 274 DPKKRL 279
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.6 bits (190), Expect = 3e-16
Identities = 41/278 (14%), Positives = 83/278 (29%), Gaps = 33/278 (11%)
Query: 30 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTN 86
+S G A V + R+AVK+ +R + ++ E R + +++ +
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 87 LLGCCCEGDERLLVAEYMPNETLAKHLFH--WETHPMKWAMRLRVVLHLAQALEYCTSKG 144
LL + L + + + ++ + + L+Y S
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 145 RALYHDLNAYRILFDEDGNPRLSTFGL--MKNSRDGKSYSTNLAFTPPEYLRTGRVTPES 202
+ DL + +ED ++ FGL + +T P L
Sbjct: 142 II-HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 203 VIYSFGTLLLDLLSGKH-------------------IPPSHALDLIRDRNLQMLTDSCLE 243
I+S G ++ +LL+G+ P + L I + + S +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260
Query: 244 ------GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
V L + L + +R
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 74.9 bits (183), Expect = 2e-15
Identities = 39/276 (14%), Positives = 88/276 (31%), Gaps = 50/276 (18%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERL 98
V++ + N ++ VK + ++ E + + LR + L + R
Sbjct: 50 EVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 99 --LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156
LV E++ N + + + + +AL+YC S G + D+ + +
Sbjct: 107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIM-HRDVKPHNV 160
Query: 157 LFDEDGNP-RLSTFGLMKNSRDGKSYS----TNLAFTPPEYLRTGRVTPESVIYSFGTLL 211
+ D + RL +GL + G+ Y+ + P + ++S G +L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 212 LDLLSGKH--------------------------------IPPSHALDLIRDRNLQMLTD 239
++ K I + I R+ + +
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 240 SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ + E + + L+Y+ + R +
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.6 bits (174), Expect = 3e-14
Identities = 41/299 (13%), Positives = 87/299 (29%), Gaps = 65/299 (21%)
Query: 41 VVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99
V+ K + N +A+K R +E + + ++ + T +LL
Sbjct: 28 TVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86
Query: 100 VAEYMPNETLAKHLFHWETHPMKW--------------AMRLRVVLHLAQALEYCTSKGR 145
+ +E ++ L L+Y +
Sbjct: 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146
Query: 146 ALYHDLNAYRILFDEDGNP------RLSTFGLMKNSRDGKSYS-TNLAFTPPEYLRTGRV 198
++ D+ +L + +P +++ G + + S + PE L
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206
Query: 199 TPESVIYSFGTLLLDLLSGKHI-------------------------PPSHALDLIRDRN 233
+ I+S L+ +L++G + PS+ L +
Sbjct: 207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR 266
Query: 234 LQMLTDSCLEG-----------------QFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ L +F+ D+ E+ S LQ +PR+R + L
Sbjct: 267 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.4 bits (166), Expect = 3e-13
Identities = 39/294 (13%), Positives = 88/294 (29%), Gaps = 54/294 (18%)
Query: 30 IVSEHGEKAPNVVYKGK-LENQRRIAVKRFNR--MAWPDPRQFLEEARSVGQLRNNRLTN 86
+ G A +V R +A+K+ +R ++ E + + + + +
Sbjct: 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 87 LLGCCC------EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYC 140
LL E + LV E M + ++ + +++
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGIKHL 135
Query: 141 TSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYSTN---LAFTPPEYLRTGR 197
S G ++ DL I+ D ++ FGL + + + + PE +
Sbjct: 136 HSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 198 VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLE-------------- 243
I+S G ++ +++ K + P ++ ++ L C E
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 244 ----------------------GQFTDDDGTELVRLASRCLQYEPRERPNPKSL 275
+ ++ L S+ L +P +R +
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 47.7 bits (112), Expect = 7e-07
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K++G+ F + +A CY + I + Y R+LCYL P+ AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 450
+ A + M +EA L+ +L
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 102
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 46.7 bits (110), Expect = 1e-06
Identities = 17/147 (11%), Positives = 37/147 (25%), Gaps = 25/147 (17%)
Query: 41 VVYKGKLENQRRIAVKRFN----------RMAWPDPRQFLEEARSVGQLRNNRLTNLLGC 90
V+ E VK F A + L L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74
Query: 91 CC----EGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRA 146
+ ++ E + E + ++ V+ + + + +
Sbjct: 75 AVPKVYAWEGNAVLMELI---------DAKELYRVRVENPDEVLDMILEEVAKFYHR-GI 124
Query: 147 LYHDLNAYRILFDEDGNPRLSTFGLMK 173
++ DL+ Y +L + + F
Sbjct: 125 VHGDLSQYNVLVS-EEGIWIIDFPQSV 150
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 170 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.0 bits (92), Expect = 2e-04
Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 15/126 (11%)
Query: 340 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFIDAGTMVS------------- 385
S++M +++ E K++G V F++ K A+ Y + + S
Sbjct: 1 SWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQAL 60
Query: 386 -PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 444
+ ++C+L A+ +A + + A A+ A+ +
Sbjct: 61 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQ 120
Query: 445 EGTTLE 450
+ L
Sbjct: 121 KVLQLY 126
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} Length = 153 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Score = 39.6 bits (91), Expect = 2e-04
Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 16/127 (12%)
Query: 340 SFQMWTDQ-MQETLNSKKKGDVAFRQKDLKDAIECYTQF---------------IDAGTM 383
+ ++ +Q + K++G+ F++ ++ +AI Y + +D
Sbjct: 5 IYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKN 64
Query: 384 VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVAL 443
+ + + CY + A++ A + I A Y A G EA+ L
Sbjct: 65 IEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENL 124
Query: 444 KEGTTLE 450
+ +L
Sbjct: 125 YKAASLN 131
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 6e-04
Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 1/110 (0%)
Query: 336 ANELSFQMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLC 395
A + + + V + Q + AI+ Y + I+ P Y +
Sbjct: 222 AVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANA 280
Query: 396 YLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+A + A + P + A G EA ++
Sbjct: 281 LKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRK 330
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} Length = 192 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.3 bits (88), Expect = 7e-04
Identities = 12/92 (13%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALN 407
+ E ++ +G +A +KD K A++ ++ D + Y + +A
Sbjct: 2 LVEAISLWNEGVLAADKKDWKGALDAFSAVQDP----HSRICFNIGCMYTILKNMTEAEK 57
Query: 408 DAMQAQIISPIWHIASYLQAAALSAMGMENEA 439
++ +A + + + A
Sbjct: 58 AFTRSINRDKHLAVAYFQRGMLYYQTEKYDLA 89
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (86), Expect = 7e-04
Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 1/97 (1%)
Query: 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALND 408
++ L K+ G+ A+++KD A++ Y + + + T ++ Y
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 409 AMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKE 445
+A + A A + +G + K+
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKD 97
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} Length = 168 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Score = 38.0 bits (87), Expect = 8e-04
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 15/126 (11%)
Query: 340 SFQMWTDQMQETLNS-KKKGDVAFRQKDLKDAIECYTQFI--------------DAGTMV 384
S++M T + E K+KG V F+ A+ Y + + A
Sbjct: 3 SWEMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESF 62
Query: 385 SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALK 444
+ ++CYL A+ +A + Y + A M A+ +
Sbjct: 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFE 122
Query: 445 EGTTLE 450
+ +
Sbjct: 123 KVLEVN 128
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 117 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.8 bits (81), Expect = 0.002
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 355 KKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQI 414
K+KG+ A ++ DA++CY++ I RS Y Q A D +
Sbjct: 7 KEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYS-NRSAAYAKKGDYQKAYEDGCKTVD 65
Query: 415 ISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLE 450
+ P W +AAAL + EA+ +EG E
Sbjct: 66 LKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 101
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 460 | |||
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.92 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.83 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.8 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.79 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.77 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.76 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.73 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.71 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.71 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.67 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.67 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.63 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.63 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.6 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.59 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.57 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.56 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.55 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.54 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.44 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.43 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.43 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.38 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.28 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.28 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.27 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.24 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.24 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.21 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.18 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.18 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.17 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.14 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.11 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.1 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.0 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 98.99 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.97 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.96 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.91 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.86 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.86 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.82 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.78 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.65 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.6 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.51 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.47 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.46 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.39 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.32 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.26 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.25 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.2 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 98.14 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.03 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 98.0 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.82 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.72 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.65 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.4 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.33 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.18 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 89.51 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 88.54 | |
| d1wr0a1 | 77 | Vacuolar sorting protein 4b (VPS4B, SKD1 protein) | 85.89 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 81.51 |
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-56 Score=410.43 Aligned_cols=244 Identities=20% Similarity=0.273 Sum_probs=211.6
Q ss_pred ccchhcccCCCCCCeEEEEE-EcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGK-LENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
+|+++++||+|+||+||+|. ..+|+.||||+++.......+.+.+|+.++++++||||+++++++..++..|+|||||+
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~ 100 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence 59999999999999999999 45799999999987666677889999999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----CCc
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----KSY 181 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~~~ 181 (460)
||+|.+++.. +.+++..+..++.||+.||.|||++| |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 101 gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 176 (293)
T d1yhwa1 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (293)
T ss_dssp TCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC-CcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence 9999998753 56999999999999999999999999 999999999999999999999999999875432 355
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASRC 261 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 261 (460)
.||+.|+|||++.+..++.++|||||||++|+|+||..||.+............ ...+....+..+++++.+||.+|
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~li~~~ 253 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLNRC 253 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---HCSCCCSSGGGSCHHHHHHHHHH
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHh---CCCCCCCCcccCCHHHHHHHHHH
Confidence 789999999999998999999999999999999999999976543222111111 11112234556789999999999
Q ss_pred cccCCCCCCChhHHHH
Q 012608 262 LQYEPRERPNPKSLVT 277 (460)
Q Consensus 262 l~~~p~~Rps~~~il~ 277 (460)
|+.||.+|||+.++++
T Consensus 254 L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 254 LDMDVEKRGSAKELLQ 269 (293)
T ss_dssp TCSSTTTSCCHHHHTT
T ss_pred ccCChhHCcCHHHHhc
Confidence 9999999999999987
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-56 Score=406.97 Aligned_cols=243 Identities=21% Similarity=0.293 Sum_probs=212.0
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
++|++++.||+|+||+||+|+. .+|+.||+|++... .....+.+.+|+.++++++||||+++++++..++..|+||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 4689999999999999999995 46999999998642 2334678999999999999999999999999999999999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--C
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--K 179 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--~ 179 (460)
|||+||+|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 86 Ey~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 162 (263)
T d2j4za1 86 EYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR-VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162 (263)
T ss_dssp ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred eecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-eeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence 99999999999874 457999999999999999999999999 999999999999999999999999999876543 3
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...||+.|||||++.+..++.++|||||||++|+|+||+.||.+............. ...++..+++++.+|+.
T Consensus 163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 236 (263)
T d2j4za1 163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------EFTFPDFVTEGARDLIS 236 (263)
T ss_dssp ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHHH
T ss_pred ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHHHHH
Confidence 457899999999999988999999999999999999999999876544333322111 12345667899999999
Q ss_pred HHcccCCCCCCChhHHHH
Q 012608 260 RCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rps~~~il~ 277 (460)
+||+.||.+|||++++++
T Consensus 237 ~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp HHTCSSGGGSCCHHHHHT
T ss_pred HHccCCHhHCcCHHHHHc
Confidence 999999999999999987
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.1e-56 Score=417.16 Aligned_cols=268 Identities=21% Similarity=0.293 Sum_probs=214.6
Q ss_pred ccccCHHHHHHHhcCC------cccchhcccCCCCCCeEEEEEEc-CCc---EEEEEEecCCCCC-CHHHHHHHHHHHhc
Q 012608 10 FREFTLEQLKNATSGF------AVENIVSEHGEKAPNVVYKGKLE-NQR---RIAVKRFNRMAWP-DPRQFLEEARSVGQ 78 (460)
Q Consensus 10 ~~~~~~~~~~~~~~~f------~~~~i~~~lg~G~~g~Vy~~~~~-~~~---~vavK~~~~~~~~-~~~~~~~E~~~l~~ 78 (460)
+.-+|++|+.+++.+| ++|++.+.||+|+||+||+|.+. +|+ .||||.+...... ..+.|.+|+++|++
T Consensus 4 ~d~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~ 83 (299)
T d1jpaa_ 4 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 83 (299)
T ss_dssp CCGGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHh
Confidence 3457888888888766 45678899999999999999954 333 5889988654432 25679999999999
Q ss_pred CCCCccceeeeEEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEE
Q 012608 79 LRNNRLTNLLGCCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILF 158 (460)
Q Consensus 79 l~h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill 158 (460)
++|||||++++++..++..++|||||+||+|.+++.. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||+
T Consensus 84 l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~-iiHrDlKp~NILl 161 (299)
T d1jpaa_ 84 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMN-YVHRDLAARNILV 161 (299)
T ss_dssp CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEE
T ss_pred CCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhCC-CccCccccceEEE
Confidence 9999999999999999999999999999999998864 3457999999999999999999999999 9999999999999
Q ss_pred cCCCCeEEccCCCcccCCCCC---------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhh
Q 012608 159 DEDGNPRLSTFGLMKNSRDGK---------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDL 228 (460)
Q Consensus 159 ~~~~~~kl~DFg~a~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~ 228 (460)
+.++.+||+|||+++...... ...+|+.|||||.+.++.++.++|||||||++|||+| |..||.......
T Consensus 162 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~ 241 (299)
T d1jpaa_ 162 NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 241 (299)
T ss_dssp CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred CCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999998654321 2346889999999998999999999999999999998 788887654443
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 229 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+....... .....+..+++++.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus 242 ~~~~i~~~-----~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~ 292 (299)
T d1jpaa_ 242 VINAIEQD-----YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292 (299)
T ss_dssp HHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcC-----CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 33222111 1122455678899999999999999999999999999988754
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-56 Score=408.95 Aligned_cols=255 Identities=20% Similarity=0.274 Sum_probs=207.2
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
+++|+++++||+|+||+||+|++. ..||||+++..... ..+.|.+|+.++++++|||||++++++. ++..++|||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEe
Confidence 567889999999999999999864 35999999755432 3578999999999999999999999875 456899999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
||+||+|.+++.. ....+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+++.....
T Consensus 84 y~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 84 WCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKS-IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred cCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-EeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999999864 3457999999999999999999999999 999999999999999999999999999765432
Q ss_pred --CCccCCCcccCccccccC---CCCCCCceehHHHHHHHHhhCCCCCCChhhhh-hhhccccccccccccCCCCchhHH
Q 012608 179 --KSYSTNLAFTPPEYLRTG---RVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~---~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....||+.|||||++.+. .++.++|||||||++|||+||+.||.+..... ...........+ .....+..+++
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~ 240 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP-DLSKVRSNCPK 240 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCC-CGGGSCTTCCH
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC-cchhccccchH
Confidence 345789999999998643 47889999999999999999999987543221 111111111111 11234556788
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
++.+|+.+||+.||.+|||++++++.|+.+.+.
T Consensus 241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 241 AMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999988653
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9.1e-56 Score=410.40 Aligned_cols=254 Identities=20% Similarity=0.318 Sum_probs=217.0
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.++|++.++||+|+||+||+|.+. +|+.||||+++... ...++|.+|+++|++++|||||++++++..++..++||||
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 94 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence 467889999999999999999964 58999999987654 3567899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCC----
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGK---- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~---- 179 (460)
|++|+|.+++.......+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~-iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~ 173 (287)
T d1opja_ 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173 (287)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC-cccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence 99999999997666678999999999999999999999999 9999999999999999999999999998765432
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCCh-hhhhhhhccccccccccccCCCCchhHHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRL 257 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 257 (460)
...||+.|+|||++.+..++.++|||||||++|||++|..||... ......... ........+..+++++.+|
T Consensus 174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i-----~~~~~~~~~~~~~~~l~~l 248 (287)
T d1opja_ 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-----EKDYRMERPEGCPEKVYEL 248 (287)
T ss_dssp TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-----HTTCCCCCCTTCCHHHHHH
T ss_pred ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH-----hcCCCCCCCccchHHHHHH
Confidence 234688999999999999999999999999999999977665433 222221111 1112234556788999999
Q ss_pred HHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 258 ASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 258 i~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+.+||+.||++|||+.++++.|+.+..+
T Consensus 249 i~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 249 MRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887654
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-56 Score=406.58 Aligned_cols=246 Identities=19% Similarity=0.172 Sum_probs=204.1
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
++|+++++||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.++++++||||+++++++..++..|+||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 4689999999999999999995 56999999999755432 356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC------
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD------ 177 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~------ 177 (460)
|+||+|.+++. ..+.+++..++.++.||+.||+|||++| |+||||||+|||+++++.+||+|||+++....
T Consensus 85 ~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~-IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~ 161 (271)
T d1nvra_ 85 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG-ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161 (271)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence 99999999986 4567999999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 178 GKSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 178 ~~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
.....||+.|||||++.+..+ +.++|||||||++|+|+||+.||............. ............+++++.+
T Consensus 162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~ 238 (271)
T d1nvra_ 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW---KEKKTYLNPWKKIDSAPLA 238 (271)
T ss_dssp BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH---HTTCTTSTTGGGSCHHHHH
T ss_pred ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH---hcCCCCCCccccCCHHHHH
Confidence 235679999999999988776 578999999999999999999986543221111110 0111111223456789999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
|+.+||+.||++|||++++++
T Consensus 239 li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 239 LLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHcCCChhHCcCHHHHhc
Confidence 999999999999999999987
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-55 Score=401.47 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=205.6
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
-++|+++++||+|+||+||+|.+.+++.||||+++... ...++|.+|++++++++||||++++|++..++..++||||+
T Consensus 4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~ 82 (263)
T d1sm2a_ 4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82 (263)
T ss_dssp CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence 35789999999999999999998888999999997643 34678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~ 179 (460)
++|+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++..... .
T Consensus 83 ~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~ 160 (263)
T d1sm2a_ 83 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC-VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160 (263)
T ss_dssp TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred CCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhccc-eeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence 99999998864 3457899999999999999999999999 999999999999999999999999999865432 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCC-CCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...||+.|+|||++.+..++.++|||||||++|||+|+..| +.......+...... ......+..+++++.+|+
T Consensus 161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li 235 (263)
T d1sm2a_ 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-----GFRLYKPRLASTHVYQIM 235 (263)
T ss_dssp ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH-----TCCCCCCTTSCHHHHHHH
T ss_pred ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHh-----cCCCCCccccCHHHHHHH
Confidence 34678999999999999999999999999999999996544 443332222221111 112234556778999999
Q ss_pred HHHcccCCCCCCChhHHHHHhcccc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
.+||+.||++|||++++++.|+.+.
T Consensus 236 ~~cl~~~p~~Rps~~~il~~L~~i~ 260 (263)
T d1sm2a_ 236 NHCWKERPEDRPAFSRLLRQLAEIA 260 (263)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHccCCHhHCcCHHHHHHHHHHHH
Confidence 9999999999999999999998764
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-55 Score=408.29 Aligned_cols=246 Identities=16% Similarity=0.196 Sum_probs=209.7
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMP 105 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 105 (460)
.|+++++||+|+||+||+|.. .+|+.||||+++.......+.+.+|++++++++|||||++++++..++..++|||||+
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~ 92 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 92 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence 489999999999999999995 5699999999987666667889999999999999999999999999999999999999
Q ss_pred CCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC----CCCc
Q 012608 106 NETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD----GKSY 181 (460)
Q Consensus 106 g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~----~~~~ 181 (460)
||+|.+++.. ..+++++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.... ....
T Consensus 93 ~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~-ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 93 GGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNK-IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-EEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 9999998764 2457999999999999999999999999 99999999999999999999999999875442 2456
Q ss_pred cCCCcccCccccc-----cCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 182 STNLAFTPPEYLR-----TGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 182 ~~t~~y~aPE~~~-----~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
.||+.|||||++. +..++.++|||||||++|+|+||+.||.+.............. .+....+..+++++.+
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~s~~~~~ 247 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE---PPTLAQPSRWSSNFKD 247 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSC---CCCCSSGGGSCHHHHH
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---CCCCCccccCCHHHHH
Confidence 7999999999984 4558899999999999999999999987654332222111111 1112234567899999
Q ss_pred HHHHHcccCCCCCCChhHHHH
Q 012608 257 LASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~~il~ 277 (460)
||.+||+.||.+|||+.++++
T Consensus 248 li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 248 FLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp HHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHccCChhHCcCHHHHhc
Confidence 999999999999999999977
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-55 Score=406.05 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=212.3
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
+++|+++++||+|+||+||+|.+.+++.||||+++... ...+.|.+|+.++++++|||||++++++. ++..++||||+
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeC
Confidence 46789999999999999999998888999999997643 34678999999999999999999999875 45679999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~ 179 (460)
++|+|.+++......++++..++.|+.||+.||.|||+++ |+||||||+|||+++++.+||+|||+++..... .
T Consensus 90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~-ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~ 168 (272)
T d1qpca_ 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (272)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-cccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence 9999999886544557999999999999999999999999 999999999999999999999999999876533 3
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCC-hhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPS-HALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...||+.|||||++.++.++.++|||||||++|||+||..|+.. ............ ......+..+++++.+|+
T Consensus 169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li 243 (272)
T d1qpca_ 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-----GYRMVRPDNCPEELYQLM 243 (272)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHH
T ss_pred ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----cCCCCCcccChHHHHHHH
Confidence 45678999999999988899999999999999999997655543 222222111111 112234556788999999
Q ss_pred HHHcccCCCCCCChhHHHHHhccccc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.+||+.||++|||++++++.|+.+..
T Consensus 244 ~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 244 RLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 99999999999999999999987653
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-55 Score=403.57 Aligned_cols=248 Identities=17% Similarity=0.230 Sum_probs=200.2
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEee--CCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCE--GDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~l 99 (460)
.++|++++.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|++++++++||||+++++++.. ++.+|+
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 36799999999999999999995 569999999997655432 4568999999999999999999999864 456899
Q ss_pred EEEcCCCCCHHhhhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC----CcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 100 VAEYMPNETLAKHLFHW--ETHPMKWAMRLRVVLHLAQALEYCTSKG----RALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~----~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
|||||+||+|.+++... .+..+++..++.++.||+.||.|||+++ +|+||||||+|||++.++.+||+|||+++
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 99999999999988642 3467999999999999999999999864 39999999999999999999999999998
Q ss_pred cCCCC----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCch
Q 012608 174 NSRDG----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDD 249 (460)
Q Consensus 174 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (460)
..... ....||+.|||||++.+..++.++|||||||++|||+||+.||.......+....... .....+..
T Consensus 163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~ 237 (269)
T d2java1 163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPYR 237 (269)
T ss_dssp HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-----CCCCCCTT
T ss_pred ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----CCCCCCcc
Confidence 65433 3567899999999999889999999999999999999999999776544333222111 11234556
Q ss_pred hHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 250 DGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++++.+|+.+||+.||.+|||+.++++
T Consensus 238 ~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 238 YSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 7889999999999999999999999986
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-54 Score=405.58 Aligned_cols=243 Identities=20% Similarity=0.223 Sum_probs=208.3
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
|+++++||+|+||+||+|+. .+|+.||||+++.....+ .+.+.+|+.++++++|||||++++++..++..|+||||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 96 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence 88999999999999999994 579999999997655433 35688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCCCCccC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDGKSYST 183 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~~~~~~ 183 (460)
|+||+|..++. ..+++++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||++..........|
T Consensus 97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN-MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCC-EeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 99999977665 3467999999999999999999999999 99999999999999999999999999998888888899
Q ss_pred CCcccCcccccc---CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 184 NLAFTPPEYLRT---GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 184 t~~y~aPE~~~~---~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
|+.|||||++.+ +.++.++|||||||++|||++|..||.+............. ......+..+++++.+||.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----CCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 45899999999999999999999998765433222111111 11112234567899999999
Q ss_pred HcccCCCCCCChhHHHH
Q 012608 261 CLQYEPRERPNPKSLVT 277 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~ 277 (460)
||+.||.+|||++++++
T Consensus 250 ~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp HTCSSGGGSCCHHHHTT
T ss_pred HCcCChhHCcCHHHHHh
Confidence 99999999999999987
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-54 Score=410.34 Aligned_cols=249 Identities=19% Similarity=0.223 Sum_probs=205.6
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
++|+++++||+|+||+||+|+. .+|+.||+|+++...... ...+.+|+.+|++++|||||++++++..++..++||||
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy 85 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 85 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4689999999999999999995 579999999997654333 56799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcccccccCCcEEEcCCCCeEEccCCCcccCC--CCCC
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-GRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR--DGKS 180 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~--~~~~ 180 (460)
++||+|.+++.. .+.+++..+..++.|++.||.|||++ + |+||||||+|||++.++.+||+|||+|+... ...+
T Consensus 86 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~-IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~ 162 (322)
T d1s9ja_ 86 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 162 (322)
T ss_dssp CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC-CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC--
T ss_pred CCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC-EEccccCHHHeeECCCCCEEEeeCCCccccCCCcccc
Confidence 999999999974 45799999999999999999999985 7 9999999999999999999999999998643 3356
Q ss_pred ccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc-------------------------
Q 012608 181 YSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ------------------------- 235 (460)
Q Consensus 181 ~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------------------------- 235 (460)
..||+.|||||++.+..++.++||||+||++|||++|+.||.+............
T Consensus 163 ~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (322)
T d1s9ja_ 163 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGM 242 (322)
T ss_dssp -CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------------
T ss_pred ccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccc
Confidence 7899999999999999999999999999999999999999965432111000000
Q ss_pred -------------ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 -------------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 -------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
......++.......+.++.+|+.+||+.||.+|||++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 243 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp ---CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 000000011111235688999999999999999999999987
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.5e-54 Score=404.06 Aligned_cols=246 Identities=17% Similarity=0.205 Sum_probs=196.2
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.|++++.||+|+||+||+|.. .+|+.||||++...... ....+.+|+.++++++||||+++++++..++..|+|||||
T Consensus 10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~ 89 (307)
T d1a06a_ 10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 89 (307)
T ss_dssp TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 389999999999999999995 46999999999755432 3456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc---CCCCeEEccCCCcccCCCC---
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~---~~~~~kl~DFg~a~~~~~~--- 178 (460)
+||+|.+++. ..+.+++..+..++.||+.||+|||+++ |+||||||+|||+. +++.+||+|||+++.....
T Consensus 90 ~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~ 166 (307)
T d1a06a_ 90 SGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLG-IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 166 (307)
T ss_dssp CSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred CCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhce-eeeEEecccceeecccCCCceEEEeccceeEEccCCCee
Confidence 9999999997 3567999999999999999999999999 99999999999994 5789999999999865433
Q ss_pred CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 179 KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
....||+.|||||++.+..++.++|||||||++|+|+||+.||.+.............. .......++.+++++.+|+
T Consensus 167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~~~~~li 244 (307)
T d1a06a_ 167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE--YEFDSPYWDDISDSAKDFI 244 (307)
T ss_dssp ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTC--CCCCTTTTTTSCHHHHHHH
T ss_pred eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccC--CCCCCccccCCCHHHHHHH
Confidence 35679999999999999899999999999999999999999998765444333222211 1122234456789999999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||+.||++|||+.++++
T Consensus 245 ~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 245 RHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp HHHSCSSGGGSCCHHHHHH
T ss_pred HHHccCCHhHCcCHHHHhc
Confidence 9999999999999999998
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-54 Score=390.83 Aligned_cols=249 Identities=25% Similarity=0.343 Sum_probs=214.6
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
-++++++++||+|+||+||+|++.+++.||||+++.... ..+.|.+|+.++++++||||+++++++..++.+++||||+
T Consensus 3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~ 81 (258)
T d1k2pa_ 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 81 (258)
T ss_dssp CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence 357789999999999999999998889999999986543 4678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~ 179 (460)
++|+|.+++.. ....+++..+++++.|++.||.|||+++ |+||||||+|||+++++.+||+|||+++..... .
T Consensus 82 ~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~-iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 159 (258)
T d1k2pa_ 82 ANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQ-FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159 (258)
T ss_dssp TTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT-BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred CCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhcC-cccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence 99999998764 3457889999999999999999999999 999999999999999999999999999754432 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.......+....... .....|..+++++.+|+
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~~li 234 (258)
T d1k2pa_ 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIM 234 (258)
T ss_dssp CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhC-----CCCCCcccccHHHHHHH
Confidence 3567899999999999999999999999999999998 78888765544443322221 12234556778999999
Q ss_pred HHHcccCCCCCCChhHHHHHhcc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~ 281 (460)
.+||+.||++|||++++++.|..
T Consensus 235 ~~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 235 YSCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHHC
T ss_pred HHHccCCHhHCcCHHHHHHHhhC
Confidence 99999999999999999998854
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-54 Score=402.64 Aligned_cols=244 Identities=18% Similarity=0.191 Sum_probs=210.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.++|++++.||+|+||+||+|.. .+|+.||||+++.. .....+.+.+|++++++++||||+++++++..++..|+|
T Consensus 7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence 36799999999999999999995 56999999998642 233467899999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
||||+||+|.+++.. .+.+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 87 mEy~~gg~L~~~~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~-iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~ 163 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 163 (288)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EEccCCCCHHHhhhc--cCCCCHHHHHHHHHHHHHHHHhhcccc-EEcCcCCccccccCCCceEEecccccceecccCCc
Confidence 999999999998863 467999999999999999999999999 999999999999999999999999999865422
Q ss_pred ----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHH
Q 012608 179 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTEL 254 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (460)
....||+.|||||++.+..++.++|||||||++|+|+||..||.+............. ...++..+++++
T Consensus 164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 237 (288)
T d1uu3a_ 164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKA 237 (288)
T ss_dssp ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT------CCCCCTTCCHHH
T ss_pred ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC------CCCCCccCCHHH
Confidence 3457999999999999999999999999999999999999999876544433322221 113456678999
Q ss_pred HHHHHHHcccCCCCCCChhHHHH
Q 012608 255 VRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 255 ~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.+||.+||+.||.+|||++|+++
T Consensus 238 ~~li~~~L~~dP~~R~t~~e~~~ 260 (288)
T d1uu3a_ 238 RDLVEKLLVLDATKRLGCEEMEG 260 (288)
T ss_dssp HHHHHTTSCSSGGGSTTSGGGTC
T ss_pred HHHHHHHccCCHhHCcCHHHHcC
Confidence 99999999999999999999753
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=4.7e-54 Score=409.35 Aligned_cols=249 Identities=19% Similarity=0.179 Sum_probs=214.1
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
|+.|++++.||+|+||+||+|.. .+|+.||||+++.....+.+.+.+|+.+|++++||||+++++++..++.+|+||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 56799999999999999999995 57999999999766544566789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc--CCCCeEEccCCCcccCCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK-- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~--~~~~~kl~DFg~a~~~~~~~-- 179 (460)
|+||+|.+.+.. ...++++..++.|+.||+.||.|||++| |+||||||+|||++ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS-IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC-eeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999987754 3457999999999999999999999999 99999999999997 67899999999998766543
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...||+.|||||++.+..++.++|||||||++|+|+||..||.+............. ...+.......+++++.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC--DWEFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHC--CCCCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCcccccCCCHHHHHHH
Confidence 457899999999999999999999999999999999999999875444332222111 11122334557789999999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||+.||.+|||+.++++
T Consensus 264 ~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHT
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999987
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1e-53 Score=406.67 Aligned_cols=249 Identities=18% Similarity=0.158 Sum_probs=212.4
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
..+|++++.||+|+||+||+|+. .+|+.||||++......+.+.+.+|+.+|++++|||||++++++..++.+|+||||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 104 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 104 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 34789999999999999999995 56999999999776555567899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc--CCCCeEEccCCCcccCCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD--EDGNPRLSTFGLMKNSRDGK-- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~--~~~~~kl~DFg~a~~~~~~~-- 179 (460)
|+||+|.+++.. ..+.+++..+..|+.||+.||.|||++| ||||||||+|||++ .++.+||+|||+++......
T Consensus 105 ~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~-iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 182 (350)
T d1koaa2 105 MSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN-YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 182 (350)
T ss_dssp CCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE
T ss_pred CCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeeeeechhHeeeccCCCCeEEEeecchheeccccccc
Confidence 999999998854 3457999999999999999999999999 99999999999996 46889999999998765443
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...||+.|||||++.+..++.++|||||||++|+|+||+.||.+............... .........+++++.+||
T Consensus 183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 260 (350)
T d1koaa2 183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFI 260 (350)
T ss_dssp EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCCGGGGGCCHHHHHHH
T ss_pred ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHH
Confidence 46789999999999998999999999999999999999999976644433322211111 111222345678999999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||+.||++|||++++++
T Consensus 261 ~~~L~~dP~~R~t~~eil~ 279 (350)
T d1koaa2 261 RKLLLADPNTRMTIHQALE 279 (350)
T ss_dssp HHHCCSSGGGSCCHHHHHH
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999998
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-54 Score=395.72 Aligned_cols=254 Identities=23% Similarity=0.321 Sum_probs=210.9
Q ss_pred CcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
++++++.+.||+|+||.||+|++.+++.||||+++... ...+.|.+|+.++++++|||||++++++. ++..++||||+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~ 93 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 93 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence 46799999999999999999998888899999997544 35678999999999999999999999985 46689999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-----C
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-----K 179 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-----~ 179 (460)
++|+|..++.....+.+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 172 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh-eecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence 9999999887655567999999999999999999999999 999999999999999999999999999765432 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCCh-hhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...||+.|+|||.+.++.++.++|||||||++|||+||..|+... ............ .....+..+++++.++|
T Consensus 173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 247 (285)
T d1fmka3 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLM 247 (285)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhc-----CCCCCCcccCHHHHHHH
Confidence 356789999999999999999999999999999999977665443 222222111111 11234567788999999
Q ss_pred HHHcccCCCCCCChhHHHHHhccccccC
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.+||+.||++|||+++|++.|+.+....
T Consensus 248 ~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 248 CQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 9999999999999999999999887543
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-53 Score=391.52 Aligned_cols=243 Identities=19% Similarity=0.249 Sum_probs=200.0
Q ss_pred cchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEee----CCeeEEE
Q 012608 28 ENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCE----GDERLLV 100 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~lv 100 (460)
+++..+||+|+||+||+|.. .+++.||+|++...... ..+.+.+|+++|++++|||||++++++.. ++.+++|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 46777899999999999995 46899999998754332 24678999999999999999999999865 3457999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CcccccccCCcEEEc-CCCCeEEccCCCcccCCCC
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKG-RALYHDLNAYRILFD-EDGNPRLSTFGLMKNSRDG 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~iiH~Dikp~Nill~-~~~~~kl~DFg~a~~~~~~ 178 (460)
|||++||+|.+++.. ...+++..+..++.||+.||+|||+++ +|+||||||+|||++ +++.+||+|||+++.....
T Consensus 91 mE~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~ 168 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 168 (270)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EeCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC
Confidence 999999999999874 457999999999999999999999976 499999999999996 5789999999999865443
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhh-hhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....||+.|||||++.+ .++.++|||||||++|+|+||+.||..... ..+........ .+..++...++++.
T Consensus 169 ~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~----~~~~~~~~~~~~~~ 243 (270)
T d1t4ha_ 169 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGV----KPASFDKVAIPEVK 243 (270)
T ss_dssp SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTC----CCGGGGGCCCHHHH
T ss_pred ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCC----CCcccCccCCHHHH
Confidence 35679999999999874 699999999999999999999999865322 21221111111 11223445668899
Q ss_pred HHHHHHcccCCCCCCChhHHHH
Q 012608 256 RLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~ 277 (460)
+||.+||+.||++|||+.|+++
T Consensus 244 ~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 244 EIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHccCCHhHCcCHHHHhC
Confidence 9999999999999999999987
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-53 Score=393.61 Aligned_cols=249 Identities=21% Similarity=0.257 Sum_probs=206.6
Q ss_pred ccchhc-ccCCCCCCeEEEEEEc---CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEE
Q 012608 27 VENIVS-EHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 27 ~~~i~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 101 (460)
.+.+.. +||+|+||+||+|.+. ++..||||+++..... ..+.|.+|+++|++++|||||++++++.. +..++||
T Consensus 9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvm 87 (285)
T d1u59a_ 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 87 (285)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEE
T ss_pred CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEE
Confidence 344555 4999999999999753 3557999999765432 25679999999999999999999999864 5689999
Q ss_pred EcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC---
Q 012608 102 EYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 102 e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~--- 178 (460)
||++||+|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 88 E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~-iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 165 (285)
T d1u59a_ 88 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 165 (285)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EeCCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC-eecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence 99999999998754 3467999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 179 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
....||+.|||||++.++.++.++|||||||++|||+| |..||.......+...... ......++.+|++
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~ 240 (285)
T d1u59a_ 166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPE 240 (285)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-----TCCCCCCTTCCHH
T ss_pred cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHH
Confidence 23457899999999998899999999999999999998 8988876543322222111 1122456678899
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
+.+||.+||+.||++|||+.+|++.|+...
T Consensus 241 l~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 241 LYALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 999999999999999999999999887654
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-53 Score=393.14 Aligned_cols=243 Identities=21% Similarity=0.266 Sum_probs=200.8
Q ss_pred cccCCCCCCeEEEEEEc---CCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEcCCC
Q 012608 32 SEHGEKAPNVVYKGKLE---NQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEYMPN 106 (460)
Q Consensus 32 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g 106 (460)
++||+|+||+||+|.+. +++.||||+++....+. .+.|.+|+.++++++|||||++++++.. +..++||||++|
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 46999999999999853 35789999997654333 4679999999999999999999999864 567899999999
Q ss_pred CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-------C
Q 012608 107 ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-------K 179 (460)
Q Consensus 107 ~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-------~ 179 (460)
|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 92 g~L~~~l~~--~~~l~~~~~~~i~~qi~~gl~ylH~~~-iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHhh--ccCCCHHHHHHHHHHHHHHHhhHHhCC-cccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 999999873 567999999999999999999999999 999999999999999999999999999865432 2
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...||+.|||||.+.+..++.++|||||||++|||+| |+.||.+.....+...... ......+..+|+++.+|+
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~~~~li 243 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-----GERMGCPAGCPREMYDLM 243 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHH
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCcccCHHHHHHH
Confidence 3467899999999998899999999999999999998 8888876543332222111 112234567789999999
Q ss_pred HHHcccCCCCCCChhHHHHHhcccc
Q 012608 259 SRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
.+||+.||.+|||+++|++.|+...
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~~ 268 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNYY 268 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCHH
Confidence 9999999999999999999887654
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-53 Score=399.14 Aligned_cols=245 Identities=20% Similarity=0.243 Sum_probs=213.4
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
+.++|++++.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+.+|++++||||+++++++..++.+|+
T Consensus 3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~i 82 (337)
T d1o6la_ 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccc
Confidence 356799999999999999999995 57999999999643 23346789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
|||||+||+|.+++.. .+.+++..++.++.||+.||+|||+++ |+||||||+|||++++|.+||+|||+++.....
T Consensus 83 v~ey~~gg~L~~~~~~--~~~~~e~~~~~~~~qil~al~ylH~~~-iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~ 159 (337)
T d1o6la_ 83 VMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD-VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred ceeccCCCchhhhhhc--ccCCcHHHHHHHHHHHhhhhhhhhhcC-ccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence 9999999999999874 467999999999999999999999999 999999999999999999999999999865432
Q ss_pred ---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHH
Q 012608 179 ---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 ---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.....+....... ...+|..+++++.
T Consensus 160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 233 (337)
T d1o6la_ 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAK 233 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHH
Confidence 3567899999999999999999999999999999999999999877655443332221 1235667889999
Q ss_pred HHHHHHcccCCCCCCC-----hhHHHH
Q 012608 256 RLASRCLQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps-----~~~il~ 277 (460)
+||.+||+.||.+|++ ++++++
T Consensus 234 dli~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 234 SLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHhhccCCchhhcccccccHHHHHc
Confidence 9999999999999995 777776
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-53 Score=395.20 Aligned_cols=246 Identities=15% Similarity=0.153 Sum_probs=208.7
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC------CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.|+++++||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|+.+|++++|||||++++++..++..|+
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 489999999999999999995 57999999998654321 25789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC----CeEEccCCCcccC
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG----NPRLSTFGLMKNS 175 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~----~~kl~DFg~a~~~ 175 (460)
|||||+||+|.+++.. .+.+++..++.++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||++...
T Consensus 91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~~-ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhcc-eeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 9999999999999874 457999999999999999999999999 99999999999998776 5999999999876
Q ss_pred CCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 176 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 176 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
... ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||.+............... ......++.+++
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~ 245 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSA 245 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCC--CCCHHHHTTSCH
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--CCCchhcCCCCH
Confidence 543 355789999999999988899999999999999999999999987654433322211111 111122345678
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHH
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++.+||.+||+.||.+|||++++++
T Consensus 246 ~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 246 LAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHhc
Confidence 9999999999999999999999998
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-53 Score=392.83 Aligned_cols=253 Identities=21% Similarity=0.280 Sum_probs=204.6
Q ss_pred cccchhcccCCCCCCeEEEEEEcC-C----cEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLEN-Q----RRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
+++++.+.||+|+||+||+|.+.+ + ..||||+++...... ...|.+|+.++++++|||||+++|++...+..++
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence 457778889999999999998543 2 479999997654332 4578999999999999999999999999999999
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||+.++++.+.+.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 87 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~-iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 164 (283)
T d1mqba_ 87 ITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN-YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 164 (283)
T ss_dssp EEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EEEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhccccc-cccCccccceEEECCCCeEEEcccchhhcccCCC
Confidence 9999999999987764 4467999999999999999999999999 999999999999999999999999999865432
Q ss_pred ------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCCh-hhhhhhhccccccccccccCCCCchhH
Q 012608 179 ------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 179 ------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
....||+.|||||++.++.++.++|||||||++|||+||..|+... ....+...... ......+..++
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~-----~~~~~~~~~~~ 239 (283)
T d1mqba_ 165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-----GFRLPTPMDCP 239 (283)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-----TCCCCCCTTCB
T ss_pred ccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhc-----cCCCCCchhhH
Confidence 2245789999999999999999999999999999999976665433 22222111111 11223455678
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
..+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 240 ~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 240 SAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 8999999999999999999999999999887653
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.1e-52 Score=394.57 Aligned_cols=244 Identities=18% Similarity=0.231 Sum_probs=212.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
.++|++++.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+.++++++||||+++++++..++..|+|
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence 35799999999999999999995 56999999998642 233467899999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-C
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-K 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~ 179 (460)
||||+||+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.+|.+||+|||+++..... .
T Consensus 83 mE~~~gg~l~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 159 (316)
T d1fota_ 83 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD-IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 159 (316)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred eeecCCccccccccc--cccccccHHHHHHHHHHHhhhhhccCc-EEccccCchheeEcCCCCEEEecCccceEeccccc
Confidence 999999999998873 567889999999999999999999999 999999999999999999999999999876544 4
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...||+.|||||++.+..++.++|||||||++|+|+||+.||.+............. ...+++.+++++.+++.
T Consensus 160 ~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 233 (316)
T d1fota_ 160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLS 233 (316)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 678999999999999889999999999999999999999999876554433332221 12345667889999999
Q ss_pred HHcccCCCCCC-----ChhHHHH
Q 012608 260 RCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rp-----s~~~il~ 277 (460)
+||+.||.+|+ |++++++
T Consensus 234 ~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 234 RLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHhhhCHHhccccchhhHHHHHc
Confidence 99999999996 8899987
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-53 Score=400.88 Aligned_cols=251 Identities=21% Similarity=0.267 Sum_probs=205.9
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-CC-----cEEEEEEecCCCC-CCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCe
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-NQ-----RRIAVKRFNRMAW-PDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~ 96 (460)
.+++++++.||+|+||+||+|+.. .+ ..||+|.+..... .....+.+|+.++.++ +|||||++++++...+.
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~ 115 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 115 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence 367899999999999999999853 23 3699999865432 3356799999999998 89999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCc
Q 012608 97 RLLVAEYMPNETLAKHLFHWE---------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYR 155 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~---------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~N 155 (460)
.++|||||+||+|.+++.... ...+++..++.++.||+.||+|||+++ ||||||||+|
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~-IiHRDlKp~N 194 (325)
T d1rjba_ 116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS-CVHRDLAARN 194 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT-EEETTCSGGG
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCchhc
Confidence 999999999999999997532 135889999999999999999999999 9999999999
Q ss_pred EEEcCCCCeEEccCCCcccCCCCC------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhh
Q 012608 156 ILFDEDGNPRLSTFGLMKNSRDGK------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDL 228 (460)
Q Consensus 156 ill~~~~~~kl~DFg~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~ 228 (460)
||++.++.+||+|||+++...... ...||+.|||||++.++.++.++|||||||++|||+| |..||.+.....
T Consensus 195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~ 274 (325)
T d1rjba_ 195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274 (325)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999998654332 3456899999999999999999999999999999998 888886543221
Q ss_pred hhhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhc
Q 012608 229 IRDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALS 280 (460)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~ 280 (460)
..... .........+..+++++.+||.+||+.||++|||+++|++.|.
T Consensus 275 ~~~~~----~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 275 NFYKL----IQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HHHHH----HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHH----HhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 11111 1111222345677899999999999999999999999999884
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-53 Score=386.98 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=204.9
Q ss_pred CCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEee-CCeeEEEEE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAE 102 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 102 (460)
+.+++++++.||+|+||.||+|.+ .|+.||||+++... ..+.+.+|+.++++++||||++++|++.+ .+.+++|||
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e 81 (262)
T d1byga_ 5 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 81 (262)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred CHHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence 456788999999999999999998 57899999997543 46789999999999999999999999855 456899999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-CCc
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-KSY 181 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~~~ 181 (460)
|+++|+|.+++.......+++..+++|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~-ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~ 160 (262)
T d1byga_ 82 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 160 (262)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc-eeccccchHhheecCCCCEeecccccceecCCCCccc
Confidence 999999999997544456899999999999999999999999 999999999999999999999999999875443 345
Q ss_pred cCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHHH
Q 012608 182 STNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLASR 260 (460)
Q Consensus 182 ~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 260 (460)
.+|..|+|||.+.+..++.++|||||||++|||+| |+.|+.......+...... .....++..+++++.+++.+
T Consensus 161 ~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~~~~li~~ 235 (262)
T d1byga_ 161 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPAVYEVMKN 235 (262)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-----TCCCCCCTTCCHHHHHHHHH
T ss_pred cccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCCHHHHHHHHH
Confidence 67899999999998999999999999999999998 5666654433322222211 12234566778999999999
Q ss_pred HcccCCCCCCChhHHHHHhccccc
Q 012608 261 CLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 261 ~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
||+.||.+|||+.++++.|+.+..
T Consensus 236 cl~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 236 CWHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcccCHhHCcCHHHHHHHHHHHHh
Confidence 999999999999999999987753
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.4e-52 Score=386.59 Aligned_cols=253 Identities=18% Similarity=0.229 Sum_probs=207.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCC----ee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGD----ER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~ 97 (460)
++|++++.||+|+||+||+|.. .+|+.||||+++.....+ .+.+.+|++++++++||||+++++++...+ ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 4589999999999999999994 579999999998765544 346899999999999999999999987654 37
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
|+||||++|++|.+++.. .+.+++..++.++.||+.||.|||++| |+||||||+|||++.++..+++|||.+.....
T Consensus 87 ~lvmE~~~g~~L~~~~~~--~~~l~~~~~~~i~~qi~~al~~lH~~~-iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~ 163 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG-IIHRDVKPANIMISATNAVKVMDFGIARAIAD 163 (277)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred EEEEECCCCCEehhhhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-ccCccccCcccccCccccceeehhhhhhhhcc
Confidence 899999999999998864 457999999999999999999999999 99999999999999999999999998765432
Q ss_pred -------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchh
Q 012608 178 -------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDD 250 (460)
Q Consensus 178 -------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (460)
.....||+.|||||++.+..++.++|||||||++|+|+||+.||............... .+.+.....+.+
T Consensus 164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 241 (277)
T d1o6ya_ 164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE--DPIPPSARHEGL 241 (277)
T ss_dssp ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCGGGTSSSC
T ss_pred ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhc--CCCCCchhccCC
Confidence 23456899999999999888999999999999999999999999776543332222111 111222344567
Q ss_pred HHHHHHHHHHHcccCCCCCC-ChhHHHHHhcccc
Q 012608 251 GTELVRLASRCLQYEPRERP-NPKSLVTALSPLQ 283 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rp-s~~~il~~L~~~~ 283 (460)
|+++.++|.+||+.||.+|| |++++++.|..+.
T Consensus 242 s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 242 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 89999999999999999998 8999999887653
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.1e-52 Score=394.73 Aligned_cols=244 Identities=16% Similarity=0.177 Sum_probs=212.6
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
+++|++++.||+|+||+||+|.. .+|+.||||+++.. .....+.+.+|+.+|++++||||+++++++...+..++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 56799999999999999999995 57999999998642 233467899999999999999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-C
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-K 179 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-~ 179 (460)
|||+.||+|.+++.. .+.+++..++.++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++..... .
T Consensus 120 ~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~~-iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~ 196 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred cccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-EecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence 999999999999874 457999999999999999999999999 999999999999999999999999999876543 4
Q ss_pred CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHHH
Q 012608 180 SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLAS 259 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 259 (460)
...||+.|||||++.+..++.++|||||||++|+|+||..||.+.............. ...+..+++++.++|.
T Consensus 197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~li~ 270 (350)
T d1rdqe_ 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK------VRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTCCHHHHHHHH
T ss_pred cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCC------CCCCccCCHHHHHHHH
Confidence 5679999999999999999999999999999999999999998765443333222211 1345567889999999
Q ss_pred HHcccCCCCCC-----ChhHHHH
Q 012608 260 RCLQYEPRERP-----NPKSLVT 277 (460)
Q Consensus 260 ~~l~~~p~~Rp-----s~~~il~ 277 (460)
+||+.||.+|+ |++++++
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHhhhCHHhccccccccHHHHHc
Confidence 99999999994 8999987
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5.7e-52 Score=382.20 Aligned_cols=248 Identities=17% Similarity=0.160 Sum_probs=210.2
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC---------HHHHHHHHHHHhcCC-CCccceeeeEEee
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD---------PRQFLEEARSVGQLR-NNRLTNLLGCCCE 93 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-h~~iv~~~~~~~~ 93 (460)
|.+|++++.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.++++++ ||||+++++++..
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 57899999999999999999995 579999999997654332 235889999999996 9999999999999
Q ss_pred CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 94 GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 94 ~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
++..|+|||||+||+|.+++.. .+.+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN-IVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-CcccccccceEEEcCCCCeEEccchhee
Confidence 9999999999999999999974 457999999999999999999999999 9999999999999999999999999998
Q ss_pred cCCCC---CCccCCCcccCcccccc------CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccC
Q 012608 174 NSRDG---KSYSTNLAFTPPEYLRT------GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEG 244 (460)
Q Consensus 174 ~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 244 (460)
..... ....||+.|+|||.+.+ ..++.++||||+||++|+|+||+.||.+............... ....
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~--~~~~ 236 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QFGS 236 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC--CCCC
Confidence 76543 45678999999999863 3368899999999999999999999987654433322221111 1222
Q ss_pred CCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 245 QFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.....+++++.+++.+||+.||++|||+.++++
T Consensus 237 ~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 237 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 234568899999999999999999999999976
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-52 Score=382.52 Aligned_cols=252 Identities=20% Similarity=0.259 Sum_probs=201.7
Q ss_pred CcccchhcccCCCCCCeEEEEEEcC----CcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLEN----QRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
.++|++++.||+|+||+||+|++.. +..||||.++...... .+.+.+|+.++++++||||+++++++. ++..++
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i 84 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 84 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence 3679999999999999999998532 3568999886544332 467999999999999999999999985 567899
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 85 v~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~ 162 (273)
T d1mp8a_ 85 IMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKR-FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162 (273)
T ss_dssp EEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhcccC-eeccccchhheeecCCCcEEEccchhheeccCCc
Confidence 9999999999998754 4567999999999999999999999999 999999999999999999999999999865432
Q ss_pred ----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 179 ----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 179 ----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
....||+.|+|||.+.+..++.++|||||||++|||+| |.+||............... .....++.++++
T Consensus 163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~ 237 (273)
T d1mp8a_ 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPT 237 (273)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----CCCCCCTTCCHH
T ss_pred ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHH
Confidence 23457899999999998999999999999999999998 78777655443332222111 112346678899
Q ss_pred HHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 254 LVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
+.+||.+||+.||.+|||+.+|++.|+.+..
T Consensus 238 ~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 238 LYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999987643
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-51 Score=389.95 Aligned_cols=246 Identities=15% Similarity=0.142 Sum_probs=200.7
Q ss_pred cccchhcc-cCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceeeeEEee----CCeeE
Q 012608 26 AVENIVSE-HGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLLGCCCE----GDERL 98 (460)
Q Consensus 26 ~~~~i~~~-lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~ 98 (460)
.+|+++++ ||+|+||+||+|.. .+|+.||||+++. ...+.+|+.++.++ +||||+++++++.. ++.+|
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 56888865 99999999999995 6799999999853 35788999987665 89999999999865 35689
Q ss_pred EEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC---CCCeEEccCCCcccC
Q 012608 99 LVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE---DGNPRLSTFGLMKNS 175 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~---~~~~kl~DFg~a~~~ 175 (460)
+|||||+||+|.+++.......+++..++.|+.||+.||+|||++| |+||||||+|||++. .+.+||+|||+++..
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~-iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN-IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC-Cccccccccccccccccccccccccccceeeec
Confidence 9999999999999997655567999999999999999999999999 999999999999975 567999999999865
Q ss_pred CCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccccc--ccCCCCchh
Q 012608 176 RDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSC--LEGQFTDDD 250 (460)
Q Consensus 176 ~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 250 (460)
... ....||+.|||||++.+..++.++|||||||++|+|+||+.||.+.................. .+......+
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 244 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence 433 456789999999999988999999999999999999999999976533222111111111111 111112356
Q ss_pred HHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 251 GTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 251 ~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
++++.+||.+||+.||++|||+.++++
T Consensus 245 s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 245 SEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 789999999999999999999999987
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-52 Score=389.75 Aligned_cols=248 Identities=15% Similarity=0.191 Sum_probs=209.4
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
|++|+++++||+|+||+||+|.. .+|+.||||+++... .+...+.+|+++|++++||||+++++++..++.+|+||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 67899999999999999999995 569999999997643 2245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC--CCCeEEccCCCcccCCCCC--
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE--DGNPRLSTFGLMKNSRDGK-- 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~--~~~~kl~DFg~a~~~~~~~-- 179 (460)
|+|++|.+++.. .+..+++..++.++.||+.||+|||++| |+||||||+|||++. .+.+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~-iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~ 160 (321)
T d1tkia_ 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN-IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHcC-CCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence 999999999864 3347999999999999999999999999 999999999999984 4579999999998765432
Q ss_pred -CccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHHHH
Q 012608 180 -SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVRLA 258 (460)
Q Consensus 180 -~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 258 (460)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||................. .+.....+.+++++.+||
T Consensus 161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 238 (321)
T d1tkia_ 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY--TFDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC--CCCHHHHTTSCHHHHHHH
T ss_pred cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCChhhccCCCHHHHHHH
Confidence 45689999999999988899999999999999999999999987655433332221111 011111234678899999
Q ss_pred HHHcccCCCCCCChhHHHH
Q 012608 259 SRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 259 ~~~l~~~p~~Rps~~~il~ 277 (460)
.+||+.||.+|||+.++++
T Consensus 239 ~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 239 DRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHH
T ss_pred HHHccCChhHCcCHHHHhc
Confidence 9999999999999999987
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-52 Score=380.85 Aligned_cols=252 Identities=20% Similarity=0.267 Sum_probs=200.1
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc--CC--cEEEEEEecCCCCCC---HHHHHHHHHHHhcCCCCccceeeeEEeeCCe
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE--NQ--RRIAVKRFNRMAWPD---PRQFLEEARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
+..+|+++++||+|+||.||+|+.. ++ ..||||+++...... .+.|.+|+.++++++||||++++|++.. +.
T Consensus 6 ~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~ 84 (273)
T d1u46a_ 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PP 84 (273)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred chHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cc
Confidence 3467999999999999999999843 23 368999987654322 4679999999999999999999999965 56
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.++||||+++++|.+.+.. ..+.+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~-iiHrDikp~NIll~~~~~vkl~DfGl~~~~~ 162 (273)
T d1u46a_ 85 MKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKR-FIHRDLAARNLLLATRDLVKIGDFGLMRALP 162 (273)
T ss_dssp CEEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred hheeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhCC-EeeeeecHHHhccccccceeeccchhhhhcc
Confidence 7899999999999988765 3457999999999999999999999999 9999999999999999999999999998764
Q ss_pred CCC-------CccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCc
Q 012608 177 DGK-------SYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTD 248 (460)
Q Consensus 177 ~~~-------~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (460)
... ...+|..|+|||.+.+..++.++|||||||++|||+| |..||.+............. ......+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~----~~~~~~~~ 238 (273)
T d1u46a_ 163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPE 238 (273)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCT
T ss_pred cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhC----CCCCCCcc
Confidence 432 3356789999999999899999999999999999998 89888766544433222111 11223455
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHHHhccc
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPL 282 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~ 282 (460)
.+++++.+++.+||..||++|||+.+|++.|...
T Consensus 239 ~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 239 DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 6788999999999999999999999999988654
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-51 Score=388.02 Aligned_cols=252 Identities=17% Similarity=0.252 Sum_probs=205.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCc----EEEEEEecCCC-CCCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQR----RIAVKRFNRMA-WPDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 99 (460)
++|++++.||+|+||+||+|.+ .+|+ +||+|+++... ....+.|.+|+.++++++|||||++++++..+ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 5699999999999999999985 3454 68999987543 33467899999999999999999999999764 5678
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC-
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG- 178 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~- 178 (460)
++|++.+++|.+.+.. ....+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~-iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRR-LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHcC-cccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 8899999999988765 4567999999999999999999999999 999999999999999999999999998865432
Q ss_pred -----CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhccccccccccccCCCCchhHH
Q 012608 179 -----KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGT 252 (460)
Q Consensus 179 -----~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (460)
....||+.|||||.+.++.++.++|||||||++|||+| |..||.+.....+...... ......+..+++
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~-----~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-----GERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHH-----TCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCcccCH
Confidence 23357899999999999999999999999999999999 6777765433322221111 111234567789
Q ss_pred HHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 253 ELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 253 ~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
++.+|+.+||+.||.+|||+.++++.|..+...
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999998877543
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.7e-51 Score=385.09 Aligned_cols=252 Identities=23% Similarity=0.292 Sum_probs=209.7
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCCC-HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWPD-PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
++|+++++||+|+||+||+|+.. +++.||||+++...... .+.|.+|++++++++||||+++++++...+..+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~ 92 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 92 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence 46889999999999999999853 35789999997654332 467999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcE
Q 012608 99 LVAEYMPNETLAKHLFHWE----------------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRI 156 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Ni 156 (460)
++|||+++|+|.+++.... ...+++..++.|+.|++.||+|||+++ ||||||||+||
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~-ivHrDlKp~NI 171 (301)
T d1lufa_ 93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK-FVHRDLATRNC 171 (301)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGE
T ss_pred EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC-eEeeEEcccce
Confidence 9999999999999986421 235789999999999999999999999 99999999999
Q ss_pred EEcCCCCeEEccCCCcccCCC------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCC-CCCChhhhhh
Q 012608 157 LFDEDGNPRLSTFGLMKNSRD------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLI 229 (460)
Q Consensus 157 ll~~~~~~kl~DFg~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~-p~~~~~~~~~ 229 (460)
|++.++.+||+|||+++.... .....+|+.|+|||.+.+..+|.++|||||||++|||++|.. ||........
T Consensus 172 Lld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~ 251 (301)
T d1lufa_ 172 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 251 (301)
T ss_dssp EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred EECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHH
Confidence 999999999999999875432 234567889999999999999999999999999999999964 5554433333
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 230 RDRNLQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
....... .....+..+++++.+|+.+||+.+|++|||+.+|++.|+.+.
T Consensus 252 ~~~v~~~-----~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 252 IYYVRDG-----NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp HHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHHcC-----CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 2222111 112345677889999999999999999999999999998763
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-51 Score=386.77 Aligned_cols=243 Identities=19% Similarity=0.257 Sum_probs=208.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCC---CCCCHHHHHHHHHHHh-cCCCCccceeeeEEeeCCeeEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRM---AWPDPRQFLEEARSVG-QLRNNRLTNLLGCCCEGDERLLV 100 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~-~l~h~~iv~~~~~~~~~~~~~lv 100 (460)
++|++++.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+.++. .++||||+++++++..++..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 5789999999999999999995 56999999999643 2334567778887765 68999999999999999999999
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC--
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG-- 178 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~-- 178 (460)
|||++||+|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 82 mEy~~~g~L~~~i~~--~~~~~e~~~~~~~~qi~~al~ylH~~~-iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG-IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT-CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCcccceeecCCCceeccccchhhhcccccc
Confidence 999999999999974 457899999999999999999999999 999999999999999999999999999865432
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTELVR 256 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (460)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.....+....... ...++..+++++.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 232 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKD 232 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHH
Confidence 3457899999999999999999999999999999999999999876554443332221 12345667899999
Q ss_pred HHHHHcccCCCCCCChh-HHHH
Q 012608 257 LASRCLQYEPRERPNPK-SLVT 277 (460)
Q Consensus 257 li~~~l~~~p~~Rps~~-~il~ 277 (460)
||.+||+.||.+|||+. ++++
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~ 254 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQ 254 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGG
T ss_pred HHHHhcccCCCCCcCHHHHHHh
Confidence 99999999999999996 6765
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-51 Score=384.42 Aligned_cols=251 Identities=20% Similarity=0.216 Sum_probs=198.9
Q ss_pred hhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC-----HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 30 IVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD-----PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 30 i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
.++.||+|+||+||+|.. .+|+.||||+++...... .+.+.+|+.++++++|||||++++++..++..|+||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 467899999999999994 569999999987543221 34689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
+.|+++..... .+..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~-iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc-eecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 99887776654 4567999999999999999999999999 999999999999999999999999999765542 3
Q ss_pred CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccc--------------cc-----
Q 012608 180 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQML--------------TD----- 239 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--------------~~----- 239 (460)
...||+.|+|||++.+. .++.++|||||||++|||+||..||.+.............. ..
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 45689999999998754 47999999999999999999999887654322211110000 00
Q ss_pred ---ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 240 ---SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 240 ---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
...........++++.+|+.+||+.||++|||++|+++ .++.+.
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~--Hp~f~~ 285 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK--MKYFSN 285 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT--SGGGTS
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC--CHhhCC
Confidence 00000112345789999999999999999999999987 444443
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-51 Score=381.28 Aligned_cols=257 Identities=22% Similarity=0.277 Sum_probs=211.3
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc-CCc--EEEEEEecCCC-CCCHHHHHHHHHHHhcC-CCCccceeeeEEeeCCeeE
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE-NQR--RIAVKRFNRMA-WPDPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 98 (460)
+|+++++.++||+|+||+||+|++. +|. .||||+++... ....+.|.+|+++|.++ +||||+++++++..++..+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 5678899999999999999999953 454 47888876443 33466899999999999 7999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhcc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCe
Q 012608 99 LVAEYMPNETLAKHLFHW--------------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNP 164 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~ 164 (460)
+||||++||+|.+++... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~-iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC-ccccccccceEEEcCCCce
Confidence 999999999999998643 2367899999999999999999999999 9999999999999999999
Q ss_pred EEccCCCcccCCCC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCC-CCCChhhhhhhhccccccccc
Q 012608 165 RLSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRNLQMLTDS 240 (460)
Q Consensus 165 kl~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~ 240 (460)
||+|||+++..... ....||..|+|||.+.++.++.++|||||||++|||++|.. ||.......+.......
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~---- 242 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---- 242 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT----
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhc----
Confidence 99999998765432 34568999999999999999999999999999999999765 45544333333222111
Q ss_pred cccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 241 CLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
.....+..+++++.+||.+||+.||++|||+.++++.|+.+....
T Consensus 243 -~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~ 287 (309)
T d1fvra_ 243 -YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 287 (309)
T ss_dssp -CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 123455678899999999999999999999999999999887654
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.4e-51 Score=391.60 Aligned_cols=248 Identities=18% Similarity=0.163 Sum_probs=203.8
Q ss_pred CCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCC---CCCHHHHHH---HHHHHhcCCCCccceeeeEEeeCCe
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMA---WPDPRQFLE---EARSVGQLRNNRLTNLLGCCCEGDE 96 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~~iv~~~~~~~~~~~ 96 (460)
+.++|++++.||+|+||.||+|+. .+|+.||||++.... ......+.+ |+.+++.++|||||++++++..++.
T Consensus 2 slddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~ 81 (364)
T d1omwa3 2 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 81 (364)
T ss_dssp CSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred CHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCE
Confidence 356799999999999999999995 569999999985322 122333444 4777888899999999999999999
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.|+|||||+||+|.+++.. ...+++..++.++.||+.||.|||+++ ||||||||+|||++.+|.+||+|||+++...
T Consensus 82 ~~ivmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~-iiHrDlKP~NILl~~~g~iKl~DFGla~~~~ 158 (364)
T d1omwa3 82 LSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLACDFS 158 (364)
T ss_dssp EEEEECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred EEEEEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHCC-ccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence 9999999999999999874 467899999999999999999999999 9999999999999999999999999998765
Q ss_pred CC--CCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhHHH
Q 012608 177 DG--KSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDGTE 253 (460)
Q Consensus 177 ~~--~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (460)
.. ....||+.|||||++.. ..++.++|||||||++|+|+||+.||.............. .......++..++++
T Consensus 159 ~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~ 235 (364)
T d1omwa3 159 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---TLTMAVELPDSFSPE 235 (364)
T ss_dssp SSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHH---SSSCCCCCCSSSCHH
T ss_pred CCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---cccCCCCCCCCCCHH
Confidence 43 45679999999999975 4589999999999999999999999976432211110000 011122345678899
Q ss_pred HHHHHHHHcccCCCCCCC-----hhHHHH
Q 012608 254 LVRLASRCLQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 254 l~~li~~~l~~~p~~Rps-----~~~il~ 277 (460)
+.+||.+||+.||.+||| ++++++
T Consensus 236 ~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 236 LRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp HHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred HHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 999999999999999999 688876
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-51 Score=381.16 Aligned_cols=254 Identities=21% Similarity=0.278 Sum_probs=208.0
Q ss_pred CcccchhcccCCCCCCeEEEEEEc-C-------CcEEEEEEecCCCCCC-HHHHHHHHHHHhcC-CCCccceeeeEEeeC
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKLE-N-------QRRIAVKRFNRMAWPD-PRQFLEEARSVGQL-RNNRLTNLLGCCCEG 94 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~~-~-------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~ 94 (460)
.++|++++.||+|+||.||+|+.. . +..||||+++...... ...+.+|+..+.++ +|||||++++++..+
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~ 91 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 91 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence 368999999999999999999842 2 2479999997655332 46788999999999 899999999999999
Q ss_pred CeeEEEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC
Q 012608 95 DERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~ 160 (460)
+..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ ||||||||+|||++.
T Consensus 92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~-ivHrDiKp~NiLl~~ 170 (299)
T d1fgka_ 92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK-CIHRDLAARNVLVTE 170 (299)
T ss_dssp SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECT
T ss_pred CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC-EEeeeecccceeecC
Confidence 99999999999999999997532 245899999999999999999999999 999999999999999
Q ss_pred CCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhh-CCCCCCChhhhhhhhcc
Q 012608 161 DGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 233 (460)
Q Consensus 161 ~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 233 (460)
++.+||+|||+++..... ....+|+.|+|||.+.++.++.++|||||||++|||+| |..||............
T Consensus 171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i 250 (299)
T d1fgka_ 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 250 (299)
T ss_dssp TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHH
Confidence 999999999998855432 33567899999999999999999999999999999998 57676654443332221
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
. .......+..+++++.+||.+||+.||.+|||+.++++.|+.+..
T Consensus 251 ~-----~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 251 K-----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp H-----TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-----cCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 1 112234556778999999999999999999999999999988753
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-50 Score=375.25 Aligned_cols=256 Identities=20% Similarity=0.288 Sum_probs=203.1
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC--CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP--DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
++|+++++||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 5789999999999999999995 67999999999754422 35789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
|+.| ++.+.+.......+++..+..++.||+.||+|||++| ||||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~-IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~ 159 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC-EEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence 9975 4545554445677999999999999999999999999 999999999999999999999999998765432
Q ss_pred CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc--------------ccccc---c
Q 012608 179 KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--------------QMLTD---S 240 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------~~~~~---~ 240 (460)
....||+.|+|||.+.... .+.++|||||||++|+|++|+.||.+........... ..... .
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3457899999999987665 5789999999999999999999997653221111000 00000 0
Q ss_pred ccc------CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 241 CLE------GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 241 ~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
... ......+++++.+|+.+||+.||++|||++++++ .++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~--H~ff~~ 288 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA--HPFFQD 288 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT--SGGGTT
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC--CHhhcc
Confidence 000 0011245688999999999999999999999998 344443
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-51 Score=381.74 Aligned_cols=255 Identities=22% Similarity=0.271 Sum_probs=198.2
Q ss_pred CCcccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeC-
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEG- 94 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~- 94 (460)
..++|+++++||+|+||.||+|... +++.||||+++..... ..+.+.+|+.++.++ +|+||+.+++++...
T Consensus 11 ~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~ 90 (299)
T d1ywna1 11 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 90 (299)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence 3467999999999999999999842 3468999998754432 255788888888887 789999999998654
Q ss_pred CeeEEEEEcCCCCCHHhhhhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC
Q 012608 95 DERLLVAEYMPNETLAKHLFHWE--------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE 160 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~ 160 (460)
+..++|||||+||+|.+++.... ...+++..+..++.||+.||.|||+++ |+||||||+|||+++
T Consensus 91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~-ivHrDlKp~NILl~~ 169 (299)
T d1ywna1 91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK-CIHRDLAARNILLSE 169 (299)
T ss_dssp SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECG
T ss_pred CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC-CcCCcCCccceeECC
Confidence 46899999999999999986432 235889999999999999999999999 999999999999999
Q ss_pred CCCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCC-CCCChhhhhhhhcc
Q 012608 161 DGNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKH-IPPSHALDLIRDRN 233 (460)
Q Consensus 161 ~~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~-p~~~~~~~~~~~~~ 233 (460)
++.+||+|||+++..... ....||+.|||||.+.+..++.++|||||||++|||+||.. ||............
T Consensus 170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~ 249 (299)
T d1ywna1 170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 249 (299)
T ss_dssp GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH
T ss_pred CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 999999999999754432 24568999999999999999999999999999999999764 55433221111111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
. ........+..+++++.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 250 ~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 250 L----KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp H----HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H----hcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 0 111122445667889999999999999999999999999998764
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-49 Score=371.26 Aligned_cols=248 Identities=25% Similarity=0.316 Sum_probs=202.3
Q ss_pred hcccCCCCCCeEEEEEEcC--C--cEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEee-CCeeEEEEEcC
Q 012608 31 VSEHGEKAPNVVYKGKLEN--Q--RRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCE-GDERLLVAEYM 104 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e~~ 104 (460)
-+.||+|+||+||+|++.+ + ..||||+++..... ..++|.+|++++++++||||++++|++.. ++..++|||||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 4578999999999999643 2 35899999754322 35679999999999999999999999875 46889999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC------
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG------ 178 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~------ 178 (460)
++++|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 112 ~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~-iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~ 189 (311)
T d1r0pa_ 112 KHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 189 (311)
T ss_dssp TTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTT
T ss_pred ecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC-cccCCccHHhEeECCCCCEEEecccchhhccccccccce
Confidence 99999998864 4456788899999999999999999999 999999999999999999999999999865432
Q ss_pred --CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhh-hhhccccccccccccCCCCchhHHHHH
Q 012608 179 --KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDL-IRDRNLQMLTDSCLEGQFTDDDGTELV 255 (460)
Q Consensus 179 --~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 255 (460)
....||+.|+|||.+.+..++.++||||||+++|||+||+.||....... +...... ......+..+++++.
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~-----g~~~~~p~~~~~~l~ 264 (311)
T d1r0pa_ 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-----GRRLLQPEYCPDPLY 264 (311)
T ss_dssp CTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHT-----TCCCCCCTTCCHHHH
T ss_pred ecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCcccCcHHHH
Confidence 23457899999999998999999999999999999999888776543211 1111111 111234556778999
Q ss_pred HHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 256 RLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 256 ~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
+++.+||+.||++|||+.+|++.|+.+...
T Consensus 265 ~li~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 265 EVMLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999999988754
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-50 Score=378.47 Aligned_cols=254 Identities=20% Similarity=0.290 Sum_probs=209.2
Q ss_pred cccchhcccCCCCCCeEEEEEE------cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcC-CCCccceeeeEEeeCCee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL------ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQL-RNNRLTNLLGCCCEGDER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 97 (460)
+++++.+.||+|+||.||+|++ .+++.||||+++..... ....+.+|+.+++++ +|||||++++++..++..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 5788999999999999999984 24678999999765433 245789999999999 799999999999999999
Q ss_pred EEEEEcCCCCCHHhhhhccC----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCC
Q 012608 98 LLVAEYMPNETLAKHLFHWE----------------THPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDED 161 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~ 161 (460)
++|||||+||+|.+++.... ...+++..+..++.||+.||+|||+++ ++||||||+||+++.+
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~-ivHrDLKp~NIl~~~~ 181 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNILLTHG 181 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCSGGGEEEETT
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccccccccccccc
Confidence 99999999999999987532 236889999999999999999999999 9999999999999999
Q ss_pred CCeEEccCCCcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCC-CCChhhhhhhhccc
Q 012608 162 GNPRLSTFGLMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHI-PPSHALDLIRDRNL 234 (460)
Q Consensus 162 ~~~kl~DFg~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p-~~~~~~~~~~~~~~ 234 (460)
+.+|++|||+++..... ....||+.|+|||.+.++.++.++|||||||++|||+|++.| +...........
T Consensus 182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~-- 259 (311)
T d1t46a_ 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK-- 259 (311)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH--
T ss_pred CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHH--
Confidence 99999999999865543 234678999999999989999999999999999999995444 433222111111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 235 QMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
..........+..+++++.+||.+||+.||.+|||+.++++.|+....
T Consensus 260 --~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 260 --MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp --HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 111112223445677899999999999999999999999999987643
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.7e-49 Score=369.32 Aligned_cols=249 Identities=17% Similarity=0.237 Sum_probs=203.4
Q ss_pred cccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEEc
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAEY 103 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 103 (460)
++|+++++||+|+||+||+|+..+|+.||||+++.... ...+.+.+|+.+|++++||||+++++++..++..+++||+
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 57899999999999999999988999999999976432 2357899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----C
Q 012608 104 MPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG----K 179 (460)
Q Consensus 104 ~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~----~ 179 (460)
+.++.+..+.. ..+.+++..+..++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||.+...... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~-IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (286)
T d1ob3a_ 82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR-VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (286)
T ss_dssp CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc-EEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence 98777666654 4577999999999999999999999999 999999999999999999999999998765432 3
Q ss_pred CccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc-----------------------c
Q 012608 180 SYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL-----------------------Q 235 (460)
Q Consensus 180 ~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~-----------------------~ 235 (460)
...+++.|+|||.+.+. .++.++|||||||++|||++|+.||.+........... .
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 45688999999998754 46899999999999999999999986543221111000 0
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
...............++++.+|+.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 001111112334566789999999999999999999999986
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-49 Score=372.69 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=209.5
Q ss_pred cccchhcccCCCCCCeEEEEEEc------CCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCCeeE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKLE------NQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGDERL 98 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (460)
++++++++||+|+||+||+|.+. +++.||||+++..... ....|.+|+.++++++||||+++++++..++..+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 57899999999999999999853 3578999999754322 2346899999999999999999999999999999
Q ss_pred EEEEcCCCCCHHhhhhcc--------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCC
Q 012608 99 LVAEYMPNETLAKHLFHW--------ETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFG 170 (460)
Q Consensus 99 lv~e~~~g~sL~~~~~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg 170 (460)
+||||+++|+|.+++... ....+++..+..++.|++.||.|||+++ |+||||||+|||+++++++||+|||
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~-ivHrDlk~~NiLld~~~~~Kl~DFG 178 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-FVHRDLAARNCMVAEDFTVKIGDFG 178 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT-CBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC-eeeceEcCCceeecCCceEEEeecc
Confidence 999999999999988642 1235788999999999999999999999 9999999999999999999999999
Q ss_pred CcccCCCC------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCC-CCCCChhhhhhhhcccccccccccc
Q 012608 171 LMKNSRDG------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGK-HIPPSHALDLIRDRNLQMLTDSCLE 243 (460)
Q Consensus 171 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 243 (460)
+++..... ....+|+.|+|||.+.+..++.++|||||||++|||+||. .|+.+............. ..
T Consensus 179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~-----~~ 253 (308)
T d1p4oa_ 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-----GL 253 (308)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-----CC
T ss_pred cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-----CC
Confidence 99865432 2345789999999999999999999999999999999996 555544333332222111 11
Q ss_pred CCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccc
Q 012608 244 GQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQ 283 (460)
Q Consensus 244 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~ 283 (460)
...+..+++.+.++|.+||+.+|.+|||++++++.|+...
T Consensus 254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~ 293 (308)
T d1p4oa_ 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 293 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 2345567789999999999999999999999999987764
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-50 Score=371.88 Aligned_cols=237 Identities=19% Similarity=0.289 Sum_probs=200.3
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC------CHHHHHHHHHHHhcCC--CCccceeeeEEeeCCe
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP------DPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~ 96 (460)
++|++.+.||+|+||+||+|+. .+|+.||||+++..... ....+.+|+.++++++ ||||+++++++..++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 3689999999999999999994 57999999998754322 1244778999999996 8999999999999999
Q ss_pred eEEEEEcCCC-CCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-CCCeEEccCCCccc
Q 012608 97 RLLVAEYMPN-ETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-DGNPRLSTFGLMKN 174 (460)
Q Consensus 97 ~~lv~e~~~g-~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-~~~~kl~DFg~a~~ 174 (460)
.++||||+.+ +++.+++.. .+.+++..++.++.||+.||.|||+++ |+||||||+|||++. ++.+||+|||+++.
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~~-iiHrDiKp~NIll~~~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG-VLHRDIKDENILIDLNRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CccccCcccceEEecCCCeEEECcccccee
Confidence 9999999976 577777763 467999999999999999999999999 999999999999985 47899999999986
Q ss_pred CCCC--CCccCCCcccCccccccCCC-CCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCCchhH
Q 012608 175 SRDG--KSYSTNLAFTPPEYLRTGRV-TPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTDDDG 251 (460)
Q Consensus 175 ~~~~--~~~~~t~~y~aPE~~~~~~~-~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (460)
.... ....||+.|+|||++.+..+ +.++|||||||++|+|+||+.||..... .... ...++..++
T Consensus 161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--i~~~----------~~~~~~~~s 228 (273)
T d1xwsa_ 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRG----------QVFFRQRVS 228 (273)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHC----------CCCCSSCCC
T ss_pred cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--Hhhc----------ccCCCCCCC
Confidence 5433 45679999999999987765 5679999999999999999999876421 1111 112445677
Q ss_pred HHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 252 TELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 252 ~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
+++.+||.+||+.||++|||++++++
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 89999999999999999999999987
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-49 Score=370.78 Aligned_cols=251 Identities=20% Similarity=0.215 Sum_probs=200.4
Q ss_pred CcccchhcccCCCCCCeEEEEEE-cC-CcEEEEEEecCCCC--CCHHHHHHHHHHHhcC---CCCccceeeeEEee----
Q 012608 25 FAVENIVSEHGEKAPNVVYKGKL-EN-QRRIAVKRFNRMAW--PDPRQFLEEARSVGQL---RNNRLTNLLGCCCE---- 93 (460)
Q Consensus 25 f~~~~i~~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~~iv~~~~~~~~---- 93 (460)
-++|+++++||+|+||+||+|+. .+ ++.||||+++.... .....+.+|+.+++.| +||||+++++++..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 36799999999999999999995 44 67799999865332 2244677888887776 79999999999853
Q ss_pred -CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCc
Q 012608 94 -GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLM 172 (460)
Q Consensus 94 -~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a 172 (460)
....+++|||++|+++.... ......+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~-ivHrDiKp~NILi~~~~~~kl~dfg~~ 163 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSHR-VVHRDLKPQNILVTSSGQIKLADFGLA 163 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred cCceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhCC-EEecCCCccEEEEcCCCCeeecchhhh
Confidence 24678999999977665433 335667999999999999999999999999 999999999999999999999999998
Q ss_pred ccCCC---CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccc--------------
Q 012608 173 KNSRD---GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ-------------- 235 (460)
Q Consensus 173 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------------- 235 (460)
+.... .....||+.|+|||++.+..++.++||||+||++|||+||+.||.+............
T Consensus 164 ~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 243 (305)
T d1blxa_ 164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 243 (305)
T ss_dssp CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTC
T ss_pred hhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccc
Confidence 76543 2466789999999999999999999999999999999999999976533221111000
Q ss_pred -------ccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 236 -------MLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 236 -------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
..........+...+++.+.+||.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 244 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp SSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000111112234567789999999999999999999999987
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-49 Score=367.50 Aligned_cols=252 Identities=16% Similarity=0.212 Sum_probs=194.5
Q ss_pred ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHH--HHHHhcCCCCccceeeeEEeeCC----eeEEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEE--ARSVGQLRNNRLTNLLGCCCEGD----ERLLV 100 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E--~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 100 (460)
++-+.++||+|+||.||+|++ +|+.||||+++... .+.+.+| +..+.+++||||+++++++...+ ..++|
T Consensus 4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv 79 (303)
T d1vjya_ 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence 456678899999999999997 68999999986532 3444444 45556789999999999997654 57899
Q ss_pred EEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh--------CCCcccccccCCcEEEcCCCCeEEccCCCc
Q 012608 101 AEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS--------KGRALYHDLNAYRILFDEDGNPRLSTFGLM 172 (460)
Q Consensus 101 ~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--------~~~iiH~Dikp~Nill~~~~~~kl~DFg~a 172 (460)
|||+++|+|.+++.. .++++..++.++.|++.||.|+|+ ++ |+||||||+|||++.++.+||+|||++
T Consensus 80 ~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~-IvHrDlKp~NILl~~~~~~Kl~DFGl~ 155 (303)
T d1vjya_ 80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA-IAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE-EECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC-eeccccCccceEEcCCCCeEEEecCcc
Confidence 999999999999964 469999999999999999999997 46 999999999999999999999999998
Q ss_pred ccCCCC--------CCccCCCcccCccccccCC------CCCCCceehHHHHHHHHhhCCCCCCChhhh-----------
Q 012608 173 KNSRDG--------KSYSTNLAFTPPEYLRTGR------VTPESVIYSFGTLLLDLLSGKHIPPSHALD----------- 227 (460)
Q Consensus 173 ~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~sDi~slG~~l~el~tg~~p~~~~~~~----------- 227 (460)
+..... ....||+.|+|||++.+.. ++.++|||||||++|||+||..|+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T d1vjya_ 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence 765332 2456899999999987542 577899999999999999998765322110
Q ss_pred ----hhhhccccccccccccCC-CCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccccC
Q 012608 228 ----LIRDRNLQMLTDSCLEGQ-FTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKET 286 (460)
Q Consensus 228 ----~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~~ 286 (460)
............+..+.. .....+..+.+++.+||+.||.+|||+.+|++.|+.+..+.
T Consensus 236 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 299 (303)
T d1vjya_ 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence 000000110111111111 12335567999999999999999999999999999887543
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-47 Score=362.62 Aligned_cols=258 Identities=17% Similarity=0.196 Sum_probs=199.8
Q ss_pred cCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCC--CCHHHHHHHHHHHhcCCCCccceeeeEEee------
Q 012608 23 SGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAW--PDPRQFLEEARSVGQLRNNRLTNLLGCCCE------ 93 (460)
Q Consensus 23 ~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 93 (460)
+..++|+++++||+|+||+||+|+. .+|+.||||++..... .....+.+|+.+|++++||||+++++++..
T Consensus 7 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 7 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 86 (318)
T ss_dssp CBGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred CccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence 4568899999999999999999995 5799999999865432 235779999999999999999999999854
Q ss_pred --CCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCC
Q 012608 94 --GDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGL 171 (460)
Q Consensus 94 --~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~ 171 (460)
++..++||||+.++++..... ....+++..++.++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~-ivHrDlKp~NILl~~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK-ILHRDMKAANVLITRDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC-EEecCcCchheeecCCCcEEeeecce
Confidence 345789999998776665443 4567899999999999999999999999 99999999999999999999999999
Q ss_pred cccCCC--------CCCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcccccccc---
Q 012608 172 MKNSRD--------GKSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTD--- 239 (460)
Q Consensus 172 a~~~~~--------~~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 239 (460)
++.... .....||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+................
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 875442 2345689999999998765 5899999999999999999999998754332221111000000
Q ss_pred cc--------------ccCCCCc---------hhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 240 SC--------------LEGQFTD---------DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 240 ~~--------------~~~~~~~---------~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
.. ....... ..++.+.+||.+||+.||++|||++|+++ .++...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~--Hpff~~ 310 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFWS 310 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGSS
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc--Chhhcc
Confidence 00 0000000 12457789999999999999999999998 555544
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-48 Score=367.74 Aligned_cols=246 Identities=18% Similarity=0.249 Sum_probs=195.9
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCC------e
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGD------E 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~ 96 (460)
+.|+++++||+|+||+||+|.. .+|+.||||+++...... .+.+.+|+++|++++|||||++++++...+ .
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 4689999999999999999995 569999999997654332 457889999999999999999999997654 4
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
+|+||||+ |.+|...+. .+.+++..++.++.||+.||.|||++| |+||||||+|||++.++.+|++|||+++...
T Consensus 98 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~-IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~ 172 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAG-IIHRDLKPGNLAVNEDCELKILDFGLARQAD 172 (346)
T ss_dssp CEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCcchhhcccccccccccccceeccC
Confidence 69999999 578888774 457999999999999999999999999 9999999999999999999999999998765
Q ss_pred CC-CCccCCCcccCccccccC-CCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc---------------------
Q 012608 177 DG-KSYSTNLAFTPPEYLRTG-RVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------------- 233 (460)
Q Consensus 177 ~~-~~~~~t~~y~aPE~~~~~-~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~--------------------- 233 (460)
.. ....||+.|+|||.+.+. .++.++||||+||++|+|++|+.||.+..........
T Consensus 173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T d1cm8a_ 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252 (346)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence 43 456789999999998764 4689999999999999999999998664321111000
Q ss_pred -----ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 -----LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 -----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
....... .........++++.+||.+||+.||.+|||+.++++
T Consensus 253 ~~~~~~~~~~~~-~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~ 300 (346)
T d1cm8a_ 253 NYMKGLPELEKK-DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300 (346)
T ss_dssp HHHHHSCCCCCC-CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhhccCCccccc-chHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000001 111233456789999999999999999999999998
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=5.9e-48 Score=366.08 Aligned_cols=258 Identities=16% Similarity=0.185 Sum_probs=205.5
Q ss_pred cccCHHHHHHHhcCCcccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcC-CCCccceee
Q 012608 11 REFTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQL-RNNRLTNLL 88 (460)
Q Consensus 11 ~~~~~~~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 88 (460)
..|+++....-.++.++|+++++||+|+||+||+|+. .+|+.||||+++.. ..+.+.+|+.+|+++ +||||++++
T Consensus 20 ~~~~~~~~~~~~~~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~ 96 (328)
T d3bqca1 20 EYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLA 96 (328)
T ss_dssp HHHCGGGCCCCCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEE
T ss_pred ccchhhhcccCCCCCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEE
Confidence 3455544444456778899999999999999999995 57999999998753 367899999999999 499999999
Q ss_pred eEEeeC--CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-CeE
Q 012608 89 GCCCEG--DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPR 165 (460)
Q Consensus 89 ~~~~~~--~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-~~k 165 (460)
+++... ...++||||+++++|.... +.+++..++.++.||+.||.|||++| |+||||||+|||++.++ .+|
T Consensus 97 ~~~~~~~~~~~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~g-IvHrDiKp~NILi~~~~~~vk 170 (328)
T d3bqca1 97 DIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMIDHEHRKLR 170 (328)
T ss_dssp EEEECTTTCSEEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEEETTTTEEE
T ss_pred EEEEecCCCceeEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcc-cccccccccceEEcCCCCeee
Confidence 998743 5689999999999997754 46999999999999999999999999 99999999999998655 589
Q ss_pred EccCCCcccCCCC---CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhh------------
Q 012608 166 LSTFGLMKNSRDG---KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLI------------ 229 (460)
Q Consensus 166 l~DFg~a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~------------ 229 (460)
|+|||+++..... ....+|+.|+|||.+.+.. ++.++||||+||++++|++|+.||........
T Consensus 171 l~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~ 250 (328)
T d3bqca1 171 LIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 250 (328)
T ss_dssp ECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHH
T ss_pred ecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCc
Confidence 9999999865533 4557899999999987654 78999999999999999999998854321100
Q ss_pred ------hhcc--------------ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 230 ------RDRN--------------LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 230 ------~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.... ................+++++.+||.+||+.||.+|||++++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 251 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp HHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 00000111111223456789999999999999999999999987
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-47 Score=354.78 Aligned_cols=249 Identities=18% Similarity=0.221 Sum_probs=204.5
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeCCeeEEEEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEGDERLLVAE 102 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 102 (460)
.+|+++++||+|+||+||+|+. .+|+.||||+++...... ...+.+|+.++++++||||+++++++...+..++|++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 5799999999999999999995 579999999997654332 5789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCCC----
Q 012608 103 YMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRDG---- 178 (460)
Q Consensus 103 ~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~~---- 178 (460)
++.|++|..++. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||.++.....
T Consensus 82 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~-IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~ 158 (292)
T d1unla_ 82 FCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN-VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred eccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcCC-EeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence 999999888776 4567899999999999999999999999 999999999999999999999999999876543
Q ss_pred CCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChh-hhhhhhc-----------------------c
Q 012608 179 KSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHA-LDLIRDR-----------------------N 233 (460)
Q Consensus 179 ~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~-~~~~~~~-----------------------~ 233 (460)
....++..|+|||.+.+.. ++.++|||||||++|||++|+.||.... ....... .
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 2345678899999987665 6899999999999999999998864321 1110000 0
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
................+++.+.+|+.+||+.||.+|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00001111122334556789999999999999999999999987
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-47 Score=365.98 Aligned_cols=248 Identities=17% Similarity=0.233 Sum_probs=193.9
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCC-CHHHHHHHHHHHhcCCCCccceeeeEEeeCC----eeEE
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWP-DPRQFLEEARSVGQLRNNRLTNLLGCCCEGD----ERLL 99 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~l 99 (460)
+.|++++.||+|+||+||+|+. .+|+.||||++...... ..+.+.+|+.+|++++||||+++++++.... ..++
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~ 87 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 87 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence 3599999999999999999984 57999999999754422 2567889999999999999999999986543 2345
Q ss_pred EEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC--
Q 012608 100 VAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD-- 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~-- 177 (460)
+++++.|++|.+++.. ..+++..++.++.|++.||+|||++| ||||||||+|||++.++.+||+|||++.....
T Consensus 88 l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~-iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~ 163 (345)
T d1pmea_ 88 LVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN-VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 163 (345)
T ss_dssp EEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT-EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence 5566678999999853 46999999999999999999999999 99999999999999999999999999875432
Q ss_pred -----CCCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc---------------
Q 012608 178 -----GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM--------------- 236 (460)
Q Consensus 178 -----~~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------------- 236 (460)
.....||+.|+|||++.. ..++.++||||+||++|+|++|+.||...............
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T d1pmea_ 164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 243 (345)
T ss_dssp CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhh
Confidence 234568999999999854 45788999999999999999999998754321111100000
Q ss_pred --------c--ccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 237 --------L--TDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 237 --------~--~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
. ..........+..++++.+|+.+||+.||.+|||++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~ 294 (345)
T d1pmea_ 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294 (345)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 0000001122345678999999999999999999999997
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-47 Score=361.83 Aligned_cols=246 Identities=21% Similarity=0.221 Sum_probs=194.4
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCccceeeeEEeeC------CeeEE
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRLTNLLGCCCEG------DERLL 99 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~~l 99 (460)
.|+.++.||+|+||+||+|+. .+|+.||||+++.... ...+|+.+|++++||||+++++++... ...++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 578889999999999999995 5699999999976432 234799999999999999999998543 24789
Q ss_pred EEEcCCCCCHHhhhh-ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCC-CeEEccCCCcccCCC
Q 012608 100 VAEYMPNETLAKHLF-HWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDG-NPRLSTFGLMKNSRD 177 (460)
Q Consensus 100 v~e~~~g~sL~~~~~-~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~-~~kl~DFg~a~~~~~ 177 (460)
|||||+++.+..+.. ......+++..++.++.||+.||+|||++| |+||||||+|||++.++ .+||+|||++.....
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~-IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC-CcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 999998664433322 124567999999999999999999999999 99999999999999775 899999999886543
Q ss_pred ---CCCccCCCcccCcccccc-CCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhcc--------------------
Q 012608 178 ---GKSYSTNLAFTPPEYLRT-GRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------------- 233 (460)
Q Consensus 178 ---~~~~~~t~~y~aPE~~~~-~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~-------------------- 233 (460)
.....||..|+|||.+.+ ..++.++||||+||++|||++|+.||............
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 345678999999998875 45899999999999999999999998765322111100
Q ss_pred ---ccccccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHH
Q 012608 234 ---LQMLTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVT 277 (460)
Q Consensus 234 ---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 277 (460)
.................++++.+|+.+||+.||.+|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 302 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01111111112233456789999999999999999999999997
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2e-47 Score=357.61 Aligned_cols=253 Identities=15% Similarity=0.140 Sum_probs=199.9
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCc-cceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR-LTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.|+++++||+|+||+||+|+. .+|+.||||++..... ..++.+|+++++.++|+| |+.+.+++..++..++||||+
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 589999999999999999995 5699999999876442 346889999999997666 555566667888899999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEc---CCCCeEEccCCCcccCCCC---
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFD---EDGNPRLSTFGLMKNSRDG--- 178 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~---~~~~~kl~DFg~a~~~~~~--- 178 (460)
. ++|.+.+.. ..+.+++..+..++.|++.||+|||+++ |+||||||+|||++ .+..+||+|||+++.....
T Consensus 86 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~-iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 86 G-PSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN-FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp C-CBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT-EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred C-Cchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC-eeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 5 677666543 4567999999999999999999999999 99999999999985 4567999999999865432
Q ss_pred --------CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccc--cccccccccCCCCc
Q 012608 179 --------KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNL--QMLTDSCLEGQFTD 248 (460)
Q Consensus 179 --------~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 248 (460)
....||+.|||||.+.+..++.++|||||||++|||+||+.||............. .......+......
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhcc
Confidence 34578999999999999899999999999999999999999986543221111100 00000011112344
Q ss_pred hhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 249 DDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
.+|+++.+++.+||+.+|.+||++.++.+.|+.+..
T Consensus 243 ~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence 677899999999999999999999999988887654
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.6e-47 Score=355.05 Aligned_cols=254 Identities=15% Similarity=0.152 Sum_probs=206.4
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCC-CccceeeeEEeeCCeeEEEEEcC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEGDERLLVAEYM 104 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~ 104 (460)
.|++++.||+|+||+||+|+. .+|+.||||++.... +...+.+|+++++.++| +||+.+++++..+...++||||+
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 589999999999999999994 569999999986543 33467889999999964 89999999999999999999999
Q ss_pred CCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcC-----CCCeEEccCCCcccCCC--
Q 012608 105 PNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDE-----DGNPRLSTFGLMKNSRD-- 177 (460)
Q Consensus 105 ~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~-----~~~~kl~DFg~a~~~~~-- 177 (460)
|++|.+++.. .+..++...+..++.|++.||+|||++| |+||||||+|||++. ++.+||+|||+++....
T Consensus 84 -~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g-iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 84 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS-LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT-EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 6899998864 4557999999999999999999999999 999999999999974 57899999999986532
Q ss_pred ---------CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhc--cccccccccccCCC
Q 012608 178 ---------GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDR--NLQMLTDSCLEGQF 246 (460)
Q Consensus 178 ---------~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~ 246 (460)
.....||+.|||||++.+..++.++|||||||++|||+||+.||.+......... ..............
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence 2345789999999999998999999999999999999999999864322111000 00000011111223
Q ss_pred CchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcccccc
Q 012608 247 TDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQKE 285 (460)
Q Consensus 247 ~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~~ 285 (460)
...+|+++.+++..|+..+|++||+++.+.+.|+.+...
T Consensus 241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~ 279 (293)
T d1csna_ 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279 (293)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence 445678999999999999999999999999888876544
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-48 Score=361.97 Aligned_cols=249 Identities=18% Similarity=0.243 Sum_probs=204.2
Q ss_pred CCcccchhcccCCCCCCeEEEEEE----cCCcEEEEEEecCCC----CCCHHHHHHHHHHHhcCCC-CccceeeeEEeeC
Q 012608 24 GFAVENIVSEHGEKAPNVVYKGKL----ENQRRIAVKRFNRMA----WPDPRQFLEEARSVGQLRN-NRLTNLLGCCCEG 94 (460)
Q Consensus 24 ~f~~~~i~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~ 94 (460)
+.++|++++.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+.++++++| |||+++++++...
T Consensus 22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~ 101 (322)
T d1vzoa_ 22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 101 (322)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence 457799999999999999999984 248899999986432 2235678899999999965 8999999999999
Q ss_pred CeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCccc
Q 012608 95 DERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKN 174 (460)
Q Consensus 95 ~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~ 174 (460)
+..+++|||+.|++|.+++.. .+.+++..+..++.||+.||.|+|+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 102 ~~~~~v~e~~~~~~L~~~i~~--~~~~~e~~~~~~~~Qi~~al~~lH~~~-ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 102 TKLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG-IIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp TEEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred CceeeeeecccccHHHHHHHh--cccccHHHHHHHHHHHHHHHHHhhcCC-EEeccCCccceeecCCCCEEEeeccchhh
Confidence 999999999999999999874 456788999999999999999999999 99999999999999999999999999876
Q ss_pred CCC-----CCCccCCCcccCccccccCC--CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccccccccccCCCC
Q 012608 175 SRD-----GKSYSTNLAFTPPEYLRTGR--VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFT 247 (460)
Q Consensus 175 ~~~-----~~~~~~t~~y~aPE~~~~~~--~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (460)
... .....|++.|++||.+.+.. ++.++|||||||++|+|+||+.||.................. ....++
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~--~~~~~~ 256 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYP 256 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCC
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--CCCCCc
Confidence 532 23457899999999997643 688999999999999999999999765332221111111111 112345
Q ss_pred chhHHHHHHHHHHHcccCCCCCCC-----hhHHHH
Q 012608 248 DDDGTELVRLASRCLQYEPRERPN-----PKSLVT 277 (460)
Q Consensus 248 ~~~~~~l~~li~~~l~~~p~~Rps-----~~~il~ 277 (460)
..+++++.+++.+||++||.+||| ++|+++
T Consensus 257 ~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 257 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 578899999999999999999995 788876
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-46 Score=358.24 Aligned_cols=252 Identities=16% Similarity=0.197 Sum_probs=198.2
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEeeC-----Cee
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCEG-----DER 97 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 97 (460)
++|+++++||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+++|++++||||+++++++... ...
T Consensus 18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~ 97 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 97 (348)
T ss_dssp TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence 3699999999999999999994 579999999997654332 45788999999999999999999998643 334
Q ss_pred EEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCCC
Q 012608 98 LLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSRD 177 (460)
Q Consensus 98 ~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~~ 177 (460)
+++|+++.|++|.+++. .+.+++..++.++.||+.||+|||++| |+||||||+|||++.++.+|++|||++.....
T Consensus 98 ~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~g-iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~ 173 (348)
T d2gfsa1 98 VYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSAD-IIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173 (348)
T ss_dssp CEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred EEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhCC-CcccccCCccccccccccccccccchhcccCc
Confidence 66777888999999884 457999999999999999999999999 99999999999999999999999999876543
Q ss_pred -CCCccCCCcccCccccccCC-CCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc-------------------
Q 012608 178 -GKSYSTNLAFTPPEYLRTGR-VTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM------------------- 236 (460)
Q Consensus 178 -~~~~~~t~~y~aPE~~~~~~-~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~------------------- 236 (460)
.....||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||.+.............
T Consensus 174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
T d2gfsa1 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253 (348)
T ss_dssp GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence 34567889999999877654 688999999999999999999998765322111110000
Q ss_pred -------cccccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 237 -------LTDSCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 237 -------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
...... .......++++.+||.+||+.||.+|||+.|+++ .++..
T Consensus 254 ~~~~~~~~~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~--Hp~f~ 305 (348)
T d2gfsa1 254 YIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA--HAYFA 305 (348)
T ss_dssp HHTTSCCCCCCCH-HHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT--SGGGT
T ss_pred hhhhcccCCCcch-hhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc--CHhhC
Confidence 000000 0011345688999999999999999999999998 34443
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-46 Score=356.90 Aligned_cols=251 Identities=16% Similarity=0.212 Sum_probs=191.7
Q ss_pred cccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCC--HHHHHHHHHHHhcCCCCccceeeeEEee------CCe
Q 012608 26 AVENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPD--PRQFLEEARSVGQLRNNRLTNLLGCCCE------GDE 96 (460)
Q Consensus 26 ~~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~~ 96 (460)
.+|++++.||+|+||+||+|.. .+|+.||||+++...... ...+.+|+.++++++||||+++++++.. .+.
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 4699999999999999999995 469999999997654332 4568899999999999999999999863 367
Q ss_pred eEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccCCCcccCC
Q 012608 97 RLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTFGLMKNSR 176 (460)
Q Consensus 97 ~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~~~~ 176 (460)
.|+||||+.|+.+. .+. ..+++..++.++.||+.||.|||+.| |+||||||+|||++.++.++++|||+++...
T Consensus 97 ~~iv~Ey~~~~l~~-~~~----~~~~~~~i~~~~~qil~gl~~LH~~g-iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~ 170 (355)
T d2b1pa1 97 VYLVMELMDANLCQ-VIQ----MELDHERMSYLLYQMLCGIKHLHSAG-IIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_dssp EEEEEECCSEEHHH-HHT----SCCCHHHHHHHHHHHHHHHHHHHHTT-CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred eEEEEeccchHHHH-hhh----cCCCHHHHHHHHHHHHHHHHHhhhcc-cccccCCccccccccccceeeechhhhhccc
Confidence 89999999865554 442 46899999999999999999999999 9999999999999999999999999887654
Q ss_pred CC---CCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhhhhccccc-----------------
Q 012608 177 DG---KSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM----------------- 236 (460)
Q Consensus 177 ~~---~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~----------------- 236 (460)
.. ....+|+.|+|||++.+..++.++||||+||++++|++|+.||.+.............
T Consensus 171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 250 (355)
T d2b1pa1 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_dssp ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence 33 4557899999999999888999999999999999999999998654322111100000
Q ss_pred -----------------cccccc--cCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhccccc
Q 012608 237 -----------------LTDSCL--EGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSPLQK 284 (460)
Q Consensus 237 -----------------~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~~~~ 284 (460)
...... ........++++.+|+.+||..||++|||++|+++ .++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~--Hpw~~ 315 (355)
T d2b1pa1 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ--HPYIN 315 (355)
T ss_dssp HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT--STTTG
T ss_pred HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc--CcccC
Confidence 000000 00011235778999999999999999999999998 44444
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.4e-40 Score=318.20 Aligned_cols=254 Identities=17% Similarity=0.204 Sum_probs=191.5
Q ss_pred ccchhcccCCCCCCeEEEEEE-cCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-----------CCccceeeeEEeeC
Q 012608 27 VENIVSEHGEKAPNVVYKGKL-ENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-----------NNRLTNLLGCCCEG 94 (460)
Q Consensus 27 ~~~i~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~~iv~~~~~~~~~ 94 (460)
+|+++++||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|+.+++.++ |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 499999999999999999995 5799999999975421 2457788999998885 57899999887643
Q ss_pred --CeeEEEEEcCCCC-CHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCcccccccCCcEEEcCCCC------e
Q 012608 95 --DERLLVAEYMPNE-TLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTS-KGRALYHDLNAYRILFDEDGN------P 164 (460)
Q Consensus 95 --~~~~lv~e~~~g~-sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~iiH~Dikp~Nill~~~~~------~ 164 (460)
...+++++++.++ .............+++..+..++.||+.||.|||+ .| |+||||||+|||++.++. +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~-IvHrDlKp~NIll~~~~~~~~~~~~ 171 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG-IIHTDIKPENVLMEIVDSPENLIQI 171 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC-EECSCCSGGGEEEEEEETTTTEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC-cccccCChhHeeeeccCccccccee
Confidence 4556666665543 33333444456788999999999999999999998 77 999999999999976543 8
Q ss_pred EEccCCCcccCCC-CCCccCCCcccCccccccCCCCCCCceehHHHHHHHHhhCCCCCCChhhhhh--------------
Q 012608 165 RLSTFGLMKNSRD-GKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLI-------------- 229 (460)
Q Consensus 165 kl~DFg~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDi~slG~~l~el~tg~~p~~~~~~~~~-------------- 229 (460)
+++|||.+..... .....||+.|+|||++.+..++.++||||+||++++|++|+.||........
T Consensus 172 kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~l 251 (362)
T d1q8ya_ 172 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 251 (362)
T ss_dssp EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred eEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHh
Confidence 9999999876543 3456789999999999988999999999999999999999998854321100
Q ss_pred --------hhc-----------ccccccc---------ccccCCCCchhHHHHHHHHHHHcccCCCCCCChhHHHHHhcc
Q 012608 230 --------RDR-----------NLQMLTD---------SCLEGQFTDDDGTELVRLASRCLQYEPRERPNPKSLVTALSP 281 (460)
Q Consensus 230 --------~~~-----------~~~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~L~~ 281 (460)
... ....... ...........++++.+|+.+||..||.+|||++|+++ .+
T Consensus 252 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~--Hp 329 (362)
T d1q8ya_ 252 GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN--HP 329 (362)
T ss_dssp CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT--CG
T ss_pred CCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc--Cc
Confidence 000 0000000 00112234567889999999999999999999999987 44
Q ss_pred ccc
Q 012608 282 LQK 284 (460)
Q Consensus 282 ~~~ 284 (460)
+.+
T Consensus 330 ~f~ 332 (362)
T d1q8ya_ 330 WLK 332 (362)
T ss_dssp GGT
T ss_pred ccC
Confidence 444
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.92 E-value=1.3e-25 Score=194.30 Aligned_cols=165 Identities=15% Similarity=0.113 Sum_probs=122.2
Q ss_pred cchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCC-------------C-----HHHHHHHHHHHhcCCCCccceeee
Q 012608 28 ENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWP-------------D-----PRQFLEEARSVGQLRNNRLTNLLG 89 (460)
Q Consensus 28 ~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~-----~~~~~~E~~~l~~l~h~~iv~~~~ 89 (460)
+.+.++||+|+||+||+|...+|+.||||+++..... . .....+|...+.++.|++++..++
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~ 81 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA 81 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence 4567899999999999999888999999987643211 0 123557889999999999999887
Q ss_pred EEeeCCeeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccccccCCcEEEcCCCCeEEccC
Q 012608 90 CCCEGDERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRILFDEDGNPRLSTF 169 (460)
Q Consensus 90 ~~~~~~~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~iiH~Dikp~Nill~~~~~~kl~DF 169 (460)
+.. .+++|||+++..+.+ ++......++.|++.+|.|||++| |+||||||+|||+++++ ++|+||
T Consensus 82 ~~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~g-iiHrDiKP~NILv~~~~-~~liDF 146 (191)
T d1zara2 82 WEG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHRG-IVHGDLSQYNVLVSEEG-IWIIDF 146 (191)
T ss_dssp EET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHTT-EECSCCSTTSEEEETTE-EEECCC
T ss_pred ecC----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhCC-EEEccCChhheeeeCCC-EEEEEC
Confidence 632 379999999765543 333445678999999999999999 99999999999999655 899999
Q ss_pred CCcccCCCCCCccCCCcccCcc-----ccccCCCCCCCceehHHHHH
Q 012608 170 GLMKNSRDGKSYSTNLAFTPPE-----YLRTGRVTPESVIYSFGTLL 211 (460)
Q Consensus 170 g~a~~~~~~~~~~~t~~y~aPE-----~~~~~~~~~~sDi~slG~~l 211 (460)
|++......... .|.... .+..+.++.++|+||+.--+
T Consensus 147 G~a~~~~~~~~~----~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 147 PQSVEVGEEGWR----EILERDVRNIITYFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp TTCEETTSTTHH----HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred CCcccCCCCCcH----HHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence 998765433211 111110 01235688899999976444
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=1.3e-20 Score=148.69 Aligned_cols=107 Identities=26% Similarity=0.368 Sum_probs=103.0
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
.+..++.+|+.++..|+|++|+..|+++|+.+|+ ++.+|.++|.+|..+|++++|+.+|+++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+|++++|+.+|++|++++|++..++
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 108 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNPQLK 108 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999998765
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.80 E-value=8.9e-20 Score=158.29 Aligned_cols=107 Identities=22% Similarity=0.351 Sum_probs=102.9
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..+.+.|+.+++.|+|++|+..|++||+++|+ ++.+|+++|.||.++|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 3677899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
|..+|++++|+.+|++|++++|++...+
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~~~~ 109 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQRLNF 109 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccHHHH
Confidence 9999999999999999999999877654
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=2.9e-19 Score=149.09 Aligned_cols=109 Identities=24% Similarity=0.310 Sum_probs=104.9
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
++.+..+..+|+.+++.|+|++|+..|++|++++|+ +..+|.++|.||..+|++++|+.+|++|++++|+++.+|+++|
T Consensus 7 l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~g 85 (159)
T d1a17a_ 7 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 85 (159)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHHH
Confidence 467888999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.++..+|++++|+.+|+++++++|.+..++
T Consensus 86 ~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~ 115 (159)
T d1a17a_ 86 ASNMALGKFRAALRDYETVVKVKPHDKDAK 115 (159)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCCHHHH
Confidence 999999999999999999999999987654
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.77 E-value=1.4e-18 Score=143.77 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=103.9
Q ss_pred hhhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc---------------cHHHHhhHHHHHHhcCChHHHHHHH
Q 012608 345 TDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---------------SPTVYARRSLCYLMSDMPQDALNDA 409 (460)
Q Consensus 345 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~~~~~~~~~~~~~~~A~~~~ 409 (460)
.+.+..+..++..|+.+++.|+|++|+..|++||+..+.. ...+|+|+|.||.++|++++|+.+|
T Consensus 11 ~e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~ 90 (153)
T d2fbna1 11 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 90 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhh
Confidence 4567889999999999999999999999999999876641 1247889999999999999999999
Q ss_pred HHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 410 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 410 ~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++||+++|++.++|+++|.++..+|++++|+.+|++|++++|++..++
T Consensus 91 ~~al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~ 138 (153)
T d2fbna1 91 SKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIR 138 (153)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred hccccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999988764
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=2.6e-18 Score=144.77 Aligned_cols=116 Identities=13% Similarity=0.103 Sum_probs=106.0
Q ss_pred hhhhhhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc--------------cHHHHhhHHHHHHhcCChHHHHH
Q 012608 342 QMWTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALN 407 (460)
Q Consensus 342 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~ 407 (460)
..+.++++.+..+++.|+.+++.|+|++|+..|++||+..|.. ...+|.++|.||+++|++++|+.
T Consensus 4 ~~~~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~ 83 (170)
T d1p5qa1 4 MNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIE 83 (170)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccc
Confidence 3455677889999999999999999999999999999988762 12568899999999999999999
Q ss_pred HHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 408 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 408 ~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++++||+++|+++.+|+++|.++..+|+|++|+.+|++|++++|++..+.
T Consensus 84 ~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~ 133 (170)
T d1p5qa1 84 SCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAK 133 (170)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred hhhhhhhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 99999999999999999999999999999999999999999999987653
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.73 E-value=5.6e-18 Score=142.44 Aligned_cols=114 Identities=15% Similarity=0.164 Sum_probs=103.5
Q ss_pred hhhhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc--------------cHHHHhhHHHHHHhcCChHHHHHHH
Q 012608 344 WTDQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV--------------SPTVYARRSLCYLMSDMPQDALNDA 409 (460)
Q Consensus 344 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~ 409 (460)
-.+.+..+..+.++|+.+++.|+|++|+..|++||...|.. ...+|.|+|.||.++|++.+|+.+|
T Consensus 8 ~~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~ 87 (168)
T d1kt1a1 8 TKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC 87 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhh
Confidence 44567889999999999999999999999999999754431 2356889999999999999999999
Q ss_pred HHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 410 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 410 ~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+++++++|++..+|+++|.++..+|+|++|+.+|++|++++|++..++
T Consensus 88 ~~al~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~ 135 (168)
T d1kt1a1 88 DKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAAR 135 (168)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hhhhhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999997664
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.71 E-value=1.8e-17 Score=139.56 Aligned_cols=111 Identities=18% Similarity=0.226 Sum_probs=101.2
Q ss_pred hhHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc----------------CCCccHHHHhhHHHHHHhcCChHHHHHHH
Q 012608 346 DQMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA----------------GTMVSPTVYARRSLCYLMSDMPQDALNDA 409 (460)
Q Consensus 346 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 409 (460)
.....+..+...|+.++..|+|++|++.|++||+. +|. ...++.++|.||.++|++++|+.+|
T Consensus 22 ~~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~~ 100 (169)
T d1ihga1 22 KILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSC 100 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhhh
Confidence 34455777889999999999999999999999853 455 6778999999999999999999999
Q ss_pred HHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 410 MQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 410 ~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++||+++|+++.+|+++|.+|..+|++++|+++|++|++++|++..+.
T Consensus 101 ~~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~ 148 (169)
T d1ihga1 101 LEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQ 148 (169)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999987654
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.71 E-value=1.8e-17 Score=132.48 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=96.5
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcch-------H
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWH-------I 421 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~-------~ 421 (460)
+.+..++++|+.++..|+|++|+.+|+++|+++|+ +..++.++|.||..+|+|++|+.+|++||+++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 45788999999999999999999999999999999 899999999999999999999999999999999875 4
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 422 ASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 422 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
+|+++|.++..++++++|+++|++++.+++..
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 112 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP 112 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCH
Confidence 67778889999999999999999999887653
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=1.4e-16 Score=143.48 Aligned_cols=108 Identities=13% Similarity=-0.011 Sum_probs=103.5
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
.+.+..++.+|..+++.|+|++|++.|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|
T Consensus 34 ~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 112 (259)
T d1xnfa_ 34 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 112 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHH
Confidence 357889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a 456 (460)
.++..+|++++|++.|+++++++|++..+
T Consensus 113 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 141 (259)
T d1xnfa_ 113 IALYYGGRDKLAQDDLLAFYQDDPNDPFR 141 (259)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHhhccccHHH
Confidence 99999999999999999999999987543
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.67 E-value=7.6e-17 Score=125.51 Aligned_cols=97 Identities=12% Similarity=0.053 Sum_probs=92.9
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
....+++.|..+++.|++++|+..|+++++.+|+ ++.+|.++|.++.+.|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 15 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~ 93 (112)
T d1hxia_ 15 YHENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 93 (112)
T ss_dssp GCSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHH
Confidence 3445688999999999999999999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhh
Q 012608 430 LSAMGMENEAQVALKEGT 447 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al 447 (460)
|..+|++++|+++|++.|
T Consensus 94 y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 94 HTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHh
Confidence 999999999999999986
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=7.8e-16 Score=132.00 Aligned_cols=101 Identities=14% Similarity=0.088 Sum_probs=93.1
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
++..++++|..++..|+|++|++.|+++ .|. ++.+|+++|.+|..+|++++|+++|++||+++|+++.+|+++|.+
T Consensus 4 ~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~~ 79 (192)
T d1hh8a_ 4 EAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGML 79 (192)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 4567789999999999999999999974 455 577899999999999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 430 LSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 430 ~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
+..+|+|++|+++|++|++..+.+.
T Consensus 80 ~~~~g~~~~A~~~~~kAl~~~~~n~ 104 (192)
T d1hh8a_ 80 YYQTEKYDLAIKDLKEALIQLRGNQ 104 (192)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHhhccHHHHHHHHHHHHHhCccCc
Confidence 9999999999999999999877654
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=2e-16 Score=124.57 Aligned_cols=101 Identities=10% Similarity=-0.026 Sum_probs=92.2
Q ss_pred HhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcC---ChHHHHHHHHHhhhhCCcc--hHHHHHHHHHH
Q 012608 356 KKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD---MPQDALNDAMQAQIISPIW--HIASYLQAAAL 430 (460)
Q Consensus 356 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~l~p~~--~~a~~~~g~~~ 430 (460)
++++.+...++|++|.+.|++++.++|+ ++.+++|+|.|+++.+ ++++|+..|+++++.+|+. +.+|+++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 5677888999999999999999999999 9999999999998744 5567999999999999765 56999999999
Q ss_pred HhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 431 SAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
..+|+|++|+++|++||+++|++..|.
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~~A~ 109 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNNQAK 109 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCHHHH
Confidence 999999999999999999999998775
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.60 E-value=1.9e-15 Score=125.07 Aligned_cols=111 Identities=14% Similarity=0.107 Sum_probs=97.2
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----------cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhC
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----------SPTVYARRSLCYLMSDMPQDALNDAMQAQIIS 416 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 416 (460)
+..+..+...|..+++.|+|++|+..|++||+++|+. ...+|.++|.+|..+|++++|+.++++++++.
T Consensus 6 ~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~ 85 (156)
T d2hr2a1 6 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 85 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcc
Confidence 3456667777999999999999999999999988762 13679999999999999999999999999886
Q ss_pred Cc-----------chHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 417 PI-----------WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 417 p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
|. +..+|+++|.+|..+|++++|+++|++|+++.|+......
T Consensus 86 ~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~~~~~ 138 (156)
T d2hr2a1 86 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 138 (156)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred cccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhhchHH
Confidence 53 4568999999999999999999999999999998876543
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=4.9e-15 Score=126.90 Aligned_cols=105 Identities=16% Similarity=0.105 Sum_probs=96.7
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc----------
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---------- 419 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---------- 419 (460)
++..|+++|.+++..|+|++|++.|++||+++|+ .+.+|+++|.+|.++|++++|+.+|++|++..|.+
T Consensus 35 ~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~ 113 (192)
T d1hh8a_ 35 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 113 (192)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhh
Confidence 3567999999999999999999999999999999 89999999999999999999999999999876543
Q ss_pred ------hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccc
Q 012608 420 ------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNS 455 (460)
Q Consensus 420 ------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 455 (460)
.++++++|.++..+|++++|++.|++|++++|+...
T Consensus 114 ~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~~~ 155 (192)
T d1hh8a_ 114 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 155 (192)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred hcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcch
Confidence 478999999999999999999999999999887543
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.57 E-value=6.4e-16 Score=126.00 Aligned_cols=100 Identities=12% Similarity=0.042 Sum_probs=89.5
Q ss_pred hhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhc----------CChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 358 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMS----------DMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 358 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
+..+-+.+.|++|+..|++|++++|+ ++.+++++|.++..+ +.+++|+..|++|++++|+++.+|+++|
T Consensus 4 ~~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG 82 (145)
T d1zu2a1 4 ETEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIG 82 (145)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHH
Confidence 44566778899999999999999999 999999999999854 4557899999999999999999999999
Q ss_pred HHHHhcCC-----------hHHHHHHHHHhhhhhhhcccccC
Q 012608 428 AALSAMGM-----------ENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 428 ~~~~~~~~-----------~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
.+|..+|+ |++|+++|++|++++|++..++.
T Consensus 83 ~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~ 124 (145)
T d1zu2a1 83 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLK 124 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHH
Confidence 99988764 79999999999999999887653
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=7.4e-15 Score=136.22 Aligned_cols=111 Identities=10% Similarity=-0.008 Sum_probs=104.3
Q ss_pred hHHHHHHhHHhhhHHHhhC-CHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 347 QMQETLNSKKKGDVAFRQK-DLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
...+..+|..+|.++...| ++++|++.|+++++++|+ +..+|.++|.++..+|++++|+.++++|++++|++..+|++
T Consensus 73 nP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~ 151 (315)
T d2h6fa1 73 NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQH 151 (315)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHH
Confidence 4477889999999998876 699999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 426 QAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 426 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+|.++..+|++++|+++|++|+++||.+..||.
T Consensus 152 ~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~ 184 (315)
T d2h6fa1 152 RQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWN 184 (315)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHH
Confidence 999999999999999999999999999988774
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=1.1e-14 Score=135.26 Aligned_cols=107 Identities=13% Similarity=0.165 Sum_probs=99.3
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
+..+..+|..+...|++++|+..|++++..+|+ ++.+|.++|.+|..+|++++|+..|+++++++|+++.+|+++|.+|
T Consensus 172 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 250 (323)
T d1fcha_ 172 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 250 (323)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 567889999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 431 SAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
..+|++++|+..|++|++++|++..++.
T Consensus 251 ~~~g~~~~A~~~~~~al~l~p~~~~~~~ 278 (323)
T d1fcha_ 251 INLGAHREAVEHFLEALNMQRKSRGPRG 278 (323)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC-----
T ss_pred HHCCCHHHHHHHHHHHHHhCCcChhhhh
Confidence 9999999999999999999999876543
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=7.5e-15 Score=136.19 Aligned_cols=109 Identities=10% Similarity=-0.067 Sum_probs=102.7
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCC-hHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-PQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
.-++++...|.++.+.+.+++|++.|++||+++|+ +..+|+++|.++..+++ +++|+..++++++++|++..+|+++|
T Consensus 41 ~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~~ 119 (315)
T d2h6fa1 41 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 119 (315)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHHh
Confidence 44667778899999999999999999999999999 89999999999999875 89999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
.++..+|++++|+++|++|++++|++..+|.
T Consensus 120 ~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~ 150 (315)
T d2h6fa1 120 VLVEWLRDPSQELEFIADILNQDAKNYHAWQ 150 (315)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHhhccHHHHHHHHhhhhhhhhcchHHHH
Confidence 9999999999999999999999999998874
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=3.1e-13 Score=125.27 Aligned_cols=106 Identities=9% Similarity=0.054 Sum_probs=100.1
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
....+++|..+++.|+|++|+..|+++++.+|+ ++.+|.++|.++..+|++++|+..|++|++++|+++.+|+++|.++
T Consensus 19 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 97 (323)
T d1fcha_ 19 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 97 (323)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccccccccc
Confidence 344578999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 431 SAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
..+|++++|++.|++++.++|+.....
T Consensus 98 ~~~~~~~~A~~~~~~~~~~~~~~~~~~ 124 (323)
T d1fcha_ 98 TNESLQRQACEILRDWLRYTPAYAHLV 124 (323)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred cccccccccccchhhHHHhccchHHHH
Confidence 999999999999999999999876544
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=2.4e-13 Score=128.18 Aligned_cols=109 Identities=13% Similarity=0.053 Sum_probs=103.6
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAA 428 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~ 428 (460)
.++..+..+|..+...|++++|++.|++++...|. ...++..++.++...|++++|+..|+++++++|+++.+|+++|.
T Consensus 269 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 347 (388)
T d1w3ba_ 269 HFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLAS 347 (388)
T ss_dssp SCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45678899999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
++..+|++++|+++|++|++++|++..++.
T Consensus 348 ~~~~~g~~~~A~~~~~~al~l~P~~~~a~~ 377 (388)
T d1w3ba_ 348 VLQQQGKLQEALMHYKEAIRISPTFADAYS 377 (388)
T ss_dssp HHHTTTCCHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 999999999999999999999999987763
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.8e-13 Score=102.43 Aligned_cols=84 Identities=15% Similarity=-0.026 Sum_probs=75.5
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc------cHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV------SPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 424 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~ 424 (460)
++..+++|..+++.|+|++|+..|++|+++.|.+ ...++.++|.++.++|++++|+..|++|++++|+++.+++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 5678999999999999999999999999886542 3578999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q 012608 425 LQAAALSAMG 434 (460)
Q Consensus 425 ~~g~~~~~~~ 434 (460)
|++.+...++
T Consensus 85 Nl~~~~~~l~ 94 (95)
T d1tjca_ 85 NLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9988766543
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=4.8e-13 Score=126.05 Aligned_cols=102 Identities=12% Similarity=-0.010 Sum_probs=96.9
Q ss_pred hHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhc
Q 012608 354 SKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAM 433 (460)
Q Consensus 354 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~ 433 (460)
+.++|..+++.|+|++|++.|+++++.+|+ ++.++..+|.+|..+|++++|+..|+++++++|+++.+|+++|.++..+
T Consensus 2 ll~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~ 80 (388)
T d1w3ba_ 2 PMELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER 80 (388)
T ss_dssp CCTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhh
Confidence 457899999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhhhhhhhcccc
Q 012608 434 GMENEAQVALKEGTTLEAKKNST 456 (460)
Q Consensus 434 ~~~~~A~~~~~~al~l~~~~~~a 456 (460)
|++++|+..|.++++.+|.....
T Consensus 81 g~~~~A~~~~~~~~~~~~~~~~~ 103 (388)
T d1w3ba_ 81 GQLQEAIEHYRHALRLKPDFIDG 103 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHH
T ss_pred ccccccccccccccccccccccc
Confidence 99999999999999998876543
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.28 E-value=6.3e-12 Score=104.87 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=85.5
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
...+..+.++|.++.+.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..++
T Consensus 74 ~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~ 152 (169)
T d1ihga1 74 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELL 152 (169)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356778899999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHH
Q 012608 428 AALSAMGMENEAQ 440 (460)
Q Consensus 428 ~~~~~~~~~~~A~ 440 (460)
.+...+..+.++.
T Consensus 153 ~~~~~l~~~~~~~ 165 (169)
T d1ihga1 153 KVKQKIKAQKDKE 165 (169)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9988877776654
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.28 E-value=2e-12 Score=115.60 Aligned_cols=96 Identities=17% Similarity=0.060 Sum_probs=85.6
Q ss_pred hhCCHHHHHHHHHHHhhcCCC---ccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHH
Q 012608 363 RQKDLKDAIECYTQFIDAGTM---VSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEA 439 (460)
Q Consensus 363 ~~~~~~~A~~~~~~al~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A 439 (460)
...+++.|+..+++++...+. ....+|+++|.+|..+|++++|+..|++|++++|+++.+|+++|.++..+|++++|
T Consensus 11 ~~~~~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A 90 (259)
T d1xnfa_ 11 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 90 (259)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHh
Confidence 445678888899999875332 25678999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhcccccC
Q 012608 440 QVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 440 ~~~~~~al~l~~~~~~a~~ 458 (460)
+++|++|++++|++..++.
T Consensus 91 ~~~~~~al~~~p~~~~a~~ 109 (259)
T d1xnfa_ 91 YEAFDSVLELDPTYNYAHL 109 (259)
T ss_dssp HHHHHHHHHHCTTCTHHHH
T ss_pred hhhhhHHHHHHhhhhhhHH
Confidence 9999999999999887653
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=1e-11 Score=96.68 Aligned_cols=83 Identities=8% Similarity=-0.068 Sum_probs=78.8
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..++..|..+|.++...|+|++|+..|+++++++|+ ++.+|+++|.++..+|++++|+.+|+++++++|+++.++..++
T Consensus 34 p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~ 112 (117)
T d1elwa_ 34 PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQ 112 (117)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred CcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 356889999999999999999999999999999999 8999999999999999999999999999999999999999998
Q ss_pred HHHH
Q 012608 428 AALS 431 (460)
Q Consensus 428 ~~~~ 431 (460)
.+..
T Consensus 113 ~l~~ 116 (117)
T d1elwa_ 113 NMEA 116 (117)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 8754
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.24 E-value=1.9e-11 Score=101.98 Aligned_cols=90 Identities=12% Similarity=0.029 Sum_probs=83.4
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
...+.++|.++++.|+|++|+..+++||+++|+ ++.+++++|.||..+|++++|+.+|++|++++|+++.+...++.++
T Consensus 62 ~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 140 (170)
T d1p5qa1 62 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 140 (170)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345678999999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHH
Q 012608 431 SAMGMENEAQV 441 (460)
Q Consensus 431 ~~~~~~~~A~~ 441 (460)
..+++..+..+
T Consensus 141 ~~~~~~~~~e~ 151 (170)
T d1p5qa1 141 QRIRRQLAREK 151 (170)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887776544
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.24 E-value=3.7e-11 Score=100.74 Aligned_cols=100 Identities=9% Similarity=-0.038 Sum_probs=90.9
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc---------------------cHHHHhhHHHHHHhcCChHHHHH
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---------------------SPTVYARRSLCYLMSDMPQDALN 407 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---------------------~~~~~~~~~~~~~~~~~~~~A~~ 407 (460)
..-..+.+.|..+...|++++|++.|++|+++++.+ ...++.+++.++..+|++++|+.
T Consensus 9 ~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al~ 88 (179)
T d2ff4a2 9 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIA 88 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHH
Confidence 456678899999999999999999999999998762 11457889999999999999999
Q ss_pred HHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhh
Q 012608 408 DAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTT 448 (460)
Q Consensus 408 ~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 448 (460)
+++++++++|.+..+|.+++.+|..+|++++|++.|+++.+
T Consensus 89 ~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~ 129 (179)
T d2ff4a2 89 ELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 129 (179)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999833
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.21 E-value=3.3e-11 Score=100.25 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=85.6
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
...+.++|.++++.|+|++|+..++++++++|+ +..+|+++|.+|..+|++++|+.+|+++++++|+++.++..++.+.
T Consensus 64 ~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 142 (168)
T d1kt1a1 64 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQ 142 (168)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 456778999999999999999999999999999 8999999999999999999999999999999999999999999998
Q ss_pred HhcCChHH-HHHHHHHhh
Q 012608 431 SAMGMENE-AQVALKEGT 447 (460)
Q Consensus 431 ~~~~~~~~-A~~~~~~al 447 (460)
..++++.+ ..+.|.+.+
T Consensus 143 ~~~~~~~e~~kk~~~~~f 160 (168)
T d1kt1a1 143 KKAKEHNERDRRTYANMF 160 (168)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHH
Confidence 88877655 444444443
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.18 E-value=5.6e-11 Score=97.86 Aligned_cols=96 Identities=14% Similarity=-0.013 Sum_probs=85.3
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
..++..|.++|.+++..|++++|+..|+++|+++|+ +..+|.++|.++..+|++++|+.+++++++++|+++.++..++
T Consensus 41 p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~ 119 (159)
T d1a17a_ 41 PSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQ 119 (159)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 357889999999999999999999999999999999 8999999999999999999999999999999999999998888
Q ss_pred HHHH--hcCChHHHHHHHH
Q 012608 428 AALS--AMGMENEAQVALK 444 (460)
Q Consensus 428 ~~~~--~~~~~~~A~~~~~ 444 (460)
.+.. ..+.+++|+....
T Consensus 120 ~~~~~~~~~~~~~a~~~~~ 138 (159)
T d1a17a_ 120 ECNKIVKQKAFERAIAGDE 138 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcH
Confidence 7654 4455666665433
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.18 E-value=2.6e-11 Score=99.13 Aligned_cols=83 Identities=8% Similarity=0.048 Sum_probs=77.6
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
...+.++|.++++.|+|++|++.|++||+++|+ +..+|+++|.+|..+|++++|+.+|+++++++|+++.+...++.+.
T Consensus 67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 145 (153)
T d2fbna1 67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 145 (153)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 346778999999999999999999999999999 8999999999999999999999999999999999999999998887
Q ss_pred HhcC
Q 012608 431 SAMG 434 (460)
Q Consensus 431 ~~~~ 434 (460)
.+++
T Consensus 146 ~kl~ 149 (153)
T d2fbna1 146 NKLK 149 (153)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.17 E-value=1.9e-11 Score=94.19 Aligned_cols=72 Identities=14% Similarity=-0.025 Sum_probs=68.0
Q ss_pred HHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 387 TVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
..+++.|.++.+.|++++|+..|+++++++|+++.+|+++|.++..+|++++|+.+|++|++++|++..+|.
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 88 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHA 88 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccchH
Confidence 446788999999999999999999999999999999999999999999999999999999999999988763
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=4.4e-11 Score=94.54 Aligned_cols=72 Identities=13% Similarity=-0.051 Sum_probs=67.9
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 386 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
+..+.+.|.+++..|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+++|++|++++|++..++
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~ 75 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDY 75 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHH
Confidence 455778999999999999999999999999999999999999999999999999999999999999987765
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=5.6e-11 Score=88.49 Aligned_cols=73 Identities=11% Similarity=-0.158 Sum_probs=65.8
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc-------hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 386 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW-------HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
+.-.+++|.+++..|+|.+|+..|++|+++.|.+ +++++++|.++..+|++++|++.|++||+++|++..|+.
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 3446789999999999999999999999997654 788999999999999999999999999999999987753
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.10 E-value=7.3e-11 Score=100.88 Aligned_cols=73 Identities=10% Similarity=-0.009 Sum_probs=69.0
Q ss_pred HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 386 PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
...+...|..+++.|+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++..+|.
T Consensus 4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~ 76 (201)
T d2c2la1 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 76 (201)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHH
Confidence 5567788999999999999999999999999999999999999999999999999999999999999987763
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.00 E-value=1.8e-10 Score=93.00 Aligned_cols=91 Identities=14% Similarity=-0.035 Sum_probs=78.4
Q ss_pred HHHHHHhHHhhhHHHh----------hCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCC-----------hHHHH
Q 012608 348 MQETLNSKKKGDVAFR----------QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM-----------PQDAL 406 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~----------~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-----------~~~A~ 406 (460)
..++..+.+.|.++.. .+.+++|+..|++||+++|+ ++.+|+++|.+|..+|+ |++|+
T Consensus 28 P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~ 106 (145)
T d1zu2a1 28 PLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLAT 106 (145)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHhHHHhh
Confidence 4678889999999874 45668999999999999999 89999999999988754 68999
Q ss_pred HHHHHhhhhCCcchHHHHHHHHHHHhcCChHHH
Q 012608 407 NDAMQAQIISPIWHIASYLQAAALSAMGMENEA 439 (460)
Q Consensus 407 ~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A 439 (460)
+.|++|++++|++..++..++.+....+.+.++
T Consensus 107 ~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~ 139 (145)
T d1zu2a1 107 QFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 139 (145)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhhcccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999887665555554
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=1.7e-10 Score=90.01 Aligned_cols=85 Identities=13% Similarity=0.015 Sum_probs=74.7
Q ss_pred HHHHHhHHhhhHHHh---hCCHHHHHHHHHHHhhcCCCcc-HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHH
Q 012608 349 QETLNSKKKGDVAFR---QKDLKDAIECYTQFIDAGTMVS-PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASY 424 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~---~~~~~~A~~~~~~al~~~p~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~ 424 (460)
.++..+++.|.++++ .+++++|+..|+++++.+|.+. ..+++++|.+|..+|++++|+..|+++++++|++..|..
T Consensus 31 ~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~~ 110 (122)
T d1nzna_ 31 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 110 (122)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHHH
Confidence 467889999999986 4566789999999999998722 458999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 012608 425 LQAAALSAM 433 (460)
Q Consensus 425 ~~g~~~~~~ 433 (460)
.++.+..++
T Consensus 111 l~~~I~~~~ 119 (122)
T d1nzna_ 111 LERLIDKAM 119 (122)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998877654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=1.3e-10 Score=114.00 Aligned_cols=107 Identities=8% Similarity=-0.069 Sum_probs=72.8
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
...+..+.+.|..+.+.|++++|+..|.+++..+|. .++.++|.++...+++++|+..|++|++++|++..+|+++|
T Consensus 117 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg 193 (497)
T d1ya0a1 117 LPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLA 193 (497)
T ss_dssp --------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHH
T ss_pred hhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 356777889999999999999999999999988765 56778899999999999999999999999999999999999
Q ss_pred HHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 428 AALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 428 ~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
.++...|++.+|+.+|.+|+.++|....|+
T Consensus 194 ~~~~~~~~~~~A~~~y~ral~~~~~~~~a~ 223 (497)
T d1ya0a1 194 ILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223 (497)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSSBCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCCCHHHH
Confidence 999999999999999999999988876664
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.96 E-value=9.7e-10 Score=101.86 Aligned_cols=105 Identities=10% Similarity=-0.106 Sum_probs=58.8
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCC--hHHHHHHHHHhhhhCCcchHHH-HHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDM--PQDALNDAMQAQIISPIWHIAS-YLQAA 428 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~--~~~A~~~~~~a~~l~p~~~~a~-~~~g~ 428 (460)
..+...+..+...|++++|+..|+++++.+|+ +..+|+++|.++...++ +++|+..++++++++|.+..++ +..|.
T Consensus 74 ~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~ 152 (334)
T d1dcea1 74 QHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFV 152 (334)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHH
Confidence 34444455555555556666666666666665 55555555555555443 4556666666666666555554 24455
Q ss_pred HHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 429 ALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 429 ~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
++...+++++|+..++++++++|.+..+|
T Consensus 153 ~~~~~~~~~~Al~~~~~~i~~~p~~~~a~ 181 (334)
T d1dcea1 153 AAQAAVAPAEELAFTDSLITRNFSNYSSW 181 (334)
T ss_dssp HHHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred HHHhccccHHHHHHHHHHHHcCCCCHHHH
Confidence 55555666666666666666666555544
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.91 E-value=1.5e-09 Score=98.52 Aligned_cols=105 Identities=11% Similarity=0.025 Sum_probs=91.5
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcC-----CCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc----
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAG-----TMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---- 419 (460)
+.+..|.+.|+.+...|+|++|+++|.+|+++. +......|.++|.||..+|++++|++.+++++++.++.
T Consensus 35 ~Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~ 114 (290)
T d1qqea_ 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFR 114 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccch
Confidence 456778899999999999999999999999873 22245789999999999999999999999999998766
Q ss_pred --hHHHHHHHHHHHh-cCChHHHHHHHHHhhhhhhhc
Q 012608 420 --HIASYLQAAALSA-MGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 420 --~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~~~~ 453 (460)
..++.++|.++.. +|++++|++.|++|+++.+..
T Consensus 115 ~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~ 151 (290)
T d1qqea_ 115 RGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD 151 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 7788999998865 699999999999999987654
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.86 E-value=5.1e-09 Score=93.03 Aligned_cols=100 Identities=13% Similarity=0.004 Sum_probs=78.2
Q ss_pred hhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHH------------
Q 012608 358 GDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYL------------ 425 (460)
Q Consensus 358 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~------------ 425 (460)
+..+++.|++++|+..|+++|+.+|+ +..++.+++.+|...|++++|+..|+++++++|++..++..
T Consensus 3 ~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~~ 81 (264)
T d1zbpa1 3 WKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARK 81 (264)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhccccH
Confidence 45567788888888888888888888 78888888888888888888888888888888876555544
Q ss_pred -----------------------HHHHHHhcCChHHHHHHHHHhhhhhhhcccccC
Q 012608 426 -----------------------QAAALSAMGMENEAQVALKEGTTLEAKKNSTAG 458 (460)
Q Consensus 426 -----------------------~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~~ 458 (460)
.+.++...|++++|.+.++++.++.|.....|.
T Consensus 82 ~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~~ 137 (264)
T d1zbpa1 82 DFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLAN 137 (264)
T ss_dssp HHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEET
T ss_pred HHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCcccc
Confidence 444556667888888888888888888765543
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.86 E-value=5.7e-09 Score=96.50 Aligned_cols=95 Identities=9% Similarity=-0.060 Sum_probs=82.7
Q ss_pred HhhCC-HHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcC----------ChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 362 FRQKD-LKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSD----------MPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 362 ~~~~~-~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~----------~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
...++ +++|++.++++|+++|+ +..+|+.++.++..++ ++.+|+..++++++.+|+++.+|+++|.++
T Consensus 39 ~~~~~~~~~al~~~~~~l~~~P~-~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~~~~~~~~~~ 117 (334)
T d1dcea1 39 RQAGELDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLL 117 (334)
T ss_dssp HHTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HhcccccHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHhhHHH
Confidence 34444 58999999999999999 8888888777666544 478999999999999999999999999999
Q ss_pred HhcCC--hHHHHHHHHHhhhhhhhccccc
Q 012608 431 SAMGM--ENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 431 ~~~~~--~~~A~~~~~~al~l~~~~~~a~ 457 (460)
..+++ +++|+..++++++++|++..+|
T Consensus 118 ~~~~~~~~~~a~~~~~~al~~~~~~~~~~ 146 (334)
T d1dcea1 118 SRLPEPNWARELELCARFLEADERNFHCW 146 (334)
T ss_dssp HTCSSCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHhccccHHHHHHHHHHHHhhCchhhhhh
Confidence 88875 8999999999999999987765
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.82 E-value=1.1e-08 Score=91.16 Aligned_cols=145 Identities=12% Similarity=0.043 Sum_probs=98.4
Q ss_pred HHHHHhcCCcccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CCccceeeeEEeeCC
Q 012608 17 QLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGD 95 (460)
Q Consensus 17 ~~~~~~~~f~~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 95 (460)
||.+-..++ ++++..+.++.+.||+... +++.++||+...........+.+|+..++.+. +-.+++++.+...++
T Consensus 8 ~l~~~~~~~---~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~ 83 (263)
T d1j7la_ 8 ELKKLIEKY---RCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG 83 (263)
T ss_dssp HHHHHHTTS---EEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT
T ss_pred HHHHhhhce---EEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCC
Confidence 444444444 4555545555678998875 55667888876655445567888999988883 545788898888889
Q ss_pred eeEEEEEcCCCCCHHhhhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------
Q 012608 96 ERLLVAEYMPNETLAKHLFHWETHPMKWAMRLRVVLHLAQALEYCTSK-------------------------------- 143 (460)
Q Consensus 96 ~~~lv~e~~~g~sL~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-------------------------------- 143 (460)
..++||++++|.++.+.... ... ...+..++...+..||+.
T Consensus 84 ~~~lv~~~l~G~~~~~~~~~----~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T d1j7la_ 84 WSNLLMSEADGVLCSEEYED----EQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEEECCSSEEHHHHTTT----CSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGG
T ss_pred ceEEEEEecccccccccccc----ccc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhh
Confidence 99999999999888665421 011 112233333334444421
Q ss_pred ---------------------------CCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 144 ---------------------------GRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 144 ---------------------------~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
. ++|+|+.|.|||+++++.+-|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~-l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 157 NWEEDTPFKDPRELYDFLKTEKPEEELV-FSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSCSSHHHHHHHHHHSCCCCCEE-EECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccchHHHHHHHHHHhcCCcCCcE-EEEeeccCcceeecCCceEEEeechhcc
Confidence 1 5899999999999987666799999764
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.78 E-value=7.1e-09 Score=93.92 Aligned_cols=106 Identities=8% Similarity=-0.184 Sum_probs=91.3
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc-----cHHHHhhHHHHHHh-cCChHHHHHHHHHhhhhCCc----
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV-----SPTVYARRSLCYLM-SDMPQDALNDAMQAQIISPI---- 418 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~l~p~---- 418 (460)
..+..+.+.|.++.+.|++++|+++|++++++.+.. ...++.++|.+|.. .|++++|++.|++|+++.+.
T Consensus 75 ~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~ 154 (290)
T d1qqea_ 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 457789999999999999999999999999886552 25678888888755 69999999999999988543
Q ss_pred --chHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 419 --WHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 419 --~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
...++.++|.++..+|+|++|+..|++++.+.+...
T Consensus 155 ~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~ 192 (290)
T d1qqea_ 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred hhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccch
Confidence 366789999999999999999999999999987764
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=7.2e-08 Score=88.51 Aligned_cols=107 Identities=10% Similarity=-0.051 Sum_probs=93.0
Q ss_pred HHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCcc----HHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcc----
Q 012608 348 MQETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVS----PTVYARRSLCYLMSDMPQDALNDAMQAQIISPIW---- 419 (460)
Q Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~---- 419 (460)
...++...-+|..++..|++++|+..|+++++..|++. ..++..+|.+|...|++++|+..|++++++.|..
T Consensus 9 ~~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 88 (366)
T d1hz4a_ 9 TMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWH 88 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred chhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchH
Confidence 34566677789999999999999999999999999843 3578889999999999999999999999886543
Q ss_pred --hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhcc
Q 012608 420 --HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 420 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 454 (460)
..+++++|.++...|++..|...+.+++.+.+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~ 125 (366)
T d1hz4a_ 89 YALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQH 125 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcc
Confidence 56788999999999999999999999999877543
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.60 E-value=6.9e-08 Score=94.22 Aligned_cols=85 Identities=13% Similarity=-0.037 Sum_probs=79.6
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAA 429 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~ 429 (460)
....+..+|..+...|+|++|+.+|.+|++++|+ +...|+++|.++...|++.+|+..|.+|+.++|.++.|+.+++.+
T Consensus 151 ~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~ 229 (497)
T d1ya0a1 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999998
Q ss_pred HHhcCC
Q 012608 430 LSAMGM 435 (460)
Q Consensus 430 ~~~~~~ 435 (460)
+....+
T Consensus 230 ~~~~~~ 235 (497)
T d1ya0a1 230 LSKALE 235 (497)
T ss_dssp HHHHTT
T ss_pred HHHhhh
Confidence 876543
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=1.8e-07 Score=85.77 Aligned_cols=105 Identities=10% Similarity=-0.083 Sum_probs=92.0
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCc---cHHHHhhHHHHHHhcCChHHHHHHHHHhh------hhCCcc
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMV---SPTVYARRSLCYLMSDMPQDALNDAMQAQ------IISPIW 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~a~------~l~p~~ 419 (460)
..+..+...|..+...|++++|...+.++++..|.+ ....+.++|.++...|++++|+..+++++ ...|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 290 (366)
T d1hz4a_ 211 WISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDL 290 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHH
Confidence 456677888999999999999999999999987763 23457778999999999999999999998 445778
Q ss_pred hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhc
Q 012608 420 HIASYLQAAALSAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 420 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
+.++..+|.+|..+|++++|++.|++|+++.+..
T Consensus 291 ~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~~ 324 (366)
T d1hz4a_ 291 NRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRT 324 (366)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhhc
Confidence 8999999999999999999999999999997654
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.47 E-value=2.8e-07 Score=69.85 Aligned_cols=72 Identities=7% Similarity=-0.103 Sum_probs=41.8
Q ss_pred HHHHhhHHHHHHhcCC---hHHHHHHHHHhhhhCCcc-hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 386 PTVYARRSLCYLMSDM---PQDALNDAMQAQIISPIW-HIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 386 ~~~~~~~~~~~~~~~~---~~~A~~~~~~a~~l~p~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
....++.|.|+.+..+ .++||..++++++.+|.. .+++|++|.+|+.+|+|++|.++++++|+++|++..|.
T Consensus 35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~ 110 (124)
T d2pqrb1 35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 110 (124)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHH
Confidence 3445555555554322 345666666666666644 35666666666666666666666666666666665543
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.46 E-value=1.6e-07 Score=76.21 Aligned_cols=69 Identities=16% Similarity=0.077 Sum_probs=59.8
Q ss_pred HHHhhH--HHHHHhcCChHHHHHHHHHhhhhCCcc------------hHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhh
Q 012608 387 TVYARR--SLCYLMSDMPQDALNDAMQAQIISPIW------------HIASYLQAAALSAMGMENEAQVALKEGTTLEAK 452 (460)
Q Consensus 387 ~~~~~~--~~~~~~~~~~~~A~~~~~~a~~l~p~~------------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 452 (460)
.+|.++ |..++..|+|++|+..|++||+++|+. +.+|.++|.+|..+|+|++|+.++++|+++.|+
T Consensus 8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~ 87 (156)
T d2hr2a1 8 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 87 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccc
Confidence 344444 778888999999999999999999875 468999999999999999999999999999887
Q ss_pred ccc
Q 012608 453 KNS 455 (460)
Q Consensus 453 ~~~ 455 (460)
...
T Consensus 88 ~~~ 90 (156)
T d2hr2a1 88 RGE 90 (156)
T ss_dssp HCC
T ss_pred ccc
Confidence 544
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.39 E-value=8.2e-07 Score=78.14 Aligned_cols=70 Identities=17% Similarity=0.168 Sum_probs=53.5
Q ss_pred CCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCC--CCccceeeeEEeeCCeeEEEEEcCCCCCHHh
Q 012608 39 PNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLR--NNRLTNLLGCCCEGDERLLVAEYMPNETLAK 111 (460)
Q Consensus 39 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~g~sL~~ 111 (460)
.+.||+....++..+++|...... ...+..|+..++.+. .-.+++++.+...++..++||++++|.++.+
T Consensus 24 ~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 24 DAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp SCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred CCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc
Confidence 367999998788889999865543 335778888888773 3346788888888888999999999876643
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.32 E-value=9.1e-07 Score=66.98 Aligned_cols=82 Identities=5% Similarity=-0.170 Sum_probs=68.2
Q ss_pred HHHhHHhhhHHHhh---CCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQ---KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQA 427 (460)
Q Consensus 351 ~~~~~~~g~~~~~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g 427 (460)
+..-++-|..+.+. .+.++||..++++++.+|.+....++++|.+|.++|+|+.|+..++++++++|++..|...+-
T Consensus 35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~ 114 (124)
T d2pqrb1 35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 114 (124)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHH
Confidence 34556677777644 566799999999999999844589999999999999999999999999999999999987766
Q ss_pred HHHHh
Q 012608 428 AALSA 432 (460)
Q Consensus 428 ~~~~~ 432 (460)
.+...
T Consensus 115 ~Ie~~ 119 (124)
T d2pqrb1 115 MVEDK 119 (124)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.26 E-value=2.3e-06 Score=77.51 Aligned_cols=101 Identities=14% Similarity=-0.017 Sum_probs=84.7
Q ss_pred HHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHH-HhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 352 LNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCY-LMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
..|...+....+.|+++.|.+.|.+|++..|. ....|...+... ...|+.+.|...|+++++.+|+++..|...+..+
T Consensus 135 ~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~ 213 (308)
T d2onda1 135 LVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 213 (308)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 34667777788889999999999999999998 777777777654 3468888899999999999999999999999999
Q ss_pred HhcCChHHHHHHHHHhhhhhhhc
Q 012608 431 SAMGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 431 ~~~~~~~~A~~~~~~al~l~~~~ 453 (460)
...|+++.|...|++|++..|.+
T Consensus 214 ~~~g~~~~aR~~fe~ai~~~~~~ 236 (308)
T d2onda1 214 SHLNEDNNTRVLFERVLTSGSLP 236 (308)
T ss_dssp HTTCCHHHHHHHHHHHHHSSSSC
T ss_pred HHcCChHHHHHHHHHHHHhCCCC
Confidence 99999999999999999866543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.25 E-value=2.8e-06 Score=76.90 Aligned_cols=107 Identities=9% Similarity=-0.080 Sum_probs=94.7
Q ss_pred HHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHH
Q 012608 351 TLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAAL 430 (460)
Q Consensus 351 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~ 430 (460)
...|...+....+.|++++|...|+++++..|.+...+|...+....+.++++.|.+.|++|++..|.....|...|...
T Consensus 99 ~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e 178 (308)
T d2onda1 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 178 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 34567778888899999999999999999999844567888889999999999999999999999999999999998865
Q ss_pred -HhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 431 -SAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 431 -~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
...|+.+.|...|+++++.+|++...|
T Consensus 179 ~~~~~~~~~a~~i~e~~l~~~p~~~~~w 206 (308)
T d2onda1 179 YYCSKDKSVAFKIFELGLKKYGDIPEYV 206 (308)
T ss_dssp HHTSCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhccCHHHHHHHHHHHHHhhhhhHHHH
Confidence 456899999999999999999987665
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.20 E-value=8.3e-07 Score=78.35 Aligned_cols=63 Identities=21% Similarity=-0.008 Sum_probs=59.1
Q ss_pred HHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHhcCChHHHHHHHHHhhhhhhhccccc
Q 012608 395 CYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSAMGMENEAQVALKEGTTLEAKKNSTA 457 (460)
Q Consensus 395 ~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~a~ 457 (460)
-.++.|++++|+..++++++.+|+++.++..+|.+|...|++++|++.|+++++++|+...++
T Consensus 5 ~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~ 67 (264)
T d1zbpa1 5 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 67 (264)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 456789999999999999999999999999999999999999999999999999999987654
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=98.14 E-value=7.6e-06 Score=76.63 Aligned_cols=94 Identities=12% Similarity=0.058 Sum_probs=57.5
Q ss_pred cCHHHHHHHhcCCcccch--hcccCCCCCCeEEEEEEc-CCcEEEEEEecC------CC-CCCHHHHHHHHHHHhcC-CC
Q 012608 13 FTLEQLKNATSGFAVENI--VSEHGEKAPNVVYKGKLE-NQRRIAVKRFNR------MA-WPDPRQFLEEARSVGQL-RN 81 (460)
Q Consensus 13 ~~~~~~~~~~~~f~~~~i--~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~------~~-~~~~~~~~~E~~~l~~l-~h 81 (460)
=+..++....+-|..... .+.+|.|....||+.+.. +|+.|+||.-.. .. .....+...|.+.|+.+ .+
T Consensus 11 ~~~~~la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~ 90 (392)
T d2pula1 11 SSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEH 90 (392)
T ss_dssp HHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 334445555565655442 457899999999999854 478899996432 11 12345567788888877 33
Q ss_pred --CccceeeeEEeeCCeeEEEEEcCCCCC
Q 012608 82 --NRLTNLLGCCCEGDERLLVAEYMPNET 108 (460)
Q Consensus 82 --~~iv~~~~~~~~~~~~~lv~e~~~g~s 108 (460)
..+++++.+ +++..++|||++++.+
T Consensus 91 ~p~~vP~v~~~--d~~~~~lvmE~L~~~~ 117 (392)
T d2pula1 91 VPHLVPRVFYS--DTEMAVTVMEDLSHLK 117 (392)
T ss_dssp CGGGSCCEEEE--ETTTTEEEECCCTTSE
T ss_pred CCCCcceEEEE--cCCCCEEEEeccCCcc
Confidence 346666655 3455689999998654
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.03 E-value=1.7e-05 Score=69.64 Aligned_cols=99 Identities=12% Similarity=0.084 Sum_probs=85.0
Q ss_pred HHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCCcchHHHHH
Q 012608 350 ETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYL 425 (460)
Q Consensus 350 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~~~ 425 (460)
++.+++++|..++..|||++|+++|++|.+.+ +..+++++|.+|.. ..++..|...+.++...+ ++.+.++
T Consensus 1 ~p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~g---~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--~~~a~~~ 75 (265)
T d1ouva_ 1 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHL 75 (265)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--ccchhhc
Confidence 46789999999999999999999999998864 56788999999997 678999999999987654 8899999
Q ss_pred HHHHHHh----cCChHHHHHHHHHhhhhhhhc
Q 012608 426 QAAALSA----MGMENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 426 ~g~~~~~----~~~~~~A~~~~~~al~l~~~~ 453 (460)
+|..+.. ..+.+.|...|+++.+.++..
T Consensus 76 l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~~ 107 (265)
T d1ouva_ 76 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAE 107 (265)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred cccccccccccchhhHHHHHHHhhhhhhhhhh
Confidence 9988875 468899999999998776543
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.00 E-value=8.2e-06 Score=67.30 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=63.6
Q ss_pred HHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHh-------hhhCCcc
Q 012608 349 QETLNSKKKGDVAFRQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQA-------QIISPIW 419 (460)
Q Consensus 349 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-------~~l~p~~ 419 (460)
.....+.++|..+...|+|++|+..++++++++|. +..+|.+++.++..+|++.+|++.|+++ +.++|..
T Consensus 65 ~~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 65 DKVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 34667889999999999999999999999999999 8999999999999999999999999998 4566753
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=3.5e-05 Score=70.01 Aligned_cols=98 Identities=20% Similarity=0.234 Sum_probs=62.4
Q ss_pred CccccCHHHHHHHhcCCc--ccchhcccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCcc--
Q 012608 9 SFREFTLEQLKNATSGFA--VENIVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNRL-- 84 (460)
Q Consensus 9 ~~~~~~~~~~~~~~~~f~--~~~i~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-- 84 (460)
++..+|.+.+..+..++. ...-+..|+ +--..||+++..+|..+++|+...... +.+++..|...+..|...+|
T Consensus 4 ~f~~L~pd~i~~al~~~g~~~~~~~~~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv 81 (325)
T d1zyla1 4 TFQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPV 81 (325)
T ss_dssp CCCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSB
T ss_pred CccccCHHHHHHHHHHcCCCCCcCccccc-cccceeEEEEcCCCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCC
Confidence 566777777766664442 221122233 223689999998999999999765533 46788899999888842222
Q ss_pred ceee-----eEEeeCCeeEEEEEcCCCCC
Q 012608 85 TNLL-----GCCCEGDERLLVAEYMPNET 108 (460)
Q Consensus 85 v~~~-----~~~~~~~~~~lv~e~~~g~s 108 (460)
+..+ ..+..++..+.++++++|.+
T Consensus 82 ~~p~~~~g~~~~~~~~~~~~l~~~~~G~~ 110 (325)
T d1zyla1 82 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQ 110 (325)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred CCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence 2111 12234567889999998643
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.72 E-value=0.00013 Score=56.52 Aligned_cols=86 Identities=10% Similarity=-0.037 Sum_probs=73.3
Q ss_pred hhCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHh----cC
Q 012608 363 RQKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MG 434 (460)
Q Consensus 363 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~----~~ 434 (460)
...++++|+..|.++.+.+ ++.+.+++|..|.. ..++..|++.|+++.+. .++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~g---~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACELN---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhccc---chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 4578999999999998864 56788889998886 46789999999999886 588999999999887 56
Q ss_pred ChHHHHHHHHHhhhhhhhc
Q 012608 435 MENEAQVALKEGTTLEAKK 453 (460)
Q Consensus 435 ~~~~A~~~~~~al~l~~~~ 453 (460)
++++|+..|++|.++....
T Consensus 110 d~~~A~~~~~~Aa~~G~~~ 128 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSED 128 (133)
T ss_dssp CHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHCCCHH
Confidence 8999999999999876543
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.65 E-value=0.00015 Score=63.26 Aligned_cols=100 Identities=20% Similarity=0.110 Sum_probs=82.8
Q ss_pred HHHHhHHhhhHHHh----hCCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHh----cCChHHHHHHHHHhhhhCCcchH
Q 012608 350 ETLNSKKKGDVAFR----QKDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLM----SDMPQDALNDAMQAQIISPIWHI 421 (460)
Q Consensus 350 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~l~p~~~~ 421 (460)
....+..+|..+.. ..+...+...++++.+.. ++.+.+++|.+|.. ..+++.|+..|++|.+. +++.
T Consensus 141 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~g---~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~ 215 (265)
T d1ouva_ 141 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGG 215 (265)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred ccchhhhhhhhhccCCCcccccccchhhhhcccccc---ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHH
Confidence 44566777877775 577888999999988654 57888999999987 67899999999999998 4799
Q ss_pred HHHHHHHHHHh----cCChHHHHHHHHHhhhhhhhcc
Q 012608 422 ASYLQAAALSA----MGMENEAQVALKEGTTLEAKKN 454 (460)
Q Consensus 422 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~~ 454 (460)
+++++|.+|+. .+++++|.++|++|..+....+
T Consensus 216 a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~A 252 (265)
T d1ouva_ 216 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGA 252 (265)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHHH
Confidence 99999999986 4589999999999998866543
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.40 E-value=0.00031 Score=65.45 Aligned_cols=73 Identities=15% Similarity=0.241 Sum_probs=52.6
Q ss_pred hcccCCCCCCeEEEEEEcC--------CcEEEEEEecCCCCCCHHHHHHHHHHHhcCC-CCccceeeeEEeeCCeeEEEE
Q 012608 31 VSEHGEKAPNVVYKGKLEN--------QRRIAVKRFNRMAWPDPRQFLEEARSVGQLR-NNRLTNLLGCCCEGDERLLVA 101 (460)
Q Consensus 31 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 101 (460)
+++|+.|-...+|++...+ .+.|.+++... ....-...+|..+++.+. +.-.+++++++.. .+|+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~--~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN--PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS--CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC--cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 4678889999999998653 35677777652 233456678999999884 5445688887643 6899
Q ss_pred EcCCCCCH
Q 012608 102 EYMPNETL 109 (460)
Q Consensus 102 e~~~g~sL 109 (460)
||++|.+|
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 99998654
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.33 E-value=0.00028 Score=63.51 Aligned_cols=158 Identities=13% Similarity=0.051 Sum_probs=88.0
Q ss_pred ccCHHHHHHHhcCCcccchhc--ccCCCCCCeEEEEEEcCCcEEEEEEecCCCCCCHHHHHHHHHHHhcCCCCc--ccee
Q 012608 12 EFTLEQLKNATSGFAVENIVS--EHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDPRQFLEEARSVGQLRNNR--LTNL 87 (460)
Q Consensus 12 ~~~~~~~~~~~~~f~~~~i~~--~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~--iv~~ 87 (460)
.+|.+|+......|.--++.+ .|..|--.+.|+.+..+|+ +++|+..... +.+++..|+.++..|...+ ++..
T Consensus 2 ~ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p 78 (316)
T d2ppqa1 2 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP 78 (316)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence 468899999998886544443 3456666788999876664 7899875432 3456667777888774322 2222
Q ss_pred ee------EEeeCCeeEEEEEcCCCCCHHhhhhc--------------c-C------CCCCC------------------
Q 012608 88 LG------CCCEGDERLLVAEYMPNETLAKHLFH--------------W-E------THPMK------------------ 122 (460)
Q Consensus 88 ~~------~~~~~~~~~lv~e~~~g~sL~~~~~~--------------~-~------~~~~~------------------ 122 (460)
.. +.........++.++.|......-.. . . .....
T Consensus 79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (316)
T d2ppqa1 79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 158 (316)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence 21 11234456677777765332110000 0 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcccccccCCcEEEcCCCCeEEccCCCcc
Q 012608 123 WAMRLRVVLHLAQALEYCTS----KGRALYHDLNAYRILFDEDGNPRLSTFGLMK 173 (460)
Q Consensus 123 ~~~~~~i~~qi~~~l~~lH~----~~~iiH~Dikp~Nill~~~~~~kl~DFg~a~ 173 (460)
.......+..+...+.-.+. .| +||+|+.++||+++++...-|.||+.+.
T Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~L~~g-iIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 159 EKGLREEIRPEIDYLAAHWPKDLPAG-VIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEE-EECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred chhHHHHHHHHHHhhhccCccccccc-cccCCcchhhhhcccccceeEecccccc
Confidence 00111122222333333322 34 8999999999999988777899999764
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.18 E-value=0.00052 Score=52.94 Aligned_cols=80 Identities=15% Similarity=-0.015 Sum_probs=65.0
Q ss_pred CCHHHHHHHHHHHhhcCCCccHHHHhhHHHHHHhcCChHHHHHHHHHhhhhCCcchHHHHHHHHHHHh----cCChHHHH
Q 012608 365 KDLKDAIECYTQFIDAGTMVSPTVYARRSLCYLMSDMPQDALNDAMQAQIISPIWHIASYLQAAALSA----MGMENEAQ 440 (460)
Q Consensus 365 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~a~~~~g~~~~~----~~~~~~A~ 440 (460)
.|+++|+.+|.+|.+.+-. .+.++++. ....++++|+..++++.+. +++.+.+++|..|.. ..++++|+
T Consensus 7 kd~~~A~~~~~kaa~~g~~---~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A~ 79 (133)
T d1klxa_ 7 KDLKKAIQYYVKACELNEM---FGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 79 (133)
T ss_dssp HHHHHHHHHHHHHHHTTCT---THHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCh---hhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHHH
Confidence 5899999999999988633 44444443 4457899999999999876 689999999999876 56799999
Q ss_pred HHHHHhhhhhh
Q 012608 441 VALKEGTTLEA 451 (460)
Q Consensus 441 ~~~~~al~l~~ 451 (460)
+.|++|.+...
T Consensus 80 ~~~~~aa~~g~ 90 (133)
T d1klxa_ 80 QYYSKACGLND 90 (133)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHhhhhccCc
Confidence 99999987643
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.51 E-value=0.28 Score=32.53 Aligned_cols=32 Identities=13% Similarity=0.277 Sum_probs=26.9
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHh
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFI 378 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 378 (460)
..+-|..+-++|..+.+.|.|++||+++.+|.
T Consensus 4 PLN~AH~~~RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 4 PLNLAHQQSRRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45667788889999999999999999988875
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.54 E-value=0.26 Score=34.33 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=29.0
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA 380 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 380 (460)
....+..+..+|..+-..|+|++|+.+|.+||+.
T Consensus 11 ~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~ 44 (93)
T d1wfda_ 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4567888899999999999999999999998743
|
| >d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Vacuolar sorting protein 4b (VPS4B, SKD1 protein) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.89 E-value=0.28 Score=32.78 Aligned_cols=34 Identities=12% Similarity=0.290 Sum_probs=28.3
Q ss_pred hHHHHHHhHHhhhHHHhhCCHHHHHHHHHHHhhc
Q 012608 347 QMQETLNSKKKGDVAFRQKDLKDAIECYTQFIDA 380 (460)
Q Consensus 347 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 380 (460)
.++.+..+..+|...-+.|+|++|+.+|.+|++.
T Consensus 7 ~l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~~ 40 (77)
T d1wr0a1 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 40 (77)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4567888888999999999999999999888753
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.51 E-value=0.8 Score=30.26 Aligned_cols=23 Identities=30% Similarity=0.239 Sum_probs=11.1
Q ss_pred HHHHHHHhcCChHHHHHHHHHhh
Q 012608 425 LQAAALSAMGMENEAQVALKEGT 447 (460)
Q Consensus 425 ~~g~~~~~~~~~~~A~~~~~~al 447 (460)
+++..+...|+|++|++++++|.
T Consensus 13 RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 13 RRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Confidence 44444455555555555444443
|